BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1955
(512 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242008773|ref|XP_002425174.1| DNA mismatch repair protein MlH1, putative [Pediculus humanus
corporis]
gi|212508876|gb|EEB12436.1| DNA mismatch repair protein MlH1, putative [Pediculus humanus
corporis]
Length = 657
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 233/350 (66%), Gaps = 41/350 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P IKKLDE V+NRIAAGEVIQRP NALKEL+ENS+DAKS+ IQ+TVK GGLKLLQI
Sbjct: 1 MSVAPSIKKLDEAVINRIAAGEVIQRPYNALKELIENSIDAKSSKIQITVKDGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---- 116
DNGTGIRKED+DIVCERFTTSKL++FEDL IST+GFRGEALASISHVAHLTI+T
Sbjct: 61 SDNGTGIRKEDLDIVCERFTTSKLSKFEDLTKISTYGFRGEALASISHVAHLTIVTKTAD 120
Query: 117 --------------KTKTSPCAYRWCTYL------------ADLMALALMEMSQYLQR-D 149
K PCA T + + + E S+ L
Sbjct: 121 NQCGYKASYVDSKLKNPPKPCAVEKGTQIIVEELFYNVPTRKNALKSPAEEYSKVLDVVR 180
Query: 150 KEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDA 209
K I + + + + TL + Q S V+ L+ AS+ ELL V+ +DD
Sbjct: 181 KYAIHNSKIAFSLKKHKETLSDVNTPQNSTS---VDNIRLIYGASIAK-ELLEVKDSDDT 236
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ +V G ITNVN+S KK TFLLFIN+ +K +IEQVYSIYLPK ++PFVYLSL
Sbjct: 237 LKFQVQGQITNVNYSNKKFTFLLFINDRLVNSSSLKSIIEQVYSIYLPKNNYPFVYLSLT 296
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ P+N+DVNVHPTKHEVHFLHE+ I+ +++++ EKTLLGSNTSR+FYTQS
Sbjct: 297 ICPENIDVNVHPTKHEVHFLHEENIVNKIKAIFEKTLLGSNTSRIFYTQS 346
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 122/186 (65%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+S+ IQ+TVK GGLKLLQI DNGTGIRKED+DIVCERFTTSKL++FEDL IST+GFRGE
Sbjct: 42 KSSKIQITVKDGGLKLLQISDNGTGIRKEDLDIVCERFTTSKLSKFEDLTKISTYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAHLTI+TKT + C Y+ASY+DSKLK+P KPCA +GTQII E+LFYN+PTR
Sbjct: 102 ALASISHVAHLTIVTKTADNQCGYKASYVDSKLKNPPKPCAVEKGTQIIVEELFYNVPTR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
+ ALK P+EEY+K+ DVV +YA+HN + F+LKK E L+D+ T NS+ + I IYG
Sbjct: 162 KNALKSPAEEYSKVLDVVRKYAIHNSKIAFSLKKHKETLSDVNTPQNSTSVDNIRLIYGA 221
Query: 492 NISRRV 497
+I++ +
Sbjct: 222 SIAKEL 227
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 141 EMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
E+SQ+ + E++ +W T EH L+ M+S QP +K ++ +LEIA+L +L
Sbjct: 593 EISQFYCKIPEEVPIPGFNEWKWTTEHVLLSEMRSSLQPPKKFMKDGTILEIANLPDL 650
>gi|444526303|gb|ELV14290.1| DNA mismatch repair protein Mlh1 [Tupaia chinensis]
Length = 705
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/313 (55%), Positives = 221/313 (70%), Gaps = 34/313 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKEDMDIVCERFTTSKL FEDL +IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDMDIVCERFTTSKLQTFEDLANISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVER 186
+ + + + S +++ E + D RT+ PS V+
Sbjct: 128 YAIHNSGI--------SFSVKKQGETVAD------VRTL-------------PSATTVDN 160
Query: 187 ACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKR 240
+ + + EL+ V D K++G+I+N N+S KK FLLFIN+ +++
Sbjct: 161 IRSI-FGNAVSRELIEVGCEDKTLAFKMSGYISNANYSVKKCIFLLFINHRLVESTSLRK 219
Query: 241 MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
IE VY+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E L
Sbjct: 220 AIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESQL 279
Query: 301 LGSNTSRVFYTQS 313
LGSN+SR+++TQ+
Sbjct: 280 LGSNSSRLYFTQT 292
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 111/186 (59%), Gaps = 55/186 (29%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKEDMDIVCERFTTSKL FEDL +IST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDMDIVCERFTTSKLQTFEDLANISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT+ D K CA
Sbjct: 103 ALASISHVAHVTIT--TKTA---------DGK-------CA------------------- 125
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RYA+HN + F++KKQ E +AD+RT +++ + I +I+GN
Sbjct: 126 ------------------YRYAIHNSGISFSVKKQGETVADVRTLPSATTVDNIRSIFGN 167
Query: 492 NISRRV 497
+SR +
Sbjct: 168 AVSREL 173
>gi|302148833|pdb|3NA3|A Chain A, Mutl Protein Homolog 1 Isoform 1 From Homo Sapiens
Length = 348
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 9 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 69 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 128
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 129 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 188
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 189 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 246
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 247 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 306
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 307 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 348
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 44 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 103
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 104 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 163
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 164 RKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 223
Query: 492 NISRRV 497
+SR +
Sbjct: 224 AVSREL 229
>gi|355702650|gb|AES02002.1| mutL-like protein 1, colon cancer, nonpolyposis type 2 [Mustela
putorius furo]
Length = 757
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 203/457 (44%), Positives = 266/457 (58%), Gaps = 61/457 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADAKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNASEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEIGPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS-------TSIQVTVKQGG 324
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+ S +V G
Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTG 365
Query: 325 LKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 384
+ NG + M R KL F L +S +AL+S I
Sbjct: 366 VTPSSASGNGDKVYAHQMVRTDSR--EQKLDAF--LQPMS------KALSSQPEA----I 411
Query: 385 ITKTKTSPCAYRASYIDS---KLKDPIKPCAGNQGTQ 418
+ + +T + R D +L +P + A NQGT+
Sbjct: 412 VPQDRTDASSGRPGQQDEEMLELPEPAQASATNQGTE 448
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADAKCAYRANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK SEEY KI +VV RY++HN + F++KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNASEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|73989704|ref|XP_534219.2| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Canis lupus
familiaris]
Length = 757
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/344 (52%), Positives = 229/344 (66%), Gaps = 41/344 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127
Query: 127 WCTY---------------------LADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
TY + DL + + L+ E+ G E ++
Sbjct: 128 -ATYSDGKLKAPPKPCAGNQGTQITVEDLF-YNISTRRKALKNPSEEYGKILEVVGRYSI 185
Query: 166 EHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVT 215
++ + S + E + + L +++N+ EL+ V D K+
Sbjct: 186 HNSGISF--SVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMN 243
Query: 216 GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NV
Sbjct: 244 GYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNV 303
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 304 DVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTAEAKCAYRATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|410971723|ref|XP_003992314.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 4 [Felis catus]
Length = 689
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAK+TSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKATSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADAKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLTAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGIGF--SVKKQGETVADVRTLPSATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGF 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++TSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KATSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRASY D KL P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADAKCAYRASYSDGKLTAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN +GF++KKQ E +AD+RT +++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGIGFSVKKQGETVADVRTLPSATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|148229904|ref|NP_001090545.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Xenopus laevis]
gi|117167959|gb|AAI24967.1| LOC100036779 protein [Xenopus laevis]
Length = 750
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/340 (52%), Positives = 228/340 (67%), Gaps = 33/340 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L+ETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQVTVK GG+KL+QIQDNGTG
Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL++IST+GFRGEALAS+SHVAH+TI TKT CAYR
Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASVSHVAHVTITTKTADGKCAYR 124
Query: 127 WCTYLADLMA----LALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---- 177
L A A + +Q D + + + + EH + + S+Y
Sbjct: 125 ASYADGKLKAPPKPCAGNQGTQISVEDLFYNVSTRRKALKSPSEEHARIVEVVSRYAIHN 184
Query: 178 --------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWIT 219
+ E + + L +++N+ EL+ V +D K+ G++T
Sbjct: 185 SGIGFSVKKQGETMADVRTLSNATTVDNIRTVFGNAVSRELIGVGCEEDKLAFKMKGYVT 244
Query: 220 NVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N N+S KK FLLFIN +K+ IE VY+ YLPK + PF+YLSL + P+NVDVNV
Sbjct: 245 NANYSMKKCIFLLFINARLVESTALKKAIETVYAAYLPKNTHPFLYLSLDIAPQNVDVNV 304
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
HPTKHEVHFLHED+IIERVQ +E LLGSN+SR+++TQ+
Sbjct: 305 HPTKHEVHFLHEDSIIERVQQHIESKLLGSNSSRMYFTQT 344
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 155/186 (83%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQVTVK GG+KL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL++IST+GFRGE
Sbjct: 40 KSTSIQVTVKDGGMKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALAS+SHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYN+ TR
Sbjct: 100 ALASVSHVAHVTITTKTADGKCAYRASYADGKLKAPPKPCAGNQGTQISVEDLFYNVSTR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEE+ +I +VVSRYA+HN +GF++KKQ E +AD+RT N++ + I ++GN
Sbjct: 160 RKALKSPSEEHARIVEVVSRYAIHNSGIGFSVKKQGETMADVRTLSNATTVDNIRTVFGN 219
Query: 492 NISRRV 497
+SR +
Sbjct: 220 AVSREL 225
>gi|301757691|ref|XP_002914683.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Ailuropoda
melanoleuca]
Length = 757
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 202/458 (44%), Positives = 268/458 (58%), Gaps = 62/458 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADAKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L ++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPSATRVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS-------TSIQVTVKQGG 324
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+ +S++V G
Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGSSVEVVKSTTG 365
Query: 325 LKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 384
+ G+G + +V KL F L +S +AL+S I
Sbjct: 366 VT---PSSTGSGDKVYAHQMVRTDSREQKLDAF--LQPMS------KALSSQPQA----I 410
Query: 385 ITKTKTSPCAYRASYIDS---KLKDPIKPCAGNQGTQI 419
+ + +T + A D +L +P A NQGT++
Sbjct: 411 VPEDRTDASSGGAGQQDEEMLELPEPAHVAATNQGTEV 448
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADAKCAYRANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT +++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPSATRVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|410971717|ref|XP_003992311.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Felis catus]
Length = 758
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAK+TSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKATSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADAKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLTAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGIGF--SVKKQGETVADVRTLPSATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGF 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/187 (69%), Positives = 154/187 (82%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++TSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKATSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT + CAYRASY D KL P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADAKCAYRASYSDGKLTAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN +GF++KKQ E +AD+RT +++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGIGFSVKKQGETVADVRTLPSATTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|109042257|ref|XP_001087274.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Macaca mulatta]
Length = 583
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L + + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|384871676|ref|NP_001245200.1| DNA mismatch repair protein Mlh1 isoform 4 [Homo sapiens]
Length = 687
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|395816710|ref|XP_003781838.1| PREDICTED: DNA mismatch repair protein Mlh1 [Otolemur garnettii]
Length = 757
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 228/343 (66%), Gaps = 39/343 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLHSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVP-LMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
+ + L+K Q E + + L +++N+ EL+ V+ D K+ G
Sbjct: 188 SGISFLVKKQ---GETVADVRTLPNATTVDNIRSIFGNAVSRELIEVDCEDKTLAFKMHG 244
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 245 YISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVD 304
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 305 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLHSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F +KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFLVKKQGETVADVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|441610840|ref|XP_004087974.1| PREDICTED: DNA mismatch repair protein Mlh1 [Nomascus leucogenys]
Length = 687
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/186 (71%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|148677028|gb|EDL08975.1| mutL homolog 1 (E. coli), isoform CRA_a [Mus musculus]
Length = 640
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|397511602|ref|XP_003826159.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Pan
paniscus]
gi|410036691|ref|XP_003950103.1| PREDICTED: DNA mismatch repair protein Mlh1 [Pan troglodytes]
Length = 687
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/186 (71%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|148677029|gb|EDL08976.1| mutL homolog 1 (E. coli), isoform CRA_b [Mus musculus]
Length = 673
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 28 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 87
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 88 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 147
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 148 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 207
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 208 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 265
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 266 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 325
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 326 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 367
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 63 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 122
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 123 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 182
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 183 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 242
Query: 492 NISRRV 497
+SR +
Sbjct: 243 AVSREL 248
>gi|426339907|ref|XP_004033879.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Gorilla
gorilla gorilla]
Length = 687
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/186 (71%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|298160978|ref|NP_001165838.1| DNA mismatch repair protein Mlh1 [Sus scrofa]
gi|285818446|gb|ADC38896.1| mutL-like protein 1 [Sus scrofa]
Length = 757
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 226/355 (63%), Gaps = 37/355 (10%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDN
Sbjct: 5 PGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDN 64
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
GTGIRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+ I TKT C
Sbjct: 65 GTGIRKEDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVAITTKTADGKC 124
Query: 124 AYRWCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRT 164
AYR L A + + L+ E+ G E +
Sbjct: 125 AYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYS 184
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKV 214
+ ++ + S + E + + L +++N+ EL+ VE D K+
Sbjct: 185 IHNSGISF--SVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECEDKTLAFKM 242
Query: 215 TGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+N
Sbjct: 243 NGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQN 302
Query: 269 VDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
VDVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN SR ++TQ+ +T G
Sbjct: 303 VDVNVHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQTLLPGLTGPSG 357
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 150/187 (80%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLAHISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+ I TKT CAYRA Y D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVAITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|604369|gb|AAA85687.1| hMLH1 [Homo sapiens]
Length = 752
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|26332473|dbj|BAC29954.1| unnamed protein product [Mus musculus]
Length = 653
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE+++++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESVLQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|189069159|dbj|BAG35497.1| unnamed protein product [Homo sapiens]
Length = 756
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|48476966|gb|AAT44531.1| hypothetical rhabdomyosarcoma antigen MU-RMS-40.5 [Homo sapiens]
Length = 755
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 7 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 67 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 126
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 127 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 186
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 187 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 244
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 245 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 304
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 305 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 346
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 41 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 100
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 101 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 160
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 161 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 220
Query: 491 NNISRRV 497
N +SR +
Sbjct: 221 NAVSREL 227
>gi|466462|gb|AAA17374.1| human homolog of E. coli mutL gene product, Swiss-Prot Accession
Number P23367 [Homo sapiens]
gi|261858940|dbj|BAI45992.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [synthetic
construct]
Length = 756
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSVFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +++G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSVFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|33303773|gb|AAQ02400.1| mutL-like 1, colon cancer, nonpolyposis type 2, partial [synthetic
construct]
Length = 757
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|4557757|ref|NP_000240.1| DNA mismatch repair protein Mlh1 isoform 1 [Homo sapiens]
gi|730028|sp|P40692.1|MLH1_HUMAN RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL
protein homolog 1
gi|463989|gb|AAC50285.1| DNA mismatch repair protein homolog [Homo sapiens]
gi|1079787|gb|AAA82079.1| DNA mismatch repair protein homolog [Homo sapiens]
gi|13905126|gb|AAH06850.1| MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Homo
sapiens]
gi|27805155|gb|AAO22994.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Homo
sapiens]
gi|119584889|gb|EAW64485.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli),
isoform CRA_b [Homo sapiens]
gi|157928134|gb|ABW03363.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
[synthetic construct]
gi|157928839|gb|ABW03705.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
[synthetic construct]
gi|741682|prf||2007430A DNA mismatch repair protein
Length = 756
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|344249529|gb|EGW05633.1| DNA mismatch repair protein Mlh1 [Cricetulus griseus]
Length = 720
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A +M + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADIRTLPNATTVDNIRSIFGSAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHVEGKLLGSNSSRMYFTQT 347
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/187 (69%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTNIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +ADIRT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADIRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
+ +SR +
Sbjct: 222 SAVSREL 228
>gi|431919450|gb|ELK17969.1| DNA mismatch repair protein Mlh1 [Pteropus alecto]
Length = 786
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPGATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMKGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEDSILDRVQQHIESKLLGSNSSRMYFTQT 347
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT ++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPGATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|149018395|gb|EDL77036.1| rCG26088 [Rattus norvegicus]
Length = 765
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 15 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 74
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 75 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 134
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 135 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 194
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 195 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 252
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +K+ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 253 ISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLSLEISPQNVDV 312
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 313 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 354
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 49 AKSTNIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRG 108
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI T
Sbjct: 109 EALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIIT 168
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+G
Sbjct: 169 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFG 228
Query: 491 NNISRRV 497
N +SR +
Sbjct: 229 NAVSREL 235
>gi|426339905|ref|XP_004033878.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Gorilla
gorilla gorilla]
Length = 756
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|332215524|ref|XP_003256894.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Nomascus
leucogenys]
Length = 756
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|354489134|ref|XP_003506719.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cricetulus
griseus]
Length = 751
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A +M + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADIRTLPNATTVDNIRSIFGSAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHVEGKLLGSNSSRMYFTQT 347
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/187 (69%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTNIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +ADIRT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADIRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
+ +SR +
Sbjct: 222 SAVSREL 228
>gi|296228349|ref|XP_002759776.1| PREDICTED: DNA mismatch repair protein Mlh1 [Callithrix jacchus]
Length = 758
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L ++++N+ EL+ + D ++ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPSASTVDNIRSIFGNAVSRELIEIGCEDKTLAFRMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT ++S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPSASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|114585960|ref|XP_001170433.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 8 [Pan
troglodytes]
gi|397511600|ref|XP_003826158.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Pan
paniscus]
gi|410211744|gb|JAA03091.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Pan troglodytes]
gi|410260672|gb|JAA18302.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Pan troglodytes]
gi|410291716|gb|JAA24458.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Pan troglodytes]
Length = 756
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|149729634|ref|XP_001489268.1| PREDICTED: DNA mismatch repair protein Mlh1 [Equus caballus]
Length = 758
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 224/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV +K+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVIKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLAKISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLGFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV +K+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTSIQVVIKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLAKISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRANYSDGKLKAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|402860651|ref|XP_003894737.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Papio
anubis]
Length = 687
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L + + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|18255308|gb|AAH21815.1| MutL homolog 1 (E. coli) [Mus musculus]
Length = 760
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 227/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISI--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 151/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + ++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISISVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|403278755|ref|XP_003930956.1| PREDICTED: DNA mismatch repair protein Mlh1 [Saimiri boliviensis
boliviensis]
Length = 758
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IR+ED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRREDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L ++++N+ EL+ + D ++ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFRMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIR+ED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRREDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|291399797|ref|XP_002716213.1| PREDICTED: MutL protein homolog 1 [Oryctolagus cuniculus]
Length = 758
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 224/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTSDGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADVRTLPGATTVDNIRSIFGNAVSRELIEVGCEDPTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +K+ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLKKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILARVQQHIESKLLGSNSSRMYFTQT 347
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTSDGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT ++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPGATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|148677030|gb|EDL08977.1| mutL homolog 1 (E. coli), isoform CRA_c [Mus musculus]
Length = 760
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|7595954|gb|AAF64514.1|AF250844_1 MutL homolog 1 protein [Mus musculus]
Length = 760
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|255958238|ref|NP_081086.2| DNA mismatch repair protein Mlh1 [Mus musculus]
gi|341940957|sp|Q9JK91.2|MLH1_MOUSE RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL
protein homolog 1
gi|74223060|dbj|BAE40671.1| unnamed protein product [Mus musculus]
Length = 760
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQT 347
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|348575486|ref|XP_003473519.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cavia porcellus]
Length = 758
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 224/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTTDGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNITTRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L ++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADIRTLSGATVVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIEMVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLG+N+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGANSSRMYFTQT 347
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTTDGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNITT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +ADIRT ++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNSGISFSVKKQGETVADIRTLSGATVVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|380812894|gb|AFE78321.1| DNA mismatch repair protein Mlh1 isoform 1 [Macaca mulatta]
gi|383418489|gb|AFH32458.1| DNA mismatch repair protein Mlh1 isoform 1 [Macaca mulatta]
gi|384947140|gb|AFI37175.1| DNA mismatch repair protein Mlh1 isoform 1 [Macaca mulatta]
Length = 756
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L + + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|301607766|ref|XP_002933455.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1
[Xenopus (Silurana) tropicalis]
Length = 746
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 226/339 (66%), Gaps = 33/339 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L+ETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQVTVK GG+KL+QIQDNGTG
Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL++IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASISHVAHVTITTKTADGKCAYR 124
Query: 127 WCTYLADLMA----LALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---- 177
L A + +Q D I + + + EH + + S+Y
Sbjct: 125 ASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTRRKALKSPSEEHARIVEVVSRYAIHN 184
Query: 178 --------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWIT 219
+ E + + L +++N+ EL+ V ++ K+ G++T
Sbjct: 185 SGISFSVKKQGETMADVRTLSNATTVDNIRTVFGNAVSRELIEVGCEEEKLAFKMKGYVT 244
Query: 220 NVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N N+S KK FLLFIN +K+ IE VY+ YLPK + PF+YLSL + P+NVDVNV
Sbjct: 245 NANYSMKKCIFLLFINARLVESTALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNVDVNV 304
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
HPTKHEVHFLHED+IIERVQ +E LLGSN+SR+++TQ
Sbjct: 305 HPTKHEVHFLHEDSIIERVQQHIESKLLGSNSSRMYFTQ 343
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQVTVK GG+KL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL++IST+GFRGE
Sbjct: 40 KSTSIQVTVKDGGMKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 100 ALASISHVAHVTITTKTADGKCAYRASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEE+ +I +VVSRYA+HN + F++KKQ E +AD+RT N++ + I ++GN
Sbjct: 160 RKALKSPSEEHARIVEVVSRYAIHNSGISFSVKKQGETMADVRTLSNATTVDNIRTVFGN 219
Query: 492 NISRRV 497
+SR +
Sbjct: 220 AVSREL 225
>gi|402860649|ref|XP_003894736.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Papio
anubis]
Length = 756
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L + + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|355559788|gb|EHH16516.1| hypothetical protein EGK_11805 [Macaca mulatta]
gi|355746819|gb|EHH51433.1| hypothetical protein EGM_10801 [Macaca fascicularis]
Length = 756
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L + + + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|281485557|ref|NP_001069462.2| DNA mismatch repair protein Mlh1 [Bos taurus]
gi|296475135|tpg|DAA17250.1| TPA: mutL homolog 1, colon cancer, nonpolyposis type 2 [Bos taurus]
Length = 758
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 222/342 (64%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED++IVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E V +
Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYAVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ VE D K+ G+
Sbjct: 188 SGIGF--SVKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I+ER+Q +E LLGSN SR ++TQ+
Sbjct: 306 NVHPTKHEVHFLHEDSILERLQQHIESRLLGSNASRTYFTQT 347
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED++IVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRA Y D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RYAVHN +GF++KKQ E +AD+RT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYAVHNSGIGFSVKKQGETVADVRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|62897179|dbj|BAD96530.1| MutL protein homolog 1 variant [Homo sapiens]
Length = 756
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 224/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTS QV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSTQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E +V +
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ S + E + + L ++++N+ EL+ + D K+ G+
Sbjct: 188 AGISF--SVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STS QV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRG
Sbjct: 42 AKSTSTQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|183582329|dbj|BAG28292.1| mismatch repair protein [Mesocricetus auratus]
Length = 758
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLARISTYGFRGEALASISHVAHVTITTKTDDGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A +M + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMTRRKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVADIRTLPNATTVDNIRSIFGSAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLH+++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHDESILERVQQHIEGKLLGSNSSRMYFTQT 347
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTNIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLARISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTDDGKCAYRASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +ADIRT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADIRTLPNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
+ +SR +
Sbjct: 222 SAVSREL 228
>gi|390340605|ref|XP_793318.3| PREDICTED: DNA mismatch repair protein Mlh1 [Strongylocentrotus
purpuratus]
Length = 748
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/372 (48%), Positives = 233/372 (62%), Gaps = 38/372 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KLDETVVNRIAAGEVIQRPANALKE++EN LDAKSTSIQVTVK GG+KLLQIQDNGTG
Sbjct: 5 IRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSIQVTVKSGGMKLLQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK+DMDIVCERFTTSKL +F DL SIST+GFRGEALASISHVAH+TI+T+T+ S CAY+
Sbjct: 65 IRKDDMDIVCERFTTSKLREFNDLTSISTYGFRGEALASISHVAHVTIVTRTEDSKCAYK 124
Query: 127 WCTYLADLMA----LALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---- 177
L A A +Q D + + + + EH + + S+Y
Sbjct: 125 GNFSDGKLKAAIKPCAGNRGTQITVEDLFYNVATRRKALKSASEEHNKISEVVSRYAIHN 184
Query: 178 --------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWIT 219
+ E + ++++N+ ELL + + K++G I+
Sbjct: 185 AGVAFTLKKSGESTADVRTSQNASTVDNIRSVFGPTVARELLEINHENSGLGFKLSGQIS 244
Query: 220 NVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N N+S K++ FLLFIN+ +++ IE VYS YLPK + PF+Y SL + P NVDVNV
Sbjct: 245 NANYSVKRLIFLLFINHRLVDSSSLRKAIEAVYSTYLPKNAHPFIYFSLEIAPHNVDVNV 304
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDN 333
HPTKHEVHFLHE+ IIE +Q LE+ LLG N+SR ++TQ+ + L + +D
Sbjct: 305 HPTKHEVHFLHEEAIIEDIQKCLEQKLLGCNSSRTYFTQA-----LLPGSNLSIADDEDK 359
Query: 334 GTGIRKEDMDIV 345
G R D V
Sbjct: 360 SKGQRSSSTDQV 371
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 156/186 (83%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQVTVK GG+KLLQIQDNGTGIRK+DMDIVCERFTTSKL +F DL SIST+GFRGE
Sbjct: 40 KSTSIQVTVKSGGMKLLQIQDNGTGIRKDDMDIVCERFTTSKLREFNDLTSISTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI+T+T+ S CAY+ ++ D KLK IKPCAGN+GTQI EDLFYN+ TR
Sbjct: 100 ALASISHVAHVTIVTRTEDSKCAYKGNFSDGKLKAAIKPCAGNRGTQITVEDLFYNVATR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK SEE+NKI++VVSRYA+HN V FTLKK E+ AD+RT+ N+S + I +++G
Sbjct: 160 RKALKSASEEHNKISEVVSRYAIHNAGVAFTLKKSGESTADVRTSQNASTVDNIRSVFGP 219
Query: 492 NISRRV 497
++R +
Sbjct: 220 TVAREL 225
>gi|348507441|ref|XP_003441264.1| PREDICTED: DNA mismatch repair protein Mlh1 [Oreochromis niloticus]
Length = 735
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 224/341 (65%), Gaps = 35/341 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQVTVK GGLKLLQIQDNGTG
Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTSIQVTVKDGGLKLLQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKEDM+IVCERFTTSKL FEDL+SI+T+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 65 IRKEDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 124
Query: 127 WCTYLADLMA----LALMEMSQYLQRD-------KEQIGDKEEKQWYRTVE-------HT 168
L A + +Q L D + + ++ R VE H
Sbjct: 125 ANYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVEVVGRYAIHN 184
Query: 169 LVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWI 218
+ Q E + + L + ++N+ EL+ V D K+ G+I
Sbjct: 185 SGKSFSVKKQ-GETVADVRTLPNASVVDNIRGIFGNAVSRELIEVACEDQKLAYKMKGYI 243
Query: 219 TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+N N+S KK +LFIN+ +K+ IE VY+ YLPK + PF+YLSL + P+NVDVN
Sbjct: 244 SNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNVDVN 303
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VHPTKHEVHFLHED++IE VQ +E LLGSN+SR ++TQ+
Sbjct: 304 VHPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQT 344
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 155/186 (83%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQVTVK GGLKLLQIQDNGTGIRKEDM+IVCERFTTSKL FEDL+SI+T+GFRGE
Sbjct: 40 KSTSIQVTVKDGGLKLLQIQDNGTGIRKEDMEIVCERFTTSKLQTFEDLSSIATYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGTQI+ EDLFYN+ TR
Sbjct: 100 ALASISHVAHVTITTKTADAKCAYRANYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PS+EY++I +VV RYA+HN F++KKQ E +AD+RT N+S + I I+GN
Sbjct: 160 RKALKSPSDEYSRIVEVVGRYAIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGIFGN 219
Query: 492 NISRRV 497
+SR +
Sbjct: 220 AVSREL 225
>gi|328697305|ref|XP_001945011.2| PREDICTED: DNA mismatch repair protein Mlh1-like [Acyrthosiphon
pisum]
Length = 677
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 230/354 (64%), Gaps = 48/354 (13%)
Query: 1 MDQP-PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQ 59
MDQ P ++KL E VVNRIAAGEVIQRPANALKELLENSLDAKST+IQVT+K GGLKLLQ
Sbjct: 1 MDQQVPIVRKLAEDVVNRIAAGEVIQRPANALKELLENSLDAKSTNIQVTLKNGGLKLLQ 60
Query: 60 IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
IQDNGTGIR ED+ IVCERFTTSKL QFEDL IST+GFRGEALASISHVAHLTI TKT
Sbjct: 61 IQDNGTGIRTEDLGIVCERFTTSKLQQFEDLTKISTYGFRGEALASISHVAHLTITTKTN 120
Query: 120 TSPCAYRWCTYLADLMA------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
+ CAY+ L A + + ++ + K+ + E EH
Sbjct: 121 GALCAYKGLYKDGKLKAPPKSCAGNVGTIITVEDLFHNIATRKKSMKSFNE-------EH 173
Query: 168 TLVPLMKSQYQPSEKIV------ERACLLEIAS------LNNLE----------LLSVEG 205
V + S+Y +V + L E+ + ++N++ LL V
Sbjct: 174 LKVVEVVSRYAIHNPLVGFTVKKQGELLTEVKTNQGSTHIDNIQAIYGSAISRALLEVND 233
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+ ++K+ G+++N NFS KK F+LFIN+ +++ ++QVYSIYL KGS PF+Y
Sbjct: 234 NCNILKVKIKGYVSNPNFSAKKQIFILFINDRLVDSQGLRKAVDQVYSIYLAKGSHPFIY 293
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL +DP NVDVNVHPTKHEVHFLHED +I++V ++ L G+NTSR FYTQ+
Sbjct: 294 LSLNLDPMNVDVNVHPTKHEVHFLHEDKVIDKVVDAIQDKLSGTNTSRTFYTQT 347
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 157/208 (75%), Gaps = 5/208 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R + L++ L S +ST+IQVT+K GGLKLLQIQDNGTGIR ED+ IVCE
Sbjct: 24 VIQRPANALKELLENS-----LDAKSTNIQVTLKNGGLKLLQIQDNGTGIRTEDLGIVCE 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL QFEDL IST+GFRGEALASISHVAHLTI TKT + CAY+ Y D KLK P
Sbjct: 79 RFTTSKLQQFEDLTKISTYGFRGEALASISHVAHLTITTKTNGALCAYKGLYKDGKLKAP 138
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
K CAGN GT I EDLF+NI TR+K++K +EE+ K+ +VVSRYA+HNP VGFT+KKQ
Sbjct: 139 PKSCAGNVGTIITVEDLFHNIATRKKSMKSFNEEHLKVVEVVSRYAIHNPLVGFTVKKQG 198
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
E L +++TN S+H + I IYG+ ISR
Sbjct: 199 ELLTEVKTNQGSTHIDNIQAIYGSAISR 226
>gi|351708850|gb|EHB11769.1| DNA mismatch repair protein Mlh1 [Heterocephalus glaber]
Length = 758
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 226/343 (65%), Gaps = 39/343 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED++IVCERFTTSKL FEDL +IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLATISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMALA--------------------LMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
+Y M + + + L+ E+ G E ++
Sbjct: 128 -ASYSDGKMKASPKPCAGNQGTQITVEDLFYNITTRRKALKNPSEEYGKILEVVGRYSIH 186
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
++ V S + E + + L ++N+ EL+ V D K+ G
Sbjct: 187 NSGVSF--SVKKQGETVADIRTLSSATIVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNG 244
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 245 YISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVD 304
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTKHEVHFLHE++I+ERVQ +E LLG+N+SR+++TQ+
Sbjct: 305 VNVHPTKHEVHFLHEESILERVQQHIESKLLGANSSRMYFTQT 347
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED++IVCERFTTSKL FEDL +IST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQSFEDLATISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D K+K KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKMKASPKPCAGNQGTQITVEDLFYNITTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN V F++KKQ E +ADIRT +++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGVSFSVKKQGETVADIRTLSSATIVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|41054934|ref|NP_956953.1| DNA mismatch repair protein Mlh1 [Danio rerio]
gi|34785440|gb|AAH57507.1| MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Danio
rerio]
Length = 724
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/341 (51%), Positives = 227/341 (66%), Gaps = 35/341 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGE+IQRPANA+KE++EN LDAKST+IQ+TVK+GGLKL+ IQDNGTG
Sbjct: 5 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK+DM+IVCERFTTSKL F+DL+SI+T+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 65 IRKDDMEIVCERFTTSKLKSFDDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 124
Query: 127 --WC---------TYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE-------HT 168
+C + L +E Y + + +++ R VE H
Sbjct: 125 ANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIHN 184
Query: 169 LVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWI 218
+ Q E + + L + L+N+ EL+ VE D F KV G+I
Sbjct: 185 SGKSFSVKKQ-GEMVADVKTLPNASVLDNIRVVFGVAVSRELIEVECEDQKFAFKVKGYI 243
Query: 219 TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+N N+S KK +LFIN+ +K+ IE VY+ YLPK + PF+YLSL + P+N+DVN
Sbjct: 244 SNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDVN 303
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VHPTKHEVHFLHED+IIE +Q +E LLGSN+SR ++TQ+
Sbjct: 304 VHPTKHEVHFLHEDSIIESIQKHIENKLLGSNSSRTYFTQT 344
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 153/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQ+TVK+GGLKL+ IQDNGTGIRK+DM+IVCERFTTSKL F+DL+SI+T+GFRG
Sbjct: 39 AKSTNIQITVKEGGLKLILIQDNGTGIRKDDMEIVCERFTTSKLKSFDDLSSIATYGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGT I EDLFYN+ T
Sbjct: 99 EALASISHVAHVTITTKTADAKCAYRANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVST 158
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY++I +VVSRYA+HN F++KKQ E +AD++T N+S + I ++G
Sbjct: 159 RRKALKSPSEEYSRIVEVVSRYAIHNSGKSFSVKKQGEMVADVKTLPNASVLDNIRVVFG 218
Query: 491 NNISRRV 497
+SR +
Sbjct: 219 VAVSREL 225
>gi|156380669|ref|XP_001631890.1| predicted protein [Nematostella vectensis]
gi|156218938|gb|EDO39827.1| predicted protein [Nematostella vectensis]
Length = 742
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 222/354 (62%), Gaps = 50/354 (14%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+KLDETVVNRIAAGEVIQRPANALKE++EN LDAKSTSI VTVK GGLKLLQIQDNG
Sbjct: 5 PSIRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSITVTVKSGGLKLLQIQDNG 64
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GIRKEDM IVCERFTTSKL++FEDL+SIST+GFRGEALASISHVAH+TI TKT A
Sbjct: 65 CGIRKEDMHIVCERFTTSKLSKFEDLSSISTYGFRGEALASISHVAHVTITTKT-----A 119
Query: 125 YRWCTYLADLMALALMEMSQYLQRD-KEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSE-- 181
+ C Y A L+ L + K G+K + + + + K+ P E
Sbjct: 120 HSSCAYKASYSDGKLVPPRPGLPAEPKPCAGNKGTQITVEDLFYNVATRRKALKSPGEEY 179
Query: 182 -KIVERACLLEI------------------------ASLNN-----------LELLSVEG 205
K+V+ I ASL++ EL+ ++
Sbjct: 180 SKVVDVVSKYSIHNTGVAFTLKKQGEATADVRTTSTASLHDNIRAIYGTAVARELVDIDC 239
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+ + G ITN N+S KK+ FLLFIN+ ++R +E VY YLPKG+ PFVY
Sbjct: 240 DNSRLGFYMKGCITNANYSVKKLIFLLFINHRLVDSTALRRSLETVYEAYLPKGTHPFVY 299
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+SL + P NVDVNVHPTKHEVHFLHED I+E VQ +E LLG NTSR FYTQ+
Sbjct: 300 MSLQITPSNVDVNVHPTKHEVHFLHEDAIVEAVQKCVEMKLLGCNTSRTFYTQA 353
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 150/193 (77%), Gaps = 7/193 (3%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSI VTVK GGLKLLQIQDNG GIRKEDM IVCERFTTSKL++FEDL+SIST+GFRGE
Sbjct: 42 KSTSITVTVKSGGLKLLQIQDNGCGIRKEDMHIVCERFTTSKLSKFEDLSSISTYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDL 424
ALASISHVAH+TI TKT S CAY+ASY D KL P KPCAGN+GTQI EDL
Sbjct: 102 ALASISHVAHVTITTKTAHSSCAYKASYSDGKLVPPRPGLPAEPKPCAGNKGTQITVEDL 161
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+ TRRKALK P EEY+K+ DVVS+Y++HN V FTLKKQ E AD+RT +S +
Sbjct: 162 FYNVATRRKALKSPGEEYSKVVDVVSKYSIHNTGVAFTLKKQGEATADVRTTSTASLHDN 221
Query: 485 IGNIYGNNISRRV 497
I IYG ++R +
Sbjct: 222 IRAIYGTAVAREL 234
>gi|91088905|ref|XP_972898.1| PREDICTED: similar to Mlh1 CG11482-PA [Tribolium castaneum]
gi|270011580|gb|EFA08028.1| hypothetical protein TcasGA2_TC005617 [Tribolium castaneum]
Length = 648
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 227/350 (64%), Gaps = 42/350 (12%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++P +IKKLDE V+NRIAAGE+IQRPANALKE++ENSLDA ST+IQ+TVK GGLKLLQI
Sbjct: 1 MEEPKEIKKLDEAVINRIAAGEIIQRPANALKEMIENSLDAHSTNIQITVKNGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRK+D IVCERFTTSKL +F+DL +I+T+GFRGEALASISH+AHLTI++KT
Sbjct: 61 QDNGTGIRKDDFAIVCERFTTSKLREFDDLQNIATYGFRGEALASISHIAHLTIVSKTCN 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS 180
CA Y A + L ++ I E+ + +V + +YQ
Sbjct: 121 ELCA-----YKAHFVDGKLQGAPLPTAGNQGTIVTVEDLFFNMSVRKKALRSPAEEYQKI 175
Query: 181 EKIVERACL--------LEIASLNN-----------------------LELLSVEGTDDA 209
++V + + L ++ NN EL+ E +D
Sbjct: 176 SEVVGKYAIHNSKVGFGLRKSNENNDIRTPPDSTCVENIRIVYSNTIARELVDFELENDI 235
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ K G++TNVN+S+KK TFLLFINN +K+ I+QVY+ YLPK S PFVYLSL
Sbjct: 236 LKFKARGYMTNVNYSSKKFTFLLFINNRLVDCNNLKKCIDQVYATYLPKNSHPFVYLSLE 295
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP +VDVNVHPTKHEVHFL+ED I+E V LE LL SN SRV+YTQ+
Sbjct: 296 LDPVSVDVNVHPTKHEVHFLNEDQIVEAVCGALETRLLKSNNSRVYYTQA 345
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 156/213 (73%), Gaps = 6/213 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ST+IQ+TVK GGLKLLQIQDNGTGIRK+D IVCE
Sbjct: 23 IIQRPANALKEMIENS-----LDAHSTNIQITVKNGGLKLLQIQDNGTGIRKDDFAIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +F+DL +I+T+GFRGEALASISH+AHLTI++KT CAY+A ++D KL+
Sbjct: 78 RFTTSKLREFDDLQNIATYGFRGEALASISHIAHLTIVSKTCNELCAYKAHFVDGKLQGA 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
P AGNQGT + EDLF+N+ R+KAL+ P+EEY KI++VV +YA+HN VGF L+K N
Sbjct: 138 PLPTAGNQGTIVTVEDLFFNMSVRKKALRSPAEEYQKISEVVGKYAIHNSKVGFGLRKSN 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRF 500
EN DIRT +S+ E I +Y N I+R + F
Sbjct: 198 EN-NDIRTPPDSTCVENIRIVYSNTIARELVDF 229
>gi|410900538|ref|XP_003963753.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Takifugu
rubripes]
Length = 750
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 232/357 (64%), Gaps = 33/357 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KEL+EN LDAKST+IQVTVK GGLK+LQIQDNGTG
Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKVLQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IR+EDM+I+CERFTTSKL FEDL++I+T+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 65 IRREDMEIICERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAKCAYR 124
Query: 127 WCTYLADLMA----LALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---- 177
L A + +Q L D + + + T E++ + + S+Y
Sbjct: 125 ASYTDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPTDEYSRIVDVVSRYAIHN 184
Query: 178 --------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWIT 219
+ E + + L + ++N+ EL+ V D K+ G+++
Sbjct: 185 SGKSFSVKKQGETVADVRTLANASVVDNIRGVFGNAVSRELIEVACEDQKLAFKMKGYVS 244
Query: 220 NVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N N+S KK +LFIN+ +K+ IE VY YLPK + PF+YLSL + P+N+DVNV
Sbjct: 245 NANYSVKKCILILFINHRLVESSMLKKAIENVYGAYLPKNTHPFLYLSLQIAPQNIDVNV 304
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQI 330
HPTKHEVHFLHED++IE VQ +E LLGSN+SR ++TQ VT+ L L++
Sbjct: 305 HPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQVLQNSVTIHLDVLSSLEV 361
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 158/195 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+IQVTVK GGLK+LQIQDNGTGIR+EDM+I+CERFTTSKL FEDL++I+T+GFRG
Sbjct: 39 AKSTNIQVTVKDGGLKVLQIQDNGTGIRREDMEIICERFTTSKLQTFEDLSAIATYGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT + CAYRASY D KLK P KPCAGNQGTQI+ EDLFYN+ T
Sbjct: 99 EALASISHVAHVTITTKTADAKCAYRASYTDGKLKGPPKPCAGNQGTQILVEDLFYNVST 158
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK P++EY++I DVVSRYA+HN F++KKQ E +AD+RT N+S + I ++G
Sbjct: 159 RRKALKSPTDEYSRIVDVVSRYAIHNSGKSFSVKKQGETVADVRTLANASVVDNIRGVFG 218
Query: 491 NNISRRVRRFSSASQ 505
N +SR + + Q
Sbjct: 219 NAVSRELIEVACEDQ 233
>gi|13591989|ref|NP_112315.1| DNA mismatch repair protein Mlh1 [Rattus norvegicus]
gi|13878571|sp|P97679.1|MLH1_RAT RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL
protein homolog 1
gi|1724118|gb|AAB38506.1| mismatch repair protein [Rattus norvegicus]
Length = 757
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 223/342 (65%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE+ EN LDAKST+IQV V++GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A ++ + L+ E+ G E ++ +
Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHN 187
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ + S + E + + L +++N+ EL+ V D K+ G+
Sbjct: 188 SGISF--SVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGY 245
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +K+ IE VY+ YLPK + PF+YL L + P+NVDV
Sbjct: 246 ISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLILEISPQNVDV 305
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 347
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 152/193 (78%)
Query: 305 TSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSIS 364
T +ST+IQV V++GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL IS
Sbjct: 36 TENCLDAKSTNIQVIVREGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLAMIS 95
Query: 365 TFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDL 424
T+GFRGEALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDL
Sbjct: 96 TYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDL 155
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNI TR+KALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ +
Sbjct: 156 FYNIITRKKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDN 215
Query: 485 IGNIYGNNISRRV 497
I +I+GN +SR +
Sbjct: 216 IRSIFGNAVSREL 228
>gi|307176631|gb|EFN66099.1| DNA mismatch repair protein Mlh1 [Camponotus floridanus]
Length = 868
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/359 (48%), Positives = 233/359 (64%), Gaps = 33/359 (9%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KIKKLDE VVN+IAAGE+IQRPANALKEL+ENSLDAK+T+IQ+T K+GGLKLLQI
Sbjct: 1 MCTPAKIKKLDEIVVNKIAAGEIIQRPANALKELIENSLDAKATNIQITTKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDMDIVCERFTTSKL +FEDL++++TFGFRGEALASISH+A LTI TKT
Sbjct: 61 QDNGTGIRKEDMDIVCERFTTSKLQKFEDLSALTTFGFRGEALASISHIALLTITTKTAD 120
Query: 121 ------------------SPCAYRWCTYLA-DLMALALMEMSQYLQRDKEQIGDKEEKQW 161
+PCA T + + + + + L E+ E
Sbjct: 121 EKCAYKASYINSKLKAPPAPCAGNQGTIITIENLFYNVATRRKALSNPSEEFNKITEIVM 180
Query: 162 YRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNL--ELLSVEGTDDAFQLK 213
V + V ++ S V + + I N++ ELL VE DD ++ K
Sbjct: 181 KYAVHNPTVGFTLKKHGESSAQVRTPHNSTKQSNIRILYTNSVARELLEVELNDDTYKFK 240
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ +TN N++ K+M LLFINN I++M+E++YS+YLPK + P+ Y+SL ++P+
Sbjct: 241 MQALVTNANYTNKRMMMLLFINNRLVDSSSIRKMLEEIYSVYLPKKTHPWCYISLDINPQ 300
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLK 326
N+DVNVHPTKHEV FLHEDTIIER++ L++ L G++ SR FY Q+ +V + + L+
Sbjct: 301 NIDVNVHPTKHEVRFLHEDTIIERMKFALDERLAGNSASRTFYLQARLPKVDISKEVLE 359
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 162/210 (77%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ++T+IQ+T K+GGLKLLQIQDNGTGIRKEDMDIVCE
Sbjct: 23 IIQRPANALKELIENS-----LDAKATNIQITTKEGGLKLLQIQDNGTGIRKEDMDIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL++++TFGFRGEALASISH+A LTI TKT CAY+ASYI+SKLK P
Sbjct: 78 RFTTSKLQKFEDLSALTTFGFRGEALASISHIALLTITTKTADEKCAYKASYINSKLKAP 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
PCAGNQGT I E+LFYN+ TRRKAL PSEE+NKI ++V +YAVHNP VGFTLKK
Sbjct: 138 PAPCAGNQGTIITIENLFYNVATRRKALSNPSEEFNKITEIVMKYAVHNPTVGFTLKKHG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
E+ A +RT NS+ I +Y N+++R +
Sbjct: 198 ESSAQVRTPHNSTKQSNIRILYTNSVAREL 227
>gi|327275079|ref|XP_003222301.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Anolis
carolinensis]
Length = 746
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/386 (48%), Positives = 240/386 (62%), Gaps = 52/386 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAK+TSIQVTVK GGLKL+QIQDNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMVENCLDAKATSIQVTVKDGGLKLIQIQDNGCG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI +KT
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITSKTADGKCAYR 127
Query: 122 -------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
PCA T + DL + + L+ E+ + +
Sbjct: 128 ANYSDGKLKSAPKPCAGNQGTQITVEDLF-YNVTTRRKALKNPSEEYAKILDVVSRYAIH 186
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
++ V S + E + + L +++N+ EL+ V D A K+ G
Sbjct: 187 NSGVSF--SVKKQGETVADVRTLSNGTTVDNIRSVFGNAVSRELIEVGCEDTALAFKMKG 244
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
++TN N+S KK TFLLFIN+ +++ IE VY+ YLPK + PF+Y+SL + P+NVD
Sbjct: 245 YVTNANYSVKKCTFLLFINHRLVESSALRKAIETVYAAYLPKNTHPFLYISLEITPQNVD 304
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ---------STSIQVT-- 319
VNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ ST + T
Sbjct: 305 VNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGATVSSTDVVKTTN 364
Query: 320 --VKQGGLKLLQIQDNGTGIRKEDMD 343
V QGG K+ Q T R + +D
Sbjct: 365 SSVGQGGDKVYAHQMVRTDSRDQKLD 390
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/186 (69%), Positives = 151/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++TSIQVTVK GGLKL+QIQDNG GIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KATSIQVTVKDGGLKLIQIQDNGCGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI +KT CAYRA+Y D KLK KPCAGNQGTQI EDLFYN+ TR
Sbjct: 103 ALASISHVAHVTITSKTADGKCAYRANYSDGKLKSAPKPCAGNQGTQITVEDLFYNVTTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI DVVSRYA+HN V F++KKQ E +AD+RT N + + I +++GN
Sbjct: 163 RKALKNPSEEYAKILDVVSRYAIHNSGVSFSVKKQGETVADVRTLSNGTTVDNIRSVFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|195123472|ref|XP_002006230.1| GI18680 [Drosophila mojavensis]
gi|193911298|gb|EDW10165.1| GI18680 [Drosophila mojavensis]
Length = 659
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/349 (52%), Positives = 223/349 (63%), Gaps = 42/349 (12%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +P IKKLDE V+NRIAAGE+IQRPANALKELLENSLDAKS+ IQV VK GGLKLLQI
Sbjct: 1 MLEPGIIKKLDEVVINRIAAGEIIQRPANALKELLENSLDAKSSHIQVNVKSGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKED+ IVCERFTTSKL++FEDL I+TFGFRGEALASISHVAHLTI TKT +
Sbjct: 61 QDNGTGIRKEDLSIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLTIQTKTAS 120
Query: 121 SPCAYRWCTYLADLMALA------------------LMEMSQYLQRDK------EQIGDK 156
C Y+ TY AD LA M Q Q K ++I D
Sbjct: 121 ERCGYK-ATY-ADGKLLAPPKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDV 178
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDDA 209
K + V L K QPS K +AC ++ + EL+ D+
Sbjct: 179 LAKYAVHNPQVGFV-LRKQGEQPSLKT--QACSSRTENIRAIYGAAVAKELMEFSHKDEM 235
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
F+ ++ +T VN+S KK T LLFIN+ +K ++ VY+ YLP+G PFVY+SL
Sbjct: 236 FKFELECQLTQVNYSAKKSTLLLFINHRLVESSALKTALDTVYATYLPRGQHPFVYMSLM 295
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ P+N+DVNVHPTKHEVHFL++D IIER++ +E LLGSN +R FY Q
Sbjct: 296 LPPQNLDVNVHPTKHEVHFLYQDEIIERIKQQVEAKLLGSNATRSFYKQ 344
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 159/214 (74%), Gaps = 6/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQV VK GGLKLLQIQDNGTGIRKED+ IVCE
Sbjct: 23 IIQRPANALKELLENSLDAK-----SSHIQVNVKSGGLKLLQIQDNGTGIRKEDLSIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL++FEDL I+TFGFRGEALASISHVAHLTI TKT + C Y+A+Y D KL P
Sbjct: 78 RFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLTIQTKTASERCGYKATYADGKLLAP 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFY +P RR+ALK P+EE+ KI+DV+++YAVHNP VGF L+KQ
Sbjct: 138 PKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHNPQVGFVLRKQG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E ++T SS +E I IYG +++ + FS
Sbjct: 198 EQ-PSLKTQACSSRTENIRAIYGAAVAKELMEFS 230
>gi|238859665|ref|NP_001154957.1| mutL homolog 1 [Nasonia vitripennis]
Length = 752
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 231/362 (63%), Gaps = 39/362 (10%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KI+KLDETVVNRIAAGE+IQRPANALKEL+ENSLDAK+T+IQV+VK+GG+KLLQI
Sbjct: 1 MTTPRKIRKLDETVVNRIAAGEIIQRPANALKELIENSLDAKATNIQVSVKEGGMKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRK+D+DIVCERFTTSKL F+DL SISTFGFRGEALASISHVAHLTI TKT
Sbjct: 61 QDNGTGIRKDDLDIVCERFTTSKLQTFDDLKSISTFGFRGEALASISHVAHLTITTKTAN 120
Query: 121 SPCAYRWCTYL--------------------ADLMALALMEMSQYLQRDKEQIGDKEEKQ 160
CAY+ +YL + + + + L E++ E
Sbjct: 121 EKCAYK-ASYLDGKLKEPPTRCAGNQGTIITVENLFYNVATRRKALNSPSEELSKINEVV 179
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAF 210
V + V +Y + +V ++NN+ ELL V+ D +
Sbjct: 180 TRYAVHNPSVGFTLKKYGEAANLVRTPH--SSTNINNIRLLFGNNIAKELLEVKLDDARY 237
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ K+ +TN N+S K+M LLFIN+ IK+ +E +YS+YLPK + P+ Y+SL +
Sbjct: 238 KFKLHALVTNANYSGKRMMLLLFINHRLVDSSAIKKTLEDIYSVYLPKKAHPWCYISLEI 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
+P+NVDVNVHPTK+EV FLHE+ IIE+++ L++ L ++ SR FY Q+ QV + +
Sbjct: 298 EPQNVDVNVHPTKYEVRFLHEEAIIEKIKISLDEKLASNDASRTFYIQAKLPQVNITEEV 357
Query: 325 LK 326
L+
Sbjct: 358 LE 359
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 161/210 (76%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ++T+IQV+VK+GG+KLLQIQDNGTGIRK+D+DIVCE
Sbjct: 23 IIQRPANALKELIENS-----LDAKATNIQVSVKEGGMKLLQIQDNGTGIRKDDLDIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL F+DL SISTFGFRGEALASISHVAHLTI TKT CAY+ASY+D KLK+P
Sbjct: 78 RFTTSKLQTFDDLKSISTFGFRGEALASISHVAHLTITTKTANEKCAYKASYLDGKLKEP 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
CAGNQGT I E+LFYN+ TRRKAL PSEE +KI +VV+RYAVHNP VGFTLKK
Sbjct: 138 PTRCAGNQGTIITVENLFYNVATRRKALNSPSEELSKINEVVTRYAVHNPSVGFTLKKYG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
E +RT +S++ I ++GNNI++ +
Sbjct: 198 EAANLVRTPHSSTNINNIRLLFGNNIAKEL 227
>gi|157169422|ref|XP_001651509.1| DNA mismatch repair protein mlh1 [Aedes aegypti]
gi|108878401|gb|EAT42626.1| AAEL005858-PA [Aedes aegypti]
Length = 661
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 225/345 (65%), Gaps = 36/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I KLDE VVNRIAAGE+IQRPANALKE++ENSLDAKSTSIQ+ +K GGLK LQIQD
Sbjct: 2 EPGIICKLDEVVVNRIAAGEIIQRPANALKEMIENSLDAKSTSIQIVIKYGGLKSLQIQD 61
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NGTGIR++D+ IVCERFTTSKL +FEDL+SI T+GFRGEALASISHVAHL I TKTK
Sbjct: 62 NGTGIRRDDLAIVCERFTTSKLQKFEDLSSIETYGFRGEALASISHVAHLIITTKTKDEK 121
Query: 123 CAYRWCTY---------------------LADLMALALMEMSQYLQRDKEQIGDKEEKQW 161
CA++ TY + DL M Q L+ E+ +
Sbjct: 122 CAFK-ATYEDGKLKGDIKPCAGNQGTQITVEDLFYNVPMR-KQALKAPNEEFQKISDVVS 179
Query: 162 YRTVEHTLVPLMKSQYQPSEKI-------VERACLLEIASLNNLELLSVEGTDDAFQLKV 214
V + M ++ + I VE + S + LL + DD QL+V
Sbjct: 180 KYAVHNPQTGFMLKKFGENATIRTQAKSTVETNIAMIYGSSISKSLLKIAIDDDILQLQV 239
Query: 215 TGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
G++TNVNF+ KK FLLFIN+ IK+ I+Q+YS+YLPKGS PFVYLS+ ++P N
Sbjct: 240 NGFVTNVNFNLKKGMFLLFINHRAVDSTNIKKAIDQIYSLYLPKGSAPFVYLSIELNPNN 299
Query: 269 VDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VDVNVHPTKHEVHFLHE+ IIE+++ +E+ LLG N SR FYTQ+
Sbjct: 300 VDVNVHPTKHEVHFLHEEEIIEKIKEAVERVLLGGNASRTFYTQA 344
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ++ STSIQ+ +K GGLK LQIQDNGTGIR++D+ IVCE
Sbjct: 22 IIQRPANALKEMIENSLDAK-----STSIQIVIKYGGLKSLQIQDNGTGIRRDDLAIVCE 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL+SI T+GFRGEALASISHVAHL I TKTK CA++A+Y D KLK
Sbjct: 77 RFTTSKLQKFEDLSSIETYGFRGEALASISHVAHLIITTKTKDEKCAFKATYEDGKLKGD 136
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKPCAGNQGTQI EDLFYN+P R++ALK P+EE+ KI+DVVS+YAVHNP GF LKK
Sbjct: 137 IKPCAGNQGTQITVEDLFYNVPMRKQALKAPNEEFQKISDVVSKYAVHNPQTGFMLKKFG 196
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
EN A IRT S+ I IYG++IS+ + + +
Sbjct: 197 EN-ATIRTQAKSTVETNIAMIYGSSISKSLLKIA 229
>gi|195381773|ref|XP_002049619.1| GJ21695 [Drosophila virilis]
gi|194144416|gb|EDW60812.1| GJ21695 [Drosophila virilis]
Length = 660
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 227/358 (63%), Gaps = 39/358 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P IKKLDE VVNRIAAGE+IQRPANALKELLENSLDAKS+ IQVT+K GGLKLL+IQD
Sbjct: 2 EPGVIKKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVTIKSGGLKLLEIQD 61
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NGTGIRK+D+ IVCERFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT +
Sbjct: 62 NGTGIRKDDLSIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASER 121
Query: 123 CAYRWCTYLADLMA-------------------LALMEMSQYLQRDKEQ---IGDKEEKQ 160
C Y+ L+A + + Q L+ E+ I D K
Sbjct: 122 CGYKATYSDGKLLAPPKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKY 181
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLSVEGTDDAFQLKVT 215
+ V L K QP+ K R+ E + EL++ DD F+ ++
Sbjct: 182 AVHNPQVGFV-LRKQGEQPTLKTQARSSRAENIRAIYGAAVAKELMNFSHKDDMFKFELE 240
Query: 216 GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+T VN++ KK T LLFIN+ +K ++ VY+ YLP+G PFVY+SL + P+N+
Sbjct: 241 CQLTQVNYAVKKSTLLLFINHRLVESPALKAAVDAVYATYLPRGQHPFVYMSLMLPPQNL 300
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ-----STSIQVTVKQ 322
DVNVHPTKHEVHFL+++ IIER++ +E LLGSN +R FY Q S+ ++VT Q
Sbjct: 301 DVNVHPTKHEVHFLYQEEIIERIKQQMEAKLLGSNATRSFYKQLKLPGSSQLEVTQTQ 358
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQVT+K GGLKLL+IQDNGTGIRK+D+ IVCE
Sbjct: 22 IIQRPANALKELLENSLDAK-----SSHIQVTIKSGGLKLLEIQDNGTGIRKDDLSIVCE 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT + C Y+A+Y D KL P
Sbjct: 77 RFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASERCGYKATYSDGKLLAP 136
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFY +P RR+ALK P+EE+ KI+DV+++YAVHNP VGF L+KQ
Sbjct: 137 PKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHNPQVGFVLRKQG 196
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E ++T SS +E I IYG +++ + FS
Sbjct: 197 EQ-PTLKTQARSSRAENIRAIYGAAVAKELMNFS 229
>gi|332021655|gb|EGI62014.1| DNA mismatch repair protein Mlh1 [Acromyrmex echinatior]
Length = 862
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/349 (48%), Positives = 223/349 (63%), Gaps = 39/349 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KI+KLDE VVNRIAAGE+IQRPANALKEL+ENSLDAK+T+IQ+T K+GGLKLLQI
Sbjct: 1 MCTPAKIRKLDEVVVNRIAAGEIIQRPANALKELIENSLDAKATNIQITAKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL +FEDL +++TFGFRGEALASISH+A LTI TKT
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQKFEDLGALTTFGFRGEALASISHIALLTITTKTAD 120
Query: 121 SPCAYRWCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQW 161
CAY+ + L A + + L E+ E
Sbjct: 121 EKCAYKASYINSKLKAPPVPCAGNQGTVITIENLFYNVATRRKALSNPSEEFTKITEVVM 180
Query: 162 YRTVEHTLVPL-MKSQYQPSEKIVERACLLEIASLNNLELL----------SVEGTDDAF 210
V ++ + +K +PS ++ NN+ +L VE D +
Sbjct: 181 RYAVHNSAIGFTLKKHGEPSSQV---RTPYNSTKQNNIRILYGNPVARELLEVELDDKDY 237
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ K+ G +TN N++ K+M LLFINN I++M+E VYS+YLPK + P+ Y+SL +
Sbjct: 238 KFKMHGLVTNPNYTNKRMVMLLFINNRLVDSASIRKMLEDVYSVYLPKKAHPWCYISLDI 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+P+N+DVNVHPTKHEV FLHED IIER++ L++ L G++ SR FY Q+
Sbjct: 298 NPQNIDVNVHPTKHEVRFLHEDAIIERIKFALDERLTGNSASRTFYLQA 346
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ++T+IQ+T K+GGLKLLQIQDNGTGIRKEDM+IVCE
Sbjct: 23 IIQRPANALKELIENS-----LDAKATNIQITAKEGGLKLLQIQDNGTGIRKEDMEIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL +++TFGFRGEALASISH+A LTI TKT CAY+ASYI+SKLK P
Sbjct: 78 RFTTSKLQKFEDLGALTTFGFRGEALASISHIALLTITTKTADEKCAYKASYINSKLKAP 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
PCAGNQGT I E+LFYN+ TRRKAL PSEE+ KI +VV RYAVHN +GFTLKK
Sbjct: 138 PVPCAGNQGTVITIENLFYNVATRRKALSNPSEEFTKITEVVMRYAVHNSAIGFTLKKHG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
E + +RT NS+ I +YGN ++R +
Sbjct: 198 EPSSQVRTPYNSTKQNNIRILYGNPVAREL 227
>gi|307191602|gb|EFN75099.1| DNA mismatch repair protein Mlh1 [Harpegnathos saltator]
Length = 833
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 226/349 (64%), Gaps = 39/349 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KIKKLDE VVNRIAAGEVIQRPANALKEL+ENSLDAK+T+IQ+TVK+GGLKLLQI
Sbjct: 1 MSTPAKIKKLDEVVVNRIAAGEVIQRPANALKELIENSLDAKATNIQITVKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL +FEDLN+++TFGFRGEALASISHVA L+I TKT
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQKFEDLNALTTFGFRGEALASISHVALLSITTKTAD 120
Query: 121 SPCAYRWCTYLADLMA-----------LALMEMSQY--------LQRDKEQIGDKEEKQW 161
CAY+ + L A + +E Y L E+ E
Sbjct: 121 EKCAYKASYLNSKLKAPPVPCAGNQGTIITIENLFYNVPTRRKALSSSSEEFTKITEVVM 180
Query: 162 YRTVEHTLVPL-MKSQYQPSEKIVERACLLEIASLNNLELL----------SVEGTDDAF 210
V + V +K +PS ++ NN+ +L VE D ++
Sbjct: 181 RYAVHNQAVGFTLKKHGEPSPQVRTPH---NSTKQNNIRILYGNPVARELLEVELNDKSY 237
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ ++ +TN N++ K+M LLFINN I++M+E +Y++YLPK + P+ Y+SL +
Sbjct: 238 KFQMHALVTNPNYTNKRMLMLLFINNRLVDSSSIRKMLEDLYTVYLPKKAHPWCYISLDI 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+P+N+DVNVHPTKHEV FLHED IIE+++ L++ L GS+ SR FY Q+
Sbjct: 298 NPQNIDVNVHPTKHEVRFLHEDAIIEKIKFALDERLTGSSASRTFYLQA 346
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 149/186 (80%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+IQ+TVK+GGLKLLQIQDNGTGIRKEDM+IVCERFTTSKL +FEDLN+++TFGFRGE
Sbjct: 42 KATNIQITVKEGGLKLLQIQDNGTGIRKEDMEIVCERFTTSKLQKFEDLNALTTFGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVA L+I TKT CAY+ASY++SKLK P PCAGNQGT I E+LFYN+PTR
Sbjct: 102 ALASISHVALLSITTKTADEKCAYKASYLNSKLKAPPVPCAGNQGTIITIENLFYNVPTR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKAL SEE+ KI +VV RYAVHN VGFTLKK E +RT NS+ I +YGN
Sbjct: 162 RKALSSSSEEFTKITEVVMRYAVHNQAVGFTLKKHGEPSPQVRTPHNSTKQNNIRILYGN 221
Query: 492 NISRRV 497
++R +
Sbjct: 222 PVAREL 227
>gi|195024672|ref|XP_001985918.1| GH21079 [Drosophila grimshawi]
gi|193901918|gb|EDW00785.1| GH21079 [Drosophila grimshawi]
Length = 662
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/345 (51%), Positives = 219/345 (63%), Gaps = 38/345 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P IKKLD+ VVNRIAAGE+IQRPANALKELLENSLDAKS+ IQV VK GGLKLLQIQD
Sbjct: 4 EPGVIKKLDQVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVNVKSGGLKLLQIQD 63
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NGTGIRKED+ IVCERFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT +
Sbjct: 64 NGTGIRKEDLAIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASEK 123
Query: 123 CAYRWCTYLADLMALA----------------LMEMSQYLQRDK------EQIGDKEEKQ 160
C Y+ L+ A M Q Q K ++I D K
Sbjct: 124 CGYKASYSDGKLLDAAKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKY 183
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDDAFQLK 213
+ V L K QP+ K +AC ++ + EL+ D+ F+ +
Sbjct: 184 AVHNPQVAFV-LRKQGEQPTLKT--QACSSRTENIRAIYGGAVAKELMEFSHKDEMFRFE 240
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ +T VN++ KK T LLFIN+ +K I+ VY+ YLP+G PFVY+SL M P+
Sbjct: 241 LQCQLTQVNYAAKKSTLLLFINHRLVESPALKAAIDGVYTTYLPRGQHPFVYMSLVMPPQ 300
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL++D IIER++ +E LLGSN +R FY Q
Sbjct: 301 NLDVNVHPTKHEVHFLYQDEIIERIKLQVEAKLLGSNATRSFYKQ 345
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 158/214 (73%), Gaps = 6/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQV VK GGLKLLQIQDNGTGIRKED+ IVCE
Sbjct: 24 IIQRPANALKELLENSLDAK-----SSHIQVNVKSGGLKLLQIQDNGTGIRKEDLAIVCE 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT + C Y+ASY D KL D
Sbjct: 79 RFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASEKCGYKASYSDGKLLDA 138
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFY +P RR+ALK P+EE+ KI+DV+++YAVHNP V F L+KQ
Sbjct: 139 AKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHNPQVAFVLRKQG 198
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E ++T SS +E I IYG +++ + FS
Sbjct: 199 EQ-PTLKTQACSSRTENIRAIYGGAVAKELMEFS 231
>gi|426249056|ref|XP_004018268.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Ovis aries]
Length = 689
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/353 (49%), Positives = 224/353 (63%), Gaps = 39/353 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
IRKED++IVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 122 -------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
PCA T + DL + + L+ E+ G E +
Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLF-YNISTRRKALKNPSEEYGKILEVVGRYAIH 186
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
++ + S + E + + L ++N+ EL+ V D K+ G
Sbjct: 187 NSGIGF--SVKKQGETVADVRTLPNATIVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNG 244
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 245 YISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLSLEISPQNVD 304
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
VNVHPTKHEVHFLHE++I+ER+Q +E LLGSN SR ++TQ+ +T G
Sbjct: 305 VNVHPTKHEVHFLHEESILERLQQHIEDRLLGSNASRTYFTQTLLPGLTGPSG 357
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED++IVCERFTTSKL FEDL IST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRA Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RYA+HN +GF++KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYAIHNSGIGFSVKKQGETVADVRTLPNATIVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|449268932|gb|EMC79760.1| DNA mismatch repair protein Mlh1, partial [Columba livia]
Length = 658
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/343 (49%), Positives = 225/343 (65%), Gaps = 39/343 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLK +Q+QDNG G
Sbjct: 7 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQDNGCG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
IRKED+DIVCERFTTSKL +FEDL SIST+GFRGEALASISHVAH+T+ TKT +
Sbjct: 67 IRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYR 126
Query: 122 -------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
PCA T + DL + + L+ E+ E +
Sbjct: 127 AVYSDGKIKGPPKPCAGNQGTQITVEDLF-YNVNTRRKALKNPNEEYAKIVEVVSRYAIH 185
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
++ + S + + + + L ++++N+ EL+ V D + K+ G
Sbjct: 186 NSGISF--SVKKQGDTMSDVRTLSNASTVDNIRSIFGNAVSRELIEVGCEDASLAFKLKG 243
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ITN N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 244 YITNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKSTHPFLYLSLEIAPQNVD 303
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTKHEVHFLHED+I+E VQ +E LLGSN+SR+++TQ+
Sbjct: 304 VNVHPTKHEVHFLHEDSILEHVQRHVENKLLGSNSSRMYFTQT 346
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLK +Q+QDNG GIRKED+DIVCERFTTSKL +FEDL SIST+GFRGE
Sbjct: 42 KSTSIQVVVKEGGLKFIQVQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+T+ TKT + CAYRA Y D K+K P KPCAGNQGTQI EDLFYN+ TR
Sbjct: 102 ALASISHVAHVTVTTKTADAKCAYRAVYSDGKIKGPPKPCAGNQGTQITVEDLFYNVNTR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK P+EEY KI +VVSRYA+HN + F++KKQ + ++D+RT N+S + I +I+GN
Sbjct: 162 RKALKNPNEEYAKIVEVVSRYAIHNSGISFSVKKQGDTMSDVRTLSNASTVDNIRSIFGN 221
Query: 492 NISRRV 497
+SR +
Sbjct: 222 AVSREL 227
>gi|260828245|ref|XP_002609074.1| hypothetical protein BRAFLDRAFT_91042 [Branchiostoma floridae]
gi|229294428|gb|EEN65084.1| hypothetical protein BRAFLDRAFT_91042 [Branchiostoma floridae]
Length = 717
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 226/342 (66%), Gaps = 37/342 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L+ETVVNRIAAGEVI RPANA+KE+LEN LDAKS+SIQV VK GGLKLLQIQDNGTG
Sbjct: 5 IRRLEETVVNRIAAGEVIVRPANAVKEMLENCLDAKSSSIQVVVKSGGLKLLQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IR++DM IVCERFTTSKL +FEDL SI+T+GFRGEALASISHVAH+TI+T+T S CAY+
Sbjct: 65 IRRDDMGIVCERFTTSKLQKFEDLTSIATYGFRGEALASISHVAHVTIVTRTADSKCAYK 124
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTV--EHTLVPLMKSQY-- 177
+Y +D LA + Q + + D ++ R+ EH V + S+Y
Sbjct: 125 -ASY-SDGKPLATPKPCAGNQGTQITVEDLFYNVPSRRKAMRSPGEEHAKVAEVMSRYAI 182
Query: 178 ----------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGW 217
+ E + E ++++N+ EL+ V+ D + G
Sbjct: 183 HNAGVGFTLKKQGESMAELRTSPTSSTIDNIRTVYGPAVARELIEVKCDDSRLAFSMKGH 242
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+STKK FLLFIN+ +++ +E VYS YLPK PFVY+S+ + P +VDV
Sbjct: 243 ISNANYSTKKFIFLLFINHRLVDSTALRKALEAVYSAYLPKNMHPFVYMSVEIMPSHVDV 302
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED IIE +Q +E +LLG N+SR F+TQ+
Sbjct: 303 NVHPTKHEVHFLHEDVIIEAIQKQVETSLLGCNSSRTFFTQA 344
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+S+SIQV VK GGLKLLQIQDNGTGIR++DM IVCERFTTSKL +FEDL SI+T+GFRGE
Sbjct: 40 KSSSIQVVVKSGGLKLLQIQDNGTGIRRDDMGIVCERFTTSKLQKFEDLTSIATYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI+T+T S CAY+ASY D K KPCAGNQGTQI EDLFYN+P+R
Sbjct: 100 ALASISHVAHVTIVTRTADSKCAYKASYSDGKPLATPKPCAGNQGTQITVEDLFYNVPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKA++ P EE+ K+A+V+SRYA+HN VGFTLKKQ E++A++RT+ SS + I +YG
Sbjct: 160 RKAMRSPGEEHAKVAEVMSRYAIHNAGVGFTLKKQGESMAELRTSPTSSTIDNIRTVYGP 219
Query: 492 NISRRV 497
++R +
Sbjct: 220 AVAREL 225
>gi|426249054|ref|XP_004018267.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Ovis aries]
Length = 758
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/353 (49%), Positives = 224/353 (63%), Gaps = 39/353 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
IRKED++IVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Query: 122 -------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
PCA T + DL + + L+ E+ G E +
Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLF-YNISTRRKALKNPSEEYGKILEVVGRYAIH 186
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
++ + S + E + + L ++N+ EL+ V D K+ G
Sbjct: 187 NSGIGF--SVKKQGETVADVRTLPNATIVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNG 244
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 245 YISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLSLEISPQNVD 304
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
VNVHPTKHEVHFLHE++I+ER+Q +E LLGSN SR ++TQ+ +T G
Sbjct: 305 VNVHPTKHEVHFLHEESILERLQQHIEDRLLGSNASRTYFTQTLLPGLTGPSG 357
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/187 (70%), Positives = 152/187 (81%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED++IVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRA Y D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RYA+HN +GF++KKQ E +AD+RT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYAIHNSGIGFSVKKQGETVADVRTLPNATIVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|158300415|ref|XP_320342.4| AGAP012192-PA [Anopheles gambiae str. PEST]
gi|157013148|gb|EAA00135.4| AGAP012192-PA [Anopheles gambiae str. PEST]
Length = 674
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 234/359 (65%), Gaps = 62/359 (17%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
MD P I+KLDE VVNRIAAGE+IQRPANALKE++ENSLDAK+TSI +TVK GGL+ LQI
Sbjct: 1 MD-PGVIRKLDEVVVNRIAAGEIIQRPANALKEMIENSLDAKATSITITVKAGGLRSLQI 59
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIR+ED+ IVCERFTTSKL F+DL+SIST+GFRGEALASISHVAHLTI+TKTK
Sbjct: 60 QDNGTGIRREDLGIVCERFTTSKLQSFDDLSSISTYGFRGEALASISHVAHLTIVTKTK- 118
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMK---- 174
+ C Y A L+ D + I + Q TV+ VP+ K
Sbjct: 119 ----HEKCAYKA-------CYEDGKLKGDIKPIAGNQGTQI--TVDELFYNVPMRKQALK 165
Query: 175 ---SQYQPSEKIVER-------ACLL-----EIASL---------NNL----------EL 200
++Q +V + AC + E A++ +N+ L
Sbjct: 166 TPNEEFQRISDVVSKYAVHNPHACFILKKFGETATIRTQAKTTVAHNIGAIYGAGIGKAL 225
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+ +E D+ QL V G++TNVNFS KK L+FIN+ +K+ I+ +Y++YLPKGS
Sbjct: 226 VPIELRDEVMQLTVEGYVTNVNFSLKKGISLMFINHRAVECSALKKAIDAIYAVYLPKGS 285
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYLSL ++P+NVDVNVHPTKHEVHFLHE+ I+E+V+ ++E+ LLG N +R YTQ+
Sbjct: 286 APFVYLSLELNPQNVDVNVHPTKHEVHFLHEEEIVEKVKLLVERALLGGNAARS-YTQA 343
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 157/208 (75%), Gaps = 6/208 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ + S ++ +TSI +TVK GGL+ LQIQDNGTGIR+ED+ IVCE
Sbjct: 22 IIQRPANALKEMIENSLDAK-----ATSITITVKAGGLRSLQIQDNGTGIRREDLGIVCE 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL F+DL+SIST+GFRGEALASISHVAHLTI+TKTK CAY+A Y D KLK
Sbjct: 77 RFTTSKLQSFDDLSSISTYGFRGEALASISHVAHLTIVTKTKHEKCAYKACYEDGKLKGD 136
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP AGNQGTQI ++LFYN+P R++ALK P+EE+ +I+DVVS+YAVHNPH F LKK
Sbjct: 137 IKPIAGNQGTQITVDELFYNVPMRKQALKTPNEEFQRISDVVSKYAVHNPHACFILKKFG 196
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
E A IRT ++ + IG IYG I +
Sbjct: 197 ET-ATIRTQAKTTVAHNIGAIYGAGIGK 223
>gi|344288033|ref|XP_003415755.1| PREDICTED: DNA mismatch repair protein Mlh1 [Loxodonta africana]
Length = 754
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 40/342 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------- 119
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLARISTYGFRGEALASISHVAHVTITTKTADGKCAFR 127
Query: 120 -----------TSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
+PCA T + DL + + L+ E+ G E ++
Sbjct: 128 ANYSDGKLKAPPNPCAGNQGTQIVVEDLF-YNIATRRKALKNPSEEYGKILEVVGRYSIH 186
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG------TDDAFQ---LKVTGW 217
++ + ++ E + L +++N+ S+ G D+ Q ++G+
Sbjct: 187 NSGISFSVKKH--GETAADVRTLSNATTVDNIR--SIFGNAVSRYVDNLCQNLLRSLSGF 242
Query: 218 ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVDV
Sbjct: 243 ISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 302
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR ++TQ+
Sbjct: 303 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRTYFTQT 344
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 150/187 (80%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL IST+GFRG
Sbjct: 42 AKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLARISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CA+RA+Y D KLK P PCAGNQGTQI+ EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAFRANYSDGKLKAPPNPCAGNQGTQIVVEDLFYNIAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KK E AD+RT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKHGETAADVRTLSNATTVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR V
Sbjct: 222 NAVSRYV 228
>gi|50732924|ref|XP_418828.1| PREDICTED: DNA mismatch repair protein Mlh1 [Gallus gallus]
Length = 757
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 220/349 (63%), Gaps = 51/349 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDE VVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+Q+QDNG G
Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNGCG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---------- 116
IRKED+ IVCERFTTSKL +FEDL SIST+GFRGEALASISHVAH+T+ T
Sbjct: 68 IRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYR 127
Query: 117 --------KTKTSPCAYRWCT--------YLADLMALALMEMSQYLQRDKEQIGDKEEKQ 160
K PCA T Y + AL S+ + E +G
Sbjct: 128 ASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKNPSEEYAKILEVVGR----- 182
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAF 210
Y + +K Q + + + L +++N+ EL+ V D
Sbjct: 183 -YAIHNSGISFSVKKQ---GDTVSDVRTLSNATTVDNIRSIFGNAVSRELIEVGCEDANL 238
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K+ G+ITN N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL +
Sbjct: 239 AFKMKGYITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEI 298
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PKNVDVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 299 APKNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQT 347
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+Q+QDNG GIRKED+ IVCERFTTSKL +FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+T+ TKT + CAYRASY D K+K P KPCAGNQGTQI+ EDLFYN+ TR
Sbjct: 103 ALASISHVAHVTVTTKTADAKCAYRASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RYA+HN + F++KKQ + ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYAKILEVVGRYAIHNSGISFSVKKQGDTVSDVRTLSNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
>gi|194757576|ref|XP_001961040.1| GF13669 [Drosophila ananassae]
gi|190622338|gb|EDV37862.1| GF13669 [Drosophila ananassae]
Length = 663
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 221/345 (64%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+S+ IQV VKQGGLKLLQIQD
Sbjct: 5 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKQGGLKLLQIQD 64
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIRK+D+ IVCERFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 65 NGTGIRKDDLGIVCERFTTSKLSKFEDLTHIATFGFRGEALASISHVAHLSIQTKTAKER 124
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T ++ DL + + Q L+ ++ E
Sbjct: 125 CGYKATYADGKLQGQPKPCAGNQGTIISIEDLF-YNMPQRRQALRSPADEFQKLSEVLAR 183
Query: 163 RTVEHTLVPLM---KSQYQPSEKIV------ERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + + QPS + E ++ A+++ ELL D+ F+ +
Sbjct: 184 YAVHNPRVGFTLRKQGEAQPSIRTPIDSSRSENIRIIYGAAISK-ELLEFSHRDEVFKFE 242
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+T VN+S KK LLFINN +K +E VYS YLP+G PF+Y+SL + +
Sbjct: 243 AECLVTQVNYSAKKSQMLLFINNRLVESTSLKAALESVYSTYLPRGQHPFIYMSLTLPAQ 302
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
NVDVNVHPTKHEVHFL++D I+ER++ LE LLGSN++R FY Q
Sbjct: 303 NVDVNVHPTKHEVHFLYQDEIVERLKEQLEARLLGSNSTRTFYKQ 347
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QS+ IQV VKQGGLKLLQIQDNGTGIRK+D+ IVCE
Sbjct: 25 IIQRPANALKELLENS-----LDAQSSHIQVQVKQGGLKLLQIQDNGTGIRKDDLGIVCE 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL++FEDL I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 80 RFTTSKLSKFEDLTHIATFGFRGEALASISHVAHLSIQTKTAKERCGYKATYADGKLQGQ 139
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P++E+ K+++V++RYAVHNP VGFTL+KQ
Sbjct: 140 PKPCAGNQGTIISIEDLFYNMPQRRQALRSPADEFQKLSEVLARYAVHNPRVGFTLRKQG 199
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E IRT ++SS SE I IYG IS+ + FS
Sbjct: 200 EAQPSIRTPIDSSRSENIRIIYGAAISKELLEFS 233
>gi|126336754|ref|XP_001362893.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Monodelphis
domestica]
Length = 735
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 228/341 (66%), Gaps = 35/341 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDE VVNRIAAGEVIQRPANA+KE++EN LDA++++IQVTV++GGLKL+Q+QDNG+G
Sbjct: 8 IRRLDEKVVNRIAAGEVIQRPANAIKEMIENCLDARASAIQVTVREGGLKLIQVQDNGSG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
IR+ED+DIVCERFTTSKL FEDL SI+T+GFRGEALASISHVAH+T+ +KT +
Sbjct: 68 IRREDLDIVCERFTTSKLRAFEDLASIATYGFRGEALASISHVAHVTVTSKTAEAKCAYR 127
Query: 122 -------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
PCA T + DL + + L+ E+ G + +V
Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLF-YNVATRRKALKNPSEEYGKILDVVGRYSVH 186
Query: 167 HTLVPL-MKSQYQ--PSEKIVERACLLE-----IASLNNLELLSVEGTDDAFQLKVTGWI 218
++ V +K Q + P + + A +++ + + EL+ V D ++ G+I
Sbjct: 187 NSGVSFSVKKQGETVPDIRTLTNATVVDNIRSIFGNAVSRELIEVGCDDPLLAFRMKGFI 246
Query: 219 TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+N N+S KK FLLFIN+ +++ +E VY+ YLPK S PF+YLSL + P+NVDVN
Sbjct: 247 SNANYSVKKCIFLLFINHRLVESSALRKAVESVYAAYLPKNSHPFLYLSLEIAPQNVDVN 306
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VHPTKHEVHFLHED+I+ERVQ +E LLG+N+SR ++TQ+
Sbjct: 307 VHPTKHEVHFLHEDSILERVQQHIEGRLLGANSSRTYFTQT 347
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 154/187 (82%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++++IQVTV++GGLKL+Q+QDNG+GIR+ED+DIVCERFTTSKL FEDL SI+T+GFRG
Sbjct: 42 ARASAIQVTVREGGLKLIQVQDNGSGIRREDLDIVCERFTTSKLRAFEDLASIATYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+T+ +KT + CAYRASY D KLK P KPCAGNQGTQI EDLFYN+ T
Sbjct: 102 EALASISHVAHVTVTSKTAEAKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNVAT 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI DVV RY+VHN V F++KKQ E + DIRT N++ + I +I+G
Sbjct: 162 RRKALKNPSEEYGKILDVVGRYSVHNSGVSFSVKKQGETVPDIRTLTNATVVDNIRSIFG 221
Query: 491 NNISRRV 497
N +SR +
Sbjct: 222 NAVSREL 228
>gi|195431337|ref|XP_002063699.1| GK15817 [Drosophila willistoni]
gi|194159784|gb|EDW74685.1| GK15817 [Drosophila willistoni]
Length = 601
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 211/345 (61%), Gaps = 39/345 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P IKKLDE VVNRIAAGE+IQRPANALKELLENSLDAKS+ IQV VK GGLKLLQIQDN
Sbjct: 7 PGIIKKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSQIQVQVKAGGLKLLQIQDN 66
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
GTGIRK+D+ IVCERFTTSKL +FEDL I+TFGFRGEALASISHVAH+ I TKTK PC
Sbjct: 67 GTGIRKDDLGIVCERFTTSKLCKFEDLTQIATFGFRGEALASISHVAHMQIQTKTKQEPC 126
Query: 124 AYRWCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
Y+ L + ++ + Q L+ E+ +
Sbjct: 127 GYKASYADGKLQGAPKPCAGNQGTIITIEDLFYSMPQRRQALKSPAEEFQKLSDVVSKYA 186
Query: 165 VEHTLV-----------PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V P +K+ S K R S LEL + T F+ +
Sbjct: 187 VHNPHVGFTLKKQGEAQPALKTPVNSSRKENIRIIYGSAISKELLELTYKDDT---FKFQ 243
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ +T VN+S KK LLFIN +K ++ +YS YLP+G PF+Y+SL + P+
Sbjct: 244 MDALLTQVNYSAKKGVMLLFINQRLVESPALKSSLDGIYSTYLPRGQHPFIYMSLQLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL++D IIER++ +E LLGSN +R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQDEIIERIKEQVEAQLLGSNATRTFYKQ 348
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 161/210 (76%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQV VK GGLKLLQIQDNGTGIRK+D+ IVCE
Sbjct: 26 IIQRPANALKELLENSLDAK-----SSQIQVQVKAGGLKLLQIQDNGTGIRKDDLGIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL I+TFGFRGEALASISHVAH+ I TKTK PC Y+ASY D KL+
Sbjct: 81 RFTTSKLCKFEDLTQIATFGFRGEALASISHVAHMQIQTKTKQEPCGYKASYADGKLQGA 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFY++P RR+ALK P+EE+ K++DVVS+YAVHNPHVGFTLKKQ
Sbjct: 141 PKPCAGNQGTIITIEDLFYSMPQRRQALKSPAEEFQKLSDVVSKYAVHNPHVGFTLKKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
E ++T VNSS E I IYG+ IS+ +
Sbjct: 201 EAQPALKTPVNSSRKENIRIIYGSAISKEL 230
>gi|340725764|ref|XP_003401236.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Bombus
terrestris]
Length = 853
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 230/351 (65%), Gaps = 43/351 (12%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
MD KIK+LD+ VVNRIAAGEVIQRPANALKEL+ENSLDAK+T+IQ+ K+GGLKLLQI
Sbjct: 1 MDGTGKIKRLDKIVVNRIAAGEVIQRPANALKELMENSLDAKATNIQIIAKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---- 116
QDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGEALASISH++ LTI T
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQAFEDLQAISTFGFRGEALASISHISLLTITTKTAD 120
Query: 117 ------------KTKTSP--CAYRWCT--YLADLMALALMEMSQYLQRDKE--QIGDKEE 158
K K P CA T + +L + ++E +I D
Sbjct: 121 EKCAYKASYVDSKLKAPPKLCAGNQGTTILIENLFYNVATRRKAFSNPNEEFNKISDVVT 180
Query: 159 KQWYR--TVEHTL------VPLMKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDD 208
K TV TL P +++ + S + + I NN+ ELL VE TDD
Sbjct: 181 KYAIHNPTVGFTLKKHGEVTPQIRTPHNSS-----KMNNIRILYGNNVFRELLEVELTDD 235
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSL 262
++ K+ ITN N+++K+M FLLFINN I++M+E++Y+ Y+PK + P+ Y+SL
Sbjct: 236 TYRFKMHALITNPNYTSKRMIFLLFINNRLVESSSIRKMLEEIYTFYIPKKTHPWCYISL 295
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP+NVDVNVHPTKHEV FLHE++IIE+++ L++ L G++ S+ FY Q+
Sbjct: 296 EIDPQNVDVNVHPTKHEVKFLHENSIIEKMKLALDEKLSGNSASKTFYVQA 346
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 149/186 (80%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+IQ+ K+GGLKLLQIQDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGE
Sbjct: 42 KATNIQIIAKEGGLKLLQIQDNGTGIRKEDMEIVCERFTTSKLQAFEDLQAISTFGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH++ LTI TKT CAY+ASY+DSKLK P K CAGNQGT I+ E+LFYN+ TR
Sbjct: 102 ALASISHISLLTITTKTADEKCAYKASYVDSKLKAPPKLCAGNQGTTILIENLFYNVATR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKA P+EE+NKI+DVV++YA+HNP VGFTLKK E IRT NSS I +YGN
Sbjct: 162 RKAFSNPNEEFNKISDVVTKYAIHNPTVGFTLKKHGEVTPQIRTPHNSSKMNNIRILYGN 221
Query: 492 NISRRV 497
N+ R +
Sbjct: 222 NVFREL 227
>gi|196002717|ref|XP_002111226.1| hypothetical protein TRIADDRAFT_50100 [Trichoplax adhaerens]
gi|190587177|gb|EDV27230.1| hypothetical protein TRIADDRAFT_50100 [Trichoplax adhaerens]
Length = 733
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/348 (48%), Positives = 219/348 (62%), Gaps = 41/348 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLDE VVNRIAAGEVIQRPANA+KE++ENSLDAK+T IQVTVK GGLKL+QIQDNG
Sbjct: 4 KIQKLDEKVVNRIAAGEVIQRPANAIKEMIENSLDAKATLIQVTVKSGGLKLIQIQDNGH 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+KED+DIVCERFTTSKL++FEDL+S+ T+GFRGEALASISHVAH+ I+T+T+ S CAY
Sbjct: 64 GIKKEDLDIVCERFTTSKLSRFEDLSSMVTYGFRGEALASISHVAHVAIVTRTEDSKCAY 123
Query: 126 RWCTYLADLMALALMEMS---------------------------QYLQRDKEQIGDKEE 158
R TY M S + L+ E+ E
Sbjct: 124 R-ATYADGKMVPGQPNASADPKPCAGNVGTQINVEDLFFNTPLRLKALKNPNEEFNKITE 182
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDDAFQ 211
V V + +Y S V + + ++ + ELL V +
Sbjct: 183 VISRYAVHQEGVGFILKKYGDSNATVRTSGSSRLDNIRTIYGASTARELLEVSLENKKLG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
+ + G I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL +
Sbjct: 243 IGMNGLISNANYSAKKCIFLLFINHRLVECSNLRKAIENVYAAYLPKHTHPFLYLSLQIS 302
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+NVDVN+HPTKHEV FLHED II+ +Q+++E LLG+N+SR F Q+
Sbjct: 303 PRNVDVNMHPTKHEVQFLHEDKIIDAIQNVIENKLLGANSSRTFLAQT 350
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 150/199 (75%), Gaps = 10/199 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T IQVTVK GGLKL+QIQDNG GI+KED+DIVCERFTTSKL++FEDL+S+ T+GFRG
Sbjct: 39 AKATLIQVTVKSGGLKLIQIQDNGHGIKKEDLDIVCERFTTSKLSRFEDLSSMVTYGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAE 422
EALASISHVAH+ I+T+T+ S CAYRA+Y D K+ DP KPCAGN GTQI E
Sbjct: 99 EALASISHVAHVAIVTRTEDSKCAYRATYADGKMVPGQPNASADP-KPCAGNVGTQINVE 157
Query: 423 DLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
DLF+N P R KALK P+EE+NKI +V+SRYAVH VGF LKK ++ A +RT+ SS
Sbjct: 158 DLFFNTPLRLKALKNPNEEFNKITEVISRYAVHQEGVGFILKKYGDSNATVRTS-GSSRL 216
Query: 483 EVIGNIYGNNISRRVRRFS 501
+ I IYG + +R + S
Sbjct: 217 DNIRTIYGASTARELLEVS 235
>gi|195149506|ref|XP_002015698.1| GL11208 [Drosophila persimilis]
gi|194109545|gb|EDW31588.1| GL11208 [Drosophila persimilis]
Length = 675
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 219/348 (62%), Gaps = 43/348 (12%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDAKS+ IQV VK GGL LLQIQD
Sbjct: 6 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVHVKSGGLTLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED++IVCERFTTSKL +FEDL+ I+TFGFRGEALASISHVAHLTI TKT
Sbjct: 66 NGTGIRREDLEIVCERFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQER 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDK------EQIGDK 156
+ PCA T + DL MSQ Q K +++ D
Sbjct: 126 CGYKAIYADGRLQGQPKPCAGNQGTIITIEDL----FYNMSQRRQALKSPGDEFQKLSDV 181
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAF 210
K + + + QPS K E ++ A ++ ELL ++ F
Sbjct: 182 LAKYAVHNPQVGFTLRKQGEPQPSLKTPVASSRSENIRIIYGAGISK-ELLHFSHKNEVF 240
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ +V +T VN+S K+ LLFIN +K ++ VY+ YLP+G PFVY+SL +
Sbjct: 241 KFEVECLLTQVNYSAKRSQMLLFINQRLVESPALKCAVDAVYATYLPRGHHPFVYMSLKL 300
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P+N+DVNVHPTKHEVHFL++D I+ER++ +E LLGSNT+R FY Q
Sbjct: 301 PPQNLDVNVHPTKHEVHFLYQDEIVERLKEQVEIQLLGSNTTRTFYKQ 348
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQV VK GGL LLQIQDNGTGIR+ED++IVCE
Sbjct: 26 IIQRPANALKELLENSLDAK-----SSHIQVHVKSGGLTLLQIQDNGTGIRREDLEIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL+ I+TFGFRGEALASISHVAHLTI TKT C Y+A Y D +L+
Sbjct: 81 RFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQERCGYKAIYADGRLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+ RR+ALK P +E+ K++DV+++YAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIITIEDLFYNMSQRRQALKSPGDEFQKLSDVLAKYAVHNPQVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E ++T V SS SE I IYG IS+ + FS
Sbjct: 201 EPQPSLKTPVASSRSENIRIIYGAGISKELLHFS 234
>gi|198456278|ref|XP_001360282.2| GA11026 [Drosophila pseudoobscura pseudoobscura]
gi|198135556|gb|EAL24857.2| GA11026 [Drosophila pseudoobscura pseudoobscura]
Length = 675
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 219/348 (62%), Gaps = 43/348 (12%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDAKS+ IQV VK GGL LLQIQD
Sbjct: 6 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVHVKSGGLTLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED++IVCERFTTSKL +FEDL+ I+TFGFRGEALASISHVAHLTI TKT
Sbjct: 66 NGTGIRREDLEIVCERFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQER 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDK------EQIGDK 156
+ PCA T + DL MSQ Q K +++ D
Sbjct: 126 CGYKAIYADGRLQGQPKPCAGNQGTIITIEDL----FYNMSQRRQALKSPGDEFQKLSDV 181
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAF 210
K + + + QPS K E ++ A ++ ELL ++ F
Sbjct: 182 LAKYAVHNPQVGFTLRKQGEPQPSLKTPVASSRSENIRIIYGAGISK-ELLHFSHKNEVF 240
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ +V +T VN+S K+ LLFIN +K ++ VY+ YLP+G PFVY+SL +
Sbjct: 241 KFEVECLLTQVNYSAKRSQMLLFINQRLVESPALKCAVDAVYATYLPRGHHPFVYMSLKL 300
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P+N+DVNVHPTKHEVHFL++D I+ER++ +E LLGSNT+R FY Q
Sbjct: 301 PPQNLDVNVHPTKHEVHFLYQDEIVERLKEQVEIQLLGSNTTRTFYKQ 348
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S ++ S+ IQV VK GGL LLQIQDNGTGIR+ED++IVCE
Sbjct: 26 IIQRPANALKELLENSLDAK-----SSHIQVHVKSGGLTLLQIQDNGTGIRREDLEIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL+ I+TFGFRGEALASISHVAHLTI TKT C Y+A Y D +L+
Sbjct: 81 RFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQERCGYKAIYADGRLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+ RR+ALK P +E+ K++DV+++YAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIITIEDLFYNMSQRRQALKSPGDEFQKLSDVLAKYAVHNPQVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E ++T V SS SE I IYG IS+ + FS
Sbjct: 201 EPQPSLKTPVASSRSENIRIIYGAGISKELLHFS 234
>gi|340375542|ref|XP_003386293.1| PREDICTED: DNA mismatch repair protein Mlh1 [Amphimedon
queenslandica]
Length = 697
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 227/358 (63%), Gaps = 49/358 (13%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
MD+P I +L+++VVNRIAAGEVIQRPANA+KE++ENS+DA +T+IQV+VK GG+K+L I
Sbjct: 1 MDEPKGIVRLEQSVVNRIAAGEVIQRPANAIKEMIENSIDAGATTIQVSVKNGGIKMLLI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG+GI KED+ IVCERFTTSKL F+DL+SI+T+GFRGEALASISH+AH+TI ++TK
Sbjct: 61 QDNGSGISKEDLPIVCERFTTSKLKSFDDLSSINTYGFRGEALASISHIAHVTITSRTKN 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE-----EKQWYRTVE--------- 166
CAY+ L++ + S K G++ E +Y V
Sbjct: 121 DKCAYKASYSDGKLVS---TQKSSGPPEPKPCAGNRGTQIQVEDLFYNMVTRRNALKNPA 177
Query: 167 ---HTLVPLMKSQY------------QPSEKIVERACLLEIASLNNL----------ELL 201
H +V ++ S+Y + E +V+ L + + + N+ ELL
Sbjct: 178 DEYHRIVDVV-SKYAVHNTGIGFTLKKFGESVVDVRTLPDSSDIENIGAVFGQAIAKELL 236
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSF 255
V + +K+ G+ITN N+S KK FLLFIN+ +++ I+ VYS YLPK +
Sbjct: 237 CVSCENTKLGMKMNGYITNPNYSVKKFQFLLFINHRLVDSTSLRKAIDTVYSAYLPKNTH 296
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF+Y+SL + P NVDVNVHPTKHEVHFLHE I+E +Q +E LLG N SR +YTQ+
Sbjct: 297 PFIYMSLEIAPLNVDVNVHPTKHEVHFLHEALIVETIQKSIEDKLLGCNESRTYYTQT 354
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 151/194 (77%), Gaps = 10/194 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+IQV+VK GG+K+L IQDNG+GI KED+ IVCERFTTSKL F+DL+SI+T+GFRGEA
Sbjct: 43 ATTIQVSVKNGGIKMLLIQDNGSGISKEDLPIVCERFTTSKLKSFDDLSSINTYGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL---------KDPIKPCAGNQGTQIIAED 423
LASISH+AH+TI ++TK CAY+ASY D KL +P KPCAGN+GTQI ED
Sbjct: 103 LASISHIAHVTITSRTKNDKCAYKASYSDGKLVSTQKSSGPPEP-KPCAGNRGTQIQVED 161
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+ TRR ALK P++EY++I DVVS+YAVHN +GFTLKK E++ D+RT +SS E
Sbjct: 162 LFYNMVTRRNALKNPADEYHRIVDVVSKYAVHNTGIGFTLKKFGESVVDVRTLPDSSDIE 221
Query: 484 VIGNIYGNNISRRV 497
IG ++G I++ +
Sbjct: 222 NIGAVFGQAIAKEL 235
>gi|194863555|ref|XP_001970498.1| GG23342 [Drosophila erecta]
gi|190662365|gb|EDV59557.1| GG23342 [Drosophila erecta]
Length = 664
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/345 (48%), Positives = 220/345 (63%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+S+ IQV VK GGLKLLQIQD
Sbjct: 6 EPGFIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPAEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + QP+ + E ++ A+++ ELL D+ F+ +
Sbjct: 185 YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVFKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
IT VN+S K+ LLFIN + +K ++ VY+ YLP+G PFVY+SL + P+
Sbjct: 244 AECLITQVNYSAKRSQMLLFINQRLVESSALKTAVDSVYATYLPRGQHPFVYMSLTLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL+++ I++R++ +E LLGSN++R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQEEIVDRIKQQVEAQLLGSNSTRTFYKQ 348
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QS+ IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENS-----LDAQSSHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|195474635|ref|XP_002089596.1| GE19183 [Drosophila yakuba]
gi|194175697|gb|EDW89308.1| GE19183 [Drosophila yakuba]
Length = 664
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 218/348 (62%), Gaps = 43/348 (12%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+S+ IQV VK GGLKLLQIQD
Sbjct: 6 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVHVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTCFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLM------ALALMEMSQYLQRDKEQIGDK 156
PCA T + DL AL ++ LQR E +
Sbjct: 126 CGFKATYADGKLQGPPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEELQRLSEVLARY 185
Query: 157 EEKQWYRTVEHTL------VPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAF 210
TV TL P +++ S E ++ A+++ ELL D+ F
Sbjct: 186 AVHN--PTVGFTLRKQGDAQPALRTPVNSSRS--ENIRIIYGAAISK-ELLGFSHRDEVF 240
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ IT VN+S KK LLFIN +K ++ VY+ YLP+G PFVY+SL +
Sbjct: 241 KFDAECLITQVNYSAKKSQMLLFINQRLVESPALKTAVDSVYATYLPRGHHPFVYMSLTL 300
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P+N+DVNVHPTKHEVHFL+++ I++R++ +E LLGSN++R FY Q
Sbjct: 301 PPQNLDVNVHPTKHEVHFLYQEEIVDRIKQQVEAQLLGSNSTRTFYKQ 348
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QS+ IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENS-----LDAQSSHIQVHVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT FEDL+ I+TFGFRGEALASISHVAHL+I TKT C ++A+Y D KL+ P
Sbjct: 81 RFTTSKLTCFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGFKATYADGKLQGP 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEELQRLSEVLARYAVHNPTVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT VNSS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVNSSRSENIRIIYGAAISKELLGFS 234
>gi|17136968|ref|NP_477022.1| Mlh1, isoform A [Drosophila melanogaster]
gi|7304079|gb|AAF59117.1| Mlh1, isoform A [Drosophila melanogaster]
Length = 664
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/345 (48%), Positives = 217/345 (62%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
QP I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+ST IQV VK GGLKLLQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPAEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + QP+ + E ++ A+++ ELL D+ ++ +
Sbjct: 185 YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVYKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
IT VN+S KK LLFIN ++ ++ +Y+ YLP+G PFVY+SL + P+
Sbjct: 244 AECLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL+++ I++ ++ +E LLGSN +R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQ 348
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QST IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENS-----LDAQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|3192877|gb|AAC19117.1| mutL homolog [Drosophila melanogaster]
Length = 663
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/345 (48%), Positives = 217/345 (62%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
QP I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+ST IQV VK GGLKLLQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPAEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + QP+ + E ++ A+++ ELL D+ ++ +
Sbjct: 185 YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVYKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
IT VN+S KK LLFIN ++ ++ +Y+ YLP+G PFVY+SL + P+
Sbjct: 244 AECLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL+++ I++ ++ +E LLGSN +R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQ 348
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S + QST IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENSLDA-----QSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|442622879|ref|NP_001260799.1| Mlh1, isoform B [Drosophila melanogaster]
gi|440214195|gb|AGB93332.1| Mlh1, isoform B [Drosophila melanogaster]
Length = 663
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 218/347 (62%), Gaps = 42/347 (12%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
QP I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+ST IQV VK GGLKLLQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPAEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + QP+ + E ++ A+++ ELL D+ ++ +
Sbjct: 185 YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVYKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFINNPIKRMIEQ--------VYSIYLPKGSFPFVYLSLCMD 265
IT VN+S KK LLFIN +R++E +Y+ YLP+G PFVY+SL +
Sbjct: 244 AECLITQVNYSAKKCQMLLFIN---QRLVESTGLTSVDSIYATYLPRGHHPFVYMSLTLP 300
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P+N+DVNVHPTKHEVHFL+++ I++ ++ +E LLGSN +R FY Q
Sbjct: 301 PQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQ 347
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S + QST IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENSLDA-----QSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|241558624|ref|XP_002400269.1| DNA mismatch repair protein mlh1, putative [Ixodes scapularis]
gi|215499751|gb|EEC09245.1| DNA mismatch repair protein mlh1, putative [Ixodes scapularis]
Length = 668
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/352 (48%), Positives = 221/352 (62%), Gaps = 35/352 (9%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI++LDETV NRIAAGEVIQRPANALKE+LENS+DA++T+IQV K GGLKLLQIQD
Sbjct: 6 EPAKIRRLDETVTNRIAAGEVIQRPANALKEMLENSIDARATNIQVVAKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS- 121
NG GIRKED+DIVCERFTTSKL +FEDL +IST+GFRGEALASIS+VAH+TI TKT S
Sbjct: 66 NGCGIRKEDLDIVCERFTTSKLVKFEDLATISTYGFRGEALASISYVAHVTITTKTADSQ 125
Query: 122 -----------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
PCA T + DL + + + E+ G +
Sbjct: 126 CAFKVSYRSGKPTGPPKPCAGNQGTQIVVEDLFYNVPTRKNAF-KSPAEEYGRLVDVVSR 184
Query: 163 RTVEHTLVPLMKSQYQPS----EKIVERACLLEIASLN----NLELLSVEGTDDAFQLKV 214
V + V + + S V+ L IA++ + +LL VE + + ++
Sbjct: 185 YAVHNAGVGFSIKKAEESATDVRTTVDDDTLQSIATIYGKTVSRDLLPVECDNPDLKFRL 244
Query: 215 TGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
G+++N N S KK T LLFIN+ +++ IE +Y+ YLPK + P++YLSL + P N
Sbjct: 245 KGFVSNANCSYKKCTLLLFINHRLVESSSLRKAIESIYASYLPKNAHPWLYLSLEIHPAN 304
Query: 269 VDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
VDVNVHPTK EVHFLHED I+E VQ ++ LL N+SR + TQS Q+ V
Sbjct: 305 VDVNVHPTKKEVHFLHEDLILEAVQKAVDGALLACNSSRTYLTQSRLPQINV 356
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 155/208 (74%), Gaps = 5/208 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R + L++ L S +R +T+IQV K GGLKLLQIQDNG GIRKED+DIVCE
Sbjct: 26 VIQRPANALKEMLENSIDAR-----ATNIQVVAKAGGLKLLQIQDNGCGIRKEDLDIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDL +IST+GFRGEALASIS+VAH+TI TKT S CA++ SY K P
Sbjct: 81 RFTTSKLVKFEDLATISTYGFRGEALASISYVAHVTITTKTADSQCAFKVSYRSGKPTGP 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGTQI+ EDLFYN+PTR+ A K P+EEY ++ DVVSRYAVHN VGF++KK
Sbjct: 141 PKPCAGNQGTQIVVEDLFYNVPTRKNAFKSPAEEYGRLVDVVSRYAVHNAGVGFSIKKAE 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
E+ D+RT V+ + I IYG +SR
Sbjct: 201 ESATDVRTTVDDDTLQSIATIYGKTVSR 228
>gi|195581491|ref|XP_002080567.1| GD10548 [Drosophila simulans]
gi|194192576|gb|EDX06152.1| GD10548 [Drosophila simulans]
Length = 664
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 217/345 (62%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+S+ IQV VK GGLKLLQIQD
Sbjct: 6 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSHIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPAEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + + QP+ + E ++ A+++ ELL D+ F+ +
Sbjct: 185 YAVHNPRVGFTLRKQGEAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVFKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
I+ VN+S KK LLFIN ++ ++ VY+ YLP+G PFVY+SL + P+
Sbjct: 244 AECLISQVNYSAKKCQMLLFINQRLVESTALRTSVDSVYATYLPRGHHPFVYMSLTLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL+++ I + ++ +E LLGSN +R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQEEIADSIKQQVEARLLGSNATRTFYKQ 348
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QS+ IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENS-----LDAQSSHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSHIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
E +RT V SS SE I IYG IS+ + FS
Sbjct: 201 EAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|195332392|ref|XP_002032882.1| GM21014 [Drosophila sechellia]
gi|194124852|gb|EDW46895.1| GM21014 [Drosophila sechellia]
Length = 664
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/345 (48%), Positives = 216/345 (62%), Gaps = 37/345 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+S+ IQV VK GGLKLLQIQD
Sbjct: 6 EPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT---- 118
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 119 --------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
+ PCA T + DL + + Q L+ E+ E
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLF-YNMPQRRQALRSPGEEFQRLSEVLAR 184
Query: 163 RTVEHTLVPLM---KSQYQPSEKI------VERACLLEIASLNNLELLSVEGTDDAFQLK 213
V + V + QP+ + E ++ A+++ ELL D+ F+ +
Sbjct: 185 YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK-ELLEFSHRDEVFKFE 243
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
IT VN+S KK LLFIN ++ ++ VY+ YLP+G PFVY+SL + P+
Sbjct: 244 AECLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSVYATYLPRGHHPFVYMSLTLPPQ 303
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
N+DVNVHPTKHEVHFL+++ I + ++ +E LLGSN +R FY Q
Sbjct: 304 NLDVNVHPTKHEVHFLYQEEIADSIKQQVEARLLGSNATRTFYKQ 348
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S QS+ IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANALKELLENS-----LDAQSSHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPGEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
>gi|47216556|emb|CAG04734.1| unnamed protein product [Tetraodon nigroviridis]
Length = 816
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 222/361 (61%), Gaps = 63/361 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KEL+EN LDAKST+IQVTVK GGLKLLQIQDNGTG
Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKLLQIQDNGTG 64
Query: 67 IR-KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE------------------------ 101
IR KEDM+IVCERFTTSKL FEDL++I+T+GFRGE
Sbjct: 65 IRQKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEVSFSLCTIKKQILTILVRLFFNPS 124
Query: 102 -----ALASISHVAHLTIITKTKTSPCAYRWCTYL-----ADLMALALMEMSQYLQRDKE 151
ALASISHVAH+TI TKT + CAYR +Y + A + +Q L D+
Sbjct: 125 HSYLQALASISHVAHVTITTKTADAKCAYR-ASYTDGKPKSPPKPCAGNQGTQIL--DEY 181
Query: 152 QIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVE--RACLLEIASLNNLELLSVEGTDDA 209
I + + + TL + + P+ +V+ R S EL+ + D
Sbjct: 182 AIHNSGKGFSVKKQGETLADV---RTLPNASVVDNIRGVFGNTVS---RELIEIGCEDQK 235
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFIN-----------------NPIKRMIEQVYSIYLPK 252
K+ G+I+N N+S KK +LFIN + +K+ IE VY+ YLPK
Sbjct: 236 LAFKMKGYISNANYSVKKCILILFINRTCSWTDSGLLDRLVESSALKKAIESVYAAYLPK 295
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+N+DVNVHPTKHEVHFLHED++IE VQ +E LLGS +SR ++TQ
Sbjct: 296 NTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSVIENVQKHIESKLLGSGSSRTYFTQ 355
Query: 313 S 313
+
Sbjct: 356 T 356
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 130/217 (59%), Gaps = 59/217 (27%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIR-KEDMDIVCERFTTSKLTQFEDLNSISTFGFR 369
+ST+IQVTVK GGLKLLQIQDNGTGIR KEDM+IVCERFTTSKL FEDL++I+T+GFR
Sbjct: 39 AKSTNIQVTVKDGGLKLLQIQDNGTGIRQKEDMEIVCERFTTSKLQTFEDLSAIATYGFR 98
Query: 370 GE-----------------------------ALASISHVAHLTIITKTKTSPCAYRASYI 400
GE ALASISHVAH+TI TKT + CAYRASY
Sbjct: 99 GEVSFSLCTIKKQILTILVRLFFNPSHSYLQALASISHVAHVTITTKTADAKCAYRASYT 158
Query: 401 DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
D K K P KPCAGNQGTQI+ E YA+HN G
Sbjct: 159 DGKPKSPPKPCAGNQGTQILDE-----------------------------YAIHNSGKG 189
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F++KKQ E LAD+RT N+S + I ++GN +SR +
Sbjct: 190 FSVKKQGETLADVRTLPNASVVDNIRGVFGNTVSREL 226
>gi|291231519|ref|XP_002735708.1| PREDICTED: MutL protein homolog 1-like [Saccoglossus kowalevskii]
Length = 790
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/357 (47%), Positives = 217/357 (60%), Gaps = 55/357 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKS++IQVTVK GGLKL+QI
Sbjct: 1 MTEGSVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSSNIQVTVKSGGLKLIQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL +FEDL +I T+GFRGEALASISHVAH+TI T+T
Sbjct: 61 QDNGTGIRKEDMNIVCERFTTSKLRKFEDLQNIETYGFRGEALASISHVAHVTITTRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS 180
S CA++ Y+ + A+ K G+K + + + + K+ P
Sbjct: 121 SKCAFKG-NYIDGQLKGAV----------KPCAGNKGTQITVEDLFYNVSTRRKALKSPG 169
Query: 181 E---KIVERACLLEIASLNNLELLSVEGTDDA-----------------FQLKVTGWITN 220
E KI E I + L +G A + V +
Sbjct: 170 EEHNKISEVISRYAIHNAGVAFTLKKQGESVADVRTPSSASKIDNIRTIYGASVARELLE 229
Query: 221 VNFSTKKMTF------------------LLFINN------PIKRMIEQVYSIYLPKGSFP 256
V+F K++F LLFIN+ +++ IE VY+ YLPK S P
Sbjct: 230 VSFQNSKLSFKVSGYVSNANYSVKKCIFLLFINHRLVESSALRKTIEAVYTSYLPKNSHP 289
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
F+YLSL + P+NVDVNVHPTKHEVHFLHED I+E +Q +E+ LLG+N SR F+TQ+
Sbjct: 290 FLYLSLEISPQNVDVNVHPTKHEVHFLHEDMILEEIQQCVEQKLLGANASRTFFTQA 346
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 157/190 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+S++IQVTVK GGLKL+QIQDNGTGIRKEDM+IVCERFTTSKL +FEDL +I T+GFRGE
Sbjct: 42 KSSNIQVTVKSGGLKLIQIQDNGTGIRKEDMNIVCERFTTSKLRKFEDLQNIETYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI T+T S CA++ +YID +LK +KPCAGN+GTQI EDLFYN+ TR
Sbjct: 102 ALASISHVAHVTITTRTADSKCAFKGNYIDGQLKGAVKPCAGNKGTQITVEDLFYNVSTR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK P EE+NKI++V+SRYA+HN V FTLKKQ E++AD+RT ++S + I IYG
Sbjct: 162 RKALKSPGEEHNKISEVISRYAIHNAGVAFTLKKQGESVADVRTPSSASKIDNIRTIYGA 221
Query: 492 NISRRVRRFS 501
+++R + S
Sbjct: 222 SVARELLEVS 231
>gi|380488504|emb|CCF37330.1| DNA mismatch repair protein, partial [Colletotrichum higginsianum]
Length = 422
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 217/350 (62%), Gaps = 44/350 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P NALKEL+ENS+DA +T+++V VK GGLKLLQI DNG
Sbjct: 32 RIRALDPNVVNKIAAGEIIVAPVNALKELIENSVDAGATALEVLVKDGGLKLLQITDNGC 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+KEDMDI+CER TTSK+T FEDL SI+T+GFRGEALASISH+AHL++ TKTK S CA+
Sbjct: 92 GIQKEDMDILCERHTTSKITAFEDLASIATYGFRGEALASISHIAHLSVTTKTKDSDCAW 151
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPL 172
R YL +A A E R QI ++ ++ +R+ E+ +
Sbjct: 152 R-AAYLDGKLAPAKPGQSAEPKPTAGRQGTQISVEDMFYNIPTRRRAFRSPAEEYNKIID 210
Query: 173 MKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGTDDA 209
+ +Y Q + V+R + +S+ N EL+ ++D
Sbjct: 211 IVGRYAIHCKGVAFSCKKYGESGTSVSIQATATEVDRIRQIHGSSVAN-ELMQFSTSEDR 269
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ K TGW TN N++ KK TFLLFIN+ IK+ +EQ+YS +LPKG PF+Y+SL
Sbjct: 270 WGFKATGWATNANYNIKKTTFLLFINHRCVESTNIKKALEQLYSSFLPKGGRPFIYISLE 329
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP VDVNVHPTK EVHFL+ED II+ + + L +TSR F TQS
Sbjct: 330 IDPARVDVNVHPTKQEVHFLNEDDIIQSICEHIRSQLAEVDTSRTFMTQS 379
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 147/199 (73%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+++V VK GGLKLLQI DNG GI+KEDMDI+CER TTSK+T FEDL SI+T+GFRGEA
Sbjct: 69 ATALEVLVKDGGLKLLQITDNGCGIQKEDMDILCERHTTSKITAFEDLASIATYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S CA+RA+Y+D KL +P KP AG QGTQI ED+
Sbjct: 129 LASISHIAHLSVTTKTKDSDCAWRAAYLDGKLAPAKPGQSAEP-KPTAGRQGTQISVEDM 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + P+EEYNKI D+V RYA+H V F+ KK E+ + ++ +
Sbjct: 188 FYNIPTRRRAFRSPAEEYNKIIDIVGRYAIHCKGVAFSCKKYGESGTSVSIQATATEVDR 247
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G++++ + +FS++
Sbjct: 248 IRQIHGSSVANELMQFSTS 266
>gi|310795119|gb|EFQ30580.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001]
Length = 743
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 222/375 (59%), Gaps = 51/375 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P NALKEL+ENS+DA +T+++V VK+GGLKLLQI DNG
Sbjct: 31 RIRALDPNVVNKIAAGEIIVAPVNALKELIENSVDAGATALEVLVKEGGLKLLQITDNGC 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+KED++I+CER TTSK+T FEDL SI+T+GFRGEALASISH+AHL++ TKT+ S CA+
Sbjct: 91 GIQKEDLEILCERHTTSKITAFEDLASIATYGFRGEALASISHIAHLSVTTKTRESECAW 150
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTVEHTLVPLM- 173
R TYL +A A E R QI ++ ++ +R+ ++
Sbjct: 151 R-ATYLDGKLAPAKPGQSAEPKPTAGRQGTQISVEDMFYNIPTRRRAFRSPGEEFNKIID 209
Query: 174 ----------------KSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDDAF 210
K + + +A E+ + + EL+ ++D +
Sbjct: 210 IVGRYAIHCKGVAFSCKKHGESGASVSVQASATEVDRIRQIYGSGVANELMHFSTSEDRW 269
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K TGW TN N+S KK TFLLFIN+ IK+ +EQ+YS +LPKG PF+YLSL +
Sbjct: 270 GFKATGWATNANYSIKKTTFLLFINHRCVDSTSIKKALEQLYSSFLPKGGRPFIYLSLEI 329
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
DP VDVNVHPTK EVHFL+ED II+ + + L + SR F TQS G
Sbjct: 330 DPARVDVNVHPTKQEVHFLNEDEIIQSICEHIRSKLAEVDASRTFMTQSL-------LPG 382
Query: 325 LKLLQI--QDNGTGI 337
++ + QD G G+
Sbjct: 383 SHMMDVTSQDEGDGV 397
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 147/199 (73%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+++V VK+GGLKLLQI DNG GI+KED++I+CER TTSK+T FEDL SI+T+GFRGEA
Sbjct: 68 ATALEVLVKEGGLKLLQITDNGCGIQKEDLEILCERHTTSKITAFEDLASIATYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHL++ TKT+ S CA+RA+Y+D KL +P KP AG QGTQI ED+
Sbjct: 128 LASISHIAHLSVTTKTRESECAWRATYLDGKLAPAKPGQSAEP-KPTAGRQGTQISVEDM 186
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + P EE+NKI D+V RYA+H V F+ KK E+ A + +++ +
Sbjct: 187 FYNIPTRRRAFRSPGEEFNKIIDIVGRYAIHCKGVAFSCKKHGESGASVSVQASATEVDR 246
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG+ ++ + FS++
Sbjct: 247 IRQIYGSGVANELMHFSTS 265
>gi|156540257|ref|XP_001602327.1| PREDICTED: DNA mismatch repair protein Mlh1 [Nasonia vitripennis]
Length = 708
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 214/336 (63%), Gaps = 38/336 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ P IKKLDETVVN IAAGE+IQRPANALKEL+ENSLDAK+T+IQV V++GG+KLLQ+
Sbjct: 1 MECPASIKKLDETVVNLIAAGEIIQRPANALKELIENSLDAKATNIQVFVREGGMKLLQV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNGTGIRK+++DIVCERFTTSKL F+DL SISTFGFRGEALASISHV++ TI TKTK
Sbjct: 61 VDNGTGIRKDNLDIVCERFTTSKLQTFDDLKSISTFGFRGEALASISHVSYFTITTKTKA 120
Query: 121 SPCAYRWCTYLADLM-----------ALALMEMSQY--------LQRDKEQIGDKEEKQW 161
CAY+ L + +E Y L E++ E
Sbjct: 121 EKCAYKASYSRGKLKEPPTPCAGNQGTIITVENLFYNVSIRKKALNSSSEELSKILEVVT 180
Query: 162 YRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQ 211
V + V +Y + ++ C +++N+ ELL V+ D +
Sbjct: 181 RYAVHNPSVGFTLKKYGEAVNLIRTPC--SSTNISNIRLLFGTAIAKELLEVKLDDAKHK 238
Query: 212 LKVTGWITNVNF-STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K+ +TN N+ S K+MT LLFIN+ +KR ++ +YS+YLPK ++P+ Y+SL +
Sbjct: 239 FKLHALVTNANYISGKRMTLLLFINHRLVHSSAMKRTLQDMYSVYLPKKAYPWCYISLEI 298
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P+NVDVNVHPTK+EV FLHE+ II++++ +L + L
Sbjct: 299 EPQNVDVNVHPTKNEVRFLHEEAIIKKIKILLNEKL 334
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 5/218 (2%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V+ + II+R + L++ + S ++ +T+IQV V++GG+KLLQ+ DNGTGIRK
Sbjct: 15 VNLIAAGEIIQRPANALKELIENSLDAK-----ATNIQVFVREGGMKLLQVVDNGTGIRK 69
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
+++DIVCERFTTSKL F+DL SISTFGFRGEALASISHV++ TI TKTK CAY+ASY
Sbjct: 70 DNLDIVCERFTTSKLQTFDDLKSISTFGFRGEALASISHVSYFTITTKTKAEKCAYKASY 129
Query: 400 IDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
KLK+P PCAGNQGT I E+LFYN+ R+KAL SEE +KI +VV+RYAVHNP V
Sbjct: 130 SRGKLKEPPTPCAGNQGTIITVENLFYNVSIRKKALNSSSEELSKILEVVTRYAVHNPSV 189
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
GFTLKK E + IRT +S++ I ++G I++ +
Sbjct: 190 GFTLKKYGEAVNLIRTPCSSTNISNIRLLFGTAIAKEL 227
>gi|326922189|ref|XP_003207334.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Meleagris
gallopavo]
Length = 811
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/283 (53%), Positives = 191/283 (67%), Gaps = 24/283 (8%)
Query: 38 SLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFG 97
SLDAKSTSIQV VK+GGLKL+Q+QDNG GIRKED+ IVCERFTTSKL +FEDL SIST+G
Sbjct: 130 SLDAKSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYG 189
Query: 98 FRGEALASISHVAHLTIITKTKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE 157
FRGEALASISHVAH+T+ TKT + CAYR+ +Y + + + ++ GD
Sbjct: 190 FRGEALASISHVAHVTVTTKTADAKCAYRYASYYPSNLCCGYAIHNSGISFSVKKQGDTV 249
Query: 158 EKQWYRTVEH-TLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
RT+ + T V ++S + V R EL+ V D K+ G
Sbjct: 250 SD--VRTLANATTVDNIRSIFG---NAVSR------------ELIEVGCEDANLAFKMKG 292
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ITN N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + PKNVD
Sbjct: 293 YITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAPKNVD 352
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 353 VNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQT 395
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 116/187 (62%), Gaps = 45/187 (24%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+Q+QDNG GIRKED+ IVCERFTTSKL +FEDL SIST+GFRGE
Sbjct: 134 KSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGE 193
Query: 372 ALASISHVAHLTIITKTKTSPCAYR-ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
ALASISHVAH+T+ TKT + CAYR ASY S L C G
Sbjct: 194 ALASISHVAHVTVTTKTADAKCAYRYASYYPSNL------CCG----------------- 230
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
YA+HN + F++KKQ + ++D+RT N++ + I +I+G
Sbjct: 231 ---------------------YAIHNSGISFSVKKQGDTVSDVRTLANATTVDNIRSIFG 269
Query: 491 NNISRRV 497
N +SR +
Sbjct: 270 NAVSREL 276
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 394 AYRASYIDSKLKDPIKPCAGNQGTQII 420
A ASY D K+K P KPCAGNQGTQI+
Sbjct: 91 AAPASYSDGKIKAPPKPCAGNQGTQIM 117
>gi|170097253|ref|XP_001879846.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645249|gb|EDR09497.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 690
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 208/358 (58%), Gaps = 41/358 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I++L E+++NRIAAGE+I RPA+ALKELLENSLDA +TSI+V VK GG+KLLQIQD
Sbjct: 7 EPRPIRRLQESLINRIAAGEIIHRPASALKELLENSLDAGATSIRVIVKDGGMKLLQIQD 66
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS- 121
NG GIRK D+ I+ ERFTTSKL+ F DL+ I+T+GFRGEALASISHVAHL++ITKTK+
Sbjct: 67 NGCGIRKSDLPILAERFTTSKLSTFSDLSRIATYGFRGEALASISHVAHLSVITKTKSDT 126
Query: 122 ------------------------PCAYRWCTYL--ADLMALALMEMSQYLQRDKEQIGD 155
PCA T + DL L +S +E
Sbjct: 127 CAWKAYYLDGSLVEPKPGQTPDPKPCAGNDGTIINVQDLFYNTLTRLSSIRSTSEEYARI 186
Query: 156 KEEKQWYRTVEHTLVPLMKSQ-------YQPSEKIVERACLLEIASLNNLELLSV-EGTD 207
+ Y + L K PS+ + A L EL++V E D
Sbjct: 187 LDVLTKYSVHNPKIAFLCKKAGSAAPDLSTPSDSEISHAIRLLYGHSIAKELINVKEDND 246
Query: 208 DAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLS 261
++ + TN N+ KKM FLLFIN+ + KR +E VY LPKG+ PFVYLS
Sbjct: 247 ESESWSAESYFTNTNYQAKKMVFLLFINHRLVESPRMKRSLEAVYHTILPKGASPFVYLS 306
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
L +DP+ VDVNVHPTK EVHFL+ED IIERV +++ L SR F Q TS+ +
Sbjct: 307 LNIDPRAVDVNVHPTKREVHFLNEDAIIERVSDAIQQALAAQGKSRAFEYQVTSLSFS 364
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 146/217 (67%), Gaps = 12/217 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L S +TSI+V VK GG+KLLQIQDNG GIRK D+ I+ E
Sbjct: 27 IIHRPASALKELLENS-----LDAGATSIRVIVKDGGMKLLQIQDNGCGIRKSDLPILAE 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL+ F DL+ I+T+GFRGEALASISHVAHL++ITKTK+ CA++A Y+D L +P
Sbjct: 82 RFTTSKLSTFSDLSRIATYGFRGEALASISHVAHLSVITKTKSDTCAWKAYYLDGSLVEP 141
Query: 408 -------IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
KPCAGN GT I +DLFYN TR +++ SEEY +I DV+++Y+VHNP +
Sbjct: 142 KPGQTPDPKPCAGNDGTIINVQDLFYNTLTRLSSIRSTSEEYARILDVLTKYSVHNPKIA 201
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F KK D+ T +S S I +YG++I++ +
Sbjct: 202 FLCKKAGSAAPDLSTPSDSEISHAIRLLYGHSIAKEL 238
>gi|328771889|gb|EGF81928.1| hypothetical protein BATDEDRAFT_33018 [Batrachochytrium
dendrobatidis JAM81]
Length = 664
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 234/433 (54%), Gaps = 67/433 (15%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+IK+LDE VNRIAAGE+I RPANALKELLENSLDA ST+IQ+ +K+GGLKLLQIQDNG
Sbjct: 8 PRIKRLDEVTVNRIAAGEIIHRPANALKELLENSLDAGSTAIQIILKEGGLKLLQIQDNG 67
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS--- 121
GI K+D+ IVCERFTTSKL+++EDLN I+T+GFRGEALASISH+AHL+I T+T S
Sbjct: 68 HGINKDDLSIVCERFTTSKLSKYEDLNKIATYGFRGEALASISHIAHLSITTRTVDSFCS 127
Query: 122 ----------------------PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKE 157
PCA T ++ DL + ++E E
Sbjct: 128 WRACYSDGKLVSAKPGGSVDPKPCAGNVGTLISAEDLFHNVPIRRKSLNNTNEEYNRVLE 187
Query: 158 EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTD 207
Q Y + + K Q + +I + + L+N+ ELL
Sbjct: 188 VVQRYAIHNNNVSFTCKKQ---NAQISDLQTPSSASKLDNIRTVFGNTVARELLEFTVDS 244
Query: 208 DAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLS 261
++ K +G+I+N NF+ KK LLFIN+ IK+ +E +YS YLPK + PF Y+S
Sbjct: 245 ARWEFKASGYISNANFNMKKFHLLLFINHRLVENHNIKKSLEALYSKYLPKRTHPFAYIS 304
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS------ 315
L + P+N+DVNVHPTK V FLHED+IIE + + L +N SRV+Y Q+ S
Sbjct: 305 LEIKPQNLDVNVHPTKRIVQFLHEDSIIEVLCDAADSLLAEANNSRVYYMQAKSKRPPEH 364
Query: 316 ---------------IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDL 360
IQ T K+ + + + G + DM I ++ QF D+
Sbjct: 365 KFVRTDNRVRTLDEYIQHTPSGSTDKVDRTRTDAAGNDETDMSITSQKEVPIPDRQFVDV 424
Query: 361 NSISTFGFRGEAL 373
S R E +
Sbjct: 425 RLTSVLELRNEVI 437
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 151/200 (75%), Gaps = 9/200 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+IQ+ +K+GGLKLLQIQDNG GI K+D+ IVCERFTTSKL+++EDLN I+T+GFRGEA
Sbjct: 46 STAIQIILKEGGLKLLQIQDNGHGINKDDLSIVCERFTTSKLSKYEDLNKIATYGFRGEA 105
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHL+I T+T S C++RA Y D KL DP KPCAGN GT I AEDL
Sbjct: 106 LASISHIAHLSITTRTVDSFCSWRACYSDGKLVSAKPGGSVDP-KPCAGNVGTLISAEDL 164
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N+P RRK+L +EEYN++ +VV RYA+HN +V FT KKQN ++D++T ++S +
Sbjct: 165 FHNVPIRRKSLNNTNEEYNRVLEVVQRYAIHNNNVSFTCKKQNAQISDLQTPSSASKLDN 224
Query: 485 IGNIYGNNISRRVRRFSSAS 504
I ++GN ++R + F+ S
Sbjct: 225 IRTVFGNTVARELLEFTVDS 244
>gi|345570641|gb|EGX53462.1| hypothetical protein AOL_s00006g328 [Arthrobotrys oligospora ATCC
24927]
Length = 774
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 212/353 (60%), Gaps = 42/353 (11%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+ P +IK L +TVVN+IAAGE+I P +ALKELLEN++DA STSI+V VK GGLK+LQI
Sbjct: 38 NAPRRIKALSQTVVNKIAAGEIIVAPVHALKELLENAVDAGSTSIEVVVKDGGLKMLQIT 97
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG+GI K+DM I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL++ T+TK S
Sbjct: 98 DNGSGINKDDMGILCERFTTSKLKTFEDLASIGTYGFRGEALASISHIAHLSVTTRTKDS 157
Query: 122 PCAYRWCTYLADLMAL---ALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTL 169
CA+R L+ E R QI ++ ++ +R E++
Sbjct: 158 DCAWRALYSDGKLIPPKPGGSAEPKAVAGRQGTQITVEDLFYNVPSRRRAFRNTNEEYSK 217
Query: 170 VPLMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGT 206
V M +Y Q + K ++R + ++ N EL+ +
Sbjct: 218 VLDMVGKYAIHCDGIAFSCKKHGESSMGVAIQSTAKTIDRVRQIYGNAVAN-ELIPFKIE 276
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYL 260
D K G ITN N+S KK T LLFIN+ I++ +E VYS +LPKG P++Y
Sbjct: 277 DQKLGFKAKGLITNANYSIKKTTMLLFINHRCVESTAIRKSLESVYSAFLPKGGHPYIYA 336
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
++ ++P +DVNVHPTK EV+FLHED IIER+ +++ L +TSR F TQ+
Sbjct: 337 TIEIEPHRIDVNVHPTKREVNFLHEDEIIERISDAVQEKLAAVDTSRSFMTQT 389
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 135/200 (67%), Gaps = 7/200 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLK+LQI DNG+GI K+DM I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 79 STSIEVVVKDGGLKMLQITDNGSGINKDDMGILCERFTTSKLKTFEDLASIGTYGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL++ T+TK S CA+RA Y D KL P K AG QGTQI EDLF
Sbjct: 139 LASISHIAHLSVTTRTKDSDCAWRALYSDGKLIPPKPGGSAEPKAVAGRQGTQITVEDLF 198
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+P+RR+A + +EEY+K+ D+V +YA+H + F+ KK E+ + + + +
Sbjct: 199 YNVPSRRRAFRNTNEEYSKVLDMVGKYAIHCDGIAFSCKKHGESSMGVAIQSTAKTIDRV 258
Query: 486 GNIYGNNISRRVRRFSSASQ 505
IYGN ++ + F Q
Sbjct: 259 RQIYGNAVANELIPFKIEDQ 278
>gi|171690550|ref|XP_001910200.1| hypothetical protein [Podospora anserina S mat+]
gi|170945223|emb|CAP71334.1| unnamed protein product [Podospora anserina S mat+]
Length = 747
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 210/356 (58%), Gaps = 56/356 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LDE V+N+IAAGE+I P NALKEL+ENS+DA ST++ V+VK+GGLKLLQI DNG+
Sbjct: 32 RIKPLDEDVINKIAAGEIIVAPVNALKELMENSVDAGSTTVDVSVKEGGLKLLQITDNGS 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+C+RFTTSKL +FEDL +I+T+GFRGEALASISH+AHLT+ TKT+ S CA+
Sbjct: 92 GIEKEDLPILCQRFTTSKLQKFEDLQTIATYGFRGEALASISHIAHLTVTTKTRDSECAW 151
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQ----- 178
R Y + ++ A S D + + ++ Q TVE VP + ++
Sbjct: 152 RG-HYGSGVLVPAKPGQSP----DPKPVSGRQGTQI--TVEDLFFNVPTRRRAFRSPANE 204
Query: 179 -----------------------------------PSEKIVERACLLEIASLNNLELLSV 203
P+ ++R + AS+ N EL
Sbjct: 205 YNKILDMVGRYAIHCTGVGFTCKKHGESSKGISVSPTAPCLDRIRQIYGASVAN-ELTEF 263
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPF 257
E DD + K G TN N+ TKK T LLFINN I++ +EQ Y+ +LPK PF
Sbjct: 264 ETKDDQWGFKAKGLATNANYRTKKTTLLLFINNRCVESTNIRKALEQTYASFLPKNGHPF 323
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VYLSL +DP+ VDVNVHPTK EV+FL+ED I+ V L L + SR F TQ+
Sbjct: 324 VYLSLEIDPRRVDVNVHPTKQEVNFLNEDETIQAVCEHLRSKLAEVDASRTFLTQT 379
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 139/198 (70%), Gaps = 9/198 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++ V+VK+GGLKLLQI DNG+GI KED+ I+C+RFTTSKL +FEDL +I+T+GFRGEA
Sbjct: 69 STTVDVSVKEGGLKLLQITDNGSGIEKEDLPILCQRFTTSKLQKFEDLQTIATYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT+ S CA+R Y L DP KP +G QGTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTRDSECAWRGHYGSGVLVPAKPGQSPDP-KPVSGRQGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N+PTRR+A + P+ EYNKI D+V RYA+H VGFT KK E+ I + + +
Sbjct: 188 FFNVPTRRRAFRSPANEYNKILDMVGRYAIHCTGVGFTCKKHGESSKGISVSPTAPCLDR 247
Query: 485 IGNIYGNNISRRVRRFSS 502
I IYG +++ + F +
Sbjct: 248 IRQIYGASVANELTEFET 265
>gi|402082737|gb|EJT77755.1| DNA mismatch repair protein mutL [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 755
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 210/354 (59%), Gaps = 44/354 (12%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA STS++V + GGLKLLQI
Sbjct: 22 EAPRRIKALHQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLCRDGGLKLLQIT 81
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKTK
Sbjct: 82 DNGCGIDKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISHIAHLTVTTKTKNE 141
Query: 122 PCAYRWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHT 168
CA+R Y A +A A E R QI ++ ++ +R+ E+
Sbjct: 142 ACAWR-AHYDAGRLAPAKPGQSPEPKAVAGRQGTQITVEDLFYNVPSRRRAFRSASDEYN 200
Query: 169 LVPLMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEG 205
+ M +Y Q + + +R + + + N ELL E
Sbjct: 201 KIIDMVGRYAVHCRHVAFSCKKHGESTTTIAVQAAASVADRIRQIHGSPVAN-ELLDFET 259
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVY 259
D + GW TN N+S K+ T LLFINN +K+ +EQ Y+ +LPK PF+Y
Sbjct: 260 ADPRWGFAARGWCTNANYSVKRTTLLLFINNRCVESTNVKKAVEQTYAAFLPKNGHPFLY 319
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL +DP+ VDVNVHPTK EV+FL+ED II+ V L L +TSR F TQ+
Sbjct: 320 LSLEIDPQRVDVNVHPTKREVNFLNEDEIIQAVCEHLRTRLAAVDTSRTFKTQT 373
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 138/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V + GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 63 STSLEVLCRDGGLKLLQITDNGCGIDKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK CA+RA Y +L P KP AG QGTQI EDL
Sbjct: 123 LASISHIAHLTVTTKTKNEACAWRAHYDAGRLA-PAKPGQSPEPKAVAGRQGTQITVEDL 181
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P+RR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I +S ++
Sbjct: 182 FYNVPSRRRAFRSASDEYNKIIDMVGRYAVHCRHVAFSCKKHGESTTTIAVQAAASVADR 241
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G+ ++ + F +A
Sbjct: 242 IRQIHGSPVANELLDFETA 260
>gi|429858003|gb|ELA32839.1| DNA mismatch repair protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 724
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 213/348 (61%), Gaps = 39/348 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P NALKEL+EN++DA +TS++V VK+GGLKLLQI DN
Sbjct: 23 PRRIRALDPNVVNKIAAGEIIVAPVNALKELIENAVDAGATSVEVLVKEGGLKLLQITDN 82
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI+K D++I+CER TTSK+T FEDL SI+T+GFRGEALASISH+AHL++ TKT S C
Sbjct: 83 GCGIQKGDLEILCERHTTSKITSFEDLTSIATYGFRGEALASISHIAHLSVTTKTSDSNC 142
Query: 124 AYRWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLV 170
A+R YL +A A + R QI ++ ++ +R+ E+ +
Sbjct: 143 AWR-AHYLDGKLAPAKPGQPADPKPTAGRQGTQISVEDLFFNVPTRRRAFRSPAEEYNKI 201
Query: 171 PLMKSQYQPSEKIVERAC------------LLEIASLNNL-------ELLSVEGTDDAFQ 211
+ +Y K V +C E+ + + EL+ + ++D +
Sbjct: 202 IDVVGRYAIHCKGVGFSCKKHGESGTSISLATEVDRIRQIYGSSVANELMEFDTSEDRWG 261
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K GW TN N+ KK T LLFIN+ IK+ +EQ+Y+ +LPKG PF+YLSL ++
Sbjct: 262 FKANGWATNANYHIKKTTLLLFINHRSVDSSNIKKALEQLYATFLPKGGRPFIYLSLEIN 321
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P VDVNVHPTK EVHFL+ED II+ + + L +TSR F TQS
Sbjct: 322 PSRVDVNVHPTKREVHFLNEDDIIQSICEHIRSKLAEVDTSRTFMTQS 369
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 144/199 (72%), Gaps = 12/199 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS++V VK+GGLKLLQI DNG GI+K D++I+CER TTSK+T FEDL SI+T+GFRGEA
Sbjct: 62 ATSVEVLVKEGGLKLLQITDNGCGIQKGDLEILCERHTTSKITSFEDLTSIATYGFRGEA 121
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHL++ TKT S CA+RA Y+D KL DP KP AG QGTQI EDL
Sbjct: 122 LASISHIAHLSVTTKTSDSNCAWRAHYLDGKLAPAKPGQPADP-KPTAGRQGTQISVEDL 180
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N+PTRR+A + P+EEYNKI DVV RYA+H VGF+ KK E+ I ++ +
Sbjct: 181 FFNVPTRRRAFRSPAEEYNKIIDVVGRYAIHCKGVGFSCKKHGESGTSISL---ATEVDR 237
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG++++ + F ++
Sbjct: 238 IRQIYGSSVANELMEFDTS 256
>gi|367045558|ref|XP_003653159.1| hypothetical protein THITE_2128823 [Thielavia terrestris NRRL 8126]
gi|347000421|gb|AEO66823.1| hypothetical protein THITE_2128823 [Thielavia terrestris NRRL 8126]
Length = 745
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/352 (46%), Positives = 213/352 (60%), Gaps = 44/352 (12%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD+ VVN+IAAGE+I P +ALKEL+EN++DA STS++V VK GGLKLLQI DN
Sbjct: 19 PRRIKALDQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLVKDGGLKLLQITDN 78
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KED+ ++CERFTTSKL +FEDL +IST+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 79 GCGIDKEDLPVLCERFTTSKLEKFEDLQTISTYGFRGEALASISHIAHLTVTTKTADSDC 138
Query: 124 AYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKE-------EKQWYRTV--EHTLV 170
A+R Y + A S R QI ++ ++ +R+V E+ +
Sbjct: 139 AWR-AYYDGGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNVPTRRRAFRSVSDEYNKI 197
Query: 171 PLMKSQY---------------QPSEKIVERA---CLLEI-----ASLNNLELLSVEGTD 207
M +Y + S I +A CL I +S+ N EL +D
Sbjct: 198 IDMVGRYAIHCSGVAFSCKKHGESSTSIAVQAGASCLDRIRQIYGSSVAN-ELTEFSTSD 256
Query: 208 DAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLS 261
D + K G TN N+STKK T LLFIN+ I++ IEQ YS +LPK PFVYLS
Sbjct: 257 DRWGFKAKGLATNANYSTKKTTILLFINHRCVESSNIRKAIEQTYSAFLPKNGHPFVYLS 316
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
L +DP+ VDVNVHPTK EV+FL+ED II+ + + L + SR F TQS
Sbjct: 317 LEIDPRRVDVNVHPTKREVNFLNEDEIIQAICEHIRSKLAAVDASRTFLTQS 368
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 140/199 (70%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V VK GGLKLLQI DNG GI KED+ ++CERFTTSKL +FEDL +IST+GFRGEA
Sbjct: 58 STSLEVLVKDGGLKLLQITDNGCGIDKEDLPVLCERFTTSKLEKFEDLQTISTYGFRGEA 117
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 118 LASISHIAHLTVTTKTADSDCAWRAYYDGGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 176
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + S+EYNKI D+V RYA+H V F+ KK E+ I +S +
Sbjct: 177 FYNVPTRRRAFRSVSDEYNKIIDMVGRYAIHCSGVAFSCKKHGESSTSIAVQAGASCLDR 236
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG++++ + FS++
Sbjct: 237 IRQIYGSSVANELTEFSTS 255
>gi|346977183|gb|EGY20635.1| DNA mismatch repair protein hexB [Verticillium dahliae VdLs.17]
Length = 704
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 213/354 (60%), Gaps = 42/354 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +P + L VVN+IAAGE+I P +ALKEL+EN++DA STS++V VK+GGLKLLQI
Sbjct: 1 MAEPMDVDALSPKVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLVKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG+GI+K+D+ I+CER TTSK+T FEDL SI+T+GFRGEALASISH+AHL++ TKTK
Sbjct: 61 TDNGSGIQKDDLPILCERHTTSKITSFEDLTSIATYGFRGEALASISHIAHLSVTTKTKD 120
Query: 121 SPCAYRWCTYLADLMALAL---MEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHT 168
S A+R +L+ E + RD QI ++ ++ +R+ E+
Sbjct: 121 SAVAWRAHFLDGNLVPAKPGQSAEPKKVAGRDGTQISVEDLFFNIPTRRRAFRSPSEEYN 180
Query: 169 LVPLMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEG 205
+ M +Y Q S +R + +S+ N EL+
Sbjct: 181 KIIDMVGRYAIHCQGVAFSCKKQGESGTSVSVQASASTTDRVRQIYGSSVGN-ELIEFAT 239
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+DD + K G +TN N+ KK TFLLFIN+ I++ IEQVY+ +LPK PF+Y
Sbjct: 240 SDDRWAFKADGLVTNANYHIKKTTFLLFINHRCVESTTIRKAIEQVYATFLPKNGRPFIY 299
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL +DP VDVNVHPTK EVHFL+ED II+ V + L +TSR F TQ+
Sbjct: 300 LSLEIDPARVDVNVHPTKREVHFLNEDEIIQVVCEQIRTKLADVDTSRTFMTQT 353
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 144/199 (72%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V VK+GGLKLLQI DNG+GI+K+D+ I+CER TTSK+T FEDL SI+T+GFRGEA
Sbjct: 43 STSLEVLVKEGGLKLLQITDNGSGIQKDDLPILCERHTTSKITSFEDLTSIATYGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S A+RA ++D L P KP AG GTQI EDL
Sbjct: 103 LASISHIAHLSVTTKTKDSAVAWRAHFLDGNLV-PAKPGQSAEPKKVAGRDGTQISVEDL 161
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+NIPTRR+A + PSEEYNKI D+V RYA+H V F+ KKQ E+ + ++S ++
Sbjct: 162 FFNIPTRRRAFRSPSEEYNKIIDMVGRYAIHCQGVAFSCKKQGESGTSVSVQASASTTDR 221
Query: 485 IGNIYGNNISRRVRRFSSA 503
+ IYG+++ + F+++
Sbjct: 222 VRQIYGSSVGNELIEFATS 240
>gi|299471543|emb|CBN80029.1| MutL protein homolog 1 [Ectocarpus siliculosus]
Length = 1123
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 209/369 (56%), Gaps = 60/369 (16%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI KLDE VVNRIAAGEV+QRPANA+KEL+ENSLDA STSI VT KQGGLKLLQIQD
Sbjct: 7 EPRKILKLDEDVVNRIAAGEVVQRPANAVKELMENSLDAGSTSITVTAKQGGLKLLQIQD 66
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GIR+ED+ IVCERFTTSKL +F DL ++STFGFRGEALASI+H A +TI +KT +S
Sbjct: 67 NGHGIRREDLPIVCERFTTSKLREFGDLRTMSTFGFRGEALASITHTAKVTITSKTPSSQ 126
Query: 123 CAYRWCTY------------------LADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
AY+ Y A + ++ + D + K + Y+
Sbjct: 127 VAYK-AKYSDGRLVAGGPGQSADPKPCAGVTGTTILAEDLFYNMDTRRRAFKSPGEQYKG 185
Query: 165 V------------EHTLVPLMKSQYQPSEKI---VERACLLEI----ASLNNLELLSVE- 204
+ + + K QPS + +CL I + EL+ +E
Sbjct: 186 ILDVVTRYAVHFGDRGVSFTCKKHGQPSPDLHTPPRSSCLANIRVAFGPALSRELVELEC 245
Query: 205 ---------GTDDA------FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIE 243
G D F K G ++ ++S K+ F+LFIN+ IK+ +E
Sbjct: 246 SQAEELLDQGADGGEVAPSKFAFKAKGLVSGADYSAKRSDFILFINDRLVESPSIKKTVE 305
Query: 244 QVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
Y LPK + PFVYL + M ++DVNVHPTK EVHFLH++ ++E ++ +E+ L G+
Sbjct: 306 SAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGA 365
Query: 304 NTSRVFYTQ 312
N SR FY+Q
Sbjct: 366 NQSRTFYSQ 374
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 134/195 (68%), Gaps = 11/195 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI VT KQGGLKLLQIQDNG GIR+ED+ IVCERFTTSKL +F DL ++STFGFRGEA
Sbjct: 47 STSITVTAKQGGLKLLQIQDNGHGIRREDLPIVCERFTTSKLREFGDLRTMSTFGFRGEA 106
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASI+H A +TI +KT +S AY+A Y D +L DP KPCAG GT I+AEDL
Sbjct: 107 LASITHTAKVTITSKTPSSQVAYKAKYSDGRLVAGGPGQSADP-KPCAGVTGTTILAEDL 165
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSHS 482
FYN+ TRR+A K P E+Y I DVV+RYAVH + V FT KK + D+ T SS
Sbjct: 166 FYNMDTRRRAFKSPGEQYKGILDVVTRYAVHFGDRGVSFTCKKHGQPSPDLHTPPRSSCL 225
Query: 483 EVIGNIYGNNISRRV 497
I +G +SR +
Sbjct: 226 ANIRVAFGPALSREL 240
>gi|388579155|gb|EIM19483.1| DNA mismatch repair protein MutL [Wallemia sebi CBS 633.66]
Length = 678
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 215/359 (59%), Gaps = 69/359 (19%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KLDE VVN IAAGE+I RPANA+KE+LENSLDA +T+I++T+K GGLKLLQIQDNG
Sbjct: 5 RIRKLDELVVNTIAAGEIIHRPANAIKEMLENSLDAGATNIKITIKDGGLKLLQIQDNGG 64
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+CERFTTSK+ +FEDL ++STFGFRGEALASISHVAHL+I+TK +
Sbjct: 65 GISKEDLPILCERFTTSKIRKFEDLQTVSTFGFRGEALASISHVAHLSILTKKVEDNAGW 124
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKE----EKQWYRTVEHTL--VPL----MKS 175
+ + Y D +QIG+ + K +VE VP+ +KS
Sbjct: 125 K----------------ANY--SDGKQIGEAKPTAGNKGTIISVEDLFFNVPMRRRALKS 166
Query: 176 QYQPSEKIVE-------------------RACLLEIASLN----------------NLEL 200
+ KIV+ A + EI++L+ + EL
Sbjct: 167 ANEEYNKIVDVVTKYAVHNPTVSFVCKKVNANVPEISTLSRSTTVMNIKALFGQQVSKEL 226
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
L E D K +G+ T+ N+++K+ T LLFIN+ P+K+ +E YS LPKGS
Sbjct: 227 LRFESEDQELDYKCSGYATSTNYASKRTTMLLFINHRLVDCPPLKKSLENAYSALLPKGS 286
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVY+ L + P+N+DVNVHPTK +VHF++ED IIE + L L SNTS+ + Q+
Sbjct: 287 HPFVYVDLEIPPQNIDVNVHPTKSQVHFINEDEIIEHLVDALSIKLSSSNTSKSYDVQT 345
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 148/214 (69%), Gaps = 9/214 (4%)
Query: 292 VQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTT 351
++ MLE +L +T+I++T+K GGLKLLQIQDNG GI KED+ I+CERFTT
Sbjct: 30 IKEMLENSLDAG---------ATNIKITIKDGGLKLLQIQDNGGGISKEDLPILCERFTT 80
Query: 352 SKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPC 411
SK+ +FEDL ++STFGFRGEALASISHVAHL+I+TK ++A+Y D K KP
Sbjct: 81 SKIRKFEDLQTVSTFGFRGEALASISHVAHLSILTKKVEDNAGWKANYSDGKQIGEAKPT 140
Query: 412 AGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLA 471
AGN+GT I EDLF+N+P RR+ALK +EEYNKI DVV++YAVHNP V F KK N N+
Sbjct: 141 AGNKGTIISVEDLFFNVPMRRRALKSANEEYNKIVDVVTKYAVHNPTVSFVCKKVNANVP 200
Query: 472 DIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+I T S+ I ++G +S+ + RF S Q
Sbjct: 201 EISTLSRSTTVMNIKALFGQQVSKELLRFESEDQ 234
>gi|89269512|emb|CAJ83360.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
[Xenopus (Silurana) tropicalis]
Length = 205
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/164 (75%), Positives = 141/164 (85%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQVTVK GG+KL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL++IST+GFRGE
Sbjct: 40 KSTSIQVTVKDGGMKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 100 ALASISHVAHVTITTKTADGKCAYRASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
RKALK PSEE+ +I +VVSRYA+HN + F++KKQ E +AD+RT
Sbjct: 160 RKALKSPSEEHARIVEVVSRYAIHNSGISFSVKKQGETMADVRT 203
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/120 (81%), Positives = 111/120 (92%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L+ETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQVTVK GG+KL+QIQDNGTG
Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL++IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASISHVAHVTITTKTADGKCAYR 124
>gi|330802334|ref|XP_003289173.1| hypothetical protein DICPUDRAFT_55923 [Dictyostelium purpureum]
gi|325080749|gb|EGC34291.1| hypothetical protein DICPUDRAFT_55923 [Dictyostelium purpureum]
Length = 805
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 218/349 (62%), Gaps = 42/349 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L VVN+I+AGEVIQRP+NALKELLENSLDAKST+I +TVK GG+KLLQIQDNGT
Sbjct: 37 KIHRLSPEVVNKISAGEVIQRPSNALKELLENSLDAKSTNIIITVKDGGMKLLQIQDNGT 96
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GIR +DM+IVCERFTTSKLT+FEDL I++FGFRGEAL+SISHV+HL I TKT S CAY
Sbjct: 97 GIRLDDMEIVCERFTTSKLTKFEDLRKIASFGFRGEALSSISHVSHLKIQTKTADSNCAY 156
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKE---EKQWYRTV-----------EHTLVP 171
R C + L + S + + + E ++ T EH+ +
Sbjct: 157 RACYFNGKLSPSNPNDPSSCDPKPCAGVNGTQITVEDLFFNTPSRKSVLKNFSEEHSRIS 216
Query: 172 LMKSQY---------------QPSEKIVERACLLE---IASL--NNL--ELLSVEGTDDA 209
+ +Y +P+ +++ L E I+SL N+L +L + D
Sbjct: 217 QLIKKYAINNPKVGFTLKKLGEPTPEVITSGNLTEQDVISSLFGNDLAKDLKEITLKSDK 276
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
F+ V ITN N+++KK F+LF+N +K +EQ+YS YLPKG+ PF++L L
Sbjct: 277 FEFDVKALITNTNYNSKKTNFILFVNGRLVDSKNLKVGLEQIYSKYLPKGTHPFMFLRLL 336
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PKN+DVN+HPTK EV LHED IIE +Q +++ L S+ S+ F TQ
Sbjct: 337 VAPKNIDVNIHPTKSEVKILHEDQIIEIIQQKIDEELSVSSNSKTFSTQ 385
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 167/247 (67%), Gaps = 24/247 (9%)
Query: 276 TKHEVHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKL 327
TK ++H L + + I+R + L++ L S +ST+I +TVK GG+KL
Sbjct: 34 TKKKIHRLSPEVVNKISAGEVIQRPSNALKELLENS-----LDAKSTNIIITVKDGGMKL 88
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
LQIQDNGTGIR +DM+IVCERFTTSKLT+FEDL I++FGFRGEAL+SISHV+HL I TK
Sbjct: 89 LQIQDNGTGIRLDDMEIVCERFTTSKLTKFEDLRKIASFGFRGEALSSISHVSHLKIQTK 148
Query: 388 TKTSPCAYRASYIDSKLK----------DPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQ 437
T S CAYRA Y + KL DP KPCAG GTQI EDLF+N P+R+ LK
Sbjct: 149 TADSNCAYRACYFNGKLSPSNPNDPSSCDP-KPCAGVNGTQITVEDLFFNTPSRKSVLKN 207
Query: 438 PSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
SEE+++I+ ++ +YA++NP VGFTLKK E ++ T+ N + +VI +++GN++++ +
Sbjct: 208 FSEEHSRISQLIKKYAINNPKVGFTLKKLGEPTPEVITSGNLTEQDVISSLFGNDLAKDL 267
Query: 498 RRFSSAS 504
+ + S
Sbjct: 268 KEITLKS 274
>gi|367022410|ref|XP_003660490.1| hypothetical protein MYCTH_2086451 [Myceliophthora thermophila ATCC
42464]
gi|347007757|gb|AEO55245.1| hypothetical protein MYCTH_2086451 [Myceliophthora thermophila ATCC
42464]
Length = 751
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 208/357 (58%), Gaps = 54/357 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD+ VVN+IAAGE+I P +ALKEL+EN++DA STSI+V VK GGLKLLQI DN
Sbjct: 26 PRRIKALDQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GI KED+ I+CERFTTSKL +FEDL +I+T+GFRGEALASISH+AHLT+ TKT+ S
Sbjct: 86 GSGIDKEDLPILCERFTTSKLQKFEDLQTIATYGFRGEALASISHIAHLTVTTKTRESN- 144
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQ-PS 180
C + A L+ D + + ++ Q TVE VP + ++ PS
Sbjct: 145 ----CAWRAYYDGGKLVPAKPGQSPDPKPVAGRQGTQV--TVEDLFYNVPTRRRAFRSPS 198
Query: 181 E---KIVERACLLEIASLN-----------------------------------NLELLS 202
+ KI++ + N EL
Sbjct: 199 DEYNKIIDMVGRYAVHCSNVAFSCKKHGESSTSIAVQASTSCHDRIRQIYGGGIASELTE 258
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFP 256
+ +DD + K G TN N+STKK T LLFIN+ I++ IEQ YS +LPKG P
Sbjct: 259 LSTSDDRWAFKAKGLATNANYSTKKTTILLFINHRCVESSNIRKAIEQTYSAFLPKGGHP 318
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
FVYLSL +DP+ VDVNVHPTK EV+FL+ED II+ + + L + SR F TQ+
Sbjct: 319 FVYLSLEIDPRRVDVNVHPTKREVNFLNEDEIIQAICEHIRAKLAAVDASRTFVTQT 375
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 142/199 (71%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG+GI KED+ I+CERFTTSKL +FEDL +I+T+GFRGEA
Sbjct: 65 STSIEVLVKDGGLKLLQITDNGSGIDKEDLPILCERFTTSKLQKFEDLQTIATYGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQ+ EDL
Sbjct: 125 LASISHIAHLTVTTKTRESNCAWRAYYDGGKLVPAKPGQSPDP-KPVAGRQGTQVTVEDL 183
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + PS+EYNKI D+V RYAVH +V F+ KK E+ I ++S +
Sbjct: 184 FYNVPTRRRAFRSPSDEYNKIIDMVGRYAVHCSNVAFSCKKHGESSTSIAVQASTSCHDR 243
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG I+ + S++
Sbjct: 244 IRQIYGGGIASELTELSTS 262
>gi|449493295|ref|XP_002197386.2| PREDICTED: DNA mismatch repair protein Mlh1 [Taeniopygia guttata]
Length = 760
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLK +Q+QDNG GIRKED+DIVCERFTTSKL +FEDL SIST+GFRGE
Sbjct: 51 KSTSIQVVVKEGGLKFIQVQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGE 110
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+T+ TKT + CA+RA+Y D K+K P KPCAGNQGTQI EDLFYN+ TR
Sbjct: 111 ALASISHVAHVTVTTKTADAKCAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTR 170
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK P+EEY KI +VVSRYA+HN + F++KKQ + ++D+RT N+S + I I+GN
Sbjct: 171 RKALKNPNEEYAKILEVVSRYAIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGN 230
Query: 492 NISRRV 497
+SR +
Sbjct: 231 AVSREL 236
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/311 (46%), Positives = 192/311 (61%), Gaps = 39/311 (12%)
Query: 39 LDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGF 98
LDAKSTSIQV VK+GGLK +Q+QDNG GIRKED+DIVCERFTTSKL +FEDL SIST+GF
Sbjct: 48 LDAKSTSIQVVVKEGGLKFIQVQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGF 107
Query: 99 RGEALASISHVAHLTIIT------------------KTKTSPCAYRWCTYLA--DLMALA 138
RGEALASISHVAH+T+ T K PCA T + DL
Sbjct: 108 RGEALASISHVAHVTVTTKTADAKCAFRATYSDGKIKAPPKPCAGNQGTQITVEDLF-YN 166
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+ + L+ E+ E + ++ + S + + + + L ++++N+
Sbjct: 167 VNTRRKALKNPNEEYAKILEVVSRYAIHNSGISF--SVKKQGDTVSDVRTLSNASTVDNI 224
Query: 199 ----------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMI 242
EL+ V D K+ G+ITN N+S KK FLLFIN+ +++ I
Sbjct: 225 RAIFGNAVSRELIEVGCEDANLAFKMKGYITNANYSVKKCIFLLFINHRLVESAALRKAI 284
Query: 243 EQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
E VY+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHED+I+ERVQ +E LLG
Sbjct: 285 ETVYAAYLPKSTHPFLYLSLEIAPQNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLG 344
Query: 303 SNTSRVFYTQS 313
SN+SR+++TQ+
Sbjct: 345 SNSSRMYFTQT 355
>gi|328877002|gb|EGG25365.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum]
Length = 1199
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 212/346 (61%), Gaps = 42/346 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KL V+NRI+AGEVIQRP+NALKEL+ENSLDA+ST I+VTVK GGLKLLQIQDNG+
Sbjct: 65 KIQKLSIDVINRISAGEVIQRPSNALKELIENSLDAQSTVIKVTVKDGGLKLLQIQDNGS 124
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA- 124
GI+K+D+DIVCERFTTSKL +FEDL I TFGFRGEAL+SISHV+HL I+TKT S CA
Sbjct: 125 GIKKDDLDIVCERFTTSKLQKFEDLRKIETFGFRGEALSSISHVSHLKILTKTADSNCAY 184
Query: 125 --YRWCTYLADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPLM 173
Y LA A ++ + QI ++ K+ R + EH V +
Sbjct: 185 RAYYADGKLAPSTAGDTIDPKPCAGVNGTQITSEDLFFNVPARKKVLRNILEEHARVVDL 244
Query: 174 KSQY-----------------------QPSEKIVERACL-LEIASLNNLELLSVEGTDDA 209
+Y Q E E+ + L S EL + ++D
Sbjct: 245 VRKYAIFNSKVSFILKKADISTPDVFTQGGEGTTEKEVISLIYGSEIAKELKELSSSNDK 304
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ K+TG + N S+KK F+LFINN +K +EQ+Y+ YL KG++PF+++ L
Sbjct: 305 LEYKMTGLFSTTNLSSKKPIFILFINNRLVDCRNLKLGLEQLYTKYLSKGAYPFIFVRLS 364
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
++P+NVDVN+HPTK EV FL+ED IIE +Q +++ L S S+ F
Sbjct: 365 LNPRNVDVNIHPTKSEVRFLYEDQIIELIQKVVDTELNLSILSKTF 410
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 146/203 (71%), Gaps = 11/203 (5%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
QST I+VTVK GGLKLLQIQDNG+GI+K+D+DIVCERFTTSKL +FEDL I TFGFRGE
Sbjct: 101 QSTVIKVTVKDGGLKLLQIQDNGSGIKKDDLDIVCERFTTSKLQKFEDLRKIETFGFRGE 160
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLK--------DPIKPCAGNQGTQIIAED 423
AL+SISHV+HL I+TKT S CAYRA Y D KL DP KPCAG GTQI +ED
Sbjct: 161 ALSSISHVSHLKILTKTADSNCAYRAYYADGKLAPSTAGDTIDP-KPCAGVNGTQITSED 219
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT--NVNSSH 481
LF+N+P R+K L+ EE+ ++ D+V +YA+ N V F LKK + + D+ T ++
Sbjct: 220 LFFNVPARKKVLRNILEEHARVVDLVRKYAIFNSKVSFILKKADISTPDVFTQGGEGTTE 279
Query: 482 SEVIGNIYGNNISRRVRRFSSAS 504
EVI IYG+ I++ ++ SS++
Sbjct: 280 KEVISLIYGSEIAKELKELSSSN 302
>gi|345326074|ref|XP_003430998.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Mlh1-like [Ornithorhynchus anatinus]
Length = 725
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 149/186 (80%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+STSIQVTVK+GGLKL+QIQDNGTGIRK+D+ IVCERFTTSKL FEDL SIST+GFRG
Sbjct: 23 AKSTSIQVTVKEGGLKLIQIQDNGTGIRKDDLAIVCERFTTSKLQSFEDLASISTYGFRG 82
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+T+ TKT CAYRASY D KLK P +PCAGNQGT I EDLFYN+ T
Sbjct: 83 EALASISHVAHVTVTTKTADGKCAYRASYSDGKLKSPPRPCAGNQGTLITVEDLFYNVGT 142
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI DVV RY+VHN + F ++KQ E ADIRT +++ + I +++G
Sbjct: 143 RRKALKNPSEEYGKILDVVGRYSVHNSGISFLVRKQGETAADIRTLPDATTVDNIRSVFG 202
Query: 491 NNISRR 496
+SRR
Sbjct: 203 CVVSRR 208
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 83/101 (82%), Gaps = 6/101 (5%)
Query: 26 RPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLT 85
RP L+ LDAKSTSIQVTVK+GGLKL+QIQDNGTGIRK+D+ IVCERFTTSKL
Sbjct: 14 RPPQELR------LDAKSTSIQVTVKEGGLKLIQIQDNGTGIRKDDLAIVCERFTTSKLQ 67
Query: 86 QFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
FEDL SIST+GFRGEALASISHVAH+T+ TKT CAYR
Sbjct: 68 SFEDLASISTYGFRGEALASISHVAHVTVTTKTADGKCAYR 108
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQ 293
+KR IE VY YLPK + PF+YLSL + P+NVDVNVHPTKHEVH L ED+I+ERVQ
Sbjct: 269 LKRAIENVYVAYLPKNTHPFLYLSLEIAPQNVDVNVHPTKHEVHXLPEDSILERVQ 324
>gi|315052862|ref|XP_003175805.1| DNA mismatch repair protein mutL [Arthroderma gypseum CBS 118893]
gi|311341120|gb|EFR00323.1| DNA mismatch repair protein mutL [Arthroderma gypseum CBS 118893]
Length = 801
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 208/359 (57%), Gaps = 56/359 (15%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI D
Sbjct: 39 RPRKIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITD 98
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S
Sbjct: 99 NGHGIDNDDLPILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSS 158
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPS 180
C + A L+ + I ++ Q TVE VP + ++ +
Sbjct: 159 -----CAWRAHYSDGKLVPAKPGQSASPKPIAGRKGTQI--TVEDLFYNVPTRRRAFRSA 211
Query: 181 EK----------------------------------------IVERACLLEIASLNNLEL 200
+ IV+R L ++ N EL
Sbjct: 212 SEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRIRQLHGGAVAN-EL 270
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+S+E D + + + W+TN N+ KK T L+FIN+ IKR +EQ YS +LPKG
Sbjct: 271 VSLEVDDKRWGCRTSAWVTNANYHAKKTTLLIFINHRSVESTAIKRAVEQTYSTFLPKGG 330
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYL L ++P+ +DVNVHPTK EV+FL+ED IIE + S + L ++SR F TQ+
Sbjct: 331 HPFVYLDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLAAVDSSRTFMTQT 389
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 7/189 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 79 STSVEILVREGGLKLLQITDNGHGIDNDDLPILCERFTTSKLQAFEDLSSIATYGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISHVAHLT+ TKT S CA+RA Y D KL KP AG +GTQI EDLF
Sbjct: 139 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQSASPKPIAGRKGTQITVEDLF 198
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI D+V RYAVH F+ KK E + T++NSS + I
Sbjct: 199 YNVPTRRRAFRSASEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRI 258
Query: 486 GNIYGNNIS 494
++G ++
Sbjct: 259 RQLHGGAVA 267
>gi|320583166|gb|EFW97382.1| hypothetical protein HPODL_1160 [Ogataea parapolymorpha DL-1]
Length = 652
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 208/348 (59%), Gaps = 41/348 (11%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I+ L+E VVNRIAAGE++ P +ALKELLENS+DA++TSI V K+GGLKLLQI DNG
Sbjct: 4 PRIRPLEEAVVNRIAAGEIVLAPYSALKELLENSIDAQATSIDVACKEGGLKLLQITDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ IVCERFTTSKL +FEDL I+T+GFRGEALASISH+AH++++TKT+ SPCA
Sbjct: 64 VGIAKDDLAIVCERFTTSKLRKFEDLQHIATYGFRGEALASISHIAHVSLVTKTRDSPCA 123
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL---------VPLMKS 175
++ C Y A + E D + ++ + + H+L + + S
Sbjct: 124 WK-CRYDAGRLDARTPEPQPVAGTDGTTLVVEDLFYNFPSRLHSLRSPAEEYAKIVDIVS 182
Query: 176 QYQPSEKIVERACLLEIASLNNLELLS----------VEGTDDAFQL------------- 212
+Y V C + N++ L S + G+ A QL
Sbjct: 183 KYAIHATHVGFTCKKYGTAANDIALRSGMSQKERVRAIYGSAVASQLLELEVEPHTDYGL 242
Query: 213 -KVTGWITNVNFSTKKMT-FLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K TG ITNVN+ KK T + FIN +P++R I Q YS +LPKG PFVYLSL +
Sbjct: 243 LKCTGLITNVNYDNKKSTPPIFFINGRLVSCDPLRRAIAQTYSTFLPKGHKPFVYLSLEL 302
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
D NVDVNVHPTK EV FL ED I++ V + + L ++ SR F TQ
Sbjct: 303 DSVNVDVNVHPTKREVRFLFEDEIVDHVAQKIAEVLANTDVSRTFLTQ 350
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 5/190 (2%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
Q+TSI V K+GGLKLLQI DNG GI K+D+ IVCERFTTSKL +FEDL I+T+GFRGE
Sbjct: 41 QATSIDVACKEGGLKLLQITDNGVGIAKDDLAIVCERFTTSKLRKFEDLQHIATYGFRGE 100
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASY----IDSKLKDPIKPCAGNQGTQIIAEDLFYN 427
ALASISH+AH++++TKT+ SPCA++ Y +D++ +P +P AG GT ++ EDLFYN
Sbjct: 101 ALASISHIAHVSLVTKTRDSPCAWKCRYDAGRLDARTPEP-QPVAGTDGTTLVVEDLFYN 159
Query: 428 IPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGN 487
P+R +L+ P+EEY KI D+VS+YA+H HVGFT KK DI S E +
Sbjct: 160 FPSRLHSLRSPAEEYAKIVDIVSKYAIHATHVGFTCKKYGTAANDIALRSGMSQKERVRA 219
Query: 488 IYGNNISRRV 497
IYG+ ++ ++
Sbjct: 220 IYGSAVASQL 229
>gi|358393787|gb|EHK43188.1| hypothetical protein TRIATDRAFT_136747 [Trichoderma atroviride IMI
206040]
Length = 735
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 208/349 (59%), Gaps = 42/349 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLK+LQI DNG
Sbjct: 29 RIRALDPDVVNKIAAGEIIVAPVHALKELVENAVDAGSTSLEILVKDGGLKMLQITDNGG 88
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED++I+C R TTSK++ FEDL+SI+T+GFRGEALASISH+AHLT+ TKTK SP A+
Sbjct: 89 GIEKEDLEILCVRHTTSKISTFEDLSSIATYGFRGEALASISHIAHLTVTTKTKDSPLAW 148
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPL 172
R YL + A E R QI ++ ++ +R+ E +
Sbjct: 149 R-AHYLDGKLVPAKPGQSAEPKGAAGRQGTQITVEDLFFNVPTRRRAFRSYADEFNKIID 207
Query: 173 MKSQYQPSEKIVERACLLEIASLNNL----------------------ELLSVEGTDDAF 210
M +Y K V C + N L EL+ + +DD +
Sbjct: 208 MAGRYAIHCKGVGFTCKKAGEASNALSVQVQATVIDRIRQIHGSNVANELIELSVSDDRW 267
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
G++TN N+ KK T LLFIN+ +K+ +EQ YS +LPKG PF+YLSL +
Sbjct: 268 GFSANGYVTNANYHIKKTTLLLFINHRSVESTTMKKALEQTYSAFLPKGGHPFIYLSLEI 327
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DP VDVNVHPTK EVHFL+E+ +I+ + +E L +TSR F TQ+
Sbjct: 328 DPARVDVNVHPTKREVHFLNEEEVIQAICQKIESELATVDTSRTFMTQT 376
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLK+LQI DNG GI KED++I+C R TTSK++ FEDL+SI+T+GFRGEA
Sbjct: 66 STSLEILVKDGGLKMLQITDNGGGIEKEDLEILCVRHTTSKISTFEDLSSIATYGFRGEA 125
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK SP A+RA Y+D KL P KP AG QGTQI EDL
Sbjct: 126 LASISHIAHLTVTTKTKDSPLAWRAHYLDGKLV-PAKPGQSAEPKGAAGRQGTQITVEDL 184
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N+PTRR+A + ++E+NKI D+ RYA+H VGFT KK E + V ++ +
Sbjct: 185 FFNVPTRRRAFRSYADEFNKIIDMAGRYAIHCKGVGFTCKKAGEASNALSVQVQATVIDR 244
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+N++ + S
Sbjct: 245 IRQIHGSNVANELIELS 261
>gi|383866384|ref|XP_003708650.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Megachile
rotundata]
Length = 869
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 150/186 (80%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+IQ+ VK+GGLKLLQIQDNGTGIR+EDMDIVCERFTTSKL FEDL SISTFGFRGE
Sbjct: 42 KATNIQIIVKEGGLKLLQIQDNGTGIRREDMDIVCERFTTSKLQTFEDLRSISTFGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH++ LTI TKT CAY+ASYIDSKLK KPCAGNQGT I+ E+LFYN+ TR
Sbjct: 102 ALASISHISLLTITTKTADEKCAYKASYIDSKLKGQPKPCAGNQGTTIMIENLFYNVATR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKAL P++E+NKI DVV++YA+HNP+VGF LKK E IRT NS+ + +YGN
Sbjct: 162 RKALSNPTDEFNKIIDVVTKYAIHNPNVGFLLKKHGEITPQIRTLHNSTKMNNVRILYGN 221
Query: 492 NISRRV 497
+SR +
Sbjct: 222 PVSREL 227
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 112/126 (88%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KIKKL+E VVNRIAAGEVIQRPANALKEL+ENSLDAK+T+IQ+ VK+GGLKLLQI
Sbjct: 1 MTAPGKIKKLNEVVVNRIAAGEVIQRPANALKELIENSLDAKATNIQIIVKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIR+EDMDIVCERFTTSKL FEDL SISTFGFRGEALASISH++ LTI TKT
Sbjct: 61 QDNGTGIRREDMDIVCERFTTSKLQTFEDLRSISTFGFRGEALASISHISLLTITTKTAD 120
Query: 121 SPCAYR 126
CAY+
Sbjct: 121 EKCAYK 126
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 87/121 (71%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL VE D ++ K+ ITN N++ KKM FLLFIN+ I++M+E+VY+ YLPK
Sbjct: 226 ELLEVELEDKDYKFKMHALITNPNYTNKKMVFLLFINDRLVESSSIRKMLEEVYTFYLPK 285
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ P+ Y+SL ++P+NVDVNVHPTKHEV FLHED IIE+++ L+ L G++ SR FY Q
Sbjct: 286 KTHPWCYVSLKIEPQNVDVNVHPTKHEVKFLHEDAIIEKIRLSLDDRLSGNSASRTFYVQ 345
Query: 313 S 313
+
Sbjct: 346 A 346
>gi|342879426|gb|EGU80674.1| hypothetical protein FOXB_08815 [Fusarium oxysporum Fo5176]
Length = 743
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 210/354 (59%), Gaps = 44/354 (12%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
D P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA +TS+ V K GGLKLLQI
Sbjct: 44 DAPRRIRALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVLAKDGGLKLLQIT 103
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG GI+KED+ I+CER TTSK+T FEDL +I+T+GFRGEALASISH+AHL++ TKTK S
Sbjct: 104 DNGCGIQKEDLAILCERHTTSKITSFEDLAAIATYGFRGEALASISHIAHLSVTTKTKDS 163
Query: 122 PCAYRWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHT 168
A+R Y+ +A A E R QI ++ ++ +R+ E
Sbjct: 164 DLAWR-AHYIDGKLAPAKPGQSAEPKGVAGRPGTQITVEDLFYNIPTRRRAFRSPADEFN 222
Query: 169 LVPLMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEG 205
+ M +Y Q +++R + +++ N ELL
Sbjct: 223 KIIDMVGRYAVHCKGVGFTCKKAGEASTNLSIQAQATVIDRIRQIHGSAVAN-ELLEFSV 281
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+D + K G+ TN N+S KK T LLFIN+ IK+ IEQ Y+ +LPK PF+Y
Sbjct: 282 AEDRWGFKAEGFTTNANYSVKKTTLLLFINHRCVESTHIKKAIEQTYANFLPKNGHPFIY 341
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL ++P VDVNVHPTK EVHFL+ED II+ + +E L +TSR F TQ+
Sbjct: 342 LSLEIEPARVDVNVHPTKREVHFLNEDEIIQSICEHIESKLAAVDTSRTFMTQT 395
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 138/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+ V K GGLKLLQI DNG GI+KED+ I+CER TTSK+T FEDL +I+T+GFRGEA
Sbjct: 85 ATSLDVLAKDGGLKLLQITDNGCGIQKEDLAILCERHTTSKITSFEDLAAIATYGFRGEA 144
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S A+RA YID KL P KP AG GTQI EDL
Sbjct: 145 LASISHIAHLSVTTKTKDSDLAWRAHYIDGKLA-PAKPGQSAEPKGVAGRPGTQITVEDL 203
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + P++E+NKI D+V RYAVH VGFT KK E ++ ++ +
Sbjct: 204 FYNIPTRRRAFRSPADEFNKIIDMVGRYAVHCKGVGFTCKKAGEASTNLSIQAQATVIDR 263
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G+ ++ + FS A
Sbjct: 264 IRQIHGSAVANELLEFSVA 282
>gi|322706768|gb|EFY98348.1| MutL-like protein [Metarhizium anisopliae ARSEF 23]
Length = 722
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 202/349 (57%), Gaps = 42/349 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD VVN+IAAGE+I P +ALKEL+EN++DA ST++++ VK GGLKLLQI DNG
Sbjct: 28 RIKALDPDVVNKIAAGEIIVAPVHALKELVENAVDAGSTALEILVKDGGLKLLQITDNGC 87
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+CER TTSK+T FEDL+SI T+GFRGEALASISH+AHL++ TKTK SP A+
Sbjct: 88 GIEKEDLAILCERHTTSKITAFEDLSSIGTYGFRGEALASISHIAHLSVTTKTKDSPLAW 147
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPL 172
R YL M E R QI ++ ++ +R+ E +
Sbjct: 148 R-AHYLDGKMVAPKPGQPAEPKGVAGRPGTQITVEDLFFSIPTRRRAFRSYSDEFNKIID 206
Query: 173 MKSQYQPSEKIVERACLLEIASLNNL----------------------ELLSVEGTDDAF 210
M +Y + V C S N L EL+ +D +
Sbjct: 207 MVGRYSIHCQGVGFTCKKAGESSNTLSIQSQATTLDRVRQIYGSSVANELVDFSASDARW 266
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K TN N+ KK TFLLFINN +K+ IEQ Y +LPKG PFVYLSL +
Sbjct: 267 GFKAQVLATNANYHIKKTTFLLFINNRSVESANVKKAIEQTYLNFLPKGGHPFVYLSLEI 326
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DP VDVNVHPTK EVHFL+ED I+ V + LE L +TSR F TQ+
Sbjct: 327 DPARVDVNVHPTKREVHFLNEDEILHAVCTELESRLANVDTSRTFKTQT 375
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 140/198 (70%), Gaps = 7/198 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++++ VK GGLKLLQI DNG GI KED+ I+CER TTSK+T FEDL+SI T+GFRGEA
Sbjct: 65 STALEILVKDGGLKLLQITDNGCGIEKEDLAILCERHTTSKITAFEDLSSIGTYGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL++ TKTK SP A+RA Y+D K+ P K AG GTQI EDLF
Sbjct: 125 LASISHIAHLSVTTKTKDSPLAWRAHYLDGKMVAPKPGQPAEPKGVAGRPGTQITVEDLF 184
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
++IPTRR+A + S+E+NKI D+V RY++H VGFT KK E+ + ++ + +
Sbjct: 185 FSIPTRRRAFRSYSDEFNKIIDMVGRYSIHCQGVGFTCKKAGESSNTLSIQSQATTLDRV 244
Query: 486 GNIYGNNISRRVRRFSSA 503
IYG++++ + FS++
Sbjct: 245 RQIYGSSVANELVDFSAS 262
>gi|46136425|ref|XP_389904.1| hypothetical protein FG09728.1 [Gibberella zeae PH-1]
Length = 737
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 209/351 (59%), Gaps = 42/351 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD VVN+IAAGE+I P +ALKEL+EN++DA +TS+ V K+GGLKLLQI DN
Sbjct: 40 PRRIKALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVLAKEGGLKLLQITDN 99
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI+K+D+ I+CER TTSK+T FEDL++I T+GFRGEALASISH+AHL++ TKTK S
Sbjct: 100 GCGIQKDDLAILCERHTTSKITTFEDLSAIETYGFRGEALASISHIAHLSVTTKTKDSDL 159
Query: 124 AYRWCTY---LADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVP 171
A+R Y LA E R QI ++ ++ +R+ E +
Sbjct: 160 AWRAHYYEGKLAPAKPGQSAEPKGVAGRQGTQITVEDLFFNIATRRRAFRSPSDEFNKII 219
Query: 172 LMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGTDD 208
M +Y Q +++R + +++ N ELL ++
Sbjct: 220 DMVGRYAVHCKGVGFTCKKAGEASTNLSIQAHATVIDRIRQIHGSAVAN-ELLEFSVSEA 278
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSL 262
+ + G+ TN N+S KK T LLFIN+ IK+ +EQ Y+ +LPK PF+YLSL
Sbjct: 279 RWGFRAEGYTTNANYSVKKTTILLFINHRCVESTHIKKAVEQTYANFLPKNGHPFIYLSL 338
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP VDVNVHPTK EVHFL+ED II+ + + +E L +TSR F TQ+
Sbjct: 339 EIDPARVDVNVHPTKREVHFLNEDEIIQSICAAIESKLAAVDTSRTFMTQT 389
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 138/197 (70%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+ V K+GGLKLLQI DNG GI+K+D+ I+CER TTSK+T FEDL++I T+GFRGEA
Sbjct: 79 ATSLDVLAKEGGLKLLQITDNGCGIQKDDLAILCERHTTSKITTFEDLSAIETYGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S A+RA Y + KL P KP AG QGTQI EDL
Sbjct: 139 LASISHIAHLSVTTKTKDSDLAWRAHYYEGKLA-PAKPGQSAEPKGVAGRQGTQITVEDL 197
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+NI TRR+A + PS+E+NKI D+V RYAVH VGFT KK E ++ +++ +
Sbjct: 198 FFNIATRRRAFRSPSDEFNKIIDMVGRYAVHCKGVGFTCKKAGEASTNLSIQAHATVIDR 257
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + FS
Sbjct: 258 IRQIHGSAVANELLEFS 274
>gi|321475167|gb|EFX86130.1| putative MLH1, MutL protein 1 [Daphnia pulex]
Length = 714
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L++ L S STSIQVTVK GGLKLL+IQDNG+GI KED IVCE
Sbjct: 27 IIQRPANALKEMLENS-----LDAGSTSIQVTVKDGGLKLLKIQDNGSGINKEDFAIVCE 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL +FEDLN+I TFGFRGEALASISHVAHLTIITKT CAY++SY + KL
Sbjct: 82 RFTTSKLQKFEDLNAIGTFGFRGEALASISHVAHLTIITKTVEMQCAYKSSYHNGKLVGA 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAG QGTQI+ EDLFYN+PTRR ALK PS+E+N+I +V++R+AVHN VGF+LKK N
Sbjct: 142 SKPCAGTQGTQIVVEDLFYNVPTRRNALKSPSDEHNRIIEVITRFAVHNASVGFSLKKLN 201
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
+N +D+RT+ NS+ + I +YG+ +++
Sbjct: 202 DNGSDVRTSPNSTQEDNIRILYGHAVAK 229
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/124 (82%), Positives = 110/124 (88%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I KLDETVVNRIAAGE+IQRPANALKE+LENSLDA STSIQVTVK GGLKLL+IQD
Sbjct: 7 KPKNILKLDETVVNRIAAGEIIQRPANALKEMLENSLDAGSTSIQVTVKDGGLKLLKIQD 66
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG+GI KED IVCERFTTSKL +FEDLN+I TFGFRGEALASISHVAHLTIITKT
Sbjct: 67 NGSGINKEDFAIVCERFTTSKLQKFEDLNAIGTFGFRGEALASISHVAHLTIITKTVEMQ 126
Query: 123 CAYR 126
CAY+
Sbjct: 127 CAYK 130
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
+L+ + D ++KV G I+NV+++ K T LLFIN+ P+KR ++ VY+ YL K
Sbjct: 230 DLIKLNVEDPVLKVKVNGLISNVDYAGAKFTMLLFINHRLVDSTPLKRALDSVYATYLAK 289
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVYLS+ + P VDVNVHPTKHEVHFL+ED II ++QS + L ++TSR F Q
Sbjct: 290 GKHPFVYLSIEIAPNCVDVNVHPTKHEVHFLNEDAIIHKIQSTADILLKNASTSRSFAIQ 349
Query: 313 S 313
+
Sbjct: 350 T 350
>gi|350397127|ref|XP_003484778.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Bombus impatiens]
Length = 853
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 148/186 (79%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+IQ+ K+GGLKLLQIQDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGE
Sbjct: 42 KATNIQIIAKEGGLKLLQIQDNGTGIRKEDMEIVCERFTTSKLQAFEDLQAISTFGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH++ LTI TKT CAY+ASY+DSKLK P K CAGNQGT I+ E+LFYN+ TR
Sbjct: 102 ALASISHISLLTITTKTADEKCAYKASYVDSKLKAPPKLCAGNQGTTILIENLFYNVSTR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKA P+EE+NKI+DVV++YA+HNP VGFTLKK E IRT NSS I +YGN
Sbjct: 162 RKAFSNPNEEFNKISDVVTKYAIHNPTVGFTLKKHGEVTPQIRTPHNSSKMNNIRILYGN 221
Query: 492 NISRRV 497
+ R +
Sbjct: 222 PVFREL 227
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 111/126 (88%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
MD KIK+LD+ VVNRIAAGEVIQRPANALKEL+ENSLDAK+T+IQ+ K+GGLKLLQI
Sbjct: 1 MDGAGKIKRLDKIVVNRIAAGEVIQRPANALKELMENSLDAKATNIQIIAKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGEALASISH++ LTI TKT
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQAFEDLQAISTFGFRGEALASISHISLLTITTKTAD 120
Query: 121 SPCAYR 126
CAY+
Sbjct: 121 EKCAYK 126
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 92/121 (76%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL VE TDD ++ K+ +TN N+++K+M FLLFINN I++M+E++Y+ Y+PK
Sbjct: 226 ELLEVELTDDTYRFKMHALVTNPNYTSKRMIFLLFINNRLVESSSIRKMLEEIYTFYIPK 285
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ P+ Y+SL +DP+NVDVNVHPTKHEV FLHE++IIER++ L++ L G++ S+ FY Q
Sbjct: 286 KTHPWCYISLEIDPQNVDVNVHPTKHEVKFLHENSIIERMKLALDEKLSGNSASKTFYVQ 345
Query: 313 S 313
+
Sbjct: 346 A 346
>gi|395734020|ref|XP_002813992.2| PREDICTED: DNA mismatch repair protein Mlh1 [Pongo abelii]
Length = 742
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 207/343 (60%), Gaps = 53/343 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN D S++ L+L ++Q
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENC-DILLESLR------NLRLNKVQ----- 55
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
KED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 56 --KEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 113
Query: 127 WCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
L A + + L+ E+ G E ++ +
Sbjct: 114 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPNEEYGKILEVVGRYSIHN 173
Query: 168 TLVPL-MKSQYQPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG 216
+ +K Q E + + L ++++N+ EL+ + D K+ G
Sbjct: 174 AGISFTVKKQ---GETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNG 230
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+NVD
Sbjct: 231 YISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVD 290
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 291 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 333
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 129/161 (80%)
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 396
++KED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 54 VQKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 113
Query: 397 ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
ASY D KLK P KPCAGNQGTQI EDLFYNI TRRKALK P+EEY KI +VV RY++HN
Sbjct: 114 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPNEEYGKILEVVGRYSIHN 173
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ FT+KKQ E +AD+RT N+S + I +I+GN +SR +
Sbjct: 174 AGISFTVKKQGETVADVRTLPNASTVDNIRSIFGNAVSREL 214
>gi|340521702|gb|EGR51936.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 739
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 211/350 (60%), Gaps = 44/350 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DNG
Sbjct: 29 RIRALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGG 88
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D++I+C R TTSK++ FEDL+SI+T+GFRGEALASISH+AHLT+ TKTK S A+
Sbjct: 89 GIEKDDLEILCVRHTTSKISTFEDLSSIATYGFRGEALASISHIAHLTVTTKTKESSVAW 148
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPL 172
R YL +A A E R QI ++ ++ +R+ E +
Sbjct: 149 R-AHYLDGKLAPAKPGQSAEPKAVAGRQGTQITVEDLFFNVPTRRRAFRSYADEFNKIID 207
Query: 173 MKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGTDDA 209
M +Y Q +++R + +++ N EL+ + +DD
Sbjct: 208 MAGRYAIHCRGVGFTCKKAGEATNTLSIQAQATVIDRIRQIHGSNVAN-ELIEISASDDR 266
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ G++TN N+ KK T LLFIN+ +K+ +EQ YS +LPKG PF+YLSL
Sbjct: 267 WGFSAHGYVTNANYHIKKTTLLLFINHRCVESTSMKKALEQTYSSFLPKGGHPFIYLSLE 326
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP VDVNVHPTK EVHFL+E+ I++ + +E L + SR F TQ+
Sbjct: 327 IDPARVDVNVHPTKREVHFLNEEEILQVICQSIETELAKVDASRTFMTQT 376
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 139/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D++I+C R TTSK++ FEDL+SI+T+GFRGEA
Sbjct: 66 STSLEILVKDGGLKLLQITDNGGGIEKDDLEILCVRHTTSKISTFEDLSSIATYGFRGEA 125
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK S A+RA Y+D KL P KP AG QGTQI EDL
Sbjct: 126 LASISHIAHLTVTTKTKESSVAWRAHYLDGKLA-PAKPGQSAEPKAVAGRQGTQITVEDL 184
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N+PTRR+A + ++E+NKI D+ RYA+H VGFT KK E + ++ +
Sbjct: 185 FFNVPTRRRAFRSYADEFNKIIDMAGRYAIHCRGVGFTCKKAGEATNTLSIQAQATVIDR 244
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G+N++ + S++
Sbjct: 245 IRQIHGSNVANELIEISAS 263
>gi|408399682|gb|EKJ78778.1| hypothetical protein FPSE_01057 [Fusarium pseudograminearum CS3096]
Length = 737
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 208/351 (59%), Gaps = 42/351 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD VVN+IAAGE+I P +ALKEL+EN++DA +TS+ V K+GGLKLLQI DN
Sbjct: 40 PRRIKALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVLAKEGGLKLLQITDN 99
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI+K+D+ I+CER TTSK+T FEDL++I T+GFRGEALASISH+AHL++ TKTK S
Sbjct: 100 GCGIQKDDLAILCERHTTSKITTFEDLSAIETYGFRGEALASISHIAHLSVTTKTKDSDL 159
Query: 124 AYRWCTY---LADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVP 171
A+R Y LA E R QI ++ ++ +R+ E +
Sbjct: 160 AWRAHYYEGKLAPAKPGQSAEPKGVAGRPGTQITVEDLFFNIATRRRAFRSPSDEFNKII 219
Query: 172 LMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGTDD 208
M +Y Q I++R + +++ N ELL ++
Sbjct: 220 DMVGRYAVHCKGVGFTCKKAGEASTNLSIQAHATIIDRIRQIHGSAVAN-ELLEFSVSEA 278
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSL 262
+ + G+ TN N+S KK T LLFIN+ IK+ IEQ Y+ +LPK PF+YLSL
Sbjct: 279 RWGFRAEGYTTNANYSVKKTTILLFINHRCVESTHIKKAIEQTYANFLPKNGHPFIYLSL 338
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP VDVNVHPTK EVHFL+ED II+ + + +E L + SR F TQ+
Sbjct: 339 EIDPARVDVNVHPTKREVHFLNEDEIIQSICAAIESKLAAVDMSRTFMTQT 389
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 137/197 (69%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+ V K+GGLKLLQI DNG GI+K+D+ I+CER TTSK+T FEDL++I T+GFRGEA
Sbjct: 79 ATSLDVLAKEGGLKLLQITDNGCGIQKDDLAILCERHTTSKITTFEDLSAIETYGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S A+RA Y + KL P KP AG GTQI EDL
Sbjct: 139 LASISHIAHLSVTTKTKDSDLAWRAHYYEGKLA-PAKPGQSAEPKGVAGRPGTQITVEDL 197
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+NI TRR+A + PS+E+NKI D+V RYAVH VGFT KK E ++ +++ +
Sbjct: 198 FFNIATRRRAFRSPSDEFNKIIDMVGRYAVHCKGVGFTCKKAGEASTNLSIQAHATIIDR 257
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + FS
Sbjct: 258 IRQIHGSAVANELLEFS 274
>gi|453081577|gb|EMF09626.1| DNA mismatch repair protein MutL [Mycosphaerella populorum SO2202]
Length = 715
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 207/361 (57%), Gaps = 56/361 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +I+ L++ VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK+GGLKLLQI
Sbjct: 20 MQAPRRIRALEQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVKEGGLKLLQI 79
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K+D+ I+CERFTTSKL FEDL +I T+GFRGEALASISH+AHL + TKT
Sbjct: 80 TDNGCGISKDDLPILCERFTTSKLKSFEDLQAIGTYGFRGEALASISHIAHLAVTTKTYD 139
Query: 121 S-------------------------PCAYRWCTYLA--DLM------ALALMEMSQYLQ 147
S PCA R T ++ DL A S+
Sbjct: 140 SSCAWKAHYAGGKLTPAKPGQSEDPKPCAGRQGTQISVEDLFYNVPTRRRAFRSASEEYA 199
Query: 148 RDKEQIGDKEE---------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+ E +G K+ VP + I +R L + ++ N
Sbjct: 200 KIAEVVGKYAVHCQGVAFSCKKHGEAGAGVAVPA-------NANIRDRIRLTQNSNAAN- 251
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + + D + + G ++N N++ KK T LLFIN+ IK+ IEQ YS++LPK
Sbjct: 252 ELIDFQISSDQYGFRAAGLVSNANYNGKKTTMLLFINHRSVDSSAIKKAIEQTYSVFLPK 311
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF+YLSL +DP VDVNVHPTK EV+FL+ED IIE V + L +TSR F TQ
Sbjct: 312 GGKPFIYLSLDIDPARVDVNVHPTKREVNFLNEDEIIELVCEEIRTRLGKVDTSRTFMTQ 371
Query: 313 S 313
S
Sbjct: 372 S 372
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 127/176 (72%), Gaps = 9/176 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK+GGLKLLQI DNG GI K+D+ I+CERFTTSKL FEDL +I T+GFRGEA
Sbjct: 62 STSLEILVKEGGLKLLQITDNGCGISKDDLPILCERFTTSKLKSFEDLQAIGTYGFRGEA 121
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHL + TKT S CA++A Y KL +DP KPCAG QGTQI EDL
Sbjct: 122 LASISHIAHLAVTTKTYDSSCAWKAHYAGGKLTPAKPGQSEDP-KPCAGRQGTQISVEDL 180
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
FYN+PTRR+A + SEEY KIA+VV +YAVH V F+ KK E A + N++
Sbjct: 181 FYNVPTRRRAFRSASEEYAKIAEVVGKYAVHCQGVAFSCKKHGEAGAGVAVPANAN 236
>gi|406868634|gb|EKD21671.1| MutL-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 736
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 200/358 (55%), Gaps = 56/358 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+ENS+DA STS++V VK GGLKLLQI DN
Sbjct: 34 PRRIRALDPDVVNKIAAGEIIVAPVHALKELIENSVDAGSTSLEVLVKDGGLKLLQITDN 93
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHLT+ TKTK S
Sbjct: 94 GHGISKDDLPILCERFTTSKLKSFEDLTSIGTYGFRGEALASISHIAHLTVTTKTKDS-- 151
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQY---- 177
C + A + L D + ++ Q TVE VP + +
Sbjct: 152 ---TCAWRAHYDSGRLAPNKPGQSADPKPTAGRQGTQI--TVEDLFYNVPTRRRAFRSAS 206
Query: 178 ------------------------------------QPSEKIVERACLLEIASLNNLELL 201
Q + V+R + +S+ N EL+
Sbjct: 207 EEYNKILDVIGRYAVHCDGVAFSCKKHGEASTTISTQSNSSTVDRIRQIHGSSVAN-ELI 265
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSF 255
D + + GW TN N+ K+ T LLFIN+ I++ IEQ YS +LPKG
Sbjct: 266 EFTSADSQWGYQARGWTTNANYHVKRATLLLFINHRSVDSTNIRKAIEQTYSTFLPKGGH 325
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+ YLSL +DP VDVNVHPTK EV+FL+ED IIE++ + L +TSR F TQ+
Sbjct: 326 PWTYLSLDIDPHRVDVNVHPTKREVNFLNEDEIIEKICLDIRTKLANVDTSRTFMTQT 383
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 140/199 (70%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 73 STSLEVLVKDGGLKLLQITDNGHGISKDDLPILCERFTTSKLKSFEDLTSIGTYGFRGEA 132
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK S CA+RA Y +L DP KP AG QGTQI EDL
Sbjct: 133 LASISHIAHLTVTTKTKDSTCAWRAHYDSGRLAPNKPGQSADP-KPTAGRQGTQITVEDL 191
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEYNKI DV+ RYAVH V F+ KK E I T NSS +
Sbjct: 192 FYNVPTRRRAFRSASEEYNKILDVIGRYAVHCDGVAFSCKKHGEASTTISTQSNSSTVDR 251
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G++++ + F+SA
Sbjct: 252 IRQIHGSSVANELIEFTSA 270
>gi|326473631|gb|EGD97640.1| DNA mismatch repair protein Mlh1 [Trichophyton tonsurans CBS
112818]
Length = 813
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 205/359 (57%), Gaps = 56/359 (15%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI D
Sbjct: 51 RPRKIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITD 110
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S
Sbjct: 111 NGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSS 170
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPS 180
C + A L+ + I ++ Q TVE VP + ++ +
Sbjct: 171 -----CAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQI--TVEDLFYNVPTRRRAFRSA 223
Query: 181 EK----------------------------------------IVERACLLEIASLNNLEL 200
+ IV+R L ++ N EL
Sbjct: 224 SEEYAKVLDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRIRQLHGGAVAN-EL 282
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+S+E + + W+T N+ KK T L+FIN+ IKR +EQ YS +LPKG
Sbjct: 283 VSLEVDGKRWGCHTSAWVTTANYHAKKTTLLIFINHRAVESTAIKRAVEQTYSTFLPKGG 342
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYL L ++P+ +DVNVHPTK EV+FL+ED IIE + S + L ++SR F TQ+
Sbjct: 343 HPFVYLDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLAAVDSSRTFMTQT 401
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 133/189 (70%), Gaps = 7/189 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 91 STSVEILVREGGLKLLQITDNGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEA 150
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISHVAHLT+ TKT S CA+RA Y D KL KP AG +GTQI EDLF
Sbjct: 151 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLF 210
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY K+ D+V RYAVH F+ KK E + T++NSS + I
Sbjct: 211 YNVPTRRRAFRSASEEYAKVLDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRI 270
Query: 486 GNIYGNNIS 494
++G ++
Sbjct: 271 RQLHGGAVA 279
>gi|156049801|ref|XP_001590867.1| hypothetical protein SS1G_08608 [Sclerotinia sclerotiorum 1980]
gi|154693006|gb|EDN92744.1| hypothetical protein SS1G_08608 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 745
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 202/358 (56%), Gaps = 56/358 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD VVN+IAAGE+I P +ALKEL+EN++DA STSI+V VK GGLKLLQI DN
Sbjct: 31 PRRIKALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDN 90
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KEDM I+CERFTTSKL QFEDL SI T+GFRGEALASISH+AHLT+ T+TK S
Sbjct: 91 GHGINKEDMAILCERFTTSKLKQFEDLTSIGTYGFRGEALASISHIAHLTVTTRTKDS-- 148
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQY---- 177
C + A + L+ D + I + Q TVE +P + +
Sbjct: 149 ---NCAFRAHYDSGRLIPAKPGQGSDPKPIAGRAGTQI--TVEDLFYNIPTRRRAFRSAS 203
Query: 178 ------------------------------------QPSEKIVERACLLEIASLNNLELL 201
Q + V+R + + + N EL+
Sbjct: 204 EEYNKILDVVGRYAIHCDGIAFSCKKHGEASTTISTQIASSTVDRIRQIHGSGVAN-ELI 262
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSF 255
+ D + GW TN N+ KK T LLFIN+ I++ IEQ YS +LPKG
Sbjct: 263 EFKSADPRWGFTAQGWTTNANYHVKKTTLLLFINHRSVESTAIRKAIEQTYSAFLPKGGH 322
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF YL+L ++P+ +DVNVHPTK EV+FL+E+ IIE++ + + L + SR F TQ+
Sbjct: 323 PFTYLNLEIEPQRLDVNVHPTKREVNFLNEEEIIEKICADIRIKLADVDKSRNFMTQT 380
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 138/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG GI KEDM I+CERFTTSKL QFEDL SI T+GFRGEA
Sbjct: 70 STSIEVLVKDGGLKLLQITDNGHGINKEDMAILCERFTTSKLKQFEDLTSIGTYGFRGEA 129
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ T+TK S CA+RA Y +L DP KP AG GTQI EDL
Sbjct: 130 LASISHIAHLTVTTRTKDSNCAFRAHYDSGRLIPAKPGQGSDP-KPIAGRAGTQITVEDL 188
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + SEEYNKI DVV RYA+H + F+ KK E I T + SS +
Sbjct: 189 FYNIPTRRRAFRSASEEYNKILDVVGRYAIHCDGIAFSCKKHGEASTTISTQIASSTVDR 248
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G+ ++ + F SA
Sbjct: 249 IRQIHGSGVANELIEFKSA 267
>gi|327299736|ref|XP_003234561.1| DNA mismatch repair protein Mlh1 [Trichophyton rubrum CBS 118892]
gi|326463455|gb|EGD88908.1| DNA mismatch repair protein Mlh1 [Trichophyton rubrum CBS 118892]
Length = 816
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 205/359 (57%), Gaps = 56/359 (15%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI D
Sbjct: 55 RPRKIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITD 114
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S
Sbjct: 115 NGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSS 174
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPS 180
C + A L+ + I ++ Q TVE VP + ++ +
Sbjct: 175 -----CAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQI--TVEDLFYNVPTRRRAFRSA 227
Query: 181 EK----------------------------------------IVERACLLEIASLNNLEL 200
+ IV+R L ++ N EL
Sbjct: 228 SEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRIRQLHGGAVAN-EL 286
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+S+E + + W+TN N+ KK L+FIN+ IKR +EQ YS +LPKG
Sbjct: 287 VSLEVDGKRWGCHTSAWVTNANYHAKKTALLIFINHRAVESTAIKRAVEQTYSTFLPKGG 346
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYL L ++P+ +DVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ+
Sbjct: 347 HPFVYLDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICTAIRTKLAAVDSSRTFMTQT 405
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 7/189 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 95 STSVEILVREGGLKLLQITDNGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEA 154
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISHVAHLT+ TKT S CA+RA Y D KL KP AG +GTQI EDLF
Sbjct: 155 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLF 214
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI D+V RYAVH F+ KK E + T++NSS + I
Sbjct: 215 YNVPTRRRAFRSASEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRI 274
Query: 486 GNIYGNNIS 494
++G ++
Sbjct: 275 RQLHGGAVA 283
>gi|347837539|emb|CCD52111.1| similar to DNA mismatch repair protein [Botryotinia fuckeliana]
Length = 742
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 201/358 (56%), Gaps = 56/358 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD VVN+IAAGE+I P +ALKEL+EN++DA STS++V VK GGLKLLQI DN
Sbjct: 31 PGRIKALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLVKDGGLKLLQITDN 90
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KEDM I+CERFTTSKL QFEDL SI T+GFRGEALASISH+AHLT+ T+TK S
Sbjct: 91 GHGINKEDMAILCERFTTSKLKQFEDLTSIGTYGFRGEALASISHIAHLTVTTRTKDS-- 148
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQY---- 177
C + A + L+ D + I + Q TVE VP + +
Sbjct: 149 ---NCAFRAHYDSGRLIPAKPGQGSDPKPIAGRPGTQI--TVEDLFYNVPTRRRAFRSAS 203
Query: 178 ------------------------------------QPSEKIVERACLLEIASLNNLELL 201
Q + V+R + + + N EL+
Sbjct: 204 EEYNKILDVVGRYAIHCKGVAFSCKKHGEASTTISTQLASSTVDRIRQIHGSGVAN-ELI 262
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSF 255
+ D + GW TN N+ KK T LLFIN+ I++ IEQ YS +LPKG
Sbjct: 263 EFKSADPQWGFTAQGWTTNANYHVKKTTLLLFINHRAVESTAIRKAIEQTYSAFLPKGGH 322
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF YL+L ++P +DVNVHPTK EV+FL+E+ IIE++ + + L + SR F TQ+
Sbjct: 323 PFTYLNLEIEPHRLDVNVHPTKREVNFLNEEEIIEKICNDIRIKLADVDKSRNFMTQT 380
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 138/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V VK GGLKLLQI DNG GI KEDM I+CERFTTSKL QFEDL SI T+GFRGEA
Sbjct: 70 STSLEVLVKDGGLKLLQITDNGHGINKEDMAILCERFTTSKLKQFEDLTSIGTYGFRGEA 129
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ T+TK S CA+RA Y +L DP KP AG GTQI EDL
Sbjct: 130 LASISHIAHLTVTTRTKDSNCAFRAHYDSGRLIPAKPGQGSDP-KPIAGRPGTQITVEDL 188
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEYNKI DVV RYA+H V F+ KK E I T + SS +
Sbjct: 189 FYNVPTRRRAFRSASEEYNKILDVVGRYAIHCKGVAFSCKKHGEASTTISTQLASSTVDR 248
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G+ ++ + F SA
Sbjct: 249 IRQIHGSGVANELIEFKSA 267
>gi|302496819|ref|XP_003010410.1| DNA mismatch repair protein, putative [Arthroderma benhamiae CBS
112371]
gi|291173953|gb|EFE29770.1| DNA mismatch repair protein, putative [Arthroderma benhamiae CBS
112371]
Length = 840
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 203/354 (57%), Gaps = 56/354 (15%)
Query: 8 KKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGI 67
K LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI DNG GI
Sbjct: 84 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGHGI 143
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRW 127
+D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S
Sbjct: 144 DHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSS----- 198
Query: 128 CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSEK--- 182
C + A L+ + I ++ Q TVE VP + ++ + +
Sbjct: 199 CAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQI--TVEDLFYNVPTRRRAFRSASEEYA 256
Query: 183 -------------------------------------IVERACLLEIASLNNLELLSVEG 205
I++R L ++ N EL+S+E
Sbjct: 257 KILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSILDRIRQLHGGAVAN-ELVSLEV 315
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+ + + W+TN N+ KK T L+FIN+ IKR +EQ YS +LPKG PFVY
Sbjct: 316 DGKRWGCRASAWVTNANYHAKKTTLLIFINHRAVESTAIKRAVEQTYSTFLPKGGHPFVY 375
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
L L ++P+ +DVNVHPTK EV+FL+ED IIE + S + L ++SR F TQ+
Sbjct: 376 LDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLAAVDSSRTFMTQT 429
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 133/189 (70%), Gaps = 7/189 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 119 STSVEILVREGGLKLLQITDNGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEA 178
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISHVAHLT+ TKT S CA+RA Y D KL KP AG +GTQI EDLF
Sbjct: 179 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLF 238
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI D+V RYAVH F+ KK E + T++NSS + I
Sbjct: 239 YNVPTRRRAFRSASEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSILDRI 298
Query: 486 GNIYGNNIS 494
++G ++
Sbjct: 299 RQLHGGAVA 307
>gi|452978595|gb|EME78358.1| hypothetical protein MYCFIDRAFT_80777 [Pseudocercospora fijiensis
CIRAD86]
Length = 712
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 211/354 (59%), Gaps = 42/354 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +I+ L++ VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK+GGLKLLQI
Sbjct: 16 LQAPRRIRALEQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVKEGGLKLLQI 75
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K+DM I+CERFTTSKL FEDL +I T+GFRGEALASISH+AHL++ TKT
Sbjct: 76 TDNGCGISKDDMPILCERFTTSKLKAFEDLQAIGTYGFRGEALASISHIAHLSVTTKTAD 135
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQ----RDKEQIGDKE-------EKQWYRTV--EH 167
S CA++ Y + A S + R QI ++ ++ +R+ E+
Sbjct: 136 SSCAWK-AHYAGGKLTPAKPGQSADPKACAGRQGTQIAVEDLFYNVPTRRRAFRSASEEY 194
Query: 168 TLVPLMKSQYQPSEKIVERACL------LEIASLNNL----------------ELLSVEG 205
+ + +Y + V +C L IA N EL+ +
Sbjct: 195 AKIAELVGKYSVHCQGVAFSCKKHGEAGLGIAVPANASIRDRIRLTHSTTVANELIEFQI 254
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+++ + G ++N N+ K+ T LLFIN+ IK+ +EQ YS++LPKGS PFVY
Sbjct: 255 SNEPYGFTAKGLVSNANYGGKRTTLLLFINHRSVESSAIKKALEQTYSVFLPKGSKPFVY 314
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL +D VDVNVHPTK EV+FL+E+ I+E V + L +TSR F TQS
Sbjct: 315 LSLEIDAARVDVNVHPTKREVNFLNEEEIVELVCEEVRTRLGKVDTSRTFMTQS 368
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 130/191 (68%), Gaps = 17/191 (8%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK+GGLKLLQI DNG GI K+DM I+CERFTTSKL FEDL +I T+GFRGEA
Sbjct: 58 STSLEILVKEGGLKLLQITDNGCGISKDDMPILCERFTTSKLKAFEDLQAIGTYGFRGEA 117
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKT S CA++A Y KL P KP CAG QGTQI EDL
Sbjct: 118 LASISHIAHLSVTTKTADSSCAWKAHYAGGKLT-PAKPGQSADPKACAGRQGTQIAVEDL 176
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL--------ADIRTN 476
FYN+PTRR+A + SEEY KIA++V +Y+VH V F+ KK E A IR
Sbjct: 177 FYNVPTRRRAFRSASEEYAKIAELVGKYSVHCQGVAFSCKKHGEAGLGIAVPANASIRDR 236
Query: 477 VNSSHSEVIGN 487
+ +HS + N
Sbjct: 237 IRLTHSTTVAN 247
>gi|380024561|ref|XP_003696063.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Apis florea]
Length = 859
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 121/186 (65%), Positives = 147/186 (79%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++ +IQ+ K+GGLKLLQIQDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGE
Sbjct: 42 KANNIQIIAKEGGLKLLQIQDNGTGIRKEDMEIVCERFTTSKLQTFEDLQTISTFGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH++ LTI TKT CAY+ASY+DSKLK P+K CAGNQGT I+ E+LFYN+ TR
Sbjct: 102 ALASISHISLLTITTKTANEKCAYKASYVDSKLKAPLKSCAGNQGTTIVIENLFYNVATR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKAL P+EE+N+I DVV++YA+HN +VGF LKK E IRT NS+ I +YGN
Sbjct: 162 RKALSNPNEEFNRITDVVTKYAIHNANVGFVLKKHGEIAPQIRTPHNSTKMNNIRILYGN 221
Query: 492 NISRRV 497
+ R +
Sbjct: 222 PVFREL 227
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 110/126 (87%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ KIKKLDE VVNRIAAGEVIQRPANALKEL+ENSLDAK+ +IQ+ K+GGLKLLQI
Sbjct: 1 MNPSGKIKKLDEVVVNRIAAGEVIQRPANALKELIENSLDAKANNIQIIAKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGEALASISH++ LTI TKT
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQTFEDLQTISTFGFRGEALASISHISLLTITTKTAN 120
Query: 121 SPCAYR 126
CAY+
Sbjct: 121 EKCAYK 126
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 101/150 (67%), Gaps = 9/150 (6%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL VE DD ++ K+ ITN N++ KKM FLLFINN I++M+E++Y+ YLPK
Sbjct: 226 ELLEVEFKDDTYKFKMHALITNANYTNKKMIFLLFINNRLVKSSSIQKMLEELYTFYLPK 285
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ P+ Y+SL +DP+N+DVNVHPTKHEV FLHE++IIER++ L++ L ++ SR FY +
Sbjct: 286 KTHPWCYISLEIDPRNIDVNVHPTKHEVKFLHENSIIERMKLTLDEKLSANSASRTFYLK 345
Query: 313 STSIQVTVKQGGLKLL---QIQDNGTGIRK 339
+ + + + LK + +DN I+K
Sbjct: 346 NRLPKADITKEVLKEILPEYEEDNSNKIKK 375
>gi|358384705|gb|EHK22302.1| hypothetical protein TRIVIDRAFT_28941 [Trichoderma virens Gv29-8]
Length = 735
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 207/349 (59%), Gaps = 42/349 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DNG
Sbjct: 26 RIRALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGG 85
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED++I+C R TTSK++ FEDL+SI+T+GFRGEALASISH+AHLT+ TKTK S A+
Sbjct: 86 GIEKEDLEILCVRHTTSKISTFEDLSSIATYGFRGEALASISHIAHLTVTTKTKESSLAW 145
Query: 126 RWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPL 172
R YL +A E R QI ++ ++ +R+ E +
Sbjct: 146 R-AHYLDGKLAPPKPGQSAEPKGVAGRQGTQITVEDLFFNVPTRRRAFRSYADEFNKIID 204
Query: 173 MKSQYQPSEKIVERACLLEIASLNNL----------------------ELLSVEGTDDAF 210
M +Y K V C + N+L EL+ + +DD +
Sbjct: 205 MAGRYAIHCKGVGFTCKKAGEASNSLSVQAQATVIDRIRQIHGSNVANELIELSVSDDRW 264
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
G++TN N+ KK T LLFIN+ +K+ +EQ Y+ +LPKG PF+YLSL +
Sbjct: 265 GFSANGYVTNANYHIKKTTLLLFINHRCVESSTMKKALEQTYTSFLPKGGHPFIYLSLEI 324
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DP VDVNVHPTK EVHFL+E+ +I+ + +E L + SR F TQ+
Sbjct: 325 DPARVDVNVHPTKREVHFLNEEEVIQAICKKIELELATVDESRTFLTQT 373
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI KED++I+C R TTSK++ FEDL+SI+T+GFRGEA
Sbjct: 63 STSLEILVKDGGLKLLQITDNGGGIEKEDLEILCVRHTTSKISTFEDLSSIATYGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKTK S A+RA Y+D KL P K AG QGTQI EDLF
Sbjct: 123 LASISHIAHLTVTTKTKESSLAWRAHYLDGKLAPPKPGQSAEPKGVAGRQGTQITVEDLF 182
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
+N+PTRR+A + ++E+NKI D+ RYA+H VGFT KK E + ++ + I
Sbjct: 183 FNVPTRRRAFRSYADEFNKIIDMAGRYAIHCKGVGFTCKKAGEASNSLSVQAQATVIDRI 242
Query: 486 GNIYGNNISRRVRRFS 501
I+G+N++ + S
Sbjct: 243 RQIHGSNVANELIELS 258
>gi|440639881|gb|ELR09800.1| hypothetical protein GMDG_04283 [Geomyces destructans 20631-21]
Length = 718
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 200/358 (55%), Gaps = 56/358 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK L+ VVN+IAAGE+I P +ALKEL+ENS+DA ST++ V VK GGLKLLQI DN
Sbjct: 27 PRRIKALNPDVVNKIAAGEIIVAPVHALKELIENSVDAGSTALDVVVKDGGLKLLQITDN 86
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KED+ I+CERFTTSKL FEDL SI T+GFRGEALASIS++AHLT+ T+TK S
Sbjct: 87 GHGIDKEDLSILCERFTTSKLKSFEDLTSIGTYGFRGEALASISYIAHLTVTTRTKDS-- 144
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSE 181
C Y A + L + + + ++ Q TVE +P + ++ +
Sbjct: 145 ---NCAYRASYASCKLSPPKPGQSAEPKPVAGRQGTQI--TVEDLFYNIPTRRRAFRSAS 199
Query: 182 K----------------------------------------IVERACLLEIASLNNLELL 201
+ ER + +++ N EL+
Sbjct: 200 EEYNKILDMVGRYAVHCSGVAFSCKKHSESSTSLSVSQNASTTERIRQIHGSAVAN-ELV 258
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSF 255
+ F GW TN N+ KK T LLFIN+ I++ IEQ YS +LPKG
Sbjct: 259 QFSSAESRFGFVANGWTTNANYHVKKTTLLLFINHRCVESSNIRKAIEQTYSTFLPKGGH 318
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF YL+L +DP+ VDVNVHPTK EV+FL+ED IIE++ + L +TSR F TQS
Sbjct: 319 PFTYLNLEIDPQRVDVNVHPTKREVNFLNEDEIIEQICIDIRVKLANIDTSRTFMTQS 376
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++ V VK GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 66 STALDVVVKDGGLKLLQITDNGHGIDKEDLSILCERFTTSKLKSFEDLTSIGTYGFRGEA 125
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASIS++AHLT+ T+TK S CAYRASY KL P KP AG QGTQI EDLF
Sbjct: 126 LASISYIAHLTVTTRTKDSNCAYRASYASCKLSPPKPGQSAEPKPVAGRQGTQITVEDLF 185
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YNIPTRR+A + SEEYNKI D+V RYAVH V F+ KK +E+ + + N+S +E I
Sbjct: 186 YNIPTRRRAFRSASEEYNKILDMVGRYAVHCSGVAFSCKKHSESSTSLSVSQNASTTERI 245
Query: 486 GNIYGNNISRRVRRFSSA 503
I+G+ ++ + +FSSA
Sbjct: 246 RQIHGSAVANELVQFSSA 263
>gi|255561542|ref|XP_002521781.1| DNA mismatch repair protein mlh1, putative [Ricinus communis]
gi|223538994|gb|EEF40591.1| DNA mismatch repair protein mlh1, putative [Ricinus communis]
Length = 735
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 225/381 (59%), Gaps = 45/381 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI +L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI V VK GGLKL+Q+ D
Sbjct: 19 EPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVVVKDGGLKLIQVSD 78
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ +EDL SI + GFRGEALAS+++VAH+T+ T T+
Sbjct: 79 DGHGIRYEDLPILCERHTTSKLSTYEDLQSIKSMGFRGEALASMTYVAHVTVTTITEGQL 138
Query: 123 CAYRWCTYLADLM-----ALALMEMSQY---------------LQRDKEQIGDKEEKQWY 162
YR +Y +M A A ++ +Q LQ + +
Sbjct: 139 HGYR-VSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYSKVVDLLSR 197
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE-------------LLSVEGTDDA 209
++ HT V ++ + RA + +A+ + L+ L+ +E +D+A
Sbjct: 198 FSIHHTNVSFSCRKHGAA-----RADIHSVATSSRLDSIRTVYGASAARNLMKIEASDEA 252
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+ G+I+N N+ KK T +LFIN+ +KR +E VY+ LPK S PFVY+S+
Sbjct: 253 SNFDMNGFISNSNYVAKKTTMVLFINDRLVECTTLKRALEIVYTATLPKASKPFVYMSVV 312
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
+ P++VDVNVHPTK EV L+++TI+E++Q +E L SN ++ F Q+ + G
Sbjct: 313 LPPEHVDVNVHPTKREVSLLNQETIVEKIQLAVESKLRSSNEAKSFQEQTIDPSPSCPLG 372
Query: 324 GLKLLQIQDNGTGIRKEDMDI 344
K L++ + G + + + +
Sbjct: 373 TGKDLKVDPSSNGSKAQKVPV 393
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 135/197 (68%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
STSI V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL SI + GFRG
Sbjct: 57 AHSTSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTYEDLQSIKSMGFRG 116
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++VAH+T+ T T+ YR SY D ++ K CA +GTQI+ E+LFYN+
Sbjct: 117 EALASMTYVAHVTVTTITEGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIA 176
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK L+ +++Y+K+ D++SR+++H+ +V F+ +K ADI + SS + I +YG
Sbjct: 177 RRKTLQNSADDYSKVVDLLSRFSIHHTNVSFSCRKHGAARADIHSVATSSRLDSIRTVYG 236
Query: 491 NNISRRVRRFSSASQSA 507
+ +R + + ++ +++
Sbjct: 237 ASAARNLMKIEASDEAS 253
>gi|452838768|gb|EME40708.1| hypothetical protein DOTSEDRAFT_90852 [Dothistroma septosporum
NZE10]
Length = 716
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 211/360 (58%), Gaps = 57/360 (15%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+PP+ I+ L + VVN+IAAGE+I P +ALKEL+EN++DA STS+++ V++GGLKLLQI
Sbjct: 21 EPPRRIRALQQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVREGGLKLLQIT 80
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG GI K+D+ I+CERFTTSKL FEDL +I T+GFRGEALASISH+AHL++ TKT S
Sbjct: 81 DNGCGINKDDLSILCERFTTSKLKAFEDLQAIGTYGFRGEALASISHIAHLSVTTKTAES 140
Query: 122 PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQP 179
CA++ A + L L D + ++ Q TVE VP + ++
Sbjct: 141 SCAWK-----AQYASGKLTPAKPGLSPDPKACAGRQGTQI--TVEDLFYNVPTRRRAFRS 193
Query: 180 SE----KIVE------------------------------------RACLLEIASLNNLE 199
+ KI E R L + +S+ N +
Sbjct: 194 ASEEFAKIAELVGKYAVHCQNVAFSCKKHGEGGSAIAVPANASVRSRIRLTQSSSVVN-D 252
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKG 253
L+ ++ T++ + + G ++N N S K+ + LLFIN+ IK+ +EQ Y+ +LPKG
Sbjct: 253 LIELQITNEQYGFRADGLVSNANHSAKRTSLLLFINHRAVESSSIKKSVEQTYAAFLPKG 312
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYLSL +DP VDVNVHPTK EV+FL+E+ IIE V + L +TSR F TQS
Sbjct: 313 GKPFVYLSLEIDPARVDVNVHPTKREVNFLNEEEIIELVCEEVRTHLGKVDTSRTFMTQS 372
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 127/176 (72%), Gaps = 9/176 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI K+D+ I+CERFTTSKL FEDL +I T+GFRGEA
Sbjct: 62 STSLEILVREGGLKLLQITDNGCGINKDDLSILCERFTTSKLKAFEDLQAIGTYGFRGEA 121
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKT S CA++A Y KL P KP CAG QGTQI EDL
Sbjct: 122 LASISHIAHLSVTTKTAESSCAWKAQYASGKLT-PAKPGLSPDPKACAGRQGTQITVEDL 180
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
FYN+PTRR+A + SEE+ KIA++V +YAVH +V F+ KK E + I N+S
Sbjct: 181 FYNVPTRRRAFRSASEEFAKIAELVGKYAVHCQNVAFSCKKHGEGGSAIAVPANAS 236
>gi|302894255|ref|XP_003046008.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726935|gb|EEU40295.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 702
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 205/349 (58%), Gaps = 46/349 (13%)
Query: 8 KKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGI 67
+ LD VVN+IAAGE+I P +ALKEL+EN++DA +TS+ V K GGLKLLQI DNG GI
Sbjct: 9 QALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVMAKDGGLKLLQITDNGCGI 68
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRW 127
+K+D+ I+CER TTSK++ FEDL++I T+GFRGEALASISH+AHL++ TKTK S A W
Sbjct: 69 QKDDLAILCERHTTSKISTFEDLSAIETYGFRGEALASISHIAHLSVTTKTKDSDLA--W 126
Query: 128 CTYLADLMALAL-----MEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPLM 173
+ D A E R QI ++ ++ +R+ E + M
Sbjct: 127 RAHYLDGRLTAPKPGQSAEPRGVAGRPGTQITVEDLFYNVPTRRRAFRSTADEFNKIIDM 186
Query: 174 KSQY-----------------------QPSEKIVERACLLEIASLNNLELLSVEGTDDAF 210
+Y Q +++R + +S+ N ELL+ ++D +
Sbjct: 187 VGRYAVHCKGVGFTCKKAGEASTSLSVQAHATVIDRIRQIHGSSVAN-ELLAFATSEDRW 245
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
K G+ TN N+S KK T LLFIN+ IK+ +EQ YS +LPK PF+YLSL +
Sbjct: 246 GFKAEGYTTNANYSVKKTTLLLFINHRCVESTHIKKAVEQTYSNFLPKNGHPFIYLSLEI 305
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DP VDVNVHPTK EVHFL+ED II+ + +E L +TSR F TQ+
Sbjct: 306 DPARVDVNVHPTKKEVHFLNEDEIIQAICEHIESKLAAVDTSRTFMTQT 354
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 139/199 (69%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+ V K GGLKLLQI DNG GI+K+D+ I+CER TTSK++ FEDL++I T+GFRGEA
Sbjct: 44 ATSLDVMAKDGGLKLLQITDNGCGIQKDDLAILCERHTTSKISTFEDLSAIETYGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL++ TKTK S A+RA Y+D +L P KP AG GTQI EDL
Sbjct: 104 LASISHIAHLSVTTKTKDSDLAWRAHYLDGRLTAP-KPGQSAEPRGVAGRPGTQITVEDL 162
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + ++E+NKI D+V RYAVH VGFT KK E + +++ +
Sbjct: 163 FYNVPTRRRAFRSTADEFNKIIDMVGRYAVHCKGVGFTCKKAGEASTSLSVQAHATVIDR 222
Query: 485 IGNIYGNNISRRVRRFSSA 503
I I+G++++ + F+++
Sbjct: 223 IRQIHGSSVANELLAFATS 241
>gi|398391929|ref|XP_003849424.1| hypothetical protein MYCGRDRAFT_75629 [Zymoseptoria tritici IPO323]
gi|339469301|gb|EGP84400.1| hypothetical protein MYCGRDRAFT_75629 [Zymoseptoria tritici IPO323]
Length = 714
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 208/354 (58%), Gaps = 42/354 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +I+ L + VVN+IAAGE+I P +ALKEL+EN++DA +TS+++ VK+GGLKLLQI
Sbjct: 21 MQSPRRIRALHQDVVNKIAAGEIIVAPVHALKELIENAVDAGATSLEILVKEGGLKLLQI 80
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL +FEDL +I T+GFRGEALASISH+AHL + TKT
Sbjct: 81 TDNGCGISKEDLPILCERFTTSKLKEFEDLQAIGTYGFRGEALASISHIAHLAVTTKTAD 140
Query: 121 SPC---AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHT 168
S C AY L E R QI ++ ++ +R+ E+
Sbjct: 141 SSCAWKAYYAGGNLTPAKPGQSAEPRACAGRQGTQITVEDLFYNVPTRRRAFRSASEEYA 200
Query: 169 LVPLMKSQYQPSEKIVERAC-----------------------LLEIASLNNLELLSVEG 205
+ + +Y + V +C L+ +++ N +L+ +
Sbjct: 201 KIAELVGKYAVHCQGVAFSCKKHGEAGAGVAVPANAAMRDRVRLIHNSAVAN-DLIDIRV 259
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVY 259
+D + K G ++N N S K+ T LLFIN+ IK+ +EQ Y +LPKG+ PF+Y
Sbjct: 260 ENDQYGFKAEGLVSNSNHSGKRTTMLLFINHRSVDSSIIKKAVEQTYQAFLPKGAKPFLY 319
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
LSL +DP VDVNVHPTK EV+ L+E+ I+E + + K+L +TSR F TQS
Sbjct: 320 LSLEIDPARVDVNVHPTKREVNILNEEEIVELICEDIRKSLGKVDTSRTFMTQS 373
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 132/190 (69%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK+GGLKLLQI DNG GI KED+ I+CERFTTSKL +FEDL +I T+GFRGEA
Sbjct: 63 ATSLEILVKEGGLKLLQITDNGCGISKEDLPILCERFTTSKLKEFEDLQAIGTYGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHL + TKT S CA++A Y L P KP CAG QGTQI EDL
Sbjct: 123 LASISHIAHLAVTTKTADSSCAWKAYYAGGNLT-PAKPGQSAEPRACAGRQGTQITVEDL 181
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KIA++V +YAVH V F+ KK E A + N++ +
Sbjct: 182 FYNVPTRRRAFRSASEEYAKIAELVGKYAVHCQGVAFSCKKHGEAGAGVAVPANAAMRDR 241
Query: 485 IGNIYGNNIS 494
+ I+ + ++
Sbjct: 242 VRLIHNSAVA 251
>gi|85108177|ref|XP_962522.1| hypothetical protein NCU08309 [Neurospora crassa OR74A]
gi|28924130|gb|EAA33286.1| hypothetical protein NCU08309 [Neurospora crassa OR74A]
Length = 751
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 52/356 (14%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DN
Sbjct: 28 PRRIRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDN 87
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEALASISH+AHLT+ TKT+ S
Sbjct: 88 GCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHIAHLTVTTKTQESN- 146
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTV--E 166
C + A + L+ D + + ++ ++ +R+ E
Sbjct: 147 ----CAWRAHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDE 202
Query: 167 HTLVPLMKSQY-----------------------QPSEKIVERACLLEIASLNNLELLSV 203
+ + M +Y Q + +R + S+ N EL+
Sbjct: 203 YNKIIDMVGRYAVHCSHVAFSCKKYGESSTSIAIQANASSTDRIRQIYGGSVAN-ELIEY 261
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPF 257
+DD + K G TN N+S KK T LLFIN+ I++ +EQ Y+ +LPK PF
Sbjct: 262 STSDDRWGFKAQGLATNANYSLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPF 321
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VYLSL + P+ VDVNVHPTK EV+FL+E II+ + + L +TSR F TQ+
Sbjct: 322 VYLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQT 377
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 143/199 (71%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEA
Sbjct: 67 STSLEIVVKDGGLKLLQITDNGCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 127 LASISHIAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 185
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I N+S ++
Sbjct: 186 FYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKYGESSTSIAIQANASSTDR 245
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG +++ + +S++
Sbjct: 246 IRQIYGGSVANELIEYSTS 264
>gi|326426663|gb|EGD72233.1| hypothetical protein PTSG_00253 [Salpingoeca sp. ATCC 50818]
Length = 891
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 211/351 (60%), Gaps = 48/351 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +L+E VVNRIAAGEVIQRPANA+KE+ EN+LDA ++SI V VK GGLK+LQIQD+G
Sbjct: 6 RIVRLEEDVVNRIAAGEVIQRPANAIKEMFENALDAGASSISVVVKSGGLKMLQIQDDGH 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA---LASISHV------------- 109
GI ++DMDIVCERFTTSKLT+FEDL +I+T GFRGEA ++ ++H+
Sbjct: 66 GINRKDMDIVCERFTTSKLTKFEDLTTIATHGFRGEALASISHVAHLSIISRTKDSPCAY 125
Query: 110 -AH-----LTIITKTKTS---PCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE 158
AH LT K S PCA T + DL + + L+ +++ +
Sbjct: 126 KAHYRDGKLTPPKPGKPSDPKPCAGNQGTQITVEDLF-FNVPTRRRALKSPSDELNRIMD 184
Query: 159 KQWYRTVEHTLV-----------PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTD 207
V ++ V PL+++ P + + + + N ELL +E D
Sbjct: 185 IMSRYAVHNSGVGVSLKKHGETSPLLRTT--PGATTRDNIAAIYGSKVAN-ELLEIEDAD 241
Query: 208 DAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLS 261
+ KV G+ITN N+S KK T LLFIN+ I++ ++ VY+ YLP+ + F Y+S
Sbjct: 242 EELAFKVRGFITNANYSVKKPTLLLFINHRAVHSTNIRKALDSVYAAYLPRHTHCFAYIS 301
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
L + P++VDVNVHPTK EVHFLHE+ I+ER+Q ++ K L+G N SR F TQ
Sbjct: 302 LEIKPEHVDVNVHPTKKEVHFLHEEDIVERLQQLVSKRLVGGNMSRTFQTQ 352
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 148/200 (74%), Gaps = 7/200 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++SI V VK GGLK+LQIQD+G GI ++DMDIVCERFTTSKLT+FEDL +I+T GFRGEA
Sbjct: 43 ASSISVVVKSGGLKMLQIQDDGHGINRKDMDIVCERFTTSKLTKFEDLTTIATHGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISHVAHL+II++TK SPCAY+A Y D KL P KPCAGNQGTQI EDLF
Sbjct: 103 LASISHVAHLSIISRTKDSPCAYKAHYRDGKLTPPKPGKPSDPKPCAGNQGTQITVEDLF 162
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
+N+PTRR+ALK PS+E N+I D++SRYAVHN VG +LKK E +RT ++ + I
Sbjct: 163 FNVPTRRRALKSPSDELNRIMDIMSRYAVHNSGVGVSLKKHGETSPLLRTTPGATTRDNI 222
Query: 486 GNIYGNNISRRVRRFSSASQ 505
IYG+ ++ + A +
Sbjct: 223 AAIYGSKVANELLEIEDADE 242
>gi|449295892|gb|EMC91913.1| hypothetical protein BAUCODRAFT_152270 [Baudoinia compniacensis
UAMH 10762]
Length = 714
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 210/361 (58%), Gaps = 56/361 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ P +I+ L E VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI
Sbjct: 20 MEGPRRIRALHEDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQI 79
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-- 118
DNG GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHLT+ TKT
Sbjct: 80 TDNGCGINKDDLPILCERFTTSKLKAFEDLQSIGTYGFRGEALASISHIAHLTVTTKTAD 139
Query: 119 ------------KTSP-----------CAYRWCTYLA--DLM------ALALMEMSQYLQ 147
K +P CA R T +A DL A S+
Sbjct: 140 SSCAWKAHYEGGKLAPAKPGQGADPKACAGRQGTQIAVEDLFYNVPTRRRAFRSASEEYA 199
Query: 148 RDKEQIGDKEE---------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+ +Q+G K+ VP+ + + +R ++ +++ N
Sbjct: 200 KIADQVGRYAVHCKGVAFSCKKHGEAGAGIAVPV-------NATVKDRIRIVHNSAIAN- 251
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ VE + + K+ G +++ N+S KK T LLFIN+ IK+ +EQ YS +LPK
Sbjct: 252 ELVEVELENVQYGFKIDGLVSSANYSGKKTTLLLFINHRSVDSSAIKKAVEQTYSNFLPK 311
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVYLSL ++P VDVNVHPTK EV+FL+ED IIE + + L +TSR F Q
Sbjct: 312 GGKPFVYLSLEINPARVDVNVHPTKREVNFLNEDEIIELLCDEIRMRLGKVDTSRTFMMQ 371
Query: 313 S 313
S
Sbjct: 372 S 372
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 132/190 (69%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 62 STSLEILVKDGGLKLLQITDNGCGINKDDLPILCERFTTSKLKAFEDLQSIGTYGFRGEA 121
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA++A Y KL P KP CAG QGTQI EDL
Sbjct: 122 LASISHIAHLTVTTKTADSSCAWKAHYEGGKLA-PAKPGQGADPKACAGRQGTQIAVEDL 180
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KIAD V RYAVH V F+ KK E A I VN++ +
Sbjct: 181 FYNVPTRRRAFRSASEEYAKIADQVGRYAVHCKGVAFSCKKHGEAGAGIAVPVNATVKDR 240
Query: 485 IGNIYGNNIS 494
I ++ + I+
Sbjct: 241 IRIVHNSAIA 250
>gi|328780324|ref|XP_001120100.2| PREDICTED: DNA mismatch repair protein Mlh1 [Apis mellifera]
Length = 891
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 155/210 (73%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R ++ L++ + S ++ +IQ+ K+GGLKLLQIQDNGTGIRKEDM+IVCE
Sbjct: 23 VIQRPENALKELIENS-----LDAKANNIQIIAKEGGLKLLQIQDNGTGIRKEDMEIVCE 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL FEDL +ISTFGFRGEALASISH++ LTI TKT CAY+ASY+D KLK P
Sbjct: 78 RFTTSKLQTFEDLQTISTFGFRGEALASISHISLLTITTKTADEKCAYKASYVDGKLKAP 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+K CAGNQGT I+ E+LFYN+ TRRKAL P+EE+N+I DVV++YA+HN GF LKK
Sbjct: 138 LKSCAGNQGTTIVIENLFYNVATRRKALSNPNEEFNRITDVVTKYAIHNADTGFVLKKHG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
E IRT NS+ I +YGN + R +
Sbjct: 198 EIAPQIRTPHNSTKMNNIRILYGNPVFREL 227
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 109/126 (86%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ KIKKLDE VVNRIAAGEVIQRP NALKEL+ENSLDAK+ +IQ+ K+GGLKLLQI
Sbjct: 1 MNTSGKIKKLDEVVVNRIAAGEVIQRPENALKELIENSLDAKANNIQIIAKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIRKEDM+IVCERFTTSKL FEDL +ISTFGFRGEALASISH++ LTI TKT
Sbjct: 61 QDNGTGIRKEDMEIVCERFTTSKLQTFEDLQTISTFGFRGEALASISHISLLTITTKTAD 120
Query: 121 SPCAYR 126
CAY+
Sbjct: 121 EKCAYK 126
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 101/150 (67%), Gaps = 9/150 (6%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL VE DD ++ K+ ITN N++ KKM FLLFINN I++M+E++YS YLPK
Sbjct: 226 ELLEVEFKDDTYKFKMHALITNANYTNKKMIFLLFINNRLVKSSSIQKMLEELYSFYLPK 285
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ P+ Y+SL +DP+N+DVNVHPTKHEV FLHE++IIER++ L++ L ++ SR FY +
Sbjct: 286 KTHPWCYISLEIDPRNIDVNVHPTKHEVKFLHENSIIERMKLALDEKLSANSASRTFYLK 345
Query: 313 STSIQVTVKQGGLKLL---QIQDNGTGIRK 339
+ + + + LK + +DN I+K
Sbjct: 346 TRLPKADITKEVLKEILPEYEEDNSNKIKK 375
>gi|357455563|ref|XP_003598062.1| DNA mismatch repair protein Mlh1 [Medicago truncatula]
gi|355487110|gb|AES68313.1| DNA mismatch repair protein Mlh1 [Medicago truncatula]
Length = 764
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 224/382 (58%), Gaps = 40/382 (10%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ PPKI++L E+VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI +T+K GGLKL+Q+
Sbjct: 1 MESPPKIQRLAESVVNRIAAGEVIQRPVSAVKELVENSLDAASTSINLTIKDGGLKLIQV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK- 119
D+G GIR+ED+ I+CER TTSKL+ FEDL I++ GFRGEALAS+++VAH+T+ T TK
Sbjct: 61 SDDGHGIRREDLPILCERHTTSKLSAFEDLQRITSMGFRGEALASMTYVAHVTVTTITKG 120
Query: 120 -----------------TSPC-AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQW 161
PC A + + + + + + LQ + +
Sbjct: 121 QLHGYRVSYRDGVMEQEPRPCAAVKGTQIMVENLFYNMAARKKTLQNSSDDYSKIVDVVS 180
Query: 162 YRTVEHTLVPLMKSQY----------QPSEKIVERACLLEIASLNNLELLSVEGTDD--- 208
+ HT V ++ S ++ + +++ +NL + V+ +D+
Sbjct: 181 RFAIHHTNVSFSCRKHGAVKADVHTVATSSRLDAIRTVYGVSAAHNL--IEVQASDNDPS 238
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSL 262
+ ++ G+++N N++ KK+T +LFIN+ +KR IE VY+ PK S PF+Y+S+
Sbjct: 239 SSIFEMHGYVSNANYAAKKITMVLFINDRLVEWSALKRAIEIVYAATFPKASKPFIYISI 298
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQ 322
+ P+N+DVNVHPTK EV L+++ +IE++Q ++E TL SN +R F Q+ T +
Sbjct: 299 VLPPENIDVNVHPTKREVSLLNQEVVIEKIQLVIESTLRNSNDARTFQEQTAGQFSTSRT 358
Query: 323 GGLKLLQIQDNGTGIRKEDMDI 344
K + + G R + + +
Sbjct: 359 NKSKEVNLSPTPPGSRSQKVPV 380
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 128/178 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI +T+K GGLKL+Q+ D+G GIR+ED+ I+CER TTSKL+ FEDL I++ GFRGEA
Sbjct: 43 STSINLTIKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLSAFEDLQRITSMGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ +PCA +GTQI+ E+LFYN+ R+
Sbjct: 103 LASMTYVAHVTVTTITKGQLHGYRVSYRDGVMEQEPRPCAAVKGTQIMVENLFYNMAARK 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
K L+ S++Y+KI DVVSR+A+H+ +V F+ +K AD+ T SS + I +YG
Sbjct: 163 KTLQNSSDDYSKIVDVVSRFAIHHTNVSFSCRKHGAVKADVHTVATSSRLDAIRTVYG 220
>gi|340730333|gb|AEK64795.1| Mlh1 [Schmidtea mediterranea]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 216/356 (60%), Gaps = 49/356 (13%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + +IKKLD+ V+N+IAAGE+IQRPANA+KELLENSLDA ST I ++VKQGGL ++QI
Sbjct: 1 MSEIKRIKKLDDNVINKIAAGEIIQRPANAIKELLENSLDANSTQIIISVKQGGLGVIQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG+GI KED I+CE+FTTSKL +F+DL +ISTFGFRGEALAS++HVAH+ I +KT
Sbjct: 61 QDNGSGICKEDFPILCEKFTTSKLQEFQDLLTISTFGFRGEALASVTHVAHVQITSKTID 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQY--- 177
SPCAY+ A+ L+E + + I E+ + + + + +Y
Sbjct: 121 SPCAYK-----AEFSNSKLLEPPKPCAGNTGTIVRVEDLFYNIPIRKASLKSAREEYSKI 175
Query: 178 ----------------------------QPSEKIVERA----CLLEI--ASLNNLELLSV 203
P +IV C++E+ L+ +LL++
Sbjct: 176 IEVVSNYAILNAHKCSITLKKIDDNATSSPDVRIVAETSIEDCVVELFGGELSK-QLLTI 234
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPF 257
+ +D ++G I+ N++ +K F+LFIN + +K+ IE VY LPK ++PF
Sbjct: 235 DLKNDKLDFFLSGRISKPNYNNRKFRFILFINQRLVHCDLLKKSIENVYGNLLPKHAYPF 294
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+L L + KN+DVNVHPTK EVHFLH++ I+ +QS +EK++ S+ SR F TQS
Sbjct: 295 AFLHLQLPSKNIDVNVHPTKFEVHFLHQELIVASIQSFIEKSISSSSESRNFSTQS 350
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 139/189 (73%), Gaps = 4/189 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I ++VKQGGL ++QIQDNG+GI KED I+CE+FTTSKL +F+DL +ISTFGFRGEA
Sbjct: 43 STQIIISVKQGGLGVIQIQDNGSGICKEDFPILCEKFTTSKLQEFQDLLTISTFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS++HVAH+ I +KT SPCAY+A + +SKL +P KPCAGN GT + EDLFYNIP R+
Sbjct: 103 LASVTHVAHVQITSKTIDSPCAYKAEFSNSKLLEPPKPCAGNTGTIVRVEDLFYNIPIRK 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPH-VGFTLKKQNENLA---DIRTNVNSSHSEVIGNI 488
+LK EEY+KI +VVS YA+ N H TLKK ++N D+R +S + + +
Sbjct: 163 ASLKSAREEYSKIIEVVSNYAILNAHKCSITLKKIDDNATSSPDVRIVAETSIEDCVVEL 222
Query: 489 YGNNISRRV 497
+G +S+++
Sbjct: 223 FGGELSKQL 231
>gi|356507690|ref|XP_003522597.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Glycine max]
Length = 727
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 222/375 (59%), Gaps = 42/375 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L E+VVNRIAAGEVIQRP +A+KEL+ENSLDA S+S+ + +K GGLKL+Q+ D
Sbjct: 11 EPPKIQRLSESVVNRIAAGEVIQRPVSAVKELVENSLDAASSSVSLLIKDGGLKLIQVSD 70
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ FEDL I + GFRGEALAS+++VAH+T+ T TK
Sbjct: 71 DGHGIRFEDLPILCERHTTSKLSSFEDLQRIKSMGFRGEALASMTYVAHVTVTTITKPQL 130
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A ++ +Q + +R Q + + V
Sbjct: 131 HGYR-VSYRDGVMEHQPRPCAAVKGTQIMVENLFYNMAARRKTLQNSSDDYSKIVDLVSR 189
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLE-------------LLSVEGTDD-----A 209
+ + + + RA + +A + L+ L+ +E +D+
Sbjct: 190 FAIHHINVSFSCRKHGAVRADVHTVAMSSRLDAIKSVYGVSVARNLIEIEASDNDPSTSV 249
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
F++ G+++N N++ KK+T +LFIN+ +KR IE VY+ LPK S PF+Y+S+
Sbjct: 250 FEMH--GYMSNANYAAKKITMVLFINDRLVECSALKRAIEIVYAATLPKASKPFIYISIV 307
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
+ P+N+DVNVHPTK EV L+++ IIE++QS++E TL SN +R F QS + +
Sbjct: 308 LPPENIDVNVHPTKREVSLLNQEVIIEKIQSVVESTLRSSNEARTFQEQSAGQSSSPRIN 367
Query: 324 GLKLLQIQDNGTGIR 338
K + + TG R
Sbjct: 368 TSKEVNLSPMPTGSR 382
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 131/185 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+S+ + +K GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ FEDL I + GFRGEA
Sbjct: 51 SSSVSLLIKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSSFEDLQRIKSMGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ +PCA +GTQI+ E+LFYN+ RR
Sbjct: 111 LASMTYVAHVTVTTITKPQLHGYRVSYRDGVMEHQPRPCAAVKGTQIMVENLFYNMAARR 170
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ S++Y+KI D+VSR+A+H+ +V F+ +K AD+ T SS + I ++YG +
Sbjct: 171 KTLQNSSDDYSKIVDLVSRFAIHHINVSFSCRKHGAVRADVHTVAMSSRLDAIKSVYGVS 230
Query: 493 ISRRV 497
++R +
Sbjct: 231 VARNL 235
>gi|350539287|ref|NP_001234641.1| MLH1 protein [Solanum lycopersicum]
gi|126238204|gb|ABO07413.1| MLH1 [Solanum lycopersicum]
Length = 730
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 216/363 (59%), Gaps = 48/363 (13%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L+E VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI V VK GGLKL+Q+ D
Sbjct: 13 EPPKIQRLEECVVNRIAAGEVIQRPVSAVKELIENSLDADSTSISVVVKDGGLKLIQVSD 72
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER+TTSKL++FEDL SI + GFRGEALAS+++V H+T+ T T
Sbjct: 73 DGHGIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFRGEALASMTYVGHVTVTTITMGQL 132
Query: 123 CAYRWCTYLADLM-----ALALMEMSQ-------YLQRDKEQIGDKEEKQWYRTVE---- 166
YR TY LM A A ++ +Q Y + + + + V+
Sbjct: 133 HGYR-ATYRDGLMVDEPKACAAVKGTQIMIENLFYNMAARRKTLQNSADDYPKIVDIISR 191
Query: 167 ----HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELL-SVEGTDDAFQL--------- 212
HT V ++ RA + IA+ + L+ + SV G A L
Sbjct: 192 FGIHHTHVSFSCRKHGAG-----RADVHTIATSSRLDAIRSVYGASVARDLMNIEVSDTG 246
Query: 213 ------KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYL 260
K+ G+I+N N+ KK T +LFIN+ +KR IE VY+ LPK S PF+Y+
Sbjct: 247 PLISVFKMDGFISNSNYIAKKTTMVLFINDRLIDCGALKRAIEIVYTATLPKASKPFIYM 306
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
S+ + P++VDVN+HPTK EV FL+++ +IE++QS++ L SN SR F Q+ + +
Sbjct: 307 SIILPPEHVDVNIHPTKREVSFLNQEFVIEKIQSVVGSKLRSSNESRTFQEQTMDLSSSG 366
Query: 321 KQG 323
G
Sbjct: 367 PMG 369
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 129/183 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI V VK GGLKL+Q+ D+G GIR ED+ I+CER+TTSKL++FEDL SI + GFRGEA
Sbjct: 53 STSISVVVKDGGLKLIQVSDDGHGIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T YRA+Y D + D K CA +GTQI+ E+LFYN+ RR
Sbjct: 113 LASMTYVGHVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMAARR 172
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D++SR+ +H+ HV F+ +K AD+ T SS + I ++YG +
Sbjct: 173 KTLQNSADDYPKIVDIISRFGIHHTHVSFSCRKHGAGRADVHTIATSSRLDAIRSVYGAS 232
Query: 493 ISR 495
++R
Sbjct: 233 VAR 235
>gi|346323115|gb|EGX92713.1| DNA mismatch repair protein Mlh1, putative [Cordyceps militaris
CM01]
Length = 731
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 221/405 (54%), Gaps = 51/405 (12%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKELLENS+DA ST+++V VK GGLKLLQI DN
Sbjct: 27 PRRIRALDIDVVNKIAAGEIIVAPVHALKELLENSIDAGSTALEVLVKDGGLKLLQITDN 86
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GI+K+D+ I+CER TTSK+ FEDL +IST+GFRGEALASISH+AHLT+ TKTK S
Sbjct: 87 GSGIQKDDLAILCERHTTSKIVAFEDLTAISTYGFRGEALASISHIAHLTVTTKTKDSAL 146
Query: 124 AYRWCTYLADLMALA----LMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLV 170
A+R YL +A + E R QI ++ ++ +R+ E +
Sbjct: 147 AWR-AHYLDGKLAPSKPGQPAEPKGVAGRPGTQIAVEDLFFSLPTRRRAFRSYADEFNKI 205
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN---------- 220
M +Y V C S +L + + D + G + N
Sbjct: 206 IDMVGRYAIHSAGVGFTCKKAGESSASLSIPAAASAVDRVRQIYGGGVANELVDVLASDA 265
Query: 221 ------------VNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSL 262
N+ KK T +LFIN+ IK+ IEQVYS +LPKG PFVYLSL
Sbjct: 266 RWGYKASALVTNANYHIKKTTLVLFINHRSVESTNIKKAIEQVYSAFLPKGGHPFVYLSL 325
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ-----STSIQ 317
++P VDVNVHPTK EVHFL+ED II+ + + + L +TSR F TQ +
Sbjct: 326 DIEPARVDVNVHPTKKEVHFLNEDEIIQDICNEITDALRAVDTSRTFKTQTLIPGARPAD 385
Query: 318 VTVKQGGLKLLQIQDNGTGIRKEDMDIV----CERFTTSKLTQFE 358
K G + + +G +R+ D+V ER TS + E
Sbjct: 386 HPAKDGEGPVETVLASGKRVRRNSNDLVRTDTFERKITSMFARTE 430
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 136/190 (71%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+++V VK GGLKLLQI DNG+GI+K+D+ I+CER TTSK+ FEDL +IST+GFRGEA
Sbjct: 66 STALEVLVKDGGLKLLQITDNGSGIQKDDLAILCERHTTSKIVAFEDLTAISTYGFRGEA 125
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK S A+RA Y+D KL P KP AG GTQI EDL
Sbjct: 126 LASISHIAHLTVTTKTKDSALAWRAHYLDGKLA-PSKPGQPAEPKGVAGRPGTQIAVEDL 184
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+++PTRR+A + ++E+NKI D+V RYA+H+ VGFT KK E+ A + +S +
Sbjct: 185 FFSLPTRRRAFRSYADEFNKIIDMVGRYAIHSAGVGFTCKKAGESSASLSIPAAASAVDR 244
Query: 485 IGNIYGNNIS 494
+ IYG ++
Sbjct: 245 VRQIYGGGVA 254
>gi|328851685|gb|EGG00837.1| hypothetical protein MELLADRAFT_111529 [Melampsora larici-populina
98AG31]
Length = 724
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 210/348 (60%), Gaps = 40/348 (11%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L+E+VVNRIAAGE+I RP+NA+KELLEN +DA + S+++TVK+GG+K+LQIQDNG+GIRK
Sbjct: 3 LEESVVNRIAAGEIIVRPSNAVKELLENCIDAGAKSVKITVKEGGVKMLQIQDNGSGIRK 62
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWC- 128
ED+ I+CERFTTSK+ F+DL S++T+GFRGEALASISHVAHLT+ TKT+ + ++
Sbjct: 63 EDLAILCERFTTSKIRNFDDLTSLTTYGFRGEALASISHVAHLTVATKTRDANVGWKAQY 122
Query: 129 --TYLADLMALALME-----------------MSQYLQRDKE-QIGDKEEKQWYRTV--- 165
+ LA L +E QR K Q G +E ++ V
Sbjct: 123 SDSRLAPLKVGGPVEPQACAGNDGTVITVEDMFYNVPQRRKALQSGAEEYRKIVDVVSKY 182
Query: 166 ----EHTLVPLMKSQYQ-PSEKIVERACLLE-IASLNNLE----LLSVEGTDDAFQLKVT 215
E + K+ Q P A LE I L + + L+ ++ DD F+ KV
Sbjct: 183 AIHNEGVAISCKKAGSQTPDVNTSATATTLETIGRLYSEQLKKELIRLQFEDDEFECKVD 242
Query: 216 GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
G+ + +++ KK L+FIN+ P+++ +E Y+ LPKG+F F+Y+SL ++P V
Sbjct: 243 GYCSGADYTLKKPVTLIFINHRLVDCSPLRKALEITYTPILPKGAFGFIYISLEIEPSKV 302
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQ 317
D NVHP K EV FL+ED IIE++ L L G N+SR F QS +
Sbjct: 303 DPNVHPNKKEVRFLNEDEIIEKICEKLNSLLAGRNSSRSFQVQSMGFR 350
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ S+++TVK+GG+K+LQIQDNG+GIRKED+ I+CERFTTSK+ F+DL S++T+GFRGEA
Sbjct: 36 AKSVKITVKEGGVKMLQIQDNGSGIRKEDLAILCERFTTSKIRNFDDLTSLTTYGFRGEA 95
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLK-----DPIKP--CAGNQGTQIIAEDLF 425
LASISHVAHLT+ TKT+ + ++A Y DS+L P++P CAGN GT I ED+F
Sbjct: 96 LASISHVAHLTVATKTRDANVGWKAQYSDSRLAPLKVGGPVEPQACAGNDGTVITVEDMF 155
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+P RRKAL+ +EEY KI DVVS+YA+HN V + KK D+ T+ ++ E I
Sbjct: 156 YNVPQRRKALQSGAEEYRKIVDVVSKYAIHNEGVAISCKKAGSQTPDVNTSATATTLETI 215
Query: 486 GNIYGNNISRRVRRF 500
G +Y + + + R
Sbjct: 216 GRLYSEQLKKELIRL 230
>gi|281210065|gb|EFA84233.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 825
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 48/358 (13%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q KI KL V+NRI AGEV+ RP+NALKEL+EN LDA ST I +T+K+GGLKLLQIQD
Sbjct: 12 QAKKIHKLSVDVINRINAGEVVLRPSNALKELIENCLDAHSTIITITLKEGGLKLLQIQD 71
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI+ EDM IVCERFTTSKL++F+DL I+TFGFRGEAL+SISH +HL I+T+T SP
Sbjct: 72 NGCGIKLEDMSIVCERFTTSKLSKFDDLRKITTFGFRGEALSSISHCSHLKILTRTHESP 131
Query: 123 CAYRWCTYLADLMALALMEMSQ------------------YLQRDKEQIGDKEEKQWYRT 164
AYR + L A + ++ Y ++ + + + R
Sbjct: 132 YAYRASYHDGKLHAPTPGQSAEPKPCAGLVGTQITVEDLFYNNPSRKLVIKNPQDEHNRI 191
Query: 165 VE---------HTLVPLMKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDD 208
V+ T+ ++K P+ + L E ++ L EL + +++
Sbjct: 192 VDLIKKYSINNSTVAFIVKKFGDPTPDVHTPGSLTEKEVISILYGNEIGRELKELSLSNN 251
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFIN-----NPIKRMIE---------QVYSIYLPKGS 254
++ GW T+ N+S KK F+LFIN + R++E ++Y YLPKG+
Sbjct: 252 QLDFEMKGWFTSTNYSGKKAVFILFINICVLFESLDRLVESKNLKSGLQRLYEKYLPKGT 311
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
PF+Y+ L ++PKNVDVN PTK EV FL+E+ IIE +Q +++ L S S++F TQ
Sbjct: 312 HPFMYIRLHLNPKNVDVNCSPTKSEVQFLNEEAIIEMIQKLVDVQLNQSINSKLFTTQ 369
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 139/197 (70%), Gaps = 7/197 (3%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
ST I +T+K+GGLKLLQIQDNG GI+ EDM IVCERFTTSKL++F+DL I+TFGFRGE
Sbjct: 51 HSTIITITLKEGGLKLLQIQDNGCGIKLEDMSIVCERFTTSKLSKFDDLRKITTFGFRGE 110
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI-------KPCAGNQGTQIIAEDL 424
AL+SISH +HL I+T+T SP AYRASY D KL P KPCAG GTQI EDL
Sbjct: 111 ALSSISHCSHLKILTRTHESPYAYRASYHDGKLHAPTPGQSAEPKPCAGLVGTQITVEDL 170
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN P+R+ +K P +E+N+I D++ +Y+++N V F +KK + D+ T + + EV
Sbjct: 171 FYNNPSRKLVIKNPQDEHNRIVDLIKKYSINNSTVAFIVKKFGDPTPDVHTPGSLTEKEV 230
Query: 485 IGNIYGNNISRRVRRFS 501
I +YGN I R ++ S
Sbjct: 231 ISILYGNEIGRELKELS 247
>gi|359489136|ref|XP_003633884.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Vitis vinifera]
Length = 381
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 38/347 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I +LD++VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI V VK GGLKL+Q+ D
Sbjct: 29 EPPRIHRLDQSVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVVVKDGGLKLIQVSD 88
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL++FEDL SI + GFRGEALAS+++V H+T+ T T
Sbjct: 89 DGHGIRYEDLPILCERHTTSKLSEFEDLQSIKSMGFRGEALASMTYVGHVTVTTITAGQL 148
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A A ++ +Q + +R Q + + +
Sbjct: 149 HGYR-VSYRDGVMEHEPKACAAVKGTQIMIENLFYNMTARRKTLQNSADDYPKIVDLLSR 207
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLE-------------LLSVEGTDDAFQ--- 211
+ + + + RA + +A+ + L+ L+ +E DD
Sbjct: 208 FAIHHINVNFSCRKHGAARADVHTVATSSRLDAIRSVFGVSVARNLMKIEAADDDVSSSV 267
Query: 212 LKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
++ G+I+N N+ KK T +LFIN+ +KR IE VY+ LPK S PF+Y+S+ +
Sbjct: 268 FEMDGFISNSNYIAKKTTMVLFINDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLP 327
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
++VDVN+HPTK EV L+++ IIE++QS E L SN R F Q
Sbjct: 328 SEHVDVNIHPTKREVSLLNQEAIIEKIQSAFESKLRNSNEERTFQEQ 374
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 132/193 (68%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
STSI V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL++FEDL SI + GFRG
Sbjct: 67 AHSTSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSEFEDLQSIKSMGFRG 126
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++V H+T+ T T YR SY D ++ K CA +GTQI+ E+LFYN+
Sbjct: 127 EALASMTYVGHVTVTTITAGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMIENLFYNMTA 186
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK L+ +++Y KI D++SR+A+H+ +V F+ +K AD+ T SS + I +++G
Sbjct: 187 RRKTLQNSADDYPKIVDLLSRFAIHHINVNFSCRKHGAARADVHTVATSSRLDAIRSVFG 246
Query: 491 NNISRRVRRFSSA 503
+++R + + +A
Sbjct: 247 VSVARNLMKIEAA 259
>gi|297744800|emb|CBI38068.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 38/347 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I +LD++VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI V VK GGLKL+Q+ D
Sbjct: 14 EPPRIHRLDQSVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVVVKDGGLKLIQVSD 73
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL++FEDL SI + GFRGEALAS+++V H+T+ T T
Sbjct: 74 DGHGIRYEDLPILCERHTTSKLSEFEDLQSIKSMGFRGEALASMTYVGHVTVTTITAGQL 133
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A A ++ +Q + +R Q + + +
Sbjct: 134 HGYR-VSYRDGVMEHEPKACAAVKGTQIMIENLFYNMTARRKTLQNSADDYPKIVDLLSR 192
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLE-------------LLSVEGTDDAFQ--- 211
+ + + + RA + +A+ + L+ L+ +E DD
Sbjct: 193 FAIHHINVNFSCRKHGAARADVHTVATSSRLDAIRSVFGVSVARNLMKIEAADDDVSSSV 252
Query: 212 LKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
++ G+I+N N+ KK T +LFIN+ +KR IE VY+ LPK S PF+Y+S+ +
Sbjct: 253 FEMDGFISNSNYIAKKTTMVLFINDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLP 312
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
++VDVN+HPTK EV L+++ IIE++QS E L SN R F Q
Sbjct: 313 SEHVDVNIHPTKREVSLLNQEAIIEKIQSAFESKLRNSNEERTFQEQ 359
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 132/193 (68%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
STSI V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL++FEDL SI + GFRG
Sbjct: 52 AHSTSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSEFEDLQSIKSMGFRG 111
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++V H+T+ T T YR SY D ++ K CA +GTQI+ E+LFYN+
Sbjct: 112 EALASMTYVGHVTVTTITAGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMIENLFYNMTA 171
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK L+ +++Y KI D++SR+A+H+ +V F+ +K AD+ T SS + I +++G
Sbjct: 172 RRKTLQNSADDYPKIVDLLSRFAIHHINVNFSCRKHGAARADVHTVATSSRLDAIRSVFG 231
Query: 491 NNISRRVRRFSSA 503
+++R + + +A
Sbjct: 232 VSVARNLMKIEAA 244
>gi|432108639|gb|ELK33342.1| DNA mismatch repair protein Mlh1 [Myotis davidii]
Length = 281
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 130/155 (83%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ TSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL +IST+GFRG
Sbjct: 42 AKCTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLANISTYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 102 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIST 161
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
RRKALK PSEEY KI +VV RY++HN + F++KK
Sbjct: 162 RRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKK 196
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/120 (81%), Positives = 109/120 (90%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAK TSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKCTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL +IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLANISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
>gi|321259603|ref|XP_003194522.1| MUTL-like protein 1 [Cryptococcus gattii WM276]
gi|317460993|gb|ADV22735.1| MUTL-like protein 1, putative [Cryptococcus gattii WM276]
Length = 765
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 205/359 (57%), Gaps = 54/359 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+KL + V+N+IAA E+I RP+NA+KELLENSLDA STSI+++VK GGLKLLQI DN
Sbjct: 22 PKPIRKLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDN 81
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEALASIS+ +H+ ++TKTK C
Sbjct: 82 GHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKHEGC 141
Query: 124 AYRWCTYLAD------------------------LMALALMEMSQYLQRDKEQIGDKEEK 159
W + D + A L +R + D+ +
Sbjct: 142 G--WKAHYQDGSLIPAKPGGTADPKPAAANDGTVITAADLFYNMPLRKRAFKSTSDEYNR 199
Query: 160 ---------------QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVE 204
W T +P + +Q S K L ++L N ELL +
Sbjct: 200 IIDVVTKYAVHNPHVAWVCKKAGTALPDVATQVGSSTKA--NIAALYTSALAN-ELLEIP 256
Query: 205 GTD---DAFQLKVTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGS 254
T+ K+TGW++N N S +KK +LLFIN N +K+ IE Y+ YLPKG+
Sbjct: 257 NTELQPARLGAKLTGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAIEGHYTSYLPKGA 316
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+VYLSL +DP +DVNVHPTK EV FL+ED I++ V ++ L G+N SR F Q+
Sbjct: 317 SPWVYLSLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVIQAVQTALEGANLSRSFTVQT 375
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 9/185 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+++VK GGLKLLQI DNG GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEA
Sbjct: 61 STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA 120
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS+ +H+ ++TKTK C ++A Y D L DP KP A N GT I A DL
Sbjct: 121 LASISYCSHVEVVTKTKHEGCGWKAHYQDGSLIPAKPGGTADP-KPAAANDGTVITAADL 179
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P R++A K S+EYN+I DVV++YAVHNPHV + KK L D+ T V SS
Sbjct: 180 FYNMPLRKRAFKSTSDEYNRIIDVVTKYAVHNPHVAWVCKKAGTALPDVATQVGSSTKAN 239
Query: 485 IGNIY 489
I +Y
Sbjct: 240 IAALY 244
>gi|302768865|ref|XP_002967852.1| hypothetical protein SELMODRAFT_408722 [Selaginella moellendorffii]
gi|300164590|gb|EFJ31199.1| hypothetical protein SELMODRAFT_408722 [Selaginella moellendorffii]
Length = 696
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 47/364 (12%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M PP+I+KL+E+VVNRIAAGEVIQRPA+ALKELLENSLDA +T + V VK GGLKL+QI
Sbjct: 3 MALPPRIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLIQI 62
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS---ISHVAHLTIIT- 116
DNG GIR ED+ I+CER TTSK+T FEDL +ST GFRGEALAS ++H+ T+
Sbjct: 63 TDNGHGIRYEDLPILCERHTTSKITAFEDLQKVSTLGFRGEALASMTFVAHLTVTTMTEG 122
Query: 117 KTKTSPCAYRWCTYLADLMALALMEMSQYLQRD-------KEQIGDKEEKQWYRTVEHTL 169
+T +Y+ D A ++ +Q + + + + ++ R V+
Sbjct: 123 QTHGYRASYKDGVMEGDPRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVD--- 179
Query: 170 VPLMKSQYQPSEKIVERACLL------------EIASLNNLELLSVEGT----------- 206
+ S+Y V +C +SL + + GT
Sbjct: 180 ---VISKYSIQNPKVGFSCKKFGDARADVQTPGNTSSLEAIRAVYGPGTSRELIEIKTSK 236
Query: 207 -DDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
D + ++ G+I++ N+S K+ T +LFIN+ P+KR IE VY+ LPK S P++Y
Sbjct: 237 NDSSDFFEMNGYISSANYSAKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIY 296
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
+S+ + P++VDVNVHPTK EV FL+++++IE +Q+ +E+ LL SN SR FY Q++
Sbjct: 297 MSIRLPPEHVDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAF 356
Query: 320 VKQG 323
+ QG
Sbjct: 357 LPQG 360
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 141/210 (67%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R S L++ L S +T + V VK GGLKL+QI DNG GIR ED+ I+CE
Sbjct: 25 VIQRPASALKELLENS-----LDAGATVVSVIVKDGGLKLIQITDNGHGIRYEDLPILCE 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSK+T FEDL +ST GFRGEALAS++ VAHLT+ T T+ YRASY D ++
Sbjct: 80 RHTTSKITAFEDLQKVSTLGFRGEALASMTFVAHLTVTTMTEGQTHGYRASYKDGVMEGD 139
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PCA +GTQI+ E+LFYN+ RRK+ K PS+EY ++ DV+S+Y++ NP VGF+ KK
Sbjct: 140 PRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDVISKYSIQNPKVGFSCKKFG 199
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ AD++T N+S E I +YG SR +
Sbjct: 200 DARADVQTPGNTSSLEAIRAVYGPGTSREL 229
>gi|344233509|gb|EGV65381.1| DNA mismatch repair protein MutL [Candida tenuis ATCC 10573]
Length = 725
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 212/369 (57%), Gaps = 69/369 (18%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD VVN+IAAGE++ +PANALKEL+ENS+DA ST I + VK GGLKLLQI DNG
Sbjct: 11 KIRKLDPLVVNKIAAGEIVIQPANALKELVENSIDAHSTMIDILVKDGGLKLLQITDNGD 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK-------- 117
GI KED+ ++CERF TSKL +FEDL SI+TFGFRGEALASISH++ L++IT+
Sbjct: 71 GIEKEDLGLLCERFATSKLAKFEDLESIATFGFRGEALASISHISRLSVITRSKSSTFPL 130
Query: 118 ------------------TKTSPCA---------------YRWCTYLADLMA-----LAL 139
T T P A Y + L+ + + L +
Sbjct: 131 AYKAYYINGKPAGQNFKGTNTEPKAIAGKEGTQLIVEDLFYNLPSRLSSIRSRNDEYLKI 190
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
+++ + + +G +K +H L+ +P + ER ++ A +N
Sbjct: 191 LDVVGKYAVNSDGVGFSLKKHG--DFQHALMT------RPGMPLKERIRMVYGAECSNQL 242
Query: 200 L-LSVEGTD------DAFQL-KVTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQ 244
L L V G D D F + KV G ITN NF+ KKM + FIN +P++R I
Sbjct: 243 LDLEVNGDDTEGQYLDKFGMVKVKGAITNCNFNYRKKMQSIFFINQRLVSCDPLRRAIHS 302
Query: 245 VYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
+YSI+LPKG PFVY+SL + P+ +DVN+HPTK EV FLHE+ IIE + + + K L +
Sbjct: 303 IYSIFLPKGFQPFVYISLELKPEILDVNIHPTKREVRFLHEEEIIEVIVTNVHKLLTSVD 362
Query: 305 TSRVFYTQS 313
TSR F +Q+
Sbjct: 363 TSRTFKSQN 371
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 133/197 (67%), Gaps = 12/197 (6%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
ST I + VK GGLKLLQI DNG GI KED+ ++CERF TSKL +FEDL SI+TFGFRGE
Sbjct: 47 HSTMIDILVKDGGLKLLQITDNGDGIEKEDLGLLCERFATSKLAKFEDLESIATFGFRGE 106
Query: 372 ALASISHVAHLTIITKTKTS--PCAYRASYIDSKLK---------DPIKPCAGNQGTQII 420
ALASISH++ L++IT++K+S P AY+A YI+ K +P K AG +GTQ+I
Sbjct: 107 ALASISHISRLSVITRSKSSTFPLAYKAYYINGKPAGQNFKGTNTEP-KAIAGKEGTQLI 165
Query: 421 AEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
EDLFYN+P+R +++ ++EY KI DVV +YAV++ VGF+LKK + + T
Sbjct: 166 VEDLFYNLPSRLSSIRSRNDEYLKILDVVGKYAVNSDGVGFSLKKHGDFQHALMTRPGMP 225
Query: 481 HSEVIGNIYGNNISRRV 497
E I +YG S ++
Sbjct: 226 LKERIRMVYGAECSNQL 242
>gi|320586224|gb|EFW98903.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 695
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+ LD VVN+IAAGE+I P +ALKEL+EN++DA ST ++V VK GGLKLLQI DNG G
Sbjct: 2 VWALDPDVVNKIAAGEIIIAPVHALKELVENAVDAGSTMLEVLVKDGGLKLLQITDNGCG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ I+CERFTTSKL F+DL SI+T+GFRGEALASISH+AHLT+ T+T+ A+R
Sbjct: 62 IDKGDLPILCERFTTSKLQTFDDLGSIATYGFRGEALASISHIAHLTVTTRTRDDVSAWR 121
Query: 127 WCTYLADLMALAL----MEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPLM 173
C Y A +A E + R QI ++ ++ +R+ EH + M
Sbjct: 122 AC-YEAGRLAPPKPGQDAEPKRVAGRQGTQIAVEDLFYNVPTRRRAFRSAADEHNKIVDM 180
Query: 174 KSQY---------------QPSEKIVERACLLEIASLNNL-------ELLSVEGTDDAFQ 211
+Y + S I A + + ++ ELL+++ D +
Sbjct: 181 LGRYAVHCAGVAFSCKKHGESSASIAVPAVATTVDRIRHVYGGAMAAELLALDTADVRWG 240
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
+ G ++ N S K+ T LLFINN I++ ++ +Y+ +LP+ PFVYLSL +D
Sbjct: 241 FRARGQASSANHSLKRTTLLLFINNRCVESANIRKALDDLYATFLPRHGHPFVYLSLDID 300
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+ VDVNVHPTK EVHFL+ED I V + L +TSR F TQ+
Sbjct: 301 PQRVDVNVHPTKREVHFLNEDEITRAVCDHIASKLADVDTSRTFATQT 348
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 130/190 (68%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST ++V VK GGLKLLQI DNG GI K D+ I+CERFTTSKL F+DL SI+T+GFRGEA
Sbjct: 38 STMLEVLVKDGGLKLLQITDNGCGIDKGDLPILCERFTTSKLQTFDDLGSIATYGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ T+T+ A+RA Y +L P KP AG QGTQI EDL
Sbjct: 98 LASISHIAHLTVTTRTRDDVSAWRACYEAGRLAPP-KPGQDAEPKRVAGRQGTQIAVEDL 156
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + ++E+NKI D++ RYAVH V F+ KK E+ A I ++ +
Sbjct: 157 FYNVPTRRRAFRSAADEHNKIVDMLGRYAVHCAGVAFSCKKHGESSASIAVPAVATTVDR 216
Query: 485 IGNIYGNNIS 494
I ++YG ++
Sbjct: 217 IRHVYGGAMA 226
>gi|405976889|gb|EKC41367.1| DNA mismatch repair protein Mlh1 [Crassostrea gigas]
Length = 182
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 128/140 (91%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+S++IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKL +FEDLNSI+T+GFRGE
Sbjct: 43 KSSNIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLQKFEDLNSIATYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT S CA++ SY+D KLK+P+KPCAGN GTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTTDSKCAFKGSYVDGKLKEPVKPCAGNVGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSR 451
RKALK PSEE++KIA+VVSR
Sbjct: 163 RKALKSPSEEHSKIAEVVSR 182
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/125 (84%), Positives = 116/125 (92%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
QP IK+LDE VVNRIAAGEVIQRPANALKE++ENSLDAKS++IQVTVKQGGLKLLQIQD
Sbjct: 4 QPGTIKRLDEVVVNRIAAGEVIQRPANALKEMIENSLDAKSSNIQVTVKQGGLKLLQIQD 63
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NGTGIRKEDMDIVCERFTTSKL +FEDLNSI+T+GFRGEALASISHVAH+TI TKT S
Sbjct: 64 NGTGIRKEDMDIVCERFTTSKLQKFEDLNSIATYGFRGEALASISHVAHVTITTKTTDSK 123
Query: 123 CAYRW 127
CA++
Sbjct: 124 CAFKG 128
>gi|224146324|ref|XP_002325965.1| predicted protein [Populus trichocarpa]
gi|222862840|gb|EEF00347.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 209/360 (58%), Gaps = 40/360 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI +LDE+VVNRIAAGEVIQRP +A+KEL+ENSLDA STSI V VK GGLKL+Q+ D
Sbjct: 30 EPPKIHRLDESVVNRIAAGEVIQRPVSAIKELVENSLDAHSTSINVVVKDGGLKLIQVSD 89
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT----KT 118
+G GIR+ED+ I+CER TTSKLT +EDL SI + GFRGEALAS+++V H+T+ T K
Sbjct: 90 DGHGIRREDLPILCERHTTSKLTNYEDLQSIKSMGFRGEALASMTYVGHVTVTTITPGKL 149
Query: 119 KTSPCAYRWCTYLADLMALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEHT 168
S +YR + A ++ +Q + +R Q + + +
Sbjct: 150 HGSGVSYRDGVMEDEPKPCAAVKGTQIMVENLFYNMIARRKTFQNSSDDYSKIVDLLSRF 209
Query: 169 LVPLMKSQYQPSEKIVERACLLEIASLNNLE-LLSVEGTDDAFQL--------------- 212
+ + + + RA + + + + L+ + SV G A L
Sbjct: 210 AIHHINVSFSCRKHGASRADVHSVTTSSRLDSIRSVYGVSVALNLMKIEVPDSDPSSSVF 269
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ G I+N N+ KK T +LFIN+ +KR IE VY+ LPK S PF+Y+S+ + P
Sbjct: 270 NMDGLISNSNYVAKKTTMVLFINDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLPP 329
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ----STSIQVTVKQ 322
++VDVNVHPTK EV L+++ II +QS +E L SN +R F Q S S+ ++ K+
Sbjct: 330 EHVDVNVHPTKREVSLLNQEFIINTIQSAVESKLRNSNEARTFQEQTLDSSPSVTLSAKK 389
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 128/184 (69%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
STSI V VK GGLKL+Q+ D+G GIR+ED+ I+CER TTSKLT +EDL SI + GFRG
Sbjct: 68 AHSTSINVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTNYEDLQSIKSMGFRG 127
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++V H+T+ T T SY D ++D KPCA +GTQI+ E+LFYN+
Sbjct: 128 EALASMTYVGHVTVTTITPGKLHGSGVSYRDGVMEDEPKPCAAVKGTQIMVENLFYNMIA 187
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK + S++Y+KI D++SR+A+H+ +V F+ +K + AD+ + SS + I ++YG
Sbjct: 188 RRKTFQNSSDDYSKIVDLLSRFAIHHINVSFSCRKHGASRADVHSVTTSSRLDSIRSVYG 247
Query: 491 NNIS 494
+++
Sbjct: 248 VSVA 251
>gi|167522809|ref|XP_001745742.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776091|gb|EDQ89713.1| predicted protein [Monosiga brevicollis MX1]
Length = 982
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 155/221 (70%), Gaps = 20/221 (9%)
Query: 288 IIER----VQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMD 343
II+R ++ MLE +L STS+ +TVKQGG+K LQIQDNG GI KEDMD
Sbjct: 93 IIQRPANAIKEMLENSLDAG---------STSVTITVKQGGIKFLQIQDNGHGINKEDMD 143
Query: 344 IVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK 403
IVCERFTTSKL+ +EDL +I+T+GFRGEALASISHVAHL+IITKT TSPCAY ASY D K
Sbjct: 144 IVCERFTTSKLSAYEDLQTIATYGFRGEALASISHVAHLSIITKTPTSPCAYSASYRDGK 203
Query: 404 L-----KDPI--KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
+ P KPCAGN GTQI E+LFYN+ RR+ALK ++E N+I DVVSRYA+HN
Sbjct: 204 MVAERPDKPAAPKPCAGNTGTQITVEELFYNVQARRRALKNYNDELNRIVDVVSRYAIHN 263
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
G TLKK E A +RT + S + I +YGN I++ +
Sbjct: 264 SGAGLTLKKFGEATALVRTTASGSTIDNIRAVYGNAIAQEL 304
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 97/106 (91%)
Query: 20 AGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERF 79
A ++IQRPANA+KE+LENSLDA STS+ +TVKQGG+K LQIQDNG GI KEDMDIVCERF
Sbjct: 90 ASQIIQRPANAIKEMLENSLDAGSTSVTITVKQGGIKFLQIQDNGHGINKEDMDIVCERF 149
Query: 80 TTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
TTSKL+ +EDL +I+T+GFRGEALASISHVAHL+IITKT TSPCAY
Sbjct: 150 TTSKLSAYEDLQTIATYGFRGEALASISHVAHLSIITKTPTSPCAY 195
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ ++ D+ K+ G++TN N++TKK T +LFIN+ IK+ I++VYS YLP+
Sbjct: 303 ELIEIKREDNDLNFKLEGYMTNPNYNTKKQTLILFINHRSVRSSTIKKAIDEVYSAYLPR 362
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G F YLSL + P+ VDVNVHPTKHEVHFL+E+ I++ + + + LLGSNTSR F TQ
Sbjct: 363 GMHSFAYLSLLIKPELVDVNVHPTKHEVHFLNEEEIVQSIAVAVSEALLGSNTSRTFQTQ 422
Query: 313 S 313
+
Sbjct: 423 T 423
>gi|260948032|ref|XP_002618313.1| hypothetical protein CLUG_01772 [Clavispora lusitaniae ATCC 42720]
gi|238848185|gb|EEQ37649.1| hypothetical protein CLUG_01772 [Clavispora lusitaniae ATCC 42720]
Length = 711
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 213/360 (59%), Gaps = 54/360 (15%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P IKKLDE V+NRIAAGE+I +PANALKELLENS+DA ST I V VK GGLKLLQI DNG
Sbjct: 2 PTIKKLDENVINRIAAGEIIVQPANALKELLENSVDAGSTMIDVLVKDGGLKLLQITDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI ++DM+++CERF TSK++ F+DL SIST+GFRGEALASISH++ L++++KTK S A
Sbjct: 62 SGIARDDMNLLCERFATSKISTFDDLTSISTYGFRGEALASISHISRLSVVSKTKDSQLA 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQ-IGDKEEKQWYRTVEHTL--VP----LMKSQY 177
Y+ Y+ +A A + + + I K+ Q+ TVE VP MKS+
Sbjct: 122 YK-AYYVNGKLATAKFKADPTGENSAPKPIAGKDGTQF--TVEDLFYNVPSRLRTMKSKS 178
Query: 178 QPSEKIVER-------------ACLLEIASLNNL----------ELLSVEGTDDAFQL-- 212
+ +I++ AC S ++ + +V GT A L
Sbjct: 179 EEWARILDVIGRYAIHTENVGFACKKYGESFPSISTRPQAPLKERIRTVFGTSVASDLIE 238
Query: 213 -----------KVTGWITNVNFSTK-KMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
++ G +T ++ K +M + FINN P+KR I ++ ++LPKG+
Sbjct: 239 FDIKLEEYGLKRLKGAVTGFSYINKRRMNPVFFINNRLVSCDPLKRGISSIFQVFLPKGN 298
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
PFVYLS+ + +N+DVNVHPTK EV FL+ED IIE V L L +TSR F QST
Sbjct: 299 SPFVYLSMDIATQNLDVNVHPTKREVRFLYEDEIIELVCQHLHDVLSTRDTSRSF-KQST 357
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 134/200 (67%), Gaps = 12/200 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I V VK GGLKLLQI DNG+GI ++DM+++CERF TSK++ F+DL SIST+GFRGEA
Sbjct: 40 STMIDVLVKDGGLKLLQITDNGSGIARDDMNLLCERFATSKISTFDDLTSISTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL------KDPI------KPCAGNQGTQII 420
LASISH++ L++++KTK S AY+A Y++ KL DP KP AG GTQ
Sbjct: 100 LASISHISRLSVVSKTKDSQLAYKAYYVNGKLATAKFKADPTGENSAPKPIAGKDGTQFT 159
Query: 421 AEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
EDLFYN+P+R + +K SEE+ +I DV+ RYA+H +VGF KK E+ I T +
Sbjct: 160 VEDLFYNVPSRLRTMKSKSEEWARILDVIGRYAIHTENVGFACKKYGESFPSISTRPQAP 219
Query: 481 HSEVIGNIYGNNISRRVRRF 500
E I ++G +++ + F
Sbjct: 220 LKERIRTVFGTSVASDLIEF 239
>gi|225684413|gb|EEH22697.1| DNA mismatch repair protein mutL [Paracoccidioides brasiliensis
Pb03]
Length = 819
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 196/355 (55%), Gaps = 54/355 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +TSI++ VK GGLKLLQI DNG
Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSIDAGATSIEILVKDGGLKLLQITDNGH 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ T+ A
Sbjct: 92 GIECDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTV-----TTKTAG 146
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSE-- 181
C + A L+ + + + Q TVE +P + ++ S
Sbjct: 147 SSCAWKAHYSDGKLVPAKPGQSAEPKPTAGRGGTQI--TVEDLFYNIPTRRRAFRSSSEE 204
Query: 182 --KIVERACLLEI-----------------------------------ASLNNLELLSVE 204
KI++ C + S EL++
Sbjct: 205 YAKILDVVCRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTVDRIRQIHGSAVASELVTFN 264
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFV 258
D + +GW++N N+ K+ T LLFIN+ ++R IEQ YS +LPKG PF
Sbjct: 265 VEDPGLGFRASGWVSNANYHAKRTTILLFINHRSVESSAVRRAIEQTYSNFLPKGGHPFT 324
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
YL L ++P+ VDVNVHPTK EV+FL+ED I + + +++ L ++SR F Q+
Sbjct: 325 YLDLEIEPQRVDVNVHPTKREVNFLNEDEIFSSICTAIQQQLATVDSSRTFMVQT 379
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 136/197 (69%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 69 ATSIEILVKDGGLKLLQITDNGHGIECDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA++A Y D KL +P KP AG GTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTAGSSCAWKAHYSDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + SEEY KI DVV RYAVH V + KK ++ I T+ NS+ +
Sbjct: 188 FYNIPTRRRAFRSSSEEYAKILDVVCRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTVDR 247
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + F+
Sbjct: 248 IRQIHGSAVASELVTFN 264
>gi|261198298|ref|XP_002625551.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081]
gi|239595514|gb|EEQ78095.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081]
Length = 842
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 200/357 (56%), Gaps = 58/357 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +TS+++ VK GGLKLLQI DNG
Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ T+ A
Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTV-----TTKTAG 146
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSEKI 183
C + A L+ + + + Q TVE VP + ++ S +
Sbjct: 147 SSCAWKAHYSDGKLVPAKPGQTAEPKPTAGRGGTQI--TVEDLFYNVPTRRRAFRSSSE- 203
Query: 184 VERACLLEIA--------------------------SLNNL---------------ELLS 202
E A +L++ S+N+ EL++
Sbjct: 204 -EYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDRIRQIHGSAVASELVN 262
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP 256
D + +GW +N N+ K+ T LLFIN+ ++R IEQ YS +LPKG P
Sbjct: 263 FSVEDPRLGFRASGWASNANYHAKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHP 322
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
F YL L ++P+ VDVNVHPTK EV+FL+ED II + + +++ L ++SR F Q+
Sbjct: 323 FAYLDLEIEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVDSSRTFMVQT 379
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 138/197 (70%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 69 ATSVEILVKDGGLKLLQITDNGHGIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA++A Y D KL +P KP AG GTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTAGSSCAWKAHYSDGKLVPAKPGQTAEP-KPTAGRGGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI DVV RYAVH V F+ KK ++ I T++NS+ +
Sbjct: 188 FYNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDR 247
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + FS
Sbjct: 248 IRQIHGSAVASELVNFS 264
>gi|327355802|gb|EGE84659.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 842
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 200/357 (56%), Gaps = 58/357 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +TS+++ VK GGLKLLQI DNG
Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ T+ A
Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTV-----TTKTAG 146
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSEKI 183
C + A L+ + + + Q TVE VP + ++ S +
Sbjct: 147 SSCAWKAHYSDGKLVPAKPGQTAEPKPTAGRGGTQI--TVEDLFYNVPTRRRAFRSSSE- 203
Query: 184 VERACLLEIA--------------------------SLNNL---------------ELLS 202
E A +L++ S+N+ EL++
Sbjct: 204 -EYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDRIRQIHGSAVASELVN 262
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP 256
D + +GW +N N+ K+ T LLFIN+ ++R IEQ YS +LPKG P
Sbjct: 263 FSVEDPRLGFRASGWASNANYHAKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHP 322
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
F YL L ++P+ VDVNVHPTK EV+FL+ED II + + +++ L ++SR F Q+
Sbjct: 323 FAYLDLEIEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVDSSRTFMVQT 379
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 138/197 (70%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 69 ATSVEILVKDGGLKLLQITDNGHGIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA++A Y D KL +P KP AG GTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTAGSSCAWKAHYSDGKLVPAKPGQTAEP-KPTAGRGGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI DVV RYAVH V F+ KK ++ I T++NS+ +
Sbjct: 188 FYNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDR 247
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + FS
Sbjct: 248 IRQIHGSAVASELVNFS 264
>gi|239607860|gb|EEQ84847.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3]
Length = 842
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 200/357 (56%), Gaps = 58/357 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +TS+++ VK GGLKLLQI DNG
Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ T+ A
Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTV-----TTKTAG 146
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSEKI 183
C + A L+ + + + Q TVE VP + ++ S +
Sbjct: 147 SSCAWKAHYSDGKLVPAKPGQTAEPKPTAGRGGTQI--TVEDLFYNVPTRRRAFRSSSE- 203
Query: 184 VERACLLEIA--------------------------SLNNL---------------ELLS 202
E A +L++ S+N+ EL++
Sbjct: 204 -EYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDRIRQIHGSAVASELVN 262
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP 256
D + +GW +N N+ K+ T LLFIN+ ++R IEQ YS +LPKG P
Sbjct: 263 FSVEDPRLGFRASGWASNANYHAKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHP 322
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
F YL L ++P+ VDVNVHPTK EV+FL+ED II + + +++ L ++SR F Q+
Sbjct: 323 FAYLDLEIEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVDSSRTFMVQT 379
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 138/197 (70%), Gaps = 9/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 69 ATSVEILVKDGGLKLLQITDNGHGIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA++A Y D KL +P KP AG GTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTAGSSCAWKAHYSDGKLVPAKPGQTAEP-KPTAGRGGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI DVV RYAVH V F+ KK ++ I T++NS+ +
Sbjct: 188 FYNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSMNSTTVDR 247
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G+ ++ + FS
Sbjct: 248 IRQIHGSAVASELVNFS 264
>gi|219963259|gb|ACL68184.1| MutL-like protein [Sordaria macrospora]
Length = 748
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 203/355 (57%), Gaps = 50/355 (14%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DN
Sbjct: 28 PRRIRALDPDVVNKIAAGEIIIAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDN 87
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEALASISHVAHLT+ TKT+ S C
Sbjct: 88 GYGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHVAHLTVTTKTQESNC 147
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTV--E 166
A+R A + L+ D + + ++ ++ +R+ E
Sbjct: 148 AWR-----AHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDE 202
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN--VNFS 224
+ + M +Y V +C S ++ + + + D + G + N + +S
Sbjct: 203 YNKIIDMVGRYAVHCSHVAFSCKKHGESSTSITIQATASSTDRIRQIYGGSVANELIEYS 262
Query: 225 T--------------------KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFV 258
T KK T LLFIN+ I++ +EQ Y+ +LPK PFV
Sbjct: 263 TSDDRWGFKAMGLATNANYNLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFV 322
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
YLSL + P+ VDVNVHPTK EV+FL+E II+ + + L +TSR F TQ+
Sbjct: 323 YLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQT 377
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 142/199 (71%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEA
Sbjct: 67 STSLEIVVKDGGLKLLQITDNGYGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 127 LASISHVAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 185
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I +S ++
Sbjct: 186 FYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKHGESSTSITIQATASSTDR 245
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG +++ + +S++
Sbjct: 246 IRQIYGGSVANELIEYSTS 264
>gi|336270522|ref|XP_003350020.1| MLH1 protein [Sordaria macrospora k-hell]
gi|380095411|emb|CCC06884.1| putative MLH1 protein [Sordaria macrospora k-hell]
Length = 752
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 203/355 (57%), Gaps = 50/355 (14%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DN
Sbjct: 32 PRRIRALDPDVVNKIAAGEIIIAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDN 91
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEALASISHVAHLT+ TKT+ S C
Sbjct: 92 GYGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHVAHLTVTTKTQESNC 151
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTV--E 166
A+R A + L+ D + + ++ ++ +R+ E
Sbjct: 152 AWR-----AHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDE 206
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN--VNFS 224
+ + M +Y V +C S ++ + + + D + G + N + +S
Sbjct: 207 YNKIIDMVGRYAVHCSHVAFSCKKHGESSTSITIQATASSTDRIRQIYGGSVANELIEYS 266
Query: 225 T--------------------KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFV 258
T KK T LLFIN+ I++ +EQ Y+ +LPK PFV
Sbjct: 267 TSDDRWGFKAMGLATNANYNLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFV 326
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
YLSL + P+ VDVNVHPTK EV+FL+E II+ + + L +TSR F TQ+
Sbjct: 327 YLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQT 381
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 142/199 (71%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEA
Sbjct: 71 STSLEIVVKDGGLKLLQITDNGYGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEA 130
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 131 LASISHVAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 189
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I +S ++
Sbjct: 190 FYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKHGESSTSITIQATASSTDR 249
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG +++ + +S++
Sbjct: 250 IRQIYGGSVANELIEYSTS 268
>gi|336470951|gb|EGO59112.1| hypothetical protein NEUTE1DRAFT_78866 [Neurospora tetrasperma FGSC
2508]
gi|350292023|gb|EGZ73218.1| DNA mismatch repair protein MutL [Neurospora tetrasperma FGSC 2509]
Length = 751
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 203/355 (57%), Gaps = 50/355 (14%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DN
Sbjct: 28 PRRIRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDN 87
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEALASISH+AHLT+ TKT+ S C
Sbjct: 88 GCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHIAHLTVTTKTQESNC 147
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTV--E 166
A+R A + L+ D + + ++ ++ +R+ E
Sbjct: 148 AWR-----AHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDE 202
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN--VNFS 224
+ + M +Y V +C S ++ + + + D + G + N + +S
Sbjct: 203 YNKIIDMVGRYAVHCSHVAFSCKKHGESSTSIAIQASASSTDRIRQIYGGSVANELIEYS 262
Query: 225 T--------------------KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFV 258
T KK T LLFIN+ I++ +EQ Y+ +LPK PFV
Sbjct: 263 TSDDRWGFKAEGLATNANYSLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFV 322
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
YLSL + P+ VDVNVHPTK EV+FL+E II+ + + L +TSR F TQ+
Sbjct: 323 YLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQT 377
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 143/199 (71%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEA
Sbjct: 67 STSLEIVVKDGGLKLLQITDNGCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 127 LASISHIAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 185
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I ++S ++
Sbjct: 186 FYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKHGESSTSIAIQASASSTDR 245
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG +++ + +S++
Sbjct: 246 IRQIYGGSVANELIEYSTS 264
>gi|115442355|ref|NP_001045457.1| Os01g0958900 [Oryza sativa Japonica Group]
gi|57900283|dbj|BAD87116.1| putative MutL homolog 1 protein [Oryza sativa Japonica Group]
gi|113534988|dbj|BAF07371.1| Os01g0958900 [Oryza sativa Japonica Group]
gi|215737085|dbj|BAG96014.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 724
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 219/351 (62%), Gaps = 38/351 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++S+ V VK GGLKL+Q+ D
Sbjct: 14 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSD 73
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T+
Sbjct: 74 DGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 133
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A ++ +Q + ++ Q + + + +
Sbjct: 134 HGYR-VSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISR 192
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELL-SVEGTD---DAFQLKVT-------- 215
V + + + RA + ++ + L+ + SV G D ++KV+
Sbjct: 193 FAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIEIKVSYEDAADSI 252
Query: 216 ----GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
G+I+N N+ KK+T +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 253 FKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLP 312
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI 316
++VDVN+HPTK EV L+++ IIE +++ +E+ L+ SNT+R+F TQ+ ++
Sbjct: 313 SEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNL 363
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 129/183 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++S+ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 54 ASSVSVAVKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEA 113
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQ++ E+LFYN+ R+
Sbjct: 114 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARK 173
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I ++YG +
Sbjct: 174 KTLQNSNDDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGAS 233
Query: 493 ISR 495
+ R
Sbjct: 234 VVR 236
>gi|218189774|gb|EEC72201.1| hypothetical protein OsI_05282 [Oryza sativa Indica Group]
Length = 1224
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 219/351 (62%), Gaps = 38/351 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++S+ V VK GGLKL+Q+ D
Sbjct: 14 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSD 73
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T+
Sbjct: 74 DGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 133
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A ++ +Q + ++ Q + + + +
Sbjct: 134 HGYR-VSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISR 192
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELL-SVEGTD---DAFQLKVT-------- 215
V + + + RA + ++ + L+ + SV G D ++KV+
Sbjct: 193 FAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIEIKVSYEDAADSI 252
Query: 216 ----GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
G+I+N N+ KK+T +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 253 FKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLP 312
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI 316
++VDVN+HPTK EV L+++ IIE +++ +E+ L+ SNT+R+F TQ+ ++
Sbjct: 313 SEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNL 363
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 129/183 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++S+ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 54 ASSVSVAVKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEA 113
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQ++ E+LFYN+ R+
Sbjct: 114 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARK 173
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I ++YG +
Sbjct: 174 KTLQNSNDDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGAS 233
Query: 493 ISR 495
+ R
Sbjct: 234 VVR 236
>gi|405971825|gb|EKC36635.1| DNA mismatch repair protein Mlh1 [Crassostrea gigas]
Length = 154
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/154 (72%), Positives = 131/154 (85%)
Query: 342 MDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYID 401
MDIVCERFTTSKL +FEDLNSI+T+GFRGEALASISHVAH+TI TKT S CA++ SY+D
Sbjct: 1 MDIVCERFTTSKLQKFEDLNSIATYGFRGEALASISHVAHVTITTKTADSKCAFKGSYVD 60
Query: 402 SKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGF 461
KLK+P+KPCAGN GTQI EDLFYNI TRRKALK PSEE++KIA+VVSRYAVHN +VGF
Sbjct: 61 GKLKEPVKPCAGNVGTQITVEDLFYNISTRRKALKSPSEEHSKIAEVVSRYAVHNCNVGF 120
Query: 462 TLKKQNENLADIRTNVNSSHSEVIGNIYGNNISR 495
TLKKQ +N AD+RT SSH + I IYG +I++
Sbjct: 121 TLKKQGDNTADVRTAAKSSHVDNIRTIYGPSIAK 154
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 72 MDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
MDIVCERFTTSKL +FEDLNSI+T+GFRGEALASISHVAH+TI TKT S CA++
Sbjct: 1 MDIVCERFTTSKLQKFEDLNSIATYGFRGEALASISHVAHVTITTKTADSKCAFK 55
>gi|297813357|ref|XP_002874562.1| hypothetical protein ARALYDRAFT_911184 [Arabidopsis lyrata subsp.
lyrata]
gi|297320399|gb|EFH50821.1| hypothetical protein ARALYDRAFT_911184 [Arabidopsis lyrata subsp.
lyrata]
Length = 727
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 210/356 (58%), Gaps = 46/356 (12%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA S+SI V VK GGLKL+Q+ D
Sbjct: 15 EPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSD 74
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR+ED+ I+CER TTSKLT++EDL S+S+ GFRGEALAS+++VAH+T+ T TK
Sbjct: 75 DGHGIRREDLPILCERHTTSKLTKYEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 134
Query: 123 CAYRWCTYLADLM-----ALALMEMSQY---------------LQRDKEQIGDKEEKQWY 162
YR +Y +M A A ++ +Q LQ + G +
Sbjct: 135 HGYR-VSYRDGVMEHEPKACAAVKGTQIMVENLFYNMTARRKTLQNSADDYGKIVDLLSR 193
Query: 163 RTVEHTLVPL-----------MKSQYQPSEKIVERACLLEIASLNNLELLSVEGTD-DAF 210
+ H V + S PS R+ + ++ NL + V D
Sbjct: 194 MAIHHNNVSFSCRKHGAVKADVHSVMSPSRLDSIRS-VYGVSVAKNLMKVEVSSCDPSGC 252
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+ G+I+N N+ +KK +LFIN+ +KR IE VY+ LPK S PFVY+S+ +
Sbjct: 253 TFDMEGFISNSNYVSKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINL 312
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF------YTQST 314
++VD+N+HPTK EV L+++ IIE +QS +E L +N +R F Y QST
Sbjct: 313 PREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQKVEYIQST 368
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 136/192 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI V VK GGLKL+Q+ D+G GIR+ED+ I+CER TTSKLT++EDL S+S+ GFRGEA
Sbjct: 55 SSSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKYEDLFSLSSMGFRGEA 114
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ K CA +GTQI+ E+LFYN+ RR
Sbjct: 115 LASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMTARR 174
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D++SR A+H+ +V F+ +K AD+ + ++ S + I ++YG +
Sbjct: 175 KTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVMSPSRLDSIRSVYGVS 234
Query: 493 ISRRVRRFSSAS 504
+++ + + +S
Sbjct: 235 VAKNLMKVEVSS 246
>gi|198427900|ref|XP_002122535.1| PREDICTED: similar to mutL homolog 1, colon cancer, nonpolyposis
type 2 [Ciona intestinalis]
Length = 697
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I V++K GGLK+LQI DNG GIR+EDM+IVCERFTTSKL +F+DL +I+TFGFRGEA
Sbjct: 45 STTITVSLKSGGLKMLQISDNGHGIRREDMEIVCERFTTSKLKEFDDLKTIATFGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVAHL+I ++TK S C Y+ASY+D ++K +P AGN GTQI EDLFYN+PTRR
Sbjct: 105 LASISHVAHLSITSRTKDSKCGYKASYLDGRIKGSPRPTAGNTGTQITVEDLFYNVPTRR 164
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLA-----DIRTNVNSSHSEVIGN 487
KA K PSEE+ KIADV++RYA+HN FTL+K + + +RT + SS IG
Sbjct: 165 KAFKSPSEEHQKIADVMTRYALHNSGKSFTLRKTDGDSGPSGGVSVRTQLGSSFVTNIGT 224
Query: 488 IYGNNISRRV 497
++G+ +++ V
Sbjct: 225 LFGSKVAKEV 234
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 111/125 (88%), Gaps = 1/125 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDETVVNRIAAGEVIQRPANA+KE++EN LDA ST+I V++K GGLK+LQI DNG G
Sbjct: 9 IKRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAGSTTITVSLKSGGLKMLQISDNGHG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IR+EDM+IVCERFTTSKL +F+DL +I+TFGFRGEALASISHVAHL+I ++TK S C Y+
Sbjct: 69 IRREDMEIVCERFTTSKLKEFDDLKTIATFGFRGEALASISHVAHLSITSRTKDSKCGYK 128
Query: 127 WCTYL 131
+YL
Sbjct: 129 -ASYL 132
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPK 252
E++ V+ D QLK G+I+N N S KK FLLFINN + K+ ++ VY YLPK
Sbjct: 233 EVIEVKHYDTQLQLKTFGYISNANCSMKKFVFLLFINNRLVDCSVLKKSLDSVYQSYLPK 292
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
GS PFVYLSL M N+DVNVHPTKHEVHFLHED ++ VQ +E +LL ++SR FY Q
Sbjct: 293 GSHPFVYLSLEMPTNNLDVNVHPTKHEVHFLHEDEVVTSVQKQVEASLLSCDSSRTFYMQ 352
>gi|440470845|gb|ELQ39891.1| DNA mismatch repair protein mutL, partial [Magnaporthe oryzae Y34]
Length = 762
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 202/348 (58%), Gaps = 40/348 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK L + VVN+IAAGE+I P +ALKEL+EN++DA STS++V + GGLK+LQI DNG
Sbjct: 31 RIKALSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLCRDGGLKMLQITDNGC 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASIS++AHLT+ TKTK S CA+
Sbjct: 91 GIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISYIAHLTVTTKTKDSSCAW 150
Query: 126 RW---CTYLADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVPLM 173
R LA + R QI ++ ++ +R+ E+ + M
Sbjct: 151 RAYYEGGKLAPTKPGQPADPKPVAGRQGTQITVEDLFYNVPSRRRAFRSFSDEYNKIIDM 210
Query: 174 KSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN--VNFST------ 225
+Y K V +C S ++ + + D + + N ++FST
Sbjct: 211 VGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDRIRQIYGSSVANELIDFSTSDTRWG 270
Query: 226 --------------KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
KK T LLFINN +K+ +EQ Y+ +LPK PF+YLSL +D
Sbjct: 271 FKASGWCTNANHSVKKTTLLLFINNRCVESTNVKKSLEQTYAAFLPKNGHPFLYLSLEID 330
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+ VDVNVHPTK EV+FL+E+ II+ + L L +TSR F TQ+
Sbjct: 331 PQRVDVNVHPTKREVNFLNENEIIQAICENLRTRLAAVDTSRTFRTQT 378
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 141/199 (70%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V + GGLK+LQI DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 68 STSLEVLCRDGGLKMLQITDNGCGIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS++AHLT+ TKTK S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 128 LASISYIAHLTVTTKTKDSSCAWRAYYEGGKLAPTKPGQPADP-KPVAGRQGTQITVEDL 186
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P+RR+A + S+EYNKI D+V RYAVH V F+ KK E+ I ++ S+
Sbjct: 187 FYNVPSRRRAFRSFSDEYNKIIDMVGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDR 246
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG++++ + FS++
Sbjct: 247 IRQIYGSSVANELIDFSTS 265
>gi|440480852|gb|ELQ61492.1| DNA mismatch repair protein mutL [Magnaporthe oryzae P131]
Length = 771
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 202/350 (57%), Gaps = 44/350 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK L + VVN+IAAGE+I P +ALKEL+EN++DA STS++V + GGLK+LQI DNG
Sbjct: 31 RIKALSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLCRDGGLKMLQITDNGC 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASIS++AHLT+ TKTK S CA
Sbjct: 91 GIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISYIAHLTVTTKTKDSSCA- 149
Query: 126 RWCTY-----LADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRTV--EHTLVP 171
W Y LA + R QI ++ ++ +R+ E+ +
Sbjct: 150 -WRAYYEGGKLAPTKPGQPADPKPVAGRQGTQITVEDLFYNVPSRRRAFRSFSDEYNKII 208
Query: 172 LMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN--VNFST---- 225
M +Y K V +C S ++ + + D + + N ++FST
Sbjct: 209 DMVGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDRIRQIYGSSVANELIDFSTSDTR 268
Query: 226 ----------------KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLC 263
KK T LLFINN +K+ +EQ Y+ +LPK PF+YLSL
Sbjct: 269 WGFKASGWCTNANHSVKKTTLLLFINNRCVESTNVKKSLEQTYAAFLPKNGHPFLYLSLE 328
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP+ VDVNVHPTK EV+FL+E+ II+ + L L +TSR F TQ+
Sbjct: 329 IDPQRVDVNVHPTKREVNFLNENEIIQAICENLRTRLAAVDTSRTFRTQT 378
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 141/199 (70%), Gaps = 9/199 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V + GGLK+LQI DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 68 STSLEVLCRDGGLKMLQITDNGCGIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS++AHLT+ TKTK S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 128 LASISYIAHLTVTTKTKDSSCAWRAYYEGGKLAPTKPGQPADP-KPVAGRQGTQITVEDL 186
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P+RR+A + S+EYNKI D+V RYAVH V F+ KK E+ I ++ S+
Sbjct: 187 FYNVPSRRRAFRSFSDEYNKIIDMVGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDR 246
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG++++ + FS++
Sbjct: 247 IRQIYGSSVANELIDFSTS 265
>gi|242055637|ref|XP_002456964.1| hypothetical protein SORBIDRAFT_03g046470 [Sorghum bicolor]
gi|241928939|gb|EES02084.1| hypothetical protein SORBIDRAFT_03g046470 [Sorghum bicolor]
Length = 721
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 214/349 (61%), Gaps = 38/349 (10%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++++ VTVK GGLKL+Q+ D+
Sbjct: 14 PPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTVSVTVKDGGLKLIQVSDD 73
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK---- 119
G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T+
Sbjct: 74 GHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLH 133
Query: 120 --------------TSPCA-YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
PCA + + + + ++ + LQ + +
Sbjct: 134 GYRVCYKDGVMENEPKPCAAVKGTQVMVENLFYNMVARRKTLQNSNDDYPKVVDFISRFA 193
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNL-------ELLSVEGTD----DAFQL 212
V H V ++ + V + + ++ N+ +L+ +E +D DA
Sbjct: 194 VHHINVNFSCRKHGANRADVHSSSTSSRLDAIRNVYGASVVRDLIEIEVSDEDAGDAV-F 252
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G+I+N N+ KK+T +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 253 KMDGYISNANYVAKKITMILFINDRLVDCTSLKRAIEFVYSATLPQASKPFIYMSINLPS 312
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
++VDVN+HPTK EV L+++ IIE +++ +E+ L SNT+R+F TQ+ +
Sbjct: 313 EHVDVNIHPTKKEVSLLNQERIIETIKNTIEEKLRNSNTTRIFQTQAVN 361
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 134/195 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++++ VTVK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 53 ASTVSVTVKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR Y D +++ KPCA +GTQ++ E+LFYN+ RR
Sbjct: 113 LASMTYVGHVTVTTITEGQLHGYRVCYKDGVMENEPKPCAAVKGTQVMVENLFYNMVARR 172
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y K+ D +SR+AVH+ +V F+ +K N AD+ ++ SS + I N+YG +
Sbjct: 173 KTLQNSNDDYPKVVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDAIRNVYGAS 232
Query: 493 ISRRVRRFSSASQSA 507
+ R + + + A
Sbjct: 233 VVRDLIEIEVSDEDA 247
>gi|366992540|ref|XP_003676035.1| hypothetical protein NCAS_0D00900 [Naumovozyma castellii CBS 4309]
gi|342301901|emb|CCC69671.1| hypothetical protein NCAS_0D00900 [Naumovozyma castellii CBS 4309]
Length = 775
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 201/347 (57%), Gaps = 42/347 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LD +VVN+IAAGE+I P NALKE++ENS+DAK+T+I + K+GG+K+LQI DNG+
Sbjct: 4 KIKALDASVVNKIAAGEIIISPMNALKEMMENSIDAKATTIDILAKEGGIKILQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC-- 123
GI KED+ I+CERFTTSKL F+DL +I T+GFRGEALASISH+A +T+ TKTK C
Sbjct: 64 GIDKEDLPILCERFTTSKLKSFDDLQNIQTYGFRGEALASISHIARVTVTTKTKNDKCAW 123
Query: 124 --AYRWCTYLADLMALALMEMSQYLQRD----------KEQIGDKEEKQWYRTV------ 165
+Y + + +A + + L D + G++E + V
Sbjct: 124 KVSYSEGKMIDEPKPIAGKDGTSILVEDLFYNVPSRLRALRAGNEEYNKILDVVGRYAIH 183
Query: 166 ------------EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
E ++SQ+ ++I + NL ++ + +
Sbjct: 184 SKGIAFSCKKFGESNFNLTIQSQFSIEDRI---RTIFNNQVATNLIPFHIDTIKELNIIS 240
Query: 214 VTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
VTG ++N+NFS KK + L FINN P+KR + YS ++ KG+ PF+YLS+ + P
Sbjct: 241 VTGRVSNLNFSYKKTIQPLFFINNRLITCEPLKRALRNTYSNFMTKGNKPFIYLSILIHP 300
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VDVNVHPTK EV FL++D I+E++ L + L +TSR F T +
Sbjct: 301 NAVDVNVHPTKREVRFLNQDAILEKIALQLHEELSNIDTSRTFKTAT 347
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 133/189 (70%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+I + K+GG+K+LQI DNG+GI KED+ I+CERFTTSKL F+DL +I T+GFRGE
Sbjct: 40 KATTIDILAKEGGIKILQITDNGSGIDKEDLPILCERFTTSKLKSFDDLQNIQTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH+A +T+ TKTK CA++ SY + K+ D KP AG GT I+ EDLFYN+P+R
Sbjct: 100 ALASISHIARVTVTTKTKNDKCAWKVSYSEGKMIDEPKPIAGKDGTSILVEDLFYNVPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
+AL+ +EEYNKI DVV RYA+H+ + F+ KK E+ ++ S + I I+ N
Sbjct: 160 LRALRAGNEEYNKILDVVGRYAIHSKGIAFSCKKFGESNFNLTIQSQFSIEDRIRTIFNN 219
Query: 492 NISRRVRRF 500
++ + F
Sbjct: 220 QVATNLIPF 228
>gi|326503044|dbj|BAJ99147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 209/347 (60%), Gaps = 36/347 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENS+DA S++I VTVK GGLKL+Q+ D
Sbjct: 12 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSIDAGSSTISVTVKDGGLKLIQVSD 71
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI-------- 114
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+
Sbjct: 72 DGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 131
Query: 115 ----------ITKTKTSPCA-YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYR 163
+ + PCA + + + + ++ + LQ + +
Sbjct: 132 HGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRF 191
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNL-------ELLSVEGTDDAFQ---L 212
V H V ++ + V + ++ N+ +L+ ++ +D+
Sbjct: 192 AVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGASVVRDLMEIQVSDENAVDEIF 251
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G+I+N N+ KK T +LFIN+ +KR E VYS LP+ S PF+Y+S+ + P
Sbjct: 252 KMDGFISNANYVAKKTTMILFINDRLVDCTSLKRATEFVYSAILPQASKPFIYMSINLPP 311
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
++VDVN+HPTK EV L+++ IIE+++ +EK L+ N +R+F TQ+
Sbjct: 312 EHVDVNIHPTKKEVSLLNQERIIEKIKDAIEKKLVNCNNTRIFQTQA 358
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 136/196 (69%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S++I VTVK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 52 SSTISVTVKDGGLKLIQVSDDGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 111
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQI+ E+LFYN+ RR
Sbjct: 112 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARR 171
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I N+YG +
Sbjct: 172 KTLQNSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGAS 231
Query: 493 ISRRVRRFSSASQSAL 508
+ R + + ++A+
Sbjct: 232 VVRDLMEIQVSDENAV 247
>gi|340960299|gb|EGS21480.1| putative DNA mismatch repair protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 732
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 145/198 (73%), Gaps = 9/198 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK+GGLKLLQI DNG GI KED+ I+CERFTTSKL +FEDL +IST+GFRGEA
Sbjct: 70 STSLEILVKEGGLKLLQITDNGCGIDKEDLPILCERFTTSKLQKFEDLQTISTYGFRGEA 129
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH++HLT+ TKT+ SP A+RA Y KL DP KP AG QGTQI EDL
Sbjct: 130 LASISHISHLTVTTKTRHSPTAWRAYYEGGKLVPAKPGQSPDP-KPTAGRQGTQITVEDL 188
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + PS+EYNKI D+V RYA+H HV F+ KK E+ A I +SS +
Sbjct: 189 FYNVPTRRRAFRSPSDEYNKIIDMVGRYAIHCSHVAFSCKKHGESCASIAVQADSSRIDR 248
Query: 485 IGNIYGNNISRRVRRFSS 502
I IYG++++ + FS+
Sbjct: 249 IRQIYGSSVANELTEFST 266
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 106/123 (86%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD+ VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK+GGLKLLQI DN
Sbjct: 31 PRRIKALDQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEILVKEGGLKLLQITDN 90
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KED+ I+CERFTTSKL +FEDL +IST+GFRGEALASISH++HLT+ TKT+ SP
Sbjct: 91 GCGIDKEDLPILCERFTTSKLQKFEDLQTISTYGFRGEALASISHISHLTVTTKTRHSPT 150
Query: 124 AYR 126
A+R
Sbjct: 151 AWR 153
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPK 252
EL DD + K +G+ TN N+STKK T LLFINN IK+ IEQ YS +LPK
Sbjct: 260 ELTEFSTFDDRWGFKASGYATNANYSTKKTTLLLFINNRCVESSNIKKAIEQTYSSFLPK 319
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
PFVYLSL +DP+ VDVNVHPTK EV+FL+ED II+ + L + L + SR F TQ
Sbjct: 320 NGHPFVYLSLEIDPRRVDVNVHPTKREVNFLNEDEIIQAICENLREKLASVDASRTFVTQ 379
Query: 313 S 313
S
Sbjct: 380 S 380
>gi|45198322|ref|NP_985351.1| AFL199Cp [Ashbya gossypii ATCC 10895]
gi|44984209|gb|AAS53175.1| AFL199Cp [Ashbya gossypii ATCC 10895]
gi|374108579|gb|AEY97485.1| FAFL199Cp [Ashbya gossypii FDAG1]
Length = 771
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 199/356 (55%), Gaps = 58/356 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +IK L+ +VVN+IAAGE+I P NALKE++ENS+DA +T++ + VK GG+K+LQI
Sbjct: 43 MHLPSRIKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQI 102
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K+D+ I+CERFTTSKL FEDL+ I T+GFRGEALASISH+A L ++TKTK
Sbjct: 103 SDNGCGIMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEALASISHIARLHVVTKTKE 162
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS 180
+ CA++ A+ E + K G + + + + +++ PS
Sbjct: 163 NQCAWK-----------AVYENGVMVGEPKPTAGKDGTTILVQDLFYNVPSRLRALRSPS 211
Query: 181 E---KIVERACLLEIASLN----------NLELLSVEGTDD-------AFQLKVTGWITN 220
E KIV+ I S L+V GT F V +
Sbjct: 212 EEFAKIVDVVGKYAIHSDGVGFSCKKFGETQYALNVRGTSSKSDKIRAVFGAPVVANLVE 271
Query: 221 VNFST---------------------KKMTFLLFINN------PIKRMIEQVYSIYLPKG 253
V+ S K + + FINN P++R + QVYS +LPKG
Sbjct: 272 VDISADPEHGLTSSSGQITTPDFNNKKSIPAVFFINNRLVSCDPLRRALSQVYSNFLPKG 331
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
+ PF+Y+SL + P+NVDVNVHPTK EV FL+E+ +IER+ ++L + L +TSR F
Sbjct: 332 NKPFIYMSLHITPENVDVNVHPTKREVRFLYEEELIERIGNLLHERLSQLDTSRTF 387
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 127/178 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ + VK GG+K+LQI DNG GI K+D+ I+CERFTTSKL FEDL+ I T+GFRGEA
Sbjct: 85 ATNVDILVKDGGIKMLQISDNGCGIMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEA 144
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A L ++TKTK + CA++A Y + + KP AG GT I+ +DLFYN+P+R
Sbjct: 145 LASISHIARLHVVTKTKENQCAWKAVYENGVMVGEPKPTAGKDGTTILVQDLFYNVPSRL 204
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
+AL+ PSEE+ KI DVV +YA+H+ VGF+ KK E + SS S+ I ++G
Sbjct: 205 RALRSPSEEFAKIVDVVGKYAIHSDGVGFSCKKFGETQYALNVRGTSSKSDKIRAVFG 262
>gi|357126874|ref|XP_003565112.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Brachypodium
distachyon]
Length = 725
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 214/350 (61%), Gaps = 38/350 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENS+DA ++++ V VK GGLKL+Q+ D
Sbjct: 13 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSIDAGASTVSVAVKDGGLKLIQVSD 72
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T+
Sbjct: 73 DGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 132
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A ++ +Q + +R Q + + + +
Sbjct: 133 HGYR-VSYRDGVMENDPKPCAAVKGTQVMVENLFYNMAARRKTLQNSNDDYPKIVDFISR 191
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELL----SVEGTDDAFQLKVT-------- 215
V + + + RA + ++ + L+ + V D +++V+
Sbjct: 192 FAVHHINVNFSCRKHGANRADVHSASTSSRLDAIRNVYGVSVVRDLMEIEVSDENAVDGI 251
Query: 216 ----GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
G+I+N N+ KK T +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 252 FTMDGFISNANYVAKKTTMILFINDRLVDCTSLKRAIEFVYSAILPQASKPFIYMSINLP 311
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
++VDVN+HPTK EV L+++ IIE ++ +E+ L+ SNT+R+F TQ+ +
Sbjct: 312 REHVDVNIHPTKKEVSLLNQEHIIETIKDAIEEKLMNSNTTRIFQTQTVN 361
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 135/196 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++++ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 53 ASTVSVAVKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQ++ E+LFYN+ RR
Sbjct: 113 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQVMVENLFYNMAARR 172
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I N+YG +
Sbjct: 173 KTLQNSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSASTSSRLDAIRNVYGVS 232
Query: 493 ISRRVRRFSSASQSAL 508
+ R + + ++A+
Sbjct: 233 VVRDLMEIEVSDENAV 248
>gi|385301000|gb|EIF45234.1| dna mismatch repair protein [Dekkera bruxellensis AWRI1499]
Length = 599
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 207/339 (61%), Gaps = 49/339 (14%)
Query: 32 KELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLN 91
+++LENS+DAKST+I++++K GGLKLLQI D+G+GI +D+ ++CERF TSKLT+FEDL
Sbjct: 4 RKMLENSIDAKSTAIEISIKDGGLKLLQITDDGSGINXDDLPLLCERFATSKLTKFEDLQ 63
Query: 92 SISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWCTYL-------------ADLMALA 138
SIST+GFRGEALASISH++HL+++TKT + CA++ C YL ++ A+A
Sbjct: 64 SISTYGFRGEALASISHISHLSVVTKTSSDECAWK-CYYLDGKLVPPXXPGGSSEPRAVA 122
Query: 139 LMEMSQYLQRD-------KEQIGDKEEKQWYRTVE-------HTLVPLMKSQYQPSEK-- 182
+ + + D + + + +++ R V HTL + Q + K
Sbjct: 123 GRDGTSIIVEDLFYNVPSRLRTLRSQSEEYARIVXVTSSYAIHTLNVGFSCKKQGTNKMD 182
Query: 183 IVERACLLE---IASL------NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLL 232
+V R+ + + I S+ N L L+ V D K G++T+ N++ KK + +
Sbjct: 183 LVIRSGMSQKDRIRSIYGSGVANELMLVDVNTDLDIGLNKCHGYVTSCNYTNKKSIKPVF 242
Query: 233 FINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHED 286
FINN P+KR I QVY YLPKG PF+YLSL +DPKNVDVNVHPTK EV FL+E+
Sbjct: 243 FINNRLVVCEPLKRAINQVYVTYLPKGHKPFMYLSLEIDPKNVDVNVHPTKREVRFLNEE 302
Query: 287 TIIERVQSMLEKTLLGSNTSRVFYTQ---STSIQVTVKQ 322
II R+ S +E+ L +TSR F TQ STS Q KQ
Sbjct: 303 EIIGRITSAIEEKLSSLDTSRTFLTQQVISTSQQXKEKQ 341
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 8/191 (4%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+I++++K GGLKLLQI D+G+GI +D+ ++CERF TSKLT+FEDL SIST+GFRGE
Sbjct: 14 KSTAIEISIKDGGLKLLQITDDGSGINXDDLPLLCERFATSKLTKFEDLQSISTYGFRGE 73
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAED 423
ALASISH++HL+++TKT + CA++ Y+D KL P P AG GT II ED
Sbjct: 74 ALASISHISHLSVVTKTSSDECAWKCYYLDGKLVPPXXPGGSSEPRAVAGRDGTSIIVED 133
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+P+R + L+ SEEY +I V S YA+H +VGF+ KKQ N D+ S +
Sbjct: 134 LFYNVPSRLRTLRSQSEEYARIVXVTSSYAIHTLNVGFSCKKQGTNKMDLVIRSGMSQKD 193
Query: 484 VIGNIYGNNIS 494
I +IYG+ ++
Sbjct: 194 RIRSIYGSGVA 204
>gi|413951261|gb|AFW83910.1| hypothetical protein ZEAMMB73_218399 [Zea mays]
Length = 724
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 222/372 (59%), Gaps = 44/372 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++++ VTVK GGLKL+Q+ D+
Sbjct: 18 PPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTVSVTVKDGGLKLIQVSDD 77
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT----- 118
G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T
Sbjct: 78 GYGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLH 137
Query: 119 -------------KTSPCA-YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
+ PCA + + + + ++ + LQ + +
Sbjct: 138 GYRVCYKDGVMENEPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRFA 197
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNL-------ELLSVEGTD----DAFQL 212
V H V ++ + V + + ++ N+ +L+ +E +D DA
Sbjct: 198 VHHINVNFSCRKHGANRADVHSSSTSSRLDTIRNVYGASVVRDLIEIEVSDEDAGDAV-F 256
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G+I+N N+ KK+ +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 257 KMDGYISNANYVAKKIMMILFINDRLVECTALKRAIEFVYSATLPQASKPFIYMSINLPS 316
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLK 326
++VDVN+HPTK EV L+++ +IE +++ +E+ L NT+R+F TQ+ + +T +
Sbjct: 317 EHVDVNIHPTKKEVSLLNQERVIETIKNTIEEKLRNCNTTRIFQTQAVNSALT------Q 370
Query: 327 LLQIQDNGTGIR 338
+ +D GT ++
Sbjct: 371 VYTQKDKGTEVK 382
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 134/195 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++++ VTVK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 57 ASTVSVTVKDGGLKLIQVSDDGYGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 116
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR Y D +++ KPCA +GTQI+ E+LFYN+ RR
Sbjct: 117 LASMTYVGHVTVTTITEGQLHGYRVCYKDGVMENEPKPCAAVKGTQIMVENLFYNMVARR 176
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ ++ SS + I N+YG +
Sbjct: 177 KTLQNSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDTIRNVYGAS 236
Query: 493 ISRRVRRFSSASQSA 507
+ R + + + A
Sbjct: 237 VVRDLIEIEVSDEDA 251
>gi|365989818|ref|XP_003671739.1| hypothetical protein NDAI_0H03230 [Naumovozyma dairenensis CBS 421]
gi|343770512|emb|CCD26496.1| hypothetical protein NDAI_0H03230 [Naumovozyma dairenensis CBS 421]
Length = 911
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 201/340 (59%), Gaps = 36/340 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LD +VVNRIAAGE+I P NALKE++ENS+DAK+TSI V VK+GG+KLLQI DNG+
Sbjct: 4 KIKALDLSVVNRIAAGEIIISPMNALKEMIENSIDAKATSIDVLVKEGGIKLLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA- 124
GI K+D+ I+CERFTTSKL +F+DL +I T+GFRGEALASISH+A +T+ TKTK CA
Sbjct: 64 GIEKDDLPILCERFTTSKLEKFDDLQNIQTYGFRGEALASISHIARVTVTTKTKNDKCAW 123
Query: 125 ---YRWCTYLADLMALALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQYQPS 180
Y L + +A + + L D + + T EH + + S+Y
Sbjct: 124 KVSYSEGKMLNEPKPIAGKDGTTILVEDLFYNVPSRLRSLKSSTEEHNKIVDVTSRYAIH 183
Query: 181 EKIVERACLLEIASLNNLELLSVEGTDDAFQ------------------------LKVTG 216
K + +C S L + + T+D + + V G
Sbjct: 184 SKSISFSCKKFGDSHYALSIPANFSTEDRIRQIYGAQVSSHIIPFTSDPMNDLNVISVEG 243
Query: 217 WITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++++ F+ KK + + FINN P++R + +Y+ +LPKG PF+YLS+ ++P +V
Sbjct: 244 LLSSITFNFKKPIRPIFFINNRLITCEPLRRSLNAIYNNFLPKGIRPFIYLSILINPTSV 303
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
DVNVHPTK EV FL++D I+E + ++ + +TSR F
Sbjct: 304 DVNVHPTKREVRFLNQDEILEEIALNVQSEVSKIDTSRSF 343
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 139/197 (70%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++TSI V VK+GG+KLLQI DNG+GI K+D+ I+CERFTTSKL +F+DL +I T+GFRGE
Sbjct: 40 KATSIDVLVKEGGIKLLQITDNGSGIEKDDLPILCERFTTSKLEKFDDLQNIQTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH+A +T+ TKTK CA++ SY + K+ + KP AG GT I+ EDLFYN+P+R
Sbjct: 100 ALASISHIARVTVTTKTKNDKCAWKVSYSEGKMLNEPKPIAGKDGTTILVEDLFYNVPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
++LK +EE+NKI DV SRYA+H+ + F+ KK ++ + N S + I IYG
Sbjct: 160 LRSLKSSTEEHNKIVDVTSRYAIHSKSISFSCKKFGDSHYALSIPANFSTEDRIRQIYGA 219
Query: 492 NISRRVRRFSSASQSAL 508
+S + F+S + L
Sbjct: 220 QVSSHIIPFTSDPMNDL 236
>gi|449522942|ref|XP_004168484.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cucumis sativus]
Length = 738
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 201/346 (58%), Gaps = 36/346 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI +L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA++TS+ V VK GGLKL+Q+ D
Sbjct: 26 EPPKILRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAQATSVNVVVKDGGLKLIQVSD 85
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS---ISHVAHLTI----- 114
+G GIR ED+ I+CER TTSKL+ FEDL SI + GFRGEALAS + HV TI
Sbjct: 86 DGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGQL 145
Query: 115 ----------ITKTKTSPCAYRWCTYL-ADLMALALMEMSQYLQR---DKEQIGDKEEKQ 160
+ + + PCA T + + + + + LQ D +I D +
Sbjct: 146 HGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNMTARRKTLQNASDDYTKIVDLLSRF 205
Query: 161 WYRTV-------EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ-L 212
+ +H P+ ++ + + NL + V D+A
Sbjct: 206 AIHHINISFSCRKHGAARADVHSVGPTSRLDAIRTVYGASVARNLMKIEVSENDEACSGF 265
Query: 213 KVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G I+N N+ KK+T +LFIN + +KR IE VY+ LPK S P++Y+S+ + P
Sbjct: 266 KMDGLISNSNYVAKKITMVLFINGRMVECSALKRAIEIVYAATLPKASKPYIYMSIILPP 325
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
++VDVNVHPTK EV L+++ IIER+QS +E L SN ++ F Q
Sbjct: 326 EHVDVNVHPTKKEVSLLNQEVIIERIQSAVESKLRSSNDTKAFQEQ 371
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 130/190 (68%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
Q+TS+ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ FEDL SI + GFRG
Sbjct: 64 AQATSVNVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRG 123
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++V H+T+ T TK YR SY D ++ KPCA +GTQI E+LFYN+
Sbjct: 124 EALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNMTA 183
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK L+ S++Y KI D++SR+A+H+ ++ F+ +K AD+ + +S + I +YG
Sbjct: 184 RRKTLQNASDDYTKIVDLLSRFAIHHINISFSCRKHGAARADVHSVGPTSRLDAIRTVYG 243
Query: 491 NNISRRVRRF 500
+++R + +
Sbjct: 244 ASVARNLMKI 253
>gi|449441546|ref|XP_004138543.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cucumis sativus]
Length = 738
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/346 (41%), Positives = 201/346 (58%), Gaps = 36/346 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI +L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA++TS+ V VK GGLKL+Q+ D
Sbjct: 26 EPPKILRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAQATSVNVVVKDGGLKLIQVSD 85
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS---ISHVAHLTI----- 114
+G GIR ED+ I+CER TTSKL+ FEDL SI + GFRGEALAS + HV TI
Sbjct: 86 DGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGQL 145
Query: 115 ----------ITKTKTSPCAYRWCTYL-ADLMALALMEMSQYLQR---DKEQIGDKEEKQ 160
+ + + PCA T + + + + + LQ D +I D +
Sbjct: 146 HGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNMTARRKTLQNASDDYTKIVDLLSRF 205
Query: 161 WYRTV-------EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ-L 212
+ +H P+ ++ + + NL + V D+A
Sbjct: 206 AIHHINISFSCRKHGAARADVHSVGPTSRLDAIRTVYGASVARNLMKIEVSENDEACSGF 265
Query: 213 KVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G I+N N+ KK+T +LFIN + +KR IE VY+ LPK S P++Y+S+ + P
Sbjct: 266 KMDGLISNSNYVAKKITMVLFINGRMVECSALKRAIEIVYAATLPKASKPYIYMSIILPP 325
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
++VDVNVHPTK EV L+++ IIER+QS +E L SN ++ F Q
Sbjct: 326 EHVDVNVHPTKKEVSLLNQEVIIERIQSAVESKLRSSNDTKAFQEQ 371
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 130/190 (68%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
Q+TS+ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ FEDL SI + GFRG
Sbjct: 64 AQATSVNVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRG 123
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALAS+++V H+T+ T TK YR SY D ++ KPCA +GTQI E+LFYN+
Sbjct: 124 EALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNMTA 183
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRK L+ S++Y KI D++SR+A+H+ ++ F+ +K AD+ + +S + I +YG
Sbjct: 184 RRKTLQNASDDYTKIVDLLSRFAIHHINISFSCRKHGAARADVHSVGPTSRLDAIRTVYG 243
Query: 491 NNISRRVRRF 500
+++R + +
Sbjct: 244 ASVARNLMKI 253
>gi|393220010|gb|EJD05496.1| DNA mismatch repair protein MutL [Fomitiporia mediterranea MF3/22]
Length = 757
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 149/226 (65%), Gaps = 14/226 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L S STSI+VTVK GGLKLLQIQDNG GIRK D+ I+ E
Sbjct: 31 IIHRPSSALKELLENS-----LDAGSTSIRVTVKDGGLKLLQIQDNGCGIRKSDLAILAE 85
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL+ F DL+S+ T+GFRGEALASISHV+ L+++TKTKT CAY+A Y+D L P
Sbjct: 86 RFTTSKLSTFSDLSSLRTYGFRGEALASISHVSQLSVVTKTKTDSCAYKAHYLDGHLVPP 145
Query: 408 -------IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
KPCAGN GT I AE+LFYN P R AL+ SEEY +I DVV+RYAVHNP V
Sbjct: 146 KPGQSADPKPCAGNDGTTITAENLFYNTPARLAALRSSSEEYARILDVVTRYAVHNPSVA 205
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVR--RFSSAS 504
F KK D+ T S+ + I +YG I+R + +FSS S
Sbjct: 206 FVCKKAGSAGPDLSTPSKSTTKQAIRLLYGQTIARELLSIKFSSKS 251
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 108/125 (86%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
D P I++L E+++NRIAAGE+I RP++ALKELLENSLDA STSI+VTVK GGLKLLQIQ
Sbjct: 10 DGPKPIRRLQESLINRIAAGEIIHRPSSALKELLENSLDAGSTSIRVTVKDGGLKLLQIQ 69
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG GIRK D+ I+ ERFTTSKL+ F DL+S+ T+GFRGEALASISHV+ L+++TKTKT
Sbjct: 70 DNGCGIRKSDLAILAERFTTSKLSTFSDLSSLRTYGFRGEALASISHVSQLSVVTKTKTD 129
Query: 122 PCAYR 126
CAY+
Sbjct: 130 SCAYK 134
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 22/177 (12%)
Query: 191 EIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQ 244
E +++ +++ EG+ K T+ N+ +KKM FLLFIN+ IKR +E
Sbjct: 262 EAMDIDDTDIIEGEGS-----WKGEALFTSANYHSKKMVFLLFINHRLVESTRIKRAVEG 316
Query: 245 VYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
VYS LPKG+ PFVYLSL +DP+ VDVNVHPTK EVHFL E+ II RV +++ L G
Sbjct: 317 VYSTILPKGTSPFVYLSLEIDPRAVDVNVHPTKREVHFLDEEAIITRVSDEIQQALAGQG 376
Query: 305 TSRVFYTQSTSIQVTVKQGGLKLLQ--------IQDNGTGIRKEDMDIVCERFTTSK 353
SRV Q+ Q + G L+ Q GT ++D D TT+K
Sbjct: 377 RSRVLEYQT---QTLLTGGTLEASQRDKKDKGKASSQGTNDVEDDGDHAAPSVTTAK 430
>gi|443707533|gb|ELU03070.1| hypothetical protein CAPTEDRAFT_136607 [Capitella teleta]
Length = 293
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 129/160 (80%)
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+KEDM IVCERFTTSKL FEDL I+T+GFRGEALASISHVAH+TI T+T S CAYR
Sbjct: 8 QKEDMSIVCERFTTSKLKTFEDLTQIATYGFRGEALASISHVAHVTITTRTNESKCAYRG 67
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
++ D +LK P+KPCAGN GTQI+ EDLFYN+ TRRKAL+ P EE++K+ DVVSRYAVHN
Sbjct: 68 AFSDGQLKAPLKPCAGNVGTQILVEDLFYNVATRRKALRSPGEEHSKVVDVVSRYAVHNS 127
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
V FTLKK E+LA++RT+ NS+H + I +IYG +++ +
Sbjct: 128 KVAFTLKKHGESLAEVRTSANSTHVDNIRSIYGPAVAKEL 167
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 165/286 (57%), Gaps = 34/286 (11%)
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRW 127
+KEDM IVCERFTTSKL FEDL I+T+GFRGEALASISHVAH+TI T+T S CAYR
Sbjct: 8 QKEDMSIVCERFTTSKLKTFEDLTQIATYGFRGEALASISHVAHVTITTRTNESKCAYRG 67
Query: 128 C----TYLADLMALALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY----- 177
A L A +Q L D + + + EH+ V + S+Y
Sbjct: 68 AFSDGQLKAPLKPCAGNVGTQILVEDLFYNVATRRKALRSPGEEHSKVVDVVSRYAVHNS 127
Query: 178 -------QPSEKIVERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTGWITN 220
+ E + E ++N+ ELL V D + GW++N
Sbjct: 128 KVAFTLKKHGESLAEVRTSANSTHVDNIRSIYGPAVAKELLEVTHEDSQLGFTMNGWVSN 187
Query: 221 VNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N+S KK T LLFIN+ +++ IE VY++YLPK PF+Y+SL + P+N+DVNVH
Sbjct: 188 ANYSIKKCTMLLFINHRLVDSTALRKAIEAVYAVYLPKNMHPFLYISLEIAPQNIDVNVH 247
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
PTKHEVHFLHED++IE VQ ++ LLGSN SR ++TQ +S QV +
Sbjct: 248 PTKHEVHFLHEDSVIESVQKCIDARLLGSNASRTYFTQVSS-QVVI 292
>gi|66807125|ref|XP_637285.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|74853037|sp|Q54KD8.1|MLH1_DICDI RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL
protein homolog 1
gi|60465685|gb|EAL63764.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 884
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 164/244 (67%), Gaps = 23/244 (9%)
Query: 273 VHPTKHEVHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
++ +K ++H L ++ + I+R + L++ L +ST+I VTVK GG
Sbjct: 56 INESKKKIHRLTQEVVNKISAGEVIQRPSNALKELL-----ENCLDAKSTTITVTVKDGG 110
Query: 325 LKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 384
+K LQIQDNG+GIR EDM IVCERFTTSKLT+FEDL SI +FGFRGEAL+SISHV+HL I
Sbjct: 111 MKFLQIQDNGSGIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKI 170
Query: 385 ITKTKTSPCAYRASYIDSKLKDP--------IKPCAGNQGTQIIAEDLFYNIPTRRKALK 436
+TKT SPCAYRA Y++ KL P KPCAG GTQI EDLF+N P+R+ LK
Sbjct: 171 LTKTADSPCAYRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLK 230
Query: 437 QPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN--VNSSHSEVIGNIYGNNIS 494
+E+++I ++ +YA++NP V F LKKQ + ++ T+ NS +VIG++YG ++S
Sbjct: 231 NTVDEHSRIVLLMKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDLS 290
Query: 495 RRVR 498
+ ++
Sbjct: 291 KELK 294
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 108/123 (87%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L + VVN+I+AGEVIQRP+NALKELLEN LDAKST+I VTVK GG+K LQIQDNG+
Sbjct: 62 KIHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGS 121
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GIR EDM IVCERFTTSKLT+FEDL SI +FGFRGEAL+SISHV+HL I+TKT SPCAY
Sbjct: 122 GIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCAY 181
Query: 126 RWC 128
R C
Sbjct: 182 RAC 184
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 216 GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
G+ ++ N+++KK+ F+LFIN +K +EQVYS YLPKG+ PF+++ L + PKN+
Sbjct: 332 GFFSSTNYNSKKINFILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLLVPPKNI 391
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
DVN+HPTK EV LHE+ IIE +Q +++ L S+ S+ F TQ
Sbjct: 392 DVNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFSTQ 434
>gi|409047464|gb|EKM56943.1| hypothetical protein PHACADRAFT_119030 [Phanerochaete carnosa
HHB-10118-sp]
Length = 718
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 158/229 (68%), Gaps = 13/229 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L S ++ +TSI+V+V+ GG+KLLQIQDNG GI K D+ I+ E
Sbjct: 34 IIHRPSSALKELLENSLDAK-----ATSIKVSVEDGGMKLLQIQDNGCGIWKADLPILAE 88
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--K 405
RFTTSK+T F+DL ++T+GFRGEALAS+S+V+ L+++TKTK+ CA++A+YID KL K
Sbjct: 89 RFTTSKITSFQDLERLTTYGFRGEALASVSYVSQLSVVTKTKSDTCAWKAAYIDGKLASK 148
Query: 406 D--PIKP--CAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGF 461
D P +P CAGN GT I E+LFYN PTR AL+ SEEY++I DVV++YAVHNPHV F
Sbjct: 149 DGSPTEPKACAGNDGTIITVENLFYNTPTRLSALRGSSEEYSRILDVVTKYAVHNPHVSF 208
Query: 462 TLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV--RRFSSASQSAL 508
T KK DI T SS + IG +YG I++ + R SSA +
Sbjct: 209 TCKKSGSASPDITTPSGSSVKQAIGQLYGQTIAKELLETRISSAGDGVI 257
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 109/126 (86%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
++ P I++L+E V+NRIAAGE+I RP++ALKELLENSLDAK+TSI+V+V+ GG+KLLQI
Sbjct: 12 LNGPKPIRRLEEAVINRIAAGEIIHRPSSALKELLENSLDAKATSIKVSVEDGGMKLLQI 71
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG GI K D+ I+ ERFTTSK+T F+DL ++T+GFRGEALAS+S+V+ L+++TKTK+
Sbjct: 72 QDNGCGIWKADLPILAERFTTSKITSFQDLERLTTYGFRGEALASVSYVSQLSVVTKTKS 131
Query: 121 SPCAYR 126
CA++
Sbjct: 132 DTCAWK 137
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 217 WITNVNFSTKKMTFLLFI------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ T+ N+ KKM FLLFI ++ IK+ +E +Y+ LPKG+FPFVYLSL +D ++VD
Sbjct: 270 FFTSPNYQAKKMVFLLFITHRLVESSRIKKALETIYTGILPKGAFPFVYLSLQIDSRSVD 329
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTK EVHFL E+ I +++ + L+G N S+ F Q+
Sbjct: 330 VNVHPTKREVHFLDEEQITQKIGDAVHAILIGQNQSKTFEYQT 372
>gi|390599440|gb|EIN08836.1| DNA mismatch repair protein MutL [Punctularia strigosozonata
HHB-11173 SS5]
Length = 828
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 145/217 (66%), Gaps = 12/217 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R S L++ L S STSI++TVK GG+KLLQIQDNG GIRK D+ I+ E
Sbjct: 37 IIQRPASALKELLENS-----LDAGSTSIKITVKDGGMKLLQIQDNGHGIRKTDLPILAE 91
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL F DL+ ++T+GFRGEALAS+SHVAHL+++TKTK CA++A Y D L P
Sbjct: 92 RFTTSKLQTFSDLSGLTTYGFRGEALASVSHVAHLSVVTKTKEDSCAWKAYYSDGVLVPP 151
Query: 408 -------IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
KPCAG GT I E+LFYN PTR AL+ SEEY +I DVV+RYAVHNPHV
Sbjct: 152 KPNLTPDPKPCAGTDGTVITVENLFYNTPTRLAALRSSSEEYGRILDVVTRYAVHNPHVA 211
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
FT KK + D+ T S+ I +YG+ ++R +
Sbjct: 212 FTCKKVGTSSPDVSTPSGSTTMGTIRLLYGHTVAREL 248
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 108/127 (85%), Gaps = 2/127 (1%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L ET++NRIAAGE+IQRPA+ALKELLENSLDA STSI++TVK GG+KLLQIQDNG G
Sbjct: 21 IQRLHETLINRIAAGEIIQRPASALKELLENSLDAGSTSIKITVKDGGMKLLQIQDNGHG 80
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK D+ I+ ERFTTSKL F DL+ ++T+GFRGEALAS+SHVAHL+++TKTK CA
Sbjct: 81 IRKTDLPILAERFTTSKLQTFSDLSGLTTYGFRGEALASVSHVAHLSVVTKTKEDSCA-- 138
Query: 127 WCTYLAD 133
W Y +D
Sbjct: 139 WKAYYSD 145
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 216 GWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+I++ N+ KK TFLLFIN+ I+R +E +Y+ LPKG+ P++YLSL +DP+ V
Sbjct: 324 AYISSTNYHAKKTTFLLFINHRLVDSSRIRRALEGIYNGILPKGTCPWIYLSLQLDPRTV 383
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
DVNVHPTK EVHFL E+ I RV + L+ N SR F Q+T
Sbjct: 384 DVNVHPTKREVHFLDEEAITSRVADACSEMLVKKNESRTFTYQTT 428
>gi|353238137|emb|CCA70092.1| related to DNA mismatch repair protein [Piriformospora indica DSM
11827]
Length = 737
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 154/233 (66%), Gaps = 17/233 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L +TSI++TVK GGLKLLQIQDNG+GIRK D+ I+CE
Sbjct: 26 IIHRPASALKELL-----ENALDAGATSIKITVKDGGLKLLQIQDNGSGIRKADLPILCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT F+DL++++T+GFRGEALASISHVAHL+++TKTK CA+RA Y D L P
Sbjct: 81 RFTTSKLTSFQDLSALTTYGFRGEALASISHVAHLSVVTKTKADSCAWRACYSDGVLAPP 140
Query: 408 -------IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
KPCAGN GT + EDLFYN PTR AL+ ++EY +I DVV+ YAVHNP +
Sbjct: 141 KPGLSVDPKPCAGNDGTLLTVEDLFYNTPTRLAALRSGADEYKRILDVVTNYAVHNPSIA 200
Query: 461 FTLKKQNENLA-----DIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSAL 508
F KK + +LA D+ T +++ + I +YG ++S+ + Q A+
Sbjct: 201 FQCKKASCSLAGQAQTDVSTPGSATVLQAIALLYGASLSKELVHVKLDDQKAI 253
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 114/126 (90%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q P I++L+E+++NRIAAGE+I RPA+ALKELLEN+LDA +TSI++TVK GGLKLLQIQD
Sbjct: 6 QTPVIRRLEESLINRIAAGEIIHRPASALKELLENALDAGATSIKITVKDGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG+GIRK D+ I+CERFTTSKLT F+DL++++T+GFRGEALASISHVAHL+++TKTK
Sbjct: 66 NGSGIRKADLPILCERFTTSKLTSFQDLSALTTYGFRGEALASISHVAHLSVVTKTKADS 125
Query: 123 CAYRWC 128
CA+R C
Sbjct: 126 CAWRAC 131
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 13/146 (8%)
Query: 180 SEKIVERACLLEIASLNNLELLSVEGTD------DAFQLKVTGWITNVNFSTKKMTFLLF 233
S +++ LL ASL+ EL+ V+ D D+ + +N N +K+ TFLLF
Sbjct: 223 SATVLQAIALLYGASLSK-ELVHVKLDDQKAIDKDSSIWSAEAFASNPNHQSKRFTFLLF 281
Query: 234 INNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDT 287
IN+ IKR +E VY+ LPKGS PFVYLSL +DPK+VD NVHPTK EVHFLHE+
Sbjct: 282 INHRLVDSSRIKRAMEAVYNGILPKGSAPFVYLSLLLDPKDVDANVHPTKREVHFLHEEA 341
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQS 313
I E + ++ + T+R F TQ+
Sbjct: 342 ITEIIADQVQLAVTKQGTTRTFVTQT 367
>gi|336375232|gb|EGO03568.1| hypothetical protein SERLA73DRAFT_165231 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388244|gb|EGO29388.1| hypothetical protein SERLADRAFT_445211 [Serpula lacrymans var.
lacrymans S7.9]
Length = 700
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 139/193 (72%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+VTVK+GG+KLLQIQDNG+GIRK D+ I+ ERFTTSKL+ F DL ++T+GFRGEA
Sbjct: 53 STSIRVTVKEGGMKLLQIQDNGSGIRKADLPILAERFTTSKLSTFSDLTRLTTYGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLK--------DPIKPCAGNQGTQIIAEDL 424
LASISHVAHL+IITKTK CA++A+Y D L DP KPCAGN GT I EDL
Sbjct: 113 LASISHVAHLSIITKTKKDACAWKAAYSDGSLAPIKAGQTVDP-KPCAGNDGTTITIEDL 171
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN PTR AL+ SEEY++I DV++RYAVHNP + F KK D+ T +S +
Sbjct: 172 FYNTPTRLSALRSSSEEYSRILDVMTRYAVHNPKIAFVCKKAGSPSLDLSTPSSSDVPQA 231
Query: 485 IGNIYGNNISRRV 497
I +Y ++I++ +
Sbjct: 232 IRLLYSHSIAKEL 244
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 107/124 (86%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I +L E V+NRIAAGE+I RPA+ALKEL+ENSLDA STSI+VTVK+GG+KLLQIQD
Sbjct: 13 EPQPIHRLQEAVINRIAAGEIIHRPASALKELIENSLDAGSTSIRVTVKEGGMKLLQIQD 72
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG+GIRK D+ I+ ERFTTSKL+ F DL ++T+GFRGEALASISHVAHL+IITKTK
Sbjct: 73 NGSGIRKADLPILAERFTTSKLSTFSDLTRLTTYGFRGEALASISHVAHLSIITKTKKDA 132
Query: 123 CAYR 126
CA++
Sbjct: 133 CAWK 136
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 218 ITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
TN N+ KKM FLLFIN+ IKR IE VYS LPKG+ PFVYLSL +DP++VDV
Sbjct: 278 FTNANYQAKKMVFLLFINHRLVESSRIKRSIESVYSGVLPKGASPFVYLSLEIDPRSVDV 337
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
NVHPTK EVHFL E+ I+E++ ++KTL G + SR+F Q S
Sbjct: 338 NVHPTKREVHFLDEEAIMEKIADAIQKTLAGQSQSRIFEYQVIS 381
>gi|402588986|gb|EJW82919.1| DNA mismatch repair protein MutL containing protein [Wuchereria
bancrofti]
Length = 658
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 134/183 (73%), Gaps = 1/183 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I +T K GGL LL++QDNG GI K D+ IVCERFTTSKL ++EDL +STFGFRGEA
Sbjct: 38 ATEIIITAKNGGLDLLKVQDNGKGIAKNDLAIVCERFTTSKLEKYEDLECMSTFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +TII+KT SPCAY Y DSKL+ IKP AG GT + AEDLFYN P+RR
Sbjct: 98 LASISHVAKVTIISKTSDSPCAYVGRYTDSKLQGDIKPSAGLDGTSVTAEDLFYNCPSRR 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
++LK P++E N+IAD+V RYA+HNP V FTL++ +D RT ++ E I ++ G
Sbjct: 158 RSLKYPADEMNRIADIVVRYAIHNPSVSFTLRRCGSG-SDFRTAGTNNLCETISSLLGGK 216
Query: 493 ISR 495
S+
Sbjct: 217 FSK 219
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 189/360 (52%), Gaps = 44/360 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E VVNRIAAGEVI R ANA+KEL+EN+LDA +T I +T K GGL LL++QDNG G
Sbjct: 2 IRRLPENVVNRIAAGEVIVRAANAIKELIENALDAGATEIIITAKNGGLDLLKVQDNGKG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY- 125
I K D+ IVCERFTTSKL ++EDL +STFGFRGEALASISHVA +TII+KT SPCAY
Sbjct: 62 IAKNDLAIVCERFTTSKLEKYEDLECMSTFGFRGEALASISHVAKVTIISKTSDSPCAYV 121
Query: 126 -RW--CTYLADLMALALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---Q 178
R+ D+ A ++ + D + Y E + + +Y
Sbjct: 122 GRYTDSKLQGDIKPSAGLDGTSVTAEDLFYNCPSRRRSLKYPADEMNRIADIVVRYAIHN 181
Query: 179 PSEKIVERACL----LEIASLNNL--------------ELLSVEGTDDAFQLKVTGWITN 220
PS R C A NNL +L+ + +D A + G
Sbjct: 182 PSVSFTLRRCGSGSDFRTAGTNNLCETISSLLGGKFSKDLVLLNHSDSALYFTLKGCFVR 241
Query: 221 VNFSTKKMT----------FLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
S T F LFIN +K+ ++ V++ PFV +SL +
Sbjct: 242 PTASCTAETLQNRQNCQKVFYLFINGRSVECQALKQALDVVFAA--QNTMSPFVMISLQI 299
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
+P+ VDVNVHPTK V+FL +D+II +Q +E +L S S + + + V GG
Sbjct: 300 EPRRVDVNVHPTKSVVYFLEQDSIISSIQDYVENLILSSAGSCDYKKKKLMMLVPESLGG 359
>gi|170580896|ref|XP_001895452.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
gi|158597590|gb|EDP35698.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
Length = 684
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 134/183 (73%), Gaps = 1/183 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I +T K GGL LL++QDNG GI K D+ IVCERFTTSKL ++EDL +STFGFRGEA
Sbjct: 38 ATEIIITAKNGGLDLLKVQDNGKGIAKNDLAIVCERFTTSKLEKYEDLECMSTFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +TII+KT SPCAY Y DSKL+ IKP AG GT + AEDLFYN P+RR
Sbjct: 98 LASISHVAKVTIISKTSDSPCAYVGRYTDSKLQGDIKPSAGLDGTSVTAEDLFYNCPSRR 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
++LK P++E N+IAD+V RYA+HNP V FTL++ +D RT ++ E I ++ G
Sbjct: 158 RSLKYPADEMNRIADIVVRYAIHNPSVSFTLRRCGSG-SDFRTAGTNNLCETISSLLGGK 216
Query: 493 ISR 495
S+
Sbjct: 217 FSK 219
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 179/337 (53%), Gaps = 44/337 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E VVNRIAAGEVI R AN +KEL+EN+LDA +T I +T K GGL LL++QDNG G
Sbjct: 2 IRRLPENVVNRIAAGEVIVRAANVIKELIENALDAGATEIIITAKNGGLDLLKVQDNGKG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY- 125
I K D+ IVCERFTTSKL ++EDL +STFGFRGEALASISHVA +TII+KT SPCAY
Sbjct: 62 IAKNDLAIVCERFTTSKLEKYEDLECMSTFGFRGEALASISHVAKVTIISKTSDSPCAYV 121
Query: 126 -RW--CTYLADLMALALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---Q 178
R+ D+ A ++ + D + Y E + + +Y
Sbjct: 122 GRYTDSKLQGDIKPSAGLDGTSVTAEDLFYNCPSRRRSLKYPADEMNRIADIVVRYAIHN 181
Query: 179 PSEKIVERACL----LEIASLNNL--------------ELLSVEGTDDAFQLKVTGWITN 220
PS R C A NNL +L+ + +D A + G
Sbjct: 182 PSVSFTLRRCGSGSDFRTAGTNNLCETISSLLGGKFSKDLILLNHSDSALYFTLKGCFVR 241
Query: 221 VNFSTKKMT----------FLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
S T F LFIN +K+ ++ V+ PFV +SL +
Sbjct: 242 PTASCTAETLQNRQNCQKVFYLFINGRSVECQALKQALDVVFGAQ--NTMSPFVMISLQI 299
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+P+ VDVNVHPTK V+FL +D+II +Q +E +L
Sbjct: 300 EPRRVDVNVHPTKSVVYFLEQDSIISSIQDYVENLIL 336
>gi|312082271|ref|XP_003143375.1| hypothetical protein LOAG_07794 [Loa loa]
gi|307761459|gb|EFO20693.1| hypothetical protein LOAG_07794 [Loa loa]
Length = 647
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 134/183 (73%), Gaps = 1/183 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I +T K GGL LL++QDNG GI K+D+ IVCERFTTSKL ++EDL +STFGFRGEA
Sbjct: 38 ATEIVITAKNGGLDLLKVQDNGKGIAKDDLPIVCERFTTSKLERYEDLECMSTFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+HVA +TII+K SPCAY Y DSKL+ IKP AG GT + AEDLFYN P+RR
Sbjct: 98 LASITHVAKVTIISKIPDSPCAYVGRYTDSKLQGNIKPSAGLDGTTVTAEDLFYNCPSRR 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ALK P++E N+IADVV RYA+HNP V FTL++ +D RT ++ E I ++ G
Sbjct: 158 RALKYPADEMNRIADVVVRYAIHNPSVSFTLRRCGSG-SDFRTAGTNNLCETISSLLGGK 216
Query: 493 ISR 495
S+
Sbjct: 217 FSK 219
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 180/337 (53%), Gaps = 44/337 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E VVNRIAAGEVI R ANA+KEL+EN+LDA +T I +T K GGL LL++QDNG G
Sbjct: 2 IRRLPEDVVNRIAAGEVIVRAANAIKELIENALDAGATEIVITAKNGGLDLLKVQDNGKG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA-- 124
I K+D+ IVCERFTTSKL ++EDL +STFGFRGEALASI+HVA +TII+K SPCA
Sbjct: 62 IAKDDLPIVCERFTTSKLERYEDLECMSTFGFRGEALASITHVAKVTIISKIPDSPCAYV 121
Query: 125 --YRWCTYLADLMALALMEMSQYLQRDK-EQIGDKEEKQWYRTVEHTLVPLMKSQY---Q 178
Y ++ A ++ + D + Y E + + +Y
Sbjct: 122 GRYTDSKLQGNIKPSAGLDGTTVTAEDLFYNCPSRRRALKYPADEMNRIADVVVRYAIHN 181
Query: 179 PSEKIVERACL----LEIASLNNL--------------ELLSVEGTDDAFQLKVTGWITN 220
PS R C A NNL +L+ + D A + G +
Sbjct: 182 PSVSFTLRRCGSGSDFRTAGTNNLCETISSLLGGKFSKDLILLNHGDSALYFTLKGCLVR 241
Query: 221 VNFST----------KKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
S ++ F LFIN +K+ ++ V++ PFV +SL +
Sbjct: 242 PTASCTAESLQDRQNRQKVFYLFINGRSVECLALKQALDVVFAA--QNTMSPFVMISLQI 299
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+PK VDVNVHPTK V+FL +D+II +Q +E +L
Sbjct: 300 EPKRVDVNVHPTKSIVYFLEQDSIISSIQDYVENLIL 336
>gi|378726598|gb|EHY53057.1| DNA mismatch repair protein MLH1 [Exophiala dermatitidis
NIH/UT8656]
Length = 755
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 134/197 (68%), Gaps = 7/197 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I+V VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 68 STAIEVLVKDGGLKLLQITDNGHGIEKDDLPILCERFTTSKLKNFEDLMSIGTYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL + T+T TS CA++A Y D KL P K CAG GTQI EDLF
Sbjct: 128 LASISHIAHLRVTTRTATSSCAWQAHYADGKLTPPKPGQSAEPKACAGRLGTQITVEDLF 187
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YNIP RR+A + PSEEY KI DVV+RYAVH V F++KK E+ A ++ + I
Sbjct: 188 YNIPNRRRAFRSPSEEYAKILDVVTRYAVHREGVAFSVKKHGESGAGFSVAAAAAKVDRI 247
Query: 486 GNIYGNNISRRVRRFSS 502
YG +++ + F +
Sbjct: 248 KQAYGGGVAKELMEFQT 264
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 104/133 (78%), Gaps = 2/133 (1%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK LD VVN+IAAGE+I P +ALKELLENS+DA ST+I+V VK GGLKLLQI
Sbjct: 26 LQTPRRIKALDPNVVNKIAAGEIIVAPMHALKELLENSVDAGSTAIEVLVKDGGLKLLQI 85
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K+D+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL + T+T T
Sbjct: 86 TDNGHGIEKDDLPILCERFTTSKLKNFEDLMSIGTYGFRGEALASISHIAHLRVTTRTAT 145
Query: 121 SPCAYRWCTYLAD 133
S CA W + AD
Sbjct: 146 SSCA--WQAHYAD 156
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D + + +G+ +N N+S K+ T LLFIN+ +K+ IEQ Y ++LPK
Sbjct: 258 ELMEFQTEDAKWGFRASGYASNANYSGKRSTLLLFINHRSVESSAVKKAIEQTYQMFLPK 317
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVYLSL +DP VDVNVHPTK EVHFL+ED II+ V + + ++L +TSR F TQ
Sbjct: 318 GGHPFVYLSLDIDPARVDVNVHPTKREVHFLNEDDIIDLVCASIRESLAKVDTSRTFKTQ 377
Query: 313 S 313
+
Sbjct: 378 T 378
>gi|50548393|ref|XP_501666.1| YALI0C10032p [Yarrowia lipolytica]
gi|49647533|emb|CAG81973.1| YALI0C10032p [Yarrowia lipolytica CLIB122]
Length = 656
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 199/349 (57%), Gaps = 50/349 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I +L T +N+IAAGE++ P NALKEL+EN++DA +T I V K GG+KLLQ+ DNG+G
Sbjct: 2 IHQLSSTTINQIAAGEIVVGPQNALKELIENAIDAAATRIDVITKDGGVKLLQVTDNGSG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +D+ ++C R+ TSK+ +DL ++++FGFRGEALASISHV+H+T+ITK ++ P A R
Sbjct: 62 IAPDDLKLLCRRWCTSKIDTHDDLRTLTSFGFRGEALASISHVSHVTVITKLRSEPAASR 121
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQI------------------------------GDK 156
L ++ AL + Q + + D
Sbjct: 122 AKYELGEISEQALQAGNTGTQITVQDLFFNTPQRLRALNKADCHTKCVDVVSRYGIHNDS 181
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE----RACLLEI------ASLNNLELLSVEGT 206
E + R + +++ +K + ++V L+E+ A + + LS G
Sbjct: 182 VEFSFRRQNDSSMLFTLKGSKRDRIRVVYGSRVSGSLVEVEDDTDNADESVISTLSNIGL 241
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYL 260
A +L ++ N N+S K TF++FINN PI++ + VYS YLP +FPFVYL
Sbjct: 242 SRAPELLIS----NPNYSNTKSTFIIFINNRLVSCEPIRKALVAVYSRYLPTKAFPFVYL 297
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
SL +DP+N+DVNVHPTK EV FLH+ I++ + ++++ TL + SRVF
Sbjct: 298 SLFIDPENLDVNVHPTKQEVRFLHQAEIVDFLSNLVDDTLSKIDESRVF 346
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 122/182 (67%), Gaps = 4/182 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V K GG+KLLQ+ DNG+GI +D+ ++C R+ TSK+ +DL ++++FGFRGEA
Sbjct: 38 ATRIDVITKDGGVKLLQVTDNGSGIAPDDLKLLCRRWCTSKIDTHDDLRTLTSFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHV+H+T+ITK ++ P A RA Y ++ + AGN GTQI +DLF+N P R
Sbjct: 98 LASISHVSHVTVITKLRSEPAASRAKYELGEISEQALQ-AGNTGTQITVQDLFFNTPQRL 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+AL + ++ + K DVVSRY +HN V F+ ++QN+ + + + S + I +YG+
Sbjct: 157 RALNK-ADCHTKCVDVVSRYGIHNDSVEFSFRRQND--SSMLFTLKGSKRDRIRVVYGSR 213
Query: 493 IS 494
+S
Sbjct: 214 VS 215
>gi|426194700|gb|EKV44631.1| hypothetical protein AGABI2DRAFT_120758 [Agaricus bisporus var.
bisporus H97]
Length = 739
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 142/192 (73%), Gaps = 7/192 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++TVK GG+KLLQIQDNG GIRK D+ I+ ERFTTSKL+ F+DL+ I T+GFRGEA
Sbjct: 48 STSIRITVKDGGMKLLQIQDNGCGIRKTDLPILAERFTTSKLSTFDDLSRIQTYGFRGEA 107
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LAS+SHVAHL++ITKTK+ P A++ASYID L DP + CAGN GT I EDLF
Sbjct: 108 LASMSHVAHLSVITKTKSEPVAWKASYIDGVLVDPRTRQSSEPRACAGNDGTTITIEDLF 167
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN PTR +A + SEEY++I DV+++YA+HNP V F+ KK + DI T + S + I
Sbjct: 168 YNTPTRLQAFRNISEEYSRILDVITKYAIHNPKVSFSCKKATSSSPDIATPGSMSVQQAI 227
Query: 486 GNIYGNNISRRV 497
+YG++++ ++
Sbjct: 228 RLLYGHSLATQL 239
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 108/123 (87%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++L+++++NRIAAGE+I RPA+ALKEL+EN LDA STSI++TVK GG+KLLQIQDN
Sbjct: 9 PKPIRRLEDSLINRIAAGEIIHRPASALKELIENCLDAGSTSIRITVKDGGMKLLQIQDN 68
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GIRK D+ I+ ERFTTSKL+ F+DL+ I T+GFRGEALAS+SHVAHL++ITKTK+ P
Sbjct: 69 GCGIRKTDLPILAERFTTSKLSTFDDLSRIQTYGFRGEALASMSHVAHLSVITKTKSEPV 128
Query: 124 AYR 126
A++
Sbjct: 129 AWK 131
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 11/110 (10%)
Query: 215 TGW-----ITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLC 263
T W +N N+ KK TFLLFIN+ + KR E VY LPKG+FPFVYLSL
Sbjct: 271 TNWSAELHFSNANYQAKKTTFLLFINHRLVESSRMKRSFEAVYHGVLPKGAFPFVYLSLD 330
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP+ VDVNVHPTK EVHFL E+ I ER+ + ++ L SR F Q+
Sbjct: 331 IDPRCVDVNVHPTKREVHFLKEEEITERISDITQQKLALQGQSRTFEYQT 380
>gi|409075270|gb|EKM75652.1| hypothetical protein AGABI1DRAFT_132042 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 739
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 140/189 (74%), Gaps = 7/189 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++TVK GG+KLLQIQDNG GIRK D+ I+ ERFTTSKL+ F+DL+ I T+GFRGEA
Sbjct: 48 STSIRITVKDGGMKLLQIQDNGCGIRKTDLPILAERFTTSKLSTFDDLSRIQTYGFRGEA 107
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LAS+SHVAHL++ITKTK+ P A++ASYID L DP + CAGN GT I EDLF
Sbjct: 108 LASMSHVAHLSVITKTKSEPVAWKASYIDGVLVDPRTRQSSEPRACAGNDGTTITIEDLF 167
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN PTR +A + SEEY++I DV+++YA+HNP V F+ KK + DI T + S + I
Sbjct: 168 YNTPTRLQAFRNISEEYSRILDVITKYAIHNPKVSFSCKKATSSSPDIATPGSMSVQQAI 227
Query: 486 GNIYGNNIS 494
+YG++++
Sbjct: 228 RLLYGHSLA 236
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 108/123 (87%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++L+E+++NRIAAGE+I RPA+ALKEL+EN LDA STSI++TVK GG+KLLQIQDN
Sbjct: 9 PKPIRRLEESLINRIAAGEIIHRPASALKELIENCLDAGSTSIRITVKDGGMKLLQIQDN 68
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GIRK D+ I+ ERFTTSKL+ F+DL+ I T+GFRGEALAS+SHVAHL++ITKTK+ P
Sbjct: 69 GCGIRKTDLPILAERFTTSKLSTFDDLSRIQTYGFRGEALASMSHVAHLSVITKTKSEPV 128
Query: 124 AYR 126
A++
Sbjct: 129 AWK 131
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 11/110 (10%)
Query: 215 TGW-----ITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLC 263
T W +N N+ KK TFLLFIN+ + KR E VY LPKG+FPFVYLSL
Sbjct: 271 TNWSAELHFSNANYQAKKTTFLLFINHRLVESSRMKRSFEAVYHGVLPKGAFPFVYLSLD 330
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+DP+ VDVNVHPTK EVHFL E+ I ER+ + ++ L SR F Q+
Sbjct: 331 IDPRCVDVNVHPTKREVHFLKEEEITERISDITQQKLALQGQSRTFEYQT 380
>gi|320164350|gb|EFW41249.1| DNA mismatch repair protein MLH1 [Capsaspora owczarzaki ATCC 30864]
Length = 762
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 136/189 (71%), Gaps = 9/189 (4%)
Query: 318 VTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASIS 377
++VK GG+KL+QI DNG+GI +D+D+VCER TTSKL +F+DL SI+TFGFRGEALAS++
Sbjct: 1 MSVKAGGMKLMQIADNGSGIHLDDLDLVCERHTTSKLERFDDLKSIATFGFRGEALASVT 60
Query: 378 HVAHLTIITKTKTSPCAYRASYIDSKLKDPI--------KPCAGNQGTQIIAEDLFYNIP 429
VAH++II+KT + CAY+A Y D KL P +PCAGN+GT I EDLFYNI
Sbjct: 61 RVAHVSIISKTADAKCAYKAHYADEKLVPPTASDTNARPRPCAGNKGTIITVEDLFYNIS 120
Query: 430 TRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE-NLADIRTNVNSSHSEVIGNI 488
TRRKALK P+EE+ KI DVV +YA+HN V FTLKK E AD+RT + + + I
Sbjct: 121 TRRKALKSPAEEHAKIVDVVGKYAIHNSGVSFTLKKHGETTAADVRTAAGGTRIDAVRAI 180
Query: 489 YGNNISRRV 497
YG ++R +
Sbjct: 181 YGAQVAREL 189
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL ++GT+ L V G ++N ++S + TF+ FIN+ I++ IE VY+ YLPK
Sbjct: 188 ELLELDGTEPKLDLVVKGLVSNADYSMPRGTFIFFINHRLVDCPSIRKAIETVYAAYLPK 247
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+FPFVYLSL M +NVDVN+HPTK EVHFLHED ++E VQ MLE LLGSN SR FYTQ
Sbjct: 248 KTFPFVYLSLLMPGQNVDVNIHPTKKEVHFLHEDVVVETVQKMLEAKLLGSNASRTFYTQ 307
Query: 313 S 313
+
Sbjct: 308 A 308
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 68/79 (86%)
Query: 48 VTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASIS 107
++VK GG+KL+QI DNG+GI +D+D+VCER TTSKL +F+DL SI+TFGFRGEALAS++
Sbjct: 1 MSVKAGGMKLMQIADNGSGIHLDDLDLVCERHTTSKLERFDDLKSIATFGFRGEALASVT 60
Query: 108 HVAHLTIITKTKTSPCAYR 126
VAH++II+KT + CAY+
Sbjct: 61 RVAHVSIISKTADAKCAYK 79
>gi|392562456|gb|EIW55636.1| DNA mismatch repair protein MutL [Trametes versicolor FP-101664
SS1]
Length = 770
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 150/227 (66%), Gaps = 14/227 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + S +TSI+VTVK+GG+KLLQIQDNG GIRKED+ I+ E
Sbjct: 36 IIHRPASALKELIENS-----LDAGATSIKVTVKEGGMKLLQIQDNGCGIRKEDLPILAE 90
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL F DL+ ++T+GFRGEALASIS+V++LT++TKTK CA++A Y D L
Sbjct: 91 RFTTSKLATFADLSRLTTYGFRGEALASISYVSNLTVVTKTKADSCAWKACYADGALTPV 150
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
DP KPCAGN GT I E+LFYN PTR AL+ SEEY +I DVV+RYAVHNP V
Sbjct: 151 KAGASSDP-KPCAGNDGTTITVENLFYNTPTRLSALRGSSEEYTRILDVVTRYAVHNPLV 209
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
FT KK D+ T +S+ + I +YG +++ + S + S
Sbjct: 210 SFTCKKTGSPSPDVSTPSSSTTEQAIRLLYGQTLAKELLHVSVSPSS 256
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 105/119 (88%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L E+V+NRIAAGE+I RPA+ALKEL+ENSLDA +TSI+VTVK+GG+KLLQIQDNG GIRK
Sbjct: 23 LQESVINRIAAGEIIHRPASALKELIENSLDAGATSIKVTVKEGGMKLLQIQDNGCGIRK 82
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWC 128
ED+ I+ ERFTTSKL F DL+ ++T+GFRGEALASIS+V++LT++TKTK CA++ C
Sbjct: 83 EDLPILAERFTTSKLATFADLSRLTTYGFRGEALASISYVSNLTVVTKTKADSCAWKAC 141
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Query: 218 ITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
TN N+ KKMTFLLFIN+ IKR +E VY+ L KG+ PFVYLSL +DP++VDV
Sbjct: 287 FTNANYQAKKMTFLLFINHRLVEASRIKRALEAVYNGVLAKGAAPFVYLSLQIDPRSVDV 346
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTK EVHFL ED IIER+ +++ L+G + SRVF Q+
Sbjct: 347 NVHPTKKEVHFLDEDAIIERIADVVQDALIGQSQSRVFEYQT 388
>gi|238584720|ref|XP_002390649.1| hypothetical protein MPER_10039 [Moniliophthora perniciosa FA553]
gi|215454304|gb|EEB91579.1| hypothetical protein MPER_10039 [Moniliophthora perniciosa FA553]
Length = 481
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 140/193 (72%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+VTVK+GGLKLLQIQD+G GIRK D+ I+ ERFTTSKL+ F DL+ ++T+GFRGEA
Sbjct: 1 ATSIRVTVKEGGLKLLQIQDHGCGIRKSDLPILAERFTTSKLSSFSDLSRLTTYGFRGEA 60
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHL++ITKT++ CAY+A Y D KL +P KPCAGN GT I+ EDL
Sbjct: 61 LASISHVAHLSVITKTRSETCAYKAQYSDGKLVPAQVGHTAEP-KPCAGNDGTTIVIEDL 119
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F+N PTR AL+ SEEY++I DV+++YA+HN V F KK D+ T NS S+
Sbjct: 120 FFNTPTRLSALRNTSEEYSRILDVMTKYAIHNSKVSFMCKKAGSGTPDLSTVSNSQTSQA 179
Query: 485 IGNIYGNNISRRV 497
I +YG+ I + +
Sbjct: 180 IRTLYGHAIEKEL 192
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 75/84 (89%)
Query: 43 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 102
+TSI+VTVK+GGLKLLQIQD+G GIRK D+ I+ ERFTTSKL+ F DL+ ++T+GFRGEA
Sbjct: 1 ATSIRVTVKEGGLKLLQIQDHGCGIRKSDLPILAERFTTSKLSSFSDLSRLTTYGFRGEA 60
Query: 103 LASISHVAHLTIITKTKTSPCAYR 126
LASISHVAHL++ITKT++ CAY+
Sbjct: 61 LASISHVAHLSVITKTRSETCAYK 84
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 89/164 (54%), Gaps = 32/164 (19%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINNP------------IKRMIEQVYSIYLPKGS 254
D+++ +V + TN N+ KK FLLFIN IKR +E VY+ LP+G+
Sbjct: 206 DESWTAEV--FFTNANYQAKKTVFLLFINRKYHWVTHHLESTRIKRALEAVYNGILPRGA 263
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
FPF+YLSL +DP+ VDVNVHPTK EVHFL+E+ I E++ +++ L + SR Q
Sbjct: 264 FPFLYLSLNIDPRAVDVNVHPTKKEVHFLNEEHITEQICDNIQEKLAEKSHSRALEYQ-- 321
Query: 315 SIQVTVKQGGLKLLQIQDNGTGIRK-------EDMDIVCERFTT 351
T+ GG ++GT K ED D V E TT
Sbjct: 322 ----TLLTGGR-----AEDGTKADKKRRNQEDEDKDAVDEEKTT 356
>gi|121713708|ref|XP_001274465.1| DNA mismatch repair protein Mlh1, putative [Aspergillus clavatus
NRRL 1]
gi|119402618|gb|EAW13039.1| DNA mismatch repair protein Mlh1, putative [Aspergillus clavatus
NRRL 1]
Length = 751
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 136/195 (69%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSIEVLVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAEPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K E+ A I T ++ ++ I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGESGAGISTPAAANTTDRI 246
Query: 486 GNIYGNNISRRVRRF 500
I+G+ ++ + F
Sbjct: 247 RQIHGSAVANELVEF 261
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI+V VK GGLKLLQI D
Sbjct: 27 KPKRIRPLDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEVLVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 6/128 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D + +G +TN N+ K+ LLFIN+ IKR +EQ YS +LPK
Sbjct: 257 ELVEFQVEDSKLGFRSSGLVTNANYHVKRTVILLFINHRSVESTAIKRAVEQTYSSFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P VDVNVHPTK EV+FL+ED IIE + S + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPHRVDVNVHPTKREVNFLNEDDIIESICSEIRSKLAQVDSSRTFLTQ 376
Query: 313 STSIQVTV 320
+ VT+
Sbjct: 377 TLLPGVTI 384
>gi|70997465|ref|XP_753480.1| DNA mismatch repair protein Mlh1 [Aspergillus fumigatus Af293]
gi|66851116|gb|EAL91442.1| DNA mismatch repair protein Mlh1, putative [Aspergillus fumigatus
Af293]
gi|159126791|gb|EDP51907.1| DNA mismatch repair protein Mlh1, putative [Aspergillus fumigatus
A1163]
Length = 709
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 135/195 (69%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 16 STSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 75
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 76 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 135
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH + F+ +K E+ A I T +S E I
Sbjct: 136 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGIAFSCRKHGESGAGISTPTAASTVERI 195
Query: 486 GNIYGNNISRRVRRF 500
I+G+ ++ + F
Sbjct: 196 RQIHGSAVANELVEF 210
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 85/98 (86%)
Query: 29 NALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFE 88
+ALKEL+EN++DA STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFE
Sbjct: 2 HALKELIENAVDAGSTSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFE 61
Query: 89 DLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
DL+SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 62 DLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 99
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 7/142 (4%)
Query: 184 VERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------P 237
VER + +++ N EL+ + D + +G +TN N+ K+ T LLFIN+
Sbjct: 192 VERIRQIHGSAVAN-ELVEFQVEDSKLGFRSSGLVTNANYHVKRTTILLFINHRSVESTA 250
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
IKR +EQ YS +LPKG PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + ++
Sbjct: 251 IKRAVEQTYSSFLPKGGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICDAIK 310
Query: 298 KTLLGSNTSRVFYTQSTSIQVT 319
L ++SR F TQ+ VT
Sbjct: 311 SKLAQVDSSRTFLTQTLLPGVT 332
>gi|301153985|gb|ADK66306.1| mismatch repair protein MLH1 [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 205/347 (59%), Gaps = 36/347 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+ P I++L+E+VVNRIAAGE+IQR ++A+++L+ENS+DA S++I VTVK GG KL+Q+ D
Sbjct: 16 ESPHIRRLEESVVNRIAAGEMIQRTSSAVQDLVENSIDADSSTISVTVKDGGPKLIQVSD 75
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI-------- 114
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+
Sbjct: 76 DGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 135
Query: 115 ----------ITKTKTSPCA-YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYR 163
+ + PCA + + + + ++ + LQ + +
Sbjct: 136 HGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRF 195
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNL-------ELLSVEGTDDAFQ---L 212
V H V ++ + V + ++ N+ +L+ ++ +D+
Sbjct: 196 AVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGASVVRDLMEIQVSDENAVDEIF 255
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G+I+N N+ KK T +LFIN+ +KR E VYS LP+ S PF+Y+S+ + P
Sbjct: 256 KMDGFISNANYVAKKTTMILFINDRLVDCTSLKRATEFVYSAILPQASKPFIYMSINLPP 315
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
++VDVN+HPTK EV L+++ IIE+++ +E+ L+ N +R+F TQ+
Sbjct: 316 EHVDVNIHPTKKEVSLLNQERIIEKIKDAIEEKLVNCNNTRIFQTQA 362
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 135/196 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S++I VTVK GG KL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 56 SSTISVTVKDGGPKLIQVSDDGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 115
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQI+ E+LFYN+ RR
Sbjct: 116 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARR 175
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I N+YG +
Sbjct: 176 KTLQNSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGAS 235
Query: 493 ISRRVRRFSSASQSAL 508
+ R + + ++A+
Sbjct: 236 VVRDLMEIQVSDENAV 251
>gi|301120306|ref|XP_002907880.1| DNA mismatch repair protein, putative [Phytophthora infestans
T30-4]
gi|262102911|gb|EEY60963.1| DNA mismatch repair protein, putative [Phytophthora infestans
T30-4]
Length = 776
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 141/207 (68%), Gaps = 11/207 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ V V QGGLKLLQIQDNG GI+++D++IVCERFTTSKL FEDL I +FGFRGEA
Sbjct: 43 ATNVAVAVSQGGLKLLQIQDNGRGIQRQDLEIVCERFTTSKLKSFEDLKDIKSFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAH++I ++T PCAY+ASY D KL DP KPCAG GTQI+ EDL
Sbjct: 103 LASISHVAHVSITSRTADQPCAYKASYRDGKLVSKRPGESNDP-KPCAGKNGTQIVVEDL 161
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSHS 482
FYN+ TR++ALK SE+Y +I DVV +YA+H VGF KK E+ + T +SS
Sbjct: 162 FYNLSTRKQALKNTSEQYTRILDVVQKYAIHFGAKGVGFVCKKHRESSCGVNTTQSSSQL 221
Query: 483 EVIGNIYGNNISRRVRRFSSASQSALA 509
+ I IYG+ ++ + F + A
Sbjct: 222 DAIRTIYGSKLASELNPFEHVRDATAA 248
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 105/126 (83%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I++L VVNRIAAGEV+ RPANA+KELLENSLDA +T++ V V QGGLKLLQI
Sbjct: 1 MPPAPRIQRLSPDVVNRIAAGEVVHRPANAVKELLENSLDAGATNVAVAVSQGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG GI+++D++IVCERFTTSKL FEDL I +FGFRGEALASISHVAH++I ++T
Sbjct: 61 QDNGRGIQRQDLEIVCERFTTSKLKSFEDLKDIKSFGFRGEALASISHVAHVSITSRTAD 120
Query: 121 SPCAYR 126
PCAY+
Sbjct: 121 QPCAYK 126
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
Q +V G+I+N N+ KK F+LFIN+ +KR E VYS+YLPK + PF+YLS+
Sbjct: 253 LQRQVRGYISNANYHLKKSNFILFINDRLVECPSLKRACEYVYSLYLPKNTHPFIYLSME 312
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
+ P+N+DVNVHPTK EVHFLHE+ I++ + +EK L GSN SR F Q + + V G
Sbjct: 313 LPPRNIDVNVHPTKREVHFLHEEDIVDSISQAIEKQLKGSNESRSFSVQPITAILGVSNG 372
>gi|410076666|ref|XP_003955915.1| hypothetical protein KAFR_0B04840 [Kazachstania africana CBS 2517]
gi|372462498|emb|CCF56780.1| hypothetical protein KAFR_0B04840 [Kazachstania africana CBS 2517]
Length = 780
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 210/354 (59%), Gaps = 41/354 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I++LD +VVN+IAAGE+I P NALKELLENS+DAK+T+I V VK GG+KLLQI
Sbjct: 1 MAAIPQIRRLDPSVVNKIAAGEIIISPVNALKELLENSIDAKATNIDVLVKDGGIKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K D+ I+CERFTTSKL F+DL ++T+GFRGEALASISH+A LTI+TKT+T
Sbjct: 61 ADNGCGINKSDLPILCERFTTSKLETFDDLQKLNTYGFRGEALASISHIARLTIVTKTET 120
Query: 121 SPC----AYRWCTYLADLMALA-------LMEMSQYLQRDKEQIGDKEEKQWYRTVE--- 166
C AY L + +A L+E Y + + +++ + ++
Sbjct: 121 EKCAWKVAYSQGKMLNEPSPVAGKTGTSILIEDLFYNIPSRLRSLKSPSEEYNKILDVIG 180
Query: 167 ----------HTLVPLMKSQY----QPSEKIVERACLLEIASL-NNLELLSVEGTDDAFQ 211
+L SQ+ + + I ER + S+ +NL L ++ ++
Sbjct: 181 RYAIHSQNIGFSLKKFGDSQFHLMLRSNLTITERIRTVYSNSVASNLIFLELDPVENLNF 240
Query: 212 LKVTGWITNVNF---STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP---FVY 259
K+ G+++++N+ + K + + FIN P+KR + VYS Y+PK S F+Y
Sbjct: 241 TKIEGYVSDLNYYVSNKKSIQPIFFINERLVTCEPLKRALFHVYSNYMPKSSSSSKPFLY 300
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
++ +DPK +DVN+HPTK EV FL++ IIE++ L + L +TS++F T +
Sbjct: 301 FNILIDPKTIDVNIHPTKKEVRFLNQTEIIEKISMFLHEKLATIDTSKLFKTST 354
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 135/183 (73%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+I V VK GG+KLLQI DNG GI K D+ I+CERFTTSKL F+DL ++T+GFRGE
Sbjct: 42 KATNIDVLVKDGGIKLLQIADNGCGINKSDLPILCERFTTSKLETFDDLQKLNTYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH+A LTI+TKT+T CA++ +Y K+ + P AG GT I+ EDLFYNIP+R
Sbjct: 102 ALASISHIARLTIVTKTETEKCAWKVAYSQGKMLNEPSPVAGKTGTSILIEDLFYNIPSR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
++LK PSEEYNKI DV+ RYA+H+ ++GF+LKK ++ + N + +E I +Y N
Sbjct: 162 LRSLKSPSEEYNKILDVIGRYAIHSQNIGFSLKKFGDSQFHLMLRSNLTITERIRTVYSN 221
Query: 492 NIS 494
+++
Sbjct: 222 SVA 224
>gi|400202057|gb|AFP73612.1| mutL-like protein 1 [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 204/347 (58%), Gaps = 36/347 (10%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+ P I++L+E+VVNRIAAGE+IQR ++A+++L+ENS+DA S++I VTVK GG KL+Q+ D
Sbjct: 16 ESPHIRRLEESVVNRIAAGEMIQRTSSAVQDLVENSIDADSSTISVTVKDGGPKLIQVSD 75
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI-------- 114
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+
Sbjct: 76 DGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 135
Query: 115 ----------ITKTKTSPCA-YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYR 163
+ + PCA + + + + ++ + LQ + +
Sbjct: 136 HGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRF 195
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNL-------ELLSVEGTDDAFQ---L 212
V H V ++ + V + ++ N+ +L+ ++ +D+
Sbjct: 196 AVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGASVVRDLMEIQVSDENAVDEIF 255
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K+ G+I+N N+ KK T +LFIN+ +KR E VYS LP+ S PF+Y+S+ + P
Sbjct: 256 KMDGFISNANYVAKKTTMILFINDRLVDCTSLKRATEFVYSAILPQASKPFIYMSINLPP 315
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ VDVN+HPTK EV L+++ IIE+++ +E+ L+ N +R+F TQ+
Sbjct: 316 EPVDVNIHPTKKEVSLLNQERIIEKIKDAIEEKLVNCNNTRIFQTQA 362
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 135/196 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S++I VTVK GG KL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 56 SSTISVTVKDGGPKLIQVSDDGHGIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEA 115
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQI+ E+LFYN+ RR
Sbjct: 116 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARR 175
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I N+YG +
Sbjct: 176 KTLQNSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSGSTSSRLDAIRNVYGAS 235
Query: 493 ISRRVRRFSSASQSAL 508
+ R + + ++A+
Sbjct: 236 VVRDLMEIQVSDENAV 251
>gi|317150427|ref|XP_001824017.2| DNA mismatch repair protein Mlh1 [Aspergillus oryzae RIB40]
Length = 727
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 135/190 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+AHLT+ TKT S CA+RA Y + KL K AG GTQI EDLFYN+PTRR
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSNGKLPAAPKATAGRGGTQITVEDLFYNVPTRR 186
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+A + SEEY KI DVV RYAVH V F+ +K ++ I T V ++ + I I+G+
Sbjct: 187 RAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDSGVSISTPVTANTIDRIRQIHGSA 246
Query: 493 ISRRVRRFSS 502
++ + F S
Sbjct: 247 VANELVEFKS 256
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI D
Sbjct: 27 KPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D + +G++TN N+ K+ LLFIN+ +KR IEQ YS +LPK
Sbjct: 250 ELVEFKSEDRKLGFRSSGYVTNANYHVKRTVILLFINHRSVESTAVKRAIEQTYSSFLPK 309
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF Y+ L ++P VDVNVHPTK EV+FL+ED IIE + ++ L ++SR F TQ
Sbjct: 310 GGHPFAYIDLEIEPHRVDVNVHPTKREVNFLNEDEIIECICQEIKSNLTQVDSSRTFLTQ 369
Query: 313 S 313
+
Sbjct: 370 T 370
>gi|90192345|gb|ABD91835.1| mlh1 [Vermamoeba vermiformis]
Length = 210
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 131/170 (77%), Gaps = 8/170 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I++ VK GG+K+LQIQDNG GI+KED+ IVCER+TTSKL +FEDL I+TFGFRGEA
Sbjct: 38 ATNIRIVVKGGGIKMLQIQDNGCGIKKEDLPIVCERWTTSKLEKFEDLKKITTFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISH+AH+ I+T T S CAYRA Y D K+ DP KPCAG +GTQI ED+F
Sbjct: 98 LASISHIAHVQIVTMTADSTCAYRAYYQDGKMVGKNGESADP-KPCAGVKGTQITVEDMF 156
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
YN+ +R+KALKQP++EY KI DVV++YA+HN F LKK EN +D+ T
Sbjct: 157 YNVTSRQKALKQPNDEYLKIVDVVTKYALHNYTASFNLKKMGENTSDVHT 206
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 105/121 (86%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IKKLD TVVNRIAAGEVI RPANA+KE++EN LDA +T+I++ VK GG+K+LQIQDNG
Sbjct: 1 RIKKLDPTVVNRIAAGEVIHRPANAIKEMMENCLDAGATNIRIVVKGGGIKMLQIQDNGC 60
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+KED+ IVCER+TTSKL +FEDL I+TFGFRGEALASISH+AH+ I+T T S CAY
Sbjct: 61 GIKKEDLPIVCERWTTSKLEKFEDLKKITTFGFRGEALASISHIAHVQIVTMTADSTCAY 120
Query: 126 R 126
R
Sbjct: 121 R 121
>gi|119478992|ref|XP_001259525.1| DNA mismatch repair protein Mlh1, putative [Neosartorya fischeri
NRRL 181]
gi|119407679|gb|EAW17628.1| DNA mismatch repair protein Mlh1, putative [Neosartorya fischeri
NRRL 181]
Length = 759
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 135/195 (69%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSIEVLVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH + F+ +K E+ A I T ++ + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGIAFSCRKHGESGAGISTPAAANTVDRI 246
Query: 486 GNIYGNNISRRVRRF 500
I+G+ ++ + F
Sbjct: 247 RQIHGSAVANELVEF 261
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI+V VK GGLKLLQI D
Sbjct: 27 KPKRIRPLDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEVLVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D + +G +TN N+ K+ T LLFIN+ IKR +EQ YS +LPK
Sbjct: 257 ELVEFQIEDSKLGFRSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYSSFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICDEIRSKLARVDSSRTFLTQ 376
Query: 313 STSIQVT 319
+ VT
Sbjct: 377 TLLPGVT 383
>gi|212529290|ref|XP_002144802.1| DNA mismatch repair protein Mlh1, putative [Talaromyces marneffei
ATCC 18224]
gi|111380655|gb|ABH09704.1| MLH1-like protein [Talaromyces marneffei]
gi|210074200|gb|EEA28287.1| DNA mismatch repair protein Mlh1, putative [Talaromyces marneffei
ATCC 18224]
Length = 759
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG GI +D+ I+CERFTTSKL +FEDL +I T+GFRGEA
Sbjct: 68 STSIEVLVKDGGLKLLQITDNGHGINVDDLPILCERFTTSKLKEFEDLTAIGTYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISH++HLT+ TKT +S CA+RA Y D KL KP AG GTQI EDLF
Sbjct: 128 LASISHISHLTVTTKTASSSCAWRAHYSDGKLVPAKPGQSAKPKPTAGRGGTQITVEDLF 187
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH +V F+ KK ++ + I T SS + I
Sbjct: 188 YNVPTRRRAFRSSSEEYAKILDVVGRYAVHCANVAFSCKKHGDSGSSISTAAKSSTIDRI 247
Query: 486 GNIYGNNISRRVRRFSSASQSALARKA 512
I+G+ ++ + F+ L KA
Sbjct: 248 RQIHGSAVANELIEFNVEDTKRLGFKA 274
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 101/121 (83%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P +ALKEL+ENS+DA STSI+V VK GGLKLLQI DNG
Sbjct: 31 RIRALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGSTSIEVLVKDGGLKLLQITDNGH 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL +FEDL +I T+GFRGEALASISH++HLT+ TKT +S CA+
Sbjct: 91 GINVDDLPILCERFTTSKLKEFEDLTAIGTYGFRGEALASISHISHLTVTTKTASSSCAW 150
Query: 126 R 126
R
Sbjct: 151 R 151
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 193 ASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVY 246
A N L +VE T K +G +TN N+ K+ T LLFIN+ +K+ IEQ Y
Sbjct: 254 AVANELIEFNVEDTK-RLGFKASGLVTNANYHVKRTTILLFINHRSVESSALKKSIEQTY 312
Query: 247 SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
S +LPKG PF+YL L ++P VDVNVHPTK EV+FL+ED IIE + S + L ++S
Sbjct: 313 STFLPKGGHPFIYLDLEIEPNRVDVNVHPTKREVNFLNEDEIIESICSEITTRLAQVDSS 372
Query: 307 RVFYTQS 313
R F TQ+
Sbjct: 373 RTFMTQT 379
>gi|299740046|ref|XP_001840436.2| DNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298404060|gb|EAU81492.2| DNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 778
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 146/218 (66%), Gaps = 14/218 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + S STSI+VTVK GGLKLLQIQDNG GIRK D+ I+ E
Sbjct: 27 IIHRPASALKELIENS-----LDAGSTSIKVTVKDGGLKLLQIQDNGCGIRKSDLPILAE 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL+ F DL I+T+GFRGEALASISHVA L+++TKTK CA++A Y+D L
Sbjct: 82 RFTTSKLSSFSDLQKIATYGFRGEALASISHVARLSVVTKTKKESCAWKAHYLDGALVSS 141
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
+P +PCAGN GT II E+LFYN PTR AL+ SEEY +I DV+++YA+HNP V
Sbjct: 142 KPGRPAEP-EPCAGNDGTTIIVENLFYNTPTRLSALRNNSEEYARILDVMTKYAIHNPKV 200
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F KK ++ T NS + I +YG++I++ +
Sbjct: 201 SFMCKKSGSGSPELSTPPNSDTPQSIRLLYGHSIAKEL 238
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 107/124 (86%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P IKKLD+T++NRIAAGE+I RPA+ALKEL+ENSLDA STSI+VTVK GGLKLLQIQD
Sbjct: 7 EPRPIKKLDKTLINRIAAGEIIHRPASALKELIENSLDAGSTSIKVTVKDGGLKLLQIQD 66
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GIRK D+ I+ ERFTTSKL+ F DL I+T+GFRGEALASISHVA L+++TKTK
Sbjct: 67 NGCGIRKSDLPILAERFTTSKLSSFSDLQKIATYGFRGEALASISHVARLSVVTKTKKES 126
Query: 123 CAYR 126
CA++
Sbjct: 127 CAWK 130
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 217 WITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ TN N+ KK FLLFIN+ + KR +E Y LPKG+ PFVYLSL +DPKNVD
Sbjct: 275 YFTNPNYQAKKFNFLLFINHRMVESPRMKRALEAAYHSILPKGASPFVYLSLEIDPKNVD 334
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VNVHPTK EVHFL+E+ I +R+ S ++KTL +SR F Q+
Sbjct: 335 VNVHPTKREVHFLYEEEITDRICSAVQKTLSAKASSRSFEYQT 377
>gi|402216406|gb|EJT96510.1| DNA mismatch repair protein MutL [Dacryopinax sp. DJM-731 SS1]
Length = 731
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T K GGLKLLQI DNG+GIR+ D+ ++ RF TSKL+ F DL+ + T+GFRGEA
Sbjct: 47 ATQIKITAKDGGLKLLQIVDNGSGIRRADLPLLAARFCTSKLSTFSDLSKLQTYGFRGEA 106
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHL ++TKT+ CA+RASY D L DP KPCAGN GT I EDL
Sbjct: 107 LASISHVAHLNVVTKTRDDSCAWRASYSDGLLAPAKAGTSADP-KPCAGNDGTTITVEDL 165
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN P R +ALK PS+EY +I DVV RYA+HNP V F KK N AD+ T + +
Sbjct: 166 FYNTPLRLRALKSPSDEYARILDVVQRYAIHNPSVSFLCKKTGSNTADVSTPSSGTVKSA 225
Query: 485 IGNIYGNNISRRV 497
I IYG ++++ +
Sbjct: 226 IQTIYGPSVAKEL 238
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L+E+++NRIAAGE+I RPANALKELLEN+LDA +T I++T K GGLKLLQI DN
Sbjct: 8 PKPIHRLEESLINRIAAGEIIHRPANALKELLENALDAGATQIKITAKDGGLKLLQIVDN 67
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GIR+ D+ ++ RF TSKL+ F DL+ + T+GFRGEALASISHVAHL ++TKT+ C
Sbjct: 68 GSGIRRADLPLLAARFCTSKLSTFSDLSKLQTYGFRGEALASISHVAHLNVVTKTRDDSC 127
Query: 124 AYRWCTYLADLMALA 138
A+R +Y L+A A
Sbjct: 128 AWR-ASYSDGLLAPA 141
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 8/146 (5%)
Query: 198 LELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLP 251
LE + GT D F+ + W T+ N+ KK TFLLFIN+ +KR +E VYS LP
Sbjct: 239 LEAQAEAGTKDEFEWQAEAWFTSANYHAKKPTFLLFINHRSVESARVKRAVEAVYSGILP 298
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
KG+ F+YLSL +DP VDVNVHPTK EVHFL E+ I E+V ++ L ++ SR F
Sbjct: 299 KGACGFIYLSLDIDPSKVDVNVHPTKREVHFLEEEAITEKVADSMQAVLAANDQSRTFQY 358
Query: 312 QS--TSIQVTVKQGGLKLLQIQDNGT 335
Q+ T QG +K +Q T
Sbjct: 359 QTVLTGHSPFKSQGKMKRSDLQKERT 384
>gi|317037205|ref|XP_001398763.2| DNA mismatch repair protein Mlh1 [Aspergillus niger CBS 513.88]
Length = 723
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 135/189 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+AHLT+ TKT S CA+RA Y D KL K AG GTQI EDLFYN+PTRR
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLSAAPKATAGRGGTQITVEDLFYNVPTRR 186
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+A + SEEY KI DVV RY+VH V F+ +K ++ + T ++ + I I+G+
Sbjct: 187 RAFRSASEEYAKILDVVGRYSVHCSGVAFSCRKHGDSGVSVSTPAAANTIDRIRQIHGSA 246
Query: 493 ISRRVRRFS 501
++ + +F+
Sbjct: 247 VANELVKFN 255
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK GGLKLLQI D
Sbjct: 27 RPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ + +G+ TN N+ K+ T LLFIN+ IKR +EQ YS +LPK
Sbjct: 250 ELVKFNVEDEKLGFRSSGFATNANYHVKRTTILLFINHRSVESTAIKRAVEQTYSSFLPK 309
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 310 GGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQ 369
Query: 313 STSIQVTVKQ 322
+ VT +
Sbjct: 370 TLLPGVTTME 379
>gi|402219150|gb|EJT99224.1| hypothetical protein DACRYDRAFT_109945 [Dacryopinax sp. DJM-731
SS1]
Length = 630
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 197/389 (50%), Gaps = 81/389 (20%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L+E+++NRIAAGE+I RPANALKELLEN+LDA +T I++T K GGLKLLQI DN
Sbjct: 8 PKPIHRLEESLINRIAAGEIIHRPANALKELLENALDAGATQIKITAKDGGLKLLQIVDN 67
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK---- 119
G+GIR+ D+ ++ RF TSKL+ F DL+ + T+GFRGEALASISHVAHL ++TKT+
Sbjct: 68 GSGIRRADLPLLAARFCTSKLSTFSDLSKLQTYGFRGEALASISHVAHLNVVTKTREDSC 127
Query: 120 ---------------------TSPCAYRWCTYLA-------------------DLMALAL 139
PCA T +A D A L
Sbjct: 128 AWRASYSDGLLAPAKAGTSADPKPCAGNDGTTIAVEDIFYNIPLGLRALKSPSDEYARIL 187
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLM--KSQYQ----------PSEKIVERA 187
+ +Y + K + +E YR +PL+ S YQ PS + V+ A
Sbjct: 188 DVVQRYAIQPKRLLPVQEGMSSYR------LPLLVLNSTYQTGSNTADVSTPSSRTVKSA 241
Query: 188 CLLEIASLNNLELLSVE---GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPIKRMIEQ 244
ELL + G +D F+ + W+ + N+ KK FLLFIN + +
Sbjct: 242 IKTIYGPNVAKELLEAQAEAGPEDEFEWQAEAWLISANYHAKKPAFLLFINQSARLGLA- 300
Query: 245 VYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
SL +DP VDVNVHPTK EVHFL E+ I ++V ++ L +
Sbjct: 301 -------------FRASLDIDPSKVDVNVHPTKREVHFLDEEAITQKVADSMQVVLAANA 347
Query: 305 TSRVFYTQS--TSIQVTVKQGGLKLLQIQ 331
SR F Q+ T + QG +K + ++
Sbjct: 348 QSRTFQYQTVLTGHRPFKSQGKMKRIDLR 376
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 25/209 (11%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T K GGLKLLQI DNG+GIR+ D+ ++ RF TSKL+ F DL+ + T+GFRGEA
Sbjct: 47 ATQIKITAKDGGLKLLQIVDNGSGIRRADLPLLAARFCTSKLSTFSDLSKLQTYGFRGEA 106
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHL ++TKT+ CA+RASY D L DP KPCAGN GT I ED+
Sbjct: 107 LASISHVAHLNVVTKTREDSCAWRASYSDGLLAPAKAGTSADP-KPCAGNDGTTIAVEDI 165
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV--------GFTLK--------KQNE 468
FYNIP +ALK PS+EY +I DVV RYA+ + + L +
Sbjct: 166 FYNIPLGLRALKSPSDEYARILDVVQRYAIQPKRLLPVQEGMSSYRLPLLVLNSTYQTGS 225
Query: 469 NLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N AD+ T + + I IYG N+++ +
Sbjct: 226 NTADVSTPSSRTVKSAIKTIYGPNVAKEL 254
>gi|242763863|ref|XP_002340659.1| DNA mismatch repair protein Mlh1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723855|gb|EED23272.1| DNA mismatch repair protein Mlh1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 764
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL +FEDL +I T+GFRGEA
Sbjct: 68 STSIEILVKDGGLKLLQITDNGHGINVDDLPILCERFTTSKLREFEDLTAIGTYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAEDLF 425
LASISH++HLT+ TKT +S CA+RA Y D KL KP AG GTQI EDLF
Sbjct: 128 LASISHISHLTVTTKTASSSCAWRAHYSDGKLVPAKPSQSAKPKPTAGRGGTQITVEDLF 187
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH +V F+ KK ++ + I T SS + I
Sbjct: 188 YNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSNVAFSCKKHGDSGSSIATTAKSSTIDRI 247
Query: 486 GNIYGNNISRRVRRFSSASQSALARKA 512
I+G++++ + F+ L KA
Sbjct: 248 RQIHGSSVANELIDFNIEDTKRLGFKA 274
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 101/121 (83%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P +ALKEL+ENS+DA STSI++ VK GGLKLLQI DNG
Sbjct: 31 RIRALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGSTSIEILVKDGGLKLLQITDNGH 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ I+CERFTTSKL +FEDL +I T+GFRGEALASISH++HLT+ TKT +S CA+
Sbjct: 91 GINVDDLPILCERFTTSKLREFEDLTAIGTYGFRGEALASISHISHLTVTTKTASSSCAW 150
Query: 126 R 126
R
Sbjct: 151 R 151
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K +G +TN N+ K+ T LLFIN+ +K+ IEQ YS +LPKG PF+YL L ++
Sbjct: 272 FKASGLVTNANYHVKRTTILLFINHRSVESSALKKAIEQTYSTFLPKGGHPFIYLDLEIE 331
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P VDVNVHPTK EV+FL+ED IIE + S + L ++SR F TQ+
Sbjct: 332 PNRVDVNVHPTKREVNFLNEDEIIESICSEITTRLAQVDSSRTFMTQT 379
>gi|320037401|gb|EFW19338.1| DNA mismatch repair protein mutL [Coccidioides posadasii str.
Silveira]
Length = 777
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++++ VK GGLKLLQI DNG GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 65 ATAVEILVKDGGLKLLQITDNGHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y D KL +P KP AG GTQI EDL
Sbjct: 125 LASISHIAHLTVTTKTAGSSCAWRAHYRDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDL 183
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI D+V RYAVH V F+ KK ++ + T VNSS +
Sbjct: 184 FYNVPTRRRAFRSASEEYAKILDIVGRYAVHCNGVSFSCKKHGDSGVSVSTPVNSSTIDR 243
Query: 485 IGNIYGNNISRRVRRFSSASQSALARKA 512
I I+G+ ++ + F SAL +A
Sbjct: 244 IRQIHGSAVANELIPF-DVEDSALGFRA 270
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 102/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +T++++ VK GGLKLLQI DN
Sbjct: 26 PRKIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATAVEILVKDGGLKLLQITDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 86 GHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSC 145
Query: 124 AYR 126
A+R
Sbjct: 146 AWR 148
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D A + +G+ +N N+ K+ LLFIN+ I++ +EQ YS +LPK
Sbjct: 255 ELIPFDVEDSALGFRASGFASNANYHAKRTVILLFINHRSVESSGIRKAMEQTYSAFLPK 314
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL++ ++P VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 315 GGHPFAYLNIEIEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVDSSRTFMTQ 374
Query: 313 S 313
+
Sbjct: 375 T 375
>gi|119174382|ref|XP_001239552.1| hypothetical protein CIMG_09173 [Coccidioides immitis RS]
Length = 775
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++++ VK GGLKLLQI DNG GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 65 ATAVEILVKDGGLKLLQITDNGHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y D KL +P KP AG GTQI EDL
Sbjct: 125 LASISHIAHLTVTTKTAGSSCAWRAHYRDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDL 183
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI D+V RYAVH V F+ KK ++ + T VNSS +
Sbjct: 184 FYNVPTRRRAFRSASEEYAKILDIVGRYAVHCNGVSFSCKKHGDSGVSVSTPVNSSTIDR 243
Query: 485 IGNIYGNNISRRVRRFSSASQSALARKA 512
I I+G+ ++ + F SAL +A
Sbjct: 244 IRQIHGSAVANELIPF-DVEDSALGFRA 270
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 102/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +T++++ VK GGLKLLQI DN
Sbjct: 26 PRKIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATAVEILVKDGGLKLLQITDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 86 GHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSC 145
Query: 124 AYR 126
A+R
Sbjct: 146 AWR 148
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D A + +G+ +N N+ K+ LLFIN+ I++ +EQ YS +LPK
Sbjct: 255 ELIPFDVEDSALGFRASGFASNANYHAKRTVILLFINHRSVESSGIRKAVEQTYSAFLPK 314
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL++ ++P VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 315 GGHPFAYLNIEIEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVDSSRTFMTQ 374
Query: 313 S 313
+
Sbjct: 375 T 375
>gi|67515689|ref|XP_657730.1| hypothetical protein AN0126.2 [Aspergillus nidulans FGSC A4]
gi|40746148|gb|EAA65304.1| hypothetical protein AN0126.2 [Aspergillus nidulans FGSC A4]
gi|259489678|tpe|CBF90147.1| TPA: DNA mismatch repair protein Mlh1, putative (AFU_orthologue;
AFUA_5G11700) [Aspergillus nidulans FGSC A4]
Length = 744
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK+GGLKLLQI DNG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEA
Sbjct: 67 STSIEILVKEGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTADSSCAWRAHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K + I T V + + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDAGVSISTAVALNTIDRI 246
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + FS
Sbjct: 247 RQIHGSAVANELVEFS 262
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK+GGLKLLQI D
Sbjct: 27 KPRKIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSS 146
Query: 123 CAYRWCTYLAD 133
CA W + AD
Sbjct: 147 CA--WRAHYAD 155
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 83/142 (58%), Gaps = 13/142 (9%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ +G +TN N+ K+ T LLFIN+ IKR +EQ Y+ +LPK
Sbjct: 257 ELVEFSVKDEKLGFTSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P +DVNVHPTK EV+FL+ED II+ + + + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQ 376
Query: 313 S--TSIQVTVKQGGLKLLQIQD 332
+ SIQ + Q+QD
Sbjct: 377 TLLPSIQTPKRSS-----QVQD 393
>gi|392869749|gb|EAS28270.2| DNA mismatch repair protein MutL [Coccidioides immitis RS]
Length = 782
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++++ VK GGLKLLQI DNG GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 70 ATAVEILVKDGGLKLLQITDNGHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEA 129
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y D KL +P KP AG GTQI EDL
Sbjct: 130 LASISHIAHLTVTTKTAGSSCAWRAHYRDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDL 188
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI D+V RYAVH V F+ KK ++ + T VNSS +
Sbjct: 189 FYNVPTRRRAFRSASEEYAKILDIVGRYAVHCNGVSFSCKKHGDSGVSVSTPVNSSTIDR 248
Query: 485 IGNIYGNNISRRVRRFSSASQSALARKA 512
I I+G+ ++ + F SAL +A
Sbjct: 249 IRQIHGSAVANELIPF-DVEDSALGFRA 275
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 102/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +T++++ VK GGLKLLQI DN
Sbjct: 31 PRKIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATAVEILVKDGGLKLLQITDN 90
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 91 GHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSC 150
Query: 124 AYR 126
A+R
Sbjct: 151 AWR 153
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D A + +G+ +N N+ K+ LLFIN+ I++ +EQ YS +LPK
Sbjct: 260 ELIPFDVEDSALGFRASGFASNANYHAKRTVILLFINHRSVESSGIRKAVEQTYSAFLPK 319
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL++ ++P VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 320 GGHPFAYLNIEIEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVDSSRTFMTQ 379
Query: 313 S 313
+
Sbjct: 380 T 380
>gi|339252214|ref|XP_003371330.1| DNA mismatch repair protein Mlh1 [Trichinella spiralis]
gi|316968447|gb|EFV52725.1| DNA mismatch repair protein Mlh1 [Trichinella spiralis]
Length = 714
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 192/351 (54%), Gaps = 41/351 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ IK L + V++RIAAGEVI P N +KEL+ENS+DA + I +++ GGLKL++I
Sbjct: 1 MNSTRPIKPLKKCVIDRIAAGEVILSPMNVVKELMENSVDAGANQINISISGGGLKLIRI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG GIR++D +VC+R TSKL F DL +IST GFRGEAL+SI VAH+T+ +KT
Sbjct: 61 QDNGCGIRRDDFPVVCQRHATSKLEDFTDLLNISTLGFRGEALSSICCVAHVTVTSKTLD 120
Query: 121 SPCAYRWCTYLADLM-----ALA-------LMEMSQYLQRDKEQIGDKEEKQWYRTV--- 165
S Y C + + M ALA +E Y ++++ ++W R V
Sbjct: 121 SVVGYE-CRFNGEKMTEPPKALASNQGTVISVENLFYNNPVRQRLMKNSVEEWNRIVDLV 179
Query: 166 ----------------EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDA 209
E + +K+ Q S C S EL++ + T+
Sbjct: 180 AKFAIHFTSIGFSLKREDRNISELKTTTQGSTNEKLATCF---GSSVAKELIAFDCTEPK 236
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
K G I++ ++S+KK T LFINN +KR + +YS YLPK +PF+Y+S+
Sbjct: 237 LGFKAKGLISSTSYSSKKFTLCLFINNRLVECLALKRGFQALYSNYLPKQCYPFIYISME 296
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
+ P VDVN+HPTK E+ F++E I+E + +KTLL + SR F T
Sbjct: 297 ISPHLVDVNLHPTKAEISFMNESDIVENILQAADKTLLAGDKSRSFLAVKT 347
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ I +++ GGLKL++IQDNG GIR++D +VC+R TSKL F DL +IST GFRGEA
Sbjct: 43 ANQINISISGGGLKLIRIQDNGCGIRRDDFPVVCQRHATSKLEDFTDLLNISTLGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SI VAH+T+ +KT S Y + K+ +P K A NQGT I E+LFYN P R+
Sbjct: 103 LSSICCVAHVTVTSKTLDSVVGYECRFNGEKMTEPPKALASNQGTVISVENLFYNNPVRQ 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ +K EE+N+I D+V+++A+H +GF+LK+++ N+++++T S +E + +G++
Sbjct: 163 RLMKNSVEEWNRIVDLVAKFAIHFTSIGFSLKREDRNISELKTTTQGSTNEKLATCFGSS 222
Query: 493 ISRRVRRFSSASQSALARKA 512
+++ + F ++ L KA
Sbjct: 223 VAKELIAF-DCTEPKLGFKA 241
>gi|326480755|gb|EGE04765.1| DNA mismatch repair protein mutL [Trichophyton equinum CBS 127.97]
Length = 725
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 134/190 (70%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 86 STSVEILVREGGLKLLQITDNGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEA 145
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHLT+ TKT S CA+RA Y D KL P KP AG +GTQI EDL
Sbjct: 146 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQNASP-KPIAGRKGTQITVEDL 204
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY K+ D+V RYAVH F+ KK E + T++NSS +
Sbjct: 205 FYNVPTRRRAFRSASEEYAKVLDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDR 264
Query: 485 IGNIYGNNIS 494
I ++G ++
Sbjct: 265 IRQLHGGAVA 274
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI D
Sbjct: 46 RPRKIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITD 105
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S
Sbjct: 106 NGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSS 165
Query: 123 CAYR 126
CA+R
Sbjct: 166 CAWR 169
>gi|255953937|ref|XP_002567721.1| Pc21g06790 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589432|emb|CAP95576.1| Pc21g06790 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 764
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 138/198 (69%), Gaps = 9/198 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS++V +K+GGLKLLQI DNG GI ++D+ I+CERFTTSKL +FEDL SI T+GFRGEA
Sbjct: 69 STSVEVLIKEGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKEFEDLTSIGTYGFRGEA 128
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y D KL P KP AG GTQI EDL
Sbjct: 129 LASISHIAHLTVTTKTAGSSCAWRAHYGDGKLI-PAKPGQNAAPKATAGRGGTQITVEDL 187
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI DVV RYAVH V F+ +K ++ I T V+++ +
Sbjct: 188 FYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDSGVSISTPVSANTIDR 247
Query: 485 IGNIYGNNISRRVRRFSS 502
I I+G+ ++ + F +
Sbjct: 248 IRQIHGSAVANELVEFKT 265
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 99/117 (84%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
LD VVN+IAAGE+I P +ALKEL+EN++DA STS++V +K+GGLKLLQI DNG GI +
Sbjct: 36 LDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSVEVLIKEGGLKLLQITDNGHGIDR 95
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+D+ I+CERFTTSKL +FEDL SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 96 DDLPILCERFTTSKLKEFEDLTSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 152
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D F + +G TN N+ KK LLFIN+ +KR +EQ YS +LPK
Sbjct: 259 ELVEFKTEDMKFGFRASGLATNANYHVKKTVILLFINHRAVESTAVKRAVEQTYSAFLPK 318
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVYL L ++P VDVNVHPTK EV+FL+ED IIE V + + L ++SR F TQ
Sbjct: 319 GGHPFVYLDLEIEPNRVDVNVHPTKREVNFLNEDEIIELVCTEIRSKLAEVDSSRTFLTQ 378
Query: 313 S 313
S
Sbjct: 379 S 379
>gi|344300401|gb|EGW30722.1| hypothetical protein SPAPADRAFT_56707 [Spathaspora passalidarum
NRRL Y-27907]
Length = 665
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 210/356 (58%), Gaps = 44/356 (12%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++P +I+KLD +VVN+IAAGE+I +PANALKE+LENS+DA+ST I++ VK+GGLKLLQI
Sbjct: 1 MEEPRRIQKLDVSVVNKIAAGEIIIQPANALKEMLENSIDAQSTHIEILVKEGGLKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS---ISHVAHLTIITK 117
DNGTGI ED+ ++CERF TSKL +F+DL+SI+T+GFRGEALAS IS ++ +T +
Sbjct: 61 TDNGTGINLEDLPLLCERFATSKLVKFDDLSSIATYGFRGEALASISHISRLSVITKTKE 120
Query: 118 TKTSPCAY----RWCTY----------LADLMALALMEMSQYLQRDKEQIGDKEEKQWYR 163
+ + AY + C +A + ++ + G K + Y
Sbjct: 121 SSVAYKAYYMNGKLCNSNFKGEGQPKPIAGKVGTQIIVEDLFYNIPSRLRGLKSKNDEYG 180
Query: 164 TVEHTLV------------------PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG 205
+ + P+ + +P+ + ER + +++ N ELL V+
Sbjct: 181 KILDIIGRYAIHCGDVGFCCKKYGDPIQQLNTRPNLPLKERIRTVYGSAIAN-ELLEVDT 239
Query: 206 TDDAFQL-KVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPF 257
L K +G ITN N++ KK + ++FIN+ P+KR I V+ +LPK S PF
Sbjct: 240 EYPELGLNKCSGMITNSNYNNKKKIQPVIFINHRLVTCEPLKRAINSVFQFFLPKDSHPF 299
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
Y+SL + P+N+DVN+HPTK EV FL+ED IIE + + + L ++SR F +Q+
Sbjct: 300 FYISLEITPENLDVNIHPTKREVRFLNEDEIIEIIVNNIHSVLSSVDSSRKFKSQT 355
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 135/194 (69%), Gaps = 7/194 (3%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
QST I++ VK+GGLKLLQI DNGTGI ED+ ++CERF TSKL +F+DL+SI+T+GFRG
Sbjct: 41 AQSTHIEILVKEGGLKLLQITDNGTGINLEDLPLLCERFATSKLVKFDDLSSIATYGFRG 100
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-------KDPIKPCAGNQGTQIIAED 423
EALASISH++ L++ITKTK S AY+A Y++ KL + KP AG GTQII ED
Sbjct: 101 EALASISHISRLSVITKTKESSVAYKAYYMNGKLCNSNFKGEGQPKPIAGKVGTQIIVED 160
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYNIP+R + LK ++EY KI D++ RYA+H VGF KK + + + T N E
Sbjct: 161 LFYNIPSRLRGLKSKNDEYGKILDIIGRYAIHCGDVGFCCKKYGDPIQQLNTRPNLPLKE 220
Query: 484 VIGNIYGNNISRRV 497
I +YG+ I+ +
Sbjct: 221 RIRTVYGSAIANEL 234
>gi|258567578|ref|XP_002584533.1| hypothetical protein UREG_05222 [Uncinocarpus reesii 1704]
gi|237905979|gb|EEP80380.1| hypothetical protein UREG_05222 [Uncinocarpus reesii 1704]
Length = 719
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 136/195 (69%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK GGLKLLQI DNG GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 65 ATSVEILVKDGGLKLLQITDNGHGIDHEDLPILCERFTTSKLKAFEDLSSIATYGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL------KDP-IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL + P KP AG GTQI EDLF
Sbjct: 125 LASISHIAHLTVTTKTSGSSCAWRAHYRDGKLVPAKPGQTPGPKPTAGRGGTQITVEDLF 184
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI D+V RYAVH V F+ KK ++ + T SS ++ +
Sbjct: 185 YNVPTRRRAFRSASEEYAKILDIVGRYAVHCDGVSFSCKKHGDSGVSVSTLATSSANDRV 244
Query: 486 GNIYGNNISRRVRRF 500
IYG+ ++ + F
Sbjct: 245 RQIYGSAVANELISF 259
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 102/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA +TS+++ VK GGLKLLQI DN
Sbjct: 26 PRKIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 86 GHGIDHEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTSGSSC 145
Query: 124 AYR 126
A+R
Sbjct: 146 AWR 148
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+S + D + TG +N N K+ T LLFIN+ +++ +EQ YS +LPK
Sbjct: 255 ELISFDVEDSTLGFRATGLASNANHHAKRTTVLLFINHRSVESSAVRKAVEQTYSAFLPK 314
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIE 290
G PF YL L ++P+ VDVN+HPTK EV+FL+ED IIE
Sbjct: 315 GGHPFAYLDLEIEPQRVDVNIHPTKREVNFLNEDEIIE 352
>gi|406605987|emb|CCH42624.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 729
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 142/194 (73%), Gaps = 9/194 (4%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+S+SI+V VK+GG+KLLQI DNG+GI KED+ I+CERFTTSKL+ FEDL+SI+T+GFRGE
Sbjct: 42 KSSSIEVLVKEGGMKLLQITDNGSGIDKEDLPILCERFTTSKLSTFEDLSSIATYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAED 423
ALASISH+AHL++ TKT++S CA++A Y + +L KDP KP AG +GTQI ED
Sbjct: 102 ALASISHIAHLSVTTKTESSACAWKAVYSNGELTPSKPNDTKDP-KPVAGRKGTQITVED 160
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+P+R +ALK S+E+ KI DV+ RYAVH VGF K+ + + T N S E
Sbjct: 161 LFYNVPSRLRALKSSSDEFGKILDVIGRYAVHTDGVGFACKRFGDAHYSLTTRPNVSIKE 220
Query: 484 VIGNIYGNNISRRV 497
I ++G+ I+ +
Sbjct: 221 RIRTVFGSPIANEL 234
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 112/126 (88%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +IK LD +VVN+IAAGE+I PANALKE++ENS+DAKS+SI+V VK+GG+KLLQI
Sbjct: 1 MSTPARIKPLDVSVVNKIAAGEIIIAPANALKEMMENSIDAKSSSIEVLVKEGGMKLLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG+GI KED+ I+CERFTTSKL+ FEDL+SI+T+GFRGEALASISH+AHL++ TKT++
Sbjct: 61 TDNGSGIDKEDLPILCERFTTSKLSTFEDLSSIATYGFRGEALASISHIAHLSVTTKTES 120
Query: 121 SPCAYR 126
S CA++
Sbjct: 121 SACAWK 126
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
LKV G TN NF+ KK + + FINN P+KR + + +LPKG F+YLSL +
Sbjct: 248 LKVAGQFTNPNFNNKKSIQPVFFINNRLVSNDPLKRALTSTVNHFLPKGHKSFIYLSLII 307
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+NVDVNVHPTK EV FL+ED II+R+ +++ ++SR F QS
Sbjct: 308 SPENVDVNVHPTKREVRFLYEDEIIDRICISVQEQFSKIDSSRSFPAQS 356
>gi|303314257|ref|XP_003067137.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106805|gb|EER24992.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 777
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 140/206 (67%), Gaps = 10/206 (4%)
Query: 315 SIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALA 374
++++ VK GGLKLLQI DNG GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALA
Sbjct: 67 AVEILVKDGGLKLLQITDNGHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALA 126
Query: 375 SISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFY 426
SISH+AHLT+ TKT S CA+RA Y D KL +P KP AG GTQI EDLFY
Sbjct: 127 SISHIAHLTVTTKTAGSSCAWRAHYRDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDLFY 185
Query: 427 NIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIG 486
N+PTRR+A + SEEY KI D+V RYAVH V F+ KK ++ + T VNSS + I
Sbjct: 186 NVPTRRRAFRSASEEYAKILDIVGRYAVHCNGVSFSCKKHGDSGVSVSTPVNSSTIDRIR 245
Query: 487 NIYGNNISRRVRRFSSASQSALARKA 512
I+G+ ++ + F SAL +A
Sbjct: 246 QIHGSAVANELIPF-DVEDSALGFRA 270
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 101/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI+ LD VVN+IAAGE+I P +ALKEL+ENS+DA + ++++ VK GGLKLLQI DN
Sbjct: 26 PRKIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGARAVEILVKDGGLKLLQITDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI ED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S C
Sbjct: 86 GHGIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSC 145
Query: 124 AYR 126
A+R
Sbjct: 146 AWR 148
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D A + +G+ +N N+ K+ LLFIN+ I++ +EQ YS +LPK
Sbjct: 255 ELIPFDVEDSALGFRASGFASNANYHAKRTVILLFINHRSVESSGIRKAMEQTYSAFLPK 314
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL++ ++P VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 315 GGHPFAYLNIEIEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVDSSRTFMTQ 374
Query: 313 S 313
+
Sbjct: 375 T 375
>gi|392587870|gb|EIW77203.1| DNA mismatch repair protein MutL [Coniophora puteana RWD-64-598
SS2]
Length = 724
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 143/213 (67%), Gaps = 12/213 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + S +T I+VTVK GG+KLLQIQDNG GIRK D+ ++ E
Sbjct: 35 IIHRPASALKELIENS-----LDAGATFIRVTVKDGGMKLLQIQDNGCGIRKADLPLLAE 89
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT F DL+ I T+GFRGEALASISHVAHL+++TKTK+ A++A Y D L P
Sbjct: 90 RFTTSKLTTFSDLSRIRTYGFRGEALASISHVAHLSVMTKTKSDTAAWKAHYADGALTPP 149
Query: 408 -------IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
KPCAGN GT I E++FYN PTR AL+ SEEY++I DV++RYAVHNP+V
Sbjct: 150 KSGLSPDPKPCAGNDGTTITIENMFYNTPTRLSALRSSSEEYSRILDVMTRYAVHNPNVS 209
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
F+ KK + D+ T NS + I +YG+ I
Sbjct: 210 FSCKKSGVSGQDLSTPSNSDVRQTIRLLYGHAI 242
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 106/127 (83%), Gaps = 2/127 (1%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E+++NRIAAGE+I RPA+ALKEL+ENSLDA +T I+VTVK GG+KLLQIQDNG G
Sbjct: 19 IRRLHESLINRIAAGEIIHRPASALKELIENSLDAGATFIRVTVKDGGMKLLQIQDNGCG 78
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK D+ ++ ERFTTSKLT F DL+ I T+GFRGEALASISHVAHL+++TKTK+ A
Sbjct: 79 IRKADLPLLAERFTTSKLTTFSDLSRIRTYGFRGEALASISHVAHLSVMTKTKSDTAA-- 136
Query: 127 WCTYLAD 133
W + AD
Sbjct: 137 WKAHYAD 143
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 74/116 (63%), Gaps = 12/116 (10%)
Query: 216 GWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+ TN N+ KK TFLLFIN+ IKR +E VYS LPKG PF+YLSL +DP+ V
Sbjct: 274 AYFTNANYQAKKTTFLLFINHRLVESSRIKRALESVYSAILPKGMSPFMYLSLDIDPQAV 333
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGL 325
DVNVHPTK EVHFL+E+ IIE V +++ L G SRVF Q T+ GGL
Sbjct: 334 DVNVHPTKREVHFLNEEAIIENVTDAVQQELAGQTQSRVFQYQ------TLLTGGL 383
>gi|358366704|dbj|GAA83324.1| DNA mismatch repair protein Mlh1 [Aspergillus kawachii IFO 4308]
Length = 734
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 7/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RY+VH V F+ +K ++ + T ++ + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYSVHCSGVAFSCRKHGDSGVSVSTPAAANTIDRI 246
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + FS
Sbjct: 247 RQIHGSAVANELVEFS 262
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK GGLKLLQI D
Sbjct: 27 RPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
Query: 193 ASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVY 246
A N L SVE DD + +G+ TN N+ K+ T LLFIN+ IKR +EQ Y
Sbjct: 253 AVANELVEFSVE--DDKLGFRSSGFATNANYHVKRTTILLFINHRSVESTAIKRAVEQTY 310
Query: 247 SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
S +LPKG PF Y+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + + L ++S
Sbjct: 311 SSFLPKGGHPFAYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSS 370
Query: 307 RVFYTQSTSIQVTVKQ 322
R F TQ+ VT +
Sbjct: 371 RTFLTQTLLPGVTTME 386
>gi|83772756|dbj|BAE62884.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869351|gb|EIT78550.1| DNA mismatch repair protein - MLH1 family [Aspergillus oryzae
3.042]
Length = 734
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 136/197 (69%), Gaps = 7/197 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 67 STSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y + KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSNGKLVAPKPGQPAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K ++ I T V ++ + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDSGVSISTPVTANTIDRI 246
Query: 486 GNIYGNNISRRVRRFSS 502
I+G+ ++ + F S
Sbjct: 247 RQIHGSAVANELVEFKS 263
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI D
Sbjct: 27 KPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D + +G++TN N+ K+ LLFIN+ +KR IEQ YS +LPK
Sbjct: 257 ELVEFKSEDRKLGFRSSGYVTNANYHVKRTVILLFINHRSVESTAVKRAIEQTYSSFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF Y+ L ++P VDVNVHPTK EV+FL+ED IIE + ++ L ++SR F TQ
Sbjct: 317 GGHPFAYIDLEIEPHRVDVNVHPTKREVNFLNEDEIIECICQEIKSNLTQVDSSRTFLTQ 376
Query: 313 S 313
+
Sbjct: 377 T 377
>gi|430811132|emb|CCJ31386.1| unnamed protein product [Pneumocystis jirovecii]
Length = 640
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 142/203 (69%), Gaps = 7/203 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI + V+ GGLKLLQ+ DNG GI KED+ I+CERFTTSKL FEDL+SIST+GFRGEA
Sbjct: 51 ATSIDILVEGGGLKLLQVSDNGHGIMKEDLSILCERFTTSKLRTFEDLSSISTYGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH++++T+ITKT S CA++A+Y++ KL P KP AG QGTQI+ +DLF
Sbjct: 111 LASISHISYVTVITKTSDSSCAWKANYLNGKLVSPKEGESSDPKPAAGRQGTQIVIKDLF 170
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YNIP+R K+ + ++EY +I DV+ RYAVH +GF+ K E + I T+ S+ E I
Sbjct: 171 YNIPSRLKSFRSSNDEYIRILDVIYRYAVHCEKIGFSCKNYGEIIPSITTSSKSTVIENI 230
Query: 486 GNIYGNNISRRVRRFSSASQSAL 508
+YG IS + FS SQ +
Sbjct: 231 KQLYGAAISSELLPFSLNSQDYM 253
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 217/410 (52%), Gaps = 87/410 (21%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I LD +VV++IAAGEVIQRP+NALKEL+ENS+DA +TSI + V+ GGLKLLQ+ DN
Sbjct: 12 PKRILSLDISVVSKIAAGEVIQRPSNALKELIENSVDAGATSIDILVEGGGLKLLQVSDN 71
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KED+ I+CERFTTSKL FEDL+SIST+GFRGEALASISH++++T+ITKT S
Sbjct: 72 GHGIMKEDLSILCERFTTSKLRTFEDLSSISTYGFRGEALASISHISYVTVITKTSDSS- 130
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQW---------------------- 161
C + A+ + L+ + D + ++ Q
Sbjct: 131 ----CAWKANYLNGKLVSPKEGESSDPKPAAGRQGTQIVIKDLFYNIPSRLKSFRSSNDE 186
Query: 162 --------YRTVEHT------------LVPLMKSQYQPSEKIVERACLLEIASLNNLELL 201
YR H ++P + + + + ++E L A++++ ELL
Sbjct: 187 YIRILDVIYRYAVHCEKIGFSCKNYGEIIPSITTSSKST--VIENIKQLYGAAISS-ELL 243
Query: 202 --SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKG 253
S+ D FQ K G+ T+V++S KK TFLLFIN +KR +E +Y I
Sbjct: 244 PFSLNSQDYMFQAK--GFFTSVSYSAKKTTFLLFINRRSVDCKALKRGLESIYKI----- 296
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ VDVN+HPTK EV F +ED II + + L SR+ +++
Sbjct: 297 -----------ESSRVDVNIHPTKREVRFFYEDEIINLICKKVHSEL-----SRINSSKT 340
Query: 314 TSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSI 363
S+Q TVK L + + G +K + +R+ +F+ + SI
Sbjct: 341 ISLQ-TVKAKSCPLNYVNETLEGGKK-----IYDRYYVRTDAKFQTITSI 384
>gi|313235516|emb|CBY10971.1| unnamed protein product [Oikopleura dioica]
Length = 670
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 192/337 (56%), Gaps = 40/337 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + V+N+IAAGEV+QRPANA+KEL+ENS+DA + SI++ K+GGL++ I+D+G G
Sbjct: 3 IRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + RF TSKL ++ DL I +FGFRGEALASISHV HLTI +K + AY+
Sbjct: 63 IAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVAYK 122
Query: 127 WC--------------------TYLADLMALALMEMSQYLQRDK-EQIGD--KEEKQWYR 163
+ DL M Y + +I D + Y
Sbjct: 123 LSFDGGKANGEAIPSAGKNGTLIQVKDLFHNMNMRQKSYNPNETFAKIADVIRAYSIHYE 182
Query: 164 TVEHTLVPLMKSQYQ------PSEK-IVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
+ +L + KSQ Q P K I+E+ E++S +L+ + TD+ +
Sbjct: 183 KLNFSLFRIDKSQTQVRSWNLPDRKTIIEKTFSKEVSS----NILTSKLTDEEIGVDGEI 238
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ T+ + KK L+FINN IK++IE +Y +LP+GS P+VY+++ M +N+D
Sbjct: 239 FFTSSVYCGKKFILLIFINNRLIESKQIKQIIESIYEDFLPRGSRPWVYINITMPGRNID 298
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
VNVHPTK EV FLH++ I + ++ ++ L+ + T R
Sbjct: 299 VNVHPTKMEVQFLHDERIYDLIKKKMDMFLIPTKTDR 335
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI++ K+GGL++ I+D+G GI ED+ + RF TSKL ++ DL I +FGFRGEA
Sbjct: 39 AKSIKIKTKKGGLEMFSIEDDGCGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHV HLTI +K + AY+ S+ K P AG GT I +DLF+N+ R+
Sbjct: 99 LASISHVGHLTITSKPASQQVAYKLSFDGGKANGEAIPSAGKNGTLIQVKDLFHNMNMRQ 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL----KKQNE----NLADIRTNVNSSHS-E 483
K+ P+E + KIADV+ Y++H + F+L K Q + NL D +T + + S E
Sbjct: 159 KSY-NPNETFAKIADVIRAYSIHYEKLNFSLFRIDKSQTQVRSWNLPDRKTIIEKTFSKE 217
Query: 484 VIGNI 488
V NI
Sbjct: 218 VSSNI 222
>gi|134084347|emb|CAK48687.1| unnamed protein product [Aspergillus niger]
Length = 767
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 58 STSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 117
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 118 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 177
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RY+VH V F+ +K ++ + T ++ + I
Sbjct: 178 YNVPTRRRAFRSASEEYAKILDVVGRYSVHCSGVAFSCRKHGDSGVSVSTPAAANTIDRI 237
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + +F+
Sbjct: 238 RQIHGSAVANELVKFN 253
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK GGLKLLQI D
Sbjct: 18 RPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITD 77
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 78 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 137
Query: 123 CAYR 126
CA+R
Sbjct: 138 CAWR 141
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ + +G+ TN N+ K+ T LLFIN+ IKR +EQ YS +LPK
Sbjct: 248 ELVKFNVEDEKLGFRSSGFATNANYHVKRTTILLFINHRSVESTAIKRAVEQTYSSFLPK 307
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 308 GGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQ 367
Query: 313 STSIQVTVKQ 322
+ VT +
Sbjct: 368 TLLPGVTTME 377
>gi|430813142|emb|CCJ29486.1| unnamed protein product [Pneumocystis jirovecii]
Length = 291
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 141/200 (70%), Gaps = 7/200 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI + V+ GGLKLLQ+ DNG GI KED+ I+CERFTTSKL FEDL+SIST+GFRGEA
Sbjct: 51 ATSIDILVEGGGLKLLQVSDNGHGIMKEDLSILCERFTTSKLRTFEDLSSISTYGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH++++T+ITKT S CA++A+Y++ KL P KP AG QGTQI+ +DLF
Sbjct: 111 LASISHISYVTVITKTSDSSCAWKANYLNGKLVSPKEGESSDPKPAAGRQGTQIVIKDLF 170
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YNIP+R K+ + ++EY +I DV+ RYAVH +GF+ K E + I T+ S+ E I
Sbjct: 171 YNIPSRLKSFRSSNDEYIRILDVIYRYAVHCEKIGFSCKNYGEIIPSITTSSKSTVIENI 230
Query: 486 GNIYGNNISRRVRRFSSASQ 505
+YG IS + FS SQ
Sbjct: 231 KQLYGAAISSELLPFSLNSQ 250
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 165/272 (60%), Gaps = 46/272 (16%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I LD +VV++IAAGEVIQRP+NALKEL+ENS+DA +TSI + V+ GGLKLLQ+ DN
Sbjct: 12 PKRILSLDISVVSKIAAGEVIQRPSNALKELIENSVDAGATSIDILVEGGGLKLLQVSDN 71
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI KED+ I+CERFTTSKL FEDL+SIST+GFRGEALASISH++++T+ITKT S C
Sbjct: 72 GHGIMKEDLSILCERFTTSKLRTFEDLSSISTYGFRGEALASISHISYVTVITKTSDSSC 131
Query: 124 AYRWCTYL------------ADLMALALMEMSQYLQRD---------KEQIGDKEE---- 158
A++ YL +D A + +Q + +D K +E
Sbjct: 132 AWK-ANYLNGKLVSPKEGESSDPKPAAGRQGTQIVIKDLFYNIPSRLKSFRSSNDEYIRI 190
Query: 159 -KQWYRTVEHT------------LVPLMKSQYQPSEKIVERACLLEIASLNNLELL--SV 203
YR H ++P + + + + ++E L A++++ ELL S+
Sbjct: 191 LDVIYRYAVHCEKIGFSCKNYGEIIPSITTSSKST--VIENIKQLYGAAISS-ELLPFSL 247
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN 235
D FQ K G+ T+V++S KK TFLLFIN
Sbjct: 248 NSQDYMFQAK--GFFTSVSYSAKKTTFLLFIN 277
>gi|115387545|ref|XP_001211278.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195362|gb|EAU37062.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 745
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 9/196 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 67 STSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKHFEDLSSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT S CA+RA Y D KL P KP AG GTQI EDL
Sbjct: 127 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLV-PAKPGQSAAPKATAGRGGTQITVEDL 185
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+PTRR+A + SEEY KI DVV RYAVH V F+ +K ++ I T ++ ++
Sbjct: 186 FYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDSGVSISTPAAANTTDR 245
Query: 485 IGNIYGNNISRRVRRF 500
I I+G+ ++ + F
Sbjct: 246 IRQIHGSAVANELVEF 261
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 103/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI D
Sbjct: 27 KPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKHFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D+ + +G +TN N+ KK LLFIN+ +KR IEQ Y+ +LPK
Sbjct: 257 ELVEFKIEDEKLGFRSSGLVTNANYHVKKTVILLFINHRSVESTAVKRAIEQTYASFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQ 376
Query: 313 STSIQVTVKQ 322
+ VT +
Sbjct: 377 TLLPGVTTME 386
>gi|403418036|emb|CCM04736.1| predicted protein [Fibroporia radiculosa]
Length = 745
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 134/190 (70%), Gaps = 7/190 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+VT+K GG+KLL IQDNG GIRK D+ I+ ERFTTSKL+ F DL+ ++T+GFRGEA
Sbjct: 60 STSIRVTIKDGGMKLLSIQDNGCGIRKTDLPILAERFTTSKLSTFADLSRLTTYGFRGEA 119
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASIS+VA L++++KTK CA++A Y D L P KPCAGN GT I E+LF
Sbjct: 120 LASISYVAQLSVVSKTKAETCAWKAVYSDGVLTAPKAGATSEPKPCAGNDGTTITVENLF 179
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN PTR AL+ SEEY +I DVV++YA+HNPHV FT +K D+ T S+ ++ I
Sbjct: 180 YNTPTRLSALRGSSEEYARILDVVTKYAIHNPHVSFTCRKAGSLSPDVSTPSASTTAQAI 239
Query: 486 GNIYGNNISR 495
+YG I++
Sbjct: 240 RLLYGQTIAK 249
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 107/124 (86%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I++L++TV+NRIAAGE+I RPA+ALKEL+ENSLDA STSI+VT+K GG+KLL IQD
Sbjct: 20 EPLPIRRLEQTVINRIAAGEIIHRPASALKELIENSLDAGSTSIRVTIKDGGMKLLSIQD 79
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GIRK D+ I+ ERFTTSKL+ F DL+ ++T+GFRGEALASIS+VA L++++KTK
Sbjct: 80 NGCGIRKTDLPILAERFTTSKLSTFADLSRLTTYGFRGEALASISYVAQLSVVSKTKAET 139
Query: 123 CAYR 126
CA++
Sbjct: 140 CAWK 143
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 218 ITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
T+ ++ KK LLFIN+ I++ +E +Y+ LPKG+ PF+YLSL +DP++VDV
Sbjct: 284 FTSPHYQGKKTVMLLFINHRLVDSTRIQKALESIYAGILPKGAAPFIYLSLHIDPRSVDV 343
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTK EVHFL+E+ IIE++ ++K L+ N SR F Q+
Sbjct: 344 NVHPTKREVHFLNEEAIIEQISDAMQKKLVEQNQSRSFEYQT 385
>gi|448529420|ref|XP_003869841.1| Mlh1 mismatch repair protein [Candida orthopsilosis Co 90-125]
gi|380354195|emb|CCG23708.1| Mlh1 mismatch repair protein [Candida orthopsilosis]
Length = 733
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 139/200 (69%), Gaps = 14/200 (7%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T+I++ VK+GGLKLLQI DNG GI K+D+ ++CERF TSKLT+FEDL SI+T+GFRG
Sbjct: 43 AKATNIEIVVKEGGLKLLQITDNGEGINKDDLPLLCERFATSKLTKFEDLESIATYGFRG 102
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-------------KDPIKPCAGNQGT 417
EAL+SISH++ L++ TKT+ S AY+A Y+D KL DP KP AG GT
Sbjct: 103 EALSSISHISRLSVTTKTRESKLAYKAFYLDGKLCTSSFKSSLDGKVADP-KPIAGRDGT 161
Query: 418 QIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
QI EDLFYN+P+R + LK S+E+ KI D+V RYA+H PHVGF+ KK + L + T
Sbjct: 162 QITVEDLFYNLPSRSRGLKSKSDEFAKILDIVGRYAIHTPHVGFSCKKYGDPLHQLITRA 221
Query: 478 NSSHSEVIGNIYGNNISRRV 497
N S E I +YG+ ++ +
Sbjct: 222 NMSLKERIRTVYGSAVTNEL 241
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 108/121 (89%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIKKLDE+V+++IAAGE+I +PANALKE+LENS+DAK+T+I++ VK+GGLKLLQI DNG
Sbjct: 8 KIKKLDESVISKIAAGEIIIQPANALKEMLENSIDAKATNIEIVVKEGGLKLLQITDNGE 67
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ ++CERF TSKLT+FEDL SI+T+GFRGEAL+SISH++ L++ TKT+ S AY
Sbjct: 68 GINKDDLPLLCERFATSKLTKFEDLESIATYGFRGEALSSISHISRLSVTTKTRESKLAY 127
Query: 126 R 126
+
Sbjct: 128 K 128
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
LK TG ITN N++ KK + ++FIN +P+KR I V+ +LPKGS+PF YLSL +
Sbjct: 266 LKATGAITNANYNNKKKIQPIIFINHRLVSCDPLKRAINSVFQFFLPKGSYPFFYLSLEI 325
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+N+DVNVHPTK EV FL+E+ II+ + + TL +TSR F TQS
Sbjct: 326 KPENLDVNVHPTKREVRFLNEEEIIDIIVGKVHGTLANFDTSRKFQTQS 374
>gi|296414329|ref|XP_002836854.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632695|emb|CAZ81045.1| unnamed protein product [Tuber melanosporum]
Length = 693
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 132/195 (67%), Gaps = 7/195 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI + VK GGLKLLQI DNG GI + D+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 68 STSIDILVKDGGLKLLQISDNGHGIDENDLPILCERFTTSKLQSFEDLQSIGTYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLTI T+T SP RA+Y DSKL P KP N+GTQI EDLF
Sbjct: 128 LASISHIAHLTITTRTANSPIGLRATYSDSKLITPKPGQPANPKPVHRNKGTQITVEDLF 187
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+P+RR+A + PSEEY KI D+V RYAVH V F+ KK + + T ++ ++ I
Sbjct: 188 YNVPSRRRAFRSPSEEYAKILDLVGRYAVHCGGVAFSCKKYGDPDVGVSTTAGATTTDRI 247
Query: 486 GNIYGNNISRRVRRF 500
I+GN ++ + F
Sbjct: 248 RRIHGNAVANELLPF 262
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/127 (67%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LD+ VVN+IAAGE+I P +ALKEL+ENS+DA STSI + VK GGLKLLQI DN
Sbjct: 29 PRRIKPLDQVVVNKIAAGEIIVAPVHALKELIENSVDAGSTSIDILVKDGGLKLLQISDN 88
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI + D+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHLTI T+T SP
Sbjct: 89 GHGIDENDLPILCERFTTSKLQSFEDLQSIGTYGFRGEALASISHIAHLTITTRTANSPI 148
Query: 124 AYRWCTY 130
R TY
Sbjct: 149 GLR-ATY 154
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 6/117 (5%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL E +DD K G ++N N+ KK T LLFINN I++ IE Y+ +LPK
Sbjct: 258 ELLPFEVSDDYLGFKAKGMLSNANYHVKKTTLLLFINNRSVDSSSIRKGIESTYAPFLPK 317
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
G PF Y+SL ++P VDVNVHPTK EV+FLHE+ I++++ L++ L +TSR +
Sbjct: 318 GGHPFAYMSLDIEPHRVDVNVHPTKREVNFLHEEEIVQKLCESLQEKLAAVDTSRSY 374
>gi|367016701|ref|XP_003682849.1| hypothetical protein TDEL_0G02710 [Torulaspora delbrueckii]
gi|359750512|emb|CCE93638.1| hypothetical protein TDEL_0G02710 [Torulaspora delbrueckii]
Length = 730
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 134/188 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ + V+ GG+ LLQ+ DNG+GI KEDM ++CERFTTSKLT+FEDL SI+T+GFRGEA
Sbjct: 41 ATALDILVRDGGMNLLQVTDNGSGINKEDMPLLCERFTTSKLTKFEDLESIATYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A +T+ TKT CA+R SY + ++ KP AG GT I+ EDLFYN+P+R
Sbjct: 101 LASISHIARVTVTTKTVEDKCAWRVSYAEGRIIGEPKPVAGKDGTVILVEDLFYNMPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+AL+ PSEEY KI DVV RY+VH HV F+ KK ++ +SS E I ++GN
Sbjct: 161 QALRSPSEEYAKILDVVGRYSVHCDHVAFSCKKFGDSQFSSTVRADSSTEERIRVVFGNA 220
Query: 493 ISRRVRRF 500
++R + F
Sbjct: 221 VARSLLHF 228
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 101/120 (84%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LDE+VVN+IAAGE+I P NALKE++ENS+DA +T++ + V+ GG+ LLQ+ DNG+G
Sbjct: 5 IRPLDESVVNKIAAGEIIISPMNALKEMMENSIDAGATALDILVRDGGMNLLQVTDNGSG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KEDM ++CERFTTSKLT+FEDL SI+T+GFRGEALASISH+A +T+ TKT CA+R
Sbjct: 65 INKEDMPLLCERFTTSKLTKFEDLESIATYGFRGEALASISHIARVTVTTKTVEDKCAWR 124
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Query: 213 KVTGWITNVNFSTKKMTF-LLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
+VTG ++N++F+ KK T + FINN P+ R + Q+Y+ +LPKGS PF+YLS+ ++
Sbjct: 240 RVTGKVSNLDFTFKKSTTPVFFINNRLVTCNPLARALRQIYANHLPKGSKPFIYLSIQIN 299
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
P+ +DVNVHPTK EV FLH+D IIE++ L L ++SR F
Sbjct: 300 PQVLDVNVHPTKREVRFLHQDEIIEKIAHELNDVLSNIDSSRSF 343
>gi|452825428|gb|EME32425.1| DNA mismatch repair protein MLH1 [Galdieria sulphuraria]
Length = 767
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 206/364 (56%), Gaps = 52/364 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LD+ V +RIAAGEVI RPA+ +KELLENS+DA++T I+V++ GGLK ++ +D+G G
Sbjct: 23 IKRLDKDVSDRIAAGEVILRPASVVKELLENSIDAQATRIEVSLLDGGLKTIRFKDDGEG 82
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +D++++CERF TSK+T++EDL SI TFGFRGEALASIS V+HLT+ T + S A++
Sbjct: 83 IHPDDLNLLCERFATSKMTKYEDLLSIGTFGFRGEALASISFVSHLTVTTMKENSDFAHQ 142
Query: 127 WCTYLADLMALALMEMSQYLQ--------------------RDKEQIGDKEEKQW----- 161
L+ ++ S + R + KEE ++
Sbjct: 143 AYFENGRLVPSDILGASNPKKCSGVKGTTFIVEDLFYNCPLRRRSLSNSKEEYRFIIDLL 202
Query: 162 ------YRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDD 208
Y +V + L ++Y V+ E+AS+ N+ ELL V
Sbjct: 203 MKYSIRYPSVSFSCRRLENAKYDFFTPSVDS----ELASIGNVYGKELTEELLEVGPLCT 258
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSL 262
+F G+I+N NFS ++ +L F+N +K+ I +Y+ LPKG PF+Y+ +
Sbjct: 259 SFSFH--GYISNANFSLRRPQYLFFVNGRLIEWQSLKKAISSLYNSLLPKGGHPFIYIDV 316
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQ 322
+DP +DVNVHP K ++ L E+ IIE++ +E L +++SR FYT S++ T +
Sbjct: 317 TIDPHRLDVNVHPAKRQICILDEEYIIEKLLHSIETKLTMTSSSRNFYT--VSLRDTSYR 374
Query: 323 GGLK 326
G ++
Sbjct: 375 GSIE 378
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 123/194 (63%), Gaps = 9/194 (4%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
Q+T I+V++ GGLK ++ +D+G GI +D++++CERF TSK+T++EDL SI TFGFRGE
Sbjct: 58 QATRIEVSLLDGGLKTIRFKDDGEGIHPDDLNLLCERFATSKMTKYEDLLSIGTFGFRGE 117
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAED 423
ALASIS V+HLT+ T + S A++A + + +L +P K C+G +GT I ED
Sbjct: 118 ALASISFVSHLTVTTMKENSDFAHQAYFENGRLVPSDILGASNP-KKCSGVKGTTFIVED 176
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN P RR++L EEY I D++ +Y++ P V F+ ++ D T S
Sbjct: 177 LFYNCPLRRRSLSNSKEEYRFIIDLLMKYSIRYPSVSFSCRRLENAKYDFFTPSVDSELA 236
Query: 484 VIGNIYGNNISRRV 497
IGN+YG ++ +
Sbjct: 237 SIGNVYGKELTEEL 250
>gi|350630592|gb|EHA18964.1| hypothetical protein ASPNIDRAFT_42780 [Aspergillus niger ATCC 1015]
Length = 721
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 135/196 (68%), Gaps = 7/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 58 STSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 117
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 118 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 177
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RY+VH V F+ +K ++ + T ++ + I
Sbjct: 178 YNVPTRRRAFRSASEEYAKILDVVGRYSVHCSGVAFSCRKHGDSGVSVSTPAAANTIDRI 237
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + F+
Sbjct: 238 RQIHGSAVANELVEFN 253
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 104/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK GGLKLLQI D
Sbjct: 18 RPKRIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITD 77
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 78 NGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSS 137
Query: 123 CAYR 126
CA+R
Sbjct: 138 CAWR 141
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ + +G+ TN N+ K+ T LLFIN+ IKR +EQ YS +LPK
Sbjct: 248 ELVEFNVEDEKLGFRSSGFATNANYHVKRTTILLFINHRSVESTAIKRAVEQTYSSFLPK 307
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P+ VDVNVHPTK EV+FL+ED IIE + + + L ++SR F TQ
Sbjct: 308 GGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQ 367
Query: 313 STSIQVTVKQ 322
+ VT +
Sbjct: 368 TLLPGVTTTE 377
>gi|156845600|ref|XP_001645690.1| hypothetical protein Kpol_1043p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156116357|gb|EDO17832.1| hypothetical protein Kpol_1043p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 743
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 134/181 (74%)
Query: 314 TSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL 373
+SI + VK GG+K+LQI DNG+GI K+D+ I+CERFTTSKL++FEDL +I T+GFRGEAL
Sbjct: 42 SSIDILVKDGGIKVLQITDNGSGIEKDDLPILCERFTTSKLSKFEDLGNIETYGFRGEAL 101
Query: 374 ASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRK 433
ASISH++ +T+ TKTK CA++ SY + K+ KP AG GT I+ EDLFYNIP+R +
Sbjct: 102 ASISHISRVTVTTKTKNDQCAWKVSYSEGKMLGQPKPVAGRDGTVILVEDLFYNIPSRLR 161
Query: 434 ALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
+L+ PS+EY+KI DVV RYAVH+ +GF+ KK ++ + N + E I ++GNN+
Sbjct: 162 SLRSPSDEYSKILDVVGRYAVHSKDIGFSCKKMGDSNFTLTVRANLTIQERIRTVFGNNV 221
Query: 494 S 494
S
Sbjct: 222 S 222
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 101/121 (83%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LD +VVN+IAAGE+I P NALKE++ENS+DA +SI + VK GG+K+LQI DNG+
Sbjct: 4 KIKALDPSVVNKIAAGEIIISPVNALKEMMENSIDAGCSSIDILVKDGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ I+CERFTTSKL++FEDL +I T+GFRGEALASISH++ +T+ TKTK CA+
Sbjct: 64 GIEKDDLPILCERFTTSKLSKFEDLGNIETYGFRGEALASISHISRVTVTTKTKNDQCAW 123
Query: 126 R 126
+
Sbjct: 124 K 124
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 11/119 (9%)
Query: 213 KVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
++ G +T++NF KK + + FINN P++R + QV+ YL KG F+YL++ +D
Sbjct: 240 RIDGQVTDLNFQMKKSIQPIFFINNRLVTCDPLRRSLNQVFGTYLSKGFKAFIYLNILID 299
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS----TSIQVTV 320
P++VDVNVHPTK EV FL++D IIE++ L L NTSR F T + ++VTV
Sbjct: 300 PQSVDVNVHPTKREVRFLNQDEIIEKINFHLNDELSKLNTSRTFKTSTLLTGQPVEVTV 358
>gi|302799816|ref|XP_002981666.1| hypothetical protein SELMODRAFT_421150 [Selaginella moellendorffii]
gi|300150498|gb|EFJ17148.1| hypothetical protein SELMODRAFT_421150 [Selaginella moellendorffii]
Length = 735
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 141/210 (67%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R S L++ L S +T + V VK GGLKL+QI DNG GIR ED+ I+CE
Sbjct: 25 VIQRPASALKELLENS-----LDAGATVVSVIVKDGGLKLIQITDNGHGIRYEDLPILCE 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSK+T FEDL +ST GFRGEALAS++ VAHLT+ T T+ YRASY D ++
Sbjct: 80 RHTTSKITAFEDLQRVSTLGFRGEALASMTFVAHLTVTTMTEGQTHGYRASYKDGAMEGD 139
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PCA +GTQI+ E+LFYN+ RRK+ K PS+EY ++ DV+S+Y++ NP VGF+ KK
Sbjct: 140 PRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDVISKYSIQNPKVGFSCKKFG 199
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ AD++T N+S E I +YG SR +
Sbjct: 200 DARADVQTPGNTSALEAIRAVYGPGTSREL 229
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 102/126 (80%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M PP+I+KL+E+VVNRIAAGEVIQRPA+ALKELLENSLDA +T + V VK GGLKL+QI
Sbjct: 3 MALPPRIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLIQI 62
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GIR ED+ I+CER TTSK+T FEDL +ST GFRGEALAS++ VAHLT+ T T+
Sbjct: 63 TDNGHGIRYEDLPILCERHTTSKITAFEDLQRVSTLGFRGEALASMTFVAHLTVTTMTEG 122
Query: 121 SPCAYR 126
YR
Sbjct: 123 QTHGYR 128
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
+ D+F++ G+I++ N+S K+ T +LFIN+ P+KR IE VY+ LPK S P++Y
Sbjct: 239 SSDSFEM--NGYISSANYSAKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIY 296
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
+S+ + ++VDVNVHPTK EV FL+++++IE +Q+ +E+ LL SN SR FY Q++
Sbjct: 297 MSIRLPSEHVDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAF 356
Query: 320 VKQG 323
+ QG
Sbjct: 357 LPQG 360
>gi|168021022|ref|XP_001763041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685853|gb|EDQ72246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 721
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 146/219 (66%), Gaps = 5/219 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R S L++ L S +TSI +T+K GGLKL+QI DNG GIR ED+ ++CE
Sbjct: 29 VIQRPASALKELLENS-----LDAGATSIGITIKDGGLKLIQIVDNGHGIRYEDLPLLCE 83
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL FEDL IST GFRGEALASI+ VAHL++IT T+ Y+A+Y D +++
Sbjct: 84 RHATSKLQVFEDLEVISTLGFRGEALASITFVAHLSVITMTEGQAHGYKATYKDGQMQAE 143
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PCA +GTQI E+LFYN+ RRKA K P+EEY +I DVVSRYA+H + F+ KK
Sbjct: 144 ARPCAAVKGTQITVENLFYNVAARRKAFKNPNEEYGRILDVVSRYAIHKIGISFSCKKHG 203
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
++ AD+ T +SS ++ I +YG ++R + S++ S
Sbjct: 204 DSRADVHTVGSSSRTDTIRAVYGPGVARELIAISASDDS 242
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 99/123 (80%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P IK+L+E VVNRIAAGEVIQRPA+ALKELLENSLDA +TSI +T+K GGLKL+QI DN
Sbjct: 10 PAPIKRLEEAVVNRIAAGEVIQRPASALKELLENSLDAGATSIGITIKDGGLKLIQIVDN 69
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GIR ED+ ++CER TSKL FEDL IST GFRGEALASI+ VAHL++IT T+
Sbjct: 70 GHGIRYEDLPLLCERHATSKLQVFEDLEVISTLGFRGEALASITFVAHLSVITMTEGQAH 129
Query: 124 AYR 126
Y+
Sbjct: 130 GYK 132
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 85/123 (69%), Gaps = 9/123 (7%)
Query: 199 ELLSVEGTDDAFQ---LKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIY 249
EL+++ +DD+ Q ++ G I++ N+S+K+ + +LFIN+ +++ IE VY+
Sbjct: 232 ELIAISASDDSPQGSTFQMDGLISSANYSSKRSSMVLFINDRLVECTALRKAIELVYATI 291
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPK S PF+Y+S+ + P++VDVNVHPTK EV FL+++++++ +Q +E LL SN SR F
Sbjct: 292 LPKASKPFIYMSIHLPPEHVDVNVHPTKREVSFLNQESLVDTIQQAVEAKLLESNNSRTF 351
Query: 310 YTQ 312
TQ
Sbjct: 352 STQ 354
>gi|400602187|gb|EJP69812.1| putative MLH1 protein [Beauveria bassiana ARSEF 2860]
Length = 707
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 140/201 (69%), Gaps = 9/201 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+++V VK GGLKLLQI DNG+GI+K+D+ I+CER TTSK+ FEDL +IST+GFRGEA
Sbjct: 63 STALEVLVKDGGLKLLQITDNGSGIQKDDLAILCERHTTSKIAAFEDLAAISTYGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAEDL 424
LASISH+AHLT+ TKTK S A+RA Y+D KL P KP AG GTQI EDL
Sbjct: 123 LASISHIAHLTVTTKTKDSALAWRAHYLDGKLV-PSKPGQPAEPKGVAGRPGTQIAVEDL 181
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
F++IPTRRKA + ++E+NKI D+V RYA+H+ V FT KK E+ A + +S +
Sbjct: 182 FFSIPTRRKAFRSYADEFNKILDMVGRYAIHSTGVAFTCKKAGESSASLSIPAAASAIDR 241
Query: 485 IGNIYGNNISRRVRRFSSASQ 505
+ IYG ++ + S++ +
Sbjct: 242 VRQIYGGGVANELVEVSASDE 262
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 103/123 (83%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKELLEN++DA ST+++V VK GGLKLLQI DN
Sbjct: 24 PRRIRALDIDVVNKIAAGEIIVAPVHALKELLENAIDAGSTALEVLVKDGGLKLLQITDN 83
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GI+K+D+ I+CER TTSK+ FEDL +IST+GFRGEALASISH+AHLT+ TKTK S
Sbjct: 84 GSGIQKDDLAILCERHTTSKIAAFEDLAAISTYGFRGEALASISHIAHLTVTTKTKDSAL 143
Query: 124 AYR 126
A+R
Sbjct: 144 AWR 146
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPK 252
EL+ V +D+ + K + +TN N+ KK +LFIN+ IK IEQVYS +LPK
Sbjct: 253 ELVEVSASDERWGYKASALVTNANYHIKKTALVLFINHRAVESTNIKMAIEQVYSAFLPK 312
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVYLSL +DP VDVNVHPTK EVHFL+ED I+ + + + + L +TSR F TQ
Sbjct: 313 GGHPFVYLSLDIDPARVDVNVHPTKKEVHFLNEDEILHDICNKITEALTAVDTSRTFKTQ 372
Query: 313 S 313
+
Sbjct: 373 T 373
>gi|354547578|emb|CCE44313.1| hypothetical protein CPAR2_401150 [Candida parapsilosis]
Length = 750
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 141/208 (67%), Gaps = 13/208 (6%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T+I++ VK+GGLKLLQI DNG GI K+D+ ++CERF TSKLT+FEDL SI+T+GFRG
Sbjct: 45 AKATNIEIVVKEGGLKLLQITDNGEGINKDDLPLLCERFATSKLTKFEDLESIATYGFRG 104
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL------------KDPIKPCAGNQGTQ 418
EAL+SISH++ L++ TKT+ S AY+A Y+D KL DP KP AG GTQ
Sbjct: 105 EALSSISHISRLSVTTKTRDSKLAYKAFYLDGKLCTSSFKSSSGKSVDP-KPIAGRDGTQ 163
Query: 419 IIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN 478
I EDLFYN+P+R K L+ S+E+ +I D+V RYA+H HVGF+ KK + L + T N
Sbjct: 164 ITVEDLFYNLPSRFKGLRSKSDEFARILDIVGRYAIHTQHVGFSCKKYGDPLHQLNTRAN 223
Query: 479 SSHSEVIGNIYGNNISRRVRRFSSASQS 506
+ E I +YG+ ++ + + S S
Sbjct: 224 MALKERIRTVYGSAVANELMDITVGSSS 251
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 109/124 (87%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q KIKKLDE+V+N+IAAGE+I +PANALKE+LENS+DAK+T+I++ VK+GGLKLLQI D
Sbjct: 7 QSKKIKKLDESVINKIAAGEIIIQPANALKEMLENSIDAKATNIEIVVKEGGLKLLQITD 66
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI K+D+ ++CERF TSKLT+FEDL SI+T+GFRGEAL+SISH++ L++ TKT+ S
Sbjct: 67 NGEGINKDDLPLLCERFATSKLTKFEDLESIATYGFRGEALSSISHISRLSVTTKTRDSK 126
Query: 123 CAYR 126
AY+
Sbjct: 127 LAYK 130
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 75/109 (68%), Gaps = 7/109 (6%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
LKVTG ITN N++ KK + ++FIN +P+KR I V+ +LP+G++PF Y+SL +
Sbjct: 269 LKVTGAITNANYNNKKKIQPIIFINHRLVSCDPLKRAINSVFQYFLPRGNYPFFYISLEI 328
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+++DVN+HPTK EV FL+E+ II+ + + TL +TSR F TQS
Sbjct: 329 KPESLDVNIHPTKREVRFLNEEEIIDVIVGKVHGTLANFDTSRKFSTQS 377
>gi|254567882|ref|XP_002491051.1| Protein required for mismatch repair in mitosis and meiosis as well
as crossing over during meiosis [Komagataella pastoris
GS115]
gi|238030848|emb|CAY68771.1| Protein required for mismatch repair in mitosis and meiosis as well
as crossing over during meiosis [Komagataella pastoris
GS115]
gi|328352423|emb|CCA38822.1| DNA mismatch repair protein mutL [Komagataella pastoris CBS 7435]
Length = 633
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 135/183 (73%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSI + ++ GGLKLLQ+ DNG GI KED+ I+CERFTTSKL+ FEDLNSI T+GFRGE
Sbjct: 40 KSTSIDIIIQDGGLKLLQMTDNGVGIYKEDLPILCERFTTSKLSTFEDLNSIGTYGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH++ LT+ TKTK S CAYRA Y + ++ KP AG GTQI+ EDLFYN+P+R
Sbjct: 100 ALASISHISRLTVTTKTKDSACAYRAIYQEGRMVGEPKPVAGKDGTQILIEDLFYNVPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
++LK +E+ +KI DVV+RYA++ V F++KK + L + N+S + + ++G+
Sbjct: 160 LRSLKGGNEQLSKILDVVARYAINTDGVAFSVKKAGDTLNLLAVRANNSTKDKVRTVFGS 219
Query: 492 NIS 494
++
Sbjct: 220 AVA 222
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 102/121 (84%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD VVN+IAAGE+I P NALKELLEN++DAKSTSI + ++ GGLKLLQ+ DNG
Sbjct: 4 RIKALDIDVVNKIAAGEIIVAPENALKELLENAIDAKSTSIDIIIQDGGLKLLQMTDNGV 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+CERFTTSKL+ FEDLNSI T+GFRGEALASISH++ LT+ TKTK S CAY
Sbjct: 64 GIYKEDLPILCERFTTSKLSTFEDLNSIGTYGFRGEALASISHISRLTVTTKTKDSACAY 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 7/124 (5%)
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVYSIYLPKG 253
++VE +++ L G ITN ++ +KK ++ + FIN +P+KRMI Q+YS +LPKG
Sbjct: 228 IAVEKSEEIGLLSCEGQITNTSYYSKKSVSPIFFINGRLVSCDPLKRMITQLYSSFLPKG 287
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYL + + +N+DVNVHPTK EV FL ED I + + ++ L + SR F T
Sbjct: 288 HKPFVYLRIDIKRENLDVNVHPTKREVRFLFEDEIFQVIFQSIQAKLGSLDHSRKFVTTQ 347
Query: 314 TSIQ 317
+ ++
Sbjct: 348 SVLK 351
>gi|389740948|gb|EIM82138.1| DNA mismatch repair protein MutL [Stereum hirsutum FP-91666 SS1]
Length = 774
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 143/218 (65%), Gaps = 14/218 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L S +TSI+VTVK GGLKL+QIQDNG GI+K D+ I+ +
Sbjct: 31 IIHRPASALKELLENS-----LDAGTTSIRVTVKDGGLKLMQIQDNGCGIKKGDLPILAQ 85
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL F DL+ ++T+GFRGEALASISH+A+LT+ TKTK CA++A YID +L
Sbjct: 86 RFTTSKLATFSDLSHLTTYGFRGEALASISHIANLTVTTKTKKDSCAWKACYIDGELVSA 145
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
+P KPCAGN GT I+ E+LFYN PTR AL+ SEEY +I DVV++YAVHNP V
Sbjct: 146 KDGQSPEP-KPCAGNDGTTILVENLFYNTPTRLSALRSSSEEYARILDVVTKYAVHNPLV 204
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F KK D+ T S+ I +YG I + +
Sbjct: 205 AFVCKKAGSPSPDLTTPSASTTPTAIRLLYGQAIGKEL 242
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 111/133 (83%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++L++++VNRIAAGE+I RPA+ALKELLENSLDA +TSI+VTVK GGLKL+QIQDN
Sbjct: 12 PKPIRRLEQSLVNRIAAGEIIHRPASALKELLENSLDAGTTSIRVTVKDGGLKLMQIQDN 71
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI+K D+ I+ +RFTTSKL F DL+ ++T+GFRGEALASISH+A+LT+ TKTK C
Sbjct: 72 GCGIKKGDLPILAQRFTTSKLATFSDLSHLTTYGFRGEALASISHIANLTVTTKTKKDSC 131
Query: 124 AYRWCTYLADLMA 136
A++ C +L++
Sbjct: 132 AWKACYIDGELVS 144
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 59/80 (73%), Gaps = 6/80 (7%)
Query: 219 TNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
TNVN+ K+M F+LFIN+ IKR IE VY+ LPKGS PFVYLSL +DP VDVN
Sbjct: 287 TNVNYHAKQMIFILFINHRLVESSRIKRAIEAVYTSILPKGSSPFVYLSLLLDPTTVDVN 346
Query: 273 VHPTKHEVHFLHEDTIIERV 292
VHPTK EVHFL+E+TI E V
Sbjct: 347 VHPTKREVHFLNEETITEHV 366
>gi|363750940|ref|XP_003645687.1| hypothetical protein Ecym_3383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889321|gb|AET38870.1| Hypothetical protein Ecym_3383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 742
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 133/182 (73%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V +K+GG++LLQI DNG+GI K+D+ I+CERFTTSKLT FEDLN I T+GFRGEA
Sbjct: 53 ATHVDVLIKEGGVRLLQIVDNGSGIMKDDLPILCERFTTSKLTTFEDLNKIQTYGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A LT+ITKTK CA++ SY + K+ KP AG GT II EDLFYNIP+R
Sbjct: 113 LASISHIAKLTVITKTKDDTCAWKTSYKNGKITSDSKPTAGKDGTVIIVEDLFYNIPSRL 172
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
++L+ +EE+ KI DV+ RYA+H +VGF+ KK E+ + ++ E I +I+G+
Sbjct: 173 RSLRSSAEEFAKILDVLCRYAIHTDNVGFSCKKFGESQFSLNVRSEATRQERIRSIFGSQ 232
Query: 493 IS 494
+S
Sbjct: 233 VS 234
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 103/126 (81%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +IK LD +VVN+IAAGE+I P NALKE+LENS+DA +T + V +K+GG++LLQI
Sbjct: 11 MSAASRIKALDASVVNKIAAGEIIISPVNALKEMLENSIDAGATHVDVLIKEGGVRLLQI 70
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG+GI K+D+ I+CERFTTSKLT FEDLN I T+GFRGEALASISH+A LT+ITKTK
Sbjct: 71 VDNGSGIMKDDLPILCERFTTSKLTTFEDLNKIQTYGFRGEALASISHIAKLTVITKTKD 130
Query: 121 SPCAYR 126
CA++
Sbjct: 131 DTCAWK 136
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 80/121 (66%), Gaps = 7/121 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVYSI 248
NNL L ++ + ++ +G I+N+N++ KK + + FIN +P++R + QVYS
Sbjct: 235 NNLISLDMQDNREYGIVENSGKISNLNYNIKKGIPAIFFINHRLVSCDPLRRSLFQVYSN 294
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
+LPKGS PF+YLSL + P NVDVNVHPTK EV FLHED IIE + + +++ L +S+
Sbjct: 295 FLPKGSKPFIYLSLVIAPANVDVNVHPTKREVRFLHEDEIIECISNKVQEELQKIASSKS 354
Query: 309 F 309
F
Sbjct: 355 F 355
>gi|1465764|gb|AAC52672.1| similar to human MLH1 on chromosome 3p21, partial [Mus musculus]
Length = 151
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/120 (82%), Positives = 110/120 (91%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/108 (79%), Positives = 94/108 (87%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQI 419
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLI 150
>gi|395331378|gb|EJF63759.1| DNA binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 753
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 153/225 (68%), Gaps = 14/225 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + S +TSI++TVK GG+KLLQIQDNG+GIRK+D+ I+ E
Sbjct: 35 IIHRPASALKELIENS-----LDAGATSIKITVKDGGMKLLQIQDNGSGIRKDDLPILAE 89
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL+ F DL ++T+GFRGEALASIS+V++LT++TKTKT CA++A Y D L
Sbjct: 90 RFTTSKLSTFSDLKRLTTYGFRGEALASISYVSNLTVVTKTKTDTCAWKAVYADGALVPV 149
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
KDP KPCAGN GT I E+LFYN PTR AL+ SEEY +I DVV++YAVHNPHV
Sbjct: 150 KPGTSKDP-KPCAGNDGTTITVENLFYNTPTRLSALRGSSEEYTRILDVVTKYAVHNPHV 208
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSAS 504
FT KK D+ T +S+ + I +YG +++ + S +S
Sbjct: 209 SFTCKKVGTPSPDVSTPSSSTTVQAIQLLYGQTLAKELLNVSVSS 253
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 106/124 (85%), Gaps = 2/124 (1%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L E+V+NRIAAGE+I RPA+ALKEL+ENSLDA +TSI++TVK GG+KLLQIQDNG+GIRK
Sbjct: 22 LQESVINRIAAGEIIHRPASALKELIENSLDAGATSIKITVKDGGMKLLQIQDNGSGIRK 81
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWCT 129
+D+ I+ ERFTTSKL+ F DL ++T+GFRGEALASIS+V++LT++TKTKT CA W
Sbjct: 82 DDLPILAERFTTSKLSTFSDLKRLTTYGFRGEALASISYVSNLTVVTKTKTDTCA--WKA 139
Query: 130 YLAD 133
AD
Sbjct: 140 VYAD 143
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 218 ITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
TN N+ KKM LLFIN+ IK+ +E Y+ L KG+ PFVYLSL +DP++VDV
Sbjct: 288 FTNANYQAKKMVLLLFINHRLVESSRIKKALEAAYNGVLAKGASPFVYLSLHIDPRSVDV 347
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVHPTK EVHFL+ED IIER+ +++ L+G + SR F Q+
Sbjct: 348 NVHPTKKEVHFLNEDAIIERIADAMQEALIGQSHSRTFEYQT 389
>gi|324506169|gb|ADY42642.1| MutL protein 1 [Ascaris suum]
Length = 707
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 134/185 (72%), Gaps = 1/185 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I VT + GGL L+++QDNG GI KEDM IVC+RFTTSKL +FEDL ++STFGFRGEA
Sbjct: 40 ATEIIVTARNGGLDLIRVQDNGNGISKEDMRIVCDRFTTSKLRKFEDLENMSTFGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVAHL+II++T S CA+ A Y D K+ ++ AG GT + AE LFYN P+RR
Sbjct: 100 LASLSHVAHLSIISRTADSLCAHCAEYTDGKIVSDVRLSAGLVGTTVTAEQLFYNAPSRR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ALK P++E N+IADV+ RYA+HNP+V FT ++ +D RT + + VI ++ G
Sbjct: 160 RALKYPADEMNRIADVIVRYAIHNPNVSFTFRRCGSG-SDFRTIGDGNVYNVIASLLGEK 218
Query: 493 ISRRV 497
S+ +
Sbjct: 219 ASKNL 223
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 190/348 (54%), Gaps = 54/348 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +L + VVNRIAAGEVI RPANA+KEL+EN+LDA +T I VT + GGL L+++QDNG
Sbjct: 3 RIARLPDDVVNRIAAGEVIVRPANAIKELIENALDANATEIIVTARNGGLDLIRVQDNGN 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KEDM IVC+RFTTSKL +FEDL ++STFGFRGEALAS+SHVAHL+II++T S CA+
Sbjct: 63 GISKEDMRIVCDRFTTSKLRKFEDLENMSTFGFRGEALASLSHVAHLSIISRTADSLCAH 122
Query: 126 RWCTYLADLMALALMEMSQYL---QRDKEQI----GDKEEKQWYRTVEHTLVPLMKSQY- 177
C D ++ + +S L EQ+ + Y E + + +Y
Sbjct: 123 --CAEYTDGKIVSDVRLSAGLVGTTVTAEQLFYNAPSRRRALKYPADEMNRIADVIVRYA 180
Query: 178 --QPSEKIVERAC---------------------LLEIASLNNLELLSVEGTDDAFQLKV 214
P+ R C L E AS N L+ ++ D+ +
Sbjct: 181 IHNPNVSFTFRRCGSGSDFRTIGDGNVYNVIASLLGEKASKN---LVMLDHKDEKLFFSL 237
Query: 215 TGWIT-NVNFST---------KKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFV 258
+G+++ F T ++ F LFINN +K+ ++ V+ + FV
Sbjct: 238 SGYMSLPSAFCTARTIQARQDRQKIFFLFINNRSVECPALKQGLDVVFGAQNTLST--FV 295
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
LSL + +DVNVHPTK V FL +D II +Q +E+ + S+ S
Sbjct: 296 LLSLQIATNRIDVNVHPTKSTVFFLEQDAIISSIQDYIERVIHDSSGS 343
>gi|428184186|gb|EKX53042.1| Mlh1 mismatch repair mutL, partial [Guillardia theta CCMP2712]
Length = 748
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 132/201 (65%), Gaps = 20/201 (9%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I + VK GGLKLLQ+ DNG GI+KED+ I ERFTTSKL+++EDL SISTFGFRGEA
Sbjct: 36 STTISIQVKSGGLKLLQVTDNGHGIKKEDLKIAVERFTTSKLSKYEDLTSISTFGFRGEA 95
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVAHL I T T S CAY+A Y DSKL P+ CAG +GT I EDLFYN+P R
Sbjct: 96 LASISHVAHLNITTMTADSACAYKAHYKDSKLIPPVA-CAGVKGTTITVEDLFYNVPNRL 154
Query: 433 K----------------ALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN 476
K ALK P+EEYNKI +V + V L++ EN D+RT
Sbjct: 155 KAWKHSSDDLLVMTPSQALKNPTEEYNKIVEVTYTFV---STVALKLQQAGENSGDVRTR 211
Query: 477 VNSSHSEVIGNIYGNNISRRV 497
VNSS E I NIYG ++R +
Sbjct: 212 VNSSSKENIRNIYGAALAREL 232
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 100/119 (84%)
Query: 8 KKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGI 67
++LDE VNRIAAGEVI RPANALKELLENS+DA ST+I + VK GGLKLLQ+ DNG GI
Sbjct: 1 RRLDEETVNRIAAGEVIHRPANALKELLENSIDAGSTTISIQVKSGGLKLLQVTDNGHGI 60
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+KED+ I ERFTTSKL+++EDL SISTFGFRGEALASISHVAHL I T T S CAY+
Sbjct: 61 KKEDLKIAVERFTTSKLSKYEDLTSISTFGFRGEALASISHVAHLNITTMTADSACAYK 119
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 26/129 (20%)
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSI-------------- 248
FQL + ++N N+S K+ F+LFIN PIKR++E VYS
Sbjct: 253 GFQLNMQ--LSNPNYSVKRTIFILFINGRLVESGPIKRVLESVYSQACLHHMNFVCIVQL 310
Query: 249 ----YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
YLPKGS PFVY+SL P +DVNVHPTK EV FL E+ +++ +Q +EK LLG+N
Sbjct: 311 TEEQYLPKGSHPFVYMSLKFPPSQLDVNVHPTKQEVRFLDEEEVVQYIQDEIEKCLLGAN 370
Query: 305 TSRVFYTQS 313
SR F Q+
Sbjct: 371 ASRTFSIQT 379
>gi|149236814|ref|XP_001524284.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451819|gb|EDK46075.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 787
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 138/202 (68%), Gaps = 12/202 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T+I++ VK+GGLKLLQI DNG GI K D+ ++CERF TSKLT+FEDL I+T+GFRG
Sbjct: 49 AKATNIEIVVKEGGLKLLQITDNGQGIDKSDLHLLCERFATSKLTKFEDLELIATYGFRG 108
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL------------KDPIKPCAGNQGTQ 418
EAL+SISH++ L++++KT+ S AY+A YI+ K+ K KP AG GTQ
Sbjct: 109 EALSSISHISRLSVVSKTRDSNLAYKAYYINGKMCASNFKPATGNTKIEPKPIAGRDGTQ 168
Query: 419 IIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN 478
I EDLFYN+P+R K LK S+E+ KI D+V RYA+H HVGF+ KK + L + T N
Sbjct: 169 ITVEDLFYNLPSRFKGLKSKSDEFAKILDIVGRYAIHTGHVGFSCKKHGDPLHQLNTRAN 228
Query: 479 SSHSEVIGNIYGNNISRRVRRF 500
S E + +YG+NI+ + F
Sbjct: 229 LSIKERVRIVYGSNIANELLEF 250
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 103/117 (88%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
LDE+V+N+IAAGE+I +PANALKE+LENS+DAK+T+I++ VK+GGLKLLQI DNG GI K
Sbjct: 18 LDESVINKIAAGEIIIQPANALKEMLENSIDAKATNIEIVVKEGGLKLLQITDNGQGIDK 77
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
D+ ++CERF TSKLT+FEDL I+T+GFRGEAL+SISH++ L++++KT+ S AY+
Sbjct: 78 SDLHLLCERFATSKLTKFEDLELIATYGFRGEALSSISHISRLSVVSKTRDSNLAYK 134
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L+V G +TN NF+ KK + ++FIN +P++R + V+ +LPKGS PF Y+SL +
Sbjct: 273 LRVKGTLTNANFNNKKKIQPVIFINHRLVSCDPLRRAMNSVFQFFLPKGSHPFFYISLEI 332
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+N+DVNVHPTK EV FL+ED II+ + + + K L +TSR F TQ+
Sbjct: 333 KPENLDVNVHPTKREVRFLNEDEIIDLIVARVHKILSSVDTSRKFKTQT 381
>gi|393247276|gb|EJD54784.1| DNA binding protein [Auricularia delicata TFB-10046 SS5]
Length = 693
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 145/225 (64%), Gaps = 16/225 (7%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
+H L E II R S L++ L ST+IQ+ VK GGLKLLQ++DNG GIR+
Sbjct: 16 IHRLDEALIIHRPSSALKELL-----ENALDAGSTAIQLIVKDGGLKLLQLRDNGCGIRR 70
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
ED+ I+ ERFTTSKL+QF+DL S+ T+GFRGEALASIS VA L+++TKTK CA++A Y
Sbjct: 71 EDLPILAERFTTSKLSQFDDLRSLETYGFRGEALASISFVAQLSVVTKTKAESCAWKACY 130
Query: 400 IDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSR 451
+ L +P KPCAG GT I E+LFYN P R AL+ PS+EY ++ DV+++
Sbjct: 131 ANGALVPQKAGQTAEP-KPCAGTDGTIITVENLFYNTPVRLAALRNPSDEYGRLLDVMTK 189
Query: 452 YAVHNPHVGFTLKKQNENLADIRTNVNSS--HSEVIGNIYGNNIS 494
YAVH P V FT +K + D+ T + S + I +YG ++S
Sbjct: 190 YAVHKPSVSFTCRKSGASQPDLHTPGSPSTRARDNIHKLYGASVS 234
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 98/125 (78%), Gaps = 8/125 (6%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +LDE ++ I RP++ALKELLEN+LDA ST+IQ+ VK GGLKLLQ++DN
Sbjct: 13 PKPIHRLDEALI--------IHRPSSALKELLENALDAGSTAIQLIVKDGGLKLLQLRDN 64
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GIR+ED+ I+ ERFTTSKL+QF+DL S+ T+GFRGEALASIS VA L+++TKTK C
Sbjct: 65 GCGIRREDLPILAERFTTSKLSQFDDLRSLETYGFRGEALASISFVAQLSVVTKTKAESC 124
Query: 124 AYRWC 128
A++ C
Sbjct: 125 AWKAC 129
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 200 LLSVEGTDDAFQLKVTGW-----ITNVNFSTKKMTFLLFINN------PIKRMIEQVYSI 248
L+ +E ++ F W +N +++ K + +LFIN P +R IE VY+
Sbjct: 237 LIPLEANEEGFDDSSMAWHYDALCSNASYAGKSLKLILFINGRLVDSQPFRRAIESVYAP 296
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
L KGS PFVYLSL + P+ +DVNVHPTK EV FLHED ++ER L L SR
Sbjct: 297 ILAKGSHPFVYLSLGISPECLDVNVHPTKREVRFLHEDDVVERFTIDLAAKLAEQAQSRP 356
Query: 309 FYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDM 342
F + Q ++ L + + G+ + +E +
Sbjct: 357 FAFNTQKTQSRLQDDMLVDEEEDEQGSDMDEEPL 390
>gi|302678109|ref|XP_003028737.1| hypothetical protein SCHCODRAFT_59880 [Schizophyllum commune H4-8]
gi|300102426|gb|EFI93834.1| hypothetical protein SCHCODRAFT_59880 [Schizophyllum commune H4-8]
Length = 731
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 151/237 (63%), Gaps = 20/237 (8%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ L S +TSI+VTVK GG+KLLQIQDNG GIR D+ I+ E
Sbjct: 26 IIHRPASALKELLENS-----LDAGATSIRVTVKDGGMKLLQIQDNGCGIRITDLPILAE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL+ + DL+ I T+GFRGEALAS+SHV+HL++++KTKT CA++A Y D L
Sbjct: 81 RFTTSKLSSYSDLSRIQTYGFRGEALASMSHVSHLSVVSKTKTDNCAWKAHYADGNLIPA 140
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
+P KPCAGN GT I EDLFYN PTR AL+ SEEY +I DV+++YAVHNP V
Sbjct: 141 KPGQTAEP-KPCAGNNGTTITIEDLFYNTPTRLSALRSASEEYARILDVMTKYAVHNPSV 199
Query: 460 GFTLKKQNENLADIRTNVNSSHS----EVIGNIYGNNISRRV--RRFSSASQSALAR 510
F KK D+ T +++ +I YG++I + + +SS S+ A+
Sbjct: 200 SFVCKKAGSPSPDLSTPASAASPAGTQAIIRMTYGSSIVKELIHYYYSSGGDSSDAQ 256
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 109/130 (83%), Gaps = 2/130 (1%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++LDE+++NRIAAGE+I RPA+ALKELLENSLDA +TSI+VTVK GG+KLLQIQDN
Sbjct: 7 PQPIRRLDESLINRIAAGEIIHRPASALKELLENSLDAGATSIRVTVKDGGMKLLQIQDN 66
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GIR D+ I+ ERFTTSKL+ + DL+ I T+GFRGEALAS+SHV+HL++++KTKT C
Sbjct: 67 GCGIRITDLPILAERFTTSKLSSYSDLSRIQTYGFRGEALASMSHVSHLSVVSKTKTDNC 126
Query: 124 AYRWCTYLAD 133
A W + AD
Sbjct: 127 A--WKAHYAD 134
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 218 ITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
TN N+ KKM FLLFIN+ + KR IE VY+ LPKG+ PFVYLS+ + P VDV
Sbjct: 284 FTNPNYHAKKMVFLLFINHRLVESSRLKRAIEGVYATILPKGASPFVYLSIQLHPSTVDV 343
Query: 272 NVHPTKHEVHFLHEDTIIERV-QSMLEKTLLGSNTSRVFYTQSTSIQVT 319
NVHPTK EV FL+E+ I + S+ EK +SR F Q + + +
Sbjct: 344 NVHPTKREVQFLNEEEIFATIADSVQEKLGQQGGSSRTFQVQVSPVAAS 392
>gi|238499713|ref|XP_002381091.1| DNA mismatch repair protein Mlh1, putative [Aspergillus flavus
NRRL3357]
gi|220692844|gb|EED49190.1| DNA mismatch repair protein Mlh1, putative [Aspergillus flavus
NRRL3357]
Length = 548
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 121/167 (72%), Gaps = 7/167 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFEDL+SI T+GFRGEA
Sbjct: 16 STSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEA 75
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y + KL P K AG GTQI EDLF
Sbjct: 76 LASISHIAHLTVTTKTAGSSCAWRAHYSNGKLVAPKPGQPAAPKATAGRGGTQITVEDLF 135
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLAD 472
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K ++ D
Sbjct: 136 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDSGVD 182
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 85/98 (86%)
Query: 29 NALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFE 88
+ALKEL+EN++DA STS+++ VK GGLKLLQI DNG GI ++D+ I+CERFTTSKL QFE
Sbjct: 2 HALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFE 61
Query: 89 DLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
DL+SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 62 DLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 99
>gi|396465412|ref|XP_003837314.1| similar to DNA mismatch repair protein [Leptosphaeria maculans JN3]
gi|312213872|emb|CBX93874.1| similar to DNA mismatch repair protein [Leptosphaeria maculans JN3]
Length = 774
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 119/165 (72%), Gaps = 9/165 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V VK GGLKLLQI DNG GI KED+ I+CERFTTSKL QFEDL SI T+GFRGEA
Sbjct: 94 STSIEVLVKDGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKQFEDLTSIGTYGFRGEA 153
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLK--------DPIKPCAGNQGTQIIAEDL 424
LASISH+AHL + T+TK S CA+ A Y KL +P KP AG GTQI EDL
Sbjct: 154 LASISHIAHLKVTTRTKESSCAWEAMYAGGKLTSAKPGGSVEP-KPKAGRMGTQITVEDL 212
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNEN 469
FYN+P+RR+A + SEEY KI D+V RYAVH V F+ KK EN
Sbjct: 213 FYNVPSRRRAFRSASEEYAKILDLVGRYAVHCQGVAFSCKKAGEN 257
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 102/125 (81%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA STSI+V VK GGLKLLQI
Sbjct: 52 LPAPRRIKPLSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSIEVLVKDGGLKLLQI 111
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL QFEDL SI T+GFRGEALASISH+AHL + T+TK
Sbjct: 112 TDNGHGIDKEDLPILCERFTTSKLKQFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKE 171
Query: 121 SPCAY 125
S CA+
Sbjct: 172 SSCAW 176
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ +E D + K GW++N N+S K+ LLFIN+ IK+ +EQ Y+++LPK
Sbjct: 285 ELVELEVEDKQWGFKCRGWVSNANYSAKRTHMLLFINHRSVESPAIKKSVEQTYAMFLPK 344
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YLSL ++P+ VDVNVHPTK EVHFL+ED II V + L +TSR F TQ
Sbjct: 345 GGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEDEIIATVCDEIRSGLSKVDTSRSFMTQ 404
Query: 313 S 313
S
Sbjct: 405 S 405
>gi|391338588|ref|XP_003743640.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Metaseiulus
occidentalis]
Length = 628
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 140/210 (66%), Gaps = 5/210 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R + +++ L S +R ST I VT+ GGLKL+QIQD+G GI +EDM IVCE
Sbjct: 22 VIQRPCNAIKEMLENSIDAR-----STKIAVTLNNGGLKLIQIQDDGCGISREDMAIVCE 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSK++ F+DL I+TFGFRGEALASI++VAH+ I TKT+ S Y Y D K +D
Sbjct: 77 RFTTSKISSFDDLKKIATFGFRGEALASITYVAHVKISTKTERSTVGYVCQYSDGKPQDD 136
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KP A N+GT I EDLF+N+P RR A + P++E+ + VVS YAVH P +GF+L K
Sbjct: 137 PKPVAMNRGTTISVEDLFFNVPQRRDAFRSPADEFRRCEAVVSNYAVHFPRIGFSLSKHG 196
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
EN + T NS+ + I +YG I+R +
Sbjct: 197 ENSFAVNTRKNSTVLDNIRTLYGQEIAREL 226
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P +I L + VVNRIAAGEVIQRP NA+KE+LENS+DA+ST I VT+ GGLKL+QIQD
Sbjct: 2 EPNRIHALPKDVVNRIAAGEVIQRPCNAIKEMLENSIDARSTKIAVTLNNGGLKLIQIQD 61
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GI +EDM IVCERFTTSK++ F+DL I+TFGFRGEALASI++VAH+ I TKT+ S
Sbjct: 62 DGCGISREDMAIVCERFTTSKISSFDDLKKIATFGFRGEALASITYVAHVKISTKTERST 121
Query: 123 CAYRWCTY 130
Y C Y
Sbjct: 122 VGY-VCQY 128
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMT-FLLFINN------PIKRMIEQVYSIYLP 251
ELLS+E D+ +K TG++T N+S K+ T +LFINN I+ ++ VY YL
Sbjct: 225 ELLSLEFVDEKISIKATGYVTKANYSNKRRTQLVLFINNRLVECAAIRGCLDVVYQRYLR 284
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
K PFVYLSL M P+NVDVN+HPTK EV FLH++ I+ R+Q +++ L ++SR + T
Sbjct: 285 KDDHPFVYLSLEMPPENVDVNLHPTKSEVGFLHQEYILTRLQEEVDRVLFSCDSSRHYLT 344
Query: 312 QSTSIQVTV 320
+ + + +
Sbjct: 345 KQSVLPAKI 353
>gi|330933250|ref|XP_003304105.1| hypothetical protein PTT_16542 [Pyrenophora teres f. teres 0-1]
gi|311319518|gb|EFQ87802.1| hypothetical protein PTT_16542 [Pyrenophora teres f. teres 0-1]
Length = 734
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 131/190 (68%), Gaps = 8/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++++ VK GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 67 STALEILVKDGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL + T+TK S CA+ A + D KL P KP AG QGT I EDLF
Sbjct: 127 LASISHIAHLKVTTRTKESSCAWEAHFADGKLSSPKPGQTAEPKPKAGRQGTIITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLAD-IRTNVNSSHSEV 484
YN+P+RR+A + SEEY KI ++V RYAVH V F+ KK EN ++ + +S +
Sbjct: 187 YNVPSRRRAFRSASEEYAKILELVGRYAVHCEGVAFSCKKMGENSSNSVTVPAAASAKDR 246
Query: 485 IGNIYGNNIS 494
I I+G++ +
Sbjct: 247 IRQIHGSSAA 256
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 104/133 (78%), Gaps = 2/133 (1%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA ST++++ VK GGLKLLQI
Sbjct: 25 LPAPRRIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEILVKDGGLKLLQI 84
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL + T+TK
Sbjct: 85 TDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKE 144
Query: 121 SPCAYRWCTYLAD 133
S CA W + AD
Sbjct: 145 SSCA--WEAHFAD 155
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 82/127 (64%), Gaps = 8/127 (6%)
Query: 193 ASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN-----PI-KRMIEQVY 246
++ N L L+VE DD + K GW+++ N+S K+ LLFIN+ PI K+ +EQ Y
Sbjct: 254 SAANELVELNVE--DDRWGFKCKGWVSSANYSAKRTQMLLFINHRSVESPIIKKSVEQTY 311
Query: 247 SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
+ +LPKG PF YLSL ++P+ VDVNVHPTK EVHFL+ED II V + L +TS
Sbjct: 312 ATFLPKGGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEDEIIAVVCDSIRDNLSKVDTS 371
Query: 307 RVFYTQS 313
R F TQS
Sbjct: 372 RSFMTQS 378
>gi|134112429|ref|XP_775190.1| hypothetical protein CNBE4630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257842|gb|EAL20543.1| hypothetical protein CNBE4630 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 765
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 132/193 (68%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+++VK GGLKLLQI DNG GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEA
Sbjct: 61 STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA 120
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS+ +H+ ++TKTK C ++A Y D L DP KP A N GT I A DL
Sbjct: 121 LASISYCSHVEVVTKTKNEGCGWKAHYQDGSLIPAKPGGTADP-KPAAANDGTVITAADL 179
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P R++A K S+EYN+I DVV++YA+HNPHV + KK L D+ T V S+
Sbjct: 180 FYNMPLRKRAFKSTSDEYNRIIDVVTKYAIHNPHVAWVCKKAGTALPDVATQVGSNTKAN 239
Query: 485 IGNIYGNNISRRV 497
I +Y + ++ +
Sbjct: 240 IAALYTSALANEL 252
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 100/123 (81%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L + V+N+IAA E+I RP+NA+KELLENSLDA STSI+++VK GGLKLLQI DN
Sbjct: 22 PKPIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDN 81
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEALASIS+ +H+ ++TKTK C
Sbjct: 82 GHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKNEGC 141
Query: 124 AYR 126
++
Sbjct: 142 GWK 144
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 213 KVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K+ GW++N N S +KK +LLFINN +K+ +E Y+ YLPKG+ P+ YLSL +D
Sbjct: 268 KLKGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAVEGHYTSYLPKGASPWAYLSLQID 327
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P +DVNVHPTK EV FL+ED I++ V ++ L G+N SR F Q+
Sbjct: 328 PAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALEGANLSRSFTVQT 375
>gi|405120976|gb|AFR95746.1| DNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 774
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 132/193 (68%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+++VK GGLKLLQI DNG GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEA
Sbjct: 68 STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS+ +H+ ++TKTK C ++A Y D L DP KP A N GT I A DL
Sbjct: 128 LASISYCSHVEVVTKTKNEGCGWKAHYQDGSLVPAKPGGTADP-KPAAANDGTVITAADL 186
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P R++A K S+EYN+I DVV++YA+HNPHV + KK L D+ T V S+
Sbjct: 187 FYNMPLRKRAFKSTSDEYNRIIDVVTKYAIHNPHVAWVCKKAGTALPDVATQVGSNTKAN 246
Query: 485 IGNIYGNNISRRV 497
I +Y + ++ +
Sbjct: 247 IAALYTSALANEL 259
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 100/123 (81%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L + V+N+IAA E+I RP+NA+KELLENSLDA STSI+++VK GGLKLLQI DN
Sbjct: 29 PKPIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDN 88
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEALASIS+ +H+ ++TKTK C
Sbjct: 89 GHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKNEGC 148
Query: 124 AYR 126
++
Sbjct: 149 GWK 151
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 9/125 (7%)
Query: 198 LELLSVEGTDDAFQLKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYL 250
LE+ E K+ GW++N N S +KK +LLFINN +K+ +E Y+ YL
Sbjct: 260 LEIPETELQPPRLGAKLKGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAVEGHYTSYL 319
Query: 251 PKGSFPFVYLS--LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
PKG+ P+ YL L +DP +DVNVHPTK EV FL+ED I++ V ++ L G+N SR
Sbjct: 320 PKGASPWAYLRHVLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTVLEGANLSRS 379
Query: 309 FYTQS 313
F Q+
Sbjct: 380 FTVQT 384
>gi|58268004|ref|XP_571158.1| DNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57227392|gb|AAW43851.1| DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 765
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 132/193 (68%), Gaps = 9/193 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+++VK GGLKLLQI DNG GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEA
Sbjct: 61 STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA 120
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASIS+ +H+ ++TKTK C ++A Y D L DP KP A N GT I A DL
Sbjct: 121 LASISYCSHVEVVTKTKNEGCGWKAHYQDGSLIPAKPGGTADP-KPAAANDGTVITAADL 179
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN+P R++A K S+EYN+I DVV++YA+HNPHV + KK L D+ T V S+
Sbjct: 180 FYNMPLRKRAFKSTSDEYNRIIDVVTKYAIHNPHVAWVCKKAGTALPDVATQVGSNTKAN 239
Query: 485 IGNIYGNNISRRV 497
I +Y + ++ +
Sbjct: 240 IAALYTSALANEL 252
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 100/123 (81%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L + V+N+IAA E+I RP+NA+KELLENSLDA STSI+++VK GGLKLLQI DN
Sbjct: 22 PKPIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDN 81
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ ++CER+ TSKL +FEDL S+ T+GFRGEALASIS+ +H+ ++TKTK C
Sbjct: 82 GHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKNEGC 141
Query: 124 AYR 126
++
Sbjct: 142 GWK 144
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 213 KVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K+ GW++N N S +KK +LLFINN +K+ +E Y+ YLPKG+ P+ YLSL +D
Sbjct: 268 KLKGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAVEGHYTSYLPKGASPWAYLSLQID 327
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P +DVNVHPTK EV FL+ED I++ V ++ L G+N SR F Q+
Sbjct: 328 PAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALEGANLSRSFTVQT 375
>gi|189206011|ref|XP_001939340.1| DNA mismatch repair protein mutL [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975433|gb|EDU42059.1| DNA mismatch repair protein mutL [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 734
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 134/197 (68%), Gaps = 8/197 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++++ VK+GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 67 STALEILVKEGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL + T+TK S CA+ A + D KL P KP AG QGT I EDLF
Sbjct: 127 LASISHIAHLKVTTRTKESSCAWEAHFADGKLSSPKPGQSAEPKPKAGRQGTIITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLAD-IRTNVNSSHSEV 484
YN+P+RR+A + SEEY KI ++V RYAVH V F+ KK EN ++ + +S +
Sbjct: 187 YNVPSRRRAFRSASEEYAKILELVGRYAVHCEGVAFSCKKIGENNSNSVTVPAAASVKDR 246
Query: 485 IGNIYGNNISRRVRRFS 501
I I+G++ + + S
Sbjct: 247 IRQIHGSSAANELVELS 263
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA ST++++ VK+GGLKLLQI
Sbjct: 25 LPAPRRIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEILVKEGGLKLLQI 84
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL + T+TK
Sbjct: 85 TDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKE 144
Query: 121 SPCAYRWCTYLAD 133
S CA W + AD
Sbjct: 145 SSCA--WEAHFAD 155
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 8/127 (6%)
Query: 193 ASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN-----P-IKRMIEQVY 246
++ N L LSVE DD + K GW+++ N++ K+ LLFIN+ P IK+ +EQ Y
Sbjct: 254 SAANELVELSVE--DDRWGFKCKGWVSSANYNAKRTQMLLFINHRSVESPVIKKSVEQTY 311
Query: 247 SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
+ +LPKG PF YLSL ++P+ VDVNVHPTK EVHFL+ED II + + + L +TS
Sbjct: 312 ATFLPKGGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEDEIIAVICDAIRENLSKVDTS 371
Query: 307 RVFYTQS 313
R F TQS
Sbjct: 372 RSFMTQS 378
>gi|389635317|ref|XP_003715311.1| DNA mismatch repair protein mutL [Magnaporthe oryzae 70-15]
gi|351647644|gb|EHA55504.1| DNA mismatch repair protein mutL [Magnaporthe oryzae 70-15]
Length = 690
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 130/185 (70%), Gaps = 9/185 (4%)
Query: 327 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 386
+LQI DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASIS++AHLT+ T
Sbjct: 1 MLQITDNGCGIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISYIAHLTVTT 60
Query: 387 KTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQP 438
KTK S CA+RA Y KL DP KP AG QGTQI EDLFYN+P+RR+A +
Sbjct: 61 KTKDSSCAWRAYYEGGKLAPTKPGQPADP-KPVAGRQGTQITVEDLFYNVPSRRRAFRSF 119
Query: 439 SEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVR 498
S+EYNKI D+V RYAVH V F+ KK E+ I ++ S+ I IYG++++ +
Sbjct: 120 SDEYNKIIDMVGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDRIRQIYGSSVANELI 179
Query: 499 RFSSA 503
FS++
Sbjct: 180 DFSTS 184
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 164/299 (54%), Gaps = 44/299 (14%)
Query: 57 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+LQI DNG GI KED+ I+CERFTTSKL FEDL+SI+T+GFRGEALASIS++AHLT+ T
Sbjct: 1 MLQITDNGCGIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISYIAHLTVTT 60
Query: 117 KTKTSPCAYRWCTY-----LADLMALALMEMSQYLQRDKEQIGDKE-------EKQWYRT 164
KTK S CA W Y LA + R QI ++ ++ +R+
Sbjct: 61 KTKDSSCA--WRAYYEGGKLAPTKPGQPADPKPVAGRQGTQITVEDLFYNVPSRRRAFRS 118
Query: 165 V--EHTLVPLMKSQYQPSEKIVERACLLEIASLNNL----------------------EL 200
E+ + M +Y K V +C S ++ EL
Sbjct: 119 FSDEYNKIIDMVGRYAVHCKGVAFSCKKHGESTTSIAVQAGATVSDRIRQIYGSSVANEL 178
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGS 254
+ +D + K +GW TN N S KK T LLFINN +K+ +EQ Y+ +LPK
Sbjct: 179 IDFSTSDTRWGFKASGWCTNANHSVKKTTLLLFINNRCVESTNVKKSLEQTYAAFLPKNG 238
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF+YLSL +DP+ VDVNVHPTK EV+FL+E+ II+ + L L +TSR F TQ+
Sbjct: 239 HPFLYLSLEIDPQRVDVNVHPTKREVNFLNENEIIQAICENLRTRLAAVDTSRTFRTQT 297
>gi|357604214|gb|EHJ64086.1| mutL-like protein 1 [Danaus plexippus]
Length = 687
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 119/147 (80%), Gaps = 4/147 (2%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +P I+KLDE VVNRIAAGE++QRPANALKEL+ENSLDA S +I +TVK GGLK LQI
Sbjct: 1 MCEPGIIRKLDEEVVNRIAAGEIVQRPANALKELIENSLDAHSNNIIITVKAGGLKYLQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNGTGIR +++DIVCERFTTSKL Q+EDL +IST+GFRGEALASISH+AHLTI+TKT
Sbjct: 61 QDNGTGIRSDNLDIVCERFTTSKLKQYEDLQAISTYGFRGEALASISHIAHLTILTKTAN 120
Query: 121 SPCAYR----WCTYLADLMALALMEMS 143
CAY + T L D L L+++S
Sbjct: 121 EKCAYNEELFYETILYDFQNLGLIKLS 147
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
S +I +TVK GGLK LQIQDNGTGIR +++DIVCERFTTSKL Q+EDL +IST+GFRGE
Sbjct: 42 HSNNIIITVKAGGLKYLQIQDNGTGIRSDNLDIVCERFTTSKLKQYEDLQAISTYGFRGE 101
Query: 372 ALASISHVAHLTIITKTKTSPCAY 395
ALASISH+AHLTI+TKT CAY
Sbjct: 102 ALASISHIAHLTILTKTANEKCAY 125
>gi|452003046|gb|EMD95503.1| hypothetical protein COCHEDRAFT_1126245 [Cochliobolus
heterostrophus C5]
Length = 737
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 118/163 (72%), Gaps = 7/163 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++++ VK GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 63 STALEILVKDGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL + T+TK S CA+ A + D KL P KP AG QGT I EDLF
Sbjct: 123 LASISHIAHLKVTTRTKESSCAWEAHFADGKLISPKPGQSAEPKPKAGRQGTTITVEDLF 182
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
YN+P+RR+A + SEEY KI ++V RYAVH V F+ KK NE
Sbjct: 183 YNVPSRRRAFRSASEEYAKILELVGRYAVHCQGVAFSCKKANE 225
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 104/133 (78%), Gaps = 2/133 (1%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA ST++++ VK GGLKLLQI
Sbjct: 21 LPAPRRIKALSQDVVNKIAAGEIIVAPMHALKELIENAVDAGSTALEILVKDGGLKLLQI 80
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL + T+TK
Sbjct: 81 TDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKE 140
Query: 121 SPCAYRWCTYLAD 133
S CA W + AD
Sbjct: 141 SSCA--WEAHFAD 151
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 8/128 (6%)
Query: 192 IASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
+++ N+L L+VE D + K GWI+N N+S KK LLFIN+ IK+ +EQ
Sbjct: 249 VSAANDLVALNVES--DRWGFKCDGWISNANYSAKKTQMLLFINHRSVESQAIKKSVEQT 306
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+++LPKG PF YLSL ++P+ VDVNVHPTK EVHFL+E+ II V + +L +T
Sbjct: 307 YAMFLPKGGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEEEIINMVCDSIRDSLSKVDT 366
Query: 306 SRVFYTQS 313
SR F TQS
Sbjct: 367 SRSFATQS 374
>gi|451856464|gb|EMD69755.1| hypothetical protein COCSADRAFT_155905 [Cochliobolus sativus
ND90Pr]
Length = 740
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 118/163 (72%), Gaps = 7/163 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++++ VK GGLKLLQI DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEA
Sbjct: 67 STALEILVKDGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDLF 425
LASISH+AHL + T+TK S CA+ A + D KL P KP AG QGT I EDLF
Sbjct: 127 LASISHIAHLKVTTRTKESSCAWEAHFADGKLISPKPGQSAEPKPKAGRQGTTITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
YN+P+RR+A + SEEY KI ++V RYAVH V F+ KK NE
Sbjct: 187 YNVPSRRRAFRSASEEYAKILELVGRYAVHCQGVAFSCKKANE 229
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 104/133 (78%), Gaps = 2/133 (1%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA ST++++ VK GGLKLLQI
Sbjct: 25 LPAPRRIKALSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEILVKDGGLKLLQI 84
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI KED+ I+CERFTTSKL FEDL SI T+GFRGEALASISH+AHL + T+TK
Sbjct: 85 TDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKE 144
Query: 121 SPCAYRWCTYLAD 133
S CA W + AD
Sbjct: 145 SSCA--WEAHFAD 155
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 8/128 (6%)
Query: 192 IASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQV 245
I++ N+L L+VE DD + K GWI+N N+S KK LLFIN+ IK+ +EQ
Sbjct: 253 ISAANDLVALNVE--DDRWGFKCDGWISNANYSAKKTQMLLFINHRSVESQVIKKSVEQT 310
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y ++LPKG PF YLSL ++P+ VDVNVHPTK EVHFL+ED II + + L +T
Sbjct: 311 YGMFLPKGGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEDEIIAMICDSIRDNLSKVDT 370
Query: 306 SRVFYTQS 313
SR F TQS
Sbjct: 371 SRSFVTQS 378
>gi|448124278|ref|XP_004204882.1| Piso0_000167 [Millerozyma farinosa CBS 7064]
gi|358249515|emb|CCE72581.1| Piso0_000167 [Millerozyma farinosa CBS 7064]
Length = 726
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 135/191 (70%), Gaps = 9/191 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I++ VK+GGLKLLQI DNG GI K+DM+I+CERFTTSK+ +++DL IST+GFRGEA
Sbjct: 51 STMIEILVKEGGLKLLQITDNGHGIDKDDMNILCERFTTSKIEKYDDLERISTYGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL------KDP---IKPCAGNQGTQIIAED 423
LASISH++ L++ +KTK SP AY+ Y++ +L DP KP AG GTQI ED
Sbjct: 111 LASISHISRLSVTSKTKASPLAYKCQYVNGQLANSNGRSDPNAEPKPVAGKDGTQITVED 170
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+P+R K+ + S+E++KI DVV+RYAVH VGF+ KK E + T ++ +
Sbjct: 171 LFYNVPSRLKSFRSKSDEFSKIVDVVTRYAVHTKRVGFSCKKFGEPYLVLSTRPQATTED 230
Query: 484 VIGNIYGNNIS 494
I +YG+ I+
Sbjct: 231 KIRTLYGSEIA 241
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 112/131 (85%), Gaps = 1/131 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+LD++VVNRIAAGE+I +PANALKELLENS+DA ST I++ VK+GGLKLLQI DNG
Sbjct: 14 RIKRLDDSVVNRIAAGEIIVQPANALKELLENSIDAGSTMIEILVKEGGLKLLQITDNGH 73
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+DM+I+CERFTTSK+ +++DL IST+GFRGEALASISH++ L++ +KTK SP AY
Sbjct: 74 GIDKDDMNILCERFTTSKIEKYDDLERISTYGFRGEALASISHISRLSVTSKTKASPLAY 133
Query: 126 RWCTYLADLMA 136
+ C Y+ +A
Sbjct: 134 K-CQYVNGQLA 143
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 88/139 (63%), Gaps = 15/139 (10%)
Query: 191 EIAS------LNNLELLSVEGT--DDAFQLKVTGWITNVNF-STKKMTFLLFIN------ 235
EIAS L EL EG+ D L+VTG+++N ++ + KK+T + FIN
Sbjct: 239 EIASELLSINLTGDELSGTEGSPAQDFGLLEVTGFVSNASYLNKKKITHIFFINDRLVSC 298
Query: 236 NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSM 295
NP+KR+I VY +LPKGS PFVYLSL + P+N+DVN+HPTK E+ FLHED I+E ++
Sbjct: 299 NPLKRIINSVYQFFLPKGSHPFVYLSLKIKPENIDVNIHPTKRELRFLHEDDIMELIRDK 358
Query: 296 LEKTLLGSNTSRVFYTQST 314
L L ++ SR F +Q+
Sbjct: 359 LHSLLAATDYSRKFRSQNA 377
>gi|50287749|ref|XP_446304.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525611|emb|CAG59228.1| unnamed protein product [Candida glabrata]
Length = 723
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 135/197 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T +++ V+ GG+KLLQ+ DNG GI+ +D+ ++CERF TSKLT F+DL +I+T+GFRGEA
Sbjct: 40 ATMLEILVRDGGIKLLQVSDNGCGIQLDDLPLLCERFATSKLTNFQDLENIATYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A L++ TKT CAY+ SY + K+ D KP AG GT I EDLFYNIP+R
Sbjct: 100 LASISHIARLSVTTKTNDEQCAYKVSYNEGKMVDKPKPVAGKNGTSIHVEDLFYNIPSRL 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ALK P+EE+ +I DVV RY +H+ +GF+ KK ++ I + + + I +IYGNN
Sbjct: 160 RALKTPNEEFTRILDVVGRYGIHSKGIGFSCKKFGDSSYSITLKPDFTTIDRIRSIYGNN 219
Query: 493 ISRRVRRFSSASQSALA 509
++ + F S L
Sbjct: 220 VATSIIGFEMDSNENLG 236
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD +VVN+IAAGE+I P NALKE+LENS+DA +T +++ V+ GG+KLLQ+ DNG
Sbjct: 3 KIRALDPSVVNKIAAGEIIISPVNALKEILENSIDAGATMLEILVRDGGIKLLQVSDNGC 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+ +D+ ++CERF TSKLT F+DL +I+T+GFRGEALASISH+A L++ TKT CAY
Sbjct: 63 GIQLDDLPLLCERFATSKLTNFQDLENIATYGFRGEALASISHIARLSVTTKTNDEQCAY 122
Query: 126 R 126
+
Sbjct: 123 K 123
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 KVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
KV+G+I+ N + KK + + FIN+ P++R I Y+ YLPKG+ PF+YLS+ +
Sbjct: 239 KVSGYISTSNLNNKKSVQPIFFINDRLVTCDPLRRAIYNTYTNYLPKGTRPFIYLSINIS 298
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
P +VDVNVHPTK EV FLH+D II+ + + + L +T+R F
Sbjct: 299 PPSVDVNVHPTKREVRFLHQDEIIDEITTSINDQLSKLDTTRTF 342
>gi|190346345|gb|EDK38404.2| hypothetical protein PGUG_02502 [Meyerozyma guilliermondii ATCC
6260]
Length = 678
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 135/192 (70%), Gaps = 11/192 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+ + VK GG+KLLQI DNG GI KED+ ++CERF TSKL +FEDL SIST+GFRGEA
Sbjct: 45 STSVDILVKDGGIKLLQITDNGHGIHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL----------KDPIKPCAGNQGTQIIAE 422
LASISH+A L+++TKTKTS AY+A Y+ KL +P KP AG GTQ+ E
Sbjct: 105 LASISHIARLSVVTKTKTSDLAYKAFYLGGKLVGQNFNTNAVAEP-KPTAGTDGTQLTVE 163
Query: 423 DLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
DLFYN+P+R K+LK ++EY+KI DVV RYA+H +VGF+ KK E+ + T + S
Sbjct: 164 DLFYNMPSRLKSLKSKNDEYSKILDVVGRYAIHCQNVGFSCKKYGESHQALSTRPHVSLK 223
Query: 483 EVIGNIYGNNIS 494
E I + G+ I+
Sbjct: 224 ERIRIVQGSAIA 235
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 103/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KLD +V+NRIAAGE+I +PANALKEL+ENS+DA STS+ + VK GG+KLLQI DNG G
Sbjct: 9 ITKLDSSVINRIAAGEIIIQPANALKELIENSIDAGSTSVDILVKDGGIKLLQITDNGHG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ ++CERF TSKL +FEDL SIST+GFRGEALASISH+A L+++TKTKTS AY+
Sbjct: 69 IHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEALASISHIARLSVVTKTKTSDLAYK 128
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 94/148 (63%), Gaps = 12/148 (8%)
Query: 178 QPSEKIVERACLLEIASLNN--LELLSVEGTDDAFQ---LKVTGWITNVNF-STKKMTFL 231
+P + ER +++ +++ N ++L S++ D A L V G IT+ ++ + KK+ +
Sbjct: 217 RPHVSLKERIRIVQGSAIANDLIDLESIKNKDHAKSVGLLSVEGAITSSDYMNKKKVEPV 276
Query: 232 LFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHE 285
LFIN+ P+KR I Y +LPKG+ PF+YLSL ++P+NVDVN+HPTK EV FL+E
Sbjct: 277 LFINHRLVSCGPLKRSILAAYYFFLPKGNHPFIYLSLEIEPRNVDVNIHPTKREVRFLNE 336
Query: 286 DTIIERVQSMLEKTLLGSNTSRVFYTQS 313
D IIE V +++ TL +++R TQ+
Sbjct: 337 DEIIEIVTDLVQSTLSSHDSARKIPTQT 364
>gi|358335505|dbj|GAA54102.1| DNA mismatch repair protein MLH1 [Clonorchis sinensis]
Length = 871
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST IQ+TV+ GGLKLLQ+QDNG GI+ D+ I+CERFTTSKL +F DL+++STFGFRGEA
Sbjct: 67 STQIQITVRAGGLKLLQVQDNGCGIQVSDLPILCERFTTSKLHEFSDLSTLSTFGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHV+ L++ ++T CAYR SY + CAGN+GT I+AEDLFYN P RR
Sbjct: 127 LASLSHVSLLSVTSRTVDQKCAYRMSYRNGNPSGKAAACAGNKGTTILAEDLFYNAPIRR 186
Query: 433 KALKQPSEEYNKIADVVSRYAVH-NPHVGFTLKK----QNENLADIRTNVNSSHSEVIGN 487
A++ P EE+ ++ADVV++YAVH P GF L+ N +D+RT S + +
Sbjct: 187 AAVRSPREEFARVADVVAQYAVHYAPKCGFHLRALNTGSNSTGSDLRTTAGWSRMDAVRA 246
Query: 488 IYGNNISRRVRRFSS 502
+ G+ +++ + F S
Sbjct: 247 VIGSAVAQNLVAFDS 261
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/126 (66%), Positives = 104/126 (82%), Gaps = 3/126 (2%)
Query: 4 PP---KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
PP I+KL + V+NRIAAGEVIQRPANA+KELLEN LDA ST IQ+TV+ GGLKLLQ+
Sbjct: 25 PPTARPIQKLAKDVINRIAAGEVIQRPANAVKELLENCLDAGSTQIQITVRAGGLKLLQV 84
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
QDNG GI+ D+ I+CERFTTSKL +F DL+++STFGFRGEALAS+SHV+ L++ ++T
Sbjct: 85 QDNGCGIQVSDLPILCERFTTSKLHEFSDLSTLSTFGFRGEALASLSHVSLLSVTSRTVD 144
Query: 121 SPCAYR 126
CAYR
Sbjct: 145 QKCAYR 150
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 224 STKKMTFLLFINN------PIKRMIEQVYSIYL--------------------------P 251
+T + LFINN IKR +E YS L P
Sbjct: 295 TTPTLRLSLFINNRMVECTSIKRALESSYSTVLSRTLSSSPGAQSILRRSSGPTSTAFKP 354
Query: 252 KGSFP--FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
GS FVYL+L + P+++DVNVHPTK +V+FL+E+ I+ +Q +E+ LL S R F
Sbjct: 355 GGSHCSLFVYLNLQLPPESLDVNVHPTKAQVNFLNEEQIVNGLQDAVERCLLSSAQVRSF 414
Query: 310 YTQ 312
T+
Sbjct: 415 LTR 417
>gi|254577397|ref|XP_002494685.1| ZYRO0A07282p [Zygosaccharomyces rouxii]
gi|238937574|emb|CAR25752.1| ZYRO0A07282p [Zygosaccharomyces rouxii]
Length = 739
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 131/185 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++S+ + V++GG+KLLQI DNG+GI KED+ I+C RFTTSKL +FEDL I+T+GFRGEA
Sbjct: 41 ASSLDILVREGGIKLLQITDNGSGISKEDLPILCHRFTTSKLAKFEDLEKIATYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A LTI TKT CA+R SY D K+ KP AG GT I+ E+LFYN+P+R
Sbjct: 101 LASISHIARLTITTKTGDDRCAWRVSYSDGKMIGEPKPVAGKDGTVILVENLFYNMPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+AL+ SEEY+KI DVV RYA H+ + F+ KK ++ + N S E I ++G+
Sbjct: 161 RALRSSSEEYSKILDVVGRYACHSEGIAFSCKKFGDSQFALTVRANLSTVERIRCVFGST 220
Query: 493 ISRRV 497
+S ++
Sbjct: 221 VSSKL 225
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 101/121 (83%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LDE+VVN+IAAGE+I P NALKE++ENS+DA ++S+ + V++GG+KLLQI DNG+
Sbjct: 4 KIKPLDESVVNKIAAGEIIISPVNALKEMMENSIDAGASSLDILVREGGIKLLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ I+C RFTTSKL +FEDL I+T+GFRGEALASISH+A LTI TKT CA+
Sbjct: 64 GISKEDLPILCHRFTTSKLAKFEDLEKIATYGFRGEALASISHIARLTITTKTGDDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
Query: 213 KVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
KV G ++N++ S KK ++ + FINN P+ R + Q+YS YLPKG PF+YLS+ ++
Sbjct: 240 KVVGKVSNLDLSFKKSISPVFFINNRLVTCNPLARALRQIYSTYLPKGDKPFMYLSILIN 299
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
P+ +DVN+HPTK EV FLHE+ IIE + S L + L +TSR F T S
Sbjct: 300 PEILDVNIHPTKREVRFLHEEEIIEAISSKLNEELSKIDTSRTFKTSS 347
>gi|159463744|ref|XP_001690102.1| mismatch repair protein [Chlamydomonas reinhardtii]
gi|158284090|gb|EDP09840.1| mismatch repair protein [Chlamydomonas reinhardtii]
Length = 1007
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 13/233 (5%)
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLK 326
+ +D NV V+ + +I+R S L++ L S ST I VTVK GG K
Sbjct: 40 RKLDENV------VNKIAAGEVIQRPASALKEMLENS-----LDAGSTQISVTVKDGGNK 88
Query: 327 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 386
LLQI DNG+GIRKED+ I+C R TTSKL+QFEDL +IST GFRGEAL SIS V+H+ + T
Sbjct: 89 LLQITDNGSGIRKEDLAILCHRHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTT 148
Query: 387 KTKTSPCAYRASYIDSKLKDP-IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKI 445
+ + +R +Y DS ++ P KP A GT I EDLFYN+PTRRKALK SEEY I
Sbjct: 149 MARDAQYGFRVTYKDSAMEAPGPKPVAAVPGTTITVEDLFYNVPTRRKALKSASEEYGLI 208
Query: 446 ADVVSRYAVHN-PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
D + RYAV++ P VGF+ ++ + DI T S + + +YG +++R +
Sbjct: 209 LDTLGRYAVYSAPGVGFSCRRHGDGRPDISTTAAGSRLDAVRAVYGADVAREL 261
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/127 (67%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+KLDE VVN+IAAGEVIQRPA+ALKE+LENSLDA ST I VTVK GG KLLQI DN
Sbjct: 36 PAIIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQITDN 95
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GIRKED+ I+C R TTSKL+QFEDL +IST GFRGEAL SIS V+H+ + T + +
Sbjct: 96 GSGIRKEDLAILCHRHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTTMARDAQY 155
Query: 124 AYRWCTY 130
+R TY
Sbjct: 156 GFR-VTY 161
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 201 LSVEGTDDAFQLKVTGWITNVNF-STKKMTFLLFINN------PIKRMIEQVYSIYLPKG 253
+ VEG +K+ G I+ N+ S KK +LFIN P++R +E VY+ LPK
Sbjct: 276 VPVEGP---LGIKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPKA 332
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
S P+++L L + P+ V+VN+HPTK EV F+H+ +IE ++ +E LL SN SR F T +
Sbjct: 333 SKPWLFLDLRLPPRQVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKLLASNDSRTFATGA 392
Query: 314 TSIQVTV 320
T+ TV
Sbjct: 393 TATLQTV 399
>gi|448121928|ref|XP_004204328.1| Piso0_000167 [Millerozyma farinosa CBS 7064]
gi|358349867|emb|CCE73146.1| Piso0_000167 [Millerozyma farinosa CBS 7064]
Length = 726
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 133/191 (69%), Gaps = 9/191 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I++ VK+GGLKLLQI DNG GI K+DM I+CERFTTSK+ + DL IST+GFRGEA
Sbjct: 51 STMIEILVKEGGLKLLQITDNGHGIDKDDMKILCERFTTSKIETYHDLERISTYGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL------KDP---IKPCAGNQGTQIIAED 423
LASISH++ L++ +KTK SP AY+ Y++ +L DP KP AG GTQI ED
Sbjct: 111 LASISHISRLSVTSKTKASPLAYKCQYVNGQLANSNGRSDPNAEPKPVAGKDGTQITVED 170
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+P+R K+ + S+E++KI DVV+RYAVH VGF+ KK E + T ++ E
Sbjct: 171 LFYNVPSRLKSFRSKSDEFSKIVDVVTRYAVHTNQVGFSCKKFGEPYLVLSTRPQATTEE 230
Query: 484 VIGNIYGNNIS 494
I ++YG+ ++
Sbjct: 231 KIRSLYGSEVA 241
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+LD++VVNRIAAGE+I +PANALKELLENS+DA ST I++ VK+GGLKLLQI DNG
Sbjct: 14 RIKRLDDSVVNRIAAGEIIIQPANALKELLENSIDAGSTMIEILVKEGGLKLLQITDNGH 73
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+DM I+CERFTTSK+ + DL IST+GFRGEALASISH++ L++ +KTK SP AY
Sbjct: 74 GIDKDDMKILCERFTTSKIETYHDLERISTYGFRGEALASISHISRLSVTSKTKASPLAY 133
Query: 126 RWCTYLADLMA 136
+ C Y+ +A
Sbjct: 134 K-CQYVNGQLA 143
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 15/139 (10%)
Query: 191 EIAS-LNNLELLSVE--GTD-----DAFQLKVTGWITNVNF-STKKMTFLLFIN------ 235
E+AS L NL L S E G D D L+VTG+++N ++ + KK+T + FIN
Sbjct: 239 EVASELLNLNLTSEELSGVDRSPTQDFGLLEVTGFVSNSSYLNKKKITHIFFINDRLVSC 298
Query: 236 NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSM 295
NP+KR+I VY +LPKGS PFVYLSL + P+N+DVN+HPTK E+ FL+ED I+E ++
Sbjct: 299 NPLKRIINSVYQFFLPKGSHPFVYLSLKIKPENIDVNIHPTKRELRFLYEDDIMEIIRDK 358
Query: 296 LEKTLLGSNTSRVFYTQST 314
L L +++SR F +Q+
Sbjct: 359 LHSLLAATDSSRKFRSQNA 377
>gi|50307053|ref|XP_453504.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642638|emb|CAH00600.1| KLLA0D09955p [Kluyveromyces lactis]
Length = 724
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 131/183 (71%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T + + VK GG+KLLQI DNG GI K+D+ I+CERFTTSKL FEDL+ I TFGFRGE
Sbjct: 40 KATMVDILVKDGGIKLLQITDNGCGIDKDDLPILCERFTTSKLEVFEDLSKIETFGFRGE 99
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISH+A +T+ TKT+ CA++AS+ + K+ KP AG GT I EDLFYNIP+R
Sbjct: 100 ALASISHIARVTVTTKTEKDQCAWKASFSEGKILGQPKPVAGKTGTIITVEDLFYNIPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
KAL+ P EE+NKI DV+ RY+++N +VGF+ KK ++ + + S + + ++G
Sbjct: 160 LKALRSPGEEFNKILDVIGRYSINNNNVGFSCKKFGDSKVALMIKADLSTKDRVRIVFGA 219
Query: 492 NIS 494
N+S
Sbjct: 220 NVS 222
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE++ P NALKE++ENS+DAK+T + + VK GG+KLLQI DNG
Sbjct: 4 RIKPLDVSVVNKIAAGEIVIAPVNALKEMMENSIDAKATMVDILVKDGGIKLLQITDNGC 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ I+CERFTTSKL FEDL+ I TFGFRGEALASISH+A +T+ TKT+ CA+
Sbjct: 64 GIDKDDLPILCERFTTSKLEVFEDLSKIETFGFRGEALASISHIARVTVTTKTEKDQCAW 123
Query: 126 R 126
+
Sbjct: 124 K 124
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 85/128 (66%), Gaps = 10/128 (7%)
Query: 197 NLELLSVEGTDDAFQ---LKVTGWITNVNFSTKK-MTFLLFIN------NPIKRMIEQVY 246
NL L+++ TDD + L +G++TN++F+ KK + FIN +P++R Q+Y
Sbjct: 224 NLMELNIDITDDVQRNGLLSASGFVTNLDFTNKKPIPPAFFINGRLVSCDPMRRSFYQIY 283
Query: 247 SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
S +LPKG+ PF+Y SL + P+NVDVN+HPTK EV FL+E+ II+R+ +L+ L +TS
Sbjct: 284 SNFLPKGNKPFIYFSLTIKPQNVDVNIHPTKREVRFLNEEEIIDRLAILLQDKLASIDTS 343
Query: 307 RVFYTQST 314
R F T S+
Sbjct: 344 RTFKTASS 351
>gi|72393427|ref|XP_847514.1| mismatch repair protein MLH1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359612|gb|AAX80045.1| mismatch repair protein MLH1 [Trypanosoma brucei]
gi|70803544|gb|AAZ13448.1| mismatch repair protein MLH1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 887
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 191/359 (53%), Gaps = 58/359 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E V+NRIAAGEV+QRP+ ALKELLENSLDA ST IQV V+ GGL+LLQ+ D+G G
Sbjct: 4 IERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDDGHG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---------- 116
IR D+ ++CER+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T
Sbjct: 64 IRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWR 123
Query: 117 --------KTKTSPCA--------------------------YRWCTYLADLM---ALAL 139
+ + PCA C+ + D++ ALA
Sbjct: 124 CHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAF 183
Query: 140 MEMSQYLQR-DKEQIGDKEEKQWYRTVEHTLVPLMKS-QYQPSEKIVERACLLEIASLNN 197
++ +R D G + + +TL + + + + ++ E C E S +N
Sbjct: 184 PSVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPSEDN 243
Query: 198 L---ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSI 248
+L+ G + +TG+ +++ +++K +F+NN I+R ++ VYS
Sbjct: 244 CTPESVLATSGPSGEGRFLITGYTSDITLASRKSYLCVFVNNRLVDSTAIRRALDAVYSG 303
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
L +G+ PF L + + P VDVN+HPTKHEV L E+ I+ ++ ++ L S R
Sbjct: 304 VLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASAARR 362
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R + L++ L S ST IQV V+ GGL+LLQ+ D+G GIR D+ ++CE
Sbjct: 20 VVQRPSAALKELLENS-----LDAGSTCIQVVVQDGGLELLQVTDDGHGIRFGDLPLLCE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T A+R Y+D ++++
Sbjct: 75 RYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWRCHYVDGRMQEE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGN GT I AE +FYN RR+A +PSEE +++ DVVSRYA+ P V F+ ++ +
Sbjct: 135 PKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAFPSVAFSCRRSD 194
Query: 468 ENLADIRTNVNS--SHSEVIGNI---YGNNISRRV 497
++A + N S + NI +G ++ R+
Sbjct: 195 GSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRL 229
>gi|13517948|gb|AAK29067.1|AF346620_1 MLH1 [Trypanosoma brucei]
Length = 887
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 191/359 (53%), Gaps = 58/359 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E V+NRIAAGEV+QRP+ ALKELLENSLDA ST IQV V+ GGL+LLQ+ D+G G
Sbjct: 4 IERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDDGHG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---------- 116
IR D+ ++CER+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T
Sbjct: 64 IRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWR 123
Query: 117 --------KTKTSPCA--------------------------YRWCTYLADLM---ALAL 139
+ + PCA C+ + D++ ALA
Sbjct: 124 CHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAF 183
Query: 140 MEMSQYLQR-DKEQIGDKEEKQWYRTVEHTLVPLMKS-QYQPSEKIVERACLLEIASLNN 197
++ +R D G + + +TL + + + + ++ E C E S +N
Sbjct: 184 PSVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPSEDN 243
Query: 198 L---ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSI 248
+L+ G + +TG+ +++ +++K +F+NN I+R ++ VYS
Sbjct: 244 CTPESVLATSGPSGEGRFLITGYTSDITLASRKSYLCVFVNNRLVDSTAIRRALDAVYSG 303
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
L +G+ PF L + + P VDVN+HPTKHEV L E+ I+ ++ ++ L S R
Sbjct: 304 VLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASAARR 362
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R + L++ L S ST IQV V+ GGL+LLQ+ D+G GIR D+ ++CE
Sbjct: 20 VVQRPSAALKELLENS-----LDAGSTCIQVVVQDGGLELLQVTDDGHGIRFGDLPLLCE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T A+R Y+D ++++
Sbjct: 75 RYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWRCHYVDGRMQEE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGN GT I AE +FYN RR+A +PSEE +++ DVVSRYA+ P V F+ ++ +
Sbjct: 135 PKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAFPSVAFSCRRSD 194
Query: 468 ENLADIRTNVNS--SHSEVIGNI---YGNNISRRV 497
++A + N S + NI +G ++ R+
Sbjct: 195 GSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRL 229
>gi|367000429|ref|XP_003684950.1| hypothetical protein TPHA_0C03640 [Tetrapisispora phaffii CBS 4417]
gi|357523247|emb|CCE62516.1| hypothetical protein TPHA_0C03640 [Tetrapisispora phaffii CBS 4417]
Length = 802
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 140/200 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I V K GG+KLLQI D+G+GI KED+ I+C+RFTTSKL +FEDL SI+T+GFRGEA
Sbjct: 41 STNIDVITKDGGIKLLQISDDGSGIDKEDLPILCQRFTTSKLNKFEDLQSINTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A +T+ TKTK+ CA++ SY + K+ +P AG GT I+ EDLFYN+P+R
Sbjct: 101 LASISHIARVTVTTKTKSDNCAWKVSYAEGKMLGEPQPTAGRDGTVILVEDLFYNMPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
++L+ ++EY+KI DV+ RYAVH+ ++GF+ KK ++ + ++ + I ++G N
Sbjct: 161 RSLRSGNDEYSKIVDVMGRYAVHSENIGFSCKKLGDSNFTLAIRSHAKQQDRIRIVFGKN 220
Query: 493 ISRRVRRFSSASQSALARKA 512
+S + + A L K+
Sbjct: 221 VSSNMTEIAMADDINLELKS 240
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 104/123 (84%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IK LDETVVN+IAAGE+I P NALKE++ENS+DA ST+I V K GG+KLLQI D+
Sbjct: 2 PGRIKALDETVVNKIAAGEIIISPVNALKEMMENSIDANSTNIDVITKDGGIKLLQISDD 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GI KED+ I+C+RFTTSKL +FEDL SI+T+GFRGEALASISH+A +T+ TKTK+ C
Sbjct: 62 GSGIDKEDLPILCQRFTTSKLNKFEDLQSINTYGFRGEALASISHIARVTVTTKTKSDNC 121
Query: 124 AYR 126
A++
Sbjct: 122 AWK 124
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 214 VTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
V G ++++NF KK +T FINN P++R I QVY+ YLPKGS PFVYLSL ++P
Sbjct: 241 VKGQVSDLNFVMKKSVTPTFFINNRLVSCDPLRRSIYQVYTNYLPKGSKPFVYLSLLINP 300
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
K+VDVNVHPTK EV FL++D IIE++ + L + L NTS+ F T S
Sbjct: 301 KSVDVNVHPTKREVRFLNQDEIIEKITTYLNEELSKLNTSKTFKTGS 347
>gi|294660048|ref|XP_462501.2| DEHA2G22022p [Debaryomyces hansenii CBS767]
gi|199434432|emb|CAG91011.2| DEHA2G22022p [Debaryomyces hansenii CBS767]
Length = 797
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 134/189 (70%), Gaps = 10/189 (5%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST I + +K GGLKLLQI DNG GI K+DM ++CERFTTSKL++FEDL SI+T+GFRGE
Sbjct: 80 KSTMIDILIKDGGLKLLQISDNGHGINKDDMCLLCERFTTSKLSKFEDLESIATYGFRGE 139
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP----------IKPCAGNQGTQIIA 421
ALASISH+A L++ITKTK++ A++A Y++ KL + KP AG GTQII
Sbjct: 140 ALASISHIARLSVITKTKSTQLAHKAYYLNGKLTNANFKADVPNVEPKPIAGKDGTQIIV 199
Query: 422 EDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSH 481
EDLFYN+P+R K LK ++E++KI DV+ RYAVH VGF+ KK E+ + T +
Sbjct: 200 EDLFYNVPSRLKTLKSKNDEFSKILDVIGRYAVHTEGVGFSCKKFGESYQVLVTRPTMTL 259
Query: 482 SEVIGNIYG 490
+E I ++G
Sbjct: 260 TERIRTVFG 268
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 106/121 (87%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LD +VVNRIAAGE+I +PANALKELLENS+DAKST I + +K GGLKLLQI DNG
Sbjct: 44 KIKHLDTSVVNRIAAGEIIIQPANALKELLENSIDAKSTMIDILIKDGGLKLLQISDNGH 103
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+DM ++CERFTTSKL++FEDL SI+T+GFRGEALASISH+A L++ITKTK++ A+
Sbjct: 104 GINKDDMCLLCERFTTSKLSKFEDLESIATYGFRGEALASISHIARLSVITKTKSTQLAH 163
Query: 126 R 126
+
Sbjct: 164 K 164
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 7/109 (6%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
++V+G ITN N++ KK + + FIN+ P+KR I +Y +LPKG+ PF+YLSL +
Sbjct: 297 VRVSGAITNSNYNNKKKIQPVFFINHRLVTCEPLKRAISSIYQFFLPKGTQPFMYLSLEI 356
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+P+N+DVNVHPTK EV FL+ED IIE + S + + L ++SR F TQ+
Sbjct: 357 EPQNLDVNVHPTKREVRFLYEDEIIEIISSKVHQLLSSIDSSRKFKTQN 405
>gi|403217376|emb|CCK71870.1| hypothetical protein KNAG_0I00790 [Kazachstania naganishii CBS
8797]
Length = 768
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 133/197 (67%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + + ++ GG+KLLQI DNG GI K D+ ++CERFTTSKL +FEDL SI+T+GFRGEA
Sbjct: 41 ATQVDLLLRDGGIKLLQITDNGCGIEKADLPLLCERFTTSKLGKFEDLESIATYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A +T+ TKT + CA+R+ Y D +++D P AG GT I+ EDLFYN+P+R
Sbjct: 101 LASISHIARVTVTTKTVSDRCAWRSEYTDGEMRDEPAPVAGQDGTTILVEDLFYNVPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+AL+ PS+E+NKI VV +YA+H +VGF+ KK + S E I IYG+N
Sbjct: 161 RALRGPSDEFNKILTVVGKYAIHLNNVGFSCKKFGNAQFSLTVRNQLSMRERIRTIYGSN 220
Query: 493 ISRRVRRFSSASQSALA 509
++ + F L+
Sbjct: 221 VATNLIDFEMDGDDELS 237
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 97/121 (80%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD VVN+IAAGE+I P NA+KELLEN +DA +T + + ++ GG+KLLQI DNG
Sbjct: 4 RIRALDAQVVNKIAAGEIIVSPVNAVKELLENCVDAGATQVDLLLRDGGIKLLQITDNGC 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ ++CERFTTSKL +FEDL SI+T+GFRGEALASISH+A +T+ TKT + CA+
Sbjct: 64 GIEKADLPLLCERFTTSKLGKFEDLESIATYGFRGEALASISHIARVTVTTKTVSDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF--LLFINN------PIKRMIEQVYSI 248
NL ++G D+ + V G ++N+N+++KK T + FINN P++R ++QV++
Sbjct: 224 NLIDFEMDGDDELSLIHVEGQVSNLNYASKKSTTQPIFFINNRLVTCDPLRRSLQQVFTN 283
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG+ PF+YLSL + P+ VDVN+HPTK EV FL +D II ++ L + L +TSR
Sbjct: 284 YLPKGNKPFIYLSLLIKPEVVDVNIHPTKREVRFLKQDEIIAKISLHLSEILKKIDTSRS 343
Query: 309 FYTQS 313
F T +
Sbjct: 344 FKTST 348
>gi|261330774|emb|CBH13759.1| mismatch repair protein MLH1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 887
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 191/359 (53%), Gaps = 58/359 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E V+NRIAAGEV+QRP+ ALKELLENSLDA ST IQV V+ GGL+LLQ+ D+G G
Sbjct: 4 IERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDDGHG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---------- 116
IR D+ ++CER+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T
Sbjct: 64 IRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWR 123
Query: 117 --------KTKTSPCA--------------------------YRWCTYLADLM---ALAL 139
+ + PCA C+ + D++ ALA
Sbjct: 124 CHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAF 183
Query: 140 MEMSQYLQR-DKEQIGDKEEKQWYRTVEHTLVPLMKS-QYQPSEKIVERACLLEIASLNN 197
++ +R D G + + +TL + + + + ++ E C E S +N
Sbjct: 184 PGVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPSEDN 243
Query: 198 L---ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSI 248
+L+ G + +TG+ +++ +++K +F+NN I+R ++ VYS
Sbjct: 244 CTPESVLATSGPSGEGRFLITGYTSDITLASRKSYLCVFVNNRLVDSTAIRRALDAVYSG 303
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
L +G+ PF L + + P VDVN+HPTKHEV L E+ I+ ++ ++ L S R
Sbjct: 304 VLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASAARR 362
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R + L++ L S ST IQV V+ GGL+LLQ+ D+G GIR D+ ++CE
Sbjct: 20 VVQRPSAALKELLENS-----LDAGSTCIQVVVQDGGLELLQVTDDGHGIRFGDLPLLCE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R+ TSKL F++LN+I +FGFRGEAL SIS+VA +T+ T A+R Y+D ++++
Sbjct: 75 RYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTVAWRCHYVDGRMQEE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGN GT I AE +FYN RR+A +PSEE +++ DVVSRYA+ P V F+ ++ +
Sbjct: 135 PKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYALAFPGVAFSCRRSD 194
Query: 468 ENLADIRTNVNS--SHSEVIGNI---YGNNISRRV 497
++A + N S + NI +G ++ R+
Sbjct: 195 GSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRL 229
>gi|403161621|ref|XP_003321931.2| hypothetical protein PGTG_03468 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171858|gb|EFP77512.2| hypothetical protein PGTG_03468 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 648
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 126/179 (70%), Gaps = 9/179 (5%)
Query: 327 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 386
+LQIQDNG+GIRK D+ I+CERFTTSK+ +F+DL+S+ T+GFRGEALASISH+AHLTI T
Sbjct: 1 MLQIQDNGSGIRKADLGILCERFTTSKIRKFDDLSSLCTYGFRGEALASISHIAHLTIAT 60
Query: 387 KTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQP 438
KT++ ++A Y D KL DP +PCAGN GT I ED+FYN+P RRKAL+ P
Sbjct: 61 KTRSEGVGWKAQYSDGKLAPLKAGGPSDP-QPCAGNDGTMITVEDMFYNVPQRRKALQSP 119
Query: 439 SEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
S+EY KI DVV+RYA+HN V + KK D+ T +++ E IG ++ + + +
Sbjct: 120 SDEYRKILDVVTRYAIHNQGVAISCKKTGSASPDVNTTASATILETIGRLFSETLKKEL 178
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 57 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQF-------------EDLNSISTF------- 96
+LQIQDNG+GIRK D+ I+CERFTTSK+ +F E L SIS
Sbjct: 1 MLQIQDNGSGIRKADLGILCERFTTSKIRKFDDLSSLCTYGFRGEALASISHIAHLTIAT 60
Query: 97 -----GFRGEALASISHVAHLTIITKTKTSPCAYRWCTYL-ADLMALALMEMSQYLQRDK 150
G +A S +A L + PCA T + + M + + + LQ
Sbjct: 61 KTRSEGVGWKAQYSDGKLAPLKAGGPSDPQPCAGNDGTMITVEDMFYNVPQRRKALQSPS 120
Query: 151 EQ---IGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLS 202
++ I D + + P A +LE + EL+
Sbjct: 121 DEYRKILDVVTRYAIHNQGVAISCKKTGSASPDVNTTASATILETIGRLFSETLKKELMH 180
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP 256
+E TD KV G+ + N++ KK ++FINN P+++ +E Y LPKG+FP
Sbjct: 181 LEFTDKKLGFKVEGYFSTANYNAKKAITMIFINNRLVDCSPLRKSLEITYQSILPKGNFP 240
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI 316
F+Y+SL + P VD NVHP K EVHFL +D I+ER+ L L GSN+SR + Q+
Sbjct: 241 FIYISLEIAPDRVDPNVHPNKKEVHFLDQDEIVERICDKLNVFLAGSNSSRSYNVQTLLP 300
Query: 317 QVTVKQGGL 325
T G+
Sbjct: 301 MATPDDKGI 309
>gi|255079254|ref|XP_002503207.1| DNA mismatch repair and recombination [Micromonas sp. RCC299]
gi|226518473|gb|ACO64465.1| DNA mismatch repair and recombination [Micromonas sp. RCC299]
Length = 640
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 136/209 (65%), Gaps = 6/209 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I R S L++ L S +TSI VTVK GG KLLQ+ DNG GIR+ D+ I+CE
Sbjct: 22 VIHRPASALKEILENS-----LDAGATSIVVTVKDGGNKLLQVTDNGCGIREADLPILCE 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLK-D 406
R TTSKL++FEDL+++STFGFRGEALASIS VA+LT+ T T+ + A +ASY D L
Sbjct: 77 RHTTSKLSKFEDLSAMSTFGFRGEALASISFVANLTVTTMTRGATHALKASYCDGALDGG 136
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+PCAGN GT I E+LFYN+PTRRKALK P EE+ K+ DVV RYA V FT +K
Sbjct: 137 GARPCAGNPGTTITVENLFYNVPTRRKALKSPHEEFAKVLDVVQRYASSRTDVAFTCRKH 196
Query: 467 NENLADIRTNVNSSHSEVIGNIYGNNISR 495
E + V + + IYG+ ++R
Sbjct: 197 GEARPSLHCAVTPHRIDRLRAIYGSQVAR 225
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 100/119 (84%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P I +L + VVNR+AAGEVI RPA+ALKE+LENSLDA +TSI VTVK GG KLLQ+ D
Sbjct: 2 EPKPIHRLADEVVNRVAAGEVIHRPASALKEILENSLDAGATSIVVTVKDGGNKLLQVTD 61
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
NG GIR+ D+ I+CER TTSKL++FEDL+++STFGFRGEALASIS VA+LT+ T T+ +
Sbjct: 62 NGCGIREADLPILCERHTTSKLSKFEDLSAMSTFGFRGEALASISFVANLTVTTMTRGA 120
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYL 260
D A + V ++ + +++ TF+LFIN+ P++R E VYS LPK PF YL
Sbjct: 241 DRAAEYSVDALVSTAGYHSRRTTFILFINDRLVECAPLRRACEAVYSAILPKAEKPFAYL 300
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
SL + P +DVNVHPTK EV FL +D ++ERVQ LE+ L+ +N SR F + V
Sbjct: 301 SLRLPPHTLDVNVHPTKREVAFLRQDEVVERVQRALERRLVEANGSRTFAVGAV---VGT 357
Query: 321 KQGGLKLLQIQDNGTG 336
++ L+ + + G G
Sbjct: 358 EEAELRGYDVGNGGDG 373
>gi|449687999|ref|XP_004211610.1| PREDICTED: DNA mismatch repair protein Mlh1-like, partial [Hydra
magnipapillata]
Length = 150
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 108/122 (88%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PKI KLDE VVNRIAAGEVIQRP+NA+KE++EN LDAKS SIQVT+K GGLK +QI D+G
Sbjct: 4 PKIIKLDEVVVNRIAAGEVIQRPSNAIKEMIENCLDAKSKSIQVTLKNGGLKFIQILDDG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GIRKEDM IVCERFTTSKL+ F+DL SI+T+GFRGEALASISHVAHLTI ++T SPCA
Sbjct: 64 CGIRKEDMGIVCERFTTSKLSSFDDLKSINTYGFRGEALASISHVAHLTITSRTADSPCA 123
Query: 125 YR 126
Y+
Sbjct: 124 YK 125
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 88/111 (79%), Gaps = 6/111 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+S SIQVT+K GGLK +QI D+G GIRKEDM IVCERFTTSKL+ F+DL SI+T+GFRG
Sbjct: 40 AKSKSIQVTLKNGGLKFIQILDDGCGIRKEDMGIVCERFTTSKLSSFDDLKSINTYGFRG 99
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-----KDPI-KPCAGNQ 415
EALASISHVAHLTI ++T SPCAY+A Y D K+ D + +PCAGN+
Sbjct: 100 EALASISHVAHLTITSRTADSPCAYKAVYEDGKIVAQQGGDAVARPCAGNK 150
>gi|146417610|ref|XP_001484773.1| hypothetical protein PGUG_02502 [Meyerozyma guilliermondii ATCC
6260]
Length = 678
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 134/192 (69%), Gaps = 11/192 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+ + VK GG+KLLQI DNG GI KED+ ++CERF TSKL +FEDL SIST+GFRGEA
Sbjct: 45 STSVDILVKDGGIKLLQITDNGHGIHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL----------KDPIKPCAGNQGTQIIAE 422
LASISH+A L+++TKTKTS AY+A Y+ KL +P KP AG GTQ+ E
Sbjct: 105 LASISHIARLSVVTKTKTSDLAYKAFYLGGKLVGQNFNTNAVAEP-KPTAGTDGTQLTVE 163
Query: 423 DLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
DLFYN+P+R K+LK ++EY+KI DVV RYA+H +VGF+ KK E+ + T +
Sbjct: 164 DLFYNMPSRLKSLKSKNDEYSKILDVVGRYAIHCQNVGFSCKKYGESHQALSTRPHVLLK 223
Query: 483 EVIGNIYGNNIS 494
E I + G+ I+
Sbjct: 224 ERIRIVQGSAIA 235
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 102/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KLD +V+NRIAAGE+I +PANALKEL+EN +DA STS+ + VK GG+KLLQI DNG G
Sbjct: 9 ITKLDSSVINRIAAGEIIIQPANALKELIENLIDAGSTSVDILVKDGGIKLLQITDNGHG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ ++CERF TSKL +FEDL SIST+GFRGEALASISH+A L+++TKTKTS AY+
Sbjct: 69 IHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEALASISHIARLSVVTKTKTSDLAYK 128
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 94/148 (63%), Gaps = 12/148 (8%)
Query: 178 QPSEKIVERACLLEIASLNN--LELLSVEGTDDA---FQLKVTGWITNVNF-STKKMTFL 231
+P + ER +++ +++ N ++L S++ D A L V G IT+ ++ + KK+ +
Sbjct: 217 RPHVLLKERIRIVQGSAIANDLIDLESIKNKDHAKLVGLLSVEGAITSSDYMNKKKVEPV 276
Query: 232 LFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHE 285
LFIN+ P+KR I Y +LPKG+ PF+YLSL ++P+NVDVN+HPTK EV FL+E
Sbjct: 277 LFINHRLVSCGPLKRSILAAYYFFLPKGNHPFIYLSLEIEPRNVDVNIHPTKREVRFLNE 336
Query: 286 DTIIERVQSMLEKTLLGSNTSRVFYTQS 313
D IIE V +++ TL +++R TQ+
Sbjct: 337 DEIIEIVTDLVQLTLSSHDSARKIPTQT 364
>gi|403161619|ref|XP_003890398.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171857|gb|EHS64484.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 542
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 126/179 (70%), Gaps = 9/179 (5%)
Query: 327 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 386
+LQIQDNG+GIRK D+ I+CERFTTSK+ +F+DL+S+ T+GFRGEALASISH+AHLTI T
Sbjct: 1 MLQIQDNGSGIRKADLGILCERFTTSKIRKFDDLSSLCTYGFRGEALASISHIAHLTIAT 60
Query: 387 KTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQP 438
KT++ ++A Y D KL DP +PCAGN GT I ED+FYN+P RRKAL+ P
Sbjct: 61 KTRSEGVGWKAQYSDGKLAPLKAGGPSDP-QPCAGNDGTMITVEDMFYNVPQRRKALQSP 119
Query: 439 SEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
S+EY KI DVV+RYA+HN V + KK D+ T +++ E IG ++ + + +
Sbjct: 120 SDEYRKILDVVTRYAIHNQGVAISCKKTGSASPDVNTTASATILETIGRLFSETLKKEL 178
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 57 LLQIQDNGTGIRKEDMDIVCERFTTSKLTQF-------------EDLNSISTF------- 96
+LQIQDNG+GIRK D+ I+CERFTTSK+ +F E L SIS
Sbjct: 1 MLQIQDNGSGIRKADLGILCERFTTSKIRKFDDLSSLCTYGFRGEALASISHIAHLTIAT 60
Query: 97 -----GFRGEALASISHVAHLTIITKTKTSPCAYRWCTYL-ADLMALALMEMSQYLQRDK 150
G +A S +A L + PCA T + + M + + + LQ
Sbjct: 61 KTRSEGVGWKAQYSDGKLAPLKAGGPSDPQPCAGNDGTMITVEDMFYNVPQRRKALQSPS 120
Query: 151 EQ---IGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLS 202
++ I D + + P A +LE + EL+
Sbjct: 121 DEYRKILDVVTRYAIHNQGVAISCKKTGSASPDVNTTASATILETIGRLFSETLKKELMH 180
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFP 256
+E TD KV G+ + N++ KK ++FINN P+++ +E Y LPKG+FP
Sbjct: 181 LEFTDKKLGFKVEGYFSTANYNAKKAITMIFINNRLVDCSPLRKSLEITYQSILPKGNFP 240
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI 316
F+Y+SL + P VD NVHP K EVHFL +D I+ER+ L L GSN+SR + Q+
Sbjct: 241 FIYISLEIAPDRVDPNVHPNKKEVHFLDQDEIVERICDKLNVFLAGSNSSRSYNVQTLLP 300
Query: 317 QVTVKQGGL 325
T G+
Sbjct: 301 MATPDDKGI 309
>gi|150865217|ref|XP_001384344.2| hypothetical protein PICST_89086 [Scheffersomyces stipitis CBS
6054]
gi|149386473|gb|ABN66315.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 736
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 129/192 (67%), Gaps = 11/192 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++SI + VK GG KLLQI DNG GI KED+ ++CERF TSKL++FEDL SI T+GFRGEA
Sbjct: 39 ASSIDIVVKDGGTKLLQIADNGHGIAKEDLPLLCERFATSKLSRFEDLESIQTYGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLK----------DPIKPCAGNQGTQIIAE 422
LASISH+A L+++TKT TS AY+A Y + KL +P KP AG GTQI E
Sbjct: 99 LASISHIARLSVVTKTATSAVAYKAFYANGKLSGQNFKSSANTEP-KPVAGKVGTQITVE 157
Query: 423 DLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
DLFYN+P R K LK S+E+++I DV+ RYA+H VGF+ KK E + T
Sbjct: 158 DLFYNLPQRLKGLKSKSDEFSRILDVIGRYAIHCKDVGFSCKKHGEPYQILSTRAQLPIK 217
Query: 483 EVIGNIYGNNIS 494
E I I+GN+I+
Sbjct: 218 ERIRTIFGNSIA 229
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 101/120 (84%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E+V+NRIAAGE+I +P NALKE+LENS+DA ++SI + VK GG KLLQI DNG G
Sbjct: 3 IQRLSESVINRIAAGEIIIQPVNALKEMLENSIDAGASSIDIVVKDGGTKLLQIADNGHG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ ++CERF TSKL++FEDL SI T+GFRGEALASISH+A L+++TKT TS AY+
Sbjct: 63 IAKEDLPLLCERFATSKLSRFEDLESIQTYGFRGEALASISHIARLSVVTKTATSAVAYK 122
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 78/118 (66%), Gaps = 9/118 (7%)
Query: 205 GTDDAFQ--LKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSF 255
GTD++ + VTG ITN N++ KK + + FINN P+KR + VY +LPKGS+
Sbjct: 246 GTDNSKYGLISVTGAITNSNYNNKKRIPPVFFINNRLVACEPLKRAVSGVYQFFLPKGSY 305
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PF+YLSL +D +NVDVN+HPTK EV FLHE+ IIE + + L +TSR F TQ+
Sbjct: 306 PFIYLSLQIDAQNVDVNIHPTKREVRFLHEEEIIELIVDKVHLILSSVDTSRKFKTQT 363
>gi|302844875|ref|XP_002953977.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f.
nagariensis]
gi|300260789|gb|EFJ45006.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 151/245 (61%), Gaps = 14/245 (5%)
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
++PF + + +D NV V+ + +I+R S L++ L S +
Sbjct: 7 AWPFPVAPPVI--RKLDENV------VNKIAAGEVIQRPASALKEMLENS-----LDAGA 53
Query: 314 TSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL 373
T I V VK+GG KLLQI DNG G+RKED+ I+C R TTSKL ++EDL +IST GFRGEAL
Sbjct: 54 TQISVLVKEGGNKLLQITDNGCGVRKEDLPILCHRHTTSKLREYEDLETISTLGFRGEAL 113
Query: 374 ASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-IKPCAGNQGTQIIAEDLFYNIPTRR 432
SIS V+H+T+ T + + YR +Y DS+++ P +P A GT I EDLFYN+PTRR
Sbjct: 114 CSISFVSHMTVTTMARGAQYGYRVTYKDSEMEPPGPRPVASVPGTTITVEDLFYNVPTRR 173
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
KALK +EEY I DVV RYAV++ V F+ ++Q ++ DI T S + + ++YG
Sbjct: 174 KALKSANEEYGLILDVVGRYAVYSTGVAFSCRRQGDSRPDISTTATGSRVDAVRSVYGVE 233
Query: 493 ISRRV 497
++R +
Sbjct: 234 VAREL 238
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 99/123 (80%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
PP I+KLDE VVN+IAAGEVIQRPA+ALKE+LENSLDA +T I V VK+GG KLLQI DN
Sbjct: 14 PPVIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGATQISVLVKEGGNKLLQITDN 73
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G G+RKED+ I+C R TTSKL ++EDL +IST GFRGEAL SIS V+H+T+ T + +
Sbjct: 74 GCGVRKEDLPILCHRHTTSKLREYEDLETISTLGFRGEALCSISFVSHMTVTTMARGAQY 133
Query: 124 AYR 126
YR
Sbjct: 134 GYR 136
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFL-LFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
D L V G I+ N+ST K T L LFIN P++R +E +Y LPK S P+++
Sbjct: 256 DGPMGLSVEGLISGANYSTGKKTVLVLFINGRCVECSPLRRALEGLYGALLPKASRPWIF 315
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
L + + P+ V+VN+HPTK EV F+H+ +IE ++ +E LL SN SR F T +T +Q
Sbjct: 316 LDVRLPPRQVEVNMHPTKREVGFMHQAEVIEAIRQAVEAKLLASNESRTFATSAT-LQTQ 374
Query: 320 VKQGGLKLLQIQ 331
+ L L Q Q
Sbjct: 375 LPFASLPLTQRQ 386
>gi|303283872|ref|XP_003061227.1| DNA mismatch repair and recombination [Micromonas pusilla CCMP1545]
gi|226457578|gb|EEH54877.1| DNA mismatch repair and recombination [Micromonas pusilla CCMP1545]
Length = 743
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I R S L++ L +T+I VTVK GG KLLQ+ D+G GIR+ D+ I+CE
Sbjct: 26 VIHRPSSALKELL-----ENALDAGATAITVTVKDGGCKLLQVTDDGVGIRENDLAILCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKD- 406
R TTSKL FEDLN ++TFGFRGEALAS+S VA+LT+ T TK +P A +ASY D L++
Sbjct: 81 RHTTSKLATFEDLNEVATFGFRGEALASMSFVANLTVTTMTKDAPHALKASYRDGVLENG 140
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
PCAG +GT I E+LFYN+PTRRKAL+ P+EEYN+I DVV RYA F ++K
Sbjct: 141 AAMPCAGVKGTTIAVENLFYNVPTRRKALRSPTEEYNRIVDVVQRYASSRTATSFVIRKL 200
Query: 467 NENLADIRTNVNSSHSEVIGNIYGNNISR 495
E + V + + + +YG +++
Sbjct: 201 GEARPALHCPVATERVDRLRAVYGAAVAK 229
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 102/125 (81%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
D+P I++L E VVNR+AAGEVI RP++ALKELLEN+LDA +T+I VTVK GG KLLQ+
Sbjct: 5 DEPRPIRRLAEDVVNRVAAGEVIHRPSSALKELLENALDAGATAITVTVKDGGCKLLQVT 64
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
D+G GIR+ D+ I+CER TTSKL FEDLN ++TFGFRGEALAS+S VA+LT+ T TK +
Sbjct: 65 DDGVGIRENDLAILCERHTTSKLATFEDLNEVATFGFRGEALASMSFVANLTVTTMTKDA 124
Query: 122 PCAYR 126
P A +
Sbjct: 125 PHALK 129
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 6/87 (6%)
Query: 229 TFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
TF+LFIN+ +KR IE VY+ LPK PFVY +L + P+ VDVNVHPTK EVHF
Sbjct: 267 TFVLFINDRLVECAGLKRAIEAVYAAVLPKAEKPFVYAALTLPPRAVDVNVHPTKREVHF 326
Query: 283 LHEDTIIERVQSMLEKTLLGSNTSRVF 309
LH+D +I+ VQ +E L G+N SR F
Sbjct: 327 LHQDELIDEVQRAVEGVLRGANASRTF 353
>gi|443893878|dbj|GAC71334.1| hypothetical protein PANT_2d00060 [Pseudozyma antarctica T-34]
Length = 726
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 142/210 (67%), Gaps = 14/210 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T+K+GG+K+LQIQDNG G++ D+ ++CERF TSKL F DL+S++TFGFRGEA
Sbjct: 57 ATLIRITLKEGGIKMLQIQDNGCGVQPSDLPLLCERFATSKLRDFADLDSMATFGFRGEA 116
Query: 373 LASISHV-AHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGTQIIAED 423
LASIS+V A + ++TKT+ + CAYRA Y + L P KP CAG GT I AED
Sbjct: 117 LASISYVSASMNVVTKTRDNECAYRAYYANGALAPP-KPGQSSEPRQCAGTDGTLITAED 175
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSH 481
LFYN+P RR+AL+ P++EYN+ DVVS+YAVH VGF +K N D+ T + ++
Sbjct: 176 LFYNVPQRRRALRSPADEYNRALDVVSKYAVHYGGRGVGFVCRKAATNATDLNTPSSPTN 235
Query: 482 S--EVIGNIYGNNISRRVRRFSSASQSALA 509
+ + I ++GN ++R + + +AL
Sbjct: 236 TTLDTIRILHGNAVARELVELTDVHDTALG 265
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 108/134 (80%), Gaps = 9/134 (6%)
Query: 2 DQPPK--------IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQG 53
D PP+ I++LDE VVNRIAAGE+I RPANALKEL+ENSLDA +T I++T+K+G
Sbjct: 8 DLPPEAEAARYKPIRRLDENVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEG 67
Query: 54 GLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHV-AHL 112
G+K+LQIQDNG G++ D+ ++CERF TSKL F DL+S++TFGFRGEALASIS+V A +
Sbjct: 68 GIKMLQIQDNGCGVQPSDLPLLCERFATSKLRDFADLDSMATFGFRGEALASISYVSASM 127
Query: 113 TIITKTKTSPCAYR 126
++TKT+ + CAYR
Sbjct: 128 NVVTKTRDNECAYR 141
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINN-----PI-KRMIEQVYSIYLPKGSFPFVYL 260
D A + GWI+ N+S+K+ T L FINN P+ KR IE +Y+ LPKG P++YL
Sbjct: 261 DTALGFQCNGWISGANWSSKRTTLLCFINNRLVDCPLLKRSIEALYATLLPKGGHPWIYL 320
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
SL ++P NVDVNVHPTK EVHFL+ED I+E V + L G+N+SR F
Sbjct: 321 SLSINPANVDVNVHPTKKEVHFLNEDEIVEHVCRAAQHKLAGANSSRTF 369
>gi|460627|gb|AAA16835.1| Mlh1p [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINNPI------KRMIEQVYSI 248
+NL + +D V G + N+NF +KK ++ + FINN + +R + VYS
Sbjct: 223 SNLITFHISKVEDLNLESVDGKVCNLNFISKKSISLIFFINNRLVTCDLLRRALNSVYSN 282
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR
Sbjct: 283 YLPKGFRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRT 342
Query: 309 FYTQSTS 315
F S S
Sbjct: 343 FKASSIS 349
>gi|86161628|gb|ABC86947.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVEGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|6323819|ref|NP_013890.1| mismatch repair ATPase MLH1 [Saccharomyces cerevisiae S288c]
gi|1709056|sp|P38920.2|MLH1_YEAST RecName: Full=DNA mismatch repair protein MLH1; AltName: Full=MutL
protein homolog 1; AltName: Full=Post meiotic
segregation protein 2
gi|825572|emb|CAA89803.1| Mlh1p [Saccharomyces cerevisiae]
gi|86161632|gb|ABC86949.1| MLH1 [Saccharomyces cerevisiae]
gi|256270468|gb|EEU05661.1| Mlh1p [Saccharomyces cerevisiae JAY291]
gi|285814168|tpg|DAA10063.1| TPA: mismatch repair ATPase MLH1 [Saccharomyces cerevisiae S288c]
gi|392297330|gb|EIW08430.1| Mlh1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINNPI------KRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN + +R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161618|gb|ABC86942.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|323303530|gb|EGA57323.1| Mlh1p [Saccharomyces cerevisiae FostersB]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSI 248
+NL + +D V G + N+NF +KK ++ + FINN ++R + VYS
Sbjct: 223 SNLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDXLRRALNSVYSN 282
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR
Sbjct: 283 YLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRT 342
Query: 309 FYTQSTS 315
F S S
Sbjct: 343 FKASSIS 349
>gi|86161620|gb|ABC86943.1| MLH1 [Saccharomyces cerevisiae]
gi|151945868|gb|EDN64100.1| MutL-like protein [Saccharomyces cerevisiae YJM789]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINNPI------KRMIEQVYSI 248
+NL + +D V G + N+NF +KK ++ + FINN + +R + VYS
Sbjct: 223 SNLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSN 282
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR
Sbjct: 283 YLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRT 342
Query: 309 FYTQSTS 315
F S S
Sbjct: 343 FKASSIS 349
>gi|349580453|dbj|GAA25613.1| K7_Mlh1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161624|gb|ABC86945.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161634|gb|ABC86950.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D +V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLERVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAKLSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|392574229|gb|EIW67366.1| hypothetical protein TREMEDRAFT_69817 [Tremella mesenterica DSM
1558]
Length = 741
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 127/190 (66%), Gaps = 9/190 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++TVK+GGLKLLQI DNG GI K D+ ++C R+ TSKL++F DL + T+GFRGEA
Sbjct: 51 STSIKITVKEGGLKLLQIADNGHGINKSDLPLLCTRYATSKLSKFSDLERLQTYGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LAS+S+ +H+ ++TKT+ C ++A Y D L DP +P A N GT I AEDL
Sbjct: 111 LASVSYCSHVEVVTKTRDDGCGWKAHYQDGVLVPSKPGLTPDP-RPTAANDGTVISAEDL 169
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYN R++A K PSEEYN+I DV+++YAVHNPH + KK L DI T S+
Sbjct: 170 FYNNALRKRAFKSPSEEYNRILDVITKYAVHNPHCAWVCKKAGTALPDISTPAASTSRAN 229
Query: 485 IGNIYGNNIS 494
I +YG ++
Sbjct: 230 ISLLYGATLA 239
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 99/123 (80%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P IKKL + V+N+IAA E+I RPANA+KELLENSLDA STSI++TVK+GGLKLLQI DN
Sbjct: 12 PRPIKKLSKDVINQIAAAEIIHRPANAIKELLENSLDAGSTSIKITVKEGGLKLLQIADN 71
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K D+ ++C R+ TSKL++F DL + T+GFRGEALAS+S+ +H+ ++TKT+ C
Sbjct: 72 GHGINKSDLPLLCTRYATSKLSKFSDLERLQTYGFRGEALASVSYCSHVEVVTKTRDDGC 131
Query: 124 AYR 126
++
Sbjct: 132 GWK 134
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 12/136 (8%)
Query: 189 LLEIASLNNLELLSVEGTD----DAFQLKVTGWITNVNFS-TKKMTFLLFINNP------ 237
LL A+L N ELL + T + + G ++N N + +K +LLFIN+
Sbjct: 232 LLYGATLAN-ELLELPKTTLDPIERLGARCEGLVSNANSNWARKGGWLLFINHRLVDSSR 290
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
IK+ ++ +Y+ +LPKG+ P+VYLSL +DP VDVNV PTK EVHFL+ED +IE + ++++
Sbjct: 291 IKKAVDSLYTAFLPKGASPWVYLSLEIDPSKVDVNVSPTKSEVHFLNEDEMIEAIVAVVQ 350
Query: 298 KTLLGSNTSRVFYTQS 313
L G+N SR F Q+
Sbjct: 351 TALAGANVSRSFTVQT 366
>gi|86161612|gb|ABC86939.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVH TK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHLTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161622|gb|ABC86944.1| MLH1 [Saccharomyces cerevisiae]
gi|365763883|gb|EHN05409.1| Mlh1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSI 248
+NL + +D V G + N+NF +KK ++ + FINN P++R + VYS
Sbjct: 223 SNLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSN 282
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR
Sbjct: 283 YLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRT 342
Query: 309 FYTQSTS 315
F S S
Sbjct: 343 FKASSIS 349
>gi|86161626|gb|ABC86946.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVEGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161608|gb|ABC86937.1| MLH1 [Saccharomyces cerevisiae]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIY 249
NL + +D V G + N+NF +KK ++ + FINN P++R + VYS Y
Sbjct: 224 NLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNY 283
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR F
Sbjct: 284 LPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDDIIEKIANQLHAELSAIDTSRTF 343
Query: 310 YTQSTS 315
S S
Sbjct: 344 KASSIS 349
>gi|86161610|gb|ABC86938.1| MLH1 [Saccharomyces cerevisiae]
gi|86161614|gb|ABC86940.1| MLH1 [Saccharomyces cerevisiae]
gi|86161616|gb|ABC86941.1| MLH1 [Saccharomyces cerevisiae]
gi|86161630|gb|ABC86948.1| MLH1 [Saccharomyces cerevisiae]
gi|207342236|gb|EDZ70057.1| YMR167Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148748|emb|CAY81993.1| Mlh1p [Saccharomyces cerevisiae EC1118]
Length = 769
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 118/153 (77%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKK 193
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSI 248
+NL + +D V G + N+NF +KK ++ + FINN P++R + VYS
Sbjct: 223 SNLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSN 282
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRV 308
YLPKG+ PF+YL + +DP VDVNVHPTK EV FL +D IIE++ + L L +TSR
Sbjct: 283 YLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRT 342
Query: 309 FYTQSTS 315
F S S
Sbjct: 343 FKASSIS 349
>gi|241954070|ref|XP_002419756.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36]
gi|223643097|emb|CAX41971.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36]
Length = 713
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T I++ VK GGLKLLQI DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRG
Sbjct: 42 AKATMIEILVKDGGLKLLQITDNGHGISKVDLPLLCERFATSKLSKFEDLESIATYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-----------KDPIKPCAGNQGTQI 419
EALASISH++ L++ITK S AY+A Y++ +L +P KP AG GTQI
Sbjct: 102 EALASISHISRLSVITKQPDSKVAYKAYYMNGQLCSSNFKPSNTNVEP-KPIAGKDGTQI 160
Query: 420 IAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNS 479
I EDLFYNIP+R + LK S+E+ KI D+V RYA+H VGF+ KK + L + T +
Sbjct: 161 IVEDLFYNIPSRLRGLKSKSDEFAKILDIVGRYAIHCETVGFSCKKYGDPLQQVNTRPSM 220
Query: 480 SHSEVIGNIYGNNISRRVRRFSSASQSALA 509
E I +YG+ I+ + S L
Sbjct: 221 PIKERIRVVYGSGIANELLEIDGISNGELG 250
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 103/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+V+N+IAAGE+I +PANALKE+LENS+DAK+T I++ VK GGLKLLQI DNG G
Sbjct: 8 IKRLDESVINKIAAGEIIIQPANALKEMLENSIDAKATMIEILVKDGGLKLLQITDNGHG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ ++CERF TSKL++FEDL SI+T+GFRGEALASISH++ L++ITK S AY+
Sbjct: 68 ISKVDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPDSKVAYK 127
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 10/152 (6%)
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDA--FQLKVTGWITNVNFSTKK- 227
PL + +PS I ER ++ + + N ELL ++G + +KV+G +TN N++ KK
Sbjct: 210 PLQQVNTRPSMPIKERIRVVYGSGIAN-ELLEIDGISNGELGLVKVSGVMTNANYNNKKK 268
Query: 228 MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
+ + FIN+ P+KR I V+S +LPKGS F YLSL + P+N+DVNVHPTK EV
Sbjct: 269 IQPIFFINHRLVTCEPLKRAINAVFSYFLPKGSHSFYYLSLEIKPENLDVNVHPTKREVR 328
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
FL+ED II+ + S + L +TSR F TQS
Sbjct: 329 FLNEDEIIDIIVSEIHTKLSSVDTSRKFKTQS 360
>gi|238881740|gb|EEQ45378.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 717
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T I++ VK GGLKLLQI DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRG
Sbjct: 42 ARATMIEILVKDGGLKLLQITDNGHGISKIDLPLLCERFATSKLSKFEDLESIATYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-----------KDPIKPCAGNQGTQI 419
EALASISH++ L++ITK S AY+A Y++ +L +P KP AG GTQI
Sbjct: 102 EALASISHISRLSVITKQPNSKLAYKAYYMNGQLCSSNFKPSNTNVEP-KPIAGKDGTQI 160
Query: 420 IAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNS 479
I EDLFYNIP+R + LK S+E+ KI D+V RYA+H +VGF+ KK + L + T
Sbjct: 161 IVEDLFYNIPSRLRGLKSKSDEFAKILDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQM 220
Query: 480 SHSEVIGNIYGNNISRRVRRFSSASQSALA 509
E I +YG+ I+ + S L
Sbjct: 221 PIKERIRVVYGSAIANELLEIDGISNDELG 250
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 103/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+V+N+IAAGE+I +PANALKE+LENS+DA++T I++ VK GGLKLLQI DNG G
Sbjct: 8 IKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGHG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ ++CERF TSKL++FEDL SI+T+GFRGEALASISH++ L++ITK S AY+
Sbjct: 68 ISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPNSKLAYK 127
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 96/153 (62%), Gaps = 10/153 (6%)
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG--TDDAFQLKVTGWITNVNFSTKK- 227
PL + +P I ER ++ +++ N ELL ++G D+ +KV+G +TN N++ KK
Sbjct: 210 PLQQVNTRPQMPIKERIRVVYGSAIAN-ELLEIDGISNDELGLVKVSGVMTNANYNNKKK 268
Query: 228 MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
+ ++FIN+ P+KR I V+S +LPKGS F YLSL + P+N+DVNVHPTK EV
Sbjct: 269 IQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFYYLSLEIKPENLDVNVHPTKREVR 328
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
FL+ED II+ + S + L +TSR F TQS
Sbjct: 329 FLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQSV 361
>gi|68486675|ref|XP_712766.1| hypothetical protein CaO19.11638 [Candida albicans SC5314]
gi|68486982|ref|XP_712616.1| hypothetical protein CaO19.4162 [Candida albicans SC5314]
gi|46434019|gb|EAK93441.1| hypothetical protein CaO19.4162 [Candida albicans SC5314]
gi|46434178|gb|EAK93595.1| hypothetical protein CaO19.11638 [Candida albicans SC5314]
Length = 717
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T I++ VK GGLKLLQI DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRG
Sbjct: 42 ARATMIEILVKDGGLKLLQITDNGHGISKIDLPLLCERFATSKLSKFEDLESIATYGFRG 101
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKL-----------KDPIKPCAGNQGTQI 419
EALASISH++ L++ITK S AY+A Y++ +L +P KP AG GTQI
Sbjct: 102 EALASISHISRLSVITKQPNSKLAYKAYYMNGQLCSSNFKSSNTNVEP-KPIAGKDGTQI 160
Query: 420 IAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNS 479
I EDLFYNIP+R + LK S+E+ KI D+V RYA+H +VGF+ KK + L + T
Sbjct: 161 IVEDLFYNIPSRLRGLKSKSDEFAKILDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQM 220
Query: 480 SHSEVIGNIYGNNISRRVRRFSSASQSALA 509
E I +YG+ I+ + S L
Sbjct: 221 PIKERIRVVYGSAIANELLEIDGISNDELG 250
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 103/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+V+N+IAAGE+I +PANALKE+LENS+DA++T I++ VK GGLKLLQI DNG G
Sbjct: 8 IKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGHG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ ++CERF TSKL++FEDL SI+T+GFRGEALASISH++ L++ITK S AY+
Sbjct: 68 ISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPNSKLAYK 127
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 96/153 (62%), Gaps = 10/153 (6%)
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG--TDDAFQLKVTGWITNVNFSTKK- 227
PL + +P I ER ++ +++ N ELL ++G D+ +KV+G +TN N++ KK
Sbjct: 210 PLQQVNTRPQMPIKERIRVVYGSAIAN-ELLEIDGISNDELGLVKVSGVMTNANYNNKKK 268
Query: 228 MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
+ ++FIN+ P+KR I V+S +LPKGS F YLSL + P+N+DVNVHPTK EV
Sbjct: 269 IQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFYYLSLEIKPENLDVNVHPTKREVR 328
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
FL+ED II+ + S + L +TSR F TQS
Sbjct: 329 FLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQSV 361
>gi|325183545|emb|CCA18006.1| DNA mismatch repair protein putative [Albugo laibachii Nc14]
Length = 778
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 134/201 (66%), Gaps = 14/201 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I +T+ QGGLKL+QIQDNG GI ++D++IVCERFTTSKL +FEDL I +FGFRGEA
Sbjct: 45 ATNISITISQGGLKLIQIQDNGKGILRDDLEIVCERFTTSKLQKFEDLCWIQSFGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAH+TI +K CAYRA Y D K DP PCAG GT I+ EDL
Sbjct: 105 LASISHVAHVTITSKPAAQECAYRAKYRDGKPIATCPGSNPDP-APCAGKDGTLIVIEDL 163
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQ---NENLADIRTNVNS 479
FYN+ TRR+ALK +E+Y +I D+V +YA+H + +GF +K N +L ++
Sbjct: 164 FYNLSTRRQALKNAAEQYQRILDIVQKYAIHFASKKIGFVCRKHQGMNCSLNTVQAASLG 223
Query: 480 SHSEVIGNIYGNNISRRVRRF 500
+V+ +I+G ++ + F
Sbjct: 224 KTRQVVQSIFGTKVACELLSF 244
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 101/121 (83%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L VVNRIAAGEVI RP NA+KELLENS+DA +T+I +T+ QGGLKL+QIQDNG
Sbjct: 8 RIKRLSAQVVNRIAAGEVIHRPENAVKELLENSIDAGATNISITISQGGLKLIQIQDNGK 67
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D++IVCERFTTSKL +FEDL I +FGFRGEALASISHVAH+TI +K CAY
Sbjct: 68 GILRDDLEIVCERFTTSKLQKFEDLCWIQSFGFRGEALASISHVAHVTITSKPAAQECAY 127
Query: 126 R 126
R
Sbjct: 128 R 128
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 213 KVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+V G I++ NFS K+ FIN+ +KR E +YSI++PK PF+YLSL M
Sbjct: 262 RVEGLISHANFSLKRGHIFFFINHRLVSCGALKRACEYMYSIHIPKQCHPFLYLSLIMPS 321
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+N+DVNVHPTK EVHFL+E+ I+E + LEK + ++ SR F Q
Sbjct: 322 QNIDVNVHPTKQEVHFLYEEEIVESIVKALEKEIKKNDQSRTFLLQ 367
>gi|384245724|gb|EIE19217.1| DNA mismatch repair protein MutL [Coccomyxa subellipsoidea C-169]
Length = 656
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 184/347 (53%), Gaps = 54/347 (15%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L E V+ +IAAGEVIQRP NA+KELL+N+LDA S+ I + VK+GG K+L +QDNG
Sbjct: 9 PRIVSLGEDVIQQIAAGEVIQRPVNAIKELLDNALDAGSSQINIVVKEGGKKMLSVQDNG 68
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT---- 120
GI+KED+ ++C+R TSKL FEDL+++ST GFRGEALASIS VAHLT+ITK
Sbjct: 69 HGIQKEDLPLLCKRHATSKLRSFEDLDNLSTLGFRGEALASISTVAHLTVITKPPAAVAG 128
Query: 121 ----------------SPCAYR-WCTYLAD-----------LMALALMEMSQYLQR---- 148
SPCA + T++ D + A E ++ L
Sbjct: 129 LKIPYNRNTALEPPGPSPCAAQNGTTFIVDDLFYSNEQRRKALGSAAEEYARILDLLGRY 188
Query: 149 --DKEQIGDKEEKQWYRTVE-HTLVPLMKSQYQPSEKIVERA----CLLEIASLNNLELL 201
+ +G +KQ R + HT+ + Q ++V A LL + E +
Sbjct: 189 AISRPDVGFSCKKQGERRPDLHTVA---GTSAQDIIRVVYGASVAQSLLPVHLEEPGEKM 245
Query: 202 SVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSF 255
F +G+++ ++S +K F++ IN I + +E Y Y +
Sbjct: 246 DTSTAAATFSFTASGFVSCTHYSGRKGIFIIRINGHIVQCKALEHSLEAAYYSY--ARNK 303
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
PFVYL + + VDVNVHPTKHEV FLH++ I+ + LE L G
Sbjct: 304 PFVYLDIKLPGDQVDVNVHPTKHEVVFLHQEEILTCISDALESLLQG 350
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 122/185 (65%), Gaps = 2/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + VK+GG K+L +QDNG GI+KED+ ++C+R TSKL FEDL+++ST GFRGEA
Sbjct: 47 SSQINIVVKEGGKKMLSVQDNGHGIQKEDLPLLCKRHATSKLRSFEDLDNLSTLGFRGEA 106
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP--IKPCAGNQGTQIIAEDLFYNIPT 430
LASIS VAHLT+ITK + + Y + +P PCA GT I +DLFY+
Sbjct: 107 LASISTVAHLTVITKPPAAVAGLKIPYNRNTALEPPGPSPCAAQNGTTFIVDDLFYSNEQ 166
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKAL +EEY +I D++ RYA+ P VGF+ KKQ E D+ T +S ++I +YG
Sbjct: 167 RRKALGSAAEEYARILDLLGRYAISRPDVGFSCKKQGERRPDLHTVAGTSAQDIIRVVYG 226
Query: 491 NNISR 495
++++
Sbjct: 227 ASVAQ 231
>gi|388856708|emb|CCF49668.1| related to MLH1-DNA mismatch repair protein [Ustilago hordei]
Length = 860
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 137/197 (69%), Gaps = 12/197 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T+K+GG+K LQIQDNG+GI+ D+ ++CERF TSKL F DL S+STFGFRGEA
Sbjct: 59 ATLIRITLKEGGIKTLQIQDNGSGIQPSDLPLLCERFATSKLRDFGDLESMSTFGFRGEA 118
Query: 373 LASISHV-AHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDL 424
LASIS+V A + +++KT++ CA+RA Y + L P K CAG GT I AEDL
Sbjct: 119 LASISYVTASMNVVSKTRSQDCAFRAYYANGALAPPKPGQSSDPKQCAGTDGTLITAEDL 178
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSHS 482
FYN+P RR+AL+ P++EYN+ DVVS+YAVH VGF +K N D+ T +S+++
Sbjct: 179 FYNLPQRRRALRSPADEYNRALDVVSKYAVHYGGKGVGFVCRKAASNATDLNTPSSSTNT 238
Query: 483 --EVIGNIYGNNISRRV 497
+ I ++GN ++R +
Sbjct: 239 TLDTIRVLHGNAVAREL 255
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+VVNRIAAGE+I RPANALKEL+ENSLDA +T I++T+K+GG+K LQIQDNG+G
Sbjct: 23 IKRLDESVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEGGIKTLQIQDNGSG 82
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHV-AHLTIITKTKTSPCAY 125
I+ D+ ++CERF TSKL F DL S+STFGFRGEALASIS+V A + +++KT++ CA+
Sbjct: 83 IQPSDLPLLCERFATSKLRDFGDLESMSTFGFRGEALASISYVTASMNVVSKTRSQDCAF 142
Query: 126 R 126
R
Sbjct: 143 R 143
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 6/110 (5%)
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVY 259
+DD GWI+ N+S+K+ T L FINN + KR IE VY+ LPKG ++Y
Sbjct: 262 SDDQLGFSCQGWISGANWSSKRTTLLCFINNRLVDCPLLKRSIEAVYATLLPKGGHAWIY 321
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L++ ++P NVDVNVHPTK EVHFL+ED I+ER+ ++ L G+N+SR F
Sbjct: 322 LAITINPANVDVNVHPTKKEVHFLNEDEIVERICQAAQERLAGANSSRTF 371
>gi|169611282|ref|XP_001799059.1| hypothetical protein SNOG_08751 [Phaeosphaeria nodorum SN15]
gi|111062799|gb|EAT83919.1| hypothetical protein SNOG_08751 [Phaeosphaeria nodorum SN15]
Length = 751
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 133/214 (62%), Gaps = 24/214 (11%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGI----------------RKEDMDIVCERFTTSKLTQ 356
ST+++V VK GGLKLLQI DNG GI +KED+ I+CERFTTSKL
Sbjct: 68 STALEVVVKDGGLKLLQITDNGHGIDVSITIKCSSQPADKAQKEDLPILCERFTTSKLKA 127
Query: 357 FEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-------IK 409
FEDL SI T+GFRGEALASISH+AHL + T+TK S CA+ A Y KL P K
Sbjct: 128 FEDLTSIGTYGFRGEALASISHIAHLRVTTRTKESSCAWEAHYAGGKLASPKPGQTAEPK 187
Query: 410 PCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNEN 469
P AG QGTQI EDLFYN+P+RR+A + SEEY KI ++V +YAVH V F+ KK +N
Sbjct: 188 PKAGRQGTQITVEDLFYNVPSRRRAFRSASEEYAKILELVGKYAVHCLGVSFSCKKAGDN 247
Query: 470 L-ADIRTNVNSSHSEVIGNIYGNNISRRVRRFSS 502
+ + +++ + I I+G ++ + S
Sbjct: 248 SGSSVSVPASATVKDRIRQIHGGAVANELVELKS 281
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 102/141 (72%), Gaps = 16/141 (11%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+ P +IK L + VVN+IAAGE+I P +ALKEL+EN++DA ST+++V VK GGLKLLQI
Sbjct: 26 LPAPRRIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEVVVKDGGLKLLQI 85
Query: 61 QDNGTGI----------------RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALA 104
DNG GI +KED+ I+CERFTTSKL FEDL SI T+GFRGEALA
Sbjct: 86 TDNGHGIDVSITIKCSSQPADKAQKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALA 145
Query: 105 SISHVAHLTIITKTKTSPCAY 125
SISH+AHL + T+TK S CA+
Sbjct: 146 SISHIAHLRVTTRTKESSCAW 166
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPK 252
EL+ ++ DD + K GWI++ N+S K+ + LLFIN+ IK+ +EQ Y+ +LPK
Sbjct: 275 ELVELKSEDDRWGFKCEGWISSANYSAKRTSMLLFINHRAVDSAIIKKSVEQTYAAFLPK 334
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G+ PF YLSL ++P VDVNVHPTK EVHFL+ED I+ + + +L +TSR F TQ
Sbjct: 335 GNHPFFYLSLEIEPARVDVNVHPTKREVHFLNEDEIVAMICDEIRSSLSKVDTSRSFMTQ 394
Query: 313 S 313
S
Sbjct: 395 S 395
>gi|343428862|emb|CBQ72407.1| related to MLH1-DNA mismatch repair protein [Sporisorium reilianum
SRZ2]
Length = 829
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 135/197 (68%), Gaps = 12/197 (6%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T+K+GG+K+LQIQDNG+GI+ D+ ++CERF TSKL F DL S+STFGFRGEA
Sbjct: 57 ATLIRITLKEGGIKMLQIQDNGSGIQPSDLPLLCERFATSKLRDFGDLESMSTFGFRGEA 116
Query: 373 LASISHV-AHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDL 424
LASIS+V A + +++KT+ CAYRA Y + L P K CAG GT I AEDL
Sbjct: 117 LASISYVTASMNVVSKTRHQDCAYRAYYANGSLAPPKPGQSSDPKQCAGTDGTLITAEDL 176
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSHS 482
FYN+P RR+AL+ ++EYN+ DVVS+YAVH VGF +K + N D+ T + + S
Sbjct: 177 FYNVPQRRRALRSAADEYNRALDVVSKYAVHYGGKGVGFVCRKASSNATDLNTPSSPTTS 236
Query: 483 --EVIGNIYGNNISRRV 497
+ I ++GN ++R +
Sbjct: 237 TLDTIRILHGNAVAREL 253
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+VVNRIAAGE+I RPANALKEL+ENSLDA +T I++T+K+GG+K+LQIQDNG+G
Sbjct: 21 IKRLDESVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEGGIKMLQIQDNGSG 80
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHV-AHLTIITKTKTSPCAY 125
I+ D+ ++CERF TSKL F DL S+STFGFRGEALASIS+V A + +++KT+ CAY
Sbjct: 81 IQPSDLPLLCERFATSKLRDFGDLESMSTFGFRGEALASISYVTASMNVVSKTRHQDCAY 140
Query: 126 R 126
R
Sbjct: 141 R 141
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYL 260
DD + GWI+ N+S+K+ T L FINN + KR IE +Y+ LPKG P+VYL
Sbjct: 261 DDNLGFQCQGWISGANWSSKRTTMLCFINNRLVDCPLLKRSIEALYAALLPKGGHPWVYL 320
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
S+ ++P NVDVNVHPTK EVHFLHED I+ER+ + L G+N+SR F + +
Sbjct: 321 SISINPANVDVNVHPTKKEVHFLHEDEIVERICQAAQDRLSGANSSRTFAFSQAVLPILA 380
Query: 321 KQGGL 325
G+
Sbjct: 381 PDAGV 385
>gi|443926589|gb|ELU45202.1| DNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 774
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 137/214 (64%), Gaps = 21/214 (9%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + +TSI++T K GG+KLLQIQDNG GIRK D+ I+CE
Sbjct: 36 IIHRPSSALKELI-----ENALDAGATSIKITAKDGGMKLLQIQDNGCGIRKSDLPILCE 90
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKL F DL I+T+GFRGEALASIS V+HL+++TKT++ CA+RA Y D + P
Sbjct: 91 RFTTSKLRDFSDLQEIATYGFRGEALASISFVSHLSVVTKTRSDACAWRALYEDGVMIAP 150
Query: 408 -----IKP--CAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
+P CAGN GT I AEDLFYN P R+ +L+ EEY +++DVV+RYAVH G
Sbjct: 151 KEGAAAEPVACAGNDGTVITAEDLFYNTPVRKASLRNLGEEYARLSDVVTRYAVH--QAG 208
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
T D+ T + +S S +I ++G ++
Sbjct: 209 AT-------SPDVSTPIGASRSSLIRLLFGAGVA 235
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 106/122 (86%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P IK+LDET+VNRIAAGE+I RP++ALKEL+EN+LDA +TSI++T K GG+KLLQIQDNG
Sbjct: 18 PIIKRLDETLVNRIAAGEIIHRPSSALKELIENALDAGATSIKITAKDGGMKLLQIQDNG 77
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GIRK D+ I+CERFTTSKL F DL I+T+GFRGEALASIS V+HL+++TKT++ CA
Sbjct: 78 CGIRKSDLPILCERFTTSKLRDFSDLQEIATYGFRGEALASISFVSHLSVVTKTRSDACA 137
Query: 125 YR 126
+R
Sbjct: 138 WR 139
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 12/99 (12%)
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
T W N F+ + L + I+R +E VYS +PKG+ L +DPK+VDVNVH
Sbjct: 287 TKWKANAVFTNR-----LVESRRIQRGVEAVYSTIMPKGA-------LEIDPKHVDVNVH 334
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PTK EVHFL+ED I+E + +++ L ++ R F Q+
Sbjct: 335 PTKREVHFLNEDVIVETISDAIQEKLAVQSSQRTFTYQT 373
>gi|71022249|ref|XP_761355.1| hypothetical protein UM05208.1 [Ustilago maydis 521]
gi|46097663|gb|EAK82896.1| hypothetical protein UM05208.1 [Ustilago maydis 521]
Length = 831
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 141/209 (67%), Gaps = 12/209 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++T+K+GG+K+LQIQDNG+GI+ D+ ++CERF TSKL F DL++++TFGFRGEA
Sbjct: 58 ATLIRITLKEGGIKMLQIQDNGSGIQPGDLPLLCERFATSKLRDFGDLDNMATFGFRGEA 117
Query: 373 LASISHV-AHLTIITKTKTSPCAYRASYIDSKLKDP-------IKPCAGNQGTQIIAEDL 424
LASIS+V A + +++KTK CAYRA Y + +L P K CAG GT I AEDL
Sbjct: 118 LASISYVTASMNVVSKTKHQHCAYRAYYANGRLAPPKPGQSADPKQCAGTDGTLITAEDL 177
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVH--NPHVGFTLKKQNENLADIRTNVNSSHS 482
FYN+P RR+AL+ ++EYN+ DVVS+YAVH VGF +K + N D+ T + ++S
Sbjct: 178 FYNVPQRRRALRSAADEYNRALDVVSKYAVHYGGRGVGFVCRKASTNSTDLNTPSSPTNS 237
Query: 483 --EVIGNIYGNNISRRVRRFSSASQSALA 509
+ I ++GN ++R + + S L
Sbjct: 238 TLDTIRILHGNAVARELVELNDVSDDQLG 266
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+LDE+VVNRIAAGE+I RPANALKEL+ENSLDA +T I++T+K+GG+K+LQIQDNG+G
Sbjct: 22 IKRLDESVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEGGIKMLQIQDNGSG 81
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHV-AHLTIITKTKTSPCAY 125
I+ D+ ++CERF TSKL F DL++++TFGFRGEALASIS+V A + +++KTK CAY
Sbjct: 82 IQPGDLPLLCERFATSKLRDFGDLDNMATFGFRGEALASISYVTASMNVVSKTKHQHCAY 141
Query: 126 R 126
R
Sbjct: 142 R 142
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 13/141 (9%)
Query: 191 EIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQ 244
E+ LN++ +DD + GWI+ N+S+K+ T L FINN + KR IE
Sbjct: 253 ELVELNDV-------SDDQLGFQCHGWISGANWSSKRTTLLCFINNRLVECPLLKRSIEA 305
Query: 245 VYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
+Y+ LPKG P+VYLS+ ++P NVDVNVHPTK EVHFLH+D I+E + +K L G+N
Sbjct: 306 LYATLLPKGGHPWVYLSITINPANVDVNVHPTKKEVHFLHQDEIVELICQAAQKRLAGAN 365
Query: 305 TSRVFYTQSTSIQVTVKQGGL 325
+SR F + V G+
Sbjct: 366 SSRTFAFSQAVLPVLAPDVGI 386
>gi|341904321|gb|EGT60154.1| CBN-MLH-1 protein [Caenorhabditis brenneri]
Length = 761
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V V+ GLKLLQ+ DNG GI +ED D+VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 40 ATEIMVNVQNAGLKLLQVTDNGKGIEREDFDLVCERFATSKLHKFEDLMHMKTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVA + I++K CAY+ +++D KL P KP AG GT I A DLFYN+PTRR
Sbjct: 100 LASLSHVAKVNIVSKRAEDKCAYQGNFLDGKLIAPTKPSAGKTGTCITATDLFYNLPTRR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ EE I D++ R+A+H P V F L +QN++ +D RT + S +V+ N+ G +
Sbjct: 160 NKMATHGEETKAIHDILVRFAIHRPDVSFAL-RQNQS-SDFRTKGDGSFRDVVCNLLGRD 217
Query: 493 ISRRV 497
++ V
Sbjct: 218 LADTV 222
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 172/332 (51%), Gaps = 43/332 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I V V+ GLKLLQ+ DNG G
Sbjct: 4 IQRLPPDVVNRMAAGEVLARPCNAIKELIENSLDAGATEIMVNVQNAGLKLLQVTDNGKG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +ED D+VCERF TSKL +FEDL + T+GFRGEALAS+SHVA + I++K CAY+
Sbjct: 64 IEREDFDLVCERFATSKLHKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRAEDKCAYQ 123
Query: 127 WCTYLADLMA------------LALMEMSQYL--QRDKEQIGDKEEKQWYR-----TVEH 167
L+A + ++ L +R+K +E K + +
Sbjct: 124 GNFLDGKLIAPTKPSAGKTGTCITATDLFYNLPTRRNKMATHGEETKAIHDILVRFAIHR 183
Query: 168 TLVPLMKSQYQPSE-------KIVERAC-LLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
V Q Q S+ + C LL + + LS+E T + K TG I+
Sbjct: 184 PDVSFALRQNQSSDFRTKGDGSFRDVVCNLLGRDLADTVVPLSLEST--RLKFKFTGNIS 241
Query: 220 NV----------NFSTKKMTFLLFINNPIKR--MIEQVYSIYLPKGSFPFVYLSLCM--D 265
N + + F +FIN R +++Q L S + SL + D
Sbjct: 242 KPIASATAKLAQNRKSSRSFFSVFINGRSVRCDILKQPIDDVLQNRSLFCQFCSLHLEID 301
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
+DVNVHPTK V FL ++ II+ +++ E
Sbjct: 302 ETRIDVNVHPTKSSVIFLEKEDIIDEIRNYFE 333
>gi|255720707|ref|XP_002545288.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135777|gb|EER35330.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 731
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK GGLKLLQI DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRGEA
Sbjct: 45 ATMIDILVKDGGLKLLQITDNGHGINKVDLPLLCERFATSKLSKFEDLESIATYGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-----------KDPIKPCAGNQGTQIIA 421
LASISH++ L++ITK + S AY+A Y++ KL +P +P AG GTQII
Sbjct: 105 LASISHISRLSVITKQQDSNLAYKAFYMNGKLCGANFKPGAKSTEP-RPTAGKVGTQIIV 163
Query: 422 EDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSH 481
EDLFYNIP+R + LK S+E++KI D+V RYA+H VGF+ KK + L + T
Sbjct: 164 EDLFYNIPSRLRGLKSKSDEFSKILDIVGRYAIHCGDVGFSCKKFGDPLQQLNTRPKLPI 223
Query: 482 SEVIGNIYGNNISRRVRRFSSASQSALA 509
E I +YG+ I+ + + + L
Sbjct: 224 KERIRLVYGSAIANELLDVENIKEEELG 251
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 102/120 (85%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKLDE+V+N+IAAGE+I +PANALKE+LENS+DA +T I + VK GGLKLLQI DNG G
Sbjct: 9 IKKLDESVINKIAAGEIIIQPANALKEMLENSIDANATMIDILVKDGGLKLLQITDNGHG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ ++CERF TSKL++FEDL SI+T+GFRGEALASISH++ L++ITK + S AY+
Sbjct: 69 INKVDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQQDSNLAYK 128
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 93/153 (60%), Gaps = 10/153 (6%)
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGT--DDAFQLKVTGWITNVNFSTKK- 227
PL + +P I ER L+ +++ N ELL VE ++ +KV+G +TN N++ KK
Sbjct: 211 PLQQLNTRPKLPIKERIRLVYGSAIAN-ELLDVENIKEEELGLMKVSGVLTNANYNNKKK 269
Query: 228 MTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
+ + FIN +P+K+ I ++ +LPKGS PF YLSL + P N+DVNVHPTK EV
Sbjct: 270 IQPIFFINHRLVTCDPLKKAINSIFQFFLPKGSHPFYYLSLEIRPDNLDVNVHPTKREVR 329
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
FL+ED II+ + S + L +TSR F TQ+
Sbjct: 330 FLNEDEIIDVIVSKVHGILSSVDTSRKFKTQTV 362
>gi|255716692|ref|XP_002554627.1| KLTH0F09724p [Lachancea thermotolerans]
gi|238936010|emb|CAR24190.1| KLTH0F09724p [Lachancea thermotolerans CBS 6340]
Length = 729
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 126/178 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K+GGLK+LQI DNG+GI K D+ I+C+RFTTSKL FEDL+SI T+GFRGEA
Sbjct: 43 ATAIDILIKEGGLKILQITDNGSGIDKSDLPILCQRFTTSKLKTFEDLSSIQTYGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A +T+ TKTK CA+R SY K+ KP AG GT I+ EDLFYN+ +R
Sbjct: 103 LASISHIARVTVTTKTKNEACAWRVSYSAGKMIGEPKPIAGRDGTIILVEDLFYNVQSRL 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
++L+ P +E+ KI D V RYA+++ +VGF+ KK E+ + ++ E + ++G
Sbjct: 163 RSLRSPGDEFAKILDCVGRYAINSKNVGFSCKKFGESQFALTVRYDADVRERVQAVFG 220
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P KIK L E+VVN+IAAGE+I P NALKE++ENS+DA +T+I + +K+GGLK+LQI
Sbjct: 1 MSAPLKIKPLAESVVNKIAAGEIIVAPVNALKEMMENSIDAGATAIDILIKEGGLKILQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG+GI K D+ I+C+RFTTSKL FEDL+SI T+GFRGEALASISH+A +T+ TKTK
Sbjct: 61 TDNGSGIDKSDLPILCQRFTTSKLKTFEDLSSIQTYGFRGEALASISHIARVTVTTKTKN 120
Query: 121 SPCAYRWCTYLADLM 135
CA+R +Y A M
Sbjct: 121 EACAWR-VSYSAGKM 134
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 11/135 (8%)
Query: 193 ASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQV 245
++L L++ +EG +G ++ +NF KK ++ + FINN P++R + Q
Sbjct: 225 SNLIELKVPEIEG----LGASASGQVSTLNFINKKSISPIFFINNRLVTCDPLRRALYQT 280
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
YS +L KG+ PF+YL++ + P+ VDVNVHPTK EV FLH++ IIE++ S L L +T
Sbjct: 281 YSSHLAKGNRPFIYLNVTIRPELVDVNVHPTKREVRFLHDEEIIEQIASQLGDVLSNCDT 340
Query: 306 SRVFYTQSTSIQVTV 320
SR F T S Q V
Sbjct: 341 SRSFKTTSIFTQKPV 355
>gi|348677435|gb|EGZ17252.1| hypothetical protein PHYSODRAFT_501043 [Phytophthora sojae]
Length = 167
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 104/122 (85%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I++L VVNRIAAGEV+ RPANA+KELLENSLDA +T + VTV QGGLKLLQIQDNG
Sbjct: 6 PRIQRLSPDVVNRIAAGEVVHRPANAVKELLENSLDAGATHVAVTVSQGGLKLLQIQDNG 65
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI+++D+DIVCERFTTSKL FEDL I +FGFRGEALASISHVAH+TI ++T PCA
Sbjct: 66 RGIQRQDLDIVCERFTTSKLKSFEDLKDIKSFGFRGEALASISHVAHVTITSRTADQPCA 125
Query: 125 YR 126
Y+
Sbjct: 126 YK 127
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 90/116 (77%), Gaps = 9/116 (7%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + VTV QGGLKLLQIQDNG GI+++D+DIVCERFTTSKL FEDL I +FGFRGEA
Sbjct: 44 ATHVAVTVSQGGLKLLQIQDNGRGIQRQDLDIVCERFTTSKLKSFEDLKDIKSFGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQII 420
LASISHVAH+TI ++T PCAY+ASY D KL KDP KPCAG GTQI+
Sbjct: 104 LASISHVAHVTITSRTADQPCAYKASYRDGKLVAKKPGESKDP-KPCAGKNGTQIV 158
>gi|117556979|gb|ABK35675.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 756
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 181/337 (53%), Gaps = 42/337 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+IKKL + ++++IAAGEV+QRP+ A+KEL+EN LDA S+ I V + QGGLK L ++DNG
Sbjct: 12 PQIKKLPQELIDKIAAGEVVQRPSAAVKELIENCLDAGSSEISVGLVQGGLKQLIVEDNG 71
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI K+D ++CERF TSK+ +F DL S+ +FGFRGEALASIS V++L I ++ S
Sbjct: 72 SGIHKDDFPLLCERFATSKINEFNDLQSLVSFGFRGEALASISFVSNLKITSRKPNSDLG 131
Query: 125 YRW----------------CT-------------YLADLMALALMEMSQYLQRDKEQIGD 155
Y+ CT Y A +L + E + + + Q
Sbjct: 132 YKASFKNGVMLGEEPEAVNCTEGTTVDVQDLFFNYDARRKSLNVNEEKKRVLKLIGQFAM 191
Query: 156 KEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLL-EIASLNNLELLSVEGTDDAFQLKV 214
K ++ + S ++ R ++ +I + + S E +Q+K
Sbjct: 192 HHAKLRFKFKSDNQIQFSSHSVLGSTELQRREQIMQQITKIADKSFTSCESESTEYQVKF 251
Query: 215 TGWITNVNFSTKKMTFLLFINN------PIKRMIEQVY-----SIYLPKGSFPFVYLSLC 263
G +N+ + K LFINN IK+ +E+ Y SI+ +G + F YLSL
Sbjct: 252 KGTFSNIGATKKYKEITLFINNRLVECESIKKAVERSYQSCYQSIHEEEGGY-FCYLSLE 310
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
M+PKN+D NVHPTK EV FL E I + ++S + + L
Sbjct: 311 MNPKNLDPNVHPTKKEVKFLFEYEIAKEIESWIFENL 347
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I V + QGGLK L ++DNG+GI K+D ++CERF TSK+ +F DL S+ +FGFRGEA
Sbjct: 50 SSEISVGLVQGGLKQLIVEDNGSGIHKDDFPLLCERFATSKINEFNDLQSLVSFGFRGEA 109
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGN--QGTQIIAEDLFYNIPT 430
LASIS V++L I ++ S Y+AS+ + + +P A N +GT + +DLF+N
Sbjct: 110 LASISFVSNLKITSRKPNSDLGYKASFKNGVMLGE-EPEAVNCTEGTTVDVQDLFFNYDA 168
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
RRK+L +EE ++ ++ ++A+H+ + F K N+
Sbjct: 169 RRKSLN-VNEEKKRVLKLIGQFAMHHAKLRFKFKSDNQ 205
>gi|444317230|ref|XP_004179272.1| hypothetical protein TBLA_0B09360 [Tetrapisispora blattae CBS 6284]
gi|387512312|emb|CCH59753.1| hypothetical protein TBLA_0B09360 [Tetrapisispora blattae CBS 6284]
Length = 776
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S +I++ VK GG KLLQI D+G GI KED+ I+CERFTTSKL F+DL+SI T+GFRGEA
Sbjct: 42 SKNIEILVKDGGTKLLQITDDGHGISKEDLSILCERFTTSKLKNFDDLSSIETYGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-KDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASISH+A +++ITKT CA++ +Y+ K+ DPI P AG GT I +DLFYN+P+R
Sbjct: 102 LASISHIAKVSVITKTADDRCAWKTTYLQGKMTSDPI-PTAGKDGTTISVQDLFYNVPSR 160
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
+ LK +EE++KI DV RYA+H+ ++G ++KK + + N + + I +I+G+
Sbjct: 161 LRTLKSSNEEFSKIVDVAGRYAIHSKNIGISVKKLGTSQCTLNIRNNLTTKDRIRSIFGH 220
Query: 492 NISRRV 497
++ +
Sbjct: 221 TVASNI 226
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PKIK LD V+N+IAAGE+I P NALKE+LENS+DA S +I++ VK GG KLLQI D+G
Sbjct: 4 PKIKPLDPDVINKIAAGEIIVSPVNALKEMLENSIDAASKNIEILVKDGGTKLLQITDDG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI KED+ I+CERFTTSKL F+DL+SI T+GFRGEALASISH+A +++ITKT CA
Sbjct: 64 HGISKEDLSILCERFTTSKLKNFDDLSSIETYGFRGEALASISHIAKVSVITKTADDRCA 123
Query: 125 YRWCTYLADLM 135
++ TYL M
Sbjct: 124 WK-TTYLQGKM 133
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 214 VTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+TG ++N+ +KK ++ + FINN P++R + QVYS +LPKG+ F+YLSL +DP
Sbjct: 260 ITGEFNSLNYVSKKAISPIFFINNRLITCDPLRRSLTQVYSGFLPKGNKHFIYLSLVIDP 319
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+NVDVN+HPTK EV FL++D IIE++ L L ++SR F T S
Sbjct: 320 RNVDVNIHPTKREVRFLYQDEIIEKISLYLNGQLSKMDSSRSFATPS 366
>gi|13430732|gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thaliana]
Length = 727
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 135/192 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI V VK GGLKL+Q+ D+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEA
Sbjct: 55 SSSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEA 114
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ K CA +GTQI+ E+LFYN+ RR
Sbjct: 115 LASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARR 174
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D++SR A+H +V F+ +K AD+ + V+ S + I ++YG +
Sbjct: 175 KTLQNSADDYGKIVDLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVS 234
Query: 493 ISRRVRRFSSAS 504
+++ + + +S
Sbjct: 235 VAKNLMKVEVSS 246
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 106/124 (85%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA S+SI V VK GGLKL+Q+ D
Sbjct: 15 EPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSD 74
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEALAS+++VAH+T+ T TK
Sbjct: 75 DGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 134
Query: 123 CAYR 126
YR
Sbjct: 135 HGYR 138
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 14/133 (10%)
Query: 194 SLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYS 247
+L +E+ S + + F ++ G+I+N N+ KK +LFIN+ +KR IE VY+
Sbjct: 238 NLMKVEVSSCDSSGCTFDME--GFISNSNYVAKKTILVLFINDRLVECSALKRAIEIVYA 295
Query: 248 IYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
LPK S PFVY+S+ + ++VD+N+HPTK EV L+++ IIE +QS +E L +N +R
Sbjct: 296 ATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTR 355
Query: 308 VF------YTQST 314
F Y QST
Sbjct: 356 TFQEQKVEYIQST 368
>gi|30680985|ref|NP_567345.2| DNA mismatch repair protein MLH1 [Arabidopsis thaliana]
gi|3893081|emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana]
gi|7267557|emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana]
gi|332657326|gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana]
Length = 737
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 135/192 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI V VK GGLKL+Q+ D+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEA
Sbjct: 65 SSSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ K CA +GTQI+ E+LFYN+ RR
Sbjct: 125 LASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARR 184
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D++SR A+H +V F+ +K AD+ + V+ S + I ++YG +
Sbjct: 185 KTLQNSADDYGKIVDLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVS 244
Query: 493 ISRRVRRFSSAS 504
+++ + + +S
Sbjct: 245 VAKNLMKVEVSS 256
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 106/124 (85%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA S+SI V VK GGLKL+Q+ D
Sbjct: 25 EPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSD 84
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEALAS+++VAH+T+ T TK
Sbjct: 85 DGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 144
Query: 123 CAYR 126
YR
Sbjct: 145 HGYR 148
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 14/133 (10%)
Query: 194 SLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYS 247
+L +E+ S + + F ++ G+I+N N+ KK +LFIN+ +KR IE VY+
Sbjct: 248 NLMKVEVSSCDSSGCTFDME--GFISNSNYVAKKTILVLFINDRLVECSALKRAIEIVYA 305
Query: 248 IYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
LPK S PFVY+S+ + ++VD+N+HPTK EV L+++ IIE +QS +E L +N +R
Sbjct: 306 ATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTR 365
Query: 308 VF------YTQST 314
F Y QST
Sbjct: 366 TFQEQKVEYIQST 378
>gi|222619908|gb|EEE56040.1| hypothetical protein OsJ_04833 [Oryza sativa Japonica Group]
Length = 1120
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 200/351 (56%), Gaps = 60/351 (17%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++S+ V VK GGLKL+Q+ D
Sbjct: 14 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSD 73
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR T K + +G G+ALAS+++V H+T+ T T+
Sbjct: 74 DGHGIR------------THK----------NRWGSEGKALASMTYVGHVTVTTITEGQL 111
Query: 123 CAYRWCTYLADLM-----ALALMEMSQYL----------QRDKEQIGDKEEKQWYRTVEH 167
YR +Y +M A ++ +Q + ++ Q + + + +
Sbjct: 112 HGYR-VSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISR 170
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELL-SVEGTD---DAFQLKVT-------- 215
V + + + RA + ++ + L+ + SV G D ++KV+
Sbjct: 171 FAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIEIKVSYEDAADSI 230
Query: 216 ----GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
G+I+N N+ KK+T +LFIN+ +KR IE VYS LP+ S PF+Y+S+ +
Sbjct: 231 FKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLP 290
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI 316
++VDVN+HPTK EV L+++ IIE +++ +E+ L+ SNT+R+F TQ+ ++
Sbjct: 291 SEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNL 341
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 22/183 (12%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++S+ V VK GGLKL+Q+ D+G GIR T K + +G G+A
Sbjct: 54 ASSVSVAVKDGGLKLIQVSDDGHGIR------------THK----------NRWGSEGKA 91
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQ++ E+LFYN+ R+
Sbjct: 92 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARK 151
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I ++YG +
Sbjct: 152 KTLQNSNDDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGAS 211
Query: 493 ISR 495
+ R
Sbjct: 212 VVR 214
>gi|71991825|ref|NP_499796.2| Protein MLH-1 [Caenorhabditis elegans]
gi|33668505|emb|CAB07283.2| Protein MLH-1 [Caenorhabditis elegans]
Length = 758
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 2/182 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V ++ GGLKLLQ+ DNG GI +ED +VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 40 ATEIMVNMQNGGLKLLQVSDNGKGIEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVA + I++K + CAY+A+++D K+ KP AG GT I A DLFYN+PTRR
Sbjct: 100 LASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ EE + D + R+A+H P V F L +QN+ D RT + + +V+ N+ G +
Sbjct: 160 NKMTTHGEEAKMVNDTLLRFAIHRPDVSFAL-RQNQ-AGDFRTKGDGNFRDVVCNLLGRD 217
Query: 493 IS 494
++
Sbjct: 218 VA 219
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 95/120 (79%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L + VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I V ++ GGLKLLQ+ DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +ED +VCERF TSKL +FEDL + T+GFRGEALAS+SHVA + I++K + CAY+
Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123
>gi|307102530|gb|EFN50802.1| hypothetical protein CHLNCDRAFT_28710 [Chlorella variabilis]
Length = 235
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I VTVK GG LLQIQDNG GIRK+D+ I+C+R TTSKL +FEDL I T GFRGEA
Sbjct: 20 ATQIIVTVKDGGKALLQIQDNGHGIRKDDLPILCQRHTTSKLREFEDLLGIQTLGFRGEA 79
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP-IKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS VA L++ T T+ + +RASY D L+ P +P A N+GT I EDLF+N+P R
Sbjct: 80 LASISFVARLSVTTMTEGAVHGWRASYTDGVLEAPGPRPTAANRGTLISVEDLFWNVPLR 139
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIY 489
+KALK EEY I DV+ RYAV+ V T K+Q E +D+ T +S + I ++
Sbjct: 140 KKALKGVGEEYRHILDVMGRYAVYKAGVSLTCKRQGEARSDLHTLAGASRLDCIRCVW 197
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 81/103 (78%)
Query: 24 IQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSK 83
+QRPA+ALKE+LENSLDA +T I VTVK GG LLQIQDNG GIRK+D+ I+C+R TTSK
Sbjct: 1 LQRPASALKEMLENSLDAGATQIIVTVKDGGKALLQIQDNGHGIRKDDLPILCQRHTTSK 60
Query: 84 LTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
L +FEDL I T GFRGEALASIS VA L++ T T+ + +R
Sbjct: 61 LREFEDLLGIQTLGFRGEALASISFVARLSVTTMTEGAVHGWR 103
>gi|412991416|emb|CCO16261.1| MLH1 [Bathycoccus prasinos]
Length = 822
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + K GG KLLQI DNG GIR+ED++IVCER TTSKL +FEDL ++ TFGFRGEA
Sbjct: 52 ATQISILCKDGGKKLLQITDNGIGIREEDLEIVCERHTTSKLEKFEDLEAMETFGFRGEA 111
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP-CAGNQGTQIIAEDLFYNIPTR 431
LAS+++VA +TI T CA++ASY D K+++ K CAG GT I E+LFYN+ TR
Sbjct: 112 LASMTYVADVTITTARSGGKCAWKASYRDGKMREGTKEMCAGVTGTTIAVENLFYNVKTR 171
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADI 473
R ALK +EEY KI DVV+RYA P V F+ +K E A +
Sbjct: 172 RNALKSGAEEYAKILDVVTRYASSRPDVAFSCRKVGETRATV 213
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 97/124 (78%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q +IK+L E+VVNR+AAGEVI P +ALKEL+ENSLDA +T I + K GG KLLQI D
Sbjct: 12 QVKEIKRLPESVVNRVAAGEVIHGPHSALKELIENSLDASATQISILCKDGGKKLLQITD 71
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GIR+ED++IVCER TTSKL +FEDL ++ TFGFRGEALAS+++VA +TI T
Sbjct: 72 NGIGIREEDLEIVCERHTTSKLEKFEDLEAMETFGFRGEALASMTYVADVTITTARSGGK 131
Query: 123 CAYR 126
CA++
Sbjct: 132 CAWK 135
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 8/112 (7%)
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSF--PFVYLS 261
F ++ +N N+ KK TF+LFIN + +KR IE Y LP S PFV+LS
Sbjct: 289 FHMECDILYSNANYKAKKTTFILFINGRLVECSALKRAIETAYQSVLPSSSREKPFVFLS 348
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ + K+VDVNVHPTK EVHF+H++ I+ERVQ+ LEK L+ SN +R F Q+
Sbjct: 349 MKLPFKDVDVNVHPTKREVHFMHQEEIVERVQTALEKALVKSNAARTFTVQT 400
>gi|296815758|ref|XP_002848216.1| DNA mismatch repair protein [Arthroderma otae CBS 113480]
gi|238841241|gb|EEQ30903.1| DNA mismatch repair protein [Arthroderma otae CBS 113480]
Length = 763
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 175/359 (48%), Gaps = 92/359 (25%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++
Sbjct: 33 RPRKIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILA------------ 80
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
FEDL+SI+T+GFRGEALASISHVAHLT+ TKT+
Sbjct: 81 ------------------------FEDLSSIATYGFRGEALASISHVAHLTVT--TKTAG 114
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPS 180
+ C + A L+ + I + Q TVE VP + ++ +
Sbjct: 115 SS---CAWRAHYSDGKLVPAKPGQNAAPKPIAGRRGTQI--TVEDLFYNVPTRRRAFRSA 169
Query: 181 EK----------------------------------------IVERACLLEIASLNNLEL 200
+ IV+R L ++ N EL
Sbjct: 170 SEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTSINSSIVDRIRQLHGGAVAN-EL 228
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+S+E + + W+TN N+ K+ T L+FIN+ IKR +EQ YS +LPKG
Sbjct: 229 VSLEVDGKKWGCHTSAWVTNANYHAKRTTLLIFINHRSVESTAIKRAVEQTYSTFLPKGG 288
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
PFVYL L ++P+ +DVNVHPTK EV+FL+ED IIE + + L ++SR F TQ+
Sbjct: 289 HPFVYLDLNIEPQRLDVNVHPTKREVNFLNEDEIIESICGAIRTKLAAVDSSRTFMTQT 347
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 101/152 (66%), Gaps = 7/152 (4%)
Query: 350 TTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL----- 404
T+ ++ FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S CA+RA Y D KL
Sbjct: 74 TSVEILAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKP 133
Query: 405 --KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFT 462
KP AG +GTQI EDLFYN+PTRR+A + SEEY KI D+V RYAVH F+
Sbjct: 134 GQNAAPKPIAGRRGTQITVEDLFYNVPTRRRAFRSASEEYAKILDIVGRYAVHCSGTAFS 193
Query: 463 LKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
KK E + T++NSS + I ++G ++
Sbjct: 194 CKKHGEAGVSLSTSINSSIVDRIRQLHGGAVA 225
>gi|242207940|ref|XP_002469822.1| predicted protein [Postia placenta Mad-698-R]
gi|220731053|gb|EED84901.1| predicted protein [Postia placenta Mad-698-R]
Length = 709
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 105/120 (87%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E+V+NRIAAGE+I RPA+ALKEL+ENSLDA+STSI+VTVK GG++LLQIQDNG G
Sbjct: 16 IRRLQESVINRIAAGEIIHRPASALKELIENSLDAQSTSIRVTVKDGGMRLLQIQDNGCG 75
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK D+ I+ ERFTTSKL+ F DL I+T+GFRGEALASIS+VAHL ++TKTK CA++
Sbjct: 76 IRKTDLPILAERFTTSKLSSFSDLAHIATYGFRGEALASISYVAHLMVVTKTKADACAWK 135
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 29/228 (12%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II R S L++ + S QSTSI+VTVK GG++LLQIQDNG GIRK D+ I+ E
Sbjct: 32 IIHRPASALKELIENS-----LDAQSTSIRVTVKDGGMRLLQIQDNGCGIRKTDLPILAE 86
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL--- 404
RFTTSKL+ F DL I+T+GFRGEALASIS+VAHL ++TKTK CA++A Y D L
Sbjct: 87 RFTTSKLSSFSDLAHIATYGFRGEALASISYVAHLMVVTKTKADACAWKAIYTDGALAPT 146
Query: 405 -----KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
+P K AG GT I +++N R +P +Y+ + S+
Sbjct: 147 KGATSAEP-KATAGTDGTTIT---VWHNALARMSG--KPVLQYSDASVSASQL------- 193
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSA 507
++ + ++ T S+ + I +YG I++ + + +SQSA
Sbjct: 194 ---FRRAGSSGPEVSTPSGSTTEQAIRLLYGQTIAKDLLHTTVSSQSA 238
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 14/136 (10%)
Query: 218 ITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
TN ++ KKM LLFIN+ IK+ +E VY+ LPK LSL +DP+ VDV
Sbjct: 263 FTNAHYQAKKMVLLLFINHRLVDSPRIKKALENVYTGILPKVKSTKDMLSLQIDPRAVDV 322
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQ 331
NVHPTK EVHFL ED IIER+ L++ L+G + SRVF Q T+ GG+ +Q +
Sbjct: 323 NVHPTKREVHFLDEDVIIERIADALQQKLVGQSQSRVFEYQ------TLLTGGIAEVQ-R 375
Query: 332 DNGTGIRKEDMDIVCE 347
D G G ++ +D+ E
Sbjct: 376 DKGKG-KERQIDLPME 390
>gi|268576302|ref|XP_002643131.1| C. briggsae CBR-MLH-1 protein [Caenorhabditis briggsae]
Length = 765
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V ++ GGLK LQ+ DNG GI +ED ++VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 44 ATEIKVMMQNGGLKTLQVSDNGKGIEREDFELVCERFATSKLQKFEDLMHMKTYGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVA + I++K + CAY+ +++D KL P KP AG GT I A DLFYN+PTRR
Sbjct: 104 LASLSHVAKVNIVSKRADAKCAYQGNFLDGKLLAPTKPAAGKNGTCITATDLFYNLPTRR 163
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNI 488
+ EE + D + R+A+H P V F L QN++ +D RT + + +V+ N
Sbjct: 164 NKMTTHGEEAKMVYDTLLRFAIHRPDVSFAL-HQNQS-SDFRTKGDGNFRDVVCNF 217
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 162/314 (51%), Gaps = 42/314 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I+V ++ GGLK LQ+ DNG G
Sbjct: 8 IQRLPEDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIKVMMQNGGLKTLQVSDNGKG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +ED ++VCERF TSKL +FEDL + T+GFRGEALAS+SHVA + I++K + CAY+
Sbjct: 68 IEREDFELVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 127
Query: 127 WCTYLADLMA------------LALMEMSQYL--QRDKEQIGDKEEKQWYRT-----VEH 167
L+A + ++ L +R+K +E K Y T +
Sbjct: 128 GNFLDGKLLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVYDTLLRFAIHR 187
Query: 168 TLVPLMKSQYQPSE-------KIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN 220
V Q Q S+ + C L + +S++ + + K TG I+
Sbjct: 188 PDVSFALHQNQSSDFRTKGDGNFRDVVCNFPSKILQTVIPISLDS--NRLKFKFTGKISK 245
Query: 221 V----------NFSTKKMTFLLFINNPIKR--MIEQVYSIYLPKGSF--PFVYLSLCMDP 266
N T + F +FIN R +++ L S F L L +D
Sbjct: 246 PIASATSKNAQNRKTSRSFFSVFINGRSVRCDILKHPIDDVLQNRSLCVQFCALHLEIDE 305
Query: 267 KNVDVNVHPTKHEV 280
+DVNVHPTK V
Sbjct: 306 TRIDVNVHPTKSSV 319
>gi|256072195|ref|XP_002572422.1| DNA mismatch repair protein MLH1 [Schistosoma mansoni]
gi|353230194|emb|CCD76365.1| putative DNA mismatch repair protein MLH1 [Schistosoma mansoni]
Length = 918
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I++TVK GGLKL+Q+QDNG GI + D+ I+CERFTTSKL +F DL+ ISTFGFRGEA
Sbjct: 65 STMIKITVKDGGLKLIQVQDNGCGIHQSDLPILCERFTTSKLKEFSDLSKISTFGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+S+SHVA +T+ T+T CA++ Y + PCAGN GT I+AE+LFYN P R+
Sbjct: 125 LSSLSHVALVTVTTRTANQNCAFKVKYRAGVAESKPVPCAGNPGTTIVAENLFYNAPIRK 184
Query: 433 KALKQPSEEYNKIADVVSRYAVHNP-HVGFTLKKQNEN-----LADIRTNVNSSHSEVIG 486
ALK EE +K+ +VV++YA+H GF L ++ D+RT+ S + I
Sbjct: 185 SALKNGREELSKVTEVVAQYAIHYAQQCGFHLHSESATGKSSIEQDLRTSAGWSRMDAIR 244
Query: 487 NIYGNNISRRV 497
+ G++I + +
Sbjct: 245 AVIGSSIEQNL 255
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 102/123 (82%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P IK+L + V+NRIAAGEVIQRP NA+KELLENS+DA ST I++TVK GGLKL+Q+QDN
Sbjct: 26 PQTIKRLPKEVINRIAAGEVIQRPVNAIKELLENSIDAGSTMIKITVKDGGLKLIQVQDN 85
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI + D+ I+CERFTTSKL +F DL+ ISTFGFRGEAL+S+SHVA +T+ T+T C
Sbjct: 86 GCGIHQSDLPILCERFTTSKLKEFSDLSKISTFGFRGEALSSLSHVALVTVTTRTANQNC 145
Query: 124 AYR 126
A++
Sbjct: 146 AFK 148
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 38/128 (29%)
Query: 232 LFINN------PIKRMIEQVYSIYLPKG------------------------------SF 255
LFINN PIKR++E YS + +G +F
Sbjct: 302 LFINNRLVSCTPIKRIVECAYSSVISRGLSSNSTDHQAVLTNKKFKISTNSNIMYKSSTF 361
Query: 256 P--FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+VYL++ + +DVNVHPTK EV+FLHED I+ +Q +E+ LL S + F
Sbjct: 362 NSLYVYLNIQLPVHTLDVNVHPTKAEVNFLHEDEIVNGLQDAVEQALLSSAQIQTFVRNC 421
Query: 314 TSIQVTVK 321
+T K
Sbjct: 422 LPTPITFK 429
>gi|308490925|ref|XP_003107654.1| CRE-MLH-1 protein [Caenorhabditis remanei]
gi|308250523|gb|EFO94475.1| CRE-MLH-1 protein [Caenorhabditis remanei]
Length = 1082
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 124/194 (63%), Gaps = 11/194 (5%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V ++ GGLKLLQ+ DNG GI ++D D+VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 40 ATEIMVNMQNGGLKLLQVSDNGKGIERDDFDLVCERFATSKLQKFEDLMHMKTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI---------DSKLKDPIKPCAGNQGTQIIAED 423
LAS+SHV+ + I++K + CAY+A+Y+ D K+ P KP AG GT I A D
Sbjct: 100 LASLSHVSKVNIVSKREDGKCAYQANYLGEKQRKSAQDGKMLAPTKPAAGKNGTCITATD 159
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
LFYN+PTRR + EE + D + R+A+H P V F L QN++ +D RT + +
Sbjct: 160 LFYNLPTRRNKMTTHGEESKMVHDTILRFAIHRPDVSFAL-HQNQS-SDFRTKGDGNFRN 217
Query: 484 VIGNIYGNNISRRV 497
V+ + G +++ V
Sbjct: 218 VVCTLLGRDLADTV 231
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L + VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I V ++ GGLKLLQ+ DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D D+VCERF TSKL +FEDL + T+GFRGEALAS+SHV+ + I++K + CAY+
Sbjct: 64 IERDDFDLVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVSKVNIVSKREDGKCAYQ 123
Query: 127 WCTYLAD 133
YL +
Sbjct: 124 -ANYLGE 129
>gi|302664970|ref|XP_003024108.1| DNA mismatch repair protein, putative [Trichophyton verrucosum HKI
0517]
gi|291188140|gb|EFE43490.1| DNA mismatch repair protein, putative [Trichophyton verrucosum HKI
0517]
Length = 878
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 126/198 (63%), Gaps = 18/198 (9%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ V++GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI+T+GFRGEA
Sbjct: 121 STSVEILVREGGLKLLQITDNGHGIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEA 180
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISHVAHLT+ TKT S CA+RA Y D KL P KP AG +GTQI
Sbjct: 181 LASISHVAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQNASP-KPIAGRKGTQITVSTA 239
Query: 425 FYNIPTRRKAL--------KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN 476
N P+ +L + SEEY KI D+V RYAVH F+ KK E + T+
Sbjct: 240 LEN-PSIIFSLSIYMHMLTRSASEEYAKILDIVGRYAVHCSGTAFSCKKHGEAGVSLSTS 298
Query: 477 VNSSHSEVIGNIYGNNIS 494
+NSS + I ++G ++
Sbjct: 299 INSSILDRIRQLHGGAVA 316
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 100/119 (84%)
Query: 8 KKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGI 67
K LD V+N+IAAGE+I P +ALKEL+ENS+DA STS+++ V++GGLKLLQI DNG GI
Sbjct: 86 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGHGI 145
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+D+ I+CERFTTSKL FEDL+SI+T+GFRGEALASISHVAHLT+ TKT S CA+R
Sbjct: 146 DHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAWR 204
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 7/137 (5%)
Query: 183 IVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------ 236
I++R L ++ N EL+S+E + + + W+TN N+ KK T L+FIN+
Sbjct: 303 ILDRIRQLHGGAVAN-ELVSLEVDGKRWGCRASAWVTNANYHAKKTTLLIFINHRAVEST 361
Query: 237 PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSML 296
IKR +EQ YS +LPKG PFVYL L ++P+ +DVNVHPTK EV+FL+ED IIE + S +
Sbjct: 362 AIKRAVEQTYSTFLPKGGHPFVYLDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICSAI 421
Query: 297 EKTLLGSNTSRVFYTQS 313
L ++SR F TQ+
Sbjct: 422 RTKLAAVDSSRTFMTQT 438
>gi|358055207|dbj|GAA98976.1| hypothetical protein E5Q_05664 [Mixia osmundae IAM 14324]
Length = 707
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 131/212 (61%), Gaps = 28/212 (13%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+++V VK GGLK + I D+G GIR ED+ ++C+RF TSK++ F+DL+S+S++GFRGEA
Sbjct: 59 ATTVRVEVKDGGLKRIVIVDDGLGIRHEDLPLLCQRFATSKISTFDDLSSLSSYGFRGEA 118
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL---------KDPIKPCAGNQGTQIIAED 423
LASISHVAHLT++TKT+ ++A Y D L +P + A N GTQ I ED
Sbjct: 119 LASISHVAHLTVVTKTRHDLAGWKAKYADGILVPHSSSDTSSEPKRAAAVN-GTQFIIED 177
Query: 424 LFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS--- 480
LFYNIPTR +ALK S+EY +I DV+ +YA+ N V + +K D+ T + +S
Sbjct: 178 LFYNIPTRLRALKSASDEYARILDVLGKYAIQNASVSISCRKVGAREWDLNTGLPASVSI 237
Query: 481 ---------------HSEVIGNIYGNNISRRV 497
S+VIG IYG I + +
Sbjct: 238 LSDATSSQTQQDLSQQSDVIGGIYGQAIKKEL 269
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 105/119 (88%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+D+P I++L E+VVNRIAAGEV+QRPANA+KELLEN+LDA +T+++V VK GGLK + I
Sbjct: 17 LDEPRPIRQLSESVVNRIAAGEVVQRPANAVKELLENALDAGATTVRVEVKDGGLKRIVI 76
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
D+G GIR ED+ ++C+RF TSK++ F+DL+S+S++GFRGEALASISHVAHLT++TKT+
Sbjct: 77 VDDGLGIRHEDLPLLCQRFATSKISTFDDLSSLSSYGFRGEALASISHVAHLTVVTKTR 135
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ V +D L GW + +NFS KK +++F+NN I++ +E Y+ LPK
Sbjct: 268 ELVEVSLQEDTLALSAHGWFSGLNFSAKKAVYVIFVNNRLVESRSIRKSLEIFYAPLLPK 327
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
G FPFVY+SL +DP +DVNVHPTK EV F++ED I + + + LE L S SR F
Sbjct: 328 GGFPFVYISLMLDPATIDVNVHPTKSEVGFMNEDDISDALCTALEAKLEESRQSRGF 384
>gi|145353672|ref|XP_001421130.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581366|gb|ABO99423.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 722
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI VT ++GG KLL++QD+G G+R ED+ ++CER TSK+ +FEDL +FGFRGEA
Sbjct: 53 AKSIAVTTREGGNKLLRVQDDGHGVRIEDLPLLCERHATSKIEKFEDLARCESFGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL-KDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LAS+S+VAH++ T + A RA+Y D K+ + KP AG GT I E+LFYN+ TR
Sbjct: 113 LASMSYVAHVSATTMAAGATHATRATYTDGKMDAEGAKPIAGVLGTTISVENLFYNVVTR 172
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK SEEY+K+ +V+ RYA V FT +K E+ A + T V S E + IYG
Sbjct: 173 RKALKSASEEYSKVLEVLQRYAALRTDVAFTCRKHGESRATLHTPVAQSRVERLQAIYGP 232
Query: 492 NISRRVRRFSSASQ 505
++R +++ S+
Sbjct: 233 TVARDLKKLDFDSE 246
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I +L VVNR+AAGEVI RP+NALKEL+ENSLDA + SI VT ++GG KLL++QD+
Sbjct: 14 PRAIGRLPSDVVNRVAAGEVIHRPSNALKELVENSLDAGAKSIAVTTREGGNKLLRVQDD 73
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G G+R ED+ ++CER TSK+ +FEDL +FGFRGEALAS+S+VAH++ T +
Sbjct: 74 GHGVRIEDLPLLCERHATSKIEKFEDLARCESFGFRGEALASMSYVAHVSATTMAAGATH 133
Query: 124 AYRWCTY 130
A R TY
Sbjct: 134 ATR-ATY 139
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 85/138 (61%), Gaps = 12/138 (8%)
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
F+L+V G ++ N+ +KK TF+LFIN+ P+KR E VY+ LPK PFV++ L
Sbjct: 254 FKLQVDGLVSGGNYHSKKTTFILFINSRLVECAPLKRACESVYAAILPKAEKPFVFMHLR 313
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
+ ++VDVNVHPTK EVHFLH++ I+E +QS LEK LL +N+SR F Q T+ G
Sbjct: 314 LPFEDVDVNVHPTKQEVHFLHQEAIVELIQSKLEKILLATNSSRTFTVQ------TLLPG 367
Query: 324 GLKLLQIQDNGTGIRKED 341
KL + D R D
Sbjct: 368 AEKLAKKDDENDAERSGD 385
>gi|213404194|ref|XP_002172869.1| MutL family protein Mlh1 [Schizosaccharomyces japonicus yFS275]
gi|212000916|gb|EEB06576.1| MutL family protein Mlh1 [Schizosaccharomyces japonicus yFS275]
Length = 700
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 149/228 (65%), Gaps = 12/228 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER ++ +++ + S S +ST I V +K+GGLKLLQI DNGTGI +D+ ++C+
Sbjct: 26 IIERPENAVKELIENSLDS-----ESTIIDVLLKEGGLKLLQISDNGTGIYNDDLPLLCQ 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RF+TSK+T+FEDL+S+ TFGFRGEALASISH++ LT+ TK K + +RA YID KL
Sbjct: 81 RFSTSKITKFEDLSSVKTFGFRGEALASISHISRLTVTTKRKDAVHGWRAFYIDGKLAPA 140
Query: 408 I-------KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
+PCAG QGT + EDLFYN+P+R+ ALK +EE+ +I ++ +YA+HN V
Sbjct: 141 TGHGSSAPQPCAGKQGTVVSVEDLFYNVPSRKVALKNGAEEFRRILLLIQKYAIHNESVS 200
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSAL 508
F+ KK ++ A + + + I +YG+N+++ + F S L
Sbjct: 201 FSCKKFGDSAATLSLSSRFRRIDRIRQVYGSNLAKNLLPFEVYGGSLL 248
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L E VVN+IAAGE+I+RP NA+KEL+ENSLD++ST I V +K+GGLKLLQI DNGT
Sbjct: 9 RIRPLGEAVVNKIAAGEIIERPENAVKELIENSLDSESTIIDVLLKEGGLKLLQISDNGT 68
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ ++C+RF+TSK+T+FEDL+S+ TFGFRGEALASISH++ LT+ TK K + +
Sbjct: 69 GIYNDDLPLLCQRFSTSKITKFEDLSSVKTFGFRGEALASISHISRLTVTTKRKDA--VH 126
Query: 126 RWCTYLAD 133
W + D
Sbjct: 127 GWRAFYID 134
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Query: 216 GWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
G ++N N+++KK FLLFINN +++ +E+VYS +LPKG+ PF+YLSL + V
Sbjct: 255 GLVSNANYASKKTVFLLFINNRLVESTDLRKNLEEVYSEFLPKGASPFLYLSLNIPESQV 314
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
DVNVHP+K VHFLH+ I + ++S L K L + R ++ Q+
Sbjct: 315 DVNVHPSKRVVHFLHDQEIADLLRSHLSKVLENEDARRSYHVQT 358
>gi|342182968|emb|CCC92448.1| putative mismatch repair protein MLH1 [Trypanosoma congolense
IL3000]
Length = 883
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 122/182 (67%), Gaps = 5/182 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R + L++ L S ST IQV ++ GGL+LLQ+ D+G GI + D+ ++CE
Sbjct: 20 VVQRPSAALKELLENS-----LDAGSTFIQVVIQGGGLELLQVTDDGHGIHRSDLPLLCE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R+ TSKL FE+L + +FGFRGEAL+SIS+VA +T+ T + A+R Y+D +++
Sbjct: 75 RYATSKLCTFEELQHVRSFGFRGEALSSISYVARVTVTTMCRGDTLAWRCQYVDGQMQGE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGN GT I AE +FYN RR+AL + SEEY++ VVSRYA+ PHVGF+ ++ +
Sbjct: 135 PKPCAGNPGTCIRAEKMFYNSEVRRRALNRYSEEYSRAVGVVSRYAMAFPHVGFSCRRTD 194
Query: 468 EN 469
N
Sbjct: 195 GN 196
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++L E+VVNRIAAGEV+QRP+ ALKELLENSLDA ST IQV ++ GGL+LLQ+ D+G
Sbjct: 3 RIERLPESVVNRIAAGEVVQRPSAALKELLENSLDAGSTFIQVVIQGGGLELLQVTDDGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D+ ++CER+ TSKL FE+L + +FGFRGEAL+SIS+VA +T+ T + A+
Sbjct: 63 GIHRSDLPLLCERYATSKLCTFEELQHVRSFGFRGEALSSISYVARVTVTTMCRGDTLAW 122
Query: 126 RWCTYLADLM 135
R C Y+ M
Sbjct: 123 R-CQYVDGQM 131
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKG 253
+L G + +TG+ +++ +K+ +F+NN ++R ++ VY L G
Sbjct: 254 ILGASGPAGQGRFLITGYTSDMTLPNRKLFLCVFVNNRLVDSAAVRRALDAVYGGVLVGG 313
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ PF + + + VDVN+HPTKHEV L E+ +I R+ + L+ S R
Sbjct: 314 NRPFSVFFITVPVERVDVNIHPTKHEVCLLDEEVVISRLSECVRGALMASAARR------ 367
Query: 314 TSIQVTVKQGGLKLLQIQDNG 334
Q+ +Q K + + D G
Sbjct: 368 ---QIDTRQVLSKAVALSDAG 385
>gi|84784053|gb|ABC61990.1| MLH1-like protein 2 [Trichomonas vaginalis]
Length = 793
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 174/340 (51%), Gaps = 36/340 (10%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +P I KLD++V+++IAAGE+I P N +KELLENS+DA + IQ+ ++ GG L+QI
Sbjct: 19 MSEPGYIMKLDDSVIHKIAAGEIITEPVNVVKELLENSIDAVADHIQINIENGGYGLIQI 78
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+GTGIRK DM + C R TTSKL ++ DL +I TFGFRGEAL S+S AH+TI TKT
Sbjct: 79 KDDGTGIRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFSMSCCAHVTITTKTFQ 138
Query: 121 SPCAYRW----CTYLADLMALALMEMSQYLQRD----------KEQIGDKEEKQWYRTVE 166
Y +DL +A E + RD + K+ Y V
Sbjct: 139 EEYGYSAEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNARPKATTDAKKIYEVVA 198
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLE-----LLSVEGTDDAFQLK-------- 213
V + + S E +L+ + E L +E T F L
Sbjct: 199 KYAVTYPELSFVLSSNGKE---MLQTYGGSKTEDVLKLLFDIEDTKSIFTLSFSPYPNVT 255
Query: 214 VTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
T +++ +FS+KK +FIN + K I+ YS + G PF ++ L M +
Sbjct: 256 ATMFLSAPSFSSKKKMXAIFINGRLVQCQSFKHSIDTAYSETVGSGVSPFYFIILVMPQE 315
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
NV+VNVHP+K V F+ E I E + ++++L SR
Sbjct: 316 NVEVNVHPSKKTVKFIGEVEIGEEIHKKIKESLEQRRGSR 355
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L+QI+D+GTGIRK DM + C R TTSKL ++ DL +I TFGFRGEAL S
Sbjct: 64 IQINIENGGYGLIQIKDDGTGIRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFS 123
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
+S AH+TI TKT Y A Y D K+ +K A +GT + DLFYN R A
Sbjct: 124 MSCCAHVTITTKTFQEEYGYSAEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNAR 183
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ + + KI +VV++YAV P + F L
Sbjct: 184 PKATTDAKKIYEVVAKYAVTYPELSFVL 211
>gi|389583719|dbj|GAB66453.1| DNA mismatch repair enzyme [Plasmodium cynomolgi strain B]
Length = 886
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 115/164 (70%), Gaps = 2/164 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI V + +GGLK LQI DNG GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEA
Sbjct: 68 STSISVHLNKGGLKSLQIIDNGDGIHKDDLQIVCERFTTSKITNHKDIRSIKTFGFRGEA 127
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+SISHV++LTI TK + +P Y SY D K ++ C+G GT I +DLFYN+ +R
Sbjct: 128 LSSISHVSYLTITTKKRQAPFCYMCSYKDGKPTQEEPTVCSGKDGTIIRFDDLFYNMSSR 187
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
KAL ++EYNK +V+ +YA+H PHV FT KK N D+ T
Sbjct: 188 LKALNH-NDEYNKCLEVLQKYAIHYPHVAFTCKKWLSNTVDLST 230
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA STSI V + +GGLK LQI DNG
Sbjct: 31 RIIKLAEEDINRIAAGEVIIRPCNALKELIENSLDANSTSISVHLNKGGLKSLQIIDNGD 90
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEAL+SISHV++LTI TK + +P Y
Sbjct: 91 GIHKDDLQIVCERFTTSKITNHKDIRSIKTFGFRGEALSSISHVSYLTITTKKRQAPFCY 150
Query: 126 RWCTY 130
C+Y
Sbjct: 151 -MCSY 154
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+N + KK +++ FIN+ + KRM E Y+ +L KG++P+VYLS+ +
Sbjct: 352 FKCYGLISNPTYGGKKGSYIFFINDRLVESGILKRMCESQYANFLAKGNYPWVYLSIRLK 411
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VD+NVHPTK EVHFL+++ I + +E+ L + +R F
Sbjct: 412 YDIVDINVHPTKKEVHFLYQEEIAMLISKRIEQFLKNFHNARNF 455
>gi|443727027|gb|ELU13965.1| hypothetical protein CAPTEDRAFT_199117, partial [Capitella teleta]
Length = 205
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 93/112 (83%)
Query: 339 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRAS 398
KEDM IVCERFTTSKL FEDL I+T+GFRGEALASISHVAH+TI T+T S CAYR +
Sbjct: 92 KEDMSIVCERFTTSKLKTFEDLTQIATYGFRGEALASISHVAHVTITTRTNESKCAYRGA 151
Query: 399 YIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVS 450
+ D +LK P+KPCAGN GTQI+ EDLFYN+ TRRKAL+ P EE++K+ DVVS
Sbjct: 152 FSDGQLKAPLKPCAGNVGTQILVEDLFYNVATRRKALRSPGEEHSKVVDVVS 203
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 49/58 (84%)
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
KEDM IVCERFTTSKL FEDL I+T+GFRGEALASISHVAH+TI T+T S CAYR
Sbjct: 92 KEDMSIVCERFTTSKLKTFEDLTQIATYGFRGEALASISHVAHVTITTRTNESKCAYR 149
>gi|123464038|ref|XP_001317043.1| DNA mismatch repair protein [Trichomonas vaginalis G3]
gi|121899767|gb|EAY04820.1| DNA mismatch repair protein, putative [Trichomonas vaginalis G3]
Length = 775
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 174/340 (51%), Gaps = 36/340 (10%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +P I KLD++V+++IAAGE+I P N +KELLENS+DA + IQ+ ++ GG L+QI
Sbjct: 1 MSEPGYIMKLDDSVIHKIAAGEIITEPVNVVKELLENSIDAVADHIQINIENGGYGLIQI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+GTGIRK DM + C R TTSKL ++ DL +I TFGFRGEAL S+S AH+TI TKT
Sbjct: 61 KDDGTGIRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFSMSCCAHVTITTKTFQ 120
Query: 121 SPCAYRW----CTYLADLMALALMEMSQYLQRD----------KEQIGDKEEKQWYRTVE 166
Y +DL +A E + RD + K+ Y V
Sbjct: 121 EEYGYSAEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNARPKATTDAKKIYEVVA 180
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLE-----LLSVEGTDDAFQLK-------- 213
V + + S E +L+ + E L +E T F L
Sbjct: 181 KYAVTYPELSFVLSSNGKE---MLQTYGGSKTEDVLKLLFDIEDTKSIFTLSFSPYPNVT 237
Query: 214 VTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
T +++ +FS+KK +FIN + K I+ YS + G PF ++ L M +
Sbjct: 238 ATMFLSAPSFSSKKKMNAIFINGRLVQCQSFKHSIDTAYSETVGSGVSPFYFIILVMPQE 297
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
NV+VNVHP+K V F+ E I E + ++++L SR
Sbjct: 298 NVEVNVHPSKKTVKFIGEVEIGEEIHKKIKESLEQRRGSR 337
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L+QI+D+GTGIRK DM + C R TTSKL ++ DL +I TFGFRGEAL S
Sbjct: 46 IQINIENGGYGLIQIKDDGTGIRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFS 105
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
+S AH+TI TKT Y A Y D K+ +K A +GT + DLFYN R A
Sbjct: 106 MSCCAHVTITTKTFQEEYGYSAEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNAR 165
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ + + KI +VV++YAV P + F L
Sbjct: 166 PKATTDAKKIYEVVAKYAVTYPELSFVL 193
>gi|263191589|ref|NP_001161089.1| DNA mismatch repair protein Mlh1 isoform 2 [Homo sapiens]
Length = 658
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTYLADLMA-------------------LALME 141
EALASISHVAH+TI TKT CAYR L A +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 142 MSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--- 198
+ L+ E+ G E +V + + S + E + + L ++++N+
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISF--SVKKQGETVADVRTLPNASTVDNIRSI 121
Query: 199 -------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE V
Sbjct: 122 FGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETV 181
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+
Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNS 241
Query: 306 SRVFYTQS 313
SR+++TQ+
Sbjct: 242 SRMYFTQT 249
>gi|194391310|dbj|BAG60773.1| unnamed protein product [Homo sapiens]
Length = 658
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTYLADLMA-------------------LALME 141
EALASISHVAH+TI TKT CAYR L A +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 142 MSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--- 198
+ L+ E+ G E +V + + S + E + + L ++++N+
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISF--SVKKQGETVADVRTLPNASTVDNIRSI 121
Query: 199 -------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE V
Sbjct: 122 FGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETV 181
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+
Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNS 241
Query: 306 SRVFYTQS 313
SR+++TQ+
Sbjct: 242 SRMYFTQT 249
>gi|347289254|gb|AEO72330.1| modified MutL [synthetic construct]
Length = 852
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 124/188 (65%), Gaps = 14/188 (7%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
S+SI + + +GGLK LQI D+G GI KED+ IVCERFTTSK++ +D+ +I TFGFRG
Sbjct: 84 ANSSSISIHLNKGGLKSLQIIDDGDGIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRG 143
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIP 429
EALASISHV++LTI +K + SP Y +Y D K +D C+G GT I +DLFYN+P
Sbjct: 144 EALASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMP 203
Query: 430 TRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIY 489
R K + P++EYNK +V+ +YA+H P+V FT KK ++R VI +Y
Sbjct: 204 ARLKTM-NPNDEYNKCLEVLQKYAIHYPNVSFTCKK----WLNVRC--------VIQKVY 250
Query: 490 GNNISRRV 497
G NIS+ +
Sbjct: 251 GRNISKEL 258
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA S+SI + + +GGLK LQI D+G
Sbjct: 49 RIIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGD 108
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEALASISHV++LTI +K + SP Y
Sbjct: 109 GIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCY 168
Query: 126 RWCTY 130
C Y
Sbjct: 169 T-CNY 172
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 21/143 (14%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+N ++ KK ++ FIN N IK+ E YS +L KG++P++YLSL +
Sbjct: 272 FKCYGLISNPTYNGKKGCYIFFINDRLVESNIIKKSCENQYSNFLAKGNYPWIYLSLRLK 331
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGL 325
VD+NVHPTK EVHFL+++ I + +++ L + R F +T G
Sbjct: 332 YDIVDINVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTF-------NIT----GE 380
Query: 326 KLLQ----IQDNGTGIRKEDMDI 344
KLLQ I + I+KED ++
Sbjct: 381 KLLQTKLDINSSMLEIKKEDKEL 403
>gi|332816400|ref|XP_001170253.2| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Pan
troglodytes]
gi|397511604|ref|XP_003826160.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 3 [Pan
paniscus]
Length = 658
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTYLADLMA-------------------LALME 141
EALASISHVAH+TI TKT CAYR L A +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 142 MSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--- 198
+ L+ E+ G E ++ + + S + E + + L ++++N+
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISF--SVKKQGETVADVRTLPNASTVDNIRSI 121
Query: 199 -------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE V
Sbjct: 122 FGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETV 181
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+
Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNS 241
Query: 306 SRVFYTQS 313
SR+++TQ+
Sbjct: 242 SRMYFTQT 249
>gi|332215526|ref|XP_003256895.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Nomascus
leucogenys]
Length = 658
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTYLADLMA-------------------LALME 141
EALASISHVAH+TI TKT CAYR L A +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 142 MSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--- 198
+ L+ E+ G E ++ + + S + E + + L ++++N+
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISF--SVKKQGETVADVRTLPNASTVDNIRSI 121
Query: 199 -------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE V
Sbjct: 122 FGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETV 181
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+
Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNS 241
Query: 306 SRVFYTQS 313
SR+++TQ+
Sbjct: 242 SRMYFTQT 249
>gi|426339909|ref|XP_004033880.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 3 [Gorilla
gorilla gorilla]
Length = 658
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTYLADLMA-------------------LALME 141
EALASISHVAH+TI TKT CAYR L A +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 142 MSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--- 198
+ L+ E+ G E ++ + + S + E + + L ++++N+
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISF--SVKKQGETVADVRTLPNASTVDNIRSI 121
Query: 199 -------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQV 245
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE V
Sbjct: 122 FGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETV 181
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNT 305
Y+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+
Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNS 241
Query: 306 SRVFYTQS 313
SR+++TQ+
Sbjct: 242 SRMYFTQT 249
>gi|225561837|gb|EEH10117.1| DNA binding protein [Ajellomyces capsulatus G186AR]
Length = 764
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 118/173 (68%), Gaps = 9/173 (5%)
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 396
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 92
Query: 397 ASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADV 448
A Y D KL +P KP AG GTQI EDLFYN+PTRR+A + SEEY KI DV
Sbjct: 93 AHYSDGKLVPAKPGQTAEP-KPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 151
Query: 449 VSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
V RYAVH V F+ KK ++ I T+ NS+ + I I+G+ ++ + FS
Sbjct: 152 VGRYAVHCSGVAFSCKKHGDSGVSISTSTNSTTVDRIRQIHGSAVASELIDFS 204
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D + +GW +N N+ K+ T LLFIN+ ++R IEQ YS +LPK
Sbjct: 199 ELIDFSVDDPRLGFRASGWASNANYHAKRTTILLFINHRSVESSAVRRAIEQAYSNFLPK 258
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL L ++P+ VDVNVHPTK EV+FL+ED II + + +++ L ++SR F Q
Sbjct: 259 GGHPFAYLDLEIEPQRVDVNVHPTKREVNFLNEDEIIGSICTTIQQKLATVDSSRTFMVQ 318
Query: 313 S 313
+
Sbjct: 319 T 319
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 92
>gi|402860653|ref|XP_003894738.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 3 [Papio
anubis]
Length = 658
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI ++V RY++HN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEIVGRYSIHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 139/250 (55%), Gaps = 41/250 (16%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYRWCTY---------------------LADLMALAL 139
EALASISHVAH+TI TKT CAYR +Y + DL +
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYR-ASYSDGKLKGPPKPCAGNQGTQITVEDLF-YNI 61
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL- 198
+ L+ E+ G E ++ + + S + E + + L ++++N+
Sbjct: 62 ATRRKALKNPSEEYGKILEIVGRYSIHNAGISF--SVKKQGETVADVRTLPNASTVDNIR 119
Query: 199 ---------ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIE 243
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE
Sbjct: 120 SIFGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIE 179
Query: 244 QVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
VY+ YLPK + PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGS
Sbjct: 180 TVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGS 239
Query: 304 NTSRVFYTQS 313
N+SR+++TQ+
Sbjct: 240 NSSRMYFTQT 249
>gi|124803939|ref|XP_001347855.1| DNA mismatch repair protein MLH1, putative [Plasmodium falciparum
3D7]
gi|23496107|gb|AAN35768.1|AE014838_46 DNA mismatch repair protein MLH1, putative [Plasmodium falciparum
3D7]
gi|29650450|gb|AAO86766.1| DNA mismatch repair enzyme [Plasmodium falciparum]
Length = 1016
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 115/165 (69%), Gaps = 2/165 (1%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
S+SI + + +GGLK LQI D+G GI KED+ IVCERFTTSK++ +D+ +I TFGFRGE
Sbjct: 85 NSSSISIHLNKGGLKSLQIIDDGDGIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGE 144
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPT 430
ALASISHV++LTI +K + SP Y +Y D K +D C+G GT I +DLFYN+P
Sbjct: 145 ALASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPA 204
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
R K + P++EYNK +V+ +YA+H P+V FT KK N D+ T
Sbjct: 205 RLKTM-NPNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNT 248
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA S+SI + + +GGLK LQI D+G
Sbjct: 49 RIIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGD 108
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEALASISHV++LTI +K + SP Y
Sbjct: 109 GIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCY 168
Query: 126 RWCTY 130
C Y
Sbjct: 169 T-CNY 172
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 21/143 (14%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+N ++ KK ++ FIN N IK+ E YS +L KG++P++YLSL +
Sbjct: 436 FKCYGLISNPTYNGKKGCYIFFINDRLVESNIIKKSCENQYSNFLAKGNYPWIYLSLRLK 495
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGL 325
VD+NVHPTK EVHFL+++ I + +++ L + R F +T G
Sbjct: 496 YDIVDINVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTF-------NIT----GE 544
Query: 326 KLLQ----IQDNGTGIRKEDMDI 344
KLLQ I + I+KED ++
Sbjct: 545 KLLQTKLDINSSMLEIKKEDKEL 567
>gi|67616266|ref|XP_667471.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658612|gb|EAL37242.1| hypothetical protein Chro.50122, partial [Cryptosporidium hominis]
Length = 444
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 2/202 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S +I + +++GG++ LQI D+G+GI K D ++CERF TSKLT +D+ S+ TFGFRGEA
Sbjct: 40 SRNIVLQLRKGGIQSLQISDDGSGIDKNDFPMLCERFATSKLTSMKDIQSLKTFGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCA-GNQGTQIIAEDLFYNIPTR 431
L+SIS V+ L+I +KT+ S CAYRAS+ D K+ ++ A +GT + DLFYN+P+R
Sbjct: 100 LSSISFVSQLSITSKTEMSDCAYRASFSDGKMISELEEVALAKRGTIVQINDLFYNMPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN-SSHSEVIGNIYG 490
++A+ S+EY + D+V +Y + P V F ++K +N D+RTN + VIG +YG
Sbjct: 160 QRAMGSASDEYARCLDLVQKYCIEFPEVSFNVRKFGQNTNDLRTNGGVKTRKNVIGLLYG 219
Query: 491 NNISRRVRRFSSASQSALARKA 512
+N+ + + +F+ + S R +
Sbjct: 220 SNVVKELIQFTVSRDSERPRDS 241
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 97/121 (80%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KL + V++RIAAGEV+ P++ALKELLENSLDA S +I + +++GG++ LQI D+G+
Sbjct: 3 RIRKLSDEVISRIAAGEVVVSPSHALKELLENSLDAGSRNIVLQLRKGGIQSLQISDDGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D ++CERF TSKLT +D+ S+ TFGFRGEAL+SIS V+ L+I +KT+ S CAY
Sbjct: 63 GIDKNDFPMLCERFATSKLTSMKDIQSLKTFGFRGEALSSISFVSQLSITSKTEMSDCAY 122
Query: 126 R 126
R
Sbjct: 123 R 123
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 217 WITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+ + ++ K+ T ++FIN N IK+ IE Y Y + FV S+ + + +D
Sbjct: 261 YISGLGYNPKQNTLIIFINGRLVKNNAIKQAIETAYQ-YTKSNYWAFV--SVRIPSETID 317
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
N+HPTK+ V+ HE I + +Q + +L SN SR
Sbjct: 318 PNIHPTKNLVYISHEALISDAIQRKVMCSLQASNYSR 354
>gi|66358030|ref|XP_626193.1| MutL family ATpase [Cryptosporidium parvum Iowa II]
gi|46227026|gb|EAK87976.1| MutL family ATpase [Cryptosporidium parvum Iowa II]
Length = 817
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S +I + +++GG++ LQI D+G+GI K D ++CERF TSKLT +D+ S+ TFGFRGEA
Sbjct: 40 SRNIILQLRKGGIQSLQISDDGSGIDKNDFPMLCERFATSKLTTMKDIQSLKTFGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCA-GNQGTQIIAEDLFYNIPTR 431
L+SIS V+ L+I +KT+ S CAYRAS+ D K+ ++ A +GT + DLFYN+P+R
Sbjct: 100 LSSISFVSQLSITSKTEMSDCAYRASFSDGKMISELEEVASAKRGTIVQINDLFYNMPSR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN-SSHSEVIGNIYG 490
++A+ S+EY + D+V +Y + P V F ++K +N D+RTN + VIG +YG
Sbjct: 160 QRAMGSASDEYARCLDLVQKYCIEFPEVSFNVRKFGQNTNDLRTNGGVKTRKNVIGLLYG 219
Query: 491 NNISRRVRRFSSASQSALAR 510
+N+ + + +F+ + S R
Sbjct: 220 SNVVKELIQFTVSRDSERPR 239
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 97/121 (80%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KL + V++RIAAGEV+ P++ALKELLENSLDA S +I + +++GG++ LQI D+G+
Sbjct: 3 RIRKLSDEVISRIAAGEVVVSPSHALKELLENSLDAGSRNIILQLRKGGIQSLQISDDGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D ++CERF TSKLT +D+ S+ TFGFRGEAL+SIS V+ L+I +KT+ S CAY
Sbjct: 63 GIDKNDFPMLCERFATSKLTTMKDIQSLKTFGFRGEALSSISFVSQLSITSKTEMSDCAY 122
Query: 126 R 126
R
Sbjct: 123 R 123
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 217 WITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+I+ + ++ K+ T ++FIN N IK+ IE Y Y + FV S+ + + +D
Sbjct: 261 YISGLGYNPKQNTLIIFINGRLVKNNAIKQAIETAYQ-YTKSNYWAFV--SVRIPSETID 317
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
N+HPTK+ V+ HE I + +Q + +L SN SR
Sbjct: 318 PNIHPTKNLVYISHETLISDAIQRKVMCSLQASNYSR 354
>gi|71650793|ref|XP_814087.1| mismatch repair protein MLH1 [Trypanosoma cruzi strain CL Brener]
gi|70879030|gb|EAN92236.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi]
Length = 864
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 7/161 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST IQV V+ GGL LLQ+ D+G GI ++D+ ++CER+ TSKL FEDL+ I++FGFRGEA
Sbjct: 40 STFIQVLVRDGGLGLLQVTDDGHGIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEA 99
Query: 373 LASISHVAHLTIIT-------KTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLF 425
L+SIS+V+ +T+ T + + A+R Y+D ++ PCAGN GT I E +F
Sbjct: 100 LSSISYVSRVTVTTMRRVDKDEASSGTLAWRCQYLDGAMQGEPTPCAGNPGTSIRVEKMF 159
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
YN RR+AL +PSEEY++I ++SRYA+ PHVGF+ +++
Sbjct: 160 YNSAVRRRALNRPSEEYSRIVALISRYALAFPHVGFSCRRE 200
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 6/136 (4%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L + VVNRIAAGEV+QRP+ ALKELLEN+LDA ST IQV V+ GGL LLQ+ D+G
Sbjct: 3 RIKRLSDNVVNRIAAGEVVQRPSAALKELLENALDAGSTFIQVLVRDGGLGLLQVTDDGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT-----KTKT 120
GI ++D+ ++CER+ TSKL FEDL+ I++FGFRGEAL+SIS+V+ +T+ T K +
Sbjct: 63 GIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEALSSISYVSRVTVTTMRRVDKDEA 122
Query: 121 SPCAYRW-CTYLADLM 135
S W C YL M
Sbjct: 123 SSGTLAWRCQYLDGAM 138
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPF 257
E +D F +TG+ + + + +F+NN IKR I+ VYS L G+ PF
Sbjct: 257 EAGEDCFL--ITGYTSGMALLNRNPYLCIFVNNRLVESAVIKRAIDTVYSGILTGGNRPF 314
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
L + + P VDVN+HPTKHEV L E+ I+ ++ + ++ S R T+
Sbjct: 315 TVLFITIPPDRVDVNIHPTKHEVCLLDEEIIVAQLSESVRLAVMESAARRQLDTR 369
>gi|71651658|ref|XP_814502.1| mismatch repair protein MLH1 [Trypanosoma cruzi strain CL Brener]
gi|70879480|gb|EAN92651.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi]
Length = 858
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 7/161 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST IQV V+ GGL LLQ+ D+G GI ++D+ ++CER+ TSKL FEDL+ I++FGFRGEA
Sbjct: 40 STFIQVLVRDGGLGLLQVTDDGHGIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEA 99
Query: 373 LASISHVAHLTIIT-------KTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLF 425
L+SIS+V+ +T+ T + + A+R Y+D ++ PCAGN GT I E +F
Sbjct: 100 LSSISYVSRVTVTTMRRVDKDEASSGTLAWRCQYLDGAMQGEPTPCAGNPGTSIRVEKMF 159
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
YN RR+AL +PSEEY++I ++SRYA+ PHVGF+ +++
Sbjct: 160 YNSAVRRRALNRPSEEYSRIVALISRYALAFPHVGFSCRRE 200
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 6/136 (4%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L + VVNRIAAGEV+QRP+ ALKELLEN+LDA ST IQV V+ GGL LLQ+ D+G
Sbjct: 3 RIKRLSDNVVNRIAAGEVVQRPSAALKELLENALDAGSTFIQVLVRDGGLGLLQVTDDGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT-----KTKT 120
GI ++D+ ++CER+ TSKL FEDL+ I++FGFRGEAL+SIS+V+ +T+ T K +
Sbjct: 63 GIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEALSSISYVSRVTVTTMRRVDKDEA 122
Query: 121 SPCAYRW-CTYLADLM 135
S W C YL M
Sbjct: 123 SSGTLAWRCQYLDGAM 138
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPF 257
E +D F +TG+ + + + +F+NN IKR I+ VYS L G+ PF
Sbjct: 257 EAGEDCFL--ITGYTSGMALLNRNPYLCIFVNNRLVESAVIKRAIDTVYSGILTGGNRPF 314
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
L + + P VDVN+HPTKHEV L E+ I+ ++ + ++ S R T+
Sbjct: 315 TVLFITIPPDRVDVNIHPTKHEVCLLDEEIIVAQLSESVRLAVMESAARRQLDTR 369
>gi|403351590|gb|EJY75290.1| DNA mismatch repair protein MlH1, putative [Oxytricha trifallax]
Length = 680
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 41/347 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q P I+KLDE +N+IAAGEV+ P+ ALKE++ENS+DA ++ I V ++ G +QIQD
Sbjct: 10 QVPSIRKLDEATINKIAAGEVVVSPSAALKEMIENSIDAGASRIDVLCQKSGFDFMQIQD 69
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI+ D ++CERF TSK+ +F DL + +FGFRGEALASIS+V+ LT+ +K + S
Sbjct: 70 NGHGIKVLDFPLLCERFATSKIEKFSDLKKVGSFGFRGEALASISYVSKLTVTSKVQDSE 129
Query: 123 CAYRWCTYLADLM---------ALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLM 173
AY+ ++ +M A + + + +D + +K E++ + +
Sbjct: 130 LAYQ-ADFVNGIMLNEDGNGPKPCAGQQGTTIVVKDLFANNPQRKKSMGVNEEYSKIVDV 188
Query: 174 KSQYQPSEKIVERACL-------------LEIASLNNLELLSVEGTDDAFQLKVTGWITN 220
++Y +++ +C ++ +N+LE E + ++ +
Sbjct: 189 VTKYSVHYPMIKFSCRKMDDKKTDLSTHNIQRHPINDLEPADQEKQKNVLRIDIIKKTFG 248
Query: 221 VNFSTKKMT--------FLLFINNPIKRMIE---------QVYSIYLPKGSFP-FVYLSL 262
N + K F I+ + R++E QVY + PKG + FVY+SL
Sbjct: 249 QNQAGKDFIEVVDQLDLFQYSISTIMNRLVESDKIKRTLDQVYQQFQPKGGYSYFVYMSL 308
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
+ + +DVNVHPTK +V F ++ +E +Q +L + + G+ + F
Sbjct: 309 FIPSEQIDVNVHPTKKQVIFERQEEFVEYIQDLLIEKIAGTTGEKSF 355
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ I V ++ G +QIQDNG GI+ D ++CERF TSK+ +F DL + +FGFRGEA
Sbjct: 50 ASRIDVLCQKSGFDFMQIQDNGHGIKVLDFPLLCERFATSKIEKFSDLKKVGSFGFRGEA 109
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL----KDPIKPCAGNQGTQIIAEDLFYNI 428
LASIS+V+ LT+ +K + S AY+A +++ + + KPCAG QGT I+ +DLF N
Sbjct: 110 LASISYVSKLTVTSKVQDSELAYQADFVNGIMLNEDGNGPKPCAGQQGTTIVVKDLFANN 169
Query: 429 PTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSH 481
P R+K++ +EEY+KI DVV++Y+VH P + F+ +K ++ D+ T+ H
Sbjct: 170 PQRKKSMG-VNEEYSKIVDVVTKYSVHYPMIKFSCRKMDDKKTDLSTHNIQRH 221
>gi|19112991|ref|NP_596199.1| MutL family protein Mlh1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474996|sp|Q9P7W6.1|MLH1_SCHPO RecName: Full=Putative MutL protein homolog 1; AltName: Full=DNA
mismatch repair protein MLH1
gi|6723918|emb|CAB66448.1| MutL family protein Mlh1 (predicted) [Schizosaccharomyces pombe]
Length = 684
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 14/222 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER ++ +++ + S STSI V +K GGLKLLQI DNG+GI+ +D+ +C+
Sbjct: 25 IIERPENAIKELIENS-----LDAGSTSIDVLLKDGGLKLLQITDNGSGIQYDDLPYLCQ 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RF+TSK+ F DL + TFGFRGEALASISHVA +T++TK + A++A Y+D L P
Sbjct: 80 RFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAWKAFYVDGALA-P 138
Query: 408 I--------KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
I +PCAG QGT I AEDLFYN+ +R+ ALK SEE+ +I +V +YA+HN V
Sbjct: 139 ISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEEFRRIMILVQKYAIHNDQV 198
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
F KK + +A + + S ++ I +IYG ++ +R FS
Sbjct: 199 SFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFS 240
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 99/128 (77%), Gaps = 2/128 (1%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ V+N+IAAGE+I+RP NA+KEL+ENSLDA STSI V +K GGLKLLQI DNG+
Sbjct: 8 KIRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLLQITDNGS 67
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+ +D+ +C+RF+TSK+ F DL + TFGFRGEALASISHVA +T++TK + +
Sbjct: 68 GIQYDDLPYLCQRFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSD--IH 125
Query: 126 RWCTYLAD 133
W + D
Sbjct: 126 AWKAFYVD 133
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPF 257
EG G+I+N +F KK +LFINN ++ +E+ Y+ YL KG+ F
Sbjct: 243 EGQSSIVGFSANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHKGASYF 302
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VYLSL M P+ +DVNVHP+K VHFL++ I + L + L ++T R + Q+
Sbjct: 303 VYLSLNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQA 358
>gi|403339826|gb|EJY69173.1| DNA mismatch repair protein MlH1, putative [Oxytricha trifallax]
Length = 721
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 41/347 (11%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q P I+KLDE +N+IAAGEV+ P+ ALKE++ENS+DA ++ I V ++ G +QIQD
Sbjct: 10 QVPSIRKLDEATINKIAAGEVVVSPSAALKEMIENSIDAGASRIDVLCQKSGFDFMQIQD 69
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI+ D ++CERF TSK+ +F DL + +FGFRGEALASIS+V+ LT+ +K + S
Sbjct: 70 NGHGIKVLDFPLLCERFATSKIEKFSDLKKVGSFGFRGEALASISYVSKLTVTSKVQDSE 129
Query: 123 CAYRWCTYLADLM---------ALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLM 173
AY+ ++ +M A + + + +D + +K E++ + +
Sbjct: 130 LAYQ-ADFVNGIMLNEDGNGPKPCAGQQGTTIVVKDLFANNPQRKKSMGVNEEYSKIVDV 188
Query: 174 KSQYQPSEKIVERACL-------------LEIASLNNLELLSVEGTDDAFQLKVTGWITN 220
++Y +++ +C ++ +N+LE E + ++ +
Sbjct: 189 VTKYSVHYPMIKFSCRKMDDKKTDLSTHNIQRHPINDLEPADQEKQKNVLRIDIIKKTFG 248
Query: 221 VNFSTKKMT--------FLLFINNPIKRMIE---------QVYSIYLPKGSFP-FVYLSL 262
N + K F I+ + R++E QVY + PKG + FVY+SL
Sbjct: 249 QNQAGKDFIEVVDQLDLFQYSISTIMNRLVESDKIKRTLDQVYQQFQPKGGYSYFVYMSL 308
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
+ + +DVNVHPTK +V F ++ +E +Q +L + + G+ + F
Sbjct: 309 FIPSEQIDVNVHPTKKQVIFERQEEFVEYIQDLLIEKIAGTTGEKSF 355
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ I V ++ G +QIQDNG GI+ D ++CERF TSK+ +F DL + +FGFRGEA
Sbjct: 50 ASRIDVLCQKSGFDFMQIQDNGHGIKVLDFPLLCERFATSKIEKFSDLKKVGSFGFRGEA 109
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL----KDPIKPCAGNQGTQIIAEDLFYNI 428
LASIS+V+ LT+ +K + S AY+A +++ + + KPCAG QGT I+ +DLF N
Sbjct: 110 LASISYVSKLTVTSKVQDSELAYQADFVNGIMLNEDGNGPKPCAGQQGTTIVVKDLFANN 169
Query: 429 PTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN 476
P R+K++ +EEY+KI DVV++Y+VH P + F+ +K ++ D+ T+
Sbjct: 170 PQRKKSMG-VNEEYSKIVDVVTKYSVHYPMIKFSCRKMDDKKTDLSTH 216
>gi|240275443|gb|EER38957.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 187
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 98/119 (82%)
Query: 8 KKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGI 67
K LD V+N+IAAGE+I P +ALKEL+ENS+DA +TS+++ VK GGLKLLQI DNG GI
Sbjct: 35 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGHGI 94
Query: 68 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA+R
Sbjct: 95 DCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 153
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 85/115 (73%), Gaps = 9/115 (7%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TS+++ VK GGLKLLQI DNG GI +D+ I+CERFTTSKL FEDL+SI T+GFRGEA
Sbjct: 70 ATSVEILVKDGGLKLLQITDNGHGIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEA 129
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQI 419
LASISH+AHLT+ TKT S CA+RA Y D KL +P KP AG GTQI
Sbjct: 130 LASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPAKPGQTAEP-KPTAGRGGTQI 183
>gi|82594959|ref|XP_725646.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480728|gb|EAA17211.1| hMLH1 gene product-related [Plasmodium yoelii yoelii]
Length = 885
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 115/165 (69%), Gaps = 4/165 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I V + +GGLK +QI D+G GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEA
Sbjct: 54 STNISVQLNKGGLKSVQIIDDGDGIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEA 113
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK--LKDPIKPCAGNQGTQIIAEDLFYNIPT 430
LASISHV++LTI TK + S Y SY D K K+P C+G GT I +DLFYN+ T
Sbjct: 114 LASISHVSYLTITTKKRKSSSCYTCSYKDGKPTQKEPT-ACSGKDGTIIRFDDLFYNMKT 172
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
R K L ++EYNK DV+ +Y++H PHV FT KK N+ D+ T
Sbjct: 173 RLKTLNH-NDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLST 216
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL + +NRIAAGEVI RP NALKEL+ENSLDA ST+I V + +GGLK +QI D+G
Sbjct: 17 RIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 76
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEALASISHV++LTI TK + S Y
Sbjct: 77 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCY 136
Query: 126 RWCTY 130
C+Y
Sbjct: 137 T-CSY 140
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+ ++++KK +++ FIN N +KR E Y+ +L KG++P+VYL+L +
Sbjct: 333 FKCYGLISGPSYNSKKSSYIFFINDRLVESNILKRACENQYNNFLGKGNYPWVYLALRLK 392
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VD+NVHPTK EVHFL++D I + +E+ L N R +
Sbjct: 393 YDIVDINVHPTKKEVHFLYQDEIATLISKKIEQVLKNINNMRSY 436
>gi|68068487|ref|XP_676154.1| DNA mismatch repair protein MLH1 [Plasmodium berghei strain ANKA]
gi|56495716|emb|CAH97070.1| DNA mismatch repair protein MLH1, putative [Plasmodium berghei]
Length = 496
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 115/166 (69%), Gaps = 4/166 (2%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
ST+I V + +GGLK +QI D+G GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGE
Sbjct: 50 NSTNISVQLNKGGLKSVQIIDDGDGIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGE 109
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSK--LKDPIKPCAGNQGTQIIAEDLFYNIP 429
ALASISHV++LTI TK + S Y +Y D K K+P C+G GT I +DLFYN+
Sbjct: 110 ALASISHVSYLTITTKKRKSSSCYTCTYKDGKPTQKEPT-ACSGKDGTIIRFDDLFYNMK 168
Query: 430 TRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
TR K L ++EYNK DV+ +Y++H PHV FT KK N+ D+ T
Sbjct: 169 TRLKTLNH-NDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLST 213
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL + +NRIAAGEVI RP NALKEL+ENSLDA ST+I V + +GGLK +QI D+G
Sbjct: 14 RIIKLSKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 73
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEALASISHV++LTI TK + S Y
Sbjct: 74 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCY 133
Query: 126 RWCTY 130
CTY
Sbjct: 134 T-CTY 137
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+ ++++KK +++ FIN N +KR E Y+ +L KG++P+VYL+L +
Sbjct: 316 FKCYGLISGPSYNSKKSSYIFFINDRLVESNILKRACENQYNNFLGKGNYPWVYLALRLK 375
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VD+NVHPTK EVHFL++D I + +E+ L N R +
Sbjct: 376 YDIVDINVHPTKKEVHFLYQDEIATLISKKIEEILKKINNMRSY 419
>gi|70950802|ref|XP_744693.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524752|emb|CAH80116.1| hypothetical protein PC000722.03.0 [Plasmodium chabaudi chabaudi]
Length = 344
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 115/166 (69%), Gaps = 4/166 (2%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
ST+I V + +GGLK +QI D+G GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGE
Sbjct: 53 NSTNISVQLNKGGLKSVQIIDDGDGIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGE 112
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSK--LKDPIKPCAGNQGTQIIAEDLFYNIP 429
ALASISHV++LTI TK + S Y SY D K K+P C+G GT I +DLFYN+
Sbjct: 113 ALASISHVSYLTITTKKRKSLSCYTCSYKDGKPTQKEPT-ACSGKDGTIIRFDDLFYNMK 171
Query: 430 TRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
TR K L ++EYNK DV+ +Y++H PHV FT KK N+ D+ T
Sbjct: 172 TRLKTLNH-NDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLST 216
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL + +NRIAAGEVI RP NALKEL+ENSLDA ST+I V + +GGLK +QI D+G
Sbjct: 17 RIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 76
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEALASISHV++LTI TK + S Y
Sbjct: 77 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSLSCY 136
Query: 126 RWCTY 130
C+Y
Sbjct: 137 T-CSY 140
>gi|209875525|ref|XP_002139205.1| DNA mismatch repair protein MutL [Cryptosporidium muris RN66]
gi|209554811|gb|EEA04856.1| DNA mismatch repair protein MutL, putative [Cryptosporidium muris
RN66]
Length = 811
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 3/186 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI + +K GGLK LQI DNG GI K D ++CERFTTSKL D++S+ TFGFRGEA
Sbjct: 40 SSSISLQLKHGGLKGLQIIDNGYGIDKADFPLLCERFTTSKLRLLSDIDSLKTFGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQ-GTQIIAEDLFYNIPTR 431
LASIS+V+ L+I + T +S CA+ AS+ID K+ I P A NQ GT I DLFYN+P R
Sbjct: 100 LASISYVSRLSITSMTDSSSCAFTASFIDGKIISDITPVAANQRGTIIKFSDLFYNMPAR 159
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT--NVNSSHSEVIGNIY 489
++L SEEY+ ++V +Y + VGF+++K D+RT N +VI +Y
Sbjct: 160 LRSLGSSSEEYSMCLELVQKYCIEFYKVGFSVRKFGNTCLDLRTPGGDNIQREDVIQLLY 219
Query: 490 GNNISR 495
G +S+
Sbjct: 220 GRELSK 225
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 95/120 (79%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L + V+ RIAAGEV+ RP++A+KEL+ENSLDA S+SI + +K GGLK LQI DNG
Sbjct: 3 RIKRLPDEVIARIAAGEVVVRPSHAVKELIENSLDAGSSSISLQLKHGGLKGLQIIDNGY 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D ++CERFTTSKL D++S+ TFGFRGEALASIS+V+ L+I + T +S CA+
Sbjct: 63 GIDKADFPLLCERFTTSKLRLLSDIDSLKTFGFRGEALASISYVSRLSITSMTDSSSCAF 122
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
Query: 217 WITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+++N+N+ KK T ++FIN + IK+ I+ Y G+ +V++S+ + P+ +D
Sbjct: 262 YMSNLNYRPKKSTVIIFINQRLVSSSSIKQAIDMAYQY---TGTQYWVFISIKVPPETID 318
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
NVHPTK +V H+ I E +Q+ + K L +++SR
Sbjct: 319 PNVHPTKSKVQLTHDVLIAEIIQNRMIKALQDTSSSR 355
>gi|221056082|ref|XP_002259179.1| dna mismatch repair protein mlh1 [Plasmodium knowlesi strain H]
gi|193809250|emb|CAQ39952.1| dna mismatch repair protein mlh1, putative [Plasmodium knowlesi
strain H]
Length = 865
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S +I V + +GGLK LQI D+G GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEA
Sbjct: 51 SRNISVHLNKGGLKSLQIIDDGDGIHKDDLKIVCERFTTSKITNHKDIRSIKTFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+SISHV++LTI TK + +P Y SY D K ++ C+G GT I +DLFYN+ +R
Sbjct: 111 LSSISHVSYLTITTKKRGAPFCYTCSYKDGKPTQEEPTICSGKDGTIIRFDDLFYNMNSR 170
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT 475
+AL ++EYNK +V+ +YA+H PHV FT KK N D+ T
Sbjct: 171 LRALNH-NDEYNKCLEVLQKYAIHYPHVAFTCKKWLSNTVDLST 213
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA S +I V + +GGLK LQI D+G
Sbjct: 14 RIIKLAEEDINRIAAGEVIIRPCNALKELIENSLDANSRNISVHLNKGGLKSLQIIDDGD 73
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEAL+SISHV++LTI TK + +P Y
Sbjct: 74 GIHKDDLKIVCERFTTSKITNHKDIRSIKTFGFRGEALSSISHVSYLTITTKKRGAPFCY 133
Query: 126 RWCTY 130
C+Y
Sbjct: 134 T-CSY 137
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+N + KK +++ FIN+ + KRM E Y+ +L KG++P+VYLS+ +
Sbjct: 330 FKCYGLISNPTYGGKKASYIFFINDRLVESGILKRMCENQYANFLAKGNYPWVYLSIRLK 389
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VD+NVHPTK EVHFL+++ I + +E+ L + +R F
Sbjct: 390 YDIVDINVHPTKKEVHFLYQEEIAMLISKRIEEFLKNFHNARSF 433
>gi|226294058|gb|EEH49478.1| DNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 758
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 9/172 (5%)
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 396
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA++
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWK 92
Query: 397 ASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADV 448
A Y D KL +P KP AG GTQI EDLFYNIPTRR+A + SEEY KI DV
Sbjct: 93 AHYSDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDLFYNIPTRRRAFRSSSEEYAKILDV 151
Query: 449 VSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRF 500
V RYAVH V + KK ++ I T+ NS+ + I I+G+ ++ + F
Sbjct: 152 VCRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTVDRIRQIHGSAVASELVTF 203
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 148/294 (50%), Gaps = 54/294 (18%)
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT A
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVT--TKT---AGS 87
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTL--VPLMKSQYQPSE--- 181
C + A L+ + + + Q TVE +P + ++ S
Sbjct: 88 SCAWKAHYSDGKLVPAKPGQSAEPKPTAGRGGTQI--TVEDLFYNIPTRRRAFRSSSEEY 145
Query: 182 -KIVERACLLEI-----------------------------------ASLNNLELLSVEG 205
KI++ C + S EL++
Sbjct: 146 AKILDVVCRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTVDRIRQIHGSAVASELVTFNV 205
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVY 259
D + +GW++N N+ K+ T LLFIN+ ++R IEQ YS +LPKG PF Y
Sbjct: 206 EDPGLGFRASGWVSNANYHAKRTTILLFINHRSVESSAVRRAIEQTYSNFLPKGGHPFTY 265
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
L L ++P+ VDVNVHPTK EV+FL+ED I + + +++ L ++SR F Q+
Sbjct: 266 LDLEIEPQRVDVNVHPTKREVNFLNEDEIFSSICTAIQQQLATVDSSRTFMVQT 319
>gi|156098528|ref|XP_001615296.1| DNA mismatch repair enzyme [Plasmodium vivax Sal-1]
gi|148804170|gb|EDL45569.1| DNA mismatch repair enzyme, putative [Plasmodium vivax]
Length = 867
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 118/178 (66%), Gaps = 2/178 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++SI V + +GGLK LQI D+G GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEA
Sbjct: 59 ASSISVHLNKGGLKALQIIDDGDGIHKDDLQIVCERFTTSKITTHKDIRSIKTFGFRGEA 118
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+SISHV++LTI TK + +P Y SY D K ++ C+G GT I +DLFYN+ +R
Sbjct: 119 LSSISHVSYLTITTKKREAPFCYTCSYKDGKPTQEEPTICSGKDGTIIRFDDLFYNMNSR 178
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIY 489
+ L ++EYNK +V+ +YA+H PHV FT KK N D+ T +G IY
Sbjct: 179 LRTLNH-NDEYNKCLEVLQKYAIHYPHVAFTCKKWLSNTVDLSTQGVGKGIGGLGGIY 235
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA ++SI V + +GGLK LQI D+G
Sbjct: 22 RIIKLAEEDINRIAAGEVIIRPCNALKELIENSLDANASSISVHLNKGGLKALQIIDDGD 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK+T +D+ SI TFGFRGEAL+SISHV++LTI TK + +P Y
Sbjct: 82 GIHKDDLQIVCERFTTSKITTHKDIRSIKTFGFRGEALSSISHVSYLTITTKKREAPFCY 141
Query: 126 RWCTY 130
C+Y
Sbjct: 142 T-CSY 145
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K G I+N + K+ +++ FIN+ + KRM E Y+ +L KG++P+VYLS+ +
Sbjct: 333 FKCYGLISNPTYGGKRGSYIFFINDRLVKSGILKRMCESQYANFLAKGNYPWVYLSIRLK 392
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS-IQVTVKQGG 324
VDVNVHPTK EVHFL+++ I + +E L + +R F + + +Q T
Sbjct: 393 YDIVDVNVHPTKKEVHFLYQEEIALLISKRIEDFLKNFHNARSFGAPTVNMVQTTFDVSS 452
Query: 325 LKL 327
+K+
Sbjct: 453 MKV 455
>gi|295670317|ref|XP_002795706.1| DNA mismatch repair protein Mlh1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284791|gb|EEH40357.1| DNA mismatch repair protein Mlh1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 763
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 116/173 (67%), Gaps = 9/173 (5%)
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 396
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA++
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWK 92
Query: 397 ASYIDSKL--------KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADV 448
A Y D KL +P KP AG GTQI EDLFYNIPTRR+A + SEEY KI DV
Sbjct: 93 AHYNDGKLVPAKPGQSAEP-KPTAGRGGTQITVEDLFYNIPTRRRAFRSSSEEYAKILDV 151
Query: 449 VSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
V RYAVH V + KK + I T+ NS+ + I I+G+ ++ + F+
Sbjct: 152 VGRYAVHCSGVAVSCKKHGDAGVSISTSTNSTTVDRIRQIHGSAVASELVNFN 204
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL++ D + +GW++N N+ K+ T LLFIN+ ++R IEQ YS +LPK
Sbjct: 199 ELVNFNVEDPGLGFRASGWVSNANYHVKRTTILLFINHRSVESSTVRRAIEQTYSNFLPK 258
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PF YL L ++P+ VDVNVHPTK EV+FL+ED II + + +++ L ++SR F Q
Sbjct: 259 GGHPFTYLDLEIEPQRVDVNVHPTKREVNFLNEDEIISSICTAIQQQLATVDSSRTFMVQ 318
Query: 313 S 313
+
Sbjct: 319 T 319
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 51/60 (85%)
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+ +D+ I+CERFTTSKL FEDL+SI T+GFRGEALASISH+AHLT+ TKT S CA++
Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWK 92
>gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
gi|254766169|sp|B8CX97.1|MUTL_HALOH RecName: Full=DNA mismatch repair protein MutL
gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
Length = 644
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 173/323 (53%), Gaps = 37/323 (11%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+IK+L E+V N+I+AGEV++RPA+ +KEL+ENSLDA S I + ++ GG L++++DNG
Sbjct: 2 PEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT---- 120
GI ++++I +R+ TSK+T DL S+ + GFRGEALASI+ V+ L II++TK+
Sbjct: 62 HGIPSDEIEIAFDRYATSKITDINDLYSLKSLGFRGEALASIASVSILDIISRTKSQTKA 121
Query: 121 -------------SPCAYRWCTYLADLMALALM----EMSQYLQRDKEQIGD-----KEE 158
PC T D++ L +YL+ + + E
Sbjct: 122 IKMRLKGGKVISKEPCGASVGT---DIIVKDLFFNTPARYKYLKTTRNEFKHISNIITRE 178
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
Y V TL+ + + C+ I + L +D + +KV+G+I
Sbjct: 179 ALAYPGVNFTLIHNGRIVLKTPGTGKTLDCIYAIYGKEMAQSLVKIDYEDRY-IKVSGYI 237
Query: 219 TNVNFSTKKMTFLLFI-------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ ++ ++ +F N+ + R +E+ Y LP G++P V+L+L ++P VDV
Sbjct: 238 SRPDYYRYNRSYEIFFVNKRAVHNSILNRGVEEAYQGLLPPGAYPVVFLNLKLNPILVDV 297
Query: 272 NVHPTKHEVHFLHEDTIIERVQS 294
NVHPTK EV F + I E +Q+
Sbjct: 298 NVHPTKKEVKFSRDKVIKEVIQN 320
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S I + ++ GG L++++DNG GI ++++I +
Sbjct: 20 VVERPASVVKELVENS-----LDAGSNKILIEIENGGKDLIRVKDNGHGIPSDEIEIAFD 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R+ TSK+T DL S+ + GFRGEALASI+ V+ L II++TK+ A + K+
Sbjct: 75 RYATSKITDINDLYSLKSLGFRGEALASIASVSILDIISRTKSQTKAIKMRLKGGKVISK 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+PC + GT II +DLF+N P R K LK E+ I+++++R A+ P V FTL
Sbjct: 135 -EPCGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKHISNIITREALAYPGVNFTL 189
>gi|319896480|ref|YP_004134673.1| DNA mismatch repair protein MutL, partial [Haemophilus influenzae
F3031]
gi|317431982|emb|CBY80330.1| DNA mismatch repair protein MutL, partial [Haemophilus influenzae
F3031]
Length = 445
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 176/331 (53%), Gaps = 45/331 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEELTQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP +P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAKYLPTDVYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHF----LHEDTIIERVQSML 296
DVNVHPTKHEV F L D I E V L
Sbjct: 299 DVNVHPTKHEVRFHQQRLIHDFIYEGVSHAL 329
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + IQ+ ++ GG L++I+DNG GI KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGANKIQIDIENGGANLIRIRDNGCGIPKEELSLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++ ++
Sbjct: 74 RHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
IKP + GT + +LF+N P RRK L+ E++ I +V+ R A+ + FTL
Sbjct: 134 IKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTKFNTAFTL 189
>gi|378696137|ref|YP_005178095.1| methyl-directed mismatch repair protein [Haemophilus influenzae
10810]
gi|301168660|emb|CBW28251.1| methyl-directed mismatch repair protein [Haemophilus influenzae
10810]
Length = 637
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L +E D L ++G
Sbjct: 183 FNTAFTLTHNGKIVRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIEWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP +P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+T +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|147794209|emb|CAN77833.1| hypothetical protein VITISV_024732 [Vitis vinifera]
Length = 494
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 147/259 (56%), Gaps = 56/259 (21%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
Q P +LD++VVN IAAGEVIQRP +A+KEL+ENSL+ STSI V VK GGLKL+Q+ D
Sbjct: 269 QKPFGHRLDQSVVNCIAAGEVIQRPVSAVKELVENSLNTYSTSINVIVKDGGLKLIQVSD 328
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+C+R TTSKL++FEDL SI GFRGEALAS+++V H+T+ T S
Sbjct: 329 DGHGIRYEDLPILCKRHTTSKLSEFEDLQSIKLMGFRGEALASMTYVGHVTVTIITAES- 387
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEK 182
ME+ + + + + H L LMK +
Sbjct: 388 -----------------MELPERM---------------FIQLPH-LRDLMKLR------ 408
Query: 183 IVERACLLEIASLNNLELLSVEGTDDAFQ---LKVTGWITNVNFSTKKMTFLLFINN--- 236
C+ ++ +N L+ +E DD ++ G+I+N N+ KK T +LFIN+
Sbjct: 409 -----CVFGVSVAHN--LMKIEAADDDVSSSVFEMNGFISNSNYIAKKTTMVLFINDRLV 461
Query: 237 ---PIKRMIEQVYSIYLPK 252
+KR IE VY+ LP+
Sbjct: 462 KCTALKRAIEIVYAATLPQ 480
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 62/81 (76%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
T STSI V VK GGLKL+Q+ D+G GIR ED+ I+C+R TTSKL++FEDL SI GFRG
Sbjct: 307 TYSTSINVIVKDGGLKLIQVSDDGHGIRYEDLPILCKRHTTSKLSEFEDLQSIKLMGFRG 366
Query: 371 EALASISHVAHLTIITKTKTS 391
EALAS+++V H+T+ T S
Sbjct: 367 EALASMTYVGHVTVTIITAES 387
>gi|145629068|ref|ZP_01784867.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
gi|145639644|ref|ZP_01795247.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|144978571|gb|EDJ88294.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
gi|145271201|gb|EDK11115.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|309750614|gb|ADO80598.1| DNA mismatch repair protein MutL [Haemophilus influenzae R2866]
Length = 629
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 175/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEELSQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+T +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|145630634|ref|ZP_01786413.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|144983760|gb|EDJ91210.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
Length = 629
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 175/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEELSQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+T +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|319775010|ref|YP_004137498.1| DNA mismatch repair protein MutL, partial [Haemophilus influenzae
F3047]
gi|317449601|emb|CBY85806.1| DNA mismatch repair protein MutL, partial [Haemophilus influenzae
F3047]
Length = 445
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L +E D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIEWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP +P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + IQ+ ++ GG L++I+DNG GI KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGANKIQIDIENGGANLIRIRDNGCGIPKEELSLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++ ++
Sbjct: 74 RHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
IKP + GT + +LF+N P RRK L+ E+ I +V+ R A+ + FTL
Sbjct: 134 IKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|145510949|ref|XP_001441402.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408652|emb|CAK74005.1| unnamed protein product [Paramecium tetraurelia]
Length = 623
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 182/339 (53%), Gaps = 39/339 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKL + V+N+IAAGEV+QRP + +KE++ENS+DA + +I + + GL L++I DNG G
Sbjct: 2 IKKLPQEVINKIAAGEVVQRPYSVVKEMVENSIDAHAQNITIYLNNAGLDLIRIIDNGDG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED +++CER+ TSK+ EDL + +FGFRGEALASIS V+ +T+I+K K Y+
Sbjct: 62 IMKEDYELLCERYATSKIRAAEDLFQLFSFGFRGEALASISFVSEMTVISKRKDQVLGYK 121
Query: 127 WCTYLADLMALA-----------LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
L++++ + ++ L++ ++ + EEK+ + +L L S
Sbjct: 122 GTYNSQKLLSMSPIGCSDGTEIQIAQLFYNLEKRRQALNKSEEKKSILQLIQSL-SLHHS 180
Query: 176 QYQPSEKIVERACLLEIASLNNLELLSV------------EGTDDAFQLKVTGWITNVNF 223
Q Q + E C E +S + L+ +S + D ++ + T ++
Sbjct: 181 QVQ-FKLFYENKC--EFSSFSRLDTISSIMKINQTCIQEKSFSSDIYKYESHLIFTKLSS 237
Query: 224 STKKMTFLLFIN------NPIKRMIEQVYS-----IYLPKGSFPFVYLSLCMDPKNVDVN 272
K LFIN + +K+ I Q Y + + G + +VYLS+ + PK++D N
Sbjct: 238 VKYKRELCLFINDRFVDCDTLKKKITQAYQDCYLCLRVEDGGY-YVYLSIKLQPKDIDPN 296
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
VHP K V FL+ED I + L++ L T ++ T
Sbjct: 297 VHPNKKIVRFLNEDEISTEISEKLKQELSPQQTVKLVQT 335
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ +I + + GL L++I DNG GI KED +++CER+ TSK+ EDL + +FGFRGEA
Sbjct: 38 AQNITIYLNNAGLDLIRIIDNGDGIMKEDYELLCERYATSKIRAAEDLFQLFSFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ +T+I+K K Y+ +Y KL + P + GT+I LFYN+ RR
Sbjct: 98 LASISFVSEMTVISKRKDQVLGYKGTYNSQKLL-SMSPIGCSDGTEIQIAQLFYNLEKRR 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
+AL + SEE I ++ ++H+ V F L +N+
Sbjct: 157 QALNK-SEEKKSILQLIQSLSLHHSQVQFKLFYENK 191
>gi|16272041|ref|NP_438240.1| DNA mismatch repair protein [Haemophilus influenzae Rd KW20]
gi|260580629|ref|ZP_05848456.1| mismatch repair protein mutL [Haemophilus influenzae RdAW]
gi|1171080|sp|P44494.1|MUTL_HAEIN RecName: Full=DNA mismatch repair protein MutL
gi|1573016|gb|AAC21745.1| DNA mismatch repair protein (mutL) [Haemophilus influenzae Rd KW20]
gi|260092691|gb|EEW76627.1| mismatch repair protein mutL [Haemophilus influenzae RdAW]
Length = 629
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L +E D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIEWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFSHIDEVIRRIALTKFNTAFTL 189
>gi|342904078|ref|ZP_08725880.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21621]
gi|342904620|ref|ZP_08726419.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21621]
gi|341953041|gb|EGT79555.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21621]
gi|341954087|gb|EGT80581.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21621]
Length = 626
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 175/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ + +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIAELDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEELNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ + +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIAELDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFSHIDEVIRRIALTKFNTAFTL 189
>gi|373467549|ref|ZP_09558843.1| DNA mismatch repair protein [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371758270|gb|EHO47043.1| DNA mismatch repair protein [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 629
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 176/320 (55%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIANLDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADLMAL---------ALMEMS----------QYLQRDKEQIGDKEE--KQWYRTV 165
D+ +E+S ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVSNLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEALNQQ--LKRVAAICGDDFVKNALQIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIANLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVSNLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|329123087|ref|ZP_08251657.1| DNA mismatch repair protein MutL [Haemophilus aegyptius ATCC 11116]
gi|327471642|gb|EGF17084.1| DNA mismatch repair protein MutL [Haemophilus aegyptius ATCC 11116]
Length = 629
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L +E D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIEWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP +P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|145633371|ref|ZP_01789101.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145635252|ref|ZP_01790956.1| DNA mismatch repair protein [Haemophilus influenzae PittAA]
gi|144985934|gb|EDJ92536.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145267531|gb|EDK07531.1| DNA mismatch repair protein [Haemophilus influenzae PittAA]
Length = 629
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|417843734|ref|ZP_12489802.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21127]
gi|341948647|gb|EGT75267.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21127]
Length = 629
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 175/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ +Q+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGASKVQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIANLDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTNNGKIIRQYRPAEELNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ +Q+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ASKVQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIANLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|229845405|ref|ZP_04465536.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1]
gi|229811713|gb|EEP47411.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1]
Length = 629
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 174/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEQLNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|68248618|ref|YP_247730.1| DNA mismatch repair protein [Haemophilus influenzae 86-028NP]
gi|81336955|sp|Q4QPH7.1|MUTL_HAEI8 RecName: Full=DNA mismatch repair protein MutL
gi|68056817|gb|AAX87070.1| DNA mismatch repair protein MutL [Haemophilus influenzae 86-028NP]
Length = 629
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E I ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEAINQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|148827220|ref|YP_001291973.1| DNA mismatch repair protein [Haemophilus influenzae PittGG]
gi|166232091|sp|A5UFN4.1|MUTL_HAEIG RecName: Full=DNA mismatch repair protein MutL
gi|148718462|gb|ABQ99589.1| DNA mismatch repair protein [Haemophilus influenzae PittGG]
Length = 629
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 174/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E++ ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEELNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVAKPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|254516807|ref|ZP_05128865.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3]
gi|219674312|gb|EED30680.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3]
Length = 624
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 163/331 (49%), Gaps = 36/331 (10%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P IK+L + N+IAAGEV++RPA+ +KELLENSLDA + + + ++ G KL++++DNG
Sbjct: 2 PVIKRLPARLANQIAAGEVVERPASVVKELLENSLDAGALRVDIDIEAAGTKLIRVRDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI ED+ + +R TSK+ +DL + +FGFRGEALASI V+HL + + T +
Sbjct: 62 FGISAEDLPLALDRHATSKIGSLDDLEQVGSFGFRGEALASIGSVSHLIVTSNTAEAGSE 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPL 172
+ M + L + + + Q ++ D + E+ + ++ + L
Sbjct: 122 AHSASCSGRDMQVTL-KPAAHPQGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRL 180
Query: 173 MKSQYQPSEKIVE--------RACLLEIASLNNLELLSVEG--------TDDAFQLKVTG 216
S++ S + R C E L + LL G DA +L++ G
Sbjct: 181 ALSRFDVSFGLRHNGRQLQDLRRCDDEADRLRRVALLCGPGFVEHAVAIDRDATELRLHG 240
Query: 217 WITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ +FS + F N + + Q +S L +G P L L +DP V
Sbjct: 241 WVAQPSFSRSQADLQHFYVNGRYIRDKLVAHAVRQAFSDVLYQGRHPAFVLYLELDPAEV 300
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DVNVHPTKHEV F ++ + S L K L
Sbjct: 301 DVNVHPTKHEVRFRDGRSVHSFIYSTLHKAL 331
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + + ++ G KL++++DNG GI ED+ + +
Sbjct: 20 VVERPASVVKELLENS-----LDAGALRVDIDIEAAGTKLIRVRDNGFGISAEDLPLALD 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC-AYRASYIDSKLKD 406
R TSK+ +DL + +FGFRGEALASI V+HL + + T + A+ AS ++
Sbjct: 75 RHATSKIGSLDDLEQVGSFGFRGEALASIGSVSHLIVTSNTAEAGSEAHSASCSGRDMQV 134
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+KP A QGT + DLF+N P RRK L+ E+N + DVV R A+ V F L+
Sbjct: 135 TLKPAAHPQGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRLALSRFDVSFGLRHN 194
Query: 467 NENLADIR 474
L D+R
Sbjct: 195 GRQLQDLR 202
>gi|417846314|ref|ZP_12492322.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21639]
gi|341952716|gb|EGT79237.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M21639]
Length = 629
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMKTTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEALNQQ--LKRVAAICGDDFIKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ +K IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEAQTEAWQVYAQGRDMKTTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|90022314|ref|YP_528141.1| DNA mismatch repair protein [Saccharophagus degradans 2-40]
gi|89951914|gb|ABD81929.1| DNA mismatch repair protein MutL [Saccharophagus degradans 2-40]
Length = 630
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 163/335 (48%), Gaps = 45/335 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+IKKL + N+IAAGEV++RPA+ +KEL+ENS+DA + + V ++ GG+KL++++DNG
Sbjct: 2 PEIKKLSPRLANQIAAGEVVERPASVIKELVENSVDAGAKQLDVEIENGGVKLMRVRDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K D+ + R TSK+ +DL ++ T GFRGEALASIS VA L + + A
Sbjct: 62 CGIGKNDLPLALSRHATSKIYHLDDLEAVGTLGFRGEALASISSVARLKLTSNDGQQDTA 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPL 172
WC A + + + Q ++ D + EK Y +E L +
Sbjct: 122 --WCAQAEGRDMEAELSPAAHPQGTTVEVRDLFFNTPARRKFLRTEKTEYSRIEDILKRI 179
Query: 173 MKSQYQ----------------PSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQL 212
S+++ P+ + E+ A + A + N + + T L
Sbjct: 180 ALSRFELGFSLKNNGKVVHNWRPANSLAEQERRVAQICGPAFMENAVHVDINRTG----L 235
Query: 213 KVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
++ GW+ FS + F N + ++Q Y L G P L L +D
Sbjct: 236 RLWGWVALPTFSRSQADLQHFYVNGRAIKDRLVAHAVKQAYQDVLYHGRHPAYVLYLELD 295
Query: 266 PKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P NVDVNVHPTKHEV F + + + S L K L
Sbjct: 296 PANVDVNVHPTKHEVRFRDGRLVHDFLFSSLHKAL 330
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+ V ++ GG+KL++++DNG GI K D+ + R TSK+ +DL ++ T GFRGEALAS
Sbjct: 43 LDVEIENGGVKLMRVRDNGCGIGKNDLPLALSRHATSKIYHLDDLEAVGTLGFRGEALAS 102
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS VA L + + A+ A ++ + P A QGT + DLF+N P RRK L
Sbjct: 103 ISSVARLKLTSNDGQQDTAWCAQAEGRDMEAELSPAAHPQGTTVEVRDLFFNTPARRKFL 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
+ EY++I D++ R A+ +GF+LK + + + R
Sbjct: 163 RTEKTEYSRIEDILKRIALSRFELGFSLKNNGKVVHNWR 201
>gi|254787458|ref|YP_003074887.1| DNA mismatch repair protein [Teredinibacter turnerae T7901]
gi|237684748|gb|ACR12012.1| DNA mismatch repair protein MutL [Teredinibacter turnerae T7901]
Length = 613
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 154/318 (48%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + V V+QGG+KL++++DNG
Sbjct: 3 KIFTLSPRLANQIAAGEVVERPASVIKELVENSLDAGATQLDVEVEQGGVKLIRVRDNGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ + R TSK+ +DL ++ T GFRGEALASIS VA L + + T
Sbjct: 63 GISKEDLPLALSRHATSKIINLDDLEAVVTLGFRGEALASISSVARLRLTSNTGEEESG- 121
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLM 173
WC A + + + Q ++ D + E+ Y VE L L
Sbjct: 122 -WCVEAEGRDMEARLAPAGHPQGTSVEVRDLFFNTPARRKFLRTERTEYGRVEDVLKRLA 180
Query: 174 KSQY---------------------QPS-EKIVERACLLEIASLNNLELLSVEGTDDAFQ 211
S++ QP E+ V + C A + N +V D
Sbjct: 181 LSRFAQGFSLKNNGRVVHSWRPATTQPEQERRVAQIC--GPAFMEN----AVHVDIDRAG 234
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + I Q Y L G P L L +
Sbjct: 235 LRLWGWVALPTFSRSQADLQHFYVNGRAIRDKLVSHAIRQAYQDVLYHGRHPAFVLYLEL 294
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP NVDVNVHPTKHEV F
Sbjct: 295 DPGNVDVNVHPTKHEVRF 312
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + V V+QGG+KL++++DNG GI KED+ +
Sbjct: 20 VVERPASVIKELVENS-----LDAGATQLDVEVEQGGVKLIRVRDNGHGISKEDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL ++ T GFRGEALASIS VA L + + T + ++
Sbjct: 75 RHATSKIINLDDLEAVVTLGFRGEALASISSVARLRLTSNTGEEESGWCVEAEGRDMEAR 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ P QGT + DLF+N P RRK L+ EY ++ DV+ R A+ GF+LK
Sbjct: 135 LAPAGHPQGTSVEVRDLFFNTPARRKFLRTERTEYGRVEDVLKRLALSRFAQGFSLK 191
>gi|407473974|ref|YP_006788374.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
gi|407050482|gb|AFS78527.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
Length = 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 178/330 (53%), Gaps = 35/330 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE +N+IAAGEV++RP++ +KEL+ENS+DA+STSI + + GG K +++ DNG G
Sbjct: 5 IKLLDEKTINKIAAGEVVERPSSVVKELVENSIDAQSTSITIEIISGGKKYIRVTDNGVG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+++ R +TSK+++ EDL S++T GFRGEALASIS V+ L +ITKT + +
Sbjct: 65 ISKKDIELAFLRHSTSKISKVEDLGSVNTLGFRGEALASISAVSQLEVITKTSSDLSGVK 124
Query: 127 --------------WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV-- 170
C L+ L Q+ + G E + + + L
Sbjct: 125 AIINGGVVREKLDVGCPKGTTLIVRNLFYNVPVRQKFLKSEG--TEASYISDIVYKLALS 182
Query: 171 -PLMKSQY-QPSEKIVERACLLEIASLNNLELLSVEGTDDAFQL-------KVTGWITNV 221
P + Y + +++IV+ ++ S LL D F+L K+ G I+N
Sbjct: 183 NPAISFNYIKDNKQIVKTPGNGDMKS-TVYSLLGKSFLDSTFELCSEANGIKIHGLISNT 241
Query: 222 NFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+F+ + + +F+N I R +E Y +P +P + + +D N+DVNVH
Sbjct: 242 SFTRGNRSSQYIFVNGRYIKDENISRSVEDSYRTVIPSNRYPVFLIFIDIDSINLDVNVH 301
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
PTK EV F ++D I + + + ++ TLL +N
Sbjct: 302 PTKTEVRFSNKDIINKFLYNSVKDTLLSNN 331
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S QSTSI + + GG K +++ DNG GI K+D+++
Sbjct: 21 VVERPSSVVKELVENS-----IDAQSTSITIEIISGGKKYIRVTDNGVGISKKDIELAFL 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+++ EDL S++T GFRGEALASIS V+ L +ITKT + +A +++
Sbjct: 76 RHSTSKISKVEDLGSVNTLGFRGEALASISAVSQLEVITKTSSDLSGVKAIINGGVVREK 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ +GT +I +LFYN+P R+K LK E + I+D+V + A+ NP + F K N
Sbjct: 136 LD-VGCPKGTTLIVRNLFYNVPVRQKFLKSEGTEASYISDIVYKLALSNPAISFNYIKDN 194
Query: 468 ENLA 471
+ +
Sbjct: 195 KQIV 198
>gi|419839700|ref|ZP_14363105.1| DNA mismatch repair protein [Haemophilus haemolyticus HK386]
gi|386909123|gb|EIJ73800.1| DNA mismatch repair protein [Haemophilus haemolyticus HK386]
Length = 626
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS ++ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSISRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEALNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVINHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS ++ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSISRLTLTSRTEAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|145642149|ref|ZP_01797718.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|145273140|gb|EDK13017.1| DNA mismatch repair protein [Haemophilus influenzae 22.4-21]
Length = 633
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
T L + QY+P+E + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FSTAFTLTHNGKIIRQYRPAEALNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVINHAIRQAYAQYLPSDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +V+ R A+ FTL
Sbjct: 159 KFLRTDKTEFSHIDEVIRRIALTKFSTAFTL 189
>gi|260582015|ref|ZP_05849810.1| DNA mismatch repair protein [Haemophilus influenzae NT127]
gi|260094905|gb|EEW78798.1| DNA mismatch repair protein [Haemophilus influenzae NT127]
Length = 633
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+ + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPASDLNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+T +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|417840837|ref|ZP_12486945.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19501]
gi|341950648|gb|EGT77235.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19501]
Length = 629
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTTKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T LM + QY+P+ + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLMHNGKIVRQYRPAFDLNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ ++ KP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQTEAWQVYAQGRDMETTTKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|372270426|ref|ZP_09506474.1| DNA mismatch repair protein [Marinobacterium stanieri S30]
Length = 628
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 163/313 (52%), Gaps = 39/313 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLD+ + I++ ++QGG+KL++++DNG+G
Sbjct: 4 IHLLSPQLANQIAAGEVVERPASVVKELLENSLDSGADRIELDIEQGGVKLIRLRDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK+ Q EDL ++ + GFRGEALASIS V+ T+ ++T T A+
Sbjct: 64 IEKDDLPLALSRHATSKILQLEDLEAVGSLGFRGEALASISSVSRFTLTSRTSTQDAAWS 123
Query: 127 WCTYLADLM---------ALALMEMSQ-YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQ 176
D+ A +EM + + K EK +R +E + L S+
Sbjct: 124 VSAQGRDMSTEVVPAAHPAGTTVEMRDLFFNTPARRKFLKTEKTEFRHLEEVVKRLALSR 183
Query: 177 Y------QPSEKIVE--RACLLEIASLNNLELL----------SVEGTDDAFQLKVTGWI 218
Y + + K+V R EIA L L +++ +A L++ GW+
Sbjct: 184 YDVGFGLRHNAKVVHQLRPADTEIAREQRLGQLLGKAFVEQSVALDVVAEASGLRLWGWM 243
Query: 219 TNVNFS---TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
FS + F F+N + R + Q Y L G P L L +DP V
Sbjct: 244 GLPTFSRSLPDQQYF--FVNGRVIRDKVVTHAVRQAYQDVLFHGRHPAYVLYLELDPALV 301
Query: 270 DVNVHPTKHEVHF 282
DVNVHPTKHEV F
Sbjct: 302 DVNVHPTKHEVRF 314
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 116/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I++ ++QGG+KL++++DNG+GI K+D+ +
Sbjct: 20 VVERPASVVKELLENSLDS-----GADRIELDIEQGGVKLIRLRDNGSGIEKDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ Q EDL ++ + GFRGEALASIS V+ T+ ++T T A+ S +
Sbjct: 75 RHATSKILQLEDLEAVGSLGFRGEALASISSVSRFTLTSRTSTQDAAWSVSAQGRDMSTE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A GT + DLF+N P RRK LK E+ + +VV R A+ VGF L+
Sbjct: 135 VVPAAHPAGTTVEMRDLFFNTPARRKFLKTEKTEFRHLEEVVKRLALSRYDVGFGLRHNA 194
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+ + +R + + + +G + G
Sbjct: 195 KVVHQLRPADTEIAREQRLGQLLG 218
>gi|323448482|gb|EGB04380.1| hypothetical protein AURANDRAFT_55239 [Aureococcus anophagefferens]
Length = 784
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 123/196 (62%), Gaps = 6/196 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ +I V+V +GG+KLL++ D+G+G+RK D+ ++C R TSKL FEDL SI +FGFRGEA
Sbjct: 83 ARTIAVSVAEGGVKLLRVSDDGSGVRKADLKLLCVRHATSKLRTFEDLQSIQSFGFRGEA 142
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT-R 431
LASISHVA L+I+TKT+ CAYR +Y D + D PCAG GT I EDLFYN+PT R
Sbjct: 143 LASISHVAKLSILTKTRDGACAYRCAYRDGEPVDGPTPCAGADGTTITVEDLFYNMPTRR 202
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG- 490
R +++Y+ ++ V YAVH G ++ + + A +VN + + + I
Sbjct: 203 RAMAASAADQYHFVSRVCGAYAVHYAGRGVSVSCRKAHGA---CDVNVAGGDTLAAIRAV 259
Query: 491 -NNISRRVRRFSSASQ 505
++ VR FS A +
Sbjct: 260 HGAVADDVREFSCARK 275
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 96/124 (77%), Gaps = 1/124 (0%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LD ++RIAAGEV+ RP NALKE+ EN++DA + +I V+V +GG+KLL++ D+G+G
Sbjct: 47 IVPLDRATIDRIAAGEVVARPGNALKEMFENAIDAGARTIAVSVAEGGVKLLRVSDDGSG 106
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+RK D+ ++C R TSKL FEDL SI +FGFRGEALASISHVA L+I+TKT+ CAYR
Sbjct: 107 VRKADLKLLCVRHATSKLRTFEDLQSIQSFGFRGEALASISHVAKLSILTKTRDGACAYR 166
Query: 127 WCTY 130
C Y
Sbjct: 167 -CAY 169
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEK 298
PF YL++ + +VDVNVHPTK EV FL+E I++ ++ LEK
Sbjct: 338 PFAYLAIDVPGHHVDVNVHPTKKEVAFLYEAPILDTIRCHLEK 380
>gi|88704498|ref|ZP_01102212.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
gi|88701549|gb|EAQ98654.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
Length = 629
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 190/405 (46%), Gaps = 43/405 (10%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P IK+L + N+IAAGEV++RPA+ +KELLENSLDA + + + ++ G KL++I+D+G
Sbjct: 2 PLIKRLPPRLANQIAAGEVVERPASVVKELLENSLDAGARRVDLDIEAAGTKLIRIRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI +D+ + +R TSK+ +DL + +FGFRGEALASI V+HL + + T +
Sbjct: 62 SGIASDDLPLALDRHATSKIESLDDLEQVGSFGFRGEALASIGSVSHLVVTSNTAEAGSD 121
Query: 125 YRWCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLM 173
+ + M + L + + + + E+ + ++ + +
Sbjct: 122 GQAASCSGRDMEVTLKPAAHPRGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRIA 181
Query: 174 KSQYQPSEKIVE--------RAC------LLEIASLNNLELL--SVEGTDDAFQLKVTGW 217
S++ S + R C L +ASL + +V +A L++ GW
Sbjct: 182 LSRFDVSFALRHNGRQLRDLRRCDNEADQLRRVASLCGPAFVENAVAIDRNAGDLRLHGW 241
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ +FS + F N + + Q +S L +G P L L +DP VD
Sbjct: 242 VAQPSFSRSQADLQHFYVNGRYIRDKLVVHAVRQAFSDVLYQGRHPAFVLYLELDPAEVD 301
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS-RVFYTQSTSIQVTVKQGGLKLLQ 329
VNVHPTKHEV F ++ + S L K L S TQ++ V+ G L LL
Sbjct: 302 VNVHPTKHEVRFRDGRSVHSFIYSTLHKALADIRPSDSAVPTQASMSPVSASTGRLDLL- 360
Query: 330 IQDNGTGIRKEDMDI---VCERFTTSKLTQFEDLNSISTF-GFRG 370
G +R+++M + R T + F D F G RG
Sbjct: 361 ---TGELVRQQEMGLREQGAGRLTAANPGVFADRGDRGDFQGGRG 402
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 6/188 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + + ++ G KL++I+D+G+GI +D+ + +
Sbjct: 20 VVERPASVVKELLENS-----LDAGARRVDLDIEAAGTKLIRIRDDGSGIASDDLPLALD 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKD 406
R TSK+ +DL + +FGFRGEALASI V+HL + + T + +A+ + ++
Sbjct: 75 RHATSKIESLDDLEQVGSFGFRGEALASIGSVSHLVVTSNTAEAGSDGQAASCSGRDMEV 134
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+KP A +GT + DLF+N P RRK L+ E+N + DVV R A+ V F L+
Sbjct: 135 TLKPAAHPRGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRIALSRFDVSFALRHN 194
Query: 467 NENLADIR 474
L D+R
Sbjct: 195 GRQLRDLR 202
>gi|145636727|ref|ZP_01792393.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
gi|145270025|gb|EDK09962.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
Length = 629
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 173/320 (54%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+ + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAFDLNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPADAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+T +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFSHIDEVIRRIALTKFNTAFTL 189
>gi|110835066|ref|YP_693925.1| DNA mismatch repair protein [Alcanivorax borkumensis SK2]
gi|110648177|emb|CAL17653.1| DNA mismatch repair protein MutL [Alcanivorax borkumensis SK2]
Length = 622
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 168/333 (50%), Gaps = 39/333 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD + N+IAAGEV++RPA+ LKELLEN+LDA S SI V V+QGG+KLL+++DNG+
Sbjct: 3 KIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGSESISVDVEQGGVKLLRVRDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + R TSK+ +DL +I T GFRGEALA+IS V+ L++ + + P +
Sbjct: 63 GIERDDLPLALSRHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEPEGW 122
Query: 126 RWCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMK 174
+ D MA ++ + + + EK + +E +
Sbjct: 123 QVTVEGRD-MAPSVSPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIAL 181
Query: 175 SQYQPS------EKIVER--ACL---LEIASLNNL-------ELLSVEGTDDAFQLKVTG 216
S++ + +K++ + A L L A + L + + V+ D +L G
Sbjct: 182 SEFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFIEQAVPVDVERDGLRLH--G 239
Query: 217 WITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ FS + F N + + Q YS L G P L L +DP V
Sbjct: 240 WMGLPTFSRSQADLQYFYVNGRVIRDKVVSHAVRQAYSDVLYHGRHPAYVLFLELDPAMV 299
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
DVNVHPTKHEV F + + + S L + + G
Sbjct: 300 DVNVHPTKHEVRFREQRMVHGFLYSSLHRVIAG 332
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L S SI V V+QGG+KLL+++DNG+GI ++D+ +
Sbjct: 20 VVERPASVLKELL-----ENALDAGSESISVDVEQGGVKLLRVRDNGSGIERDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I T GFRGEALA+IS V+ L++ + + P ++ + +
Sbjct: 75 RHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEPEGWQVTVEGRDMAPS 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ P +GT + DLF+N P RR+ L+ E+N + +V R A+ + F L
Sbjct: 135 VSPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALSEFNTAFRL 190
>gi|417839744|ref|ZP_12485914.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19107]
gi|417839777|ref|ZP_12485946.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19107]
gi|341951749|gb|EGT78304.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19107]
gi|341951845|gb|EGT78397.1| DNA mismatch repair protein mutL [Haemophilus haemolyticus M19107]
Length = 626
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ + A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRREAQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+T L + QY+P+E + ++ L +A++ + L ++ D L ++G
Sbjct: 183 FNTAFTLTHNGKIIRQYRPAEALNQQ--LKRVAAICGDDFVKNALRIDWKHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +V
Sbjct: 239 WVATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ + A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRREAQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|422294380|gb|EKU21680.1| DNA mismatch repair protein MLH1, partial [Nannochloropsis gaditana
CCMP526]
Length = 499
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 10/145 (6%)
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYI 400
D ++CERFTTSKL FEDL SI++FGFRGEALASI+HVA ++I +KT+ SPCAY+A +
Sbjct: 10 DFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTRDSPCAYKARFQ 69
Query: 401 DSKLKDPI--------KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRY 452
D KL + +PCAG GT I AEDLFYN+ TRR+ALK P++ Y + DVV+RY
Sbjct: 70 DGKLVPGVGVGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRY 129
Query: 453 AVH--NPHVGFTLKKQNENLADIRT 475
AVH + FT +KQ + D+ T
Sbjct: 130 AVHFGKDGISFTCRKQGQARPDLYT 154
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 18/164 (10%)
Query: 196 NNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIY 249
N + S +G ++ K G+++N NF+ KK F+LFINN IKR++E VY+
Sbjct: 222 GNAGVRSAQG-EEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPI 280
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
LP + PF+YL+L + P +VDVNVHPTK EVHFLHED ++ ++ + LE L G+NTSR F
Sbjct: 281 LPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTF 340
Query: 310 YTQSTS---------IQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
Y +S + QV G L Q D T I ED DI
Sbjct: 341 YGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMI--EDKDI 382
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 48/56 (85%)
Query: 71 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
D ++CERFTTSKL FEDL SI++FGFRGEALASI+HVA ++I +KT+ SPCAY+
Sbjct: 10 DFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTRDSPCAYK 65
>gi|386265563|ref|YP_005829055.1| DNA mismatch repair protein MutL [Haemophilus influenzae R2846]
gi|309972799|gb|ADO96000.1| DNA mismatch repair protein MutL [Haemophilus influenzae R2846]
Length = 637
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 170/318 (53%), Gaps = 38/318 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGWI 218
+T L + QY+P+ + ++ + + ++ L ++ D L ++GW+
Sbjct: 183 FNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHD--DLHLSGWV 240
Query: 219 TNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +VDV
Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300
Query: 272 NVHPTKHEVHFLHEDTII 289
NVHPTKHEV F H+ +I
Sbjct: 301 NVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|118366123|ref|XP_001016280.1| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila]
gi|89298047|gb|EAR96035.1| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 731
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 161/308 (52%), Gaps = 43/308 (13%)
Query: 31 LKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDL 90
+KEL+EN LDA S+ I V + QGGLK L ++DNG+GI K+D ++CERF TSK+ +F DL
Sbjct: 20 VKELIENCLDAGSSEISVGLVQGGLKQLIVEDNGSGIHKDDFPLLCERFATSKINEFNDL 79
Query: 91 NSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRW----------------CT--YLA 132
S+ +FGFRGEALASIS V++L I ++ S Y+ CT
Sbjct: 80 QSLVSFGFRGEALASISFVSNLKITSRKPNSDLGYKASFKNGVMLGEEPEAVNCTEGTTV 139
Query: 133 DLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQ---------PSEKI 183
D+ L Y R K ++E+K+ + + + K +++ S +
Sbjct: 140 DVQDLFF----NYDARRKSLNVNEEKKRVLKLIGQFAMHHAKLRFKFKSDNQIQFSSHSV 195
Query: 184 VERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------P 237
+ L +I + + S E +Q+K G +N+ + K LFINN
Sbjct: 196 LGSTELQQITKIADKSFTSCESESTEYQVKFKGTFSNIGATKKYKEITLFINNRLVECES 255
Query: 238 IKRMIEQVY-----SIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV 292
IK+ +E+ Y SI+ +G + F YLSL M+PKN+D NVHPTK EV FL E I + +
Sbjct: 256 IKKAVERSYQSCYQSIHEEEGGY-FCYLSLEMNPKNLDPNVHPTKKEVKFLFEYEIAKEI 314
Query: 293 QSMLEKTL 300
+S + + L
Sbjct: 315 ESWIFENL 322
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I V + QGGLK L ++DNG+GI K+D ++CERF TSK+ +F DL S+ +FGFRGEA
Sbjct: 32 SSEISVGLVQGGLKQLIVEDNGSGIHKDDFPLLCERFATSKINEFNDLQSLVSFGFRGEA 91
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGN--QGTQIIAEDLFYNIPT 430
LASIS V++L I ++ S Y+AS+ + + +P A N +GT + +DLF+N
Sbjct: 92 LASISFVSNLKITSRKPNSDLGYKASFKNGVMLGE-EPEAVNCTEGTTVDVQDLFFNYDA 150
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
RRK+L +EE ++ ++ ++A+H+ + F K N+
Sbjct: 151 RRKSLN-VNEEKKRVLKLIGQFAMHHAKLRFKFKSDNQ 187
>gi|408484143|ref|ZP_11190362.1| DNA mismatch repair protein [Pseudomonas sp. R81]
Length = 638
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 172/341 (50%), Gaps = 49/341 (14%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+D +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 6 LDNGSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRV 65
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T++
Sbjct: 66 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRS 125
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 126 AEQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 177
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 178 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGPGFLEQALPIE 237
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 238 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 297
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L +DP VDVNVHPTKHEV F + + + L +TL
Sbjct: 298 LFFEVDPSVVDVNVHPTKHEVRFRDGRMVHDFLYGTLHRTL 338
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 28 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+++ A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQVETEGRDMAPR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENL 470
+ +
Sbjct: 203 KTI 205
>gi|89094654|ref|ZP_01167591.1| DNA mismatch repair protein [Neptuniibacter caesariensis]
gi|89081124|gb|EAR60359.1| DNA mismatch repair protein [Neptuniibacter caesariensis]
Length = 627
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 165/314 (52%), Gaps = 39/314 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ +KE+LENSLDA + + V V+QGG+KL++I+DNG
Sbjct: 3 RIHLLSPRLANQIAAGEVVERPASVIKEILENSLDAGANKVDVDVEQGGVKLMRIRDNGF 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+T EDL ++ + GFRGEALASIS V+ LT+ ++ A+
Sbjct: 63 GIEKDDLPLALSRHATSKITLLEDLEAVGSLGFRGEALASISSVSRLTLTSRQADQDNAW 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLM 173
+ T D+ A +E + + ++ D K EK +R ++ + L
Sbjct: 123 QVQTEGRDME--AQLEPAAHPTGTTVEVKDLFFNTPARRKFLKTEKTEFRHLDEVVKRLA 180
Query: 174 KSQYQPSEKIVERACLLEIASLNNLEL------LSVEGT---DDAFQ---------LKVT 215
S++ + ++ ++ + EL S+ G+ D+A + L++
Sbjct: 181 LSRFDVAFQLRHNGKVIHQLHQADSELEQERRVASICGSAFIDNAVKADVIAEASGLRLW 240
Query: 216 GWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ FS + F+N + R + Q Y+ L G P L L +DP
Sbjct: 241 GWVGLPTFSRSQADLQYFFVNGRMIRDKVVTHAVRQAYADVLYHGRHPAYVLYLELDPAL 300
Query: 269 VDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 301 VDVNVHPTKHEVRF 314
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + V V+QGG+KL++I+DNG GI K+D+ +
Sbjct: 20 VVERPASVIKEILENS-----LDAGANKVDVDVEQGGVKLMRIRDNGFGIEKDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+T EDL ++ + GFRGEALASIS V+ LT+ ++ A++ ++
Sbjct: 75 RHATSKITLLEDLEAVGSLGFRGEALASISSVSRLTLTSRQADQDNAWQVQTEGRDMEAQ 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + +DLF+N P RRK LK E+ + +VV R A+ V F L+
Sbjct: 135 LEPAAHPTGTTVEVKDLFFNTPARRKFLKTEKTEFRHLDEVVKRLALSRFDVAFQLR 191
>gi|148825652|ref|YP_001290405.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
gi|166232090|sp|A5UB71.1|MUTL_HAEIE RecName: Full=DNA mismatch repair protein MutL
gi|148715812|gb|ABQ98022.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
Length = 629
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 170/318 (53%), Gaps = 38/318 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGWI 218
+T L + QY+P+ + ++ + + ++ L ++ D L ++GW+
Sbjct: 183 FNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHD--DLHLSGWV 240
Query: 219 TNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +VDV
Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300
Query: 272 NVHPTKHEVHFLHEDTII 289
NVHPTKHEV F H+ +I
Sbjct: 301 NVHPTKHEVRF-HQQRLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|374618977|ref|ZP_09691511.1| DNA mismatch repair protein MutL [gamma proteobacterium HIMB55]
gi|374302204|gb|EHQ56388.1| DNA mismatch repair protein MutL [gamma proteobacterium HIMB55]
Length = 628
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 162/333 (48%), Gaps = 40/333 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PKI++LD + N+IAAGEV++RPA+ +KELLEN++DA++ + V +++GG+K ++I DNG
Sbjct: 4 PKIRQLDNRLANQIAAGEVVERPASVVKELLENAIDAQAGVVSVDIEEGGVKRIRITDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI ED+ + R TSK+ +DL +++T GFRGEALASI+ V+ L+I + T P
Sbjct: 64 IGIADEDLPLALARHATSKIASIDDLEAVATLGFRGEALASIASVSKLSITSNTSDLPAN 123
Query: 125 YRWCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYRT 164
R M +++ + ++L+ ++ + EE
Sbjct: 124 GRSAYCEGREMQVSISPQAHPRGTTLDIRDLFYNTPARRKFLRTERTEYARIEEVVKRTA 183
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ----------LKV 214
+ H V + S + K+++R + ++ V G A Q L +
Sbjct: 184 LAHPEVAFVLSH---NGKVIQRLPAGSADADLQRRVIGVCGEAFAHQSVVVDRVAHGLSL 240
Query: 215 TGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
GW+ FS + F N I + Q Y L G P L L +D
Sbjct: 241 RGWVGLPTFSRAQADLQYFFVNGRVVKDKVITHAVRQAYRDVLYGGRHPAYVLFLDLDAN 300
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VDVNVHPTKHEV F ++ V S L +TL
Sbjct: 301 RVDVNVHPTKHEVRFRDSRSVHGFVFSTLGRTL 333
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L Q+ + V +++GG+K ++I DNG GI ED+ +
Sbjct: 22 VVERPASVVKELL-----ENAIDAQAGVVSVDIEEGGVKRIRITDNGIGIADEDLPLALA 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKD 406
R TSK+ +DL +++T GFRGEALASI+ V+ L+I + T P R++Y + + ++
Sbjct: 77 RHATSKIASIDDLEAVATLGFRGEALASIASVSKLSITSNTSDLPANGRSAYCEGREMQV 136
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
I P A +GT + DLFYN P RRK L+ EY +I +VV R A+ +P V F L
Sbjct: 137 SISPQAHPRGTTLDIRDLFYNTPARRKFLRTERTEYARIEEVVKRTALAHPEVAFVL 193
>gi|229846987|ref|ZP_04467093.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1]
gi|229810071|gb|EEP45791.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1]
Length = 629
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 170/318 (53%), Gaps = 38/318 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
D+ + ++L+ DK + +E ++ T
Sbjct: 123 VYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALTK 182
Query: 166 EHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGWI 218
+T L + QY+P+ + ++ + + ++ L ++ D L ++GW+
Sbjct: 183 FNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHD--DLHLSGWV 240
Query: 219 TNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
NFS T+ +IN + R I Q Y+ YLP ++P L + ++P +VDV
Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300
Query: 272 NVHPTKHEVHFLHEDTII 289
NVHPTKHEV F H+ +I
Sbjct: 301 NVHPTKHEVRF-HQQRLI 317
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALTKFNTAFTL 189
>gi|154338371|ref|XP_001565410.1| putative mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062459|emb|CAM42321.1| putative mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1368
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 22/172 (12%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+QV +GGL++LQ+ D+G+GI KED+ ++CER+ TSKL FEDL+ +++FGFRGEALAS
Sbjct: 43 VQVVAAEGGLEVLQVSDDGSGIHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALAS 102
Query: 376 ISHVAHLTIITK---------------------TKTSPCAYRASYIDSKLKDPIKPCAGN 414
IS+V+ +T+ T+ T + A+R Y++ L +PCAGN
Sbjct: 103 ISYVSRVTVTTRRHQACDEASDGAPSACAHALSTAGAAVAWRCQYLNGALLGDPQPCAGN 162
Query: 415 QGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
GT I E LFYN RR++L+ SEE+ +I D+VSRYA+ P VGFT ++
Sbjct: 163 PGTTIRVEKLFYNTLVRRRSLRA-SEEWGRIVDIVSRYALAFPAVGFTCHRE 213
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 106/156 (67%), Gaps = 7/156 (4%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL + V+NRIAAGEV+QRP+ ALKELLENS+DA +QV +GGL++LQ+ D+G+G
Sbjct: 4 IHKLTDDVINRIAAGEVVQRPSAALKELLENSIDAGCNRVQVVAAEGGLEVLQVSDDGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK-----TKTS 121
I KED+ ++CER+ TSKL FEDL+ +++FGFRGEALASIS+V+ +T+ T+ + S
Sbjct: 64 IHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRVTVTTRRHQACDEAS 123
Query: 122 PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKE 157
A C + A+ QYL + +GD +
Sbjct: 124 DGAPSACAHALSTAGAAVAWRCQYL--NGALLGDPQ 157
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ G+ ++ + +K +FIN I++ I+ VY+ L G+ PF L L +
Sbjct: 384 LVGYTSDPTLTQRKSYLCVFINQRLVESAAIRKAIDAVYNGVLTGGNRPFTVLLLSVPTD 443
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
VDVNVHPTK EV L E+ I+ RV + +L + +R
Sbjct: 444 RVDVNVHPTKKEVCLLDEELIVLRVAEVCRGAVLEAAAAR 483
>gi|152996647|ref|YP_001341482.1| DNA mismatch repair protein [Marinomonas sp. MWYL1]
gi|150837571|gb|ABR71547.1| DNA mismatch repair protein MutL [Marinomonas sp. MWYL1]
Length = 641
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 158/316 (50%), Gaps = 45/316 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ +KELLENSLDA ++ + + V+QGG++ ++I+DNGT
Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAGASQLDIDVEQGGVRRIKIRDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL ++ T GFRGEALASIS V+ + + ++ ++ A+
Sbjct: 63 GIMKDDLSLALSRHATSKIITLDDLEAVRTLGFRGEALASISSVSRMHLTSQAESEVEAW 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLM 173
R D MA A+ S + Q ++ D + EK + +E + L
Sbjct: 123 RVEAEGKD-MATAIRPAS-HPQGTTIEVRDLFFNTPARRKFLRTEKTEFAHLEEVVKRLA 180
Query: 174 KSQYQPSEKIVER--------------------ACLLEIASLNNLELLSVEGTDDAFQLK 213
S+Y+ ++ A LL + N L VE A L+
Sbjct: 181 LSRYETGFRLSHNGKQVYDLRPVTDQLHAEHRLATLLGKKFIENSLTLDVE----AAGLR 236
Query: 214 VTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ GWI FS + F N + + Q Y L G P L L +DP
Sbjct: 237 LWGWIGLPTFSRSQADLQYFFVNGRVVKDKLVAHAVRQAYRDVLYNGRHPTFVLYLELDP 296
Query: 267 KNVDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 297 STVDVNVHPTKHEVRF 312
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 111/196 (56%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S ++ + + V+QGG++ ++I+DNGTGI K+D+ +
Sbjct: 20 VVERPASVVKELLENS-----LDAGASQLDIDVEQGGVRRIKIRDNGTGIMKDDLSLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL ++ T GFRGEALASIS V+ + + ++ ++ A+R +
Sbjct: 75 RHATSKIITLDDLEAVRTLGFRGEALASISSVSRMHLTSQAESEVEAWRVEAEGKDMATA 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P + QGT I DLF+N P RRK L+ E+ + +VV R A+ GF L
Sbjct: 135 IRPASHPQGTTIEVRDLFFNTPARRKFLRTEKTEFAHLEEVVKRLALSRYETGFRLSHNG 194
Query: 468 ENLADIRTNVNSSHSE 483
+ + D+R + H+E
Sbjct: 195 KQVYDLRPVTDQLHAE 210
>gi|406940418|gb|EKD73186.1| hypothetical protein ACD_45C00417G0009 [uncultured bacterium]
Length = 591
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 178/359 (49%), Gaps = 48/359 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KL T+ N+IAAGEVI+RPA+ +KEL+ENSLDA +T I + ++ GG +L+++ DNG
Sbjct: 3 RIQKLTTTLANQIAAGEVIERPASVVKELIENSLDATATKIDLEIENGGTRLIRVHDNGC 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK-TKTSPCA 124
GI +D+ + +R TTSK+ DL I T GFRGEALASIS VA LT+ + +
Sbjct: 63 GIHADDLILALDRHTTSKIKTLADLERIFTLGFRGEALASISSVARLTLTSSVVNQTGWQ 122
Query: 125 YRWCT--YLADLMALALMEMS---------------QYLQRDKEQIGDKEEKQWYRTVEH 167
+ CT L +L +A + + ++L+ +K + +E + V
Sbjct: 123 VKTCTTESLPELNPMAHPQGTTIEIRDLFFNTPARKKFLRTEKTEFAHIDE--LIKRVAL 180
Query: 168 TLVPL---------MKSQYQPSEKIVERACLLE----IASLNNLELLSVEGTDDAFQLKV 214
+ P+ + Y+ + ER +E A L N +S E LK+
Sbjct: 181 SCFPIQFTLKHNQKLIRHYRAAHSDKEREQRIESLCGSAFLENALHISAETAG----LKL 236
Query: 215 TGWITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+GWI FS + F +N+ I R + Q Y L P L L + P+
Sbjct: 237 SGWIALPTFSRSQADLQYFYVNSRIVRDKLVNHAVRQAYHDVLYGDRHPAFVLFLEISPE 296
Query: 268 NVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQ 322
VDVNVHPTKHEV F L D I +Q L G+NT + T T ++ VK+
Sbjct: 297 QVDVNVHPTKHEVRFRESRLVHDFIYRSLQDALAHIRPGNNTPAITQTMQTFTEIPVKK 355
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 10/196 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S +T I + ++ GG +L+++ DNG GI +D+ + +
Sbjct: 20 VIERPASVVKELIENS-----LDATATKIDLEIENGGTRLIRVHDNGCGIHADDLILALD 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSK+ DL I T GFRGEALASIS VA LT +T + + ++ ++
Sbjct: 75 RHTTSKIKTLADLERIFTLGFRGEALASISSVARLT-LTSSVVNQTGWQVKTCTTESLPE 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I DLF+N P R+K L+ E+ I +++ R A+ + FTL K N
Sbjct: 134 LNPMAHPQGTTIEIRDLFFNTPARKKFLRTEKTEFAHIDELIKRVALSCFPIQFTL-KHN 192
Query: 468 ENLADIRTNVNSSHSE 483
+ L IR + ++HS+
Sbjct: 193 QKL--IR-HYRAAHSD 205
>gi|94500524|ref|ZP_01307055.1| DNA mismatch repair protein [Bermanella marisrubri]
gi|94427314|gb|EAT12293.1| DNA mismatch repair protein [Bermanella marisrubri]
Length = 634
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 162/311 (52%), Gaps = 35/311 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPAN +KEL+ENSLDA +T I+V +QGG+KL++I+DNG+
Sbjct: 3 RIHVLSPRLANQIAAGEVVERPANVVKELVENSLDAGATRIEVDAEQGGVKLIRIRDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL S+ + GFRGEALASI+ V+ L++ + + S AY
Sbjct: 63 GIEKDDLPLSLSRHATSKIVDLDDLESVQSLGFRGEALASIASVSRLSLSSHEQESELAY 122
Query: 126 RWCTYLADLMALA---------LMEMSQ-YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
+ D+ +EM + + + EK + +E + + S
Sbjct: 123 QVTAEGRDMATEVKPCAHPVGTTVEMRDLFFNTPARRKFLRTEKTEFNHLEEVVKRMALS 182
Query: 176 QYQPS------EKIVE--RACLL------EIASLNNLELL--SVEGTDDAFQLKVTGWI- 218
+Y S K++ R C IA+L + + + +V +A LK+ GW+
Sbjct: 183 RYDVSFQLRHNNKVIHSLRPCSSAFDQEKRIATLLSAQFMKEAVRIDMEAAGLKLWGWVG 242
Query: 219 -TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N S M + F+N I R I Q Y L G L L +DP VDV
Sbjct: 243 LPTFNRSQADMQY-FFVNGRIVRDKLVAHAIRQAYQDVLYHGRHSAFVLYLELDPALVDV 301
Query: 272 NVHPTKHEVHF 282
NVHPTKHEV F
Sbjct: 302 NVHPTKHEVRF 312
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 100/162 (61%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V +QGG+KL++I+DNG+GI K+D+ + R TSK+ +DL S+ + GFRGEA
Sbjct: 40 ATRIEVDAEQGGVKLIRIRDNGSGIEKDDLPLSLSRHATSKIVDLDDLESVQSLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ L++ + + S AY+ + + +KPCA GT + DLF+N P RR
Sbjct: 100 LASIASVSRLSLSSHEQESELAYQVTAEGRDMATEVKPCAHPVGTTVEMRDLFFNTPARR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+N + +VV R A+ V F L+ N+ + +R
Sbjct: 160 KFLRTEKTEFNHLEEVVKRMALSRYDVSFQLRHNNKVIHSLR 201
>gi|333907812|ref|YP_004481398.1| DNA mismatch repair protein mutL [Marinomonas posidonica
IVIA-Po-181]
gi|333477818|gb|AEF54479.1| DNA mismatch repair protein mutL [Marinomonas posidonica
IVIA-Po-181]
Length = 638
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 173/369 (46%), Gaps = 51/369 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ +KELLENSLDA ++ + + V+QGG++ ++I+DNG
Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAGASQLDIDVEQGGVRRIKIRDNGV 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL +++T GFRGEALASIS V+ + + ++ + A+
Sbjct: 63 GIVKDDLSLALSRHATSKIVTLDDLEAVNTLGFRGEALASISSVSRMHLTSQAENESEAW 122
Query: 126 RWCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMK 174
R D MA A+ S + + + EK + +E + L
Sbjct: 123 RVEAEGKD-MAAAIRPASHPQGTTIDVRDLFFNTPARRKFLRTEKTEFSHLEEVVKRLAL 181
Query: 175 SQYQPSEKIVER--------------------ACLLEIASLNNLELLSVEGTDDAFQLKV 214
S+Y+ ++ A LL + N L VE A L++
Sbjct: 182 SRYETGFRLSHNGKQVYDLRPVTDQLHAEHRLATLLGKKFIENTLTLDVE----AAGLRL 237
Query: 215 TGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
GWI FS + F N + + Q Y L G P L L +DP
Sbjct: 238 WGWIGLPTFSRSQADLQYFFVNGRVVKDKLVAHAVRQAYRDVLYNGRHPTFVLYLELDPS 297
Query: 268 NVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNTSRVFYTQS----TSIQVT 319
VDVNVHPTKHEV F L D + R+ + S+++ T S SI
Sbjct: 298 TVDVNVHPTKHEVRFRDGRLVHDFLFSRIHKAIADVRPESDSAPTGVTDSQENTVSIGAM 357
Query: 320 VKQGGLKLL 328
+Q L L+
Sbjct: 358 SEQSALPLV 366
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 111/196 (56%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S ++ + + V+QGG++ ++I+DNG GI K+D+ +
Sbjct: 20 VVERPASVVKELLENS-----LDAGASQLDIDVEQGGVRRIKIRDNGVGIVKDDLSLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +++T GFRGEALASIS V+ + + ++ + A+R +
Sbjct: 75 RHATSKIVTLDDLEAVNTLGFRGEALASISSVSRMHLTSQAENESEAWRVEAEGKDMAAA 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P + QGT I DLF+N P RRK L+ E++ + +VV R A+ GF L
Sbjct: 135 IRPASHPQGTTIDVRDLFFNTPARRKFLRTEKTEFSHLEEVVKRLALSRYETGFRLSHNG 194
Query: 468 ENLADIRTNVNSSHSE 483
+ + D+R + H+E
Sbjct: 195 KQVYDLRPVTDQLHAE 210
>gi|119474825|ref|ZP_01615178.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
gi|119451028|gb|EAW32261.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
Length = 617
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 166/324 (51%), Gaps = 49/324 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L + N+IAAGEV++RPA+ +KEL+ENS+DA ++ I + ++ GG+KL++++DNG
Sbjct: 3 QIKRLSPRLANQIAAGEVVERPASVIKELVENSMDAGASRIDIDIEAGGVKLMRVRDNGV 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +EDM + R TSK+ + +DL ++ T GFRGEALASIS V+ LTI++ T+ +
Sbjct: 63 GIEQEDMPLALSRHATSKIIELDDLENVRTLGFRGEALASISSVSRLTIMSNTEEQGAGW 122
Query: 126 RWCTYLADL------------MALALMEM-------SQYLQRDKEQIGDKEEKQWYRTVE 166
+ T D+ ++ + ++ ++L+ +K + EE +++
Sbjct: 123 KAQTEGRDMGVEVSPTPHLRGTSVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQSLS 182
Query: 167 ---------------HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ 211
H L P SQ + ++ A + A + N + E A
Sbjct: 183 RFDVGFYLNHNGRAIHALKPC-ASQLERERRV---ASVCGPAFMQNALHIDTE----AAG 234
Query: 212 LKVTGWITNVNFSTKKMTFL-LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
LK+ GW+ FS + F+N + R + Q Y L G P L L +
Sbjct: 235 LKLWGWVALPTFSRSQSDLQHFFVNGRVIRDKLVTHAVRQAYRDVLFHGRHPAFVLYLEV 294
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTI 288
+P VDVNVHPTKHEV F T+
Sbjct: 295 NPSIVDVNVHPTKHEVRFRDGRTV 318
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ I + ++ GG+KL++++DNG GI +EDM +
Sbjct: 20 VVERPASVIKELVENS-----MDAGASRIDIDIEAGGVKLMRVRDNGVGIEQEDMPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL ++ T GFRGEALASIS V+ LTI++ T+ ++A +
Sbjct: 75 RHATSKIIELDDLENVRTLGFRGEALASISSVSRLTIMSNTEEQGAGWKAQTEGRDMGVE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ P +GT + DLF+N P RRK L+ E+N + +VV R ++ VGF L
Sbjct: 135 VSPTPHLRGTSVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQSLSRFDVGFYL 190
>gi|401422940|ref|XP_003875957.1| putative mismatch repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492197|emb|CBZ27471.1| putative mismatch repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1373
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 108/168 (64%), Gaps = 22/168 (13%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+QV +GGL++LQ+ D+G+GI KED+ ++CER+ TSKL FEDL +++FGFRGEALAS
Sbjct: 43 VQVVAAEGGLEVLQVCDDGSGIHKEDLPLLCERYATSKLQTFEDLQRVTSFGFRGEALAS 102
Query: 376 ISHVAHLTIITK---------------------TKTSPCAYRASYIDSKLKDPIKPCAGN 414
IS+V+ +T+ T+ T + +R Y++ L + +PCAGN
Sbjct: 103 ISYVSRVTVTTRRRQACDESGDGASGAGSCSSSTAGAAVGWRCQYLNGALLEDPQPCAGN 162
Query: 415 QGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFT 462
GT I E LFYN RR++L+ SEE+ +IADVVSRYA+ P +GFT
Sbjct: 163 PGTTIRVEKLFYNALVRRRSLRA-SEEWGRIADVVSRYALAFPAIGFT 209
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 92/113 (81%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL + V+NRIAAGEV+QRP+ ALKELLEN++DA + +QV +GGL++LQ+ D+G+G
Sbjct: 4 IHKLTDDVINRIAAGEVVQRPSAALKELLENAIDAGCSRVQVVAAEGGLEVLQVCDDGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
I KED+ ++CER+ TSKL FEDL +++FGFRGEALASIS+V+ +T+ T+ +
Sbjct: 64 IHKEDLPLLCERYATSKLQTFEDLQRVTSFGFRGEALASISYVSRVTVTTRRR 116
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ G+ ++ + +K +FIN I++ I+ VYS L G PF L L +
Sbjct: 384 LVGYTSDPTLAQRKPYLCIFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTD 443
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
VDVNVHPTK EV L E+ I+ RV + +L + +R
Sbjct: 444 RVDVNVHPTKKEVCLLDEELIVSRVAEVCRGAVLEAAAAR 483
>gi|384085574|ref|ZP_09996749.1| DNA mismatch repair protein mutL [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 615
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 159/317 (50%), Gaps = 44/317 (13%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
PP++++LD T+ N+IAAGEV++RPA+ LKELLENSLDA++T I + ++ GG+ LL ++DN
Sbjct: 8 PPRVRRLDATLANQIAAGEVVERPASILKELLENSLDAQATRITIQLQGGGMDLLSVEDN 67
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
GTGI ED+ + ER TSK+ +EDL +I T GFRGEAL +I+ VA + I+++T +
Sbjct: 68 GTGILPEDLPLALERHATSKVASWEDLQAIQTMGFRGEALPAIASVARMEILSRTHDAGQ 127
Query: 124 AYRWCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTVEHTLVPLMKSQYQ 178
R + +++A E + Q+ D +++ R+ L + K Q
Sbjct: 128 GARLQVHGGEVLA---SEPAARAPGTTVQVADLFYNVPARRKFLRSAAAELTRIQKVLRQ 184
Query: 179 ----------------------PSEKIVERACLLEIASLNNLELLS----VEGTDDAFQL 212
P+ E AC +AS+ L+ +E +D L
Sbjct: 185 IALANFPVAFQLLQNRRSLVQYPAATDAE-ACSARVASILGEGFLANALYLEQSDQGISL 243
Query: 213 KVTGWITNVNFSTKKMTFLLFINN--PIK-----RMIEQVYSIYLPKGSFPFVYLSLCMD 265
+ GW+ ++ + F N P++ + Y L + P L L M
Sbjct: 244 R--GWLGLPTYNRARGDEQYFFVNGRPVRDPVLTHALRAAYQDVLFQDRHPLFVLYLDMP 301
Query: 266 PKNVDVNVHPTKHEVHF 282
+ VDVNVHP K EV F
Sbjct: 302 AEQVDVNVHPAKAEVRF 318
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 6/183 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L S Q+T I + ++ GG+ LL ++DNGTGI ED+ + E
Sbjct: 27 VVERPASILKELLENS-----LDAQATRITIQLQGGGMDLLSVEDNGTGILPEDLPLALE 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +EDL +I T GFRGEAL +I+ VA + I+++T + R ++
Sbjct: 82 RHATSKVASWEDLQAIQTMGFRGEALPAIASVARMEILSRTHDAGQGARLQVHGGEVLAS 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+P A GT + DLFYN+P RRK L+ + E +I V+ + A+ N V F L +
Sbjct: 142 -EPAARAPGTTVQVADLFYNVPARRKFLRSAAAELTRIQKVLRQIALANFPVAFQLLQNR 200
Query: 468 ENL 470
+L
Sbjct: 201 RSL 203
>gi|388259389|ref|ZP_10136562.1| DNA mismatch repair protein [Cellvibrio sp. BR]
gi|387936827|gb|EIK43385.1| DNA mismatch repair protein [Cellvibrio sp. BR]
Length = 628
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 159/336 (47%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK L + N+IAAGEV++RP++ +KELLENSLDA +T +++ +++GG+KL++++DNG
Sbjct: 3 KIKLLSPRLANQIAAGEVVERPSSVIKELLENSLDAGATRLEIDIEEGGIKLMRVRDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ + +DL +++T GFRGEALASIS VA L +I+ T +
Sbjct: 63 GIDKDDLPLALSRHATSKIYELDDLEAVATLGFRGEALASISSVARLALISSTNEESAGW 122
Query: 126 RWCTYLADL---MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEK 182
+ D+ ++ A ++ +++ RT K++Y E
Sbjct: 123 QVVAEGRDMETQLSPAPHPRGTTVEVRDLFFNTPARRKFLRT--------DKTEYTHLED 174
Query: 183 IVERACLLEIASLNNLE-----LLSVEGTDDAFQ-------------------------- 211
+V+R L NL + S D +
Sbjct: 175 VVKRLALSRFDVAFNLRHNGRAIYSWRAGDSQLEQERRVAQVCGPAFMENAVHLDIERNG 234
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 235 FRLWGWVALPTFSRSQADLQHFYVNGRAIRDKLVSHAVRQAYQDVLYHGRHPAFVLYLEL 294
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F + + + S L L
Sbjct: 295 DPSTVDVNVHPTKHEVRFRDNRNVHDFIYSSLHHAL 330
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T +++ +++GG+KL++++DNG GI K+D+ +
Sbjct: 20 VVERPSSVIKELLENS-----LDAGATRLEIDIEEGGIKLMRVRDNGGGIDKDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL +++T GFRGEALASIS VA L +I+ T ++ ++
Sbjct: 75 RHATSKIYELDDLEAVATLGFRGEALASISSVARLALISSTNEESAGWQVVAEGRDMETQ 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P +GT + DLF+N P RRK L+ EY + DVV R A+ V F L+
Sbjct: 135 LSPAPHPRGTTVEVRDLFFNTPARRKFLRTDKTEYTHLEDVVKRLALSRFDVAFNLRHNG 194
Query: 468 ENLADIRTN 476
+ R
Sbjct: 195 RAIYSWRAG 203
>gi|229588073|ref|YP_002870192.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25]
gi|259511148|sp|C3KDW1.1|MUTL_PSEFS RecName: Full=DNA mismatch repair protein MutL
gi|229359939|emb|CAY46793.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25]
Length = 633
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 171/341 (50%), Gaps = 49/341 (14%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 1 MNSGSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 ADQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGAGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L +DP VDVNVHPTKHEV F + + + L +TL
Sbjct: 293 LFFEVDPSVVDVNVHPTKHEVRFRDGRMVHDFLYGTLHRTL 333
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|358448119|ref|ZP_09158624.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
gi|357227547|gb|EHJ06007.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
Length = 636
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 160/323 (49%), Gaps = 57/323 (17%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ L + N+IAAGEV++RPA+ +KEL+EN+LDA + + V V+QGG+KL++++D+G
Sbjct: 2 PPIRLLSPRLANQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI ++D+ + R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T++ A
Sbjct: 62 SGIEEDDLPLALSRHATSKIASLDDLEAVASLGFRGEALASISSVSRLTLTSRTESQEAA 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVE 166
R + + EM + +G + EK + VE
Sbjct: 122 SR--------VEVEGREMDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVE 173
Query: 167 HTLVPLMKSQY----------------QPSEKIVER----ACLLEIASLNNLELLSVEGT 206
+ S++ +P+E ++R L ++N ++ E T
Sbjct: 174 ECVRRQALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQQFIDNAVVIDAEAT 233
Query: 207 DDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F+N + R + Q Y L P
Sbjct: 234 G----LRLWGWVALPTFSRSQADLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHPAFV 289
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 290 LYLEVDPATVDVNVHPTKHEVRF 312
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+ V V+QGG+KL++++D+G+GI ++D+ + R TSK+ +DL ++++ GFRGEALAS
Sbjct: 43 VDVEVEQGGVKLIRVRDDGSGIEEDDLPLALSRHATSKIASLDDLEAVASLGFRGEALAS 102
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T++ A R ++ I P A GT + DLF+N P RRK L
Sbjct: 103 ISSVSRLTLTSRTESQEAASRVEVEGREMDARISPAAHPVGTTVEVRDLFFNTPARRKFL 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYGNNI 493
+ E+N + + V R A+ GFTL+ + +R ++ E IG++ G
Sbjct: 163 RTEKTEFNHVEECVRRQALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQQF 221
>gi|254448141|ref|ZP_05061604.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
gi|198262267|gb|EDY86549.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
Length = 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 69/327 (21%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++L ++N+IAAGEVI+RPA+ +KELLENS+DA +T + + ++QGGLK ++I+DNG
Sbjct: 2 RIQRLPNKLINQIAAGEVIERPASVVKELLENSIDAGATEVHIDLEQGGLKRIRIRDNGC 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA- 124
G+ +E++ + ER TSK+ EDL S+ + GFRGEAL S++ V+HLT+ + CA
Sbjct: 62 GMNREEIPMALERHATSKIGSLEDLESVRSMGFRGEALPSMASVSHLTVTS------CAE 115
Query: 125 ---YRWCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTVEHTLVPLMKSQ 176
+ WC ++ M+ + + Q ++ D +++ RT +++
Sbjct: 116 GEEHGWC--VSPETEGGAMKPAAHSQGTTIELRDLFFNVPARRKFMRT--------ERTE 165
Query: 177 YQPSEKIVER------------------ACLLEIASLNNLEL----------------LS 202
Y+ +E +V+R C L A N E+ L
Sbjct: 166 YKHTETLVKRIALGAPYLGLTLRHNGKVTCQLRPAG-NRAEMEKRVAELCGSAFMEQCLY 224
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSF 255
VE +A LK+ GW+ FS + F +N I R ++Q Y L G
Sbjct: 225 VE--HEAAGLKLQGWVGLPTFSRSQADLQYFYVNGRIVRDKLVTHAVKQGYQDVLYHGRH 282
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHF 282
P L L +DPK VDVN HPTK+EV F
Sbjct: 283 PAYVLHLELDPKLVDVNAHPTKYEVRF 309
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S +T + + ++QGGLK ++I+DNG G+ +E++ + E
Sbjct: 19 VIERPASVVKELLENS-----IDAGATEVHIDLEQGGLKRIRIRDNGCGMNREEIPMALE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL S+ + GFRGEAL S++ V+HLT+ + + + S
Sbjct: 74 RHATSKIGSLEDLESVRSMGFRGEALPSMASVSHLTVTSCAEGEEHGWCVS--PETEGGA 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A +QGT I DLF+N+P RRK ++ EY +V R A+ P++G TL+
Sbjct: 132 MKPAAHSQGTTIELRDLFFNVPARRKFMRTERTEYKHTETLVKRIALGAPYLGLTLRHNG 191
Query: 468 ENLADIRTNVNSSHSE 483
+ +R N + E
Sbjct: 192 KVTCQLRPAGNRAEME 207
>gi|157870217|ref|XP_001683659.1| putative mismatch repair protein [Leishmania major strain Friedlin]
gi|68126725|emb|CAJ05022.1| putative mismatch repair protein [Leishmania major strain Friedlin]
Length = 1370
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 109/168 (64%), Gaps = 22/168 (13%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+QV +GGL++LQ+ D+G+GI KED+ ++CER+ TSKL FEDL+ +++FGFRGEALAS
Sbjct: 43 VQVVAAEGGLEVLQVCDDGSGIHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALAS 102
Query: 376 ISHVAHLTIITK---------------------TKTSPCAYRASYIDSKLKDPIKPCAGN 414
IS+V+ +T+ T+ T + A+R Y++ L + +PCAGN
Sbjct: 103 ISYVSRMTVTTRRRQTCDESGNGASGAGSCSFSTAGAAVAWRCQYLNGTLLEDPQPCAGN 162
Query: 415 QGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFT 462
GT + E LFYN RR++L+ SEE+ +I DVVSRYA+ P +GFT
Sbjct: 163 PGTTVRVEKLFYNALVRRRSLRA-SEEWGRIVDVVSRYALAFPAIGFT 209
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 93/113 (82%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL + V+NRIAAGEV+QRP+ ALKELLEN++DA + +QV +GGL++LQ+ D+G+G
Sbjct: 4 IHKLTDDVINRIAAGEVVQRPSAALKELLENAIDAGCSRVQVVAAEGGLEVLQVCDDGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
I KED+ ++CER+ TSKL FEDL+ +++FGFRGEALASIS+V+ +T+ T+ +
Sbjct: 64 IHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRMTVTTRRR 116
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ G+ ++ + +K +FIN I++ I+ VYS L G PF L L +
Sbjct: 384 LVGYTSDPTLAQRKPYLCVFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTD 443
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
VDVNVHPTK EV L E+ I+ RV + +L + +R
Sbjct: 444 RVDVNVHPTKKEVCLLDEELIVSRVAEVCRGAVLEAAAAR 483
>gi|73669014|ref|YP_305029.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
gi|72396176|gb|AAZ70449.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
Length = 692
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 175/330 (53%), Gaps = 41/330 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ +N+IAAGEVI+RPA+ +KEL++NS+DA +T I++ V++GG + + ++DNG
Sbjct: 16 KIRLLDKDTINKIAAGEVIERPASVVKELIDNSIDAGATDIRIEVEKGGKRSILVRDNGC 75
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G+ +ED + ++ TSKLT+ EDLN+IST GFRGEAL+SI+ VA + I+T+
Sbjct: 76 GMDREDALLAYKKHATSKLTRIEDLNTISTMGFRGEALSSITAVAKVEILTRPPEEITGT 135
Query: 126 RWCTYLADLMALA------------------LMEMSQYLQRDKEQIGDKEEK--QWYRTV 165
R + ++ + + +YL+ D+ ++ + Q
Sbjct: 136 RIVIHGGKVLETSAAGTTPGTSVNVKDLFYNIPARQKYLKSDRTELAHITDTVMQLALAN 195
Query: 166 EHTLVPLMKSQYQPSEKIVERACLLE-IASLNNL-------ELLSVEGTDDAFQLKVTGW 217
H L+ S+ +P ++ A E S+ NL +L +E + F+ + G+
Sbjct: 196 PHISFTLL-SEEKP---VIRNAGSSESFKSIVNLLGPDTARSMLPLEYRTEDFE--IFGY 249
Query: 218 ITNVNFSTKKM-TFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
I+ + ++ LF+N I + I + Y +PK +P LSL ++P VD
Sbjct: 250 ISKPETTRRESDQIFLFVNTRPVTSRSINKAIREGYYTKIPKERYPVAVLSLIVNPGEVD 309
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E + + V S +EK L
Sbjct: 310 VNVHPRKAEVRFSREKELGDAVTSAIEKVL 339
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 16/226 (7%)
Query: 278 HEVHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQ 329
+++ L +DTI IER S++++ + S +T I++ V++GG + +
Sbjct: 15 NKIRLLDKDTINKIAAGEVIERPASVVKELIDNS-----IDAGATDIRIEVEKGGKRSIL 69
Query: 330 IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 389
++DNG G+ +ED + ++ TSKLT+ EDLN+IST GFRGEAL+SI+ VA + I+T+
Sbjct: 70 VRDNGCGMDREDALLAYKKHATSKLTRIEDLNTISTMGFRGEALSSITAVAKVEILTRPP 129
Query: 390 TSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVV 449
R K+ + GT + +DLFYNIP R+K LK E I D V
Sbjct: 130 EEITGTRIVIHGGKVLE-TSAAGTTPGTSVNVKDLFYNIPARQKYLKSDRTELAHITDTV 188
Query: 450 SRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISR 495
+ A+ NPH+ FTL + + + IR +S + I N+ G + +R
Sbjct: 189 MQLALANPHISFTLLSEEKPV--IRNAGSSESFKSIVNLLGPDTAR 232
>gi|87122647|ref|ZP_01078524.1| DNA mismatch repair protein [Marinomonas sp. MED121]
gi|86162105|gb|EAQ63393.1| DNA mismatch repair protein [Marinomonas sp. MED121]
Length = 637
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 153/331 (46%), Gaps = 75/331 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ +KELLENSLDA +T + V V+QGG++ ++I+DNG
Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAGATQLDVEVEQGGVRQIKIRDNGA 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL ++ + GFRGEALASIS V+ L + +K K A+
Sbjct: 63 GIVKDDLPLALSRHATSKIHTLDDLEAVQSLGFRGEALASISSVSRLLLTSKAKGEQDAW 122
Query: 126 R--------------------WCTYLADL---------------------------MALA 138
R C + DL +AL+
Sbjct: 123 RVEAEGKDMGANVKPASHPEGTCIEVRDLFFNTPARRKFLRTDKTEFNHLSEVVKRLALS 182
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+++ L D +Q+ D EH L L+ + V+ A +++
Sbjct: 183 RYDVAFRLSHDGKQVYDLRAVTDQMHAEHRLATLLGKSF------VQNALAIDV------ 230
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLP 251
+A L++ GWI FS + F N + + Q Y L
Sbjct: 231 ---------EAAGLRLWGWIGLPTFSRSQADLQYFFVNGRVVKDKLVAHAVRQAYRDVLY 281
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
G P L L +DP VDVNVHPTKHEV F
Sbjct: 282 NGRHPTFVLYLELDPATVDVNVHPTKHEVRF 312
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T + V V+QGG++ ++I+DNG GI K+D+ +
Sbjct: 20 VVERPASVVKELLENS-----LDAGATQLDVEVEQGGVRQIKIRDNGAGIVKDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL ++ + GFRGEALASIS V+ L + +K K A+R +
Sbjct: 75 RHATSKIHTLDDLEAVQSLGFRGEALASISSVSRLLLTSKAKGEQDAWRVEAEGKDMGAN 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP + +GT I DLF+N P RRK L+ E+N +++VV R A+ V F L
Sbjct: 135 VKPASHPEGTCIEVRDLFFNTPARRKFLRTDKTEFNHLSEVVKRLALSRYDVAFRLSHDG 194
Query: 468 ENLADIRTNVNSSHSE 483
+ + D+R + H+E
Sbjct: 195 KQVYDLRAVTDQMHAE 210
>gi|429332815|ref|ZP_19213527.1| DNA mismatch repair protein [Pseudomonas putida CSV86]
gi|428762571|gb|EKX84774.1| DNA mismatch repair protein [Pseudomonas putida CSV86]
Length = 627
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL++
Sbjct: 1 MSSASRIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVEVEQGGVKLLKV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGIASDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 AQQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEF 172
Query: 178 QPSEKIVERACLLEI-----ASLNNLELLSVEGTDDAFQ--------------------- 211
++++ R L N +LS+ D
Sbjct: 173 DHLQEVIRRLALARFDVGFHLRHNGKSILSLHEAPDELSRARRVGAICGPGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLELDPTGVDVNVHPTKHEVRF 315
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 116/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIDVEVEQGGVKLLKVRDDGSGIASDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAQQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIRTNVNS-SHSEVIGNIYG 490
+++ + + S + +G I G
Sbjct: 198 KSILSLHEAPDELSRARRVGAICG 221
>gi|440740148|ref|ZP_20919643.1| DNA mismatch repair protein [Pseudomonas fluorescens BRIP34879]
gi|447919673|ref|YP_007400241.1| DNA mismatch repair protein [Pseudomonas poae RE*1-1-14]
gi|440377833|gb|ELQ14468.1| DNA mismatch repair protein [Pseudomonas fluorescens BRIP34879]
gi|445203536|gb|AGE28745.1| DNA mismatch repair protein [Pseudomonas poae RE*1-1-14]
Length = 633
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 164/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 1 MNSGSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGAGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPSVVDVNVHPTKHEVRF 315
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|386022336|ref|YP_005940361.1| DNA mismatch repair protein [Pseudomonas stutzeri DSM 4166]
gi|327482309|gb|AEA85619.1| DNA mismatch repair protein [Pseudomonas stutzeri DSM 4166]
Length = 625
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M Q P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I+V V+QGG+KLL++
Sbjct: 1 MTQAPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGAGRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDD--------------AF-------- 210
+++++R L ++A N +L++ +D AF
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKGVLALHQANDDSARARRVAAVCGPAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAGRIEVDVEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 EN-LADIRTNVNSSHSEVIGNIYG 490
+ LA + N +S+ + + + G
Sbjct: 198 KGVLALHQANDDSARARRVAAVCG 221
>gi|334136568|ref|ZP_08510029.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
gi|333605901|gb|EGL17254.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
Length = 788
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 171/326 (52%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LDE + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I V ++GGL+L+++ DNG+
Sbjct: 3 KIRLLDEHIANQIAAGEVVERPASVVKELVENSIDAGSSRIDVVAEEGGLQLIRVTDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED ++ R TSK+ +DL SI T GFRGEAL SI+ V+ +T T S
Sbjct: 63 GIESEDCELAFYRHATSKIQSGKDLFSIRTLGFRGEALPSIAAVSKTEFVTSTDGSGLGR 122
Query: 126 RWCTYLADLMA-----------LALMEMS-------QYLQRDKEQIGDKEEKQWYRTVEH 167
+ D++ +++ E+ +Y++ + ++G + + + H
Sbjct: 123 KLAVEGGDVVTQEETSARKGTDISVKELFYNTPARLKYMKTIQTELGHISDYMYRLALAH 182
Query: 168 TLVPL-MKSQYQPSEKIVERACLLEI-----ASLNNLELLSVEGTDDAFQLKVTGWITNV 221
+ +K + + LL++ S ++++V G ++ K++G+I+
Sbjct: 183 PEIAFTLKHNGNSLLQTLGGGDLLQVIAGVYGSAVGKQMIAVGG--ESLDYKISGYISRP 240
Query: 222 NFSTKKMTFLLFINN-------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+ + + + N ++ I + LP FP V L + MDP VDVNVH
Sbjct: 241 ELNRANRSAMSIMVNGRYVRSFAVQHAIMNGFHTLLPINRFPVVVLHIEMDPSLVDVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
P+K EV F E +++ ++ M+++ L
Sbjct: 301 PSKLEVRFSKEPELVKMIEDMIKEAL 326
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I V ++GGL+L+++ DNG+GI ED ++ R TSK+ +DL SI T GFRGEA
Sbjct: 40 SSRIDVVAEEGGLQLIRVTDNGSGIESEDCELAFYRHATSKIQSGKDLFSIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +T T S + + + + A +GT I ++LFYN P R
Sbjct: 100 LPSIAAVSKTEFVTSTDGSGLGRKLAVEGGDVVTQEETSA-RKGTDISVKELFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E I+D + R A+ +P + FTLK +L ++T +VI +YG+
Sbjct: 159 KYMKTIQTELGHISDYMYRLALAHPEIAFTLKHNGNSL--LQTLGGGDLLQVIAGVYGSA 216
Query: 493 ISRRV 497
+ +++
Sbjct: 217 VGKQM 221
>gi|401401012|ref|XP_003880911.1| putative DNA mismatch repair protein [Neospora caninum Liverpool]
gi|325115323|emb|CBZ50878.1| putative DNA mismatch repair protein [Neospora caninum Liverpool]
Length = 1141
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I+KLD +VV RIAAGEV+ RP++ALKELLEN +DA+S+SI VTV+ GG KLL + D+G
Sbjct: 61 PRIRKLDLSVVQRIAAGEVVLRPSSALKELLENCMDARSSSISVTVQNGGFKLLAVSDDG 120
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI ED+ I+C RFTTSK+ DL + TFGFRGEALAS+S V H+ + T+ + P
Sbjct: 121 CGIYPEDLPILCHRFTTSKMKSLADLRCMRTFGFRGEALASLSVVGHVEVTTRIASLPHG 180
Query: 125 YRWCTY 130
YR C+Y
Sbjct: 181 YR-CSY 185
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 19/185 (10%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+S+SI VTV+ GG KLL + D+G GI ED+ I+C RFTTSK+ DL + TFGFRG
Sbjct: 97 ARSSSISVTVQNGGFKLLAVSDDGCGIYPEDLPILCHRFTTSKMKSLADLRCMRTFGFRG 156
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSK-------------------LKDPIKPC 411
EALAS+S V H+ + T+ + P YR SY + + +
Sbjct: 157 EALASLSVVGHVEVTTRIASLPHGYRCSYDKGEPVLSSSVPASHSVSSGSSPVPAGVSVA 216
Query: 412 AGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLA 471
A ++GT + LF+ P RRK L P EEY+K +V +RYA+ NPH+ FT K+Q++ A
Sbjct: 217 ARSRGTTLRVSQLFHAFPERRKMLASPQEEYSKCLEVCTRYAIDNPHIKFTCKRQDKTQA 276
Query: 472 DIRTN 476
D+ T+
Sbjct: 277 DLSTS 281
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLP 251
E+ E +A ++ V G+ + V+ K TF+LFIN+ +++ IE VY +P
Sbjct: 513 EVKQAEEQRNACKVSVWGYASRVSAGAKPPGTFILFINSRLVDAPALRKSIEGVYQELMP 572
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
+G +VYLS + VDVNVHPTK V L+ED + + + L +S++F
Sbjct: 573 RGLKAWVYLSFSLPAWLVDVNVHPTKQRVQLLYEDFVAAHLSRHFRERLGSQTSSQIFDV 632
Query: 312 Q 312
Q
Sbjct: 633 Q 633
>gi|431925875|ref|YP_007238909.1| DNA mismatch repair protein MutL [Pseudomonas stutzeri RCH2]
gi|431824162|gb|AGA85279.1| DNA mismatch repair protein MutL [Pseudomonas stutzeri RCH2]
Length = 625
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ ++ I+V V+QGG+KLL++
Sbjct: 1 MTDTPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGASRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ + +DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKAVLALHQASDDASRARRVAAVCGSAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 119/208 (57%), Gaps = 12/208 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ L L S SR I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDSGASR--------IEVDVEQGGVKLLRVRDDGCGIPPDDLPL 74
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 75 ALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTADASEAWQVETEGREM 134
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ ++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 135 EARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLR 194
Query: 465 KQNEN-LADIRTNVNSSHSEVIGNIYGN 491
+ LA + + ++S + + + G+
Sbjct: 195 HNGKAVLALHQASDDASRARRVAAVCGS 222
>gi|146283982|ref|YP_001174135.1| DNA mismatch repair protein [Pseudomonas stutzeri A1501]
gi|167017345|sp|A4VQP2.1|MUTL_PSEU5 RecName: Full=DNA mismatch repair protein MutL
gi|145572187|gb|ABP81293.1| DNA mismatch repair protein MutL [Pseudomonas stutzeri A1501]
Length = 625
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M Q P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I+V V+QGG+KLL++
Sbjct: 1 MTQAPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGAGRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDD--------------AF-------- 210
+++++R L ++A N +L++ +D AF
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKGVLALHQANDDSARARRVAAVCGPAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAGRIEVDVEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 EN-LADIRTNVNSSHSEVIGNIYG 490
+ LA + N +S+ + + + G
Sbjct: 198 KGVLALHQANDDSARARRVAAVCG 221
>gi|374296086|ref|YP_005046277.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
gi|359825580|gb|AEV68353.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
Length = 729
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 169/343 (49%), Gaps = 53/343 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI LDE N+IAAGEV++RPA+ +KEL+ENS+DA S++I + + GG+ ++++ DNG+
Sbjct: 3 KIVILDENTANQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGISMIKVVDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI ++D++I ER +TSK+ + +DL SI T GFRGEALASI+ V+ + + T+ K P
Sbjct: 63 GIDEDDVEIAFERHSTSKIRKADDLESIYTLGFRGEALASIASVSLVELTTRVKEKPYGK 122
Query: 123 ----------------CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
C + DL ++L++D + G V
Sbjct: 123 YIKIQGGLVKEVRQTGCPVGTTFIVRDLFYNTPARF-KFLKKDTTEAG---------YVS 172
Query: 167 HTLVPLMKSQYQPSEKIV-ERACLLEIASLNNL--------------ELLSVEGTDDAFQ 211
+ + S K+V R C++ N+L E+L V D+ +
Sbjct: 173 DIVNRIALGNPHISIKLVNNRNCVIHTPGNNDLLSTIFSLYGKETAKEVLEVRYKDE--K 230
Query: 212 LKVTGWI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+++ G+ T N+ + + N I I++ Y YL K F FV L + +
Sbjct: 231 VEIFGYAGKPEIARTTRNYQSIYINGRYIRNKTIFSAIDEAYKTYLMKNKFAFVVLQIKI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
+P VDVNVHPTK EV F E TI V + LL + R
Sbjct: 291 NPIFVDVNVHPTKMEVRFSDEQTIFRAVYHAINNALLSKSLIR 333
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S++I + + GG+ ++++ DNG+GI ++D++I ER +TSK+ + +DL SI T GFRGEA
Sbjct: 40 SSNISIEINNGGISMIKVVDNGSGIDEDDVEIAFERHSTSKIRKADDLESIYTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ + + T+ K P + I L ++ GT I DLFYN P R
Sbjct: 100 LASIASVSLVELTTRVKEKPYG-KYIKIQGGLVKEVRQTGCPVGTTFIVRDLFYNTPARF 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK+ + E ++D+V+R A+ NPH+ L N N I T N+ I ++YG
Sbjct: 159 KFLKKDTTEAGYVSDIVNRIALGNPHISIKL-VNNRNCV-IHTPGNNDLLSTIFSLYGKE 216
Query: 493 ISRRV 497
++ V
Sbjct: 217 TAKEV 221
>gi|254427517|ref|ZP_05041224.1| DNA mismatch repair protein MutL [Alcanivorax sp. DG881]
gi|196193686|gb|EDX88645.1| DNA mismatch repair protein MutL [Alcanivorax sp. DG881]
Length = 622
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 166/333 (49%), Gaps = 39/333 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD + N+IAAGEV++RPA+ LKELLEN+LDA S SI V V+QGG+KL++++DNG
Sbjct: 3 KIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGSESISVDVEQGGVKLVRVRDNGN 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + R TSK+ +DL +I T GFRGEALA+IS V+ L++ + + +
Sbjct: 63 GIERDDLPLALSRHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEAEGW 122
Query: 126 RWCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMK 174
+ D MA + + + + EK + +E +
Sbjct: 123 QVTVEGRD-MAPTVAPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIAL 181
Query: 175 SQYQPS------EKIVER--ACL---LEIASLNNL-------ELLSVEGTDDAFQLKVTG 216
S++ + +K++ + A L L A + L + ++V+ D +L G
Sbjct: 182 SEFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFMEQAVAVDVERDGLRLH--G 239
Query: 217 WITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ FS + F N + + Q Y+ L G P L L +DP V
Sbjct: 240 WMGLPTFSRSQADLQYFYVNGRVIRDKVVSHAVRQAYADVLYHGRHPAYVLFLELDPAMV 299
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
DVNVHPTKHEV F + + + S L + + G
Sbjct: 300 DVNVHPTKHEVRFREQRMVHGFLYSSLHRAIAG 332
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L S SI V V+QGG+KL++++DNG GI ++D+ +
Sbjct: 20 VVERPASVLKELL-----ENALDAGSESISVDVEQGGVKLVRVRDNGNGIERDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I T GFRGEALA+IS V+ L++ + + ++ + +
Sbjct: 75 RHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEAEGWQVTVEGRDMAPT 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ P +GT + DLF+N P RR+ L+ E+N + +V R A+ + F L
Sbjct: 135 VAPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALSEFNTAFRL 190
>gi|421618275|ref|ZP_16059253.1| DNA mismatch repair protein [Pseudomonas stutzeri KOS6]
gi|409779829|gb|EKN59480.1| DNA mismatch repair protein [Pseudomonas stutzeri KOS6]
Length = 627
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 164/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ ++ I+V V+QGG+KLL++
Sbjct: 1 MSGTPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGASRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
++++ R L ++A N +L++ + +DDA +
Sbjct: 173 DHLQEVIRRLALARFDVAFHLRHNGKGVLALHQASDDAARARRVGAVCGPAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 119/207 (57%), Gaps = 12/207 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ L L S SR I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDSGASR--------IEVDVEQGGVKLLRVRDDGCGIPPDDLPL 74
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 75 ALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAWQVETEGREM 134
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ ++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 135 EARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIRRLALARFDVAFHLR 194
Query: 465 KQNEN-LADIRTNVNSSHSEVIGNIYG 490
+ LA + + +++ + +G + G
Sbjct: 195 HNGKGVLALHQASDDAARARRVGAVCG 221
>gi|339495711|ref|YP_004716004.1| DNA mismatch repair protein [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803083|gb|AEJ06915.1| DNA mismatch repair protein [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 625
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M Q P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I+V V+QGG+KLL++
Sbjct: 1 MTQAPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGAGRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDD--------------AF-------- 210
+++++R L ++A N +L++ +D AF
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKGVLALHQANDDSARARRVAAVCGPAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRTQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAGRIEVDVEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 EN-LADIRTNVNSSHSEVIGNIYG 490
+ LA + N +S+ + + + G
Sbjct: 198 KGVLALHQANDDSARARRVAAVCG 221
>gi|421142866|ref|ZP_15602832.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
gi|404506049|gb|EKA20053.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
Length = 632
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGARRIDVDVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 66 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 178 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGAGFLEQALPIEIERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L +
Sbjct: 238 LRLWGWVGLPTFSRSQADMQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPSVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GARRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|395498594|ref|ZP_10430173.1| DNA mismatch repair protein [Pseudomonas sp. PAMC 25886]
Length = 632
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 1 MSNTSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 ADQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGGGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPSVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|395799671|ref|ZP_10478951.1| DNA mismatch repair protein [Pseudomonas sp. Ag1]
gi|395336176|gb|EJF68037.1| DNA mismatch repair protein [Pseudomonas sp. Ag1]
Length = 632
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGARRIDVDVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 66 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 178 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGAGFLEQALPIEIERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L +
Sbjct: 238 LRLWGWVGLPTFSRSQADMQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPSVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GARRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|304440468|ref|ZP_07400357.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371220|gb|EFM24837.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 630
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 180/332 (54%), Gaps = 36/332 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LDE V++IAAGE+I+ PA+ +KELLENS+DA + +I V VK G L++ D+G+G
Sbjct: 2 INILDEYTVSKIAAGEIIENPASIVKELLENSIDAGAKNITVEVKDGAANYLRVSDDGSG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ R TSKL +DL +I + GFRGEALASIS+V+ LT ITKTK+ A
Sbjct: 62 IEKDDLKYAFLRHATSKLKTSDDLFNIHSLGFRGEALASISNVSKLTCITKTKSDLTATV 121
Query: 127 WCTYLADLMA---LALMEMSQYLQRD--------KEQIGDKEEKQWYRTVEHTLVPLMKS 175
++ + +A E + ++ RD K+ + K E + + + L S
Sbjct: 122 VEVENGEIKSEKNIASNEGTTFIIRDVFYNTPVRKKYL--KSENLEFSYIFDVVEKLSLS 179
Query: 176 QYQPSEKIVERACLLEIASLNNLELL----SVEGTDDAFQL----------KVTGWITN- 220
+ + S +V R + ++S+ N L SV G+D L K+ G+I+N
Sbjct: 180 RSEISFTLV-RDGKVVVSSIANENLKNHIHSVLGSDITRNLVEIEHEEEGYKIKGFISNN 238
Query: 221 -VNFSTKKMTFLL----FINN-PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+ ST+ +L F+ N I R IE+ Y +P FP L + +DPK VDVN+H
Sbjct: 239 MLYRSTRNHEYLFVNGRFVKNLEIARAIEKSYKSLIPLNRFPVYLLYIEIDPKLVDVNIH 298
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
P KHE+ +E+ +IE + ML + L NTS
Sbjct: 299 PKKHEIKLSNENRLIE-ILDMLVREKLYKNTS 329
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ +I V VK G L++ D+G+GI K+D+ R TSKL +DL +I + GFRGEA
Sbjct: 38 AKNITVEVKDGAANYLRVSDDGSGIEKDDLKYAFLRHATSKLKTSDDLFNIHSLGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS+V+ LT ITKTK+ A + ++K K A N+GT I D+FYN P R+
Sbjct: 98 LASISNVSKLTCITKTKSDLTATVVEVENGEIKSE-KNIASNEGTTFIIRDVFYNTPVRK 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK + E++ I DVV + ++ + FTL + + + N N + I ++ G++
Sbjct: 157 KYLKSENLEFSYIFDVVEKLSLSRSEISFTLVRDGKVVVSSIANENLKNH--IHSVLGSD 214
Query: 493 ISRRV 497
I+R +
Sbjct: 215 ITRNL 219
>gi|312958650|ref|ZP_07773170.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6]
gi|311287193|gb|EFQ65754.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6]
Length = 640
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 164/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+D +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 6 LDSGSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRV 65
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 66 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRN 125
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 126 AEQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 177
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E D+A +
Sbjct: 178 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDEAARARRVSAICGAGFLEQALPIE 237
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 238 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 297
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 298 LFFEVDPAVVDVNVHPTKHEVRF 320
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 28 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRNAEQAWQVETEGRDMAPR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENLADIRTNVNSSHSEV 484
+ + +++ +H E
Sbjct: 203 KTI----LSLHEAHDEA 215
>gi|419955626|ref|ZP_14471751.1| DNA mismatch repair protein [Pseudomonas stutzeri TS44]
gi|387967539|gb|EIK51839.1| DNA mismatch repair protein [Pseudomonas stutzeri TS44]
Length = 625
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 49/319 (15%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ +T I+V V+QGG+KLL+++D+G
Sbjct: 5 PRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGATRIEVDVEQGGVKLLRVRDDG 64
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A
Sbjct: 65 CGIPADDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTVEAAEA 124
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSE 181
++ T EM +Q +G E + ++ T + K+++ +
Sbjct: 125 WQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQ 176
Query: 182 KIVERACL--LEIA---SLNNLELLSV-EGTDD-------------AF------------ 210
++++R L ++A N +L++ + +DD AF
Sbjct: 177 EVIKRLALARFDVAFHLRHNGKAVLALHQASDDAARARRVAAVCGAAFLEQALPVEIERN 236
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLC 263
L++ GW+ FS + F N + + Q Y L G P L L
Sbjct: 237 GLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLD 296
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHPTKHEV F
Sbjct: 297 VDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S +T I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GATRIEVDVEQGGVKLLRVRDDGCGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTVEAAEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLR 194
>gi|418293809|ref|ZP_12905711.1| DNA mismatch repair protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065194|gb|EHY77937.1| DNA mismatch repair protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 625
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ +T I V ++QGG+KLL++
Sbjct: 1 MTGAPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGATRIDVDIEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ + DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKAVLALHQAGDDASRARRVAAVCGSAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S +T I V ++QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GATRIDVDIEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTADASEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 EN-LADIRTNVNSSHSEVIGNIYGN 491
+ LA + ++S + + + G+
Sbjct: 198 KAVLALHQAGDDASRARRVAAVCGS 222
>gi|269118665|ref|YP_003306842.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386]
gi|268612543|gb|ACZ06911.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386]
Length = 621
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 176/324 (54%), Gaps = 45/324 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LDE+V N IAAGEV++ PA+ +KELLENSLDA + S+++ V GG K ++I DNG+
Sbjct: 3 KIKILDESVSNIIAAGEVVENPASMIKELLENSLDAGADSVKIEVFNGG-KDVKISDNGS 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G+ K DM + ER TSK++ +D+ ++ T+GFRGEALASIS V+ +TI TKTK S Y
Sbjct: 62 GMEKNDMMLSIERHATSKISTKDDIFNLMTYGFRGEALASISSVSKMTISTKTKESNVGY 121
Query: 126 RWCTYLADLMALALMEMS------------------QYLQRDK---EQIGD---KEEKQW 161
+ Y + + + + ++L+++ +I D KE
Sbjct: 122 KLTAYAGSIRNVEEISRNNGTEIEIRDLFYNTPARKKFLRKESTEYNKIRDIVLKEALVN 181
Query: 162 YRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNV 221
Y T TL+ K + S K +E +LE+ N L+ L F+ G++ +V
Sbjct: 182 YDTA-FTLIFDDKPSIKTSGKGIEN-TILELFGKNVLKNLK------KFE---HGYLGSV 230
Query: 222 NF--STKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
S+K F ++N N I+R + Y L KG +PF + L DPK +DVNV
Sbjct: 231 EILRSSKDYIF-TYVNKRYVKSNTIERAVLDGYYTKLMKGKYPFAVIFLNTDPKEIDVNV 289
Query: 274 HPTKHEVHFLHEDTIIERVQSMLE 297
HP+K V F ++ I +++S ++
Sbjct: 290 HPSKKIVKFSNDKIIYTQIKSAMD 313
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 16/216 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++E SM+++ L S + S+++ V GG K ++I DNG+G+ K DM + E
Sbjct: 20 VVENPASMIKELLENS-----LDAGADSVKIEVFNGG-KDVKISDNGSGMEKNDMMLSIE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +D+ ++ T+GFRGEALASIS V+ +TI TKTK S Y+ + +++
Sbjct: 74 RHATSKISTKDDIFNLMTYGFRGEALASISSVSKMTISTKTKESNVGYKLTAYAGSIRN- 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ + N GT+I DLFYN P R+K L++ S EYNKI D+V + A+ N FTL
Sbjct: 133 VEEISRNNGTEIEIRDLFYNTPARKKFLRKESTEYNKIRDIVLKEALVNYDTAFTL---- 188
Query: 468 ENLADIRTNVNSSHSEV---IGNIYGNNISRRVRRF 500
+ D + ++ +S + I ++G N+ + +++F
Sbjct: 189 --IFDDKPSIKTSGKGIENTILELFGKNVLKNLKKF 222
>gi|395647925|ref|ZP_10435775.1| DNA mismatch repair protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 632
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL++
Sbjct: 1 MNSGSRIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGARRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T++
Sbjct: 61 RDDGSGISADDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRS 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEANDDAARARRVAAVCGAGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPSVVDVNVHPTKHEVRF 315
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSIDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+++ A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|290978294|ref|XP_002671871.1| predicted protein [Naegleria gruberi]
gi|284085443|gb|EFC39127.1| predicted protein [Naegleria gruberi]
Length = 662
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
Query: 1 MDQPP---KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKL 57
+ QPP KIK L E V+N+IAAGEVI P+NA+KELLENSLDA + SI + GLK
Sbjct: 12 ISQPPVDGKIKPLSEEVINKIAAGEVIAAPSNAIKELLENSLDAGADSITIEFGDAGLKY 71
Query: 58 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
QI DNG GI +D++IVCER TTSKL+ FEDL SI+TFGFRGEAL+S+S AH+TI +K
Sbjct: 72 FQITDNGCGIGAKDLEIVCERHTTSKLSSFEDLRSIATFGFRGEALSSVSTCAHVTITSK 131
Query: 118 TKTSPCAYRWCTY 130
T+ A + TY
Sbjct: 132 TEQQSTAL-FATY 143
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 115/183 (62%), Gaps = 1/183 (0%)
Query: 315 SIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALA 374
SI + GLK QI DNG GI +D++IVCER TTSKL+ FEDL SI+TFGFRGEAL+
Sbjct: 59 SITIEFGDAGLKYFQITDNGCGIGAKDLEIVCERHTTSKLSSFEDLRSIATFGFRGEALS 118
Query: 375 SISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA 434
S+S AH+TI +KT+ A A+Y D KL P+K +G +GT I AE+LF++ TRR++
Sbjct: 119 SVSTCAHVTITSKTEQQSTALFATYRDGKLTGPMKKRSGARGTIIRAENLFFDNKTRRES 178
Query: 435 LKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ +E I +V+ YA+ N V TLKKQ E + T ++ + I ++G I
Sbjct: 179 VNLNTEP-KAIQKIVTAYALFNTGVSITLKKQGETKPIVHTLTKNNVRQNIKALFGPKIE 237
Query: 495 RRV 497
+ +
Sbjct: 238 KEI 240
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 34/111 (30%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFV 258
E++ + ++ +L + TNVN+S+K+ F LFINN
Sbjct: 239 EIIEADINNEKIELTGKMYFTNVNYSSKEKAFTLFINN---------------------- 276
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VN+HPTK EV L ED IIE V+ +L K LLGSN+SR F
Sbjct: 277 ------------VNMHPTKKEVAVLDEDRIIEEVKDVLRKKLLGSNSSRTF 315
>gi|294947342|ref|XP_002785340.1| dna mismatch repair protein mlh1, putative [Perkinsus marinus ATCC
50983]
gi|239899113|gb|EER17136.1| dna mismatch repair protein mlh1, putative [Perkinsus marinus ATCC
50983]
Length = 793
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 330 IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 389
+ DNG GI++ED+ I+C+RFTTSKL F+DL SI T GFRGEALASISHVA LT+ T T+
Sbjct: 494 VSDNGCGIQREDLPILCKRFTTSKLRSFDDLQSIMTHGFRGEALASISHVARLTVTTMTE 553
Query: 390 TSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQP-SEEYNKIADV 448
S YR Y+D + D +P A GT I DLFYN+PTRR++L SEEY +I D+
Sbjct: 554 DSQVGYRCEYMDGEAVDEAQPTAATPGTTIHFTDLFYNLPTRRRSLMNTQSEEYARIVDL 613
Query: 449 VSRYAVHNPHVGFTLKKQNENLADIRTNV 477
VSR+A + FT + ADI + V
Sbjct: 614 VSRFAAEYYTIAFTCRNARHGSADISSPV 642
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 90/134 (67%), Gaps = 17/134 (12%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQ---------- 59
L E VVNRIAAGEV+ RP NA+KELLENS+DA ST IQ G + Q
Sbjct: 436 LPEAVVNRIAAGEVVARPVNAVKELLENSIDAGSTRIQA----GCWRYRQQADDISINLA 491
Query: 60 --IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
+ DNG GI++ED+ I+C+RFTTSKL F+DL SI T GFRGEALASISHVA LT+ T
Sbjct: 492 TAVSDNGCGIQREDLPILCKRFTTSKLRSFDDLQSIMTHGFRGEALASISHVARLTVTTM 551
Query: 118 TKTSPCAYRWCTYL 131
T+ S YR C Y+
Sbjct: 552 TEDSQVGYR-CEYM 564
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 20/126 (15%)
Query: 192 IASLNNLELLSVEGTDDAFQLKVTG-WITNVNFSTKKMTFLLFINN------PIKRMIEQ 244
+ S L + SV T L TG W T +FIN P+++ I
Sbjct: 663 VYSGGELIIHSVRPTSSVTSLGSTGGWCT------------IFINGRLVECAPLRKAIGD 710
Query: 245 VYSIYLPKGSFP-FVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+YS YLPKG P V+LS + + VDVNVHPTK +V H +++IE +Q++L+ TL G
Sbjct: 711 IYSRYLPKGQKPGAVHLSFNLPGECVDVNVHPTKKDVTISHMESLIEGLQTLLDATLKGH 770
Query: 304 NTSRVF 309
+ SR +
Sbjct: 771 HYSRTY 776
>gi|225419752|ref|ZP_03762055.1| hypothetical protein CLOSTASPAR_06090, partial [Clostridium
asparagiforme DSM 15981]
gi|225041589|gb|EEG51835.1| hypothetical protein CLOSTASPAR_06090 [Clostridium asparagiforme
DSM 15981]
Length = 326
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 171/329 (51%), Gaps = 41/329 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LD+ +N+IAAGEVI+RPA+ +KELLEN++DA++T++ + +K+GG L+++ DNG G
Sbjct: 4 ITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKEGGTTLIRVTDNGCG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+ + + R TSK+ EDL ++S+ GFRGEALASI+ VA + +ITKT S +R
Sbjct: 64 IPKDQISLAFLRHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTGDSLTGFR 123
Query: 127 W------------------CTYLADLMALALMEMSQYLQR---DKEQIGDKEEKQWY--- 162
+ T++A + ++L+R + + D EK
Sbjct: 124 YQIEGGTERGLEEVGAPDGTTFIARNLFYNTPARKKFLKRPVTEGAYVADLVEKIALSHP 183
Query: 163 ----RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
R +++ L S +V E+ + NL + V+ D +KV+G+I
Sbjct: 184 EISIRFIQNNQNKLYTSGNHNLRDLVYTVYGREVTA--NLLPIDVQAQD----IKVSGFI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N N+ + ++ I R IE+ Y Y+ + +PF L ++P+ +DV
Sbjct: 238 GKPLIARGNRNYENYFINGRYIKSSIISRAIEEAYKPYMMQHKYPFTLLHFSIEPEFLDV 297
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
NVHPTK E+ F + + + V + + + L
Sbjct: 298 NVHPTKMELRFRDGELMFKTVLNAVGEAL 326
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L Q+T++ + +K+GG L+++ DNG GI K+ + +
Sbjct: 20 VIERPASVVKELL-----ENAIDAQATAVTIEIKEGGTTLIRVTDNGCGIPKDQISLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++S+ GFRGEALASI+ VA + +ITKT S +R I+ +
Sbjct: 75 RHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTGDSLTGFRYQ-IEGGTERG 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ GT IA +LFYN P R+K LK+P E +AD+V + A+ +P + + N
Sbjct: 134 LEEVGAPDGTTFIARNLFYNTPARKKFLKRPVTEGAYVADLVEKIALSHPEISIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + +++ +YG ++
Sbjct: 194 QN--KLYTSGNHNLRDLVYTVYGREVT 218
>gi|303389209|ref|XP_003072837.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
gi|303301980|gb|ADM11477.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
Length = 564
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 177/336 (52%), Gaps = 47/336 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L V++RI+AGEVI RP N LKE++ENSLDA ST I + + GL L I+DNG
Sbjct: 2 EIKRLPNDVISRISAGEVITRPYNILKEVIENSLDANSTHIAIKIGIDGLSL-TIEDNGD 60
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +ED +++C+++ TSKLT+ EDL S+S++GFRGEAL+SIS + + + +K + + +
Sbjct: 61 GIHEEDFELLCKQYCTSKLTKEEDLFSLSSYGFRGEALSSISRCSRIRVRSKRRENEIGH 120
Query: 126 RWCTYLADLMALALMEMSQ----------YLQRDKEQIGDKE-----EKQWY-------- 162
+++A+ + M Y + +E+ K+ E W
Sbjct: 121 EAVYRDTEIVAIKGIGMKDGSVVEIKDIFYNNKAREKHFSKKRDEIREMMWLVGIYSVFN 180
Query: 163 RTVEHTLVPLMKSQYQPSEKIV--------ERACLLEIASLNNLELLSVEGT----DDAF 210
V L K Q P K+ E ++I L+ EL V+G D
Sbjct: 181 EDVSFDLFYGGKLQEIPKSKMYSGKDGSSNEDRVKMKIKMLD--ELYKVDGELLFLFDEG 238
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNPI---KRMIEQVYSIY---LPKGSFPFVYLSLCM 264
L + + FS KK F+LF+N + + M E ++ +Y + PF+YL L +
Sbjct: 239 HLAI---FSTPQFSLKKGVFILFVNGRLVVSQEMKEALFKVYRGLISDERQPFIYLELNI 295
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+ VDVN+HP+K EV F +E+++I+R+ +E L
Sbjct: 296 EKSMVDVNIHPSKREVLFTNEESVIQRLYECIENKL 331
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I + + GL L I+DNG GI +ED +++C+++ TSKLT+ EDL S+S++GFRGEA
Sbjct: 39 STHIAIKIGIDGLSL-TIEDNGDGIHEEDFELLCKQYCTSKLTKEEDLFSLSSYGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SIS + + + +K + + + A Y D+++ IK G+ + +D+FYN R
Sbjct: 98 LSSISRCSRIRVRSKRRENEIGHEAVYRDTEIV-AIKGIGMKDGSVVEIKDIFYNNKARE 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K + +E ++ +V Y+V N V F L
Sbjct: 157 KHFSKKRDEIREMMWLVGIYSVFNEDVSFDL 187
>gi|119946846|ref|YP_944526.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
gi|171769133|sp|A1SZL2.1|MUTL_PSYIN RecName: Full=DNA mismatch repair protein MutL
gi|119865450|gb|ABM04927.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
Length = 628
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 176/331 (53%), Gaps = 41/331 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I++ +++GG K ++++DNG G
Sbjct: 3 IQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNGAG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ +E + + R TSK++ +DL +I + GFRGEALAS+S V+ LT +K A++
Sbjct: 63 VCQEQLTLALSRHATSKISHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQAWQ 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLMK 174
D+ ++ + + Q ++ D K EK ++ ++ + +
Sbjct: 123 AIAEGRDMQ--VTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRIAL 180
Query: 175 SQYQ------PSEKIVERACLLEIASLNNLELLSV------------EGTDDAFQLKVTG 216
S+++ + KIV + + S L S+ + +D+A LK++G
Sbjct: 181 SRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNA--LKISG 238
Query: 217 WITN-VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+++ ++ + +IN + R I+QVY+ LP+G FP + + DP V
Sbjct: 239 WVSDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQV 298
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DVNVHP+KHEV F + + + S L TL
Sbjct: 299 DVNVHPSKHEVRFHQARWVHDFIVSTLTVTL 329
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I++ +++GG K ++++DNG G+ +E + +
Sbjct: 19 VVERPASVVKELIENS-----LDAGATKIEIDIEKGGAKCIRVKDNGAGVCQEQLTLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALAS+S V+ LT +K A++A ++
Sbjct: 74 RHATSKISHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQAWQAIAEGRDMQVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P A QGT + DLF+N P RR+ LK E+ I +++ R A+ + F LK +
Sbjct: 134 IQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRIALSRFEITFVLKHNH 193
Query: 468 ENLADIRTNVNSSHSE 483
+ + R S E
Sbjct: 194 KIVHQYRATQTQSQQE 209
>gi|443471094|ref|ZP_21061167.1| DNA mismatch repair protein MutL [Pseudomonas pseudoalcaligenes
KF707]
gi|442900997|gb|ELS26996.1| DNA mismatch repair protein MutL [Pseudomonas pseudoalcaligenes
KF707]
Length = 625
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P+I+ L + N+IAAGEV++RPA+ +KELLENSLDA + I V V+QGG+KLL++
Sbjct: 1 MSDLPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDAGARRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGGGIPADDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDDAFQ--------------------- 211
+++++R L ++A N +L++ DA
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKAILALHEARDAISRARRVASVCGPAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERSGLHLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPAVVDVNVHPTKHEVRF 315
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENS-----LDAGARRIDVEVEQGGIKLLRVRDDGGGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTMTSRTADAEQAWQVETEGRDMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KAI 200
>gi|149377526|ref|ZP_01895267.1| DNA mismatch repair protein MutL [Marinobacter algicola DG893]
gi|149358218|gb|EDM46699.1| DNA mismatch repair protein MutL [Marinobacter algicola DG893]
Length = 636
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 41/315 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ L + N+IAAGEV++RPA+ +KEL+EN+LDA + + + V+QGG+KL++++D+G
Sbjct: 2 PSIRLLTPRLANQIAAGEVVERPASVVKELVENALDAGARRVDIEVEQGGVKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI + D+ + R TSK+ EDL ++++ GFRGEALASIS V+ L + ++T+ A
Sbjct: 62 MGIDETDLPLALSRHATSKIENLEDLEAVASLGFRGEALASISSVSRLALTSRTERQEAA 121
Query: 125 YRWCTYLADLMA-------------------LALMEMSQYLQRDKEQIGDKEE--KQWYR 163
R D+ A ++L+ +K + EE ++
Sbjct: 122 SRVEVEGRDMDASISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECIRRQAL 181
Query: 164 TVEHTLVPLMKSQ-----YQPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQLKV 214
+ T L +Q +P+E ++R L ++N ++ E T LK+
Sbjct: 182 SRFDTGFTLRHNQRVVQSLRPAENPLDRERRIGSLCGQQFIDNAVVIDAEATG----LKL 237
Query: 215 TGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
GW+ FS + F+N + R + Q Y L P L L +DP
Sbjct: 238 WGWVALPTFSRSQADLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHPAFVLYLEVDPA 297
Query: 268 NVDVNVHPTKHEVHF 282
NVDVNVHPTKHEV F
Sbjct: 298 NVDVNVHPTKHEVRF 312
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 1/176 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+ + V+QGG+KL++++D+G GI + D+ + R TSK+ EDL ++++ GFRGEALAS
Sbjct: 43 VDIEVEQGGVKLIRVRDDGMGIDETDLPLALSRHATSKIENLEDLEAVASLGFRGEALAS 102
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ L + ++T+ A R + I P A GT + DLF+N P RRK L
Sbjct: 103 ISSVSRLALTSRTERQEAASRVEVEGRDMDASISPAAHPVGTTVEVRDLFFNTPARRKFL 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYG 490
+ E+N + + + R A+ GFTL+ + +R N E IG++ G
Sbjct: 163 RTEKTEFNHVEECIRRQALSRFDTGFTLRHNQRVVQSLRPAENPLDRERRIGSLCG 218
>gi|443698322|gb|ELT98370.1| hypothetical protein CAPTEDRAFT_45005, partial [Capitella teleta]
Length = 323
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 165/319 (51%), Gaps = 41/319 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD + N+IAAGEV++RPA+A+KELLENS+DA + + V V+ GG+KL++I+D+G G
Sbjct: 4 IRLLDNRLANQIAAGEVVERPASAVKELLENSIDAGAKRLTVEVESGGVKLIRIRDDGYG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+++ EDL ++T GFRGEALASIS V+ LT+ + + ++
Sbjct: 64 IPKDELALALSRHATSKISELEDLEGVATLGFRGEALASISSVSRLTLTSNVEEQESGWQ 123
Query: 127 WCTYLADLMALAL---------MEMS----------QYLQRDKEQIGDKEE--KQWYRT- 164
D+ A + +E+ ++L+ +K + EE K+ +
Sbjct: 124 VRVEGRDMEAQVMPAPHPVGTTIEVKDLFFNTPARRKFLRTEKTEFSHLEEVVKRLALSR 183
Query: 165 --VEHTLVPLMKS--QYQPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V TL +S Q +P+ E+ A L + N ++ V D LK+ G
Sbjct: 184 FDVGFTLRHNQRSIHQLRPASTQAEKDRRVAALCGPKFIENAVIIDV----DVSGLKLYG 239
Query: 217 WITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ FS F+N + R + Q Y L G P L L +DP V
Sbjct: 240 WVGLPTFSRASADLQYFFVNGRVIRDKLVGHAVRQAYRDVLYGGRHPTFVLYLELDPALV 299
Query: 270 DVNVHPTKHEVHFLHEDTI 288
DVNVHPTKHEV F T+
Sbjct: 300 DVNVHPTKHEVRFRDGRTV 318
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S +++ L S + + + V V+ GG+KL++I+D+G GI K+++ +
Sbjct: 20 VVERPASAVKELLENSIDA-----GAKRLTVEVESGGVKLIRIRDDGYGIPKDELALALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+++ EDL ++T GFRGEALASIS V+ LT+ + + ++ ++
Sbjct: 75 RHATSKISELEDLEGVATLGFRGEALASISSVSRLTLTSNVEEQESGWQVRVEGRDMEAQ 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P GT I +DLF+N P RRK L+ E++ + +VV R A+ VGFTL+
Sbjct: 135 VMPAPHPVGTTIEVKDLFFNTPARRKFLRTEKTEFSHLEEVVKRLALSRFDVGFTLRHNQ 194
Query: 468 ENLADIR 474
++ +R
Sbjct: 195 RSIHQLR 201
>gi|71280731|ref|YP_267089.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
gi|123733831|sp|Q48A24.1|MUTL_COLP3 RecName: Full=DNA mismatch repair protein MutL
gi|71146471|gb|AAZ26944.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
Length = 652
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 175/344 (50%), Gaps = 37/344 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KEL+ENSLDA +TSI + V +GG+K ++I DNG G
Sbjct: 3 IAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGHG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS VA LT+ +K ++ A++
Sbjct: 63 IVKEELTLALSRHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATAWQ 122
Query: 127 WCTYLADL------------MALALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ ++ ++++ ++L+ +K + +E + H
Sbjct: 123 AVAEGRDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNHIDEVVRRIALAH 182
Query: 168 TLVPLMKS-------QYQPSEKIVERACLLEIASLNNLELL--SVEGTDDAFQLKVTGWI 218
V + QY+ + + C+ +A + + + +VE + ++GW+
Sbjct: 183 FEVSFSLTHNGNTVRQYRMASTHAQ--CIKRVAMVCGPKFIEHAVEVDCPHDNMTLSGWL 240
Query: 219 TNVNFSTKKMTFLL-FINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+FS + ++N + R I Q Y+ LP ++P L L +D + VDV
Sbjct: 241 AKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQLDHREVDV 300
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
NVHP+KHEV F + + + S+ K L + +T + S
Sbjct: 301 NVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADS 344
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 7/201 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +TSI + V +GG+K ++I DNG GI KE++ +
Sbjct: 19 VVERPASVIKELIENS-----LDAGATSIHIDVDKGGIKKIKITDNGHGIVKEELTLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ DL +I + GFRGEALASIS VA LT+ +K ++ A++A +
Sbjct: 74 RHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATAWQAVAEGRDMSVN 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A GT I DLF+N P RRK L+ E+N I +VV R A+ + V F+L
Sbjct: 134 IKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNHIDEVVRRIALAHFEVSFSLTHNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNI 488
+ R + S+H++ I +
Sbjct: 194 NTVRQYR--MASTHAQCIKRV 212
>gi|88798917|ref|ZP_01114499.1| DNA mismatch repair protein [Reinekea blandensis MED297]
gi|88778397|gb|EAR09590.1| DNA mismatch repair protein [Reinekea blandensis MED297]
Length = 632
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 172/342 (50%), Gaps = 53/342 (15%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+QP I L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I++ ++QGG+KL++++
Sbjct: 8 EQPRNIAVLSPRLANQIAAGEVVERPASVVKELIENSLDAGATRIEIEIEQGGVKLIRVR 67
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG GI ++D+ + R TSK+ ++L ++ + GFRGEALAS++ V+ LT+ +K
Sbjct: 68 DNGRGIPQDDLALALARHATSKVYSLDELEALGSLGFRGEALASVASVSRLTLTSKPANQ 127
Query: 122 PCAYRWCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE--- 158
A++ ++ D MA L + ++L+ +K + EE
Sbjct: 128 SEAWQVQSHGRD-MATELAPAAHTDGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVK 186
Query: 159 -------------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG 205
+ RT+ H+L ++ + +E+ A LL+ + N ++ E
Sbjct: 187 RQALSRFDVAFSLRHNNRTI-HSL----RAAHTQAEQQRRIAQLLKPEFMTNALVVETER 241
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFV 258
L++TGW+ FS F N I ++Q Y L G P
Sbjct: 242 AG----LRMTGWVGLPTFSRSMPDMQYFFVNGRVVKDKVIGHAVKQAYRDVLYHGRHPCF 297
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L L +D VDVNVHPTKHEV F + + + + S L + L
Sbjct: 298 VLFLELDSSGVDVNVHPTKHEVRFRDQRLVHDFLFSQLHRAL 339
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I++ ++QGG+KL++++DNG GI ++D+ +
Sbjct: 29 VVERPASVVKELIENS-----LDAGATRIEIEIEQGGVKLIRVRDNGRGIPQDDLALALA 83
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ ++L ++ + GFRGEALAS++ V+ LT+ +K A++ +
Sbjct: 84 RHATSKVYSLDELEALGSLGFRGEALASVASVSRLTLTSKPANQSEAWQVQSHGRDMATE 143
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A GT + DLF+N P RRK L+ E+N + +VV R A+ V F+L+ N
Sbjct: 144 LAPAAHTDGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQALSRFDVAFSLRHNN 203
Query: 468 ENLADIRT 475
+ +R
Sbjct: 204 RTIHSLRA 211
>gi|170723845|ref|YP_001751533.1| DNA mismatch repair protein [Pseudomonas putida W619]
gi|229486326|sp|B1JAD6.1|MUTL_PSEPW RecName: Full=DNA mismatch repair protein MutL
gi|169761848|gb|ACA75164.1| DNA mismatch repair protein MutL [Pseudomonas putida W619]
Length = 633
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLTNQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVAFHLRHNGKSILSLHEAHDETARARRVGAICGGGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVAFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYGNNI 493
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICGGGF 224
>gi|423097806|ref|ZP_17085602.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens Q2-87]
gi|397888463|gb|EJL04946.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens Q2-87]
Length = 637
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGG 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ ++Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MASHVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVGAVCGAGFLEQALPIEVERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPAVVDVNVHPTKHEVRF 320
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 28 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGGGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAWQVETEGRDMASH 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+ + + + +++ + +G + G
Sbjct: 203 KTILSLHEAHDDAARARRVGAVCG 226
>gi|359397032|ref|ZP_09190082.1| DNA mismatch repair protein mutL [Halomonas boliviensis LC1]
gi|357968826|gb|EHJ91275.1| DNA mismatch repair protein mutL [Halomonas boliviensis LC1]
Length = 635
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 40/315 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I LD + N+IAAGEV++RP++ KEL+EN++DA S I+V ++QGG +L++++D+G
Sbjct: 6 PRIHVLDPRLANQIAAGEVVERPSSVTKELIENAIDAGSQRIEVEIEQGGARLIKVRDDG 65
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +ED+ + R TSK+ EDL +S+ GFRGEALASIS V+ L +I+ + P
Sbjct: 66 IGIGEEDLPLALARHATSKIGSLEDLEGVSSLGFRGEALASISSVSRLELISNAEEDP-R 124
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPL 172
+ W A + + + + + D + EK + VE
Sbjct: 125 HGWRVVAEGRGMDARVTPAPHPRGTSVGVRDLFFNTPARRKFLRTEKTEFAHVEEAFRRQ 184
Query: 173 MKSQY------QPSEKIVERACLLEIASLNNLELLSVEGTD----------DAFQLKVTG 216
S+Y + ++K++ + A+ + S+ G + +A L+++G
Sbjct: 185 ALSRYDIAWVLRHNQKVIHQLPAGHSAAARERRIASLLGKNFIEHARYIEREAGGLRLSG 244
Query: 217 WI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
W+ T+ + F F+N + R + Q Y L G P L L +DP
Sbjct: 245 WVGLPTHSRSQADQQYF--FVNGRVVRDRLVAHAVRQAYRDVLFNGRHPVFVLYLELDPD 302
Query: 268 NVDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 303 VVDVNVHPTKHEVRF 317
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I+V ++QGG +L++++D+G GI +ED+ + R TSK+ EDL +S+ GFRGEA
Sbjct: 44 SQRIEVEIEQGGARLIKVRDDGIGIGEEDLPLALARHATSKIGSLEDLEGVSSLGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSP-CAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L +I+ + P +R + + P +GT + DLF+N P R
Sbjct: 104 LASISSVSRLELISNAEEDPRHGWRVVAEGRGMDARVTPAPHPRGTSVGVRDLFFNTPAR 163
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYG 490
RK L+ E+ + + R A+ + + L+ + + + +++ E I ++ G
Sbjct: 164 RKFLRTEKTEFAHVEEAFRRQALSRYDIAWVLRHNQKVIHQLPAGHSAAARERRIASLLG 223
Query: 491 NNISRRVR 498
N R
Sbjct: 224 KNFIEHAR 231
>gi|226942900|ref|YP_002797973.1| DNA mismatch repair protein [Azotobacter vinelandii DJ]
gi|259509928|sp|C1DLQ0.1|MUTL_AZOVD RecName: Full=DNA mismatch repair protein MutL
gi|226717827|gb|ACO76998.1| DNA mismatch repair protein [Azotobacter vinelandii DJ]
Length = 641
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 165/341 (48%), Gaps = 49/341 (14%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +I+ L + N+IAAGEV++RPA+ KELLENSLDA + + + V+QGG+KLL++
Sbjct: 1 MSGPARIQLLSLRLANQIAAGEVVERPASVAKELLENSLDAGARRVDIEVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL +++ GFRGEALASI VA LT+ ++T
Sbjct: 61 RDDGCGIAADDLPLALARHATSKIRELEDLERVASLGFRGEALASIGSVARLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGQAWQVETEGRD--------MEARVQPAAYPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDD--------------AF-------- 210
+ +++V R L ++A N L++ D AF
Sbjct: 173 EHLQEVVRRLALARFDVAFHLRHNGRSALALHEAGDETARARRVAAVCGPAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERAGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L L +DP VDVNVHPTKHEV F I + + L + L
Sbjct: 293 LFLEVDPAVVDVNVHPTKHEVRFRDSRMIHDFLYGTLHRVL 333
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S + + + V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGARRVDIEVEQGGVKLLRVRDDGCGIAADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL +++ GFRGEALASI VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVASLGFRGEALASIGSVARLTLTSRTADAGQAWQVETEGRDMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK L+ E+ + +VV R A+ V F L+
Sbjct: 138 VQPAAYPVGTSVEVRDLFFNTPARRKFLRAEKTEFEHLQEVVRRLALARFDVAFHLR 194
>gi|407366808|ref|ZP_11113340.1| DNA mismatch repair protein [Pseudomonas mandelii JR-1]
Length = 632
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 162/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL++
Sbjct: 1 MTHAARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++TK
Sbjct: 61 RDDGSGISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTKD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 ADQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +LS+ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ F+ + F N + + Q Y L G P
Sbjct: 233 IERNGLHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPAGVDVNVHPTKHEVRF 315
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++TK + A++ +
Sbjct: 78 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTKDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|326795798|ref|YP_004313618.1| DNA mismatch repair protein mutL [Marinomonas mediterranea MMB-1]
gi|326546562|gb|ADZ91782.1| DNA mismatch repair protein mutL [Marinomonas mediterranea MMB-1]
Length = 661
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 166/350 (47%), Gaps = 81/350 (23%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ +KELLENSLDA++T + V ++QGG++ ++I+DNG
Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAEATQLDVDIEQGGVRRMKIRDNGR 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK++ +DL ++ T GFRGEALASIS V+ + + +K A+
Sbjct: 63 GIVKDDLSLAMSRHATSKISTLDDLEAVQTLGFRGEALASISSVSRMHLTSKAYGEDEAW 122
Query: 126 RWCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE------- 158
R D M A+ S ++L+ +K + EE
Sbjct: 123 RVEAEGKD-MTTAVRPASHPDGTTIEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLAL 181
Query: 159 -------------KQWY--RTV------EHTLVPLMKSQYQPSEKIVERACLLEIASLNN 197
KQ Y R V EH L L+ +K +E A +++
Sbjct: 182 SRYDVGFRLSHNGKQVYDLRPVTDQLHAEHRLGTLL------GKKFIENALTIDV----- 230
Query: 198 LELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYL 250
+A L++ GWI FS + F+N + R + Q Y L
Sbjct: 231 ----------EAAGLRLWGWIGLPTFSRSQADLQYFFVNGRVVRDKLVAHAVRQAYRDVL 280
Query: 251 PKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSML 296
G P L L +DP VDVNVHPTKHEV F L D + R+ ++
Sbjct: 281 YNGRHPTFVLYLELDPATVDVNVHPTKHEVRFRDGRLVHDFLFSRIHKVI 330
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S ++T + V ++QGG++ ++I+DNG GI K+D+ +
Sbjct: 20 VVERPASVVKELLENS-----LDAEATQLDVDIEQGGVRRMKIRDNGRGIVKDDLSLAMS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL ++ T GFRGEALASIS V+ + + +K A+R +
Sbjct: 75 RHATSKISTLDDLEAVQTLGFRGEALASISSVSRMHLTSKAYGEDEAWRVEAEGKDMTTA 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P + GT I DLF+N P RRK L+ E+N + +VV R A+ VGF L
Sbjct: 135 VRPASHPDGTTIEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLALSRYDVGFRLSHNG 194
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + D+R + H+E +G + G
Sbjct: 195 KQVYDLRPVTDQLHAEHRLGTLLG 218
>gi|421263639|ref|ZP_15714670.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401689325|gb|EJS84788.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 617
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L+QI+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLMQIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAIAFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L+QI+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLMQIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFTL 189
>gi|167035937|ref|YP_001671168.1| DNA mismatch repair protein [Pseudomonas putida GB-1]
gi|189030406|sp|B0KKZ7.1|MUTL_PSEPG RecName: Full=DNA mismatch repair protein MutL
gi|166862425|gb|ABZ00833.1| DNA mismatch repair protein MutL [Pseudomonas putida GB-1]
Length = 632
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVMSLGFRGEALASISSVARLTMTSRTASASEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLKVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVMSLGFRGEALASISSVARLTMTSRTASASEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICG 221
>gi|366162303|ref|ZP_09462058.1| DNA mismatch repair protein MutL [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 172/343 (50%), Gaps = 53/343 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI LDE N+IAAGEV++RPA+ +KEL+ENS+DA S++I + + GG+ L+++ DNG
Sbjct: 3 KIVILDENTSNQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGVSLIKVVDNGN 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA--HLT---------- 113
GI ++D++I ER +TSK+ + +DL SIST GFRGEALASI+ V+ LT
Sbjct: 63 GIDEDDVEIAFERHSTSKIRRADDLESISTLGFRGEALASIASVSLVELTSRIKDRQYGK 122
Query: 114 -------IITKTKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
II + + + C + DL ++L++D + G +
Sbjct: 123 YIKIQGGIIKEVRQTGCPVGTTFIVRDLFYNTPARF-KFLKKDTTEAG---------YIS 172
Query: 167 HTLVPLMKSQYQPSEKIV-ERACLLEIASLNNL--------------ELLSVEGTDDAFQ 211
+ + Q S K++ R ++ N+L E+L V+ D+ +
Sbjct: 173 DMVNRIALGNQQISMKLINNRNSVIHTPGNNDLLSAIFSIYGKETAKEVLEVKYQDE--K 230
Query: 212 LKVTGWI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+++ G++ N N+ + + N I I++ Y YL K F FV L + +
Sbjct: 231 IEIYGYVGKPEIARANRNYQSIYINGRYVKNKTISSAIDEAYKTYLLKNKFAFVVLHIRI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
+P VDVNVHPTK EV F E I + V + LL + R
Sbjct: 291 NPLFVDVNVHPTKMEVRFSDEPAIFKAVYHAVNNALLSKSLIR 333
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S++I + + GG+ L+++ DNG GI ++D++I ER +TSK+ + +DL SIST GFRGEA
Sbjct: 40 SSNISIEINNGGVSLIKVVDNGNGIDEDDVEIAFERHSTSKIRRADDLESISTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ + + ++ K + I + ++ GT I DLFYN P R
Sbjct: 100 LASIASVSLVELTSRIKDRQYG-KYIKIQGGIIKEVRQTGCPVGTTFIVRDLFYNTPARF 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK+ + E I+D+V+R A+ N + ++K N + I T N+ I +IYG
Sbjct: 159 KFLKKDTTEAGYISDMVNRIALGNQQI--SMKLINNRNSVIHTPGNNDLLSAIFSIYGKE 216
Query: 493 ISRRV 497
++ V
Sbjct: 217 TAKEV 221
>gi|53804020|ref|YP_114135.1| DNA mismatch repair protein [Methylococcus capsulatus str. Bath]
gi|53757781|gb|AAU92072.1| DNA mismatch repair protein MutL [Methylococcus capsulatus str.
Bath]
Length = 611
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++L ++N+IAAGEVI+RPA+ +KEL+EN+ DA + ++V V+QGG++L++++D+G
Sbjct: 14 RIRRLPPQLINQIAAGEVIERPASVVKELVENAFDAGARQVEVDVEQGGVRLIRVRDDGC 73
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +ED+ + R TSK+ EDL +++ GFRGEAL SIS VA LT+ ++T PC
Sbjct: 74 GIDREDLGLALSRHATSKIASLEDLERVASMGFRGEALPSISAVARLTLTSRTADVPCG- 132
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIV 184
W + ++ +Q+ Q ++ D +Y T + K+++ + +V
Sbjct: 133 -WQVSADGSESDFDIQPAQHAQGTTVEVRDL----FYNTPARRKFLRAEKTEFGHIQTLV 187
Query: 185 ERACLLEI-----ASLNNLELLSVE----------------GTD----------DAFQLK 213
+R L N E+L ++ G D +A L+
Sbjct: 188 QRMALARFDVGFRLRHNQREVLRLQPDAEEGGRPERIGALCGPDFLEQALRVEFEASGLR 247
Query: 214 VTGWITNVNFSTKKMTFLLFINN--PIK-----RMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ GW+ FS + F N PI+ I Q Y L P L L +DP
Sbjct: 248 LHGWVGLPTFSRSQADLQFFYVNHRPIRDKLVGHAIRQAYQDVLYHQRQPVYVLYLEIDP 307
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
VDVN HP K EV F + + + S L + + G R
Sbjct: 308 ALVDVNAHPAKLEVRFREGRMVHDFLFSALHRAIAGHRPGR 348
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + F + ++V V+QGG++L++++D+G GI +ED+ +
Sbjct: 31 VIERPASVVKELV-----ENAFDAGARQVEVDVEQGGVRLIRVRDDGCGIDREDLGLALS 85
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +++ GFRGEAL SIS VA LT+ ++T PC ++ S S+
Sbjct: 86 RHATSKIASLEDLERVASMGFRGEALPSISAVARLTLTSRTADVPCGWQVSADGSESDFD 145
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P QGT + DLFYN P RRK L+ E+ I +V R A+ VGF L+
Sbjct: 146 IQPAQHAQGTTVEVRDLFYNTPARRKFLRAEKTEFGHIQTLVQRMALARFDVGFRLRHNQ 205
Query: 468 ENLADIRTNV-NSSHSEVIGNIYGNNI 493
+ ++ + E IG + G +
Sbjct: 206 REVLRLQPDAEEGGRPERIGALCGPDF 232
>gi|423689612|ref|ZP_17664132.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens SS101]
gi|387997535|gb|EIK58864.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens SS101]
Length = 638
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL+++D+G+
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGS 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRGAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEANDDAARARRVAAVCGSGFLEQALPIEIERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPSVVDVNVHPTKHEVRF 320
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 28 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRGAEQAWQVETEGRDMAPR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENL 470
+ +
Sbjct: 203 KTI 205
>gi|374704696|ref|ZP_09711566.1| DNA mismatch repair protein [Pseudomonas sp. S9]
Length = 623
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I+V V+QGG+KLL++
Sbjct: 1 MTDAARIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+GTGI +D+ + R TSK+ + EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGTGISADDLPLALARHATSKIRELEDLEQVLSLGFRGEALASISSVSRLTLTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MRPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLLEI-----ASLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L N +LS+ E D+A +
Sbjct: 173 DHLQEVIKRLALARFDVGFQLRHNGKTILSLHEAHDEASRARRVSSVCSNGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLEIDPGVVDVNVHPTKHEVRF 315
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 19/225 (8%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I+V V+QGG+KLL+++D+GTGI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIEVDVEQGGVKLLRVRDDGTGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLEQVLSLGFRGEALASISSVSRLTLTSRTADAEQAWQVETEGRDMRPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVGFQLRHNG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALARKA 512
+ + +++ +H E + R RR SS + +A
Sbjct: 198 KTI----LSLHEAHDE----------ASRARRVSSVCSNGFLEQA 228
>gi|410091835|ref|ZP_11288383.1| DNA mismatch repair protein [Pseudomonas viridiflava UASWS0038]
gi|409760849|gb|EKN45966.1| DNA mismatch repair protein [Pseudomonas viridiflava UASWS0038]
Length = 654
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 28 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 87
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 88 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRNADQAW 147
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 148 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 199
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 200 VIKRMALARFDVAFHLRHNGKTILSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 259
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 260 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 319
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F T+ + + L + L
Sbjct: 320 DPAAVDVNVHPTKHEVRFRDGRTVHDFLYGTLHRAL 355
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 45 VVERPASVIKELLENS-----LDSGARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 99
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 100 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRNADQAWQVETEGRDMAPR 159
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 160 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 219
Query: 468 ENL 470
+ +
Sbjct: 220 KTI 222
>gi|392419693|ref|YP_006456297.1| DNA mismatch repair protein [Pseudomonas stutzeri CCUG 29243]
gi|390981881|gb|AFM31874.1| DNA mismatch repair protein [Pseudomonas stutzeri CCUG 29243]
Length = 625
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL++
Sbjct: 1 MSEVPRIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ASEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ + DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKVVLALHQAEDDAARARRVASVCGPAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTADASEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLR 194
>gi|126666949|ref|ZP_01737925.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
gi|126628665|gb|EAZ99286.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
Length = 630
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 164/321 (51%), Gaps = 53/321 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+EN+LDA ++ + V ++QGG+KL++++D+G
Sbjct: 2 PHIHLLPPRLANQIAAGEVVERPASVVKELIENALDAGASRVDVDIEQGGVKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI ED+ + R TSK+T +DL ++++ GFRGEALASIS V+ L++ ++T+
Sbjct: 62 CGIAAEDLSLALSRHATSKITSLDDLEAVTSLGFRGEALASISSVSRLSLTSRTENQEAA 121
Query: 120 -------------TSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE------ 158
SP A+ + + DL ++L+ +K + G EE
Sbjct: 122 SKVEVEGRDMDAHVSPAAHPVGSTVEVRDLF-FNTPARRKFLRTEKTEFGHVEECVRRQA 180
Query: 159 ----------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDD 208
+ R V+ +L P + S+ +I A L ++N ++S E T
Sbjct: 181 LSCFDTGFNLRHNQRAVQ-SLRPAL-SELDKERRI---ASLCGQQFIDNAVVISAEATG- 234
Query: 209 AFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLS 261
LK+ GW+ FS + F+N + R + Q Y L L
Sbjct: 235 ---LKLWGWVALPTFSRSQTDLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHAAFVLY 291
Query: 262 LCMDPKNVDVNVHPTKHEVHF 282
L +DP +VDVNVHPTKHEV F
Sbjct: 292 LEVDPGSVDVNVHPTKHEVRF 312
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 11/190 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ + L + SRV V ++QGG+KL++++D+G GI ED+ +
Sbjct: 20 VVERPASVVKELIENALDAGASRV--------DVDIEQGGVKLIRVRDDGCGIAAEDLSL 71
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+T +DL ++++ GFRGEALASIS V+ L++ ++T+ A + +
Sbjct: 72 ALSRHATSKITSLDDLEAVTSLGFRGEALASISSVSRLSLTSRTENQEAASKVEVEGRDM 131
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ P A G+ + DLF+N P RRK L+ E+ + + V R A+ GF L+
Sbjct: 132 DAHVSPAAHPVGSTVEVRDLFFNTPARRKFLRTEKTEFGHVEECVRRQALSCFDTGFNLR 191
Query: 465 KQNENLADIR 474
+ +R
Sbjct: 192 HNQRAVQSLR 201
>gi|388471650|ref|ZP_10145859.1| DNA mismatch repair protein MutL [Pseudomonas synxantha BG33R]
gi|388008347|gb|EIK69613.1| DNA mismatch repair protein MutL [Pseudomonas synxantha BG33R]
Length = 638
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+QGG+KLL+++D+G+
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGS 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEANDDAARARRVAAVCGSGFLEQALPIEIERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPSVVDVNVHPTKHEVRF 320
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 28 VVERPASVIKELLENSIDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENL 470
+ +
Sbjct: 203 KTI 205
>gi|104783874|ref|YP_610372.1| DNA mismatch repair protein [Pseudomonas entomophila L48]
gi|122985730|sp|Q1I447.1|MUTL_PSEE4 RecName: Full=DNA mismatch repair protein MutL
gi|95112861|emb|CAK17589.1| DNA mismatch repair protein MutL [Pseudomonas entomophila L48]
Length = 632
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I+V V+QGG+KLL+++DNG
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIEVEVEQGGVKLLRVRDNGG 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A+
Sbjct: 66 GIAPDDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTADAGEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N + S+ E TD+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKTIFSLHEATDEMARARRVGTICGPGFLEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEC 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPTGVDVNVHPTKHEVRF 315
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I+V V+QGG+KLL+++DNG GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIEVEVEQGGVKLLRVRDNGGGIAPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTADAGEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIRTNVNS-SHSEVIGNIYG 490
+ + + + + + +G I G
Sbjct: 198 KTIFSLHEATDEMARARRVGTICG 221
>gi|170744658|ref|YP_001773313.1| DNA mismatch repair protein MutL [Methylobacterium sp. 4-46]
gi|168198932|gb|ACA20879.1| DNA mismatch repair protein MutL [Methylobacterium sp. 4-46]
Length = 641
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 158/316 (50%), Gaps = 44/316 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P +++LD +V+RIAAGEV++RPA A+KEL+EN++DA +TSI+VT++ GG +L+++ D+G
Sbjct: 9 PVVRRLDPVLVDRIAAGEVVERPAAAVKELVENAIDAGATSIEVTIQAGGRRLIRVVDDG 68
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS--- 121
G+ ED+ + ER TSKL DL+ I T GFRGEAL SI VA L+++++T +
Sbjct: 69 IGMSAEDLALAVERHATSKLPDG-DLDRIDTLGFRGEALPSIGAVARLSLVSRTAEAASG 127
Query: 122 --------------PCAYRWCTY--LADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
P A T + DL A + ++L+ D+ + G E V
Sbjct: 128 HGLVVDAGIRGPVRPVAAERGTRVEVTDLFAATPARL-KFLKSDRAEAGAVAEILRRLAV 186
Query: 166 EHTLVP------------LMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
H + ++ ++ P + A +L N LS+E + F L
Sbjct: 187 AHPQIRFTLRGESGGGGFVLPAETGPGSWLRRLAAVLGPDFAENSAPLSLE--REGFALD 244
Query: 214 VTGWITNVNFSTKKMTFLLFINN--PIK-----RMIEQVYSIYLPKGSFPFVYLSLCMDP 266
G + F T + F+ N P++ + Y+ + P + L+L DP
Sbjct: 245 --GHVGLPTFHRAAATHMHFVVNGRPVRDRLLLGAVRGAYADVMASDRHPVLALALTCDP 302
Query: 267 KNVDVNVHPTKHEVHF 282
VDVNVHP K EV F
Sbjct: 303 TQVDVNVHPAKTEVRF 318
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+VT++ GG +L+++ D+G G+ ED+ + ER TSKL DL+ I T GFRGEA
Sbjct: 47 ATSIEVTIQAGGRRLIRVVDDGIGMSAEDLALAVERHATSKLPDG-DLDRIDTLGFRGEA 105
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI VA L+++++T + + +D+ ++ P++P A +GT++ DLF P R
Sbjct: 106 LPSIGAVARLSLVSRTAEAASGH-GLVVDAGIRGPVRPVAAERGTRVEVTDLFAATPARL 164
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
K LK E +A+++ R AV +P + FTL+ ++
Sbjct: 165 KFLKSDRAEAGAVAEILRRLAVAHPQIRFTLRGES 199
>gi|159899518|ref|YP_001545765.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
gi|159892557|gb|ABX05637.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
Length = 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 174/337 (51%), Gaps = 34/337 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD T+ +IAAGEV++RPA+ +KEL+ENS+DA +T I+V ++GG + L+IQDNG G
Sbjct: 3 IRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY- 125
I ++++ R TSK+T+ EDL SI T GFRGEAL SI+ VA +T +T+T
Sbjct: 63 IASDEVETAFLRHATSKVTEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVGTE 122
Query: 126 -------------RWCTYLADLMALALMEMS----QYLQRDKEQIGD-----KEEKQWYR 163
R C+ L + ++++ D ++ + Y
Sbjct: 123 LRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFMRSDATEMSQISTIVTQYALAYP 182
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLLEIASLN-NLELLSVEGTDDAFQ--LKVTGWITN 220
+ TL+ K Q L+E+ ++ E++SV+ T +A ++V G+++
Sbjct: 183 NIRWTLLLDGKLALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVHGFVSQ 242
Query: 221 VN-FSTKKMTFLLFIN-------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ F + LF+N + MIE+ Y L KG P V L++ ++P+ VDVN
Sbjct: 243 PSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPEAVDVN 302
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
VHPTK EV F ++ + + + + L +T R +
Sbjct: 303 VHPTKSEVKFRNQSHVYGALTKAVREALAAQSTIRAW 339
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V ++GG + L+IQDNG GI ++++ R TSK+T+ EDL SI T GFRGEA
Sbjct: 39 ATEIRVEAREGGKRELRIQDNGCGIASDEVETAFLRHATSKVTEIEDLFSIRTLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ VA +T +T+T +++ P + GT +LFYN P R
Sbjct: 99 LPSIASVAQVTCLTRTAADEVGTELRIAGGEIQAKT-PRGCSVGTTFTIRNLFYNTPARL 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K ++ + E ++I+ +V++YA+ P++ +TL + LA ++T N + + +YG +
Sbjct: 158 KFMRSDATEMSQISTIVTQYALAYPNIRWTLLLDGK-LA-LQTPGNGRLLDALIELYGID 215
Query: 493 ISRRV 497
+ R +
Sbjct: 216 VGREM 220
>gi|409418457|ref|ZP_11258450.1| DNA mismatch repair protein [Pseudomonas sp. HYS]
Length = 633
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL++
Sbjct: 1 MSSSARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVEVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGAGIAADDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEF 172
Query: 178 QPSEKIVERACLLEI-----ASLNNLELLSV-EGTDDAFQ-------------------- 211
++++ R L N +LS+ E DD +
Sbjct: 173 DHLQEVIRRLALARFDVGFHLRHNGKSILSLHEAHDDTARARRVAAICGPGFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPTGVDVNVHPTKHEVRF 315
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAKRIDVEVEQGGVKLLRVRDDGAGIAADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENL 470
+++
Sbjct: 198 KSI 200
>gi|26991574|ref|NP_746999.1| DNA mismatch repair protein [Pseudomonas putida KT2440]
gi|37999611|sp|Q88DD1.1|MUTL_PSEPK RecName: Full=DNA mismatch repair protein MutL
gi|24986662|gb|AAN70463.1|AE016688_2 DNA mismatch repair protein MutL [Pseudomonas putida KT2440]
Length = 632
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I + V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSVEGTDDAFQ-------------------------- 211
++ R L N +LS+ D
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDEIARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 14/208 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I + V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIRTNVNSSHSEV-----IGNIYG 490
+++ +++ +H E+ +G I G
Sbjct: 198 KSI----LSLHEAHDEIARARRVGAICG 221
>gi|416886590|ref|ZP_11922629.1| DNA mismatch repair protein, partial [Pseudomonas aeruginosa
152504]
gi|334833476|gb|EGM12569.1| DNA mismatch repair protein [Pseudomonas aeruginosa 152504]
Length = 393
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 49/341 (14%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSVEGTDD--------------AF-------- 210
+++++R L ++A N + ++ D AF
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L +DP VDVNVHPTKHEV F + + + L + L
Sbjct: 293 LFFEVDPAVVDVNVHPTKHEVRFRDSRMVHDFLYGTLHRAL 333
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|397904384|ref|ZP_10505300.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
gi|397162604|emb|CCJ32634.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
Length = 609
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 169/329 (51%), Gaps = 39/329 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ ++ +IAAGEV++RPA+ +KEL+ENS+DA ++ I+V ++ GG+ L++I DNG
Sbjct: 3 KIRILDDDLITKIAAGEVVERPASVVKELIENSIDAGASIIEVEIENGGISLIKITDNGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK---TSP 122
GI K+D++I R TTSK+ +DL +I T GFRGEALASI V+ + +ITKTK T
Sbjct: 63 GIEKDDVEIAFLRHTTSKIKNEDDLYNIRTLGFRGEALASICAVSKVEMITKTKDDLTGT 122
Query: 123 CAYRWCTYLADLMALALMEMSQYLQRD---------KEQIGDKEEKQWYRTVEHTLVPLM 173
Y + D + + + + +D K E + +L L
Sbjct: 123 KIYIEGGEIIDKIECGAPDGTTIIVKDLFYNTPARLKFLKTPSREAMIVSEIVQSLA-LS 181
Query: 174 KS----QYQPSEKIV-----ERACLLEIASL------NNLELLSVEGTDDAFQLKVTGWI 218
K +Y+ + KIV + L I SL +NL + E D +K+ G+I
Sbjct: 182 KENISFKYKNNGKIVFATKGDGNLLNAILSLYGRQVKDNLLKIDYEEND----IKIEGYI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N N+ T + L N I IE VY Y FPF + + M+P+ +DV
Sbjct: 238 GNNALGKNNRNYQTLFINGRLIKNKTINAAIENVYRSYSTSDKFPFYVVKIIMNPQLIDV 297
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
NVHPTK EV F ++ I V L+
Sbjct: 298 NVHPTKAEVKFQNDQEIYRLVYKALQNAF 326
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ I+V ++ GG+ L++I DNG GI K+D++I R TTSK+ +DL +I T GFRGEA
Sbjct: 40 ASIIEVEIENGGISLIKITDNGHGIEKDDVEIAFLRHTTSKIKNEDDLYNIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI V+ + +ITKTK + ++ D I+ C GT II +DLFYN P R
Sbjct: 100 LASICAVSKVEMITKTKDDLTGTKIYIEGGEIIDKIE-CGAPDGTTIIVKDLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
K LK PS E ++++V A+ ++ F K
Sbjct: 159 KFLKTPSREAMIVSEIVQSLALSKENISFKYK 190
>gi|386014169|ref|YP_005932446.1| protein MutL [Pseudomonas putida BIRD-1]
gi|313500875|gb|ADR62241.1| MutL [Pseudomonas putida BIRD-1]
Length = 632
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLKVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICG 221
>gi|398946431|ref|ZP_10672056.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM41(2012)]
gi|398154957|gb|EJM43416.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM41(2012)]
Length = 636
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++TK + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTKEADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++TK + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTKEADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|431804718|ref|YP_007231621.1| DNA mismatch repair protein [Pseudomonas putida HB3267]
gi|430795483|gb|AGA75678.1| DNA mismatch repair protein [Pseudomonas putida HB3267]
Length = 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEARDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEARDETARARRVGAICG 221
>gi|408372535|ref|ZP_11170235.1| DNA mismatch repair protein [Alcanivorax hongdengensis A-11-3]
gi|407767510|gb|EKF75947.1| DNA mismatch repair protein [Alcanivorax hongdengensis A-11-3]
Length = 610
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 158/314 (50%), Gaps = 41/314 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD + N+IAAGEV++RPA+ LKELLEN+LDA + SI V V+QGG KL++++DNG
Sbjct: 3 KIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGAESITVDVEQGGTKLVRVRDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI ++D+ + R TSK+ EDL +I T GFRGEALA+IS V+ LT+ + +
Sbjct: 63 GIERDDLPLALSRHATSKIRGLEDLEAIGTLGFRGEALAAISSVSRLTLSSNVEGEAEGW 122
Query: 120 ------------TSPCAY-RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
+P A+ R T + ++L+ +K + EE +R +
Sbjct: 123 QVQVEGRDMAPTVTPAAHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEV--FRRIA 180
Query: 167 ----HTLVPLMKSQ---YQPSEKIVERACLLEIASLNNL----ELLSVEGTDDAFQLKVT 215
+T L +Q +Q + + +A L + ++V+ D +L
Sbjct: 181 LSEFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFMEQAIAVDVERDGIRLH-- 238
Query: 216 GWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ FS + F N + + Q Y+ L G P L L +DP
Sbjct: 239 GWMGLPTFSRSQADLQYFYVNGRVIRDKVVNHAVRQAYADVLYHGRHPAYVLFLELDPAM 298
Query: 269 VDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 299 VDVNVHPTKHEVRF 312
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L + SI V V+QGG KL++++DNG GI ++D+ +
Sbjct: 20 VVERPASVLKELL-----ENALDAGAESITVDVEQGGTKLVRVRDNGGGIERDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +I T GFRGEALA+IS V+ LT+ + + ++ +
Sbjct: 75 RHATSKIRGLEDLEAIGTLGFRGEALAAISSVSRLTLSSNVEGEAEGWQVQVEGRDMAPT 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ P A +GT + DLF+N P RR+ L+ E+N + +V R A+ + F L
Sbjct: 135 VTPAAHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALSEFNTAFRL 190
>gi|352104377|ref|ZP_08960343.1| DNA mismatch repair protein [Halomonas sp. HAL1]
gi|350598843|gb|EHA14945.1| DNA mismatch repair protein [Halomonas sp. HAL1]
Length = 644
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 40/315 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I LD + N+IAAGEV++RP++ KEL+EN++DA S I+V ++QGG +L++++D+G
Sbjct: 6 PRIHVLDPRLANQIAAGEVVERPSSVTKELIENAIDAGSQRIEVEIEQGGTRLIKVRDDG 65
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +ED+ + R TSK+ EDL +S+ GFRGEALASIS V+ L +I+ + P
Sbjct: 66 IGIGEEDLPLALARHATSKIGSLEDLEGVSSLGFRGEALASISSVSRLELISNAEEDP-R 124
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPL 172
+ W A + + + + + D + EK + VE
Sbjct: 125 HGWRVVAEGRGMDARVTPAPHPRGTSVGVRDLFFNTPARRKFLRTEKTEFAHVEEAFRRQ 184
Query: 173 MKSQY------QPSEKIVERACLLEIASLNNLELLSVEGTD----------DAFQLKVTG 216
S+Y + ++K++ + A+ + S+ G + +A L+++G
Sbjct: 185 ALSRYDIAWVLRHNQKVIHQLPPGHSAAARERRIASLLGKNFIEHARYIEREAGGLRLSG 244
Query: 217 WI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
W+ T+ + F F+N + R + Q Y L G P L L +DP
Sbjct: 245 WVGLPTHSRSQADQQYF--FVNGRVVRDRLVAHAVRQAYRDVLFNGRHPVFVLYLELDPD 302
Query: 268 NVDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 303 VVDVNVHPTKHEVRF 317
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I+V ++QGG +L++++D+G GI +ED+ + R TSK+ EDL +S+ GFRGEA
Sbjct: 44 SQRIEVEIEQGGTRLIKVRDDGIGIGEEDLPLALARHATSKIGSLEDLEGVSSLGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSP-CAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L +I+ + P +R + + P +GT + DLF+N P R
Sbjct: 104 LASISSVSRLELISNAEEDPRHGWRVVAEGRGMDARVTPAPHPRGTSVGVRDLFFNTPAR 163
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYG 490
RK L+ E+ + + R A+ + + L+ + + + +++ E I ++ G
Sbjct: 164 RKFLRTEKTEFAHVEEAFRRQALSRYDIAWVLRHNQKVIHQLPPGHSAAARERRIASLLG 223
Query: 491 NNISRRVR 498
N R
Sbjct: 224 KNFIEHAR 231
>gi|398846726|ref|ZP_10603685.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM84]
gi|398252289|gb|EJN37487.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM84]
Length = 632
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 163/336 (48%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASAGEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSVEGTDD--------------AFQ------------ 211
++ R L N +LS+ D F
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASAGEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICG 221
>gi|339489622|ref|YP_004704150.1| DNA mismatch repair protein [Pseudomonas putida S16]
gi|338840465|gb|AEJ15270.1| DNA mismatch repair protein [Pseudomonas putida S16]
Length = 631
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICG 221
>gi|325271237|ref|ZP_08137782.1| DNA mismatch repair protein [Pseudomonas sp. TJI-51]
gi|324103640|gb|EGC00942.1| DNA mismatch repair protein [Pseudomonas sp. TJI-51]
Length = 632
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D++ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRDMLP--------RVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSVEGTDDAFQ-------------------------- 211
++ R L N +LS+ D
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDEVARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 119/208 (57%), Gaps = 14/208 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDVEVEQGGVKLLKVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAWQVETEGRDMLPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIRTNVNSSHSEV-----IGNIYG 490
+++ +++ +H EV +G I G
Sbjct: 198 KSI----LSLHEAHDEVARARRVGAICG 221
>gi|330807229|ref|YP_004351691.1| DNA mismatch repair protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423695059|ref|ZP_17669549.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens Q8r1-96]
gi|327375337|gb|AEA66687.1| DNA mismatch repair protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388008662|gb|EIK69913.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens Q8r1-96]
Length = 637
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGG 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MASRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVGAVCGAGFLEQALPIEVERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPAVVDVNVHPTKHEVRF 320
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 28 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGGGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAWQVETEGRDMASR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+ + + + +++ + +G + G
Sbjct: 203 KTILSLHEAHDDAARARRVGAVCG 226
>gi|417850856|ref|ZP_12496677.1| DNA mismatch repair protein [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338220285|gb|EGP05825.1| DNA mismatch repair protein [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 617
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLMRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY---RTVEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E Y + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANYFLTTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAIAFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLNYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 89/151 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLMRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + + F P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANYFLTTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFTL 189
>gi|421523718|ref|ZP_15970347.1| DNA mismatch repair protein [Pseudomonas putida LS46]
gi|402752704|gb|EJX13209.1| DNA mismatch repair protein [Pseudomonas putida LS46]
Length = 632
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I + V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 177
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 178 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 298 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 333
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I + V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 78 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 197
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 198 KSILSLHEAHDETARARRVGAICG 221
>gi|83648044|ref|YP_436479.1| DNA mismatch repair protein [Hahella chejuensis KCTC 2396]
gi|83636087|gb|ABC32054.1| DNA mismatch repair enzyme (predicted ATPase) [Hahella chejuensis
KCTC 2396]
Length = 612
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 156/311 (50%), Gaps = 35/311 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI L + N+IAAGEV++RP++ +KEL+EN+LDA + I+V ++ GG+KL++I+D+G
Sbjct: 3 KIHLLSPRLANQIAAGEVVERPSSVVKELVENALDAGARKIEVDIENGGVKLIRIRDDGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT--------- 116
GI +ED+ + R TSK+ EDL +++T GFRGEALASI V+ L + +
Sbjct: 63 GIPREDLPLALSRHATSKIETLEDLEAVATLGFRGEALASICSVSRLALTSRPQNQGEAW 122
Query: 117 ---------KTKTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE---KQWY 162
K + SP A+ T + DL ++++ +K + G EE +Q
Sbjct: 123 KVEVEGREMKPEISPAAHTPGTTVEVRDLF-YNTPARRKFMRTEKTEFGHIEEIIKRQAL 181
Query: 163 R--TVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELL--SVEGTDDAFQLKVTGWI 218
+V TL K +Q E + I L + ++ A L +TGW+
Sbjct: 182 GRLSVAFTLRHNQKVVHQLRPAASEEDHIRRIGQLCGANFIESAIPINVSASGLSLTGWV 241
Query: 219 TNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
FS + F+N + R + Q Y L G P L L +DP VDV
Sbjct: 242 AKPTFSRSQADLQYFFVNGRVIRDKLVAHAVRQAYQDVLYHGRHPAFVLYLELDPATVDV 301
Query: 272 NVHPTKHEVHF 282
NVHPTKHEV F
Sbjct: 302 NVHPTKHEVRF 312
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I+V ++ GG+KL++I+D+G GI +ED+ + R TSK+ EDL +++T GFRGEALAS
Sbjct: 43 IEVDIENGGVKLIRIRDDGGGIPREDLPLALSRHATSKIETLEDLEAVATLGFRGEALAS 102
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
I V+ L + ++ + A++ ++K I P A GT + DLFYN P RRK +
Sbjct: 103 ICSVSRLALTSRPQNQGEAWKVEVEGREMKPEISPAAHTPGTTVEVRDLFYNTPARRKFM 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS-HSEVIGNIYGNN 492
+ E+ I +++ R A+ V FTL+ + + +R + H IG + G N
Sbjct: 163 RTEKTEFGHIEEIIKRQALGRLSVAFTLRHNQKVVHQLRPAASEEDHIRRIGQLCGAN 220
>gi|397695348|ref|YP_006533230.1| DNA mismatch repair protein mutL [Pseudomonas putida DOT-T1E]
gi|397332078|gb|AFO48437.1| DNA mismatch repair protein mutL [Pseudomonas putida DOT-T1E]
Length = 633
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I + V+QGG+KLL+++D+G+
Sbjct: 7 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 66
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 67 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 126
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 127 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 178
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 179 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 238
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 239 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 298
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 299 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 334
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I + V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 24 VVERPASVAKELLENSLDS-----GARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALA 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 79 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 138
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 139 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 198
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 199 KSILSLHEAHDETARARRVGAICG 222
>gi|148549974|ref|YP_001270076.1| DNA mismatch repair protein [Pseudomonas putida F1]
gi|148514032|gb|ABQ80892.1| DNA mismatch repair protein MutL [Pseudomonas putida F1]
Length = 633
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I + V+QGG+KLL+++D+G+
Sbjct: 7 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 66
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 67 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 126
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 127 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 178
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 179 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 238
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 239 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 298
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 299 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 334
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I + V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 24 VVERPASVAKELLENSLDS-----GARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALA 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 79 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 138
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 139 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 198
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 199 KSILSLHEAHDETARARRVGAICG 222
>gi|378948506|ref|YP_005205994.1| protein MutL [Pseudomonas fluorescens F113]
gi|359758520|gb|AEV60599.1| MutL [Pseudomonas fluorescens F113]
Length = 637
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGG 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MASRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVGAVCGAGFLEQALPIEVERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPAVVDVNVHPTKHEVRF 320
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 28 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGGGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T+ + A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAWQVETEGRDMASR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+ + + + +++ + +G + G
Sbjct: 203 KTILSLHEAHDDAARARRVGAVCG 226
>gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 638
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 172/332 (51%), Gaps = 41/332 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ LD+ +++IAAGEVI+RPA+ +KEL+EN++DA +T++ V +K+GG+ ++I DNG
Sbjct: 2 PNIQVLDQITIDKIAAGEVIERPASIVKELVENAIDANATAVTVEIKEGGISFIRITDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI KE++ + R +TSK+ +DL ++S+ GFRGEAL+SIS +A + +ITKTK +
Sbjct: 62 CGIPKEEVSLAFLRHSTSKIRSEKDLATVSSLGFRGEALSSISAIAQVEVITKTKENDFG 121
Query: 125 YRW------------------CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
++ T+L + ++L+ + E +
Sbjct: 122 VKYTIEGGVEKSIEEVGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASHVNELMVRLALS 181
Query: 167 HTLVPLM-----KSQYQPS-----EKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
H V + +S+ + + ++ EIA NNL +E D +++V+G
Sbjct: 182 HPEVSIQFINNGQSKLHTAGNGKVKDVIYHVFGREIA--NNL----LEVNRDEGKMRVSG 235
Query: 217 WI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+I N N+ + +N I + IE Y + + +PF L +D ++
Sbjct: 236 YIGKPLISRGNRNYENYYINGRYVKSNIIAKAIEDAYKDFTMQHKYPFTVLHFWLDGNDI 295
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
DVNVHPTK E+ F H + + V +++TL+
Sbjct: 296 DVNVHPTKMELRFSHRQEVYDFVYRAVKETLI 327
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 119/207 (57%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + +T++ V +K+GG+ ++I DNG GI KE++ +
Sbjct: 20 VIERPASIVKELV-----ENAIDANATAVTVEIKEGGISFIRITDNGCGIPKEEVSLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ +DL ++S+ GFRGEAL+SIS +A + +ITKTK + + + I+ ++
Sbjct: 75 RHSTSKIRSEKDLATVSSLGFRGEALSSISAIAQVEVITKTKENDFGVKYT-IEGGVEKS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+ GT + +FYN P RRK LK P E + + +++ R A+ +P V +++ N
Sbjct: 134 IEEVGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASHVNELMVRLALSHPEV--SIQFIN 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ + T N +VI +++G I+
Sbjct: 192 NGQSKLHTAGNGKVKDVIYHVFGREIA 218
>gi|395445739|ref|YP_006385992.1| DNA mismatch repair protein [Pseudomonas putida ND6]
gi|388559736|gb|AFK68877.1| DNA mismatch repair protein [Pseudomonas putida ND6]
Length = 633
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I + V+QGG+KLL+++D+G+
Sbjct: 7 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 66
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A+
Sbjct: 67 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 126
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 127 QVETEGRD--------MTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 178
Query: 183 IVERACLLEI-----ASLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L N +LS+ E D+ +
Sbjct: 179 VIRRLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNG 238
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 239 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEL 298
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P VDVNVHPTKHEV F ++ + + L + L
Sbjct: 299 EPNGVDVNVHPTKHEVRFREGRSVHDFLYGTLHRAL 334
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I + V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 24 VVERPASVAKELLENSLDS-----GARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALA 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T ++ A++ +
Sbjct: 79 RHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPR 138
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ VGF L+
Sbjct: 139 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNG 198
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+++ + + ++ + +G I G
Sbjct: 199 KSILSLHEAHDETARARRVGAICG 222
>gi|381150984|ref|ZP_09862853.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
gi|380882956|gb|EIC28833.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
Length = 609
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L +VN+IAAGEV++RP++ +KEL+ENS DA + I++ ++QGG +L++++D+G
Sbjct: 2 RIHLLPTQLVNQIAAGEVVERPSSVVKELVENSFDAGARQIRIDIEQGGARLIRVRDDGG 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ + R TSK+ DL +++ GFRGEAL SIS VA LT+I++T+ S CA+
Sbjct: 62 GIDKEDLPLALSRHATSKIATLADLEHVASMGFRGEALPSISSVARLTLISRTEGSDCAW 121
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
R +A E Q D G E + +Y T + K++++ +
Sbjct: 122 R--------VAADGTERDFDPQPDPHPRGTTVEVRDLFYNTPARRKFLKSEKTEFEHIQT 173
Query: 183 IVERACL--LEIA---SLNNLELLSVEGTD--------------DAF------------Q 211
+VER L +I + N E+L+++ + AF
Sbjct: 174 LVERMALSRFDIGFRLTHNQKEILNLKPAETPAEQEKRIAGICGSAFIDNCVKIDFASSG 233
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++TGW+ FS + F N + ++Q Y L G P L L +
Sbjct: 234 LELTGWVGLPTFSRSQPDMQFFYVNGRLIKDKLVAHAVKQAYQDVLYHGRQPVFVLYLAL 293
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVN HP K EV F + + + S L ++L
Sbjct: 294 DPALVDVNAHPAKLEVRFREGRLVHDFLFSALHRSL 329
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 6/205 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S F + I++ ++QGG +L++++D+G GI KED+ +
Sbjct: 19 VVERPSSVVKELVENS-----FDAGARQIRIDIEQGGARLIRVRDDGGGIDKEDLPLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ DL +++ GFRGEAL SIS VA LT+I++T+ S CA+R + ++
Sbjct: 74 RHATSKIATLADLEHVASMGFRGEALPSISSVARLTLISRTEGSDCAWRVAADGTERDFD 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+P +GT + DLFYN P RRK LK E+ I +V R A+ +GF L
Sbjct: 134 PQPDPHPRGTTVEVRDLFYNTPARRKFLKSEKTEFEHIQTLVERMALSRFDIGFRLTHNQ 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYGN 491
+ + +++ + E I I G+
Sbjct: 194 KEILNLKPAETPAEQEKRIAGICGS 218
>gi|398879990|ref|ZP_10635066.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM67]
gi|398887151|ref|ZP_10641979.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM60]
gi|398185801|gb|EJM73191.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM60]
gi|398194708|gb|EJM81773.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM67]
Length = 636
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|378774616|ref|YP_005176859.1| DNA mismatch repair protein [Pasteurella multocida 36950]
gi|356597164|gb|AET15890.1| DNA mismatch repair protein [Pasteurella multocida 36950]
Length = 617
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGNTLMRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ +S D+ Q L
Sbjct: 175 IRRIALAKMAIAFTLTHNGKIVRQYRSAHDRTQKLKRVSAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGNTLMRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFTL 189
>gi|398995239|ref|ZP_10698127.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM21]
gi|398130438|gb|EJM19776.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM21]
Length = 644
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|386833944|ref|YP_006239259.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
multocida str. 3480]
gi|385200645|gb|AFI45500.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
multocida str. 3480]
Length = 617
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLMRIHDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ +S D+ Q L
Sbjct: 175 IRRIALAKMAIAFTLTHNGKIVRQYRSAHDRSQKLKRVSAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLMRIHDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFTL 189
>gi|152978663|ref|YP_001344292.1| DNA mismatch repair protein [Actinobacillus succinogenes 130Z]
gi|171704301|sp|A6VN10.1|MUTL_ACTSZ RecName: Full=DNA mismatch repair protein MutL
gi|150840386|gb|ABR74357.1| DNA mismatch repair protein MutL [Actinobacillus succinogenes 130Z]
Length = 637
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 166/312 (53%), Gaps = 39/312 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGATLIRIRDNGFG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------- 119
I KE++ + R TSK+ +DL +I +FGFRGEALASIS V+ LT+ ++T
Sbjct: 63 IPKEELSLALARHATSKIATIDDLEAILSFGFRGEALASISSVSRLTLTSRTADQQEAWQ 122
Query: 120 -----------TSPCAYRWCTY--LADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT 164
+P ++ T +A+L + ++L+ DK + G +E ++
Sbjct: 123 VFVQGREQESTVNPASHPVGTTVEVANLF-FNMPARRKFLRTDKTEFGHIDEVIRRIALA 181
Query: 165 VEHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGW 217
H L + QY+ + + ++ L N+ + L ++ D L ++GW
Sbjct: 182 KSHIAFTLTHNGKIVRQYKSAVEDTQKLKRLAAICGNDFVRQALYIDWKHD--NLHLSGW 239
Query: 218 ITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T F+ ++ ++N I I Q Y+ +L +P L L ++P +VD
Sbjct: 240 VTTPTFARQQNDLSYCYVNGRMVKDKVINHAIRQAYAEHLGSERYPAFVLFLDLNPNDVD 299
Query: 271 VNVHPTKHEVHF 282
VNVHPTKHEV F
Sbjct: 300 VNVHPTKHEVRF 311
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ +DL +I +FGFRGEA
Sbjct: 39 ATRIQIDIENGGATLIRIRDNGFGIPKEELSLALARHATSKIATIDDLEAILSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ + + + P + GT + +LF+N+P RR
Sbjct: 99 LASISSVSRLTLTSRTADQQEAWQVFVQGREQESTVNPASHPVGTTVEVANLFFNMPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS-EVIGNIYGN 491
K L+ E+ I +V+ R A+ H+ FTL + + ++ V + + + I GN
Sbjct: 159 KFLRTDKTEFGHIDEVIRRIALAKSHIAFTLTHNGKIVRQYKSAVEDTQKLKRLAAICGN 218
Query: 492 NISRR 496
+ R+
Sbjct: 219 DFVRQ 223
>gi|398857634|ref|ZP_10613332.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM79]
gi|398240461|gb|EJN26138.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM79]
Length = 636
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGAGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|383310586|ref|YP_005363396.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871858|gb|AFF24225.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. HN06]
Length = 617
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ +S D+ Q L
Sbjct: 175 IRRIALAKMAIAFILTHNGKIVRQYRSAHDRSQKLKRVSAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLIRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + F L
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFIL 189
>gi|333601390|gb|AEF59014.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601392|gb|AEF59015.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
Length = 633
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 157/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++ P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MNEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|289672581|ref|ZP_06493471.1| DNA mismatch repair protein, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 399
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|385332242|ref|YP_005886193.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
gi|311695392|gb|ADP98265.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
Length = 630
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 57/318 (17%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L + N+IAAGEV++RPA+ +KEL+EN+LDA + + V V+QGG+KL++++D+G+GI +
Sbjct: 2 LSPRLANQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDDGSGIEE 61
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWCT 129
+D+ + R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T++ A R
Sbjct: 62 DDLPLALSRHATSKIASLDDLEAVASLGFRGEALASISSVSRLTLTSRTESQEAASR--- 118
Query: 130 YLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHTLVP 171
+ + EM + +G + EK + VE +
Sbjct: 119 -----VEVEGREMDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECVRR 173
Query: 172 LMKSQY----------------QPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQ 211
S++ +P+E ++R L ++N ++ E T
Sbjct: 174 QALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQQFIDNAVVIDAEATG---- 229
Query: 212 LKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F+N + R + Q Y L P L L +
Sbjct: 230 LRLWGWVALPTFSRSQADLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHPAFVLYLEV 289
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 290 DPATVDVNVHPTKHEVRF 307
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+ V V+QGG+KL++++D+G+GI ++D+ + R TSK+ +DL ++++ GFRGEALAS
Sbjct: 38 VDVEVEQGGVKLIRVRDDGSGIEEDDLPLALSRHATSKIASLDDLEAVASLGFRGEALAS 97
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T++ A R ++ I P A GT + DLF+N P RRK L
Sbjct: 98 ISSVSRLTLTSRTESQEAASRVEVEGREMDARISPAAHPVGTTVEVRDLFFNTPARRKFL 157
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYGNNI 493
+ E+N + + V R A+ GFTL+ + +R ++ E IG++ G
Sbjct: 158 RTEKTEFNHVEECVRRQALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQQF 216
>gi|398902508|ref|ZP_10651075.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM50]
gi|398178418|gb|EJM66068.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM50]
Length = 636
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGAGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|398841156|ref|ZP_10598381.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM102]
gi|398108977|gb|EJL98922.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM102]
Length = 636
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGAGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|399002326|ref|ZP_10705014.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM18]
gi|398125101|gb|EJM14590.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM18]
Length = 636
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGAGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|417853568|ref|ZP_12498932.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338219328|gb|EGP05006.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 617
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAISFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLIRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAISFTL 189
>gi|294669657|ref|ZP_06734724.1| hypothetical protein NEIELOOT_01558 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308570|gb|EFE49813.1| hypothetical protein NEIELOOT_01558 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 638
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 164/356 (46%), Gaps = 78/356 (21%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA + I+V + GG+K L ++DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGAAEIEVELDGGGIKRLLVRDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT---- 120
GI +D+ + R TSK+ DL +S+ GFRGE LASI+ V+ LT+ ++T
Sbjct: 62 GGIHADDLPLALSRHATSKIASLTDLEHVSSMGFRGEGLASIASVSRLTLTSRTPGSAHA 121
Query: 121 ----------SPCA--------------------------------YRWCTYLADLMALA 138
SP A Y C + + +ALA
Sbjct: 122 HEIRAEDGILSPVAAAAHPEGTTVEVADLFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
E + L+RD + + K +++E ++ S +Q +
Sbjct: 182 HPETAFSLKRDGKSV----FKYPPQSLEERAAAILGSDFQTAS----------------- 220
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMT-FLLFINNPIKR------MIEQVYSIYLP 251
L VEG + +++ G I F+ K F+N R ++Q Y L
Sbjct: 221 --LPVEGGGGS--MRLYGLIAKPTFAKGKTGQQYCFVNRRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
+ P L L + P+ VDVNVHPTK E+ F + + + V L+K L G+ R
Sbjct: 277 QALAPAFVLFLELPPEAVDVNVHPTKTEIRFRNSQAVHQLVFHTLDKALAGTRADR 332
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S + I+V + GG+K L ++DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGAAEIEVELDGGGIKRLLVRDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +S+ GFRGE LASI+ V+ LT+ ++T S A+
Sbjct: 65 HADDLPLALSRHATSKIASLTDLEHVSSMGFRGEGLASIASVSRLTLTSRTPGSAHAHEI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D L P+ A +GT + DLF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 RAEDGILS-PVAAAAHPEGTTVEVADLFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENL 470
F+LK+ +++
Sbjct: 184 ETAFSLKRDGKSV 196
>gi|425063592|ref|ZP_18466717.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
gallicida X73]
gi|404382707|gb|EJZ79165.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
gallicida X73]
Length = 617
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLMRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAISFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQSDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLMRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAISFTL 189
>gi|386288025|ref|ZP_10065191.1| DNA mismatch repair protein [gamma proteobacterium BDW918]
gi|385279004|gb|EIF42950.1| DNA mismatch repair protein [gamma proteobacterium BDW918]
Length = 620
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 167/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD + N+IAAGEV++RPA+ +KELLENSLDA + I++ +++GG+KL++++D+G
Sbjct: 3 KIRLLDPRLANQIAAGEVVERPASVVKELLENSLDAGARRIELDIEEGGVKLIRVRDDGA 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + R TSK++ EDL S+++ GFRGEALASIS V+ L + T + S +
Sbjct: 63 GIAEDDLPLALSRHATSKISVLEDLESVASLGFRGEALASISSVSRLCLSTAQEGSASGW 122
Query: 126 RWCTYLADL---MALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEK 182
+ D+ +A ++ +++ RT K+++ E+
Sbjct: 123 SARSEGRDMETVLAPVGHPRGTTVEVRDLFFNTPARRKFLRT--------EKTEFNHLEE 174
Query: 183 IVERACLLE-------------IASL----NNLE----LLSVEGT----------DDAFQ 211
+V+R L + SL N LE L SV G +A
Sbjct: 175 VVKRQALSRYDVGFSLRHNGRAVHSLKPADNQLEQERRLASVCGPAFMEQALYIDREAMG 234
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ +FS + F N + + Q Y L G P L L +
Sbjct: 235 LRLWGWVALPSFSRSQADLQHFYVNGRYVRDRLVVHAVRQAYRDVLFHGRHPAFVLYLEL 294
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P VDVNVHPTKHEV F T+ + + L K L
Sbjct: 295 APAAVDVNVHPTKHEVRFRDGRTVHDFIFRTLHKVL 330
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 110/196 (56%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + I++ +++GG+KL++++D+G GI ++D+ +
Sbjct: 20 VVERPASVVKELLENS-----LDAGARRIELDIEEGGVKLIRVRDDGAGIAEDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL S+++ GFRGEALASIS V+ L + T + S + A ++
Sbjct: 75 RHATSKISVLEDLESVASLGFRGEALASISSVSRLCLSTAQEGSASGWSARSEGRDMETV 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P +GT + DLF+N P RRK L+ E+N + +VV R A+ VGF+L+
Sbjct: 135 LAPVGHPRGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQALSRYDVGFSLRHNG 194
Query: 468 ENLADIRTNVNSSHSE 483
+ ++ N E
Sbjct: 195 RAVHSLKPADNQLEQE 210
>gi|355643060|ref|ZP_09053069.1| DNA mismatch repair protein mutL [Pseudomonas sp. 2_1_26]
gi|354830060|gb|EHF14119.1| DNA mismatch repair protein mutL [Pseudomonas sp. 2_1_26]
Length = 633
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|338996998|ref|ZP_08635703.1| DNA mismatch repair protein [Halomonas sp. TD01]
gi|338766071|gb|EGP20998.1| DNA mismatch repair protein [Halomonas sp. TD01]
Length = 642
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 157/320 (49%), Gaps = 48/320 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I LD + N+IAAGEV++RP++ KEL+EN++DA S I+V ++QGG +L++++D+
Sbjct: 8 PTRIHVLDPRLANQIAAGEVVERPSSVTKELIENAIDAGSQRIEVEIEQGGARLIKVRDD 67
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT------- 116
G GI ++D+ + R TSK+ EDL +S+ GFRGEALASIS V+ L +I+
Sbjct: 68 GIGIGEQDLPLALARHATSKINSLEDLEGVSSLGFRGEALASISSVSRLELISNAEEDPR 127
Query: 117 ------------KTKTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEK--- 159
+ + +P + T +A DL ++L+ +K + EE
Sbjct: 128 QGWRVVAEGRGMEARVTPAPHPRGTSVAVRDLF-FNTPARRKFLRTEKTEFAHVEEAFRR 186
Query: 160 --------QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ 211
W +V + P+ + A LL + + + E A
Sbjct: 187 QALSRYDVAWVLRHNQKVVHQLPPGVTPAARERRIASLLGKNFIEHARYIERE----AGG 242
Query: 212 LKVTGWI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+++GW+ T+ + F F+N + R + Q Y L G P L L
Sbjct: 243 LRISGWVGLPTHSRSQADQQYF--FVNGRVVRDRLVAHAVRQAYRDVLYNGRHPVFVLYL 300
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHPTKHEV F
Sbjct: 301 ELDPDVVDVNVHPTKHEVRF 320
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I+V ++QGG +L++++D+G GI ++D+ + R TSK+ EDL +S+ GFRGEA
Sbjct: 47 SQRIEVEIEQGGARLIKVRDDGIGIGEQDLPLALARHATSKINSLEDLEGVSSLGFRGEA 106
Query: 373 LASISHVAHLTIITKTKTSP-CAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L +I+ + P +R ++ + P +GT + DLF+N P R
Sbjct: 107 LASISSVSRLELISNAEEDPRQGWRVVAEGRGMEARVTPAPHPRGTSVAVRDLFFNTPAR 166
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE-VIGNIYG 490
RK L+ E+ + + R A+ V + L+ + + + V + E I ++ G
Sbjct: 167 RKFLRTEKTEFAHVEEAFRRQALSRYDVAWVLRHNQKVVHQLPPGVTPAARERRIASLLG 226
Query: 491 NNISRRVR 498
N R
Sbjct: 227 KNFIEHAR 234
>gi|336432332|ref|ZP_08612167.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018669|gb|EGN48406.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 664
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 41/332 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I+ LD+ +++IAAGEVI+RPA+ +KEL+ENS+DAK+ S+ V ++ GG+ L+++ DNG
Sbjct: 2 PQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGISLIRVTDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI +ED+ R +TSK+ + EDL I++ GFRGEAL+SIS V +ITKTK
Sbjct: 62 SGIEREDIRNAFLRHSTSKIRKVEDLAHIASLGFRGEALSSISAVTRTELITKTKEDTFG 121
Query: 125 YRWC------------------TYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
R+ T+L + + ++L+ + G ++ +
Sbjct: 122 TRYVIEGGVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAGHVQDLLMRLALS 181
Query: 167 HTLVPL---------MKSQYQPSEKIVERACLLEIASLNNLEL-LSVEGTDDAFQLKVTG 216
H V M++ K V + A+ N +EL S++G L + G
Sbjct: 182 HPEVAFTFINNGQTKMRTSGNGKLKDVIYSIYGREAAANLIELDYSMDG------LVMKG 235
Query: 217 WI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++ N NF + N + + IE Y +L + FPFV + +D + +
Sbjct: 236 YLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDFLMQHKFPFVVIHFQVDGEKI 295
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
DVNVHPTK E+ F + + V + +TLL
Sbjct: 296 DVNVHPTKMEMRFQRQQDVYNIVYEGVHRTLL 327
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 115/203 (56%), Gaps = 8/203 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S ++ + S+ V ++ GG+ L+++ DNG+GI +ED+
Sbjct: 20 VIERPASIVKELVENSIDAK-----AASVTVEIQDGGISLIRVTDNGSGIEREDIRNAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ + EDL I++ GFRGEAL+SIS V +ITKTK R I+ ++
Sbjct: 75 RHSTSKIRKVEDLAHIASLGFRGEALSSISAVTRTELITKTKEDTFGTR-YVIEGGVEQS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ GT + LFYN+P RRK LK P E + D++ R A+ +P V FT N
Sbjct: 134 LEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAGHVQDLLMRLALSHPEVAFTFI--N 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYG 490
+RT+ N +VI +IYG
Sbjct: 192 NGQTKMRTSGNGKLKDVIYSIYG 214
>gi|212212503|ref|YP_002303439.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212]
gi|226723030|sp|B6J016.1|MUTL_COXB2 RecName: Full=DNA mismatch repair protein MutL
gi|212010913|gb|ACJ18294.1| MutL [Coxiella burnetii CbuG_Q212]
Length = 575
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 168/339 (49%), Gaps = 50/339 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 4 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL ++T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 64 IHPEDLVLALERHATSKIAKIDDLQDVTTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 124 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 176
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 177 RLALSHFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 236
Query: 215 TGWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N I + + Q Y L G P L L +DP
Sbjct: 237 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPA 296
Query: 268 NVDVNVHPTKHEVHFLH----EDTIIERVQSMLEKTLLG 302
VD+NVHPTKHEV F D +I V++ L +T G
Sbjct: 297 FVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQTKPG 335
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 20 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL ++T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 75 RHATSKIAKIDDLQDVTTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 135 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + ++ S E ++G+++
Sbjct: 194 KEIIHFKSATTISGQENRIKSILGDVF 220
>gi|398850033|ref|ZP_10606743.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM80]
gi|398249757|gb|EJN35135.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM80]
Length = 637
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDAEQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAAVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|154504381|ref|ZP_02041119.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149]
gi|153795310|gb|EDN77730.1| DNA mismatch repair domain protein [Ruminococcus gnavus ATCC 29149]
Length = 664
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 41/332 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I+ LD+ +++IAAGEVI+RPA+ +KEL+ENS+DAK+ S+ V ++ GG+ L+++ DNG
Sbjct: 2 PQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGISLIRVTDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+GI +ED+ R +TSK+ + EDL I++ GFRGEAL+SIS V +ITKTK
Sbjct: 62 SGIEREDIRNAFLRHSTSKIRKVEDLAHIASLGFRGEALSSISAVTRTELITKTKEDTFG 121
Query: 125 YRWC------------------TYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
R+ T+L + + ++L+ + G ++ +
Sbjct: 122 TRYVIEGGVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAGHVQDLLMRLALS 181
Query: 167 HTLVPL---------MKSQYQPSEKIVERACLLEIASLNNLEL-LSVEGTDDAFQLKVTG 216
H V M++ K V + A+ N +EL S++G L + G
Sbjct: 182 HPEVAFTFINNGQTKMRTSGNGKLKDVIYSIYGREAAANLIELDYSMDG------LVMKG 235
Query: 217 WI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++ N NF + N + + IE Y +L + FPFV + +D + +
Sbjct: 236 YLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDFLMQHKFPFVVIHFQVDGEKI 295
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
DVNVHPTK E+ F + + V + +TLL
Sbjct: 296 DVNVHPTKMEMRFQRQQDVYNIVYEGVHRTLL 327
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 115/203 (56%), Gaps = 8/203 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S ++ + S+ V ++ GG+ L+++ DNG+GI +ED+
Sbjct: 20 VIERPASIVKELVENSIDAK-----AASVTVEIQDGGISLIRVTDNGSGIEREDIRNAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ + EDL I++ GFRGEAL+SIS V +ITKTK R I+ ++
Sbjct: 75 RHSTSKIRKVEDLAHIASLGFRGEALSSISAVTRTELITKTKEDTFGTR-YVIEGGVEQS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ GT + LFYN+P RRK LK P E + D++ R A+ +P V FT N
Sbjct: 134 LEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAGHVQDLLMRLALSHPEVAFTFI--N 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYG 490
+RT+ N +VI +IYG
Sbjct: 192 NGQTKMRTSGNGKLKDVIYSIYG 214
>gi|398968825|ref|ZP_10682565.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM30]
gi|398143361|gb|EJM32238.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM30]
Length = 636
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 9 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 68
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 69 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 128
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 129 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 180
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 181 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 240
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 241 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 300
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 301 DPAAVDVNVHPTKHEVRF 318
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 26 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 81 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 141 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 200
Query: 468 ENL 470
+ +
Sbjct: 201 KTI 203
>gi|421156465|ref|ZP_15615911.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 14886]
gi|404519009|gb|EKA29798.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 14886]
Length = 633
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|424921116|ref|ZP_18344477.1| MutL [Pseudomonas fluorescens R124]
gi|404302276|gb|EJZ56238.1| MutL [Pseudomonas fluorescens R124]
Length = 636
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 9 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 68
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 69 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 128
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 129 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 180
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 181 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 240
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 241 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 300
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 301 DPAAVDVNVHPTKHEVRF 318
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 26 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 81 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 141 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 200
Query: 468 ENL 470
+ +
Sbjct: 201 KTI 203
>gi|15600139|ref|NP_253633.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAO1]
gi|218894041|ref|YP_002442910.1| DNA mismatch repair protein [Pseudomonas aeruginosa LESB58]
gi|254238339|ref|ZP_04931662.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa C3719]
gi|386061117|ref|YP_005977639.1| DNA mismatch repair protein [Pseudomonas aeruginosa M18]
gi|392986622|ref|YP_006485209.1| DNA mismatch repair protein [Pseudomonas aeruginosa DK2]
gi|416865084|ref|ZP_11915660.1| DNA mismatch repair protein [Pseudomonas aeruginosa 138244]
gi|418586312|ref|ZP_13150355.1| DNA mismatch repair protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594644|ref|ZP_13158424.1| DNA mismatch repair protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419751809|ref|ZP_14278219.1| DNA mismatch repair protein [Pseudomonas aeruginosa PADK2_CF510]
gi|420142142|ref|ZP_14649769.1| DNA mismatch repair protein [Pseudomonas aeruginosa CIG1]
gi|421163544|ref|ZP_15622251.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 25324]
gi|421183025|ref|ZP_15640492.1| DNA mismatch repair protein [Pseudomonas aeruginosa E2]
gi|421519510|ref|ZP_15966181.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAO579]
gi|424944262|ref|ZP_18360025.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa NCMG1179]
gi|451985427|ref|ZP_21933647.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 18A]
gi|20455148|sp|Q9HUL8.1|MUTL_PSEAE RecName: Full=DNA mismatch repair protein MutL
gi|226723040|sp|B7V209.1|MUTL_PSEA8 RecName: Full=DNA mismatch repair protein MutL
gi|9951226|gb|AAG08331.1|AE004907_9 DNA mismatch repair protein MutL [Pseudomonas aeruginosa PAO1]
gi|126170270|gb|EAZ55781.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa C3719]
gi|218774269|emb|CAW30086.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa LESB58]
gi|333601380|gb|AEF59009.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601382|gb|AEF59010.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601384|gb|AEF59011.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601386|gb|AEF59012.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601388|gb|AEF59013.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601394|gb|AEF59016.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601396|gb|AEF59017.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601398|gb|AEF59018.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|333601400|gb|AEF59019.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|334834618|gb|EGM13561.1| DNA mismatch repair protein [Pseudomonas aeruginosa 138244]
gi|346060708|dbj|GAA20591.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa NCMG1179]
gi|347307423|gb|AEO77537.1| DNA mismatch repair protein [Pseudomonas aeruginosa M18]
gi|375042842|gb|EHS35482.1| DNA mismatch repair protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375043318|gb|EHS35947.1| DNA mismatch repair protein [Pseudomonas aeruginosa MPAO1/P1]
gi|384401885|gb|EIE48238.1| DNA mismatch repair protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392322127|gb|AFM67507.1| DNA mismatch repair protein [Pseudomonas aeruginosa DK2]
gi|403245110|gb|EJY58939.1| DNA mismatch repair protein [Pseudomonas aeruginosa CIG1]
gi|404345429|gb|EJZ71781.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAO579]
gi|404528430|gb|EKA38523.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 25324]
gi|404540941|gb|EKA50321.1| DNA mismatch repair protein [Pseudomonas aeruginosa E2]
gi|451756948|emb|CCQ86170.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 18A]
gi|453046456|gb|EME94172.1| DNA mismatch repair protein [Pseudomonas aeruginosa PA21_ST175]
Length = 633
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|384428203|ref|YP_005637562.1| DNA mismatch repair protein MutL [Xanthomonas campestris pv.
raphani 756C]
gi|341937305|gb|AEL07444.1| DNA mismatch repair protein MutL [Xanthomonas campestris pv.
raphani 756C]
Length = 623
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 46/337 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E ++N+IAAGEV++RPA+ +KEL+EN+LDA +T + + +++GG++L++I+DNG G
Sbjct: 3 IRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNGGG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I E++ + R TSK+ +DL +++T GFRGEAL SI+ V+ T+ ++ + +
Sbjct: 63 IAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHGFA 122
Query: 127 W---CTYLADLMALA---------------LMEMSQYLQRDKEQIGDKEEKQWYRT---- 164
L ++M A + ++L+ ++ ++G EE W R+
Sbjct: 123 LQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEE--WLRSLALA 180
Query: 165 -------VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
V H P +Y+P + + + + L V+ + L++ GW
Sbjct: 181 RPDVELRVSHNGKP--SRRYKPGDLYSDARLGETLGEDFARQALRVDHS--GAGLRLHGW 236
Query: 218 ITNVNFSTKKM-TFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ ++S L++N + ++ Y L G P L L +DP VD
Sbjct: 237 VAQPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVD 296
Query: 271 VNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGS 303
VNVHP KHEV F L D + +Q L +T G+
Sbjct: 297 VNVHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGA 333
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + + +++GG++L++I+DNG GI E++ + R TSK+ +DL +++T GFRGEA
Sbjct: 39 ATRVDIDLEEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKIASLDDLETVATLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ T+ ++ + + +L + + P A GT + +LF+N+P RR
Sbjct: 99 LPSIASVSRFTLASRRPDAEHGFALQIEGGRLGE-VMPRAHAPGTTVEVRELFFNVPARR 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV-IGNIYGN 491
K L+ E I + + A+ P V L+ + R +S+ +G G
Sbjct: 158 KFLRAERTELGHIEEWLRSLALARPDV--ELRVSHNGKPSRRYKPGDLYSDARLGETLGE 215
Query: 492 NISRRVRR 499
+ +R+ R
Sbjct: 216 DFARQALR 223
>gi|296391786|ref|ZP_06881261.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAb1]
Length = 633
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|398911307|ref|ZP_10655433.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM49]
gi|398184447|gb|EJM71898.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM49]
Length = 636
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F + + + L + L
Sbjct: 302 DPTGVDVNVHPTKHEVRFREGRMVHDFLYGTLHRAL 337
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|15602769|ref|NP_245841.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431695|sp|P57886.1|MUTL_PASMU RecName: Full=DNA mismatch repair protein MutL
gi|12721220|gb|AAK02988.1| MutL [Pasteurella multocida subsp. multocida str. Pm70]
Length = 617
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAISFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLIRIRDNGIGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPATQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAISFTL 189
>gi|398985166|ref|ZP_10690943.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM24]
gi|399014702|ref|ZP_10716988.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM16]
gi|398110296|gb|EJM00203.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM16]
gi|398154483|gb|EJM42953.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM24]
Length = 637
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISGDDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAAVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISGDDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|440742867|ref|ZP_20922189.1| DNA mismatch repair protein [Pseudomonas syringae BRIP39023]
gi|440376718|gb|ELQ13381.1| DNA mismatch repair protein [Pseudomonas syringae BRIP39023]
Length = 648
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|77456749|ref|YP_346254.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1]
gi|77380752|gb|ABA72265.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1]
Length = 635
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 9 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 68
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 69 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 128
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 129 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 180
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 181 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 240
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 241 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 300
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 301 DPAAVDVNVHPTKHEVRF 318
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 26 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 81 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 141 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 200
Query: 468 ENL 470
+ +
Sbjct: 201 KTI 203
>gi|426407364|ref|YP_007027463.1| DNA mismatch repair protein MutL [Pseudomonas sp. UW4]
gi|426265581|gb|AFY17658.1| DNA mismatch repair protein MutL [Pseudomonas sp. UW4]
Length = 636
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPTGVDVNVHPTKHEVRF 319
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|66043837|ref|YP_233678.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae
B728a]
gi|63254544|gb|AAY35640.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. syringae
B728a]
Length = 648
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|398870919|ref|ZP_10626239.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM74]
gi|398207548|gb|EJM94297.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM74]
Length = 636
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPTGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|422639078|ref|ZP_16702508.1| DNA mismatch repair protein [Pseudomonas syringae Cit 7]
gi|330951472|gb|EGH51732.1| DNA mismatch repair protein [Pseudomonas syringae Cit 7]
Length = 648
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|443641302|ref|ZP_21125152.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. syringae
B64]
gi|443281319|gb|ELS40324.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. syringae
B64]
Length = 648
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|421170764|ref|ZP_15628689.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 700888]
gi|404522423|gb|EKA32926.1| DNA mismatch repair protein [Pseudomonas aeruginosa ATCC 700888]
Length = 633
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSETPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|399909451|ref|ZP_10778003.1| DNA mismatch repair protein [Halomonas sp. KM-1]
Length = 642
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 46/322 (14%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
+D +I+ LD + N+IAAGEV++RPA+ +KEL+EN++DA S I+V ++ GG +L+++
Sbjct: 4 IDATRRIRVLDPRLANQIAAGEVVERPASVVKELVENAIDAGSRRIEVELEAGGARLIRV 63
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT---- 116
+D+G+GI +ED+ + R TSK+ EDL +++ GFRGEALASIS V+ L ++
Sbjct: 64 RDDGSGIAEEDLPLALSRHATSKIASLEDLEGVASLGFRGEALASISSVSRLELVANVED 123
Query: 117 ---------------KTKTSPCAY-RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEK- 159
+ + +P + R + + ++L+ +K + G EE
Sbjct: 124 DPRGGWRVVAEGRQMEPRVTPAPHPRGTSVTVRDLFFNTPARRKFLRTEKTEYGHVEEAF 183
Query: 160 ----------QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDA 209
W V + + P+ + A LL + L+N L + A
Sbjct: 184 RRLALSRYDITWVLRHNQKTVHQLPAGDDPTRRERRIAALLGKSFLDNALHLDLA----A 239
Query: 210 FQLKVTGWI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYL 260
L++ GW+ T+ + F F+N + R I Q Y L G P L
Sbjct: 240 GGLRLWGWVGLPTHSRAQADQQYF--FVNGRVVRDRLVAHAIRQAYRDVLFHGRHPVFVL 297
Query: 261 SLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 298 YLEVDPTVVDVNVHPTKHEVRF 319
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I+V ++ GG +L++++D+G+GI +ED+ + R TSK+ EDL +++ GFRGEA
Sbjct: 46 SRRIEVELEAGGARLIRVRDDGSGIAEEDLPLALSRHATSKIASLEDLEGVASLGFRGEA 105
Query: 373 LASISHVAHLTIITKTKTSP-CAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L ++ + P +R +++ + P +GT + DLF+N P R
Sbjct: 106 LASISSVSRLELVANVEDDPRGGWRVVAEGRQMEPRVTPAPHPRGTSVTVRDLFFNTPAR 165
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RK L+ EY + + R A+ + + L+ + + + G+
Sbjct: 166 RKFLRTEKTEYGHVEEAFRRLALSRYDITWVLRHNQKTVHQLPA--------------GD 211
Query: 492 NISRRVRRFSS 502
+ +RR RR ++
Sbjct: 212 DPTRRERRIAA 222
>gi|422673821|ref|ZP_16733178.1| DNA mismatch repair protein [Pseudomonas syringae pv. aceris str.
M302273]
gi|330971552|gb|EGH71618.1| DNA mismatch repair protein [Pseudomonas syringae pv. aceris str.
M302273]
Length = 648
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|398889686|ref|ZP_10643465.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM55]
gi|398189134|gb|EJM76417.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM55]
Length = 636
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKSEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F + + + L + L
Sbjct: 302 DPTGVDVNVHPTKHEVRFREGRMVHDFLYGTLHRAL 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKSEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|398951836|ref|ZP_10674346.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM33]
gi|398155809|gb|EJM44240.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM33]
Length = 636
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPTGVDVNVHPTKHEVRF 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|424065752|ref|ZP_17803226.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408003032|gb|EKG43249.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 648
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|189030396|sp|A9KE32.1|MUTL_COXBN RecName: Full=DNA mismatch repair protein MutL
Length = 574
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 63 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 123 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 175
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 176 RLALSHFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 235
Query: 215 TGWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N I + + Q Y L G P L L +DP
Sbjct: 236 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPA 295
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 296 FVDINVHPTKHEVRF 310
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 19 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 74 RHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 134 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 192
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + ++ S E ++G+++
Sbjct: 193 KEIIHFKSATTISGQENRIKSILGDVF 219
>gi|398925252|ref|ZP_10661768.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM48]
gi|398172292|gb|EJM60162.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM48]
Length = 636
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 49/336 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKSEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
++ R L ++A N +LS+ E DDA +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F + + + L + L
Sbjct: 302 DPTGVDVNVHPTKHEVRFREGRMVHDFLYGTLHRAL 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKSEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|398973173|ref|ZP_10684206.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM25]
gi|398143496|gb|EJM32371.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM25]
Length = 635
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 9 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 68
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 69 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 128
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 129 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 180
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 181 VIKRLALARFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNG 240
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ F+ + F N + + Q Y L G P L +
Sbjct: 241 LHLWGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEV 300
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 301 DPAAVDVNVHPTKHEVRF 318
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 26 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 81 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 141 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 200
Query: 468 ENL 470
+ +
Sbjct: 201 KTI 203
>gi|239623995|ref|ZP_04667026.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522026|gb|EEQ61892.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 786
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 159/328 (48%), Gaps = 55/328 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LD+ +N+IAAGEVI+RPA+ +KELLEN++DA++T++ + +K GG ++++ DNG+G
Sbjct: 4 ITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMIRVTDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+ + + R TSK+ EDL ++S+ GFRGEALASI+ VA + +ITKT S R
Sbjct: 64 IAKDQIALAFLRHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTSDSLTGTR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY-RTVEHTLVPLMKSQYQPSEKIVE 185
+ ++ +++ E+IG E R + + K P +
Sbjct: 124 Y-------------QIEGGMEKGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAH 170
Query: 186 RACLLEIASL-----------NNLELLSVEGTDD-------AFQLKVTGWITNVNFSTKK 227
A L+E +L NN L G + F ++ + +V+F
Sbjct: 171 VAALVEKIALSHPDISIRFIQNNQNKLYTSGNHNLKDLIYTVFGREIAANLLSVDFEQPG 230
Query: 228 MTFLLFINNP-----------------------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
M FI P I + IE+ Y ++ + +PF L +
Sbjct: 231 MQVTGFIGKPVIARSNRNYENYFINGRYIRSNIISKAIEEAYKPFMMQHKYPFTMLHFTI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERV 292
P +DVNVHPTK E+ F +++ + V
Sbjct: 291 QPDTLDVNVHPTKMELRFSDGESVYKSV 318
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L Q+T++ + +K GG ++++ DNG+GI K+ + +
Sbjct: 20 VIERPASVVKELL-----ENAIDAQATAVTIEIKDGGCSMIRVTDNGSGIAKDQIALAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++S+ GFRGEALASI+ VA + +ITKT S R I+ ++
Sbjct: 75 RHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTSDSLTGTRYQ-IEGGMEKG 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IIA +LFYN P R+K LK P E +A +V + A+ +P + + N
Sbjct: 134 LEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAHVAALVEKIALSHPDISIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + ++I ++G I+
Sbjct: 194 QN--KLYTSGNHNLKDLIYTVFGREIA 218
>gi|331005105|ref|ZP_08328508.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989]
gi|330421074|gb|EGG95337.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989]
Length = 619
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK L + N+IAAGEV++RPA+ +KE+LENSLDA ++ I + ++ GG+K ++I+DNG
Sbjct: 3 KIKLLPPRLANQIAAGEVVERPASVIKEMLENSLDAGASRIDIDIENGGIKTMRIRDNGH 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + R TSK+ +DL ++ T GFRGEALAS+S V+ LT+ + S A
Sbjct: 63 GIDQDDLALALSRHATSKIYVLDDLEAVGTLGFRGEALASVSSVSRLTLTSSVNDS--AQ 120
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
W EMS L Q G E + ++ T + K+++ E+
Sbjct: 121 GWAAKAEG------QEMSTELTPAPHQQGTTVEVRDLFFNTPARRKFLRTEKTEFNRIEE 174
Query: 183 IVERACLLEI----------ASLNNLELLSVEGTDD---------AFQ------------ 211
+V+R L ++++L + E + AF
Sbjct: 175 VVKRLALANFDVTFELRHNQRTIHSLRAGTSEAEKNRRVAQICGPAFMENALTVDIERSG 234
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + ++Q YS L G P L L +
Sbjct: 235 LRLWGWVALPTFSRSQADLQHFYVNGRAIKDRLVSHAVKQAYSDVLYHGRHPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 295 DPATVDVNVHPTKHEVRF 312
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 5/193 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S ++ I + ++ GG+K ++I+DNG GI ++D+ +
Sbjct: 20 VVERPASVIKEMLENS-----LDAGASRIDIDIENGGIKTMRIRDNGHGIDQDDLALALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL ++ T GFRGEALAS+S V+ LT+ + S + A ++
Sbjct: 75 RHATSKIYVLDDLEAVGTLGFRGEALASVSSVSRLTLTSSVNDSAQGWAAKAEGQEMSTE 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P QGT + DLF+N P RRK L+ E+N+I +VV R A+ N V F L+
Sbjct: 135 LTPAPHQQGTTVEVRDLFFNTPARRKFLRTEKTEFNRIEEVVKRLALANFDVTFELRHNQ 194
Query: 468 ENLADIRTNVNSS 480
+ +R + +
Sbjct: 195 RTIHSLRAGTSEA 207
>gi|333902284|ref|YP_004476157.1| DNA mismatch repair protein mutL [Pseudomonas fulva 12-X]
gi|333117549|gb|AEF24063.1| DNA mismatch repair protein mutL [Pseudomonas fulva 12-X]
Length = 624
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M +I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I+V V+QGG+KLL++
Sbjct: 1 MSDVARIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGAKRIEVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIAADDLPLALARHATSKIRELEDLEQVMSMGFRGEALASISSVARLTLTSRTAG 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVET--------EGREMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ E DD +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKNVLTLHEANDDVSRARRVASVCSAGFLEQALPID 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLHLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLEIDPTAVDVNVHPTKHEVRF 315
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENSLDS-----GAKRIEVDVEQGGVKLLRVRDDGRGIAADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRELEDLEQVMSMGFRGEALASISSVARLTLTSRTAGAEQAWQVETEGREMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+N+
Sbjct: 198 KNV 200
>gi|409397111|ref|ZP_11248049.1| DNA mismatch repair protein [Pseudomonas sp. Chol1]
gi|409118271|gb|EKM94671.1| DNA mismatch repair protein [Pseudomonas sp. Chol1]
Length = 625
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 163/318 (51%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ +T I+V V+QGG+KLL+++D+G
Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGATRIEVDVEQGGVKLLRVRDDGC 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A+
Sbjct: 66 GIPADDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTVEAAEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T EM +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQE 177
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDD-------------AF------------Q 211
+++R L ++A N +L++ + +DD AF
Sbjct: 178 VIKRLALARFDVAFHLRHNGKGVLALHQASDDAARARRVAAVCGPAFLEQALPIEVERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLDV 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPAVVDVNVHPTKHEVRF 315
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 108/183 (59%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S +T I+V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GATRIEVDVEQGGVKLLRVRDDGCGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTVEAAEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KGV 200
>gi|387891745|ref|YP_006322042.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens A506]
gi|387161115|gb|AFJ56314.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens A506]
Length = 638
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENS+D+ + I V V+ GG+KLL+++D+G+
Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVELGGVKLLRVRDDGS 70
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+++ A+
Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAW 130
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 131 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 182
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 183 VIKRLALARFDVAFHLRHNGKTILSLHEANDDAARARRVAAVCGSGFLEQALPIEIERNG 242
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L +
Sbjct: 243 LRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 302
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 303 DPSVVDVNVHPTKHEVRF 320
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+ GG+KLL+++D+G+GI +D+ +
Sbjct: 28 VVERPASVIKELLENSIDS-----GAKRIDVDVELGGVKLLRVRDDGSGISSDDLPLALA 82
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+++ A++ +
Sbjct: 83 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQVETEGRDMAPR 142
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 143 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 202
Query: 468 ENL 470
+ +
Sbjct: 203 KTI 205
>gi|107104045|ref|ZP_01367963.1| hypothetical protein PaerPA_01005118 [Pseudomonas aeruginosa PACS2]
gi|116053095|ref|YP_793414.1| DNA mismatch repair protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|313109947|ref|ZP_07795875.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 39016]
gi|386063545|ref|YP_005978849.1| DNA mismatch repair protein [Pseudomonas aeruginosa NCGM2.S1]
gi|421177201|ref|ZP_15634857.1| DNA mismatch repair protein [Pseudomonas aeruginosa CI27]
gi|122256892|sp|Q02F72.1|MUTL_PSEAB RecName: Full=DNA mismatch repair protein MutL
gi|115588316|gb|ABJ14331.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310882377|gb|EFQ40971.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 39016]
gi|348032104|dbj|BAK87464.1| DNA mismatch repair protein [Pseudomonas aeruginosa NCGM2.S1]
gi|404529845|gb|EKA39865.1| DNA mismatch repair protein [Pseudomonas aeruginosa CI27]
Length = 633
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA S I V V+QGG+KLL++
Sbjct: 1 MSETPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
Length = 639
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 162/338 (47%), Gaps = 55/338 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I LD+ +N+IAAGEVI+RPA+ +KELLEN++DA++T++ V +K+GG L+++ DNG
Sbjct: 2 PNITVLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTSLIRVTDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI KE++ + R +TSK+ EDL ++S+ GFRGEALASI+ V+ + +ITKT
Sbjct: 62 CGIPKEEVSLAFLRHSTSKIKSVEDLFTVSSLGFRGEALASIAAVSQVELITKTSIGLTG 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY-RTVEHTLVPLMKSQYQPSEKI 183
R+ ++ +R E++G E + R + + K P +
Sbjct: 122 TRY-------------QIDGGQERSMEEVGAPEGTTFIARNLFYNTPARKKFLKTPMTEG 168
Query: 184 VERACLLEIASL-----------NNLELLSVEGTDD-------AFQLKVTGWITNVNFST 225
A L+E +L NN L G + F ++ + V
Sbjct: 169 AHVAELVEKLALSHPEVSIRFIQNNQNKLHTSGNHNLKDIVYTVFGREIAANLLEVTVKK 228
Query: 226 KKMTFLLFINNP-----------------------IKRMIEQVYSIYLPKGSFPFVYLSL 262
+++ +I P I R IE+ Y ++ + +PF L
Sbjct: 229 PEVSIHGYIGKPVISRGNRNYENYFINGRYIKSSIISRAIEEAYKPFMMQHKYPFTMLHF 288
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+DP+ +DVNVHPTK E+ F + I V + L
Sbjct: 289 SIDPEMLDVNVHPTKMELRFRDGEMIYHMVYQAVSSAL 326
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + +R +T++ V +K+GG L+++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELLENAIDAR-----ATAVTVEIKEGGTSLIRVTDNGCGIPKEEVSLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ EDL ++S+ GFRGEALASI+ V+ + +ITKT R ID +
Sbjct: 75 RHSTSKIKSVEDLFTVSSLGFRGEALASIAAVSQVELITKTSIGLTGTRYQ-IDGGQERS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IA +LFYN P R+K LK P E +A++V + A+ +P V + N
Sbjct: 134 MEEVGAPEGTTFIARNLFYNTPARKKFLKTPMTEGAHVAELVEKLALSHPEVSIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + +++ ++G I+
Sbjct: 194 QN--KLHTSGNHNLKDIVYTVFGREIA 218
>gi|372268150|ref|ZP_09504198.1| DNA mismatch repair protein [Alteromonas sp. S89]
Length = 634
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 158/325 (48%), Gaps = 59/325 (18%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+ L + N+IAAGEV++RPA+ +KELLENSLDA +T +++ + GG+K + ++DN
Sbjct: 2 PENIQLLSPRLANQIAAGEVVERPASVIKELLENSLDAGATRLEIDLDAGGVKRIMVRDN 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT------- 116
G GI KED+ + R TSK+ EDL +++T GFRGEALASIS VA LT+ +
Sbjct: 62 GKGIEKEDLHLALARHATSKIHALEDLEAVATLGFRGEALASISSVARLTMTSSRDESGK 121
Query: 117 -----------KTKTSPCAY-RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
+T+ +P A+ R T + ++L + EK +
Sbjct: 122 GWTVTAEGREMETQLAPAAHPRGTTVEVRDLFFNTPARRKFL---------RTEKTEFNR 172
Query: 165 VEHTLVPLMKSQYQPSEKI------------------VER--ACLLEIASLNNLELLSVE 204
V+ T+ L +++ S + +ER A L A + N + +E
Sbjct: 173 VDETIKRLALARFDVSFSLRHNGKGVHNLRGGTSRAEMERRVAQLCGPAFMQNALHIEME 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L++ GW+ FS + F N + + + ++ L G P
Sbjct: 233 RSG----LRLWGWVAEPAFSRSQADLQFFYVNGRAIRDRVVSHAVRRAFADVLYHGRHPA 288
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 289 FVLYLELDPAAVDVNVHPTKHEVRF 313
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 110/196 (56%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T +++ + GG+K + ++DNG GI KED+ +
Sbjct: 21 VVERPASVIKELLENS-----LDAGATRLEIDLDAGGVKRIMVRDNGKGIEKEDLHLALA 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +++T GFRGEALASIS VA LT+ + S + + +++
Sbjct: 76 RHATSKIHALEDLEAVATLGFRGEALASISSVARLTMTSSRDESGKGWTVTAEGREMETQ 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A +GT + DLF+N P RRK L+ E+N++ + + R A+ V F+L+
Sbjct: 136 LAPAAHPRGTTVEVRDLFFNTPARRKFLRTEKTEFNRVDETIKRLALARFDVSFSLRHNG 195
Query: 468 ENLADIRTNVNSSHSE 483
+ + ++R + + E
Sbjct: 196 KGVHNLRGGTSRAEME 211
>gi|209363988|ref|YP_001424550.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
gi|207081921|gb|ABS76590.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
Length = 575
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 4 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 64 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 124 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 176
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 177 RLALSHFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 236
Query: 215 TGWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N I + + Q Y L G P L L +DP
Sbjct: 237 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPA 296
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 297 FVDINVHPTKHEVRF 311
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 20 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 75 RHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 135 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + ++ S E ++G+++
Sbjct: 194 KEIIHFKSATTISGQENRIKSILGDVF 220
>gi|402700125|ref|ZP_10848104.1| DNA mismatch repair protein [Pseudomonas fragi A22]
Length = 632
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL++
Sbjct: 1 MNSSARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRG 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M+ +Q +G E + ++ T + K+++
Sbjct: 121 ADQAWQVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEF 172
Query: 178 QPSEKIVERACLLEIASLNNLE-----LLSV-EGTDD-------------AF-------- 210
+++++R L NL +L++ E DD AF
Sbjct: 173 DHLQEVIKRLALARFDVAFNLRHNGKTILNLHEAHDDTARARRVAAVCGAAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 293 LFFEVDPSVVDVNVHPTKHEVRF 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 121/225 (53%), Gaps = 19/225 (8%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GAKRIDVDVEQAGIKLLRVRDDGSGISSDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRGADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFNLRHNG 197
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALARKA 512
+ + N++ +H + + R RR ++ +A +A
Sbjct: 198 KTI----LNLHEAHDD----------TARARRVAAVCGAAFLEQA 228
>gi|392409783|ref|YP_006446390.1| DNA mismatch repair protein MutL [Desulfomonile tiedjei DSM 6799]
gi|390622919|gb|AFM24126.1| DNA mismatch repair protein MutL [Desulfomonile tiedjei DSM 6799]
Length = 588
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 170/331 (51%), Gaps = 37/331 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LDE V+NRIAAGEVI RP + +KEL+ENS+DAKST+I+V +++GG KL++++DNGT
Sbjct: 4 RIRVLDEGVINRIAAGEVIDRPFSVVKELVENSIDAKSTAIRVDIERGGKKLIRVRDNGT 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G+ +D + ER TSKLT +DL SI+T GFRGEALASI+ V+ L +IT ++
Sbjct: 64 GMSHDDAFLALERHATSKLTSEKDLISIATMGFRGEALASIASVSRLRLITCDESDEPGT 123
Query: 126 RWCTYLADLMAL--------ALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV------- 170
L L+E++ ++ +E +W + L+
Sbjct: 124 ELLVEGGVLRKAERIGSGRGTLVEVANLFYNVPVRLKFLKENRWESDLIDELITRFALAF 183
Query: 171 PLMKSQYQ----------PSEKIVERACLLEIASLNNLELLSVEGTDDAFQ-LKVTGWIT 219
P + Y P + +ER + + + ++ D AF+ ++V G +
Sbjct: 184 PHLGFTYSQDGRLKLDAPPVKSSIERVHTVYSREVRD----NLVAIDYAFKDVRVHGHVA 239
Query: 220 NVNFSTKKM-TFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ M + F+N + + + +S + +G +P L L M P+ VDVN
Sbjct: 240 KPPYVKSNMRSVFTFVNGRSVRDRLVNSAVMRAFSNLMERGRYPLAILFLEMPPEQVDVN 299
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
VHP K EV F + + + + + + L+G+
Sbjct: 300 VHPQKAEVRFRKPKVVSDAILNGVHEALMGA 330
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+ST+I+V +++GG KL++++DNGTG+ +D + ER TSKLT +DL SI+T GFRG
Sbjct: 39 AKSTAIRVDIERGGKKLIRVRDNGTGMSHDDAFLALERHATSKLTSEKDLISIATMGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASI+ V+ L +IT ++ L+ + +G +GT + +LFYN+P
Sbjct: 99 EALASIASVSRLRLITCDESDEPGTELLVEGGVLRKAERIGSG-RGTLVEVANLFYNVPV 157
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFT 462
R K LK+ E + I ++++R+A+ PH+GFT
Sbjct: 158 RLKFLKENRWESDLIDELITRFALAFPHLGFT 189
>gi|146294369|ref|YP_001184793.1| DNA mismatch repair protein [Shewanella putrefaciens CN-32]
gi|145566059|gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32]
Length = 641
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 214/433 (49%), Gaps = 67/433 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++ I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I
Sbjct: 1 MEKSMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+DNG+GI KE++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAE 120
Query: 121 SPCAYRWCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEK 159
A W Y + MA+ +M + ++L+ DK + +E
Sbjct: 121 QTEA--WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDE- 177
Query: 160 QWYR-------TVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGT 206
W + + TL K Y+P+ + E L + ++ + L +E
Sbjct: 178 -WLKRIALVRGDIHFTLTHNGKLVRNYRPA--VNESQYLQRLTQVSGRQFAEHALKIECQ 234
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINNPI--KRMIEQ-VYSIYLPKGSF--PFVYLS 261
D L+++G++ + + T ++N + R++ V + K P L
Sbjct: 235 HD--DLRLSGYLQSPWSTVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHKAEIEQPGYVLM 292
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEK------TLLGSNTSRVFY 310
L +DP VDVNVHP KHEV F H+ D I++ +QS LE+ T G+ T
Sbjct: 293 LEIDPHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPETA 351
Query: 311 TQSTSIQVTVKQGGL-KLLQIQDNGTGI-RKEDMDIVC---ERFTTSKLTQFEDLNSI-S 364
T ++ GL +L I D I R D V ERFT S +Q + + S+ S
Sbjct: 352 CMDTQCAKAIEPSGLFELASISDQTDKIERIRDASPVTASQERFTES--SQAQAVTSVRS 409
Query: 365 TFGFRGEALASIS 377
FG + A S++
Sbjct: 410 GFGIQKNAFGSMA 422
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI KE++ + R TSKL +DL +I +FGFRGEA
Sbjct: 43 ATRIDIEIDKGGSKLIKIRDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + I P A G+ I A DLF+N P RR
Sbjct: 103 LASISSVSRLTLTSRTAEQTEAWQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARR 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
+ LK E+ I + + R A+ + FTL + + + R VN S
Sbjct: 163 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKLVRNYRPAVNES 210
>gi|158424017|ref|YP_001525309.1| DNA mismatch repair protein [Azorhizobium caulinodans ORS 571]
gi|172047960|sp|A8I6D2.1|MUTL_AZOC5 RecName: Full=DNA mismatch repair protein MutL
gi|158330906|dbj|BAF88391.1| DNA mismatch repair protein [Azorhizobium caulinodans ORS 571]
Length = 625
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 168/342 (49%), Gaps = 40/342 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L +++RIAAGEV++RPA A+KEL+EN++DA +T I+V V GG ++++I DNG+G
Sbjct: 3 IRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY- 125
+ +++ + ER TSKL EDL +IST GFRGEAL SI VA L+I ++ K++P A+
Sbjct: 63 MSADELSLAVERHATSKLPT-EDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAFE 121
Query: 126 -----------RWCTY-------LADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRTV 165
R + DL A ++L+ D+ + + ++
Sbjct: 122 IRVEGGVVTPPRPAALNGGTRVEVRDLF-FATPARLKFLKSDRAEAAAAADVVRRLALAR 180
Query: 166 EHTLVPLMKSQYQP----SEKIVERACLLEIASLNNLE----LLSVEGTDDAFQLKVTGW 217
LM QP + + E +A + E L+ V G +L
Sbjct: 181 PDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG 240
Query: 218 ITNVNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ + + FL P++ + YS LP +P + L L +DP+ VDVN
Sbjct: 241 LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVN 300
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
VHP K EV F V+++L +TL + +RV T T
Sbjct: 301 VHPAKTEVRFRDGGN----VRALLVRTLTDALAARVPSTAGT 338
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V V GG ++++I DNG+G+ +++ + ER TSKL EDL +IST GFRGEA
Sbjct: 39 ATEIEVLVVGGGREMIRISDNGSGMSADELSLAVERHATSKLPT-EDLLAISTLGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI VA L+I ++ K++P A+ ++ + P +P A N GT++ DLF+ P R
Sbjct: 98 LPSIGAVARLSIASRPKSAPHAFEIR-VEGGVVTPPRPAALNGGTRVEVRDLFFATPARL 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K LK E ADVV R A+ P V FTL
Sbjct: 157 KFLKSDRAEAAAAADVVRRLALARPDVAFTL 187
>gi|304311527|ref|YP_003811125.1| DNA mismatch repair protein [gamma proteobacterium HdN1]
gi|301797260|emb|CBL45480.1| DNA mismatch repair enzyme (predicted ATPase) [gamma
proteobacterium HdN1]
Length = 646
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 158/316 (50%), Gaps = 45/316 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ LKELLEN+LDA +T I + V++GG+KL++++DNG+
Sbjct: 3 RIELLPPRLANQIAAGEVVERPASVLKELLENALDAGATRIDIDVEEGGVKLIRVRDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K++M + R TSK+ Q EDL + T GFRGEALASI+ V+ L + + +
Sbjct: 63 GIPKDEMPLALARHATSKIHQIEDLEGVVTLGFRGEALASIASVSRLQLSASDNENGTGW 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLM 173
R T D+ A++ + + + ++ D + EK + +E L
Sbjct: 123 RVETEGQDMA--AMVSATAHPRGTTLEVHDLFFNTPARRKFLRAEKTEFNHLEEVFRKLA 180
Query: 174 KSQYQ----------------PSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQLK 213
S ++ P+ +E+ A LL + N + V D L+
Sbjct: 181 LSHFETGFSLRHNGRNLHQLKPATSELEQDRRIASLLGSVFVENAVRVEVAIGD----LR 236
Query: 214 VTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ GW+ FS + F+N + R + Q Y L P L +DP
Sbjct: 237 LWGWMGLPTFSRAQADCQYFFVNGRVIRDKVVNHAVRQAYRDVLYHDRHPAYVLFFELDP 296
Query: 267 KNVDVNVHPTKHEVHF 282
+ VDVNVHPTKHEV F
Sbjct: 297 RMVDVNVHPTKHEVRF 312
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 10/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L +T I + V++GG+KL++++DNG+GI K++M +
Sbjct: 20 VVERPASVLKELL-----ENALDAGATRIDIDVEEGGVKLIRVRDNGSGIPKDEMPLALA 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ Q EDL + T GFRGEALASI+ V+ L + + +R +
Sbjct: 75 RHATSKIHQIEDLEGVVTLGFRGEALASIASVSRLQLSASDNENGTGWRVETEGQDMAAM 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A +GT + DLF+N P RRK L+ E+N + +V + A+ + GF+L+
Sbjct: 135 VSATAHPRGTTLEVHDLFFNTPARRKFLRAEKTEFNHLEEVFRKLALSHFETGFSLRHNG 194
Query: 468 ENLADIRTNVNSSHSE-----VIGNIYGNNISR 495
NL ++ + + ++G+++ N R
Sbjct: 195 RNLHQLKPATSELEQDRRIASLLGSVFVENAVR 227
>gi|256821741|ref|YP_003145704.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069]
gi|256795280|gb|ACV25936.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069]
Length = 586
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 169/328 (51%), Gaps = 33/328 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL V N+IAAGEV++RPA+ +KELLEN++DAK+ IQ+ +++GG +L+++ DNG G
Sbjct: 3 IHKLSPLVANQIAAGEVVERPASVVKELLENAIDAKADRIQIDIERGGTRLIRVTDNGEG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++++++ R TSK+ +DL +I T GFRGEALASIS VA L + ++ + +
Sbjct: 63 ISRDELELALARHATSKIEHSDDLKAIYTLGFRGEALASISSVAKLKLSSRPQAQDMGWS 122
Query: 127 WCTYLAD---------LMALALMEMSQ-YLQRDKEQIGDKEEKQWYRTVEHTL------V 170
D L A ++E+ + Q + E+ + +E T+
Sbjct: 123 AIAEGLDMQVKLQPQSLPAGTIVEVRDLFFNTPARQKFLRAERTEFVHIEETVKRIALGS 182
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTD---DAFQLKVT-------GWITN 220
P + + + K+V+R + + + S+ G +A +L T GW++
Sbjct: 183 PHVAITLRHNSKVVKRVPAAHNSEQHQQRIGSILGASFLREAIKLDSTIDATRLYGWLSP 242
Query: 221 VNF-STKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
V++ + + +F+N R I Q Y LP G P L L ++ VDVNV
Sbjct: 243 VDWHQSSSLGQYVFVNGRAVRDRTLNHAIRQAYHDRLPAGRMPAYVLYLELEASQVDVNV 302
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLL 301
HPTKHEV F + + + + +E+ LL
Sbjct: 303 HPTKHEVRFSNGRQVHDFMSHAVEEALL 330
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 119/216 (55%), Gaps = 6/216 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L ++ IQ+ +++GG +L+++ DNG GI ++++++
Sbjct: 19 VVERPASVVKELL-----ENAIDAKADRIQIDIERGGTRLIRVTDNGEGISRDELELALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I T GFRGEALASIS VA L + ++ + + A ++
Sbjct: 74 RHATSKIEHSDDLKAIYTLGFRGEALASISSVAKLKLSSRPQAQDMGWSAIAEGLDMQVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P + GT + DLF+N P R+K L+ E+ I + V R A+ +PHV TL+ +
Sbjct: 134 LQPQSLPAGTIVEVRDLFFNTPARQKFLRAERTEFVHIEETVKRIALGSPHVAITLRHNS 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYGNNISRRVRRFSS 502
+ + + NS H + IG+I G + R + S
Sbjct: 194 KVVKRVPAAHNSEQHQQRIGSILGASFLREAIKLDS 229
>gi|71738065|ref|YP_272865.1| DNA mismatch repair protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558618|gb|AAZ37829.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298160603|gb|EFI01625.1| DNA mismatch repair protein MutL [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 648
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTMLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTM 216
>gi|161830565|ref|YP_001596643.1| DNA mismatch repair protein [Coxiella burnetii RSA 331]
gi|81839061|sp|Q83CM9.1|MUTL_COXBU RecName: Full=DNA mismatch repair protein MutL
gi|189030397|sp|A9NCK3.1|MUTL_COXBR RecName: Full=DNA mismatch repair protein MutL
gi|161762432|gb|ABX78074.1| DNA mismatch repair protein MutL [Coxiella burnetii RSA 331]
Length = 574
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 157/315 (49%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 63 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 123 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 175
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 176 RLALSHFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 235
Query: 215 TGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N R + Q Y L G P L L +DP
Sbjct: 236 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPA 295
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 296 FVDINVHPTKHEVRF 310
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 19 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 74 RHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 134 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 192
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + ++ S E ++G+++
Sbjct: 193 KEIIHFKSATTISGQENRIKSILGDVF 219
>gi|349859114|gb|AEQ20594.1| DNA mismatch repair enzyme [uncultured bacterium CSLF42]
Length = 594
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 167/323 (51%), Gaps = 45/323 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PK++KL E+++ IAAGEV++RPA+ LKEL+ENSLDA + I + + G +++ D+G
Sbjct: 2 PKVQKLPESLIRLIAAGEVVERPASVLKELVENSLDAGARKIAIDLWGAGRSRIRVTDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ +ED + +R TSKL F+DL ++STFGFRGEAL SI+ V+ L + T+ + P A
Sbjct: 62 EGMTREDAEAALDRHATSKLKTFDDLYNLSTFGFRGEALPSIAAVSRLELTTRPQAQPTA 121
Query: 125 YRWCTYLADLMA-----------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVE 166
+R L++ + + ++ S++L+RD E + +T++
Sbjct: 122 WRLTLEGGRLLSSEAAGAPLGTTIDVQDLFFNTPARSKFLKRDS-----TERTRLLKTIQ 176
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNL-----ELLSVEGTDDAFQLKVT------ 215
+ ++ E ++ L ++ NL ++ + T++ + V
Sbjct: 177 EITLARPDVRF---EVCMDGKNLYTFSTAKNLGERVADVWGLSATENLVPIDVAQGPCTI 233
Query: 216 -GWITNV--NFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G++ + + TK + L P+++ + + Y +LP G P L + +DPK
Sbjct: 234 RGFVNAIPAHHPTKALQLLYVNQRPVQQRLLTHAVYEAYKEWLPVGRHPIFLLFITLDPK 293
Query: 268 NVDVNVHPTKHEVHFLHEDTIIE 290
VDVNVHPTK EV F E I +
Sbjct: 294 LVDVNVHPTKREVRFSDERAIYD 316
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ + S + I + + G +++ D+G G+ +ED + +
Sbjct: 20 VVERPASVLKELVENS-----LDAGARKIAIDLWGAGRSRIRVTDDGEGMTREDAEAALD 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL F+DL ++STFGFRGEAL SI+ V+ L + T+ + P A+R + +L
Sbjct: 75 RHATSKLKTFDDLYNLSTFGFRGEALPSIAAVSRLELTTRPQAQPTAWRLTLEGGRLLS- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ GT I +DLF+N P R K LK+ S E ++ + + P V F +
Sbjct: 134 SEAAGAPLGTTIDVQDLFFNTPARSKFLKRDSTERTRLLKTIQEITLARPDVRFEVCMDG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYG 490
+NL T N E + +++G
Sbjct: 194 KNLYTFSTAKNL--GERVADVWG 214
>gi|215919100|ref|NP_820082.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
gi|206583985|gb|AAO90596.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 575
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 157/315 (49%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 4 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 64 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 124 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 176
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 177 RLALSHFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 236
Query: 215 TGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N R + Q Y L G P L L +DP
Sbjct: 237 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPA 296
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 297 FVDINVHPTKHEVRF 311
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 20 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 75 RHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 135 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + ++ S E ++G+++
Sbjct: 194 KEIIHFKSATTISGQENRIKSILGDVF 220
>gi|345865668|ref|ZP_08817845.1| DNA mismatch repair protein MutL [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123239|gb|EGW53142.1| DNA mismatch repair protein MutL [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 606
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L ++N+IAAGEV++RPA+ KEL+ENSLDA +T I++ V+QGG+K +Q++DNG G
Sbjct: 8 IHTLPTQLINQIAAGEVVERPASVAKELIENSLDAGATRIEIEVEQGGIKRIQVRDNGVG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL I + GFRGEAL SIS V+ L + + S A+
Sbjct: 68 IHKDELTLALSRHATSKIASLDDLEQIHSMGFRGEALPSISSVSRLKL--ASLASGAAHG 125
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTVEHTLVPLMKSQYQPSE 181
W L + Q + ++ D +++ RT K+++ E
Sbjct: 126 WEVSGDGGDNLQAPVPAALPQGTRVEVVDLFFNTPARRKFLRT--------EKTEFGHIE 177
Query: 182 KIVERACL--LEIA---SLNNLELLSVEGTDD--------------------------AF 210
+V R L ++A N +LLS+ D
Sbjct: 178 TLVRRLALARFDVAFHLQHNRRQLLSLPACQDRRDQERRISDVMGGEFLKNALHIEHEVL 237
Query: 211 QLKVTGWITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
L+++GW+ +FS + F +NN + R I Q + L G P L L
Sbjct: 238 SLRLSGWVARPSFSRSQADMQFFYVNNRMVRDKLVTHAIRQAFQDVLYHGRHPAYVLFLE 297
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHPTKHEV F
Sbjct: 298 IDPSKVDVNVHPTKHEVRF 316
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++ V+QGG+K +Q++DNG GI K+++ + R TSK+ +DL I + GFRGEA
Sbjct: 44 ATRIEIEVEQGGIKRIQVRDNGVGIHKDELTLALSRHATSKIASLDDLEQIHSMGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L SIS V+ L + + + + S L+ P+ P A QGT++ DLF+N P R
Sbjct: 104 LPSISSVSRLKLASLASGAAHGWEVSGDGGDNLQAPV-PAALPQGTRVEVVDLFFNTPAR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADI-----RTNVNSSHSEVIG 486
RK L+ E+ I +V R A+ V F L+ L + R + S+V+G
Sbjct: 163 RKFLRTEKTEFGHIETLVRRLALARFDVAFHLQHNRRQLLSLPACQDRRDQERRISDVMG 222
Query: 487 NIYGNN 492
+ N
Sbjct: 223 GEFLKN 228
>gi|117924347|ref|YP_864964.1| DNA mismatch repair protein MutL [Magnetococcus marinus MC-1]
gi|117608103|gb|ABK43558.1| DNA mismatch repair protein MutL [Magnetococcus marinus MC-1]
Length = 632
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 176/356 (49%), Gaps = 55/356 (15%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P++++L ET+ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V +QGG +L+Q+ DNG
Sbjct: 7 PRVQQLPETLANQIAAGEVVERPASVIKELVENSIDAGASLIEVKAEQGGKRLMQVVDNG 66
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ +++ + R TSK+ EDL I+T GFRGEAL S+ VA L + T+ + +
Sbjct: 67 HGMSEDEASLALTRHATSKIHTAEDLFRIATLGFRGEALPSVGSVAQLELATRIEEN--- 123
Query: 125 YRWCTYLADLMALALMEMS-QYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKI 183
AD +AL +M + Q +R +G + + + +K+ + +I
Sbjct: 124 -------ADGVALTVMGGARQASKRLAMPVGTRVTVRNLFFNTPARLKFLKADRTEANQI 176
Query: 184 VERACLLEIA--------SLNNLE----------------LLSVEGTD-----------D 208
+E IA SLN E L +V G + D
Sbjct: 177 MELMQRFAIAYPHVGFKLSLNGKEVQHYRAVADESAYVERLGAVLGAEFIPNCMEINSGD 236
Query: 209 AFQLKVTGWITNVNFSTKKMTFL-LFINNPIKR------MIEQVYSIYLPKGSFPFVYLS 261
A Q++V GW+ + + + LF+N R + + Y +P+ FP L
Sbjct: 237 A-QMRVRGWVGLPTLNRGSASAMHLFVNGRWVRDKVVTAAVREAYRDLMPRERFPLTALF 295
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQ 317
+ +DP+ VDVNVHP K EV F H ++ ++ L + L G +R + +Q
Sbjct: 296 VQVDPEEVDVNVHPAKAEVRFRHGQSVYGLLRRTLAEVLHGMG-ARCYQASEAPLQ 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I+V +QGG +L+Q+ DNG G+ +++ + R TSK+ EDL I+T GFRGEAL S
Sbjct: 48 IEVKAEQGGKRLMQVVDNGHGMSEDEASLALTRHATSKIHTAEDLFRIATLGFRGEALPS 107
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
+ VA L + T+ + + A + + K A GT++ +LF+N P R K L
Sbjct: 108 VGSVAQLELATRIEENADGV-ALTVMGGARQASKRLAMPVGTRVTVRNLFFNTPARLKFL 166
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN-SSHSEVIGNIYG 490
K E N+I +++ R+A+ PHVGF L + + R + S++ E +G + G
Sbjct: 167 KADRTEANQIMELMQRFAIAYPHVGFKLSLNGKEVQHYRAVADESAYVERLGAVLG 222
>gi|410942680|ref|ZP_11374454.1| DNA mismatch repair protein MutL [Leptospira noguchii str.
2006001870]
gi|410782163|gb|EKR71180.1| DNA mismatch repair protein MutL [Leptospira noguchii str.
2006001870]
Length = 596
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 177/340 (52%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDAGATQVDVESKDGGLSLLRIVDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQNYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 RWCTY---------LADLMALALM------------EMSQYLQRDKEQIGD--------K 156
+ + + L+ ++ + + ++ + ++I D +
Sbjct: 123 KIRSVAGKISEQEEIPGLIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVITQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE+ NLE +
Sbjct: 183 EDVRFRLFQDGKEVFVLPTRENKKERIIDLFGENFRDHLLEV----NLERGGI------- 231
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
TG+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 232 --SATGYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKKEIRFLDEDGFNGFFLTLIQKELRSS 329
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRIVDNGTGIEPEDLEPALKRHATSKIQNYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ + K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKIRSVAGKISEQ-EEIPGLIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V A+ V F L + + + + T N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVITQALAREDVRFRLFQDGKEVFVLPTRENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|388544909|ref|ZP_10148194.1| DNA mismatch repair protein [Pseudomonas sp. M47T1]
gi|388276869|gb|EIK96446.1| DNA mismatch repair protein [Pseudomonas sp. M47T1]
Length = 632
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIELLSPRLANQIAAGEVVERPASVTKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 66 GIASDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 177
Query: 183 IVERACL--LEIA---SLNNLELLSVEGTDDAFQ-------------------------- 211
+++R L ++A N +LS+ +D
Sbjct: 178 VIKRLALARFDVAFHLRHNGKTILSLHEANDEIARARRVAAICGPGFLEQAMPIEIERNG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 238 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPTVVDVNVHPTKHEVRF 315
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 23 VVERPASVTKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGIASDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|120597490|ref|YP_962064.1| DNA mismatch repair protein [Shewanella sp. W3-18-1]
gi|120557583|gb|ABM23510.1| DNA mismatch repair protein MutL [Shewanella sp. W3-18-1]
Length = 641
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 214/433 (49%), Gaps = 67/433 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++ I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I
Sbjct: 1 MEKSMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+DNG+GI KE++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAE 120
Query: 121 SPCAYRWCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEK 159
A W Y + MA+ +M + ++L+ DK + +E
Sbjct: 121 QTEA--WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDE- 177
Query: 160 QWYR-------TVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGT 206
W + + TL K Y+P+ + E L + ++ + L +E
Sbjct: 178 -WLKRIALVRGDIHFTLTHNGKLVRNYRPA--VNEAQYLQRLTQVSGRQFAEHALKIECQ 234
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINNPI--KRMIEQ-VYSIYLPKGSF--PFVYLS 261
D L+++G++ + + T ++N + R++ V + K P L
Sbjct: 235 HD--DLRLSGYLQSPWSTVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHKAEIEQPGYVLM 292
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEK------TLLGSNTSRVFY 310
L +DP VDVNVHP KHEV F H+ D I++ +QS LE+ T G+ T
Sbjct: 293 LEIDPHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPEAA 351
Query: 311 TQSTSIQVTVKQGGL-KLLQIQDNGTGI-RKEDMDIVC---ERFTTSKLTQFEDLNSI-S 364
T ++ GL +L I D I R D V ERFT S +Q + + S+ S
Sbjct: 352 CMDTQCTKAIEPSGLFELASISDQTDKIERIRDASPVTASQERFTES--SQAQAVTSVRS 409
Query: 365 TFGFRGEALASIS 377
FG + A S++
Sbjct: 410 GFGIQKNAFGSMA 422
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI KE++ + R TSKL +DL +I +FGFRGEA
Sbjct: 43 ATRIDIEIDKGGSKLIKIRDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + I P A G+ I A DLF+N P RR
Sbjct: 103 LASISSVSRLTLTSRTAEQTEAWQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARR 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
+ LK E+ I + + R A+ + FTL + + + R VN +
Sbjct: 163 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKLVRNYRPAVNEA 210
>gi|422603937|ref|ZP_16675955.1| DNA mismatch repair protein, partial [Pseudomonas syringae pv. mori
str. 301020]
gi|330886597|gb|EGH20258.1| DNA mismatch repair protein [Pseudomonas syringae pv. mori str.
301020]
Length = 566
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QGETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQGETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|422619521|ref|ZP_16688210.1| DNA mismatch repair protein, partial [Pseudomonas syringae pv.
japonica str. M301072]
gi|330899890|gb|EGH31309.1| DNA mismatch repair protein, partial [Pseudomonas syringae pv.
japonica str. M301072]
Length = 423
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|407041179|gb|EKE40571.1| DNA mismatch repair protein, C-terminal domain containing protein
[Entamoeba nuttalli P19]
Length = 700
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 184/337 (54%), Gaps = 42/337 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK+LD+T +N+I AGEVIQRP N +KEL+ENS+DA +S+ +++ +GGL+ + + D+G
Sbjct: 2 KIKRLDQTTINKIGAGEVIQRPFNVVKELIENSIDAHCSSVIISIGKGGLESIVVTDDGC 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED+ ++ R+TTSK + + T+G+RGEAL+ +++V +TII++T TS Y
Sbjct: 62 GISLEDLKVLGGRYTTSKSIEGD------TYGYRGEALSCMTYVGKVTIISRTATSEIGY 115
Query: 126 R---------------WCTYLADLMALAL---------MEMSQYLQRDKEQIGDK--EEK 159
+ C+ ++ L M+ ++ ++ IGD +
Sbjct: 116 KVVFQNGQIIENPIPLACSIGTTVIVNNLFDKMLRKKSMKETEEYKKIISIIGDYAIHKA 175
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNN-LELLSVEGTDDAFQLKVTGWI 218
T+ + + + + I++ + +++N L+ S + + FQ+ ++
Sbjct: 176 NIAFTLRKAGTSVCEIKTEKHSTILKNISKIFTTNISNNLQQYSYQCLEPPFQM--ICYL 233
Query: 219 TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+N F KK + F+N+ +K++IE++Y YLPK ++ FVYLS+ ++ + +D N
Sbjct: 234 SNSTFQGKKNKMIFFVNDRFIEHIGLKKVIERIYDEYLPKVNY-FVYLSINVNKERIDCN 292
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
V+P+K + L E+ +I ++ L ++ + +R F
Sbjct: 293 VNPSKTAIRLLEEEKLINQIDKFLNSIIIEFSQTRSF 329
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 122/189 (64%), Gaps = 10/189 (5%)
Query: 314 TSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL 373
+S+ +++ +GGL+ + + D+G GI ED+ ++ R+TTSK + + T+G+RGEAL
Sbjct: 40 SSVIISIGKGGLESIVVTDDGCGISLEDLKVLGGRYTTSKSIEGD------TYGYRGEAL 93
Query: 374 ASISHVAHLTIITKTKTSPCAYRASYIDSKL-KDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
+ +++V +TII++T TS Y+ + + ++ ++PI P A + GT +I +LF + R+
Sbjct: 94 SCMTYVGKVTIISRTATSEIGYKVVFQNGQIIENPI-PLACSIGTTVIVNNLFDKM-LRK 151
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K++K+ +EEY KI ++ YA+H ++ FTL+K ++ +I+T +S+ + I I+ N
Sbjct: 152 KSMKE-TEEYKKIISIIGDYAIHKANIAFTLRKAGTSVCEIKTEKHSTILKNISKIFTTN 210
Query: 493 ISRRVRRFS 501
IS ++++S
Sbjct: 211 ISNNLQQYS 219
>gi|407801190|ref|ZP_11148034.1| DNA mismatch repair protein [Alcanivorax sp. W11-5]
gi|407024627|gb|EKE36370.1| DNA mismatch repair protein [Alcanivorax sp. W11-5]
Length = 610
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 37/312 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD + N+IAAGEV++RPA+ +KELLEN+LDA + I V V+QGG++L++++DNG+
Sbjct: 3 RIQLLDPRLANQIAAGEVVERPASVVKELLENALDAGAAHINVDVEQGGVRLVRVRDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + R TSK+ EDL +I + GFRGEALA+IS V+ LT+ + A
Sbjct: 63 GIPRDDLPLALSRHATSKIAAVEDLEAIGSLGFRGEALAAISSVSRLTLTSNDGAD--AE 120
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTLVPLM 173
W + ++ + + Q ++ D + EK + +E +
Sbjct: 121 GWQVLVEGRDMAPVVSPAAHPQGTTVEMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIA 180
Query: 174 KSQYQPS------EKIVER--------ACLLEIASLNNLELL--SVEGTDDAFQLKVTGW 217
S++ + +K+V + A + L + + SV +A L++ GW
Sbjct: 181 LSEFDTAFRLSHNQKVVHQLPVARDDAARAQRVGRLCGVAFMEQSVSVDIEAAGLRLHGW 240
Query: 218 ITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ FS + F +N + R + Q YS + G L L +DP VD
Sbjct: 241 VGLPTFSRAQADLQYFYVNGRVIRDKVVNHAVRQAYSDVMYHGRHAAYVLFLELDPALVD 300
Query: 271 VNVHPTKHEVHF 282
VNVHPTKHEV F
Sbjct: 301 VNVHPTKHEVRF 312
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L + I V V+QGG++L++++DNG+GI ++D+ +
Sbjct: 20 VVERPASVVKELL-----ENALDAGAAHINVDVEQGGVRLVRVRDNGSGIPRDDLPLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +I + GFRGEALA+IS V+ LT+ + ++ +
Sbjct: 75 RHATSKIAAVEDLEAIGSLGFRGEALAAISSVSRLTLTSNDGADAEGWQVLVEGRDMAPV 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ P A QGT + DLF+N P RR+ L+ E+N + +V R A+ F L
Sbjct: 135 VSPAAHPQGTTVEMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALSEFDTAFRL 190
>gi|291279564|ref|YP_003496399.1| DNA mismatch repair protein MutL [Deferribacter desulfuricans SSM1]
gi|290754266|dbj|BAI80643.1| DNA mismatch repair protein MutL [Deferribacter desulfuricans SSM1]
Length = 568
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 171/323 (52%), Gaps = 36/323 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI L + V N+IAAGEV++RP N +KEL+ENSLDA +T I++ + GGL L+++ DNG
Sbjct: 3 KINVLPDDVANKIAAGEVVERPFNVVKELVENSLDAGATKIEIELIDGGLSLIKVVDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK-------- 117
GI +ED+ + +RF TSK+T++ED+ SI++FGFRGEAL++IS V+ +I +K
Sbjct: 63 GIDEEDLPLTVQRFATSKITKYEDIFSINSFGFRGEALSAISSVSDFSIKSKGNELRVSF 122
Query: 118 ---TKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMK 174
SP AY T + + + E K+ + ++H + L+
Sbjct: 123 GNIISISPAAYTNGTIVTVKNLFEKVPARHKFLKSPTS----EYKEILKYIKH--IALL- 175
Query: 175 SQYQPSEKIVERACLLEIASLNNLELLSVE---GTDDAF-------QLKVTGWITNVNFS 224
Y S K++ + +N L V+ G D +F ++K++G +T +
Sbjct: 176 -NYNVSFKVINNGKVALNLINDNNLLDRVKKIIGEDYSFIELNFENKVKISGVVTTPDVQ 234
Query: 225 T-KKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
+K + L+ +NN I++ I Q Y LP+ +P L++ + P +DVNVHP K
Sbjct: 235 KFRKDSILIGVNNRAIKDNLIQQAILQAYHRKLPENRYPIAVLNIEISPDQIDVNVHPAK 294
Query: 278 HEVHFLHEDTIIERVQSMLEKTL 300
+ F + + + + V +E L
Sbjct: 295 LFIRFYNSNLLFKDVYKAVESCL 317
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++ + GGL L+++ DNG GI +ED+ + +RF TSK+T++ED+ SI++FGFRGEA
Sbjct: 40 ATKIEIELIDGGLSLIKVVDNGLGIDEEDLPLTVQRFATSKITKYEDIFSINSFGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L++IS V+ +I K+K + I S I P A GT + ++LF +P R
Sbjct: 100 LSAISSVSDFSI--KSKGNELRVSFGNIIS-----ISPAAYTNGTIVTVKNLFEKVPARH 152
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K LK P+ EY +I + A+ N +V F +
Sbjct: 153 KFLKSPTSEYKEILKYIKHIALLNYNVSFKV 183
>gi|376261286|ref|YP_005148006.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
gi|373945280|gb|AEY66201.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
Length = 665
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 165/321 (51%), Gaps = 53/321 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I LDE N+IAAGEV+++PA+ +KEL+ENS+DA +TSI V +K GG+ ++I DNG+
Sbjct: 3 RIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGISYIKITDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
G+ ++D++I ER TSK+ + EDL+S+ T GFRGEALASI+ VA + ++TKT S
Sbjct: 63 GMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEALASIASVASVELMTKTAASTYGM 122
Query: 123 ----------------CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
C + DL ++L++D + G +
Sbjct: 123 YVHIKGGVFQDVRQTGCPVGTTFIIKDLF-FNTPARYKFLKKDSTEAG---------YIS 172
Query: 167 HTLVPLMKSQYQPSEKIVE-RACLLEIASLNNL--------------ELLSVEGTDDAFQ 211
T+ + S K+ + L+ N+L +L++VE D+ +
Sbjct: 173 DTISRIALGNPDISFKLTNGKTTLIHTPGNNDLKSVIYSIYGKEIIKDLVAVEYADE--K 230
Query: 212 LKVTGWI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+K++G++ +N N+ + + + + +EQ +S L K FPF L++ +
Sbjct: 231 IKISGYVGKPEAARSNRNYQSLYINKRYVKSKLVSYSVEQAFSSILMKNRFPFFVLNIDI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHE 285
+P VD NVHP K EV F E
Sbjct: 291 NPVLVDANVHPAKTEVRFADE 311
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI V +K GG+ ++I DNG+G+ ++D++I ER TSK+ + EDL+S+ T GFRGEA
Sbjct: 40 ATSISVDIKNGGISYIKITDNGSGMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ VA + ++TKT S +I + ++ GT I +DLF+N P R
Sbjct: 100 LASIASVASVELMTKTAASTYGMYV-HIKGGVFQDVRQTGCPVGTTFIIKDLFFNTPARY 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK+ S E I+D +SR A+ NP + F L L I T N+ VI +IYG
Sbjct: 159 KFLKKDSTEAGYISDTISRIALGNPDISFKLTNGKTTL--IHTPGNNDLKSVIYSIYGKE 216
Query: 493 I 493
I
Sbjct: 217 I 217
>gi|345877908|ref|ZP_08829641.1| GTP-binding protein hflX [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225071|gb|EGV51441.1| GTP-binding protein hflX [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 619
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L ++N+IAAGEV++RPA+ KEL+ENSLDA +T I++ V+QGG+K +Q++DNG G
Sbjct: 21 IHTLPTQLINQIAAGEVVERPASVAKELIENSLDAGATRIEIEVEQGGIKRIQVRDNGVG 80
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL I + GFRGEAL SIS V+ L + + S A+
Sbjct: 81 IHKDELTLALSRHATSKIASLDDLEQIHSMGFRGEALPSISSVSRLKL--ASLASGAAHG 138
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTVEHTLVPLMKSQYQPSE 181
W L + Q + ++ D +++ RT K+++ E
Sbjct: 139 WEVSGDGGDNLQAPVPAALPQGTRVEVVDLFFNTPARRKFLRT--------EKTEFGHIE 190
Query: 182 KIVERACL--LEIA---SLNNLELLSVEGTDD--------------------------AF 210
+V R L ++A N +LLS+ D
Sbjct: 191 TLVRRLALARFDVAFHLQHNRRQLLSLPACQDRRDQERRISDVMGGEFLKNALHIEHEVL 250
Query: 211 QLKVTGWITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
L+++GW+ +FS + F +NN + R I Q + L G P L L
Sbjct: 251 SLRLSGWVARPSFSRSQADMQFFYVNNRMVRDKLVTHAIRQAFQDVLYHGRHPAYVLFLE 310
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHPTKHEV F
Sbjct: 311 IDPSKVDVNVHPTKHEVRF 329
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I++ V+QGG+K +Q++DNG GI K+++ + R TSK+ +DL I + GFRGEA
Sbjct: 57 ATRIEIEVEQGGIKRIQVRDNGVGIHKDELTLALSRHATSKIASLDDLEQIHSMGFRGEA 116
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L SIS V+ L + + + + S L+ P+ P A QGT++ DLF+N P R
Sbjct: 117 LPSISSVSRLKLASLASGAAHGWEVSGDGGDNLQAPV-PAALPQGTRVEVVDLFFNTPAR 175
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADI-----RTNVNSSHSEVIG 486
RK L+ E+ I +V R A+ V F L+ L + R + S+V+G
Sbjct: 176 RKFLRTEKTEFGHIETLVRRLALARFDVAFHLQHNRRQLLSLPACQDRRDQERRISDVMG 235
Query: 487 NIYGNN 492
+ N
Sbjct: 236 GEFLKN 241
>gi|440720730|ref|ZP_20901142.1| DNA mismatch repair protein [Pseudomonas syringae BRIP34876]
gi|440727815|ref|ZP_20908041.1| DNA mismatch repair protein [Pseudomonas syringae BRIP34881]
gi|440363220|gb|ELQ00390.1| DNA mismatch repair protein [Pseudomonas syringae BRIP34881]
gi|440365100|gb|ELQ02214.1| DNA mismatch repair protein [Pseudomonas syringae BRIP34876]
Length = 648
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|283797911|ref|ZP_06347064.1| DNA mismatch repair protein MutL [Clostridium sp. M62/1]
gi|291074378|gb|EFE11742.1| DNA mismatch repair domain protein [Clostridium sp. M62/1]
Length = 734
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 168/331 (50%), Gaps = 41/331 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD+ +N+IAAGEVI+RPA+ +KELLEN++DA++T++ + +K+GG+ L+++ DNG G
Sbjct: 4 IRVLDQNTINQIAAGEVIERPASVVKELLENAIDARATAVTIEIKEGGIGLIRVTDNGCG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +E++ R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT+ S R
Sbjct: 64 IPREEIPTAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTEDSMSGTR 123
Query: 127 WCTYLAD---LMALALMEMSQYLQR------------------DKEQIGDKEEK------ 159
+C + + + E + +L R + I D EK
Sbjct: 124 YCIDGGEEKSIEEVGAPEGTTFLVRNLFYNTPARRKFLKTPATEGAHIADLVEKISLSHP 183
Query: 160 -QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
R +++ L S I+ EIAS LL V+ +D ++VTG+I
Sbjct: 184 EVSIRFIQNGQSRLHTSGNHSLRDIIYTIYGREIAS----NLLPVDMGEDP--VRVTGFI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N NF + ++ I + IE Y ++ + +PF L ++ +DV
Sbjct: 238 GKPLIARGNRNFENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLHFAIESSFLDV 297
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
NVHP K E+ F + I + V + L G
Sbjct: 298 NVHPAKMELRFRDGEMIYKMVYHTVSMALAG 328
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + +R +T++ + +K+GG+ L+++ DNG GI +E++
Sbjct: 20 VIERPASVVKELLENAIDAR-----ATAVTIEIKEGGIGLIRVTDNGCGIPREEIPTAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT+ S R ID +
Sbjct: 75 RHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTEDSMSGTRYC-IDGGEEKS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+ +GT + +LFYN P RRK LK P+ E IAD+V + ++ +P V +
Sbjct: 134 IEEVGAPEGTTFLVRNLFYNTPARRKFLKTPATEGAHIADLVEKISLSHPEVSIRFIQNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ + + T+ N S ++I IYG I+
Sbjct: 194 Q--SRLHTSGNHSLRDIIYTIYGREIA 218
>gi|397688245|ref|YP_006525564.1| DNA mismatch repair protein [Pseudomonas stutzeri DSM 10701]
gi|395809801|gb|AFN79206.1| DNA mismatch repair protein [Pseudomonas stutzeri DSM 10701]
Length = 626
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L+ + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 6 RIQLLNPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A+
Sbjct: 66 GISAEDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAEAAEAW 125
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ ++
Sbjct: 126 QVETEGRD--------MEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRSEKTEFDHLQE 177
Query: 183 IVERACLLEIASLNNLE-------LLSVEGTD------------DAF------------Q 211
+++R L +L L G D AF
Sbjct: 178 VIKRLALARFDVGFHLRHNGKAVLALHAAGEDAARARRVAAVCGSAFLEQALPIEVERSG 237
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 238 LRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLDV 297
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 298 DPAVVDVNVHPTKHEVRF 315
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI ED+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIDVEVEQGGVKLLRVRDDGSGISAEDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTAEAAEAWQVETEGRDMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ VGF L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRSEKTEFDHLQEVIKRLALARFDVGFHLR 194
>gi|387770167|ref|ZP_10126353.1| DNA mismatch repair protein [Pasteurella bettyae CCUG 2042]
gi|386904984|gb|EIJ69766.1| DNA mismatch repair protein [Pasteurella bettyae CCUG 2042]
Length = 634
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 162/320 (50%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ IQ+ ++ GG L++I+DNG G
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIQIDIENGGASLIRIRDNGLG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ EDL++I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKDELGLALARHATSKIASLEDLDAILSLGFRGEALASISSVSRLTLTSRTAEQNEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEE--------- 158
D+ + ++L+ DK + +E
Sbjct: 123 VYAQGRDMETTIQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALAK 182
Query: 159 KQWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
Q T+ H V KS Q S+K+ A + + + L ++ D+ L +G
Sbjct: 183 PQITFTLTHNGKTVRQYKSAVQISQKLKRVASICGDDFIK--QALQIDWKHDSLHL--SG 238
Query: 217 WITNVNFSTKKMTFLL-FINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
WI +F + ++N + R I Q Y+ YL +P L L +DP V
Sbjct: 239 WIALPHFHRSQNDLAYSYVNGRMIRDKVINHAIRQAYADYLNNEQYPAFVLYLDLDPNEV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQARLI 317
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ EDL++I + GFRGEA
Sbjct: 39 ASRIQIDIENGGASLIRIRDNGLGIPKDELGLALARHATSKIASLEDLDAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ ++ I+P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQNEAWQVYAQGRDMETTIQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS-EVIGNIYGN 491
K L+ E+ I +V+ R A+ P + FTL + + ++ V S + + +I G+
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKPQITFTLTHNGKTVRQYKSAVQISQKLKRVASICGD 218
Query: 492 NISRR 496
+ ++
Sbjct: 219 DFIKQ 223
>gi|387815059|ref|YP_005430546.1| methyl-directed mismatch repair protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381340076|emb|CCG96123.1| methyl-directed mismatch repair protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 629
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 43/316 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ L + N+IAAGEV++RPA+ +KEL+EN+LDA ++ + V ++QGG KL++++D+G
Sbjct: 2 PHIQLLSPRLANQIAAGEVVERPASVVKELVENALDAGASRVDVEIEQGGAKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------ 118
+GI + D+ + R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T
Sbjct: 62 SGIEEADLPLALSRHATSKILTLDDLEAVASLGFRGEALASISSVSRLTLTSRTELQEAA 121
Query: 119 ------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE--KQWY 162
+ SP A+ T + DL ++L+ +K + EE ++
Sbjct: 122 ARVEVEGRDMDARISPAAHPVGTTVEVRDLF-FNTPARRKFLRTEKTEFNHVEECVRRQA 180
Query: 163 RTVEHTLVPLMKSQ-----YQPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQLK 213
+ T L +Q +P+E +++ L ++N ++ E T L+
Sbjct: 181 LSRFDTGFTLRHNQRVVQSLRPAETDLDKERRIGSLCGQQFIDNAVVIDAEATG----LR 236
Query: 214 VTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ GW+ FS + F+N + R + Q Y L P L L +DP
Sbjct: 237 LWGWVALPTFSRSQADLQYFFVNGRVIRDKLVAHAVRQAYRDVLYNNRHPAFVLYLEVDP 296
Query: 267 KNVDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 297 ATVDVNVHPTKHEVRF 312
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ + L + SRV V ++QGG KL++++D+G+GI + D+ +
Sbjct: 20 VVERPASVVKELVENALDAGASRV--------DVEIEQGGAKLIRVRDDGSGIEEADLPL 71
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T+ A R +
Sbjct: 72 ALSRHATSKILTLDDLEAVASLGFRGEALASISSVSRLTLTSRTELQEAAARVEVEGRDM 131
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
I P A GT + DLF+N P RRK L+ E+N + + V R A+ GFTL+
Sbjct: 132 DARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECVRRQALSRFDTGFTLR 191
Query: 465 KQNENLADIR-TNVNSSHSEVIGNIYGNNI 493
+ +R + IG++ G
Sbjct: 192 HNQRVVQSLRPAETDLDKERRIGSLCGQQF 221
>gi|302189791|ref|ZP_07266464.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae 642]
Length = 648
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|152988751|ref|YP_001350994.1| DNA mismatch repair protein [Pseudomonas aeruginosa PA7]
gi|166232101|sp|A6VD59.1|MUTL_PSEA7 RecName: Full=DNA mismatch repair protein MutL
gi|150963909|gb|ABR85934.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa PA7]
Length = 633
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 156/325 (48%), Gaps = 53/325 (16%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA + I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACLL-----------------------EIASLNNL----------ELLSVE 204
+++++R L E+A + + L +E
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIE 232
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPF 257
+ L GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHL--WGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPT 290
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHF 282
L +DP VDVNVHPTKHEV F
Sbjct: 291 FVLFFEVDPAVVDVNVHPTKHEVRF 315
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVAKELLENS-----LDAGARRIDVEVEQGGVKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
>gi|399519273|ref|ZP_10760081.1| DNA mismatch repair protein mutL [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399113097|emb|CCH36639.1| DNA mismatch repair protein mutL [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 623
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + N+IAAGEV++RPA+ KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 3 RIHLLSARLANQIAAGEVVERPASVAKELLENSLDSGARRIDVDVEQGGVKLLKVRDDGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ + EDL ++ + GFRGEALASIS V+ LT+ ++T + A+
Sbjct: 63 GIAPDDLPLALARHATSKIRELEDLEAVLSMGFRGEALASISSVSRLTLTSRTADADQAW 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ ++
Sbjct: 123 QVETEGRD--------MEPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQE 174
Query: 183 IVERACLLEI-----ASLNNLELLSVEGTDD--------------AF------------Q 211
+++R L N +LS+ D AF
Sbjct: 175 VIKRLALARFDVGFHLRHNGKTVLSLHEAGDEISRARRVASVCGPAFLEQALPIEIERGG 234
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++ GW+ FS + F N + + Q Y L G P L L +
Sbjct: 235 LRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 295 DPSTVDVNVHPTKHEVRF 312
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 19/225 (8%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ ++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 20 VVERPASVAKELLENSLDS-----GARRIDVDVEQGGVKLLKVRDDGSGIAPDDLPLALA 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL ++ + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 75 RHATSKIRELEDLEAVLSMGFRGEALASISSVSRLTLTSRTADADQAWQVETEGRDMEPR 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ VGF L+
Sbjct: 135 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVGFHLRHNG 194
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALARKA 512
+ V S H G+ IS R RR +S A +A
Sbjct: 195 K-------TVLSLHEA------GDEIS-RARRVASVCGPAFLEQA 225
>gi|160938811|ref|ZP_02086162.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
gi|158437774|gb|EDP15534.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
Length = 763
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 160/328 (48%), Gaps = 55/328 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LD++ +N+IAAGEVI+RPA+ +KELLEN++DA +T++ V +K GG ++++ DNG G
Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAVDAHATAVTVEIKDGGCSMIRVTDNGWG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ EDL +IS+ GFRGEALASI+ VA + +ITKT S R
Sbjct: 64 IPKEEIPLAFLRHATSKIKTVEDLFTISSLGFRGEALASIAAVAQVELITKTGDSLTGSR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY-RTVEHTLVPLMKSQYQPSEKIVE 185
+ ++ +++ E+IG + R + + K P +
Sbjct: 124 Y-------------QIEGGVEKGLEEIGAPDGTTIIARNLFYNTPARKKFLKTPMTEGAH 170
Query: 186 RACLLEIASL-----------NNLELLSVEGTDD-------AFQLKVTG----------W 217
A L+E +L NN L G + F ++ G W
Sbjct: 171 VAALVEKIALSHPDISIRFIQNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDW 230
Query: 218 ITNVNFSTKKMTFL-------LFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
IT F+ K + FIN I + IE+ Y Y+ + +PF L +
Sbjct: 231 ITVTGFTGKPVIARSNRNYENYFINGRYIKSSIISKAIEEAYKPYMMQHKYPFTMLHFHI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERV 292
+P +DVNVHPTK E+ F + + V
Sbjct: 291 EPDTLDVNVHPTKMELRFADGEKVYHAV 318
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L +T++ V +K GG ++++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELL-----ENAVDAHATAVTVEIKDGGCSMIRVTDNGWGIPKEEIPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +IS+ GFRGEALASI+ VA + +ITKT S R I+ ++
Sbjct: 75 RHATSKIKTVEDLFTISSLGFRGEALASIAAVAQVELITKTGDSLTGSRYQ-IEGGVEKG 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ GT IIA +LFYN P R+K LK P E +A +V + A+ +P + + N
Sbjct: 134 LEEIGAPDGTTIIARNLFYNTPARKKFLKTPMTEGAHVAALVEKIALSHPDISIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + ++I ++G I+
Sbjct: 194 QN--KLYTSGNHNLKDLIYTVFGREIA 218
>gi|406915326|gb|EKD54421.1| hypothetical protein ACD_60C00087G0033 [uncultured bacterium]
Length = 578
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 42/314 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KL + N+IAAGEVI+RPA+ +KEL+ENS+DA++T I + + QGG++L++++DNG+
Sbjct: 2 RIEKLTTLLSNQIAAGEVIERPASVVKELIENSIDARATQIDLDILQGGVRLIRVRDNGS 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI +D+ + TTSK+ +DL I T GFRGEALASIS ++ L + + T
Sbjct: 62 GIHADDLSLALHPHTTSKIKTLDDLEDIRTLGFRGEALASISAISRLMLTSATLDQMGAQ 121
Query: 119 ----------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIG--DKEEKQWYR- 163
+ SP A+ T + DL ++L+ +K + D+ K+
Sbjct: 122 VKVEGNEVSQELSPAAHPVGTTIEIRDLF-FNTPARRKFLRTEKTEFSYIDEVVKRIALS 180
Query: 164 --TVEHTLVPLMK--SQYQPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQLKVT 215
T++ +L K QY+ + + E+ A L IA + N L +E LK++
Sbjct: 181 CFTIDFSLKHNQKLIRQYRSAHSLAEQEQRVASLCGIAFMENALHLEIETAG----LKLS 236
Query: 216 GWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GWI FS + F N + I + Y L +P L L + P
Sbjct: 237 GWIAKPEFSRSQADLQYFYVNGRMVRDKLVNHAIREAYHDVLYGNRYPAFVLFLEILPNE 296
Query: 269 VDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 297 VDVNVHPTKHEVRF 310
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 10/195 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S +R +T I + + QGG++L++++DNG+GI +D+ +
Sbjct: 19 VIERPASVVKELIENSIDAR-----ATQIDLDILQGGVRLIRVRDNGSGIHADDLSLALH 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TTSK+ +DL I T GFRGEALASIS ++ L ++T + +++
Sbjct: 74 PHTTSKIKTLDDLEDIRTLGFRGEALASISAISRL-MLTSATLDQMGAQVKVEGNEVSQE 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A GT I DLF+N P RRK L+ E++ I +VV R A+ + F+LK
Sbjct: 133 LSPAAHPVGTTIEIRDLFFNTPARRKFLRTEKTEFSYIDEVVKRIALSCFTIDFSLKHNQ 192
Query: 468 ENLADIRTNVNSSHS 482
+ + R S+HS
Sbjct: 193 KLIRQYR----SAHS 203
>gi|424070455|ref|ZP_17807890.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|408000610|gb|EKG40960.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 648
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|289623754|ref|ZP_06456708.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289648629|ref|ZP_06479972.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str.
2250]
gi|416019058|ref|ZP_11565951.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024095|ref|ZP_11568274.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422581041|ref|ZP_16656185.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|320321886|gb|EFW77982.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331009|gb|EFW86983.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330865892|gb|EGH00601.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 648
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|67471818|ref|XP_651821.1| DNA mismatch repair protein MLH1 [Entamoeba histolytica HM-1:IMSS]
gi|56468601|gb|EAL46434.1| DNA mismatch repair protein MLH1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705967|gb|EMD45906.1| DNA mismatch repair protein mlh1, putative [Entamoeba histolytica
KU27]
Length = 702
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 186/339 (54%), Gaps = 46/339 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK+LD+T +N+I AGEVIQRP N +KEL+ENS+DA +SI +++ +GGL+ + + D+G
Sbjct: 2 KIKRLDQTTINKIGAGEVIQRPFNVVKELIENSIDAHCSSIIISIGKGGLESIVVTDDGC 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED+ ++ R+TTSK + + T+G+RGEAL+ +++V +TII++T TS Y
Sbjct: 62 GISLEDLKVLGGRYTTSKSIEGD------TYGYRGEALSCMTYVGKVTIISRTATSEIGY 115
Query: 126 R---------------WCTYLADLMALAL---------MEMSQYLQRDKEQIGDKEEKQW 161
+ C+ ++ L M+ ++ ++ IGD +
Sbjct: 116 KVVFQNGQITENPIPLACSIGTTVIVNNLFDKMLRKKSMKETEEYKKIISIIGDYAIHKA 175
Query: 162 YRTVEHTL----VPLMKSQYQPSEKIVERACLLEIASLNN-LELLSVEGTDDAFQLKVTG 216
T+ TL + + + + I++ + +++N L+ S + + FQ+
Sbjct: 176 --TIAFTLRKAGTSVCEIKTEKHSTILKNISKIFTTNISNNLQQYSYQCLEPPFQM--IC 231
Query: 217 WITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+++N F KK + F+N+ +K++IE++Y YLPK ++ FVYLS+ ++ + +D
Sbjct: 232 YLSNSIFQGKKNKMIFFVNDRFIEHIGLKKVIERIYDEYLPKVNY-FVYLSINVNKERID 290
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
NV+P+K + L E+ +I ++ L ++ + +R F
Sbjct: 291 CNVNPSKTAIRLLEEEKLINQIDKFLNSIIIEFSQTRSF 329
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 118/188 (62%), Gaps = 8/188 (4%)
Query: 314 TSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL 373
+SI +++ +GGL+ + + D+G GI ED+ ++ R+TTSK + + T+G+RGEAL
Sbjct: 40 SSIIISIGKGGLESIVVTDDGCGISLEDLKVLGGRYTTSKSIEGD------TYGYRGEAL 93
Query: 374 ASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRK 433
+ +++V +TII++T TS Y+ + + ++ + P A + GT +I +LF + R+K
Sbjct: 94 SCMTYVGKVTIISRTATSEIGYKVVFQNGQITENPIPLACSIGTTVIVNNLFDKM-LRKK 152
Query: 434 ALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
++K+ +EEY KI ++ YA+H + FTL+K ++ +I+T +S+ + I I+ NI
Sbjct: 153 SMKE-TEEYKKIISIIGDYAIHKATIAFTLRKAGTSVCEIKTEKHSTILKNISKIFTTNI 211
Query: 494 SRRVRRFS 501
S ++++S
Sbjct: 212 SNNLQQYS 219
>gi|423367755|ref|ZP_17345187.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
gi|401083408|gb|EJP91666.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
Length = 381
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|425065767|ref|ZP_18468887.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
gallicida P1059]
gi|404384143|gb|EJZ80588.1| DNA mismatch repair protein MutL [Pasteurella multocida subsp.
gallicida P1059]
Length = 617
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 164/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLMRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL++I + GFRGEALASIS V+ LT+ ++ T A
Sbjct: 63 IVKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPVTQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM LQ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------REMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEV 174
Query: 184 VERACLLEIA--------------------SLNNLELLSVEGTDDAFQ-----------L 212
+ R L ++A L+ ++ D+ Q L
Sbjct: 175 IRRIALAKMAIAFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDL 234
Query: 213 KVTGWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ FS T+ +IN + R I Q Y+ +L +P L + ++
Sbjct: 235 HLSGWVAQPTFSRTQNDLNYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQQRLV 317
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL++I + GFRGEA
Sbjct: 39 ATRIQIDIENGGSTLMRIRDNGIGIVKDELSLALARHATSKIASLDDLDNILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ T A++ +++ ++P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRPVTQNEAWQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +V+ R A+ + FTL
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKMAIAFTL 189
>gi|20089411|ref|NP_615486.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
gi|19914309|gb|AAM03966.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 656
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 176/336 (52%), Gaps = 45/336 (13%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+Q KI+ LD +N+IAAGEVI+RPA+ +KEL++NS+DA +T I++ V++GG + I+
Sbjct: 3 EQGNKIRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIR 62
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK---- 117
DNG G+ K D + E+ TSKLT+ EDL+++ST GFRGEALASI+ +A + I+T+
Sbjct: 63 DNGCGMSKADALLSYEKHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTRPPEE 122
Query: 118 ---------------TKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
T + A Y+ +L +YL+ D+ ++ +
Sbjct: 123 LTGTKLVIHGGKVQETSDAGTAPGTSVYVKELF-YNTPARRKYLKSDRTELAHITDTVTR 181
Query: 163 RTVEHTLVPL-MKSQYQPSEKIVERACLLEIASLNNL-------ELLSVEGTDDAFQLKV 214
+ + + + S+ +P + + L + SL NL +L +E + F+++
Sbjct: 182 LALANPGISFTLLSEGKPVIRSTGSSDLFK--SLVNLLGPDTARSMLPLEYRTEDFEIR- 238
Query: 215 TGWI----TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
G++ TN S + +F+N I + + Y +PKG +P L+L +
Sbjct: 239 -GYVSKPETNRGGSDQ---LYVFVNTRPVTSRAINMAVREGYYTKIPKGRYPVAVLALTL 294
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P+ VDVNVHP K EV F E + + V +EK L
Sbjct: 295 NPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVEKVL 330
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 16/226 (7%)
Query: 278 HEVHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQ 329
+++ L DTI IER S++++ + S +T I++ V++GG +
Sbjct: 6 NKIRILDRDTINKIAAGEVIERPASVVKELVDNS-----IDAGATEIRIEVEKGGKHSIL 60
Query: 330 IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 389
I+DNG G+ K D + E+ TSKLT+ EDL+++ST GFRGEALASI+ +A + I+T+
Sbjct: 61 IRDNGCGMSKADALLSYEKHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTRPP 120
Query: 390 TSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVV 449
+ K+++ GT + ++LFYN P RRK LK E I D V
Sbjct: 121 EELTGTKLVIHGGKVQE-TSDAGTAPGTSVYVKELFYNTPARRKYLKSDRTELAHITDTV 179
Query: 450 SRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISR 495
+R A+ NP + FTL + + + IR+ +S + + N+ G + +R
Sbjct: 180 TRLALANPGISFTLLSEGKPV--IRSTGSSDLFKSLVNLLGPDTAR 223
>gi|237798277|ref|ZP_04586738.1| DNA mismatch repair protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331021129|gb|EGI01186.1| DNA mismatch repair protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 647
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + I + V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENS-----LDSGARRIDIDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|254281638|ref|ZP_04956606.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR51-B]
gi|219677841|gb|EED34190.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR51-B]
Length = 605
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 48/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD + N+IAAGEV+ RPA+ +KE LENSLDA + I + ++ GG +L++++D+G
Sbjct: 3 RIRSLDPRIANQIAAGEVVDRPASVVKEALENSLDAGARRIDIDIEAGGSQLIRVRDDGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ++D+ + ER TSK++ EDL +++T GFRGEALASI+ V+ +T+ + S
Sbjct: 63 GIGRDDLTLALERHATSKISTIEDLEAVATLGFRGEALASIASVSRMTLTSNASDS--VS 120
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
C +A+ +MS L+ G E + +Y T + K+++ ++
Sbjct: 121 DGCCAVAE-----GRDMSVTLRPAPHPRGTSLEVRDLFYNTPARRKFLRTEKTEFGHIDE 175
Query: 183 IVERACL------------------LEIASLNNLELLSVEGT-------------DDAFQ 211
+V R L L A + L L + G +A
Sbjct: 176 VVRRQALSRSDVSFTLRHNNKVVRSLPAADDDGLLLRRLSGVCGEAFMAQCVSIEREAGA 235
Query: 212 LKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F+N + R I+Q Y L G P L L +
Sbjct: 236 LMLQGWVGLPTFSRSQADLQYFFVNGRVIRDKLVSHAIKQAYRDVLFHGRHPAYVLFLSL 295
Query: 265 DPKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 296 PPARVDVNVHPTKHEVRF 313
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R S++++ L S + I + ++ GG +L++++D+G GI ++D+ + E
Sbjct: 20 VVDRPASVVKEALENS-----LDAGARRIDIDIEAGGSQLIRVRDDGLGIGRDDLTLALE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS---PCAYRASYIDSKL 404
R TSK++ EDL +++T GFRGEALASI+ V+ +T+ + S C A D +
Sbjct: 75 RHATSKISTIEDLEAVATLGFRGEALASIASVSRMTLTSNASDSVSDGCCAVAEGRDMSV 134
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P +GT + DLFYN P RRK L+ E+ I +VV R A+ V FTL+
Sbjct: 135 T--LRPAPHPRGTSLEVRDLFYNTPARRKFLRTEKTEFGHIDEVVRRQALSRSDVSFTLR 192
Query: 465 KQNE 468
N+
Sbjct: 193 HNNK 196
>gi|238784776|ref|ZP_04628778.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
gi|238714289|gb|EEQ06299.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
Length = 633
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 173/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG+KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGVKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 INKEDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS A + +A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAATDPSHHERRLASICGLAFLQHALAVSWQHGD----LTIRG 238
Query: 217 WITNVNFSTK--KMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLGEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG+KL++I+DNG GI KED+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGVKLIRIRDNGCGINKEDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSSHSE 483
+ + R + SH E
Sbjct: 194 KLMRQYRAATDPSHHE 209
>gi|357055418|ref|ZP_09116486.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
gi|355382537|gb|EHG29634.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
Length = 687
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 158/318 (49%), Gaps = 55/318 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LD++ +N+IAAGEVI+RPA+ +KELLEN++DA +T++ V +K GG ++++ DNG G
Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAIDAHATAVTVEIKDGGCSMIRVTDNGWG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ EDL +IS+ GFRGEALASI+ VA + +ITKT S R
Sbjct: 64 IPKEEIPLAFLRHATSKIKTVEDLFTISSLGFRGEALASIAAVAQVELITKTGNSLTGSR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY-RTVEHTLVPLMKSQYQPSEKIVE 185
+ ++ +++ ++IG E R++ + K P +
Sbjct: 124 Y-------------QIEGGVEKGLDEIGAPEGTTIIARSLFYNTPARKKFLKTPMTEGAH 170
Query: 186 RACLLEIASL-----------NNLELLSVEGTDD-------AFQLKVTG----------W 217
A L+E +L NN L G + F ++ G W
Sbjct: 171 VAALVEKIALSHPDISIRFIQNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDW 230
Query: 218 ITNVNFSTKKMTFL-------LFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
IT F+ K + FIN I + IE+ Y Y+ + +PF L +
Sbjct: 231 ITVTGFTGKPVIARSNRNYENYFINGRYIKSTIISKAIEEAYKPYMMQHKYPFTMLHFHI 290
Query: 265 DPKNVDVNVHPTKHEVHF 282
+P +DVNVHPTK E+ F
Sbjct: 291 EPDTLDVNVHPTKMELRF 308
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L +T++ V +K GG ++++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELL-----ENAIDAHATAVTVEIKDGGCSMIRVTDNGWGIPKEEIPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL +IS+ GFRGEALASI+ VA + +ITKT S R I+ ++
Sbjct: 75 RHATSKIKTVEDLFTISSLGFRGEALASIAAVAQVELITKTGNSLTGSRYQ-IEGGVEKG 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ +GT IIA LFYN P R+K LK P E +A +V + A+ +P + + N
Sbjct: 134 LDEIGAPEGTTIIARSLFYNTPARKKFLKTPMTEGAHVAALVEKIALSHPDISIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + ++I ++G I+
Sbjct: 194 QN--KLYTSGNHNLKDLIYTVFGREIA 218
>gi|386315099|ref|YP_006011264.1| DNA mismatch repair protein MutL [Shewanella putrefaciens 200]
gi|319427724|gb|ADV55798.1| DNA mismatch repair protein MutL [Shewanella putrefaciens 200]
Length = 641
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 212/433 (48%), Gaps = 67/433 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M++ I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I
Sbjct: 1 MEKSMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKI 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+DNG+GI KE++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAE 120
Query: 121 SPCAYRWCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEK 159
A W Y + MA+ +M + ++L+ DK + +E
Sbjct: 121 QTEA--WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDE- 177
Query: 160 QWYR-------TVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGT 206
W + + TL K Y+P+ + E L + ++ + L +E
Sbjct: 178 -WLKRIALVRGDIHFTLTHNGKLVRNYRPA--VNEAQYLQRLTQVSGRQFAEHALKIECQ 234
Query: 207 DDAFQLKVTGWITNVNFSTKKMTFLLFINNPI--KRMIEQ-VYSIYLPKGSF--PFVYLS 261
D L+++G++ + + T ++N + R++ V + K P L
Sbjct: 235 HD--DLRLSGYLQSPWSTVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHKAEIEQPGYVLM 292
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEK------TLLGSNTSRVFY 310
L +DP VDVNVHP KHEV F H+ D I++ +QS LE+ T G+ T
Sbjct: 293 LEIDPHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPETA 351
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGI--RKEDMDIVC---ERFTTSKLTQFEDLNSI-S 364
T ++ GL L + TG R D V ERFT S TQ + S+ S
Sbjct: 352 CMDTQCAKAIEPSGLFELASTSDQTGKIERIRDASPVMASQERFTESSQTQ--AVTSVRS 409
Query: 365 TFGFRGEALASIS 377
FG + A S++
Sbjct: 410 GFGIQKNAFGSMA 422
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI KE++ + R TSKL +DL +I +FGFRGEA
Sbjct: 43 ATRIDIEIDKGGSKLIKIRDNGSGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + I P A G+ I A DLF+N P RR
Sbjct: 103 LASISSVSRLTLTSRTAEQTEAWQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARR 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
+ LK E+ I + + R A+ + FTL + + + R VN +
Sbjct: 163 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKLVRNYRPAVNEA 210
>gi|45658356|ref|YP_002442.1| DNA mismatch repair protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601599|gb|AAS71079.1| DNA mismatch repair protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 597
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 7 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 66
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 67 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 126
Query: 126 R------------------WCTYLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ L + + ++L+ RD+ Q +
Sbjct: 127 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 186
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 187 EDVRFRLFQDGKEVFVLPTRENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 238
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 239 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 293
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 294 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 333
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 44 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ + K+ + + G GT+I+ E+LF+N P RR
Sbjct: 104 LASIASVSRLTLESGTKEQKTAWKTRSVAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + T N E I +++G N
Sbjct: 163 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPTRENK--KERIIDLFGEN 220
Query: 493 I 493
Sbjct: 221 F 221
>gi|410665559|ref|YP_006917930.1| DNA mismatch repair protein [Simiduia agarivorans SA1 = DSM 21679]
gi|409027916|gb|AFV00201.1| DNA mismatch repair protein [Simiduia agarivorans SA1 = DSM 21679]
Length = 617
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 148/314 (47%), Gaps = 42/314 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KELLENS+DA +T + V V++GG+KL++++DNG G
Sbjct: 5 IRLLSPRLANQIAAGEVVERPASVVKELLENSIDAGATRLDVEVEEGGVKLMRVRDNGVG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+D+ + R TSK+ + +DL ++ T GFRGEALASIS V+ L I +P
Sbjct: 65 LSKDDLPLALSRHATSKIYELDDLEAVGTLGFRGEALASISSVSRLLITGNQSDNPTEGW 124
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
MA LM + + + EK + +E + L +
Sbjct: 125 SARSEGRDMATELMPAPHPRGATVEVRDLFFNTPARRKFLRTEKTEFSRLEEVVKRLALA 184
Query: 176 QYQPSEKIVE--------RACLLEI------------ASLNNLELLSVEGTDDAFQLKVT 215
+ + + RAC I A L N + VE LK+
Sbjct: 185 HFDIAFSLSHNGRAIHQWRACNSRIEQERRLGQICGNAFLENSLYVEVERAG----LKLW 240
Query: 216 GWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ FS + F N + + Q Y L G P L L +DP
Sbjct: 241 GWVALPAFSRSQADLQHFYVNGRAIRDKLVTHAVRQAYQDVLFHGRHPAYVLYLELDPAT 300
Query: 269 VDVNVHPTKHEVHF 282
VDVNVHPTKHEV F
Sbjct: 301 VDVNVHPTKHEVRF 314
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T + V V++GG+KL++++DNG G+ K+D+ +
Sbjct: 21 VVERPASVVKELLENS-----IDAGATRLDVEVEEGGVKLMRVRDNGVGLSKDDLPLALS 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC-AYRASYIDSKLKD 406
R TSK+ + +DL ++ T GFRGEALASIS V+ L I +P + A +
Sbjct: 76 RHATSKIYELDDLEAVGTLGFRGEALASISSVSRLLITGNQSDNPTEGWSARSEGRDMAT 135
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+ P +G + DLF+N P RRK L+ E++++ +VV R A+ + + F+L
Sbjct: 136 ELMPAPHPRGATVEVRDLFFNTPARRKFLRTEKTEFSRLEEVVKRLALAHFDIAFSLSHN 195
Query: 467 NENLADIRT-NVNSSHSEVIGNIYGN 491
+ R N +G I GN
Sbjct: 196 GRAIHQWRACNSRIEQERRLGQICGN 221
>gi|422594254|ref|ZP_16668545.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330984562|gb|EGH82665.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 648
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLR 210
>gi|257482413|ref|ZP_05636454.1| DNA mismatch repair protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|422680416|ref|ZP_16738688.1| DNA mismatch repair protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|331009762|gb|EGH89818.1| DNA mismatch repair protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 648
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|70734068|ref|YP_257708.1| DNA mismatch repair protein [Pseudomonas protegens Pf-5]
gi|68348367|gb|AAY95973.1| DNA mismatch repair protein MutL [Pseudomonas protegens Pf-5]
Length = 636
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DDA +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKSILSLHEAKDDAARARRVAAVCGSGFLEQALPIEVERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPSVVDVNVHPTKHEVRF 319
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQAGVKLLRVRDDGSGISSDDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+++
Sbjct: 202 KSI 204
>gi|425897209|ref|ZP_18873800.1| DNA mismatch repair protein MutL [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397884214|gb|EJL00700.1| DNA mismatch repair protein MutL [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 636
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKSVLSLHEANDDVARARRVAAVCGSGFLEQALPIEVERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAVVDVNVHPTKHEVRF 319
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQAGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+++
Sbjct: 202 KSV 204
>gi|399004970|ref|ZP_10707571.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM17]
gi|398127889|gb|EJM17290.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM17]
Length = 636
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKSVLSLHEANDDVARARRVAAVCGSGFLEQALPIEVERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAVVDVNVHPTKHEVRF 319
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQAGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+++
Sbjct: 202 KSV 204
>gi|21231736|ref|NP_637653.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768138|ref|YP_242900.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991275|ref|YP_001903285.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris
str. B100]
gi|25090745|sp|Q8P8E4.1|MUTL_XANCP RecName: Full=DNA mismatch repair protein MutL
gi|81305885|sp|Q4UVP3.1|MUTL_XANC8 RecName: Full=DNA mismatch repair protein MutL
gi|229486329|sp|B0RRZ8.1|MUTL_XANCB RecName: Full=DNA mismatch repair protein MutL
gi|21113440|gb|AAM41577.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573470|gb|AAY48880.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733035|emb|CAP51233.1| DNA mismatch repair protein MutL [Xanthomonas campestris pv.
campestris]
Length = 624
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 46/337 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L E ++N+IAAGEV++RPA+ +KEL+EN+LDA +T + + +++GG++L++I+DNG G
Sbjct: 3 IRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNGGG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I E++ + R TSK+ +DL +++T GFRGEAL SI+ V+ T+ ++ +
Sbjct: 63 IAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHGSA 122
Query: 127 W---CTYLADLMALA---------------LMEMSQYLQRDKEQIGDKEEKQWYRT---- 164
L ++M A + ++L+ ++ ++G EE W R+
Sbjct: 123 LQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEE--WLRSLALA 180
Query: 165 -------VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
V H P +Y+P + + + + L V+ + L++ GW
Sbjct: 181 RPDVELRVSHNGKP--SRRYKPGDLYSDARLGETLGEDFARQALRVDHS--GAGLRLHGW 236
Query: 218 ITNVNFSTKKMT-FLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ ++S L++N + ++ Y L G P L L +DP VD
Sbjct: 237 VAQPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVD 296
Query: 271 VNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGS 303
VNVHP KHEV F L D + +Q L +T G+
Sbjct: 297 VNVHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGA 333
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + +T + + +++GG++L++I+DNG GI E++ +
Sbjct: 19 VVERPASVVKELV-----ENALDAGATRVDIDLEEGGVRLIRIRDNGGGIAPEELPLAVS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY--IDSKLK 405
R TSK+ +DL +++T GFRGEAL SI+ V+ T+ ++ P A S I+
Sbjct: 74 RHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASR---RPDAEHGSALQIEGGRL 130
Query: 406 DPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
+ P A GT + +LF+N+P RRK L+ E I + + A+ P V L+
Sbjct: 131 GEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALARPDV--ELRV 188
Query: 466 QNENLADIRTNVNSSHSEV-IGNIYGNNISRRVRR 499
+ R +S+ +G G + +R+ R
Sbjct: 189 SHNGKPSRRYKPGDLYSDARLGETLGEDFARQALR 223
>gi|389686498|ref|ZP_10177819.1| DNA mismatch repair protein MutL [Pseudomonas chlororaphis O6]
gi|388549959|gb|EIM13231.1| DNA mismatch repair protein MutL [Pseudomonas chlororaphis O6]
Length = 636
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTREADQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 181
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 182 VIKRLALARFDVAFHLRHNGKSVLSLHEANDDVARARRVAAVCGSGFLEQALPIEVERNG 241
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 242 LHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 301
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 302 DPAVVDVNVHPTKHEVRF 319
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQAGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTREADQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+++
Sbjct: 202 KSV 204
>gi|313222327|emb|CBY39275.1| unnamed protein product [Oikopleura dioica]
Length = 152
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 92/120 (76%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + V+N+IAAGEV+QRPANA+KEL+ENS+DA + SI++ K+GGL++ I+D+G G
Sbjct: 3 IRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + RF TSKL ++ DL I +FGFRGEALASISHV HLTI +K + AY+
Sbjct: 63 IAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVAYK 122
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI++ K+GGL++ I+D+G GI ED+ + RF TSKL ++ DL I +FGFRGEA
Sbjct: 39 AKSIKIKTKKGGLEMFSIEDDGCGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK 403
LASISHV HLTI +K + AY+ S+ K
Sbjct: 99 LASISHVGHLTITSKPASQQVAYKLSFDGGK 129
>gi|417763559|ref|ZP_12411536.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000624]
gi|417773407|ref|ZP_12421287.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000621]
gi|418674373|ref|ZP_13235680.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000623]
gi|409940378|gb|EKN86018.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000624]
gi|410576796|gb|EKQ39798.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000621]
gi|410578793|gb|EKQ46647.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. 2002000623]
Length = 593
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 R------------------WCTYLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ L + + ++L+ RD+ Q +
Sbjct: 123 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPTRENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPSGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ + K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKTRSVAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + T N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPTRENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|220929118|ref|YP_002506027.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
gi|219999446|gb|ACL76047.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
Length = 665
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 163/321 (50%), Gaps = 53/321 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I LDE N+IAAGEV+++PA+ +KEL+ENS+DA +TSI V +K GG+ ++I DNG
Sbjct: 3 RIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGISYIKIADNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
G+ ++D++I ER TSK+ + EDL+S+ T GFRGEALASI+ VA + ++TKT S
Sbjct: 63 GMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEALASIASVASVELMTKTAASAYGM 122
Query: 123 ----------------CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
C + DL ++L++D + G +
Sbjct: 123 YVHVRGGVLQDVRQTGCPVGTTFIIKDLF-FNTPARYKFLKKDSTEAG---------YIS 172
Query: 167 HTLVPLMKSQYQPSEKIVE-RACLLEIASLNNLE--------------LLSVEGTDDAFQ 211
T+ + S K+ + L+ N+L+ L+ +E DD +
Sbjct: 173 DTISRIALGNPNISFKLTNGKTPLIHTPGNNDLKSVIYSIYGKEIIKNLVHIEYADD--K 230
Query: 212 LKVTGWI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+K++G+I +N N+ + + + + +EQ +S L K FPF L++ +
Sbjct: 231 VKISGYIGKPEAARSNRNYQSLYINKRYVKSKLVSYSVEQAFSSILMKNRFPFFVLNIDI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHE 285
+P VD NVHP K EV F E
Sbjct: 291 NPILVDANVHPAKIEVRFADE 311
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI V +K GG+ ++I DNG G+ ++D++I ER TSK+ + EDL+S+ T GFRGEA
Sbjct: 40 ATSISVDIKNGGISYIKIADNGIGMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ VA + ++TKT S L+D ++ GT I +DLF+N P R
Sbjct: 100 LASIASVASVELMTKTAASAYGMYVHVRGGVLQD-VRQTGCPVGTTFIIKDLFFNTPARY 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK+ S E I+D +SR A+ NP++ F L L I T N+ VI +IYG
Sbjct: 159 KFLKKDSTEAGYISDTISRIALGNPNISFKLTNGKTPL--IHTPGNNDLKSVIYSIYGKE 216
Query: 493 I 493
I
Sbjct: 217 I 217
>gi|120555682|ref|YP_960033.1| DNA mismatch repair protein [Marinobacter aquaeolei VT8]
gi|120325531|gb|ABM19846.1| DNA mismatch repair protein MutL [Marinobacter aquaeolei VT8]
Length = 629
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 45/317 (14%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ L + N+IAAGEV++RPA+ +KEL+EN+LDA ++ + V ++QGG KL++++D+G
Sbjct: 2 PHIQLLSPRLANQIAAGEVVERPASVVKELVENALDAGASRVDVEIEQGGAKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------ 118
+GI + D+ + R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T
Sbjct: 62 SGIEEADLPLALSRHATSKILTLDDLEAVASLGFRGEALASISSVSRLTLTSRTELQEAA 121
Query: 119 ------------KTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE---KQW 161
+ SP A+ T + DL ++L+ +K + EE +Q
Sbjct: 122 ARVEVEGRDMDARISPAAHPVGTTVEVRDLF-FNTPARRKFLRTEKTEFNHVEECVRRQA 180
Query: 162 YRTVEHTLVPLMKSQ-----YQPSEKIVER----ACLLEIASLNNLELLSVEGTDDAFQL 212
+ T L +Q +P+E +++ L ++N ++ E T L
Sbjct: 181 LGRFD-TGFTLRHNQRVVQSLRPAETDLDKERRIGSLCGQQFIDNAVVIDAEATG----L 235
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++ GW+ FS + F+N + R + Q Y L P L L +D
Sbjct: 236 RLWGWVALPTFSRSQADLQYFFVNGRVIRDKLVAHAVRQAYRDVLYNNRHPAFVLYLEVD 295
Query: 266 PKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 296 PATVDVNVHPTKHEVRF 312
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ + L + SRV V ++QGG KL++++D+G+GI + D+ +
Sbjct: 20 VVERPASVVKELVENALDAGASRV--------DVEIEQGGAKLIRVRDDGSGIEEADLPL 71
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+ +DL ++++ GFRGEALASIS V+ LT+ ++T+ A R +
Sbjct: 72 ALSRHATSKILTLDDLEAVASLGFRGEALASISSVSRLTLTSRTELQEAAARVEVEGRDM 131
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
I P A GT + DLF+N P RRK L+ E+N + + V R A+ GFTL+
Sbjct: 132 DARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECVRRQALGRFDTGFTLR 191
Query: 465 KQNENLADIR-TNVNSSHSEVIGNIYGNNI 493
+ +R + IG++ G
Sbjct: 192 HNQRVVQSLRPAETDLDKERRIGSLCGQQF 221
>gi|404402125|ref|ZP_10993709.1| DNA mismatch repair protein [Pseudomonas fuscovaginae UPB0736]
Length = 634
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 162/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL++
Sbjct: 1 MSERARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G+GI E++ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+
Sbjct: 61 RDDGSGISSEELPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 ADQAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ E DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKGILALHEAHDDAARARRVAAVCGSGFLEQALPID 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 VERNGLHLWGWVGLPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLEVDPAAVDVNVHPTKHEVRF 315
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G+GI E++ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIDVDVEQAGVKLLRVRDDGSGISSEELPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +++
Sbjct: 78 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KGI 200
>gi|289432881|ref|YP_003462754.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT]
gi|288946601|gb|ADC74298.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 170/335 (50%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RPA+ +KELLENSLDA++ + + +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 ITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS---EKI 183
TYL +L+ EM ++ + + + + + V L L Q++ S E +
Sbjct: 121 --TYL----SLSGGEMLKHTRMARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVV 174
Query: 184 VERACL-------LEIASLNNLE----------LLSVEGTDDAFQL-------------K 213
V A L + N L +L V G+D A ++
Sbjct: 175 VSYALAYPEVKFSLNVDGRNTLNTPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N ++R +EQ YS L G +P +++ +
Sbjct: 235 ISGLVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E + VQ + L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLV 329
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S ++ + + +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPASVVKELLENS-----LDAEAKRVDIVIREGGIGYIEVSDDGCGITSSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESGTYLSLSGGEMLKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A GT I LF +P R K LK P E +K+ +VV YA+ P V F+L
Sbjct: 134 TR-MARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALAYPEVKFSLNVDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + +YG++ + ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEVYGSDAASKM 220
>gi|313216746|emb|CBY37996.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 92/120 (76%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + V+N+IAAGEV+QRPANA+KEL+ENS+DA + SI++ K+GGL++ I+D+G G
Sbjct: 3 IRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + RF TSKL ++ DL I +FGFRGEALASISHV HLTI +K + AY+
Sbjct: 63 IAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVAYK 122
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 84/132 (63%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI++ K+GGL++ I+D+G GI ED+ + RF TSKL ++ DL I +FGFRGEA
Sbjct: 39 AKSIKIKTKKGGLEMFSIEDDGCGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHV HLTI +K + AY+ S+ + + P AG GT I +DLF+N+ R+
Sbjct: 99 LASISHVGHLTITSKPASQQVAYKLSFDEGQANGEAIPSAGKNGTLIQVKDLFHNMNMRQ 158
Query: 433 KALKQPSEEYNK 444
K+ E+Y K
Sbjct: 159 KSYNPNEEQYKK 170
>gi|420544822|ref|ZP_15043012.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-01]
gi|391432634|gb|EIQ94054.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-01]
Length = 335
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLGHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|212218528|ref|YP_002305315.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
gi|212012790|gb|ACJ20170.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
Length = 575
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 4 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEAL+SIS V+ LT+ ++ K + YR
Sbjct: 64 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMGYR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 124 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 176
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 177 RLALSHFTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 236
Query: 215 TGWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N I + + Q Y L G P L L +DP
Sbjct: 237 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPA 296
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 297 FVDINVHPTKHEVRF 311
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 20 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEAL+SIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 75 RHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 135 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + + S E ++G+++
Sbjct: 194 KEIIHFKPATTISGQENRIKSILGDVF 220
>gi|73748885|ref|YP_308124.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1]
gi|73660601|emb|CAI83208.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RPA+ +KELLENSLDA++ + + +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 ITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS---EKI 183
TYL +L+ EM ++ + + + + V L L Q++ S E +
Sbjct: 121 --TYL----SLSGGEMLKHTRMARAAGTSIRLSRLFSRVPARLKFLKTPQHEASKVTEVV 174
Query: 184 VERACL-------LEIASLNNLE----------LLSVEGTDDAFQL-------------K 213
V A L + N L +L V G+D A ++
Sbjct: 175 VSYALAYPEVKFSLNVDGRNTLNTPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N ++R +EQ YS L G +P +++ +
Sbjct: 235 ISGLVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E + VQ + L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLV 329
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S ++ + + +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPASVVKELLENS-----LDAEAKRVDIVIREGGIGYIEVSDDGCGITSSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESGTYLSLSGGEMLKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A GT I LF +P R K LK P E +K+ +VV YA+ P V F+L
Sbjct: 134 TR-MARAAGTSIRLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALAYPEVKFSLNVDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + +YG++ + ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEVYGSDAASKM 220
>gi|294827808|ref|NP_711356.2| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Lai str. 56601]
gi|386073420|ref|YP_005987737.1| DNA mismatch repair protein mutL [Leptospira interrogans serovar
Lai str. IPAV]
gi|417764599|ref|ZP_12412566.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417769881|ref|ZP_12417795.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|417785716|ref|ZP_12433418.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. C10069]
gi|418667475|ref|ZP_13228886.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418680227|ref|ZP_13241477.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418689815|ref|ZP_13250934.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. FPW2026]
gi|418700451|ref|ZP_13261393.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418703125|ref|ZP_13264015.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418709668|ref|ZP_13270454.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418714564|ref|ZP_13275124.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. UI 08452]
gi|418727610|ref|ZP_13286198.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. UI 12621]
gi|418732578|ref|ZP_13290305.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. UI 12758]
gi|421084723|ref|ZP_15545579.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
santarosai str. HAI1594]
gi|421103069|ref|ZP_15563669.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421114980|ref|ZP_15575394.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|421122633|ref|ZP_15582916.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. Brem 329]
gi|421127325|ref|ZP_15587549.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421133996|ref|ZP_15594138.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|59798328|sp|Q72PF7.2|MUTL_LEPIC RecName: Full=DNA mismatch repair protein MutL
gi|59798410|sp|Q8F6X4.2|MUTL_LEPIN RecName: Full=DNA mismatch repair protein MutL
gi|293385653|gb|AAN48374.2| DNA mismatch repair protein mutL [Leptospira interrogans serovar
Lai str. 56601]
gi|353457209|gb|AER01754.1| DNA mismatch repair protein mutL [Leptospira interrogans serovar
Lai str. IPAV]
gi|400327941|gb|EJO80180.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|400353043|gb|EJP05219.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400361004|gb|EJP16973.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. FPW2026]
gi|409948134|gb|EKN98124.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|409951057|gb|EKO05574.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. C10069]
gi|409958968|gb|EKO22745.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans str. UI 12621]
gi|410013701|gb|EKO71778.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410021734|gb|EKO88517.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410344533|gb|EKO95699.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. Brem 329]
gi|410366815|gb|EKP22203.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432673|gb|EKP77028.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
santarosai str. HAI1594]
gi|410435415|gb|EKP84547.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410756646|gb|EKR18265.1| DNA mismatch repair protein MutL [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410760352|gb|EKR26548.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410767189|gb|EKR37866.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410769903|gb|EKR45130.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410773358|gb|EKR53386.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. UI 12758]
gi|410789507|gb|EKR83209.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
str. UI 08452]
gi|455669983|gb|EMF35037.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|456822903|gb|EMF71373.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456968652|gb|EMG09822.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 593
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 R------------------WCTYLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ L + + ++L+ RD+ Q +
Sbjct: 123 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPTRENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ + K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKTRSVAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + T N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPTRENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|422587778|ref|ZP_16662448.1| DNA mismatch repair protein [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|422652920|ref|ZP_16715696.1| DNA mismatch repair protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330873787|gb|EGH07936.1| DNA mismatch repair protein [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330965979|gb|EGH66239.1| DNA mismatch repair protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 647
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ +
Sbjct: 142 QVETEGRD--------MDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I + V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDIDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMDAR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|164685701|ref|ZP_01946749.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
gi|164601208|gb|EAX32616.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
Length = 574
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 46/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEAL+SIS V+ LT+ ++ K + YR
Sbjct: 63 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMGYR 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT-VEHTLVPLMKSQYQPSEKIVE 185
+M Q D + + +Y T + +++Q +I+E
Sbjct: 123 ISNISHKIMTPVPAAHPQGTTIDVQDL-------FYNTPARRKFLRSPATEFQHIRRIIE 175
Query: 186 RACLLEIAS-----LNNLELL------SVEGTD--------DAFQ------------LKV 214
R L + N E++ ++ G + D F L +
Sbjct: 176 RLALSHFTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIEFSQSGLTL 235
Query: 215 TGWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G+I ++ + +++N I + + Q Y L G P L L +DP
Sbjct: 236 KGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPA 295
Query: 268 NVDVNVHPTKHEVHF 282
VD+NVHPTKHEV F
Sbjct: 296 FVDINVHPTKHEVRF 310
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 19 VVERPASVVKELIENSIDA-----HASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEAL+SIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 74 RHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 134 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 192
Query: 468 ENLADIRTNVNSSHSE-----VIGNIY 489
+ + + S E ++G+++
Sbjct: 193 KEIIHFKPATTISGQENRIKSILGDVF 219
>gi|452205365|ref|YP_007485494.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi BTF08]
gi|452112421|gb|AGG08152.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi BTF08]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 170/335 (50%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RPA+ +KELLENSLDA++ + + +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 ITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS---EKI 183
TYL +L+ EM ++ + + + + + V L L Q++ S E +
Sbjct: 121 --TYL----SLSGGEMLKHTRMARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVV 174
Query: 184 VERACL-------LEIASLNNLE----------LLSVEGTDDAFQL-------------K 213
V A L + N L +L V G+D A ++
Sbjct: 175 VSYALAYPEVKFSLNVDGRNTLNTPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N ++R +EQ YS L G +P +++ +
Sbjct: 235 ISGLVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E + VQ + L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLV 329
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S ++ + + +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPASVVKELLENS-----LDAEAKRVDIVIREGGIGYIEVSDDGCGITSSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESGTYLSLSGGEMLKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A GT I LF +P R K LK P E +K+ +VV YA+ P V F+L
Sbjct: 134 TR-MARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALAYPEVKFSLNVDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + +YG++ + ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEVYGSDAASKM 220
>gi|440300958|gb|ELP93405.1| DNA mismatch repair protein MlH1, putative [Entamoeba invadens IP1]
Length = 713
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 43/350 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++LD T +N+I AGEVIQRP N +KEL+ENS+DAK+T+I V+VKQGGL + + DNG
Sbjct: 3 QIRRLDTTTINKIGAGEVIQRPYNVVKELIENSIDAKATTINVSVKQGGLSQISVIDNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G ED+ +V ER+ TSK + T+G+RGEAL+ ++++A +TI T+ S AY
Sbjct: 63 GFSPEDLKMVGERYMTSKNIGGD------TYGYRGEALSCMTYLAKVTITTRQAMSEVAY 116
Query: 126 RWCT----YLADLMALA-----LMEMSQYLQRDKEQIGDKEEKQWYRTVE--------HT 168
+ D+ A ++ + + + G KE +++ R +E +
Sbjct: 117 KVVISDGKIQGDIQPTAGEVGTIVIVEDLFKNMPRKRGMKEGEEYSRIIEVVGNYAIHNA 176
Query: 169 LVP--LMKSQYQPSE-KIVERACLLE-------IASLNNLELLSVEGTDDAFQLKVTGWI 218
L+ L KS + K ++ +L I + L S + + F + + ++
Sbjct: 177 LISFTLRKSGTASCDIKTNNKSTILANISKIHTIRTAETLHQFSKQNEEPPFSMDL--FL 234
Query: 219 TNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
++ + KK F+LFINN +K++ E+ Y +PK S FVY+S+ ++ + +D N
Sbjct: 235 SDSGYDGKKNIFILFINNRYVEFPALKKIFERSYEENIPKVSH-FVYMSVEVEKERIDAN 293
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFY-TQSTSIQVTVK 321
V+P+K V L E+ ++ + + L + F+ TQ+ + + +K
Sbjct: 294 VNPSKTAVRLLEEEKVLSAIDKFINVNLAQLGQVKTFFPTQAKTQPLQIK 343
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+I V+VKQGGL + + DNG G ED+ +V ER+ TSK + T+G+RGE
Sbjct: 39 KATTINVSVKQGGLSQISVIDNGIGFSPEDLKMVGERYMTSKNIGGD------TYGYRGE 92
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
AL+ ++++A +TI T+ S AY+ D K++ I+P AG GT +I EDLF N+P R
Sbjct: 93 ALSCMTYLAKVTITTRQAMSEVAYKVVISDGKIQGDIQPTAGEVGTIVIVEDLFKNMP-R 151
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
++ +K+ EEY++I +VV YA+HN + FTL+K DI+TN S+ I I+
Sbjct: 152 KRGMKE-GEEYSRIIEVVGNYAIHNALISFTLRKSGTASCDIKTNNKSTILANISKIHTI 210
Query: 492 NISRRVRRFSSASQ 505
+ + +FS ++
Sbjct: 211 RTAETLHQFSKQNE 224
>gi|326202165|ref|ZP_08192035.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
gi|325987960|gb|EGD48786.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
Length = 664
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 166/324 (51%), Gaps = 53/324 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I LDE N+IAAGEV+++PA+ +KEL+ENS+DA +TSI V +K GG+ ++I DNG+
Sbjct: 3 RIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGISYIKITDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
G+ ++D++I ER TSK+ + EDL+S+ T GFRGEALASI+ VA + ++TKT S
Sbjct: 63 GMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEALASIASVASVELMTKTAASTYGM 122
Query: 123 ----------------CAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
C + DL ++L++D + G +
Sbjct: 123 YVHIRGGVFQDVRQTGCPVGTTFIIKDLF-FNTPARYKFLKKDSTEAG---------YIS 172
Query: 167 HTLVPLMKSQYQPSEKIVE-RACLLEIASLNNL--------------ELLSVEGTDDAFQ 211
T+ + S K+ + L+ N+L +L++VE D+ +
Sbjct: 173 DTISRIALGNPDISFKLTNGKTTLIHTPGNNDLKSVIYSIYGKELIKDLVAVEYADE--K 230
Query: 212 LKVTGWI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+K++G++ +N N+ + + + + +EQ ++ L K FPF L++ +
Sbjct: 231 IKISGYVGKPEAARSNRNYQSLYINKRYVKSKMVSYSVEQAFTSILMKNRFPFFVLNIDI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTI 288
+P VD NVHP K EV F E +
Sbjct: 291 NPVLVDANVHPAKTEVRFADESNL 314
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI V +K GG+ ++I DNG+G+ ++D++I ER TSK+ + EDL+S+ T GFRGEA
Sbjct: 40 ATSISVDIKNGGISYIKITDNGSGMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ VA + ++TKT S +D ++ GT I +DLF+N P R
Sbjct: 100 LASIASVASVELMTKTAASTYGMYVHIRGGVFQD-VRQTGCPVGTTFIIKDLFFNTPARY 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK+ S E I+D +SR A+ NP + F L L I T N+ VI +IYG
Sbjct: 159 KFLKKDSTEAGYISDTISRIALGNPDISFKLTNGKTTL--IHTPGNNDLKSVIYSIYGKE 216
Query: 493 I 493
+
Sbjct: 217 L 217
>gi|257124945|ref|YP_003163059.1| DNA mismatch repair protein MutL [Leptotrichia buccalis C-1013-b]
gi|257048884|gb|ACV38068.1| DNA mismatch repair protein MutL [Leptotrichia buccalis C-1013-b]
Length = 691
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 168/320 (52%), Gaps = 39/320 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE V N IAAGEV++ PA+ +KE++ENSLDAK+T I++ V + G + ++ DNG G
Sbjct: 4 IKILDEKVSNIIAAGEVVENPASMIKEMIENSLDAKATMIKIEVFKAGTDV-KVSDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+D + ER TSK+ + ED+ +++T+GFRGEAL+SI+ V+ LTI T+++ SP Y+
Sbjct: 63 MDKDDTLLSVERHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYK 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEKI 183
Y + E+S+ +G + E + +Y T + M ++Y I
Sbjct: 123 IGCYGG--VVRKFEEVSR-------NVGTEMEVRDLFYNTPARRKFLRKMSTEYGKIRDI 173
Query: 184 VERACLLEIASLNNLEL-------LSVEGTDDA----FQLKVT--------GWITNVNFS 224
V + L +LEL S +G D+ F V G++ NV
Sbjct: 174 VLKEALSNSNVAFSLELDGKSTIKTSGKGIDNTILELFGKSVLRNLKKFEYGYLGNVEIL 233
Query: 225 TKKMTFLL-FINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
F+ F+NN I+R + Y L KG +PF + DPK +DVNVHP+K
Sbjct: 234 RSSKDFMFTFVNNRYVKSATIERAVIDGYYTKLMKGKYPFAIIFYNTDPKEIDVNVHPSK 293
Query: 278 HEVHFLHEDTIIERVQSMLE 297
+ F ++ + ++S ++
Sbjct: 294 KIIKFSNDKIVYNEIKSAID 313
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 127/216 (58%), Gaps = 16/216 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++E SM+++ + S ++T I++ V + G + ++ DNG G+ K+D + E
Sbjct: 20 VVENPASMIKEMIENS-----LDAKATMIKIEVFKAGTDV-KVSDNGIGMDKDDTLLSVE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + ED+ +++T+GFRGEAL+SI+ V+ LTI T+++ SP Y+ ++
Sbjct: 74 RHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYKIGCYGGVVR-K 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ + N GT++ DLFYN P RRK L++ S EY KI D+V + A+ N +V F+L+
Sbjct: 133 FEEVSRNVGTEMEVRDLFYNTPARRKFLRKMSTEYGKIRDIVLKEALSNSNVAFSLE--- 189
Query: 468 ENLADIRTNVNSSHSEV---IGNIYGNNISRRVRRF 500
D ++ + +S + I ++G ++ R +++F
Sbjct: 190 ---LDGKSTIKTSGKGIDNTILELFGKSVLRNLKKF 222
>gi|147669646|ref|YP_001214464.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1]
gi|146270594|gb|ABQ17586.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 170/335 (50%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RPA+ +KELLENSLDA++ + + +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 ITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS---EKI 183
TYL +L+ EM ++ + + + + + V L L Q++ S E +
Sbjct: 121 --TYL----SLSGGEMLKHTRMARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVV 174
Query: 184 VERACL-------LEIASLNNLE----------LLSVEGTDDAFQL-------------K 213
V A L + N L +L V G+D A ++
Sbjct: 175 VSYALAYPEVKFSLNVDGRNTLNTPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N ++R +EQ YS L G +P +++ +
Sbjct: 235 ISGLVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E + VQ + L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLV 329
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S ++ + + +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPASVVKELLENS-----LDAEAKRVDIVIREGGIGYIEVSDDGCGITSSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESGTYLSLSGGEMLKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A GT I LF +P R K LK P E +K+ +VV YA+ P V F+L
Sbjct: 134 TR-MARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALAYPEVKFSLNVDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + +YG++ + ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEVYGSDAASKM 220
>gi|402306075|ref|ZP_10825127.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
sputorum HK 2154]
gi|400375490|gb|EJP28389.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
sputorum HK 2154]
Length = 628
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 168/346 (48%), Gaps = 71/346 (20%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG G
Sbjct: 7 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK+ EDL I + GFRGEALASIS V+ LT+ ++ + A
Sbjct: 67 IAKQDLALALARHATSKIASLEDLEMILSLGFRGEALASISSVSRLTLTSRPEGQ--AEA 124
Query: 127 WCTYL-ADLMALALMEMS--------------------QYLQRDKEQIGDKEE------- 158
W Y MA+ + S ++L+ DK + G +E
Sbjct: 125 WLAYAEGREMAVEIRPASHPVGTTTEVANLFFNTPARRKFLRTDKTEFGHIDEVVRRIAL 184
Query: 159 ---------------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLE-IASLNNLELLS 202
+ YR V+ V + ++ V C E IA N+++
Sbjct: 185 AKPNVSFTLTHNGKVVRQYRKVQDNSV-------EQQQRRVAAICGDEFIAHANHIDWQH 237
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVYSIYLPKGSF 255
+ L + GWI + F++ + ++N + R I Q Y L G +
Sbjct: 238 GD-------LHLHGWIGSPQFTSAQNDLCYSYVNGRMMRDKTINHAIRQAYGECLSAGEY 290
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
P L L ++P+ VDVNVHP KHEV F L D I++ V LE
Sbjct: 291 PAFVLFLDINPQQVDVNVHPAKHEVRFHQARLVHDFILQGVLQGLE 336
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 91/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK+ EDL I + GFRGEA
Sbjct: 43 ANQIQIDIEKGGAQLIRIRDNGCGIAKQDLALALARHATSKIASLEDLEMILSLGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ + A+ A ++ I+P + GT +LF+N P RR
Sbjct: 103 LASISSVSRLTLTSRPEGQAEAWLAYAEGREMAVEIRPASHPVGTTTEVANLFFNTPARR 162
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +VV R A+ P+V FTL
Sbjct: 163 KFLRTDKTEFGHIDEVVRRIALAKPNVSFTL 193
>gi|113461226|ref|YP_719295.1| DNA mismatch repair protein [Haemophilus somnus 129PT]
gi|122945347|sp|Q0I463.1|MUTL_HAES1 RecName: Full=DNA mismatch repair protein MutL
gi|112823269|gb|ABI25358.1| DNA mismatch repair protein MutL [Haemophilus somnus 129PT]
Length = 615
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 161/322 (50%), Gaps = 44/322 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILPPQLANQIAAGEVVERPASVVKELIENSLDAGATHIQIEIENGGANLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IAKDELHLALARHATSKIASLDDLEMILSLGFRGEALASISSVSRLTLTSRTAQQNEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------- 158
D M ++ S ++L+ DK + +E
Sbjct: 123 VYAQGRD-METSITPASHPIGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALA 181
Query: 159 -KQWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVT 215
Q T+ H L+ KS +KI A + + N + + D L ++
Sbjct: 182 KPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGNDFMQNALHIDWKHND----LHLS 237
Query: 216 GWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ F+ + +IN + R I Q YS YL +P L + ++P
Sbjct: 238 GWVIQPQFARHQNDLNYCYINGRMVRDKVITHAIRQAYSEYLNNEQYPAFVLFIDLNPNE 297
Query: 269 VDVNVHPTKHEVHFLHEDTIIE 290
VDVNVHPTKHEV F H+ +I
Sbjct: 298 VDVNVHPTKHEVRF-HQARLIH 318
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL I + GFRGEA
Sbjct: 39 ATHIQIEIENGGANLIRIRDNGIGIAKDELHLALARHATSKIASLDDLEMILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ ++ I P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAQQNEAWQVYAQGRDMETSITPASHPIGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV-NSSHSEVIGNIYGN 491
K L+ E+ I +V+ R A+ P V FTL N+ + ++ V N + I I GN
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGN 218
Query: 492 NI 493
+
Sbjct: 219 DF 220
>gi|423359246|ref|ZP_17336749.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
gi|401085118|gb|EJP93364.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
Length = 647
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ +TG+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTITGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|452203868|ref|YP_007484001.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi DCMB5]
gi|452110927|gb|AGG06659.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi DCMB5]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RPA+ +KELLENSLDA++ + + +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 ITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS---EKI 183
TYL +L+ EM ++ + + + + V L L Q++ S E +
Sbjct: 121 --TYL----SLSGGEMLKHTRMARAAGTSIRLSRLFSRVPARLKFLKTPQHEASKVTEVV 174
Query: 184 VERACL-------LEIASLNNLE----------LLSVEGTDDAFQL-------------K 213
V A L + N L +L V G+D A ++
Sbjct: 175 VSYALAYPEVKFSLNVDGRNTLNTPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N ++R +EQ YS L G +P +++ +
Sbjct: 235 ISGLVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E + VQ + L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLV 329
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S ++ + + +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPASVVKELLENS-----LDAEAKRVDIVIREGGIGYIEVSDDGCGITSSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +I++ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESGTYLSLSGGEMLKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A GT I LF +P R K LK P E +K+ +VV YA+ P V F+L
Sbjct: 134 TR-MARAAGTSIRLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALAYPEVKFSLNVDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + +YG++ + ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEVYGSDAASKM 220
>gi|289424087|ref|ZP_06425873.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
gi|289155512|gb|EFD04191.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
Length = 627
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 174/330 (52%), Gaps = 35/330 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI LD++ +N+IAAGEV++RP++ +KEL+ENS+DA S+ I + ++ GG L++I DNG+
Sbjct: 3 KINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKDLIRIVDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D++ R TSK+ EDL+S+ + GFRGEALASIS V+ L ++TKT+ +
Sbjct: 63 GIDKDDVNKAFLRHATSKINTVEDLSSLESLGFRGEALASISAVSKLEMLTKTEEALIGL 122
Query: 126 RWC---TYLADLMALALMEMSQYLQRD---------KEQIGDKEEKQWYRTVEHTLV--- 170
R + + A + +Q RD K ++ E Q + + +
Sbjct: 123 RIVLDGGKIREKEATSANRGTQISVRDLFFNTPARRKFLKSNQAEAQAITDIVNKIAIGN 182
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQL----------KVTGWITN 220
P +K +Y + K + L + + +N + + + G D + L ++G++ N
Sbjct: 183 PSIKIKYINNSKTI-YETLGDGSIINAIRM--IYGRDISENLIEIDYRSKYFSISGYLGN 239
Query: 221 VN-FSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N + + L+IN I + I Y +P +P ++++ +DP VDVN+
Sbjct: 240 NNIYRGNRNHQHLYINGRYIKSPNISKKINDAYKAIIPINKYPIYFVNISVDPAKVDVNI 299
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
HP+K EV F E+ I+ + + LL S
Sbjct: 300 HPSKLEVKFDQEEEILNELSDFVRGILLKS 329
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S+ I + ++ GG L++I DNG+GI K+D++
Sbjct: 20 VVERPSSIIKELVENS-----IDAGSSYISIEIENGGKDLIRIVDNGSGIDKDDVNKAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL+S+ + GFRGEALASIS V+ L ++TKT+ + R K+++
Sbjct: 75 RHATSKINTVEDLSSLESLGFRGEALASISAVSKLEMLTKTEEALIGLRIVLDGGKIREK 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ + N+GTQI DLF+N P RRK LK E I D+V++ A+ NP + +K N
Sbjct: 135 -EATSANRGTQISVRDLFFNTPARRKFLKSNQAEAQAITDIVNKIAIGNPSI--KIKYIN 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ T + S I IYG +IS
Sbjct: 192 NSKTIYETLGDGSIINAIRMIYGRDIS 218
>gi|420598714|ref|ZP_15091393.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-11]
gi|420604249|ref|ZP_15096324.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-12]
gi|420630499|ref|ZP_15119866.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-19]
gi|420635630|ref|ZP_15124453.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-25]
gi|420678614|ref|ZP_15163315.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-47]
gi|420706242|ref|ZP_15187166.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-55]
gi|420728187|ref|ZP_15206543.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-60]
gi|420738747|ref|ZP_15216069.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-63]
gi|420749863|ref|ZP_15225695.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-65]
gi|420771255|ref|ZP_15244280.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-76]
gi|420776549|ref|ZP_15249058.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-88]
gi|420814433|ref|ZP_15282895.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-95]
gi|420819567|ref|ZP_15287556.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-96]
gi|420835299|ref|ZP_15301704.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-100]
gi|420846031|ref|ZP_15311427.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-102]
gi|391482732|gb|EIR39158.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-12]
gi|391482923|gb|EIR39329.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-11]
gi|391514204|gb|EIR67338.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-19]
gi|391516032|gb|EIR68965.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-25]
gi|391562459|gb|EIS10868.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-47]
gi|391588799|gb|EIS33777.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-55]
gi|391605736|gb|EIS48573.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-60]
gi|391621164|gb|EIS62244.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-63]
gi|391631745|gb|EIS71344.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-65]
gi|391655473|gb|EIS92212.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-76]
gi|391662381|gb|EIS98319.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-88]
gi|391700866|gb|EIT32924.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-95]
gi|391704004|gb|EIT35697.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-96]
gi|391720320|gb|EIT50355.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-100]
gi|391731486|gb|EIT60187.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-102]
Length = 392
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|422300338|ref|ZP_16387858.1| DNA mismatch repair protein MutL [Pseudomonas avellanae BPIC 631]
gi|407987495|gb|EKG30285.1| DNA mismatch repair protein MutL [Pseudomonas avellanae BPIC 631]
Length = 647
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G+
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGS 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ +
Sbjct: 142 QVETEGRD--------MDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I + V+Q G+KLL+++D+G+GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDIDVEQAGIKLLKVRDDGSGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMDAR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|359298740|ref|ZP_09184579.1| DNA mismatch repair protein [Haemophilus [parainfluenzae] CCUG
13788]
Length = 628
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 168/346 (48%), Gaps = 71/346 (20%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG G
Sbjct: 7 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK+ EDL I + GFRGEALASIS V+ LT+ ++ + A
Sbjct: 67 IAKQDLALALARHATSKIASLEDLEMILSLGFRGEALASISSVSRLTLTSRPEGQ--AEA 124
Query: 127 WCTYL-ADLMALALMEMS--------------------QYLQRDKEQIGDKEE------- 158
W Y MA+ + S ++L+ DK + G +E
Sbjct: 125 WLAYAEGREMAVEIRPASHPVGTTTEVANLFFNTPARRKFLRTDKTEFGHIDEVVRRIAL 184
Query: 159 ---------------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLE-IASLNNLELLS 202
+ YR V+ V + ++ V C E IA N+++
Sbjct: 185 AKPNVSFTLTHNGKVVRQYRKVQDNSV-------EQQQRRVAAICGDEFIAHANHIDWQH 237
Query: 203 VEGTDDAFQLKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVYSIYLPKGSF 255
+ L + GWI + F++ + ++N + R I Q Y L G +
Sbjct: 238 GD-------LHLHGWIGSPQFTSAQNDLCYSYVNGRMMRDKTINHAIRQAYGECLSAGEY 290
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
P L L ++P+ VDVNVHP KHEV F L D I++ V LE
Sbjct: 291 PAFVLFLDINPQQVDVNVHPAKHEVRFHQARLVHDFILQGVLQGLE 336
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + IQ+ +++GG +L++I+DNG GI K+D+ +
Sbjct: 23 VVERPASVVKELVENS-----LDAGANQIQIDIEKGGAQLIRIRDNGCGIAKQDLALALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL I + GFRGEALASIS V+ LT+ ++ + A+ A ++
Sbjct: 78 RHATSKIASLEDLEMILSLGFRGEALASISSVSRLTLTSRPEGQAEAWLAYAEGREMAVE 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
I+P + GT +LF+N P RRK L+ E+ I +VV R A+ P+V FTL
Sbjct: 138 IRPASHPVGTTTEVANLFFNTPARRKFLRTDKTEFGHIDEVVRRIALAKPNVSFTL 193
>gi|116513153|ref|YP_812060.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
SK11]
gi|385839547|ref|YP_005877177.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
gi|123025082|sp|Q02VS5.1|MUTL_LACLS RecName: Full=DNA mismatch repair protein MutL
gi|116108807|gb|ABJ73947.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris SK11]
gi|358750775|gb|AEU41754.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
Length = 656
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 168/326 (51%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I V+V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI----------- 114
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGT 122
Query: 115 --ITKTKT----SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
I K T P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLIAKGGTIETLEPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ + G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFEL--TGYVSLP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DPK DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 301 PTKQEVRLSKERELMTLISKAIDEAL 326
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I V+V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKITVSVEEAGLRLIEVTDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSNAQEEAGTKLIAKGGTI-ETLEPLAKRLGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R + +
Sbjct: 217 TAKKMREINGS 227
>gi|218898868|ref|YP_002447279.1| DNA mismatch repair protein [Bacillus cereus G9842]
gi|423561824|ref|ZP_17538100.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
gi|226723027|sp|B7ITM0.1|MUTL_BACC2 RecName: Full=DNA mismatch repair protein MutL
gi|218541786|gb|ACK94180.1| DNA mismatch repair protein MutL [Bacillus cereus G9842]
gi|401202081|gb|EJR08946.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
Length = 647
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ +TG+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTITGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|228966711|ref|ZP_04127755.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402558904|ref|YP_006601628.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
gi|228792810|gb|EEM40368.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401787556|gb|AFQ13595.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
Length = 647
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ +TG+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTITGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|170717827|ref|YP_001784888.1| DNA mismatch repair protein [Haemophilus somnus 2336]
gi|189030401|sp|B0UUU5.1|MUTL_HAES2 RecName: Full=DNA mismatch repair protein MutL
gi|168825956|gb|ACA31327.1| DNA mismatch repair protein MutL [Haemophilus somnus 2336]
Length = 615
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 160/322 (49%), Gaps = 44/322 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++ GG L++I+DNG G
Sbjct: 3 IKILPPQLANQIAAGEVVERPASVVKELIENSLDAGATHIQIEIENGGANLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IAKDELHLALARHATSKIASLDDLEMILSLGFRGEALASISSVSRLTLTSRTAQQNEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------- 158
D M ++ S ++L+ DK + +E
Sbjct: 123 VYAQGRD-METSITPASHPIGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALA 181
Query: 159 -KQWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVT 215
Q T+ H L+ KS +KI A + + N + + D L ++
Sbjct: 182 KPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGNDFMQNALHIDWKHND----LHLS 237
Query: 216 GWITNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ F+ + +IN I I Q YS YL +P L + ++P
Sbjct: 238 GWVIQPQFARHQNDLNYCYINGRMVKDKVITHAIRQAYSEYLSNEKYPAFVLFIDLNPNE 297
Query: 269 VDVNVHPTKHEVHFLHEDTIIE 290
VDVNVHPTKHEV F H+ +I
Sbjct: 298 VDVNVHPTKHEVRF-HQARLIH 318
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++ GG L++I+DNG GI K+++ + R TSK+ +DL I + GFRGEA
Sbjct: 39 ATHIQIEIENGGANLIRIRDNGIGIAKDELHLALARHATSKIASLDDLEMILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ ++ I P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAQQNEAWQVYAQGRDMETSITPASHPIGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV-NSSHSEVIGNIYGN 491
K L+ E+ I +V+ R A+ P V FTL N+ + ++ V N + I I GN
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGN 218
Query: 492 NI 493
+
Sbjct: 219 DF 220
>gi|228909592|ref|ZP_04073415.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
gi|228849881|gb|EEM94712.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
Length = 647
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ +TG+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTITGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|452746777|ref|ZP_21946587.1| DNA mismatch repair protein [Pseudomonas stutzeri NF13]
gi|452009254|gb|EME01477.1| DNA mismatch repair protein [Pseudomonas stutzeri NF13]
Length = 625
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 162/323 (50%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + +I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL++
Sbjct: 1 MSEVARIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGCGIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T EM +Q +G E + ++ T + K+++
Sbjct: 121 AGEAWQVET--------EGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDDAFQ-------------------- 211
+++++R L ++A N +L++ + DDA +
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKVVLALHQAEDDAARARRVASVCGPAFLEQALPIE 232
Query: 212 -----LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L++ GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLRLWGWVGLPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLDVDPAVVDVNVHPTKHEVRF 315
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELLENSLDS-----GARRIDVDVEQGGVKLLRVRDDGCGIPPDDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS V+ LT+ ++T + A++ +++
Sbjct: 78 RHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTADAGEAWQVETEGREMEAR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALARFDVAFHLR 194
>gi|423469981|ref|ZP_17446725.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
gi|402437233|gb|EJV69257.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
Length = 648
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 170/330 (51%), Gaps = 42/330 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIRQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E +++ ++ L+ T
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQDTF 325
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D I+ A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIRQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|420571897|ref|ZP_15067188.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-06]
gi|391451789|gb|EIR11255.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-06]
Length = 396
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420555577|ref|ZP_15052608.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-03]
gi|391436368|gb|EIQ97330.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-03]
Length = 382
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|294139254|ref|YP_003555232.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
gi|293325723|dbj|BAJ00454.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
Length = 619
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 184/338 (54%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKEELSLALSRHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWY---- 162
+D MA+ ++ + ++L+ DK + +E W
Sbjct: 123 AYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRIA 179
Query: 163 ---RTVEHTLVPLMK--SQYQP---SEKIVERACLLEIASLN-NLELLSVEGTDDAFQLK 213
R + TL K ++P S++ ++R L +++ L+ L+VE + LK
Sbjct: 180 LVSRDIHFTLKNNGKVVRNFRPAKTSDQYLQR--LAQVSGKKFALQALAVECEHEG--LK 235
Query: 214 VTGWITNVNF-STKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G+I + F + T ++N + R + Q ++ ++ +V L L +DP
Sbjct: 236 LSGYIQSPYFEGSASDTQYFYVNGRLVRDRLVNHAVRQAFAEHVTGAQASYV-LMLELDP 294
Query: 267 KNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKT 299
VDVNVHP KHEV F H+ D I + +QS L +
Sbjct: 295 HQVDVNVHPAKHEVRF-HQSRYVHDYIFQALQSALSQV 331
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I DNG+GI KE++ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIEKGGSKLIKIHDNGSGIPKEELSLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++A S +
Sbjct: 74 RHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGSDMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ + A DLF+N P RR+ LK E+ I + + R A+ + + FTLK
Sbjct: 134 VIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVSRDIHFTLKNNG 193
Query: 468 ENLADIR 474
+ + + R
Sbjct: 194 KVVRNFR 200
>gi|359786585|ref|ZP_09289705.1| DNA mismatch repair protein [Halomonas sp. GFAJ-1]
gi|359296116|gb|EHK60370.1| DNA mismatch repair protein [Halomonas sp. GFAJ-1]
Length = 638
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 157/318 (49%), Gaps = 48/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I LD + N+IAAGEV++RP++ KEL+EN++DA S I+V ++QGG +L++++D+G
Sbjct: 2 RIHVLDPRLANQIAAGEVVERPSSVTKELIENAIDAGSQRIEVEIEQGGARLIKVRDDGI 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT--------- 116
GI ++D+ + R TSK+ EDL +S+ GFRGEALASIS V+ L +++
Sbjct: 62 GIGEQDLPLALARHATSKINSLEDLEGVSSLGFRGEALASISSVSRLELVSNAEDDPRQG 121
Query: 117 ----------KTKTSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEEK----- 159
+ + +P + T +A DL ++L+ +K + EE
Sbjct: 122 WRVVAEGRGMEARVTPAPHPRGTSVAVRDLF-FNTPARRKFLRTEKTEFAHVEEAFRRQA 180
Query: 160 ------QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
W +V + P+ + A LL + + + + E A L+
Sbjct: 181 LSRYDIAWVLRHNQKVVHQLPPGATPAARERRIASLLGKSFIEHARYIERE----AGGLR 236
Query: 214 VTGWI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
++GW+ T+ + F F+N + R + Q Y L G P L L +
Sbjct: 237 LSGWVGLPTHSRSQADQQYF--FVNGRVVRDRLVAHAVRQAYRDVLFNGRHPVFVLYLEL 294
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 295 DPDVVDVNVHPTKHEVRF 312
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I+V ++QGG +L++++D+G GI ++D+ + R TSK+ EDL +S+ GFRGEA
Sbjct: 39 SQRIEVEIEQGGARLIKVRDDGIGIGEQDLPLALARHATSKINSLEDLEGVSSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSP-CAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L +++ + P +R ++ + P +GT + DLF+N P R
Sbjct: 99 LASISSVSRLELVSNAEDDPRQGWRVVAEGRGMEARVTPAPHPRGTSVAVRDLFFNTPAR 158
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
RK L+ E+ + + R A+ + + L+
Sbjct: 159 RKFLRTEKTEFAHVEEAFRRQALSRYDIAWVLR 191
>gi|307258062|ref|ZP_07539814.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863425|gb|EFM95356.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 661
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 169/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 43 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 102
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ + A
Sbjct: 103 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPEGQ--A 160
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 161 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 214
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 215 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 274
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 275 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 334
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 335 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 375
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 99/162 (61%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 81 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 140
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ + A++A +++ I+P + GT I +LF+N P RR
Sbjct: 141 LASISSVSRLTLTSRPEGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 200
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 201 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 242
>gi|53729030|ref|ZP_00134309.2| COG0323: DNA mismatch repair enzyme (predicted ATPase)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209412|ref|YP_001054637.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|303251733|ref|ZP_07337904.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307249031|ref|ZP_07531039.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251230|ref|ZP_07533151.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307262460|ref|ZP_07544105.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126098204|gb|ABN75032.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302649163|gb|EFL79348.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854489|gb|EFM86684.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856746|gb|EFM88881.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306867837|gb|EFM99668.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 622
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 4 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 64 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 122 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 175
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 176 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 235
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 236 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 295
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 296 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 336
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 42 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 102 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 161
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 162 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 203
>gi|423452930|ref|ZP_17429783.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
gi|401139489|gb|EJQ47051.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
Length = 648
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 170/330 (51%), Gaps = 42/330 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIRQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E +++ ++ L+ T
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQDTF 325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D I+ A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIRQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|152976134|ref|YP_001375651.1| DNA mismatch repair protein [Bacillus cytotoxicus NVH 391-98]
gi|189030390|sp|A7GR98.1|MUTL_BACCN RecName: Full=DNA mismatch repair protein MutL
gi|152024886|gb|ABS22656.1| DNA mismatch repair protein MutL [Bacillus cytotoxicus NVH 391-98]
Length = 649
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLDE + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDEQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L ++T T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGEIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + ++K++ R L I S+ +L+ +E ++ + G+
Sbjct: 180 SHPEVSL--KLFHNTKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEA--ESLDFTIRGY 235
Query: 218 ITNVNFSTKKMTFLLFI-------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLQFIEQTLQ 322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L ++T T +P +++ K + IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELVTSTGDAP----GTHLIIKGGEIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNTKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|414075210|ref|YP_007000427.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
gi|413975130|gb|AFW92594.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 656
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 168/326 (51%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I V+V++ GL+L+++ DNG
Sbjct: 3 KIIELNEGLANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI----------- 114
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGT 122
Query: 115 --ITKTKT----SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
I K T P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLIAKGGTIETLEPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ + G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFEL--TGYVSLP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DPK DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 301 PTKQEVRLSKERELMTLISKAIDEAL 326
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I V+V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKITVSVEEAGLRLIEVTDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSNAQEEAGTKLIAKGGTI-ETLEPLAKRLGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R + +
Sbjct: 217 TAKKMREINGS 227
>gi|262038761|ref|ZP_06012118.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264]
gi|261747219|gb|EEY34701.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264]
Length = 648
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 177/333 (53%), Gaps = 51/333 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE+V N IAAGEV++ PA+ +KE++ENSLDAK+T I++ V +GG+ + +I DNG G
Sbjct: 4 IKILDESVSNIIAAGEVVENPASMIKEMIENSLDAKATIIKIEVFKGGMDV-KINDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+D + ER TSK++ +D+ +++T+GFRGEALASI+ V+ LTI T+++ S Y+
Sbjct: 63 MDKDDTLLSIERHATSKISTKDDVFNLNTYGFRGEALASIAAVSKLTITTRSENSSTGYK 122
Query: 127 WCTYLADLMALALMEMSQYLQ-----RD-------KEQIGDKEEKQWYR----------- 163
+Y + E+S+ + RD +++ KE ++ +
Sbjct: 123 IGSYGG--VVRKFEEVSRNVGTEIEVRDLFYNTPARKKFLRKESTEYNKIKDIVLKEALA 180
Query: 164 --TVEHTLVPLMKSQYQPSEKIVERAC--LLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
V TL K S K +E A L + L NL+ G++
Sbjct: 181 NSDVAFTLEFDGKQSVNTSGKGIENAILELFGKSVLRNLKKFEY------------GYLG 228
Query: 220 NVNF--STKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
NV S+K F ++N N I+R + Y L KG +PFV + +DPK +DV
Sbjct: 229 NVEILRSSKDYIF-TYVNKRYVKSNTIERAVIDGYYTKLMKGKYPFVIIFFDIDPKEIDV 287
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
NVHP+K V F ++ + ++++ +++ S+
Sbjct: 288 NVHPSKKIVKFSNDKIVYKQIKDAIDEYFYQSD 320
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 130/216 (60%), Gaps = 16/216 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++E SM+++ + S ++ +T I++ V +GG+ + +I DNG G+ K+D + E
Sbjct: 20 VVENPASMIKEMIENSLDAK-----ATIIKIEVFKGGMDV-KINDNGIGMDKDDTLLSIE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +D+ +++T+GFRGEALASI+ V+ LTI T+++ S Y+ ++
Sbjct: 74 RHATSKISTKDDVFNLNTYGFRGEALASIAAVSKLTITTRSENSSTGYKIGSYGGVVR-K 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ + N GT+I DLFYN P R+K L++ S EYNKI D+V + A+ N V FTL+
Sbjct: 133 FEEVSRNVGTEIEVRDLFYNTPARKKFLRKESTEYNKIKDIVLKEALANSDVAFTLE--- 189
Query: 468 ENLADIRTNVNSSHSEV---IGNIYGNNISRRVRRF 500
D + +VN+S + I ++G ++ R +++F
Sbjct: 190 ---FDGKQSVNTSGKGIENAILELFGKSVLRNLKKF 222
>gi|420689010|ref|ZP_15172607.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-52]
gi|391576701|gb|EIS23219.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-52]
Length = 380
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|398338575|ref|ZP_10523278.1| DNA mismatch repair protein [Leptospira kirschneri serovar Bim str.
1051]
Length = 593
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDACATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 RWCT------------------YLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ + L + + ++L+ RD+ Q +
Sbjct: 123 KIGSIAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPARENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ I K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKIGSIAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPARENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|425070242|ref|ZP_18473356.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
gi|404595508|gb|EKA96048.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
Length = 669
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 36/317 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLDA +T+I + + +GG KL++I+DNG G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++
Sbjct: 63 ISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------K 159
D M +A+ + ++L+ +K + G +E
Sbjct: 123 AYAEGRD-MTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALS 181
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
++ ++ T QY+ +++ + L N+ +++ T + L + GW+
Sbjct: 182 RFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWVE 241
Query: 220 N----VNFSTKKMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ V S + ++ + + I I Q Y YL P L L +DP VDVN
Sbjct: 242 HPLAPVQSSEVQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDVN 301
Query: 273 VHPTKHEVHFLHEDTII 289
VHP KHEV F HE ++
Sbjct: 302 VHPAKHEVRF-HESRLV 317
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T+I + + +GG KL++I+DNG GI ++D+ +
Sbjct: 19 VVERPASVVKELLENS-----LDAGATTIDIDIDKGGAKLIRIRDNGCGISRDDLKLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++A +
Sbjct: 74 RHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQAYAEGRDMTVA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A G+ + DLFYN P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 VKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVSINLTHNG 193
Query: 468 ENLADIRTNVNS-SHSEVIGNIYGNNI 493
+ + R + H + I GN+
Sbjct: 194 KRVRQYRAAKETHQHHRRLSAICGNHF 220
>gi|165977401|ref|YP_001652994.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|238687528|sp|B0BTY3.1|MUTL_ACTPJ RecName: Full=DNA mismatch repair protein MutL
gi|165877502|gb|ABY70550.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 622
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 4 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 64 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 122 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 175
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 176 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 235
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 236 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 295
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 296 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 336
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 42 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 102 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 161
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 162 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 203
>gi|420787499|ref|ZP_15258660.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-90]
gi|391668992|gb|EIT04171.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-90]
Length = 343
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|75760973|ref|ZP_00740979.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902271|ref|ZP_04066431.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|434376826|ref|YP_006611470.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
gi|74491537|gb|EAO54747.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228857386|gb|EEN01886.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|401875383|gb|AFQ27550.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
Length = 654
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ +TG+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTITGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|420609578|ref|ZP_15101164.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-13]
gi|420754936|ref|ZP_15230235.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-66]
gi|391496917|gb|EIR51822.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-13]
gi|391648763|gb|EIS86239.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-66]
Length = 360
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|418676124|ref|ZP_13237410.1| DNA mismatch repair protein MutL [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686142|ref|ZP_13247311.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418739149|ref|ZP_13295537.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|421091077|ref|ZP_15551860.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. 200802841]
gi|400323889|gb|EJO71737.1| DNA mismatch repair protein MutL [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000181|gb|EKO50852.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. 200802841]
gi|410739096|gb|EKQ83825.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410753401|gb|EKR10366.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 593
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDACATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 RWCT------------------YLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ + L + + ++L+ RD+ Q +
Sbjct: 123 KIGSIAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPARENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ I K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKIGSIAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPARENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|420694814|ref|ZP_15177680.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-53]
gi|391577508|gb|EIS23920.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-53]
Length = 360
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|225165694|ref|ZP_03727494.1| DNA mismatch repair protein MutL [Diplosphaera colitermitum TAV2]
gi|224800058|gb|EEG18487.1| DNA mismatch repair protein MutL [Diplosphaera colitermitum TAV2]
Length = 349
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 37/315 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+++L + V N+IAAGEVI+RPA +KEL+ENSLDA +T I+V GG L++I+DNG G
Sbjct: 4 VRRLTDRVANQIAAGEVIERPAAVIKELMENSLDAGATRIEVEFAHGGRSLMRIEDNGHG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ ++D + ER TSK+ + +DLNS+ +FGFRGEAL SI+ V+ T+ T+ S
Sbjct: 64 MLRDDAVLAIERHATSKINEADDLNSLGSFGFRGEALPSIASVSKFTLQTRPAGSDSGTE 123
Query: 127 WCTYLADLMAL--------ALMEMSQYLQ----RDKEQIGDKEEKQW-----------YR 163
L+ + +E++Q R K D E +
Sbjct: 124 VHINGGKLVHVRDCGRAVGTRIEVAQLFNSVPARRKFLKTDATESAHIISCVRLYALAFP 183
Query: 164 TVEHTLVPLMKSQYQPSE--KIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNV 221
+V TL+ ++ ++ E +V+R + L + L+ ++ DD +L+ G I
Sbjct: 184 SVSFTLIEDGRTIFRSPECPALVDRVAEIFGGQLAS-TLIPIDAHDDGMELR--GLIARP 240
Query: 222 NFS-TKKMTFLLFINN-PIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
+ + F+N P+ +IE Y +PKG +P +L + +DP VDVNV
Sbjct: 241 GPGRATRHEMITFVNQRPVDNRTLTYALIES-YHDMMPKGRYPAAFLFIDIDPAQVDVNV 299
Query: 274 HPTKHEVHFLHEDTI 288
HP K EV F E +
Sbjct: 300 HPAKREVRFRSEPQV 314
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER +++++ + S +T I+V GG L++I+DNG G+ ++D + E
Sbjct: 20 VIERPAAVIKELMENS-----LDAGATRIEVEFAHGGRSLMRIEDNGHGMLRDDAVLAIE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DLNS+ +FGFRGEAL SI+ V+ T+ T+ S KL
Sbjct: 75 RHATSKINEADDLNSLGSFGFRGEALPSIASVSKFTLQTRPAGSDSGTEVHINGGKLVH- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ C GT+I LF ++P RRK LK + E I V YA+ P V FTL +
Sbjct: 134 VRDCGRAVGTRIEVAQLFNSVPARRKFLKTDATESAHIISCVRLYALAFPSVSFTLIEDG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ R+ + + + I+G ++
Sbjct: 194 RTI--FRSPECPALVDRVAEIFGGQLA 218
>gi|420566267|ref|ZP_15062071.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-05]
gi|391449403|gb|EIR09131.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-05]
Length = 340
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420625338|ref|ZP_15115181.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-16]
gi|420798118|ref|ZP_15268213.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-92]
gi|391512584|gb|EIR65886.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-16]
gi|391688191|gb|EIT21429.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-92]
Length = 371
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|307246895|ref|ZP_07528960.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255877|ref|ZP_07537678.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260330|ref|ZP_07542037.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306852180|gb|EFM84420.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861145|gb|EFM93138.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865581|gb|EFM97462.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 622
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 4 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 64 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 122 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 175
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 176 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 235
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 236 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 295
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 296 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 336
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 42 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 102 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 161
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 162 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 203
>gi|52425571|ref|YP_088708.1| DNA mismatch repair protein [Mannheimia succiniciproducens MBEL55E]
gi|81825511|sp|Q65SD7.1|MUTL_MANSM RecName: Full=DNA mismatch repair protein MutL
gi|52307623|gb|AAU38123.1| MutL protein [Mannheimia succiniciproducens MBEL55E]
Length = 631
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 162/324 (50%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ IQ+ ++ GG L++I+DNG G
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIQIDIENGGATLIRIRDNGLG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEDLSLALARHATSKISCLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQKEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------RDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTEKTEFAHIDEV 174
Query: 184 VERACL----LEIASLNNLELL-----------------SVEGTD---DAFQ-------L 212
V R L + +N ++L ++ G D +A Q L
Sbjct: 175 VRRIALAKPQIAFTLTHNGKILRQYKSAVEIEQKLKRVSAICGEDFVQNALQIDWKHDNL 234
Query: 213 KVTGWITNVNF-------STKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ NF S + + + I I Q Y YL +P L L +D
Sbjct: 235 HLSGWVAVPNFHRPQNDLSYSYVNGRMIRDKVINHAIRQAYGDYLTNEQYPAFVLYLDLD 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P VDVNVHPTKHEV F H+ +I
Sbjct: 295 PNEVDVNVHPTKHEVRF-HQARLI 317
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ IQ+ ++ GG L++I+DNG GI KED+ + R TSK++ +DL +I + GFRGEA
Sbjct: 39 ASRIQIDIENGGATLIRIRDNGLGIAKEDLSLALARHATSKISCLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ ++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQKEAWQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E+ I +VV R A+ P + FTL
Sbjct: 159 KFLRTEKTEFAHIDEVVRRIALAKPQIAFTL 189
>gi|420722546|ref|ZP_15201530.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-59]
gi|391608092|gb|EIS50619.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-59]
Length = 336
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|303250340|ref|ZP_07336539.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650810|gb|EFL80967.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 622
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 4 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 63
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 64 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 122 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 175
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 176 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 235
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 236 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 295
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 296 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 336
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 42 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 102 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 161
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 162 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 203
>gi|420856966|ref|ZP_15320902.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-113]
gi|391737349|gb|EIT65245.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-113]
Length = 362
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420550129|ref|ZP_15047760.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-02]
gi|420561227|ref|ZP_15057524.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-04]
gi|420577237|ref|ZP_15072012.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-07]
gi|420587721|ref|ZP_15081522.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-09]
gi|420620292|ref|ZP_15110607.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-15]
gi|420673111|ref|ZP_15158306.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-46]
gi|420743993|ref|ZP_15220765.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-64]
gi|420761037|ref|ZP_15235083.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-71]
gi|420766210|ref|ZP_15239766.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-72]
gi|420808645|ref|ZP_15277717.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-94]
gi|420830472|ref|ZP_15297357.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-99]
gi|420840421|ref|ZP_15306346.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-101]
gi|391433706|gb|EIQ94999.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-02]
gi|391448634|gb|EIR08429.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-04]
gi|391464704|gb|EIR22963.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-07]
gi|391468327|gb|EIR26211.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-09]
gi|391497710|gb|EIR52542.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-15]
gi|391561351|gb|EIS09892.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-46]
gi|391629582|gb|EIS69490.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-64]
gi|391642955|gb|EIS81171.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-71]
gi|391645749|gb|EIS83595.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-72]
gi|391689468|gb|EIT22594.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-94]
gi|391715423|gb|EIT45977.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-99]
gi|391720926|gb|EIT50914.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-101]
Length = 359
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420646386|ref|ZP_15134232.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-32]
gi|391532300|gb|EIR83710.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-32]
Length = 364
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420733280|ref|ZP_15211131.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-61]
gi|391620229|gb|EIS61405.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-61]
Length = 338
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|420657478|ref|ZP_15144206.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-36]
gi|420667805|ref|ZP_15153480.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-45]
gi|420683845|ref|ZP_15168016.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-48]
gi|391545173|gb|EIR95295.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-36]
gi|391547696|gb|EIR97570.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-45]
gi|391564630|gb|EIS12821.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-48]
Length = 360
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|339627923|ref|YP_004719566.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus TPY]
gi|379007556|ref|YP_005257007.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus DSM
10332]
gi|339285712|gb|AEJ39823.1| putative DNA mismatch repair protein MutL [Sulfobacillus
acidophilus TPY]
gi|361053818|gb|AEW05335.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus DSM
10332]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 157/327 (48%), Gaps = 58/327 (17%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LD V N+IAAGEV++RPA+ +KELLENS DA + +V + +GGL + ++D+G
Sbjct: 3 RIHRLDPVVANQIAAGEVVERPASIVKELLENSFDANAGQCRVVLDEGGLARISVKDDGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G+ ED+ + ER TTSKLT+ +DL GFRGEALA+I+ V+HLT+ ++ + Y
Sbjct: 63 GMGPEDLMLATERHTTSKLTRLDDLGHSPWLGFRGEALAAIASVSHLTLASRESGAAVGY 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVE 185
+ LA MS+ Q + ++ D T+ K+ P+ ++
Sbjct: 123 ALTVEFGRIGDLAPRAMSEGTQVEVTRLFD------------TVPARQKALKSPAAELA- 169
Query: 186 RAC------------------------LLEIASLNN--LELLSVEGTDDAFQ-------- 211
AC LLE + ++++ G D A Q
Sbjct: 170 -ACQQVVQQLALCRPDVGITLWHHDRRLLETGGTGDRLAAIMAIFGRDLAEQVIAIDHTF 228
Query: 212 ---LKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLS 261
L++ G++ + + L++N ++ IE+ + LP +P+ +L
Sbjct: 229 SRGLRIQGYVAPAHVHRANRAGQGLYLNRRWITNWTLRSAIEEAFKPELPDRRYPYFWLW 288
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTI 288
L +DP VD N HPTK EV L E +
Sbjct: 289 LTLDPDTVDPNAHPTKAEVRLLGERQV 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S F + +V + +GGL + ++D+G G+ ED+ + E
Sbjct: 20 VVERPASIVKELLENS-----FDANAGQCRVVLDEGGLARISVKDDGIGMGPEDLMLATE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSKLT+ +DL GFRGEALA+I+ V+HLT+ ++ + Y + ++ D
Sbjct: 75 RHTTSKLTRLDDLGHSPWLGFRGEALAAIASVSHLTLASRESGAAVGYALTVEFGRIGD- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A ++GTQ+ LF +P R+KALK P+ E VV + A+ P VG TL +
Sbjct: 134 LAPRAMSEGTQVEVTRLFDTVPARQKALKSPAAELAACQQVVQQLALCRPDVGITLWHHD 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
L + T I I+G +++ +V
Sbjct: 194 RRL--LETGGTGDRLAAIMAIFGRDLAEQV 221
>gi|422656130|ref|ZP_16718577.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|331014608|gb|EGH94664.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans
str. M302278]
Length = 647
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ +
Sbjct: 142 QVETEGRD--------MDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S + + I + V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENS-----LDSGARRIDIDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMDAR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|425074063|ref|ZP_18477168.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
gi|404594474|gb|EKA95056.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
Length = 669
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 36/317 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLDA +T+I + + +GG KL++I+DNG G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++
Sbjct: 63 ISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------K 159
D M +A+ + ++L+ +K + G +E
Sbjct: 123 AYAEGRD-MTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALS 181
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
++ ++ T QY+ +++ + L N+ +++ T + L + GW+
Sbjct: 182 RFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWVE 241
Query: 220 N----VNFSTKKMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ V S + ++ + + I I Q Y YL P L L +DP VDVN
Sbjct: 242 HPLAPVQSSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDVN 301
Query: 273 VHPTKHEVHFLHEDTII 289
VHP KHEV F HE ++
Sbjct: 302 VHPAKHEVRF-HESRLV 317
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T+I + + +GG KL++I+DNG GI ++D+ +
Sbjct: 19 VVERPASVVKELLENS-----LDAGATTIDIDIDKGGAKLIRIRDNGCGISRDDLKLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++A +
Sbjct: 74 RHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQAYAEGRDMTVA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A G+ + DLFYN P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 VKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVSINLTHNG 193
Query: 468 ENLADIRTNVNS-SHSEVIGNIYGNNI 493
+ + R + H + I GN+
Sbjct: 194 KRVRQYRAAKETHQHHRRLSAICGNHF 220
>gi|307253647|ref|ZP_07535514.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306858883|gb|EFM90929.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 661
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 43 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 102
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 103 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 160
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 161 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 214
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 215 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 274
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 275 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 334
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 335 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 375
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 81 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 140
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 141 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 200
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 201 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 242
>gi|190151315|ref|YP_001969840.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307264668|ref|ZP_07546248.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916446|gb|ACE62698.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306869980|gb|EFN01744.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 661
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG +L++I+DNG
Sbjct: 43 PLIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNG 102
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D+ + R TSK++ EDL I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 103 CGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQ--A 160
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSE 181
W Y EM +Q +G E ++ T + K+++ +
Sbjct: 161 EAWQAYAQG------REMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHID 214
Query: 182 KIVERACLLE-------------IASLNNLELLSVEGT---------DDAFQ-------- 211
++V R L + + ++ SVE DD Q
Sbjct: 215 EVVRRIALAKPNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQ 274
Query: 212 ---LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVY-SIYLPKGSFPFVYL 260
L + GWI N S + ++N + R I Q Y + +P+G++P +
Sbjct: 275 HGDLHLHGWIGLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVV 334
Query: 261 SLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLE 297
L +DP VDVNVHP KHEV F L D I++ VQ+ L+
Sbjct: 335 FLDIDPSQVDVNVHPAKHEVRFHQGRLVHDFILQGVQTALQ 375
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ IQ+ +++GG +L++I+DNG GI K+D+ + R TSK++ EDL I + GFRGEA
Sbjct: 81 ANQIQIDIEKGGAQLIRIRDNGCGIGKQDLALALARHATSKISSLEDLEMILSLGFRGEA 140
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++ A++A +++ I+P + GT I +LF+N P RR
Sbjct: 141 LASISSVSRLTLTSRPAGQAEAWQAYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARR 200
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR 474
K L+ E+ I +VV R A+ P++GFTL + + R
Sbjct: 201 KFLRTDKTEFTHIDEVVRRIALAKPNIGFTLTHNGKTVRQYR 242
>gi|125625245|ref|YP_001033728.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855633|ref|YP_006357877.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166232095|sp|A2RP08.1|MUTL_LACLM RecName: Full=DNA mismatch repair protein MutL
gi|124494053|emb|CAL99053.1| DNA mismatch repair protein mutL [Lactococcus lactis subsp.
cremoris MG1363]
gi|300072055|gb|ADJ61455.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 656
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 168/326 (51%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI----------- 114
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGT 122
Query: 115 --ITKTKT----SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
I K T P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLIAKGGTIETLEPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ + G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFEL--TGYVSLP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DPK DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++TL
Sbjct: 301 PTKQEVRLSKERELMTLISKAIDETL 326
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSNAQEEAGTKLIAKGGTI-ETLEPLAKRLGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R + +
Sbjct: 217 TAKKMREINGS 227
>gi|313201103|ref|YP_004039761.1| DNA mismatch repair protein mutl [Methylovorus sp. MP688]
gi|312440419|gb|ADQ84525.1| DNA mismatch repair protein MutL [Methylovorus sp. MP688]
Length = 624
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 167/326 (51%), Gaps = 36/326 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + ++++IAAGEV++RPA+ALKELLENSLDA S+ I VT+ QGG+KLL++ D+G G
Sbjct: 4 IKLLPDQLISQIAAGEVVERPASALKELLENSLDAGSSDIAVTLGQGGVKLLRVTDDGNG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +D+ + R TSK+ +DL S+++ GFRGEALASI+ ++ +I ++ + A+R
Sbjct: 64 IPHDDLTLALTRHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWR 123
Query: 127 WCT---YLADLMALALMEMS---------------QYLQRDKEQIGDKEEKQWYRTVEHT 168
L D AL + ++L+ ++ + G EE +R + +
Sbjct: 124 IAADGGLLGDAAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEA--FRRIALS 181
Query: 169 LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ-------LKVTGWITNV 221
P + Q + + + R E A E+L + + +AF+ L++ G
Sbjct: 182 R-PDVGFMLQHNGRALMRLAPGE-AKRRFTEVLGPDFSAEAFELDESAGGLRLWGMAAKP 239
Query: 222 NFS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
FS + + T +++N I I Q Y L P L L +DP VDVNVH
Sbjct: 240 TFSRSARDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFALFLELDPTLVDVNVH 299
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
P+K EV F + + L K L
Sbjct: 300 PSKTEVRFREGQAVHRFIFHALHKAL 325
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S L++ L S S+ I VT+ QGG+KLL++ D+G GI +D+ +
Sbjct: 20 VVERPASALKELLENS-----LDAGSSDIAVTLGQGGVKLLRVTDDGNGIPHDDLTLALT 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL S+++ GFRGEALASI+ ++ +I ++ + A+R + D L
Sbjct: 75 RHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWRIA-ADGGLLGD 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
P A ++GT + +D+++N P RRK LK E+ + R A+ P VGF L+
Sbjct: 134 AAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEAFRRIALSRPDVGFMLQHNG 193
Query: 468 ENL 470
L
Sbjct: 194 RAL 196
>gi|384124793|ref|YP_005507407.1| DNA mismatch repair protein [Yersinia pestis D182038]
gi|262364457|gb|ACY61014.1| DNA mismatch repair protein [Yersinia pestis D182038]
Length = 361
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|28872058|ref|NP_794677.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato
str. DC3000]
gi|37999555|sp|Q87VJ2.1|MUTL_PSESM RecName: Full=DNA mismatch repair protein MutL
gi|28855311|gb|AAO58372.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 645
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ +
Sbjct: 142 QVETEGRD--------MDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I + V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDIDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMDAR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|422646544|ref|ZP_16709677.1| DNA mismatch repair protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330960091|gb|EGH60351.1| DNA mismatch repair protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 647
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELL+NSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLKNSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 142 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTAKARRISAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLKNSLDS-----GARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|420593034|ref|ZP_15086302.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-10]
gi|391481830|gb|EIR38327.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-10]
Length = 356
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 59/341 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
+DP VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 292 DIDPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQT 332
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|197287175|ref|YP_002153047.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
gi|238690089|sp|B4F203.1|MUTL_PROMH RecName: Full=DNA mismatch repair protein MutL
gi|194684662|emb|CAR46598.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
Length = 669
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 36/317 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLDA +T+I + + +GG KL++I+DNG G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++
Sbjct: 63 ISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------K 159
D M +A+ + ++L+ +K + G +E
Sbjct: 123 AYAEGRD-MTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALS 181
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
++ ++ T QY+ +++ + L N+ +++ T + L + GW+
Sbjct: 182 RFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWVE 241
Query: 220 N----VNFSTKKMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ V S + ++ + + I I Q Y YL P L L +DP VDVN
Sbjct: 242 HPLAPVQGSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDVN 301
Query: 273 VHPTKHEVHFLHEDTII 289
VHP KHEV F HE ++
Sbjct: 302 VHPAKHEVRF-HESRLV 317
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T+I + + +GG KL++I+DNG GI ++D+ +
Sbjct: 19 VVERPASVVKELLENS-----LDAGATTIDIDIDKGGAKLIRIRDNGCGISRDDLKLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++A +
Sbjct: 74 RHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQAYAEGRDMTVA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A G+ + DLFYN P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 VKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVSINLTHNG 193
Query: 468 ENLADIRTNVNS-SHSEVIGNIYGNNI 493
+ + R + H + I GN+
Sbjct: 194 KRVRQYRAAKETHQHHRRLSAICGNHF 220
>gi|47568272|ref|ZP_00238975.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
gi|47555100|gb|EAL13448.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
Length = 647
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 173/333 (51%), Gaps = 46/333 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
VNVHP K EV F E +++ ++E+TL G+
Sbjct: 296 VNVHPAKLEVRFSKEQELLK----LIEETLQGA 324
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229086317|ref|ZP_04218495.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
gi|228697012|gb|EEL49819.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
Length = 645
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 171/330 (51%), Gaps = 46/330 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LVIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ + G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEA--ESLDFTIRGY 235
Query: 218 ITNVNFSTKKMTFLLFI-------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E +++ ++EKTL
Sbjct: 296 VNVHPAKLEVRFSKEQELLQ----LIEKTL 321
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLVIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|429210438|ref|ZP_19201605.1| DNA mismatch repair protein [Pseudomonas sp. M1]
gi|428159212|gb|EKX05758.1| DNA mismatch repair protein [Pseudomonas sp. M1]
Length = 632
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 49/323 (15%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I+ L + N+IAAGEV++RPA+ +KELLEN LDA + I V V+QGG+KLL++
Sbjct: 1 MNDSRRIQLLSPRLANQIAAGEVVERPASVIKELLENCLDAGARRIDVEVEQGGIKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+D+G GI +D+ + R TSK+ + EDL ++ + GFRGEALASIS V+ LT+ ++T
Sbjct: 61 RDDGGGIPADDLPLALARHATSKIRELEDLEAVMSLGFRGEALASISSVSRLTMTSRTAD 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQY 177
+ A++ T D M +Q +G E + ++ T + K+++
Sbjct: 121 AEQAWQVETEGRD--------MQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEF 172
Query: 178 QPSEKIVERACL--LEIA---SLNNLELLSV-EGTDD-------------AF-------- 210
+++++R L ++A N + S+ E D+ AF
Sbjct: 173 DHLQEVIKRLALARFDVAFHLRHNGKTIFSLHEAADETARARRVGAVCGPAFLEQALPIE 232
Query: 211 ----QLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVY 259
L + GW+ FS + F N + + Q Y L G P
Sbjct: 233 IERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFV 292
Query: 260 LSLCMDPKNVDVNVHPTKHEVHF 282
L L +DP VDVNVHPTKHEV F
Sbjct: 293 LFLEVDPATVDVNVHPTKHEVRF 315
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 114/204 (55%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVIKELL-----ENCLDAGARRIDVEVEQGGIKLLRVRDDGGGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL ++ + GFRGEALASIS V+ LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLEAVMSLGFRGEALASISSVSRLTMTSRTADAEQAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + + + ++ + +G + G
Sbjct: 198 KTIFSLHEAADETARARRVGAVCG 221
>gi|423483359|ref|ZP_17460049.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
gi|401140910|gb|EJQ48465.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
Length = 647
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 171/330 (51%), Gaps = 46/330 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFI-------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNYTLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E +++ ++EKTL
Sbjct: 296 VNVHPAKLEVRFSKEQELLQ----LIEKTL 321
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|227357130|ref|ZP_03841499.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
gi|227162662|gb|EEI47629.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
Length = 669
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 36/317 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLDA +T+I + + +GG KL++I+DNG G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++
Sbjct: 63 ISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------K 159
D M +A+ + ++L+ +K + G +E
Sbjct: 123 AYAEGRD-MTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALS 181
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
++ ++ T QY+ +++ + L N+ +++ T + L + GW+
Sbjct: 182 RFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWVE 241
Query: 220 N----VNFSTKKMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ V S + ++ + + I I Q Y YL P L L +DP VDVN
Sbjct: 242 HPLAPVQSSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDVN 301
Query: 273 VHPTKHEVHFLHEDTII 289
VHP KHEV F HE ++
Sbjct: 302 VHPAKHEVRF-HESRLV 317
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T+I + + +GG KL++I+DNG GI ++D+ +
Sbjct: 19 VVERPASVVKELLENS-----LDAGATTIDIDIDKGGAKLIRIRDNGCGISRDDLKLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ LT+ ++T + A++A +
Sbjct: 74 RHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEAWQAYAEGRDMTVA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A G+ + DLFYN P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 VKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVSINLTHNG 193
Query: 468 ENLADIRTNVNS-SHSEVIGNIYGNNI 493
+ + R + H + I GN+
Sbjct: 194 KRVRQYRAAKETHQHHRRLSAICGNHF 220
>gi|213967922|ref|ZP_03396068.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato
T1]
gi|301384442|ref|ZP_07232860.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato Max13]
gi|302064109|ref|ZP_07255650.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato K40]
gi|302132270|ref|ZP_07258260.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213927265|gb|EEB60814.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato
T1]
Length = 645
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I + V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M +Q +G E + ++ T + K+++ +
Sbjct: 142 QVETEGRD--------MDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHE 193
Query: 183 IVERACL--LEIA---SLNNLELLSV-EGTDDAFQ------------------------- 211
+++R L ++A N +LS+ E DD +
Sbjct: 194 VIKRMALARFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNG 253
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I + V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDS-----GARRIDIDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMDAR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENL 470
+ +
Sbjct: 214 KTV 216
>gi|259046524|ref|ZP_05736925.1| DNA mismatch repair protein HexB [Granulicatella adiacens ATCC
49175]
gi|259036689|gb|EEW37944.1| DNA mismatch repair protein HexB [Granulicatella adiacens ATCC
49175]
Length = 636
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 168/328 (51%), Gaps = 36/328 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK+L + N+IAAGEVI+RP++ +KELLEN++DA ST I++ +++ GL+ ++IQDNG+G
Sbjct: 4 IKELSPLLTNQIAAGEVIERPSSVVKELLENAIDAGSTRIEIEIEESGLRKIRIQDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
+ KED + +R TTSKL E L I T GFRGEALASI+ V+ +T+ T T
Sbjct: 64 MTKEDARMSIKRHTTSKLYSPEQLFRIRTLGFRGEALASITAVSKVTLTTSTGEDSGVEL 123
Query: 119 ----------KTSPCAYRWCTYLADLM--ALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
KT P + DL A ++ + LQ + I D K E
Sbjct: 124 KIESGEIKEEKTVPPLKGTTFLVEDLFYNTPARLKFVRTLQTELAHITDVVSKASLSHPE 183
Query: 167 HTLVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLSVEGTDDAFQLKVTGWITNV 221
+ +K+ + + LL+ I +N ++L G D+ F KV+G+ +
Sbjct: 184 IAFI--LKNDGNLLLQTSGKGELLQAVAGNIGPVNARKMLPFSGEDEDF--KVSGYTSLP 239
Query: 222 NFSTKKMTFL-LFINN-PIKRM-----IEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+ +L +FIN PI+ M I Y L G FP +S+ MD + VDVNVH
Sbjct: 240 ELTRSNRNYLSIFINGRPIRNMAIAKAITLGYGSTLMVGRFPITIISIEMDVQLVDVNVH 299
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLG 302
PTK EV E + +Q + + + G
Sbjct: 300 PTKQEVRISKEQELSLVIQKAIREAIQG 327
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 11/219 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L ST I++ +++ GL+ ++IQDNG+G+ KED + +
Sbjct: 20 VIERPSSVVKELL-----ENAIDAGSTRIEIEIEESGLRKIRIQDNGSGMTKEDARMSIK 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-KTSPCAYRASYIDSKLKD 406
R TTSKL E L I T GFRGEALASI+ V+ +T+ T T + S + + K +
Sbjct: 75 RHTTSKLYSPEQLFRIRTLGFRGEALASITAVSKVTLTTSTGEDSGVELKIESGEIKEEK 134
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+ P +GT + EDLFYN P R K ++ E I DVVS+ ++ +P + F LK
Sbjct: 135 TVPPL---KGTTFLVEDLFYNTPARLKFVRTLQTELAHITDVVSKASLSHPEIAFILKND 191
Query: 467 NENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
NL + V GNI N +R++ FS +
Sbjct: 192 G-NLLLQTSGKGELLQAVAGNIGPVN-ARKMLPFSGEDE 228
>gi|167635859|ref|ZP_02394168.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170687873|ref|ZP_02879087.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|254683523|ref|ZP_05147383.1| DNA mismatch repair protein [Bacillus anthracis str. CNEVA-9066]
gi|254722044|ref|ZP_05183833.1| DNA mismatch repair protein [Bacillus anthracis str. A1055]
gi|254739666|ref|ZP_05197360.1| DNA mismatch repair protein [Bacillus anthracis str. Kruger B]
gi|421639523|ref|ZP_16080114.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
gi|167528816|gb|EDR91574.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170668189|gb|EDT18938.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|403393188|gb|EJY90433.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
Length = 627
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|30263774|ref|NP_846151.1| DNA mismatch repair protein [Bacillus anthracis str. Ames]
gi|47529193|ref|YP_020542.1| DNA mismatch repair protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186618|ref|YP_029870.1| DNA mismatch repair protein [Bacillus anthracis str. Sterne]
gi|65321094|ref|ZP_00394053.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Bacillus
anthracis str. A2012]
gi|165872424|ref|ZP_02217059.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167639830|ref|ZP_02398099.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170706899|ref|ZP_02897357.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|177652043|ref|ZP_02934589.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190568430|ref|ZP_03021337.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813324|ref|YP_002813333.1| DNA mismatch repair protein [Bacillus anthracis str. CDC 684]
gi|229604532|ref|YP_002868010.1| DNA mismatch repair protein [Bacillus anthracis str. A0248]
gi|254735808|ref|ZP_05193514.1| DNA mismatch repair protein [Bacillus anthracis str. Western North
America USA6153]
gi|254751062|ref|ZP_05203101.1| DNA mismatch repair protein [Bacillus anthracis str. Vollum]
gi|254759380|ref|ZP_05211405.1| DNA mismatch repair protein [Bacillus anthracis str. Australia 94]
gi|386737591|ref|YP_006210772.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
gi|81837840|sp|Q81WR4.1|MUTL_BACAN RecName: Full=DNA mismatch repair protein MutL
gi|254766156|sp|C3P5H4.1|MUTL_BACAA RecName: Full=DNA mismatch repair protein MutL
gi|254766157|sp|C3L823.1|MUTL_BACAC RecName: Full=DNA mismatch repair protein MutL
gi|30258418|gb|AAP27637.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Ames]
gi|47504341|gb|AAT33017.1| DNA mismatch repair protein MutL [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180545|gb|AAT55921.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Sterne]
gi|164711862|gb|EDR17404.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167512231|gb|EDR87608.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170128317|gb|EDS97186.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|172082412|gb|EDT67477.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190560434|gb|EDV14412.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007230|gb|ACP16973.1| DNA mismatch repair protein MutL [Bacillus anthracis str. CDC 684]
gi|229268940|gb|ACQ50577.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0248]
gi|384387443|gb|AFH85104.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
Length = 626
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|221502098|gb|EEE27844.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1314
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I++LD +VV IAAGEV+ RP++ALKELLEN+LDA+S+SI V+V GG KLL + D+G
Sbjct: 239 PQIRRLDPSVVQLIAAGEVVLRPSSALKELLENALDARSSSISVSVHNGGFKLLAVSDDG 298
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +D+ I+C+RFTTSKL DL ++TFGFRGEALAS++ V + + T+ + P
Sbjct: 299 CGIHPQDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHG 358
Query: 125 YRWCTY 130
YR C+Y
Sbjct: 359 YR-CSY 363
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 117/221 (52%), Gaps = 29/221 (13%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V + ++ R S L++ L + +R S+SI V+V GG KLL + D+G GI
Sbjct: 249 VQLIAAGEVVLRPSSALKELLENALDAR-----SSSISVSVHNGGFKLLAVSDDGCGIHP 303
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
+D+ I+C+RFTTSKL DL ++TFGFRGEALAS++ V + + T+ + P YR SY
Sbjct: 304 QDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHGYRCSY 363
Query: 400 IDSK----------------------LKDP--IKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
+ L+ P + A ++GT + LF+ P RRK L
Sbjct: 364 DKGEPILSSDSASSSASASSASSSSTLQVPAGVSVAARSRGTTLRVSRLFHAFPERRKML 423
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN 476
P EEY K DV RYA+ NPH+ FT ++Q++ D T+
Sbjct: 424 ASPQEEYAKCLDVCMRYAIDNPHIKFTCRRQDKTQTDFSTS 464
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 211 QLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
Q+ V G+ + ++ K TF+LFIN +++ +E VY LP+G +VYLSL
Sbjct: 677 QVSVWGYASRISAGVKPPGTFILFINGRLVDAPALRKSVEGVYQELLPRGLKAWVYLSLT 736
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ P +DVNVHPTK V L+ED + + + L +S++F Q+
Sbjct: 737 LPPWLIDVNVHPTKQRVQLLYEDFVAANLAKHFRERLGSQASSQIFNVQT 786
>gi|149175950|ref|ZP_01854567.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
gi|148845104|gb|EDL59450.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
Length = 648
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 163/310 (52%), Gaps = 37/310 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LD +V+N+IAAGEVI+RPA+A+KELL+NS+DA +T I+V + GG L+++ DNG
Sbjct: 12 RIHQLDTSVINKIAAGEVIERPASAVKELLDNSIDALATRIEVDIMNGGADLIRVVDNGE 71
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI +D+ + TSK++ +DL S+ T GFRGEALASIS V+H I T+T
Sbjct: 72 GIHPDDLLLAVASNATSKISTADDLFSVQTMGFRGEALASISEVSHFRIRTRTADQSQGL 131
Query: 119 ----------KTSPCAYRWCTYLADLMALALMEM-SQYLQRDKEQIGDKEEKQWYRTVEH 167
K PC T + A + ++L+ K + G E+ + H
Sbjct: 132 EFEVKTGIPGKPQPCGCPLGTAIEVRQLFANTPVRRKFLKTTKTEFGHISEQFTRAALAH 191
Query: 168 TLVPLMKSQ-------YQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN 220
+ ++ PS+ +++R L + L +L+ V+ D +++ G++++
Sbjct: 192 PRLYMVLRHNNKVIFDLPPSDNLLDRLRLFYGSKLAE-QLIWVDSEVD--DIRIWGYVSH 248
Query: 221 V--NFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N ST+K + LF+N ++ + + Y L G P +L L M VDVN
Sbjct: 249 PSENKSTRKGQY-LFLNGRWIQDRTLQHALTEAYRGLLMVGRQPISFLYLDMPASQVDVN 307
Query: 273 VHPTKHEVHF 282
VHPTK EV F
Sbjct: 308 VHPTKSEVRF 317
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 14/195 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S + K LL ++ + +T I+V + GG L+++ DNG GI +D+ +
Sbjct: 29 VIERPASAV-KELLDNSIDAL----ATRIEVDIMNGGADLIRVVDNGEGIHPDDLLLAVA 83
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK++ +DL S+ T GFRGEALASIS V+H I T+T A ++ ++ ++K
Sbjct: 84 SNATSKISTADDLFSVQTMGFRGEALASISEVSHFRIRTRT-----ADQSQGLEFEVKTG 138
Query: 408 I----KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
I +PC GT I LF N P RRK LK E+ I++ +R A+ +P + L
Sbjct: 139 IPGKPQPCGCPLGTAIEVRQLFANTPVRRKFLKTTKTEFGHISEQFTRAALAHPRLYMVL 198
Query: 464 KKQNENLADIRTNVN 478
+ N+ + D+ + N
Sbjct: 199 RHNNKVIFDLPPSDN 213
>gi|237838861|ref|XP_002368728.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966392|gb|EEB01588.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1219
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I++LD +VV IAAGEV+ RP++ALKELLEN+LDA+S+SI V+V GG KLL + D+G
Sbjct: 134 PQIRRLDPSVVQLIAAGEVVLRPSSALKELLENALDARSSSISVSVHNGGFKLLAVSDDG 193
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +D+ I+C+RFTTSKL DL ++TFGFRGEALAS++ V + + T+ + P
Sbjct: 194 CGIHPQDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHG 253
Query: 125 YRWCTY 130
YR C+Y
Sbjct: 254 YR-CSY 258
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V + ++ R S L++ L + +R S+SI V+V GG KLL + D+G GI
Sbjct: 144 VQLIAAGEVVLRPSSALKELLENALDAR-----SSSISVSVHNGGFKLLAVSDDGCGIHP 198
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
+D+ I+C+RFTTSKL DL ++TFGFRGEALAS++ V + + T+ + P YR SY
Sbjct: 199 QDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHGYRCSY 258
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 211 QLKVTGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
Q+ V G+ + ++ K TF+LFIN +++ IE VY LP+G +VYLSL
Sbjct: 586 QVSVWGYASRISAGVKPPGTFILFINGRLVDAPTLRKSIEGVYQELLPRGLKAWVYLSLT 645
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ P +DVNVHPTK V L+ED + + + L +S++F Q+
Sbjct: 646 LPPWLIDVNVHPTKQRVQLLYEDFVAANLAKHFRERLGSQASSQIFNVQT 695
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 412 AGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLA 471
A ++GT + LF+ P RRK L P EEY K DV RYA+ NPH+ FT ++Q++
Sbjct: 333 ARSRGTTLRVSRLFHAFPERRKMLASPQEEYAKCLDVCMRYAIDNPHIKFTCRRQDKTQT 392
Query: 472 DIRTN 476
D T+
Sbjct: 393 DFSTS 397
>gi|220927109|ref|YP_002502411.1| DNA mismatch repair protein MutL [Methylobacterium nodulans ORS
2060]
gi|219951716|gb|ACL62108.1| DNA mismatch repair protein MutL [Methylobacterium nodulans ORS
2060]
Length = 621
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 43/315 (13%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P +++LD +V+RIAAGEV++RPA A+KEL+EN++DA +TSI+VT++ GG +L+++ D+G
Sbjct: 9 PAVRRLDPVLVDRIAAGEVVERPAAAVKELVENAIDAGATSIEVTIQAGGRRLIRVLDDG 68
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS--- 121
G+ ED+ + ER TSKL + DL+ I T GFRGEAL SI VA L+++++T +
Sbjct: 69 IGMGPEDLALAVERHATSKLPEG-DLDRIDTLGFRGEALPSIGAVARLSLVSRTAEAESG 127
Query: 122 --------------PCAYRWCTY--LADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
P A T + DL A + ++L+ D+ + G E V
Sbjct: 128 HGLVVDAGIKGPVRPVAAERGTRVEVTDLFAATPARL-KFLKSDRAEAGAVAEILRRLAV 186
Query: 166 EHTLVPL-MKSQYQ-----PSEK-----IVERACLLEIASLNNLELLSVEGTDDAFQLKV 214
H + ++ + P+E + A +L N +S+E + F L
Sbjct: 187 AHPQIRFTLRGEGGAGLTFPAETGQGSWLRRLAAVLGADFAANSVPVSLE--REGFALD- 243
Query: 215 TGWITNVNFSTKKMTFLLFINN--PIK-----RMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
G I F T + F+ N P++ + Y+ + P + L+L DP
Sbjct: 244 -GHIGLPTFHRAAATHMHFVVNGRPVRDRLLLGAVRGAYADVMASDRHPVLALALTCDPT 302
Query: 268 NVDVNVHPTKHEVHF 282
VDVNVHP K EV F
Sbjct: 303 EVDVNVHPAKTEVRF 317
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+VT++ GG +L+++ D+G G+ ED+ + ER TSKL + DL+ I T GFRGEA
Sbjct: 47 ATSIEVTIQAGGRRLIRVLDDGIGMGPEDLALAVERHATSKLPEG-DLDRIDTLGFRGEA 105
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI VA L+++++T + + +D+ +K P++P A +GT++ DLF P R
Sbjct: 106 LPSIGAVARLSLVSRTAEAESGH-GLVVDAGIKGPVRPVAAERGTRVEVTDLFAATPARL 164
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
K LK E +A+++ R AV +P + FTL+ +
Sbjct: 165 KFLKSDRAEAGAVAEILRRLAVAHPQIRFTLRGEG 199
>gi|258545148|ref|ZP_05705382.1| DNA mismatch repair protein MutL, partial [Cardiobacterium hominis
ATCC 15826]
gi|258519619|gb|EEV88478.1| DNA mismatch repair protein MutL [Cardiobacterium hominis ATCC
15826]
Length = 310
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 30/306 (9%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I++L +++N+IAAGEVI+RPA+ +KE++EN++DA +T I + ++ GG KL++++DNG
Sbjct: 2 PRIQQLPNSLINQIAAGEVIERPASVVKEIIENAIDAGATQIDIDIEDGGGKLIRVRDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +D+ + TSK+ +DL I+T GFRGEAL SI+ V+ T+ ++ + A
Sbjct: 62 CGIHPDDLALAFATHATSKIRNLDDLEHITTLGFRGEALPSIASVSKTTLTSRAEGESSA 121
Query: 125 YRWCTYLADLMALALMEMSQYLQ----------RDKEQIGDKEEKQWYR------TVEHT 168
+R +L D ++ A ++ R K ++ E+Q + + H
Sbjct: 122 WRISPHLGDAISPAAHPPGTTIEIRDLFYNTPARKKFLKSERTERQHIQQLVQNLALSHD 181
Query: 169 LVPL-MKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDD--AFQLKVTGWI---TNVN 222
+ + + + +P IAS+ +LL D A + + GW+ T+
Sbjct: 182 GITIRLNNHGKPLGVYGGEGLAARIASVLGDDLLEQALPIDARAADMHLYGWVGLPTSAT 241
Query: 223 FSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPT 276
++ F +IN I R I Q Y L G P L L + P+++DVN HP
Sbjct: 242 NQPERQYF--YINGRIIRDKIIAHAIRQAYQDMLYHGRHPVYVLYLDIAPEHIDVNAHPA 299
Query: 277 KHEVHF 282
KHEV F
Sbjct: 300 KHEVRF 305
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + +T I + ++ GG KL++++DNG GI +D+ +
Sbjct: 20 VIERPASVVKEII-----ENAIDAGATQIDIDIEDGGGKLIRVRDNGCGIHPDDLALAFA 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ +DL I+T GFRGEAL SI+ V+ T+ ++ + A+R I L D
Sbjct: 75 THATSKIRNLDDLEHITTLGFRGEALPSIASVSKTTLTSRAEGESSAWR---ISPHLGDA 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I P A GT I DLFYN P R+K LK E I +V A+ H G T++ N
Sbjct: 132 ISPAAHPPGTTIEIRDLFYNTPARKKFLKSERTERQHIQQLVQNLAL--SHDGITIRLNN 189
Query: 468 EN 469
Sbjct: 190 HG 191
>gi|333984267|ref|YP_004513477.1| DNA mismatch repair protein mutL [Methylomonas methanica MC09]
gi|333808308|gb|AEG00978.1| DNA mismatch repair protein mutL [Methylomonas methanica MC09]
Length = 629
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L ++N+IAAGEV++RPA+ +KEL+EN DA +T + V V+QGG+K ++I+DNG
Sbjct: 2 RIHALPTQLINQIAAGEVVERPASVVKELVENCFDAGATQVYVDVEQGGVKQIKIRDNGC 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL + + GFRGEAL SIS VA LT+I++T + CA+
Sbjct: 62 GIDKDDLALALSRHATSKIASLDDLEHVVSMGFRGEALPSISSVARLTLISRTAVADCAW 121
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ ++ E + Q D G E + +Y T + K+++ E
Sbjct: 122 Q--------VSADGSETNLDPQPDPHPPGTTVEVRDLFYNTPARRKFLKAEKTEFGHIEN 173
Query: 183 IVERACL--LEIASL---NNLELLSVEGT-------------------DDAFQ------- 211
++++ L ++ L N E+L+++ D+A +
Sbjct: 174 LIQKLALSRFDVGFLLQHNQREVLNLKPAATETDQEKRIAAICGSAFVDNAVRIDYAASG 233
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F N + ++Q Y L G P L L +
Sbjct: 234 LHLQGWVGLPTFSRSQQDMQFFYVNGRLIKDRLVAHAVKQAYQDVLYHGRHPVFVLYLTL 293
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVN HPTK EV F
Sbjct: 294 DPALVDVNAHPTKLEVRF 311
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + F +T + V V+QGG+K ++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELV-----ENCFDAGATQVYVDVEQGGVKQIKIRDNGCGIDKDDLALALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL + + GFRGEAL SIS VA LT+I++T + CA++ S S+
Sbjct: 74 RHATSKIASLDDLEHVVSMGFRGEALPSISSVARLTLISRTAVADCAWQVSADGSETNLD 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+P GT + DLFYN P RRK LK E+ I +++ + A+ VGF L+
Sbjct: 134 PQPDPHPPGTTVEVRDLFYNTPARRKFLKAEKTEFGHIENLIQKLALSRFDVGFLLQHNQ 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIYGNNISR 495
+ +++ + E + G+ + +N R
Sbjct: 194 REVLNLKPAATETDQEKRIAAICGSAFVDNAVR 226
>gi|385338276|ref|YP_005892149.1| DNA mismatch repair protein MutL [Neisseria meningitidis WUE 2594]
gi|433475861|ref|ZP_20433198.1| DNA mismatch repair protein mutL [Neisseria meningitidis 88050]
gi|433515143|ref|ZP_20471916.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2004090]
gi|433518604|ref|ZP_20475339.1| DNA mismatch repair protein mutL [Neisseria meningitidis 96023]
gi|433528511|ref|ZP_20485120.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3652]
gi|433530719|ref|ZP_20487303.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3642]
gi|433532981|ref|ZP_20489543.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2007056]
gi|433534776|ref|ZP_20491314.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2001212]
gi|319410690|emb|CBY91069.1| DNA mismatch repair protein MutL [Neisseria meningitidis WUE 2594]
gi|432208970|gb|ELK64941.1| DNA mismatch repair protein mutL [Neisseria meningitidis 88050]
gi|432251124|gb|ELL06496.1| DNA mismatch repair protein mutL [Neisseria meningitidis 96023]
gi|432254939|gb|ELL10272.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2004090]
gi|432265312|gb|ELL20508.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3652]
gi|432265529|gb|ELL20721.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3642]
gi|432266337|gb|ELL21523.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2007056]
gi|432271045|gb|ELL26175.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2001212]
Length = 658
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 82/351 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + +L+ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIELLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIELLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|262275157|ref|ZP_06052968.1| DNA mismatch repair protein MutL [Grimontia hollisae CIP 101886]
gi|262221720|gb|EEY73034.1| DNA mismatch repair protein MutL [Grimontia hollisae CIP 101886]
Length = 653
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 160/315 (50%), Gaps = 45/315 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENS+DA +T I + +++GG KL++I+DNG+G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIEKGGSKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++++ R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T T A
Sbjct: 63 IAKEELELALSRHATSKITCLDDLEAIISLGFRGEALASISSVSRLTLTSRTVTQSEA-- 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEE--KQWYR 163
W Y MA+ + + ++L+ DK + G +E K+
Sbjct: 121 WSAYAEGRDMAVKVKPAAHPVGTTVEVVDLFFNTPARRKFLRTDKTEFGHIDELLKRIAL 180
Query: 164 TVEHTLVPLMKS-----QYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
+ + L + QY+ + V+R L +VE + + L + GWI
Sbjct: 181 SRFDVAITLRHNGAIVRQYRAATNDVQREKRLAAVCGPQFVKTAVEVSLEHQGLTLQGWI 240
Query: 219 TNVN-----------FSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
F K+M IN+ I+ Q Y L F L + +DP
Sbjct: 241 CTPEGARAQNDIQHCFVNKRMMKDKLINHAIR----QGYEASLRPDQFAAYVLYIDIDPH 296
Query: 268 NVDVNVHPTKHEVHF 282
VDVNVHP KHEV F
Sbjct: 297 QVDVNVHPAKHEVRF 311
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 98/171 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + +++GG KL++I+DNG+GI KE++++ R TSK+T +DL +I + GFRGEA
Sbjct: 39 ATRIDIDIEKGGSKLIRIRDNGSGIAKEELELALSRHATSKITCLDDLEAIISLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T T A+ A + +KP A GT + DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTVTQSEAWSAYAEGRDMAVKVKPAAHPVGTTVEVVDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE 483
K L+ E+ I +++ R A+ V TL+ + R N E
Sbjct: 159 KFLRTDKTEFGHIDELLKRIALSRFDVAITLRHNGAIVRQYRAATNDVQRE 209
>gi|442804337|ref|YP_007372486.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740187|gb|AGC67876.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 656
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 87/357 (24%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
K+ LDE N+IAAGEVI+RPA+ +KE++EN++DA +TSI V + GG+K ++I DNG
Sbjct: 3 KVVILDENTANQIAAGEVIERPASVVKEMVENAIDAHATSITVEITNGGVKSIKIVDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ ER TSK+ +DL +ST GFRGEALASI+ V+ + +ITKT+
Sbjct: 63 GIEGDDVELAFERHATSKIRSIDDLTRLSTMGFRGEALASIAAVSKVEVITKTEDAKTGT 122
Query: 120 ------------------------------TSPCAYRW-------CTYLADL---MALAL 139
+P Y++ TY+ D+ +ALA
Sbjct: 123 RVIVEGGKVVLSEPTGAPKGTTFIVRELFYNTPARYKFLKKDTTEATYIHDVISKIALAR 182
Query: 140 MEMS-QYLQRDKEQIGDKEEKQWYRTVEHTLVP----LMKSQYQPSEKIVERACLLEIAS 194
++S +++ + K TV HT P L+ + Y K RA + +
Sbjct: 183 PDISIKFVNQGK-------------TVIHT--PGNHDLLSTVYSLFGKDTARAVIPVNLT 227
Query: 195 LNNLELLSVEGTDDAFQLKVTGWITNVNFSTK----KMTFL---LFINNPIKRMIEQVYS 247
N +KV+G++ S +M F+ + N I IE+ Y
Sbjct: 228 FNG--------------VKVSGFVGKPEISRGNRNLEMVFVNGRVVYNRTIITAIEEAYK 273
Query: 248 IYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
L + FPF L + + P+ VDVNVHP K EV F E+ + V + L G++
Sbjct: 274 TRLMQKRFPFTVLKVDVPPETVDVNVHPAKLEVRFSDENMVYRTVYMAVSDALSGAS 330
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + +TSI V + GG+K ++I DNG GI +D+++ E
Sbjct: 20 VIERPASVVKEMV-----ENAIDAHATSITVEITNGGVKSIKIVDNGDGIEGDDVELAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +ST GFRGEALASI+ V+ + +ITKT+ + R K+
Sbjct: 75 RHATSKIRSIDDLTRLSTMGFRGEALASIAAVSKVEVITKTEDAKTGTRVIVEGGKVVLS 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+P +GT I +LFYN P R K LK+ + E I DV+S+ A+ P + Q
Sbjct: 135 -EPTGAPKGTTFIVRELFYNTPARYKFLKKDTTEATYIHDVISKIALARPDISIKFVNQG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ + I T N + +++G + +R V
Sbjct: 194 KTV--IHTPGNHDLLSTVYSLFGKDTARAV 221
>gi|390444465|ref|ZP_10232242.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
gi|389664472|gb|EIM75964.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
Length = 601
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 34/327 (10%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + + N+IAAGEV+QRPA+ALKELLEN++DA +T IQV +K+ G +L+Q+ DNG G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELLENAVDAGATHIQVLIKEAGKQLIQVIDNGKG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ D + ER TSK+ EDL +I TFGFRGEALASI+ VA + + TK R
Sbjct: 65 MSGTDARMSFERHATSKIRASEDLFAIKTFGFRGEALASIAAVAQVEMKTKRAADELGTR 124
Query: 127 WC-----------TYLADLMALALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEHT 168
L D A+A+ + +L+ + ++ E+ + H
Sbjct: 125 LLIEGSEVKEQKPAALPDGTAIAVKNLFFNVPARRNFLKSNAVEMRHLVEEFQRVALAHP 184
Query: 169 LVPLMKSQ-----YQ-PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVN 222
+ + Q YQ P+ + +R L + +L++ + +++ L ++G++
Sbjct: 185 EIKMSLHQQDMELYQLPASSLQQRIVAL-MGKQYRSQLIAAQ--EESPFLTISGFVGKPE 241
Query: 223 FSTK-KMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
+ K K LF+N+ R + Y + PF L L +DPK++D+NVHP
Sbjct: 242 LARKTKGEQYLFVNHRYIRSPYLHHAVCTAYEGLIASDLHPFYVLFLEIDPKHIDINVHP 301
Query: 276 TKHEVHFLHEDTIIERVQSMLEKTLLG 302
TK E+ F E TI V++ L + L G
Sbjct: 302 TKTEIKFDDERTIYGVVKTALRQALGG 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQV +K+ G +L+Q+ DNG G+ D + ER TSK+ EDL +I TFGFRGEA
Sbjct: 41 ATHIQVLIKEAGKQLIQVIDNGKGMSGTDARMSFERHATSKIRASEDLFAIKTFGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ VA + + TK R S++K+ KP A GT I ++LF+N+P RR
Sbjct: 101 LASIAAVAQVEMKTKRAADELGTRLLIEGSEVKEQ-KPAALPDGTAIAVKNLFFNVPARR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
LK + E + + R A+ +P + +L +Q+ L
Sbjct: 160 NFLKSNAVEMRHLVEEFQRVALAHPEIKMSLHQQDMEL 197
>gi|229012952|ref|ZP_04170117.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|423661392|ref|ZP_17636561.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
gi|228748206|gb|EEL98066.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|401301433|gb|EJS07022.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
Length = 647
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|429729020|ref|ZP_19263708.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
gi|429146169|gb|EKX89229.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
Length = 627
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 174/330 (52%), Gaps = 35/330 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI LD++ +N+IAAGEV++RP++ +KEL+ENS+DA S+ I + ++ GG L++I DNG+
Sbjct: 3 KINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKGLIRIIDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D++ R TSK+ EDL+S+ + GFRGEALASI+ V+ L ++TKT+ +
Sbjct: 63 GIDKDDVNKAFLRHATSKINTVEDLSSLESLGFRGEALASIAAVSKLEMLTKTEEALIGL 122
Query: 126 RWC---TYLADLMALALMEMSQYLQRD---------KEQIGDKEEKQWYRTVEHTLV--- 170
R + + A + +Q RD K ++ E Q + + +
Sbjct: 123 RIVLDGGKIREKEATSANRGTQISVRDLFFNTPARRKFLKSNQAEAQAITDIVNKIAIGN 182
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQL----------KVTGWITN 220
P +K +Y + K + L + + +N + + + G D + L ++G++ N
Sbjct: 183 PSIKIKYINNSKTI-YETLGDGSIINAIRM--IYGRDISENLIEIDYRSKYFSISGYLGN 239
Query: 221 VN-FSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
N + + L+IN I + I Y +P +P ++++ +DP VDVN+
Sbjct: 240 NNIYRGNRNHQHLYINGRYIKSPNISKKINDAYKAIIPINKYPIYFVNISVDPAKVDVNI 299
Query: 274 HPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
HP+K EV F E+ I+ + + LL S
Sbjct: 300 HPSKLEVKFDQEEEILNELSDFVRGILLKS 329
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S+ I + ++ GG L++I DNG+GI K+D++
Sbjct: 20 VVERPSSIIKELVENS-----IDAGSSYISIEIENGGKGLIRIIDNGSGIDKDDVNKAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL+S+ + GFRGEALASI+ V+ L ++TKT+ + R K+++
Sbjct: 75 RHATSKINTVEDLSSLESLGFRGEALASIAAVSKLEMLTKTEEALIGLRIVLDGGKIREK 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ + N+GTQI DLF+N P RRK LK E I D+V++ A+ NP + +K N
Sbjct: 135 -EATSANRGTQISVRDLFFNTPARRKFLKSNQAEAQAITDIVNKIAIGNPSI--KIKYIN 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ T + S I IYG +IS +
Sbjct: 192 NSKTIYETLGDGSIINAIRMIYGRDISENL 221
>gi|260913834|ref|ZP_05920308.1| DNA mismatch repair protein MutL [Pasteurella dagmatis ATCC 43325]
gi|260631921|gb|EEX50098.1| DNA mismatch repair protein MutL [Pasteurella dagmatis ATCC 43325]
Length = 640
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 164/320 (51%), Gaps = 42/320 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ ++QGG L++I+DNG G
Sbjct: 3 IRVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIEQGGSGLIRIRDNGVG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K ++ + R TSK++ +DL+ I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKTELSLALARHATSKISCLDDLDCILSLGFRGEALASISSVSRLTLTSRTTDQNEAWQ 122
Query: 127 WCTYLADL-------------------MALALMEMSQYLQRDKEQIGDKEEK-------- 159
D+ + ++L+ DK + +E
Sbjct: 123 VYAQGRDMDTTIVPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIALAK 182
Query: 160 ---QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
Q+ T + KS ++K+ + + + N L +E D L ++G
Sbjct: 183 SHIQFILTHNGKTIRHYKSAVNDTQKLKRISAICGEDFVQN--ALQIEWRHD--DLHLSG 238
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ +FS T+ +IN + R I Q YS +L +P L L ++P +V
Sbjct: 239 WVALPHFSRTQNDLNYCYINGRMVRDKVINHAIRQAYSEHLHNDQYPAFVLFLDLNPNDV 298
Query: 270 DVNVHPTKHEVHFLHEDTII 289
DVNVHPTKHEV F H+ +I
Sbjct: 299 DVNVHPTKHEVRF-HQQRLI 317
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ ++QGG L++I+DNG GI K ++ + R TSK++ +DL+ I + GFRGEA
Sbjct: 39 ATRIQIDIEQGGSGLIRIRDNGVGIPKTELSLALARHATSKISCLDDLDCILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ + I P + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTTDQNEAWQVYAQGRDMDTTIVPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
K L+ E+ I +V+ R A+ H+ F L + + ++ VN +
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKSHIQFILTHNGKTIRHYKSAVNDT 206
>gi|455790242|gb|EMF42128.1| MutL C-terminal dimerization domain protein [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 593
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNG
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGA 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 R------------------WCTYLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ L + + ++L+ RD+ Q +
Sbjct: 123 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPTRENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNG GI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGAGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ + K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKTRSVAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + T N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPTRENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|423488891|ref|ZP_17465573.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
gi|423494616|ref|ZP_17471260.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|423498593|ref|ZP_17475210.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|401151677|gb|EJQ59123.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|401159251|gb|EJQ66636.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|402433246|gb|EJV65300.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
Length = 647
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229061371|ref|ZP_04198717.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
gi|228717910|gb|EEL69556.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
Length = 647
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIRQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D I+ A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIRQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|226723041|sp|B8CIX3.1|MUTL_SHEPW RecName: Full=DNA mismatch repair protein MutL
gi|212555145|gb|ACJ27599.1| DNA mismatch repair protein [Shewanella piezotolerans WP3]
Length = 620
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 175/349 (50%), Gaps = 69/349 (19%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + + +GG KL++I+DNG G
Sbjct: 3 IEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIRIRDNGFG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T+T A++
Sbjct: 63 IPKQDLSLALSRHATSKLKSLDDLEAIMSFGFRGEALASISSVSRLTLTSRTETQAEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWY---- 162
MA+ ++ + ++L+ DK + +E W
Sbjct: 123 -AKAEGTEMAVQILPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRIA 179
Query: 163 ---RTVEHTLVPLMKS--QYQPS--------------EKIVERACLLEIASLNNLEL--- 200
R + TL KS Y+P+ K CL S N+L L
Sbjct: 180 LVRRDIHFTLKHNGKSVRNYRPAMTEIQYLQRLGQVCGKAFAETCLHISCSHNDLTLSGY 239
Query: 201 LSVEGTDDAFQLKVTGWI-TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVY 259
L G +G+ T + ++ +N+ ++ Q +S Y G P
Sbjct: 240 LQAPGA-------ASGYCETQYFYVNGRLVKDRLVNHAVR----QAFSEYA-AGVSPGYV 287
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQS-MLEKTLLG 302
L L +DP VDVNVHP KHEV F H+ D I++ +QS M + + LG
Sbjct: 288 LMLELDPHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSAMAQSSELG 335
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + + +GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIDKGGSKLIRIRDNGFGIPKQDLSLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T+T A++A +++
Sbjct: 74 RHATSKLKSLDDLEAIMSFGFRGEALASISSVSRLTLTSRTETQAEAWQAKAEGTEMAVQ 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I P A GT I A DLF+N P RR+ LK E+ I + + R A+ + FTLK
Sbjct: 134 ILPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRRDIHFTLKHNG 193
Query: 468 ENLADIR 474
+++ + R
Sbjct: 194 KSVRNYR 200
>gi|423401405|ref|ZP_17378578.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|423477890|ref|ZP_17454605.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
gi|401654395|gb|EJS71938.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|402428815|gb|EJV60907.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
Length = 647
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|421130492|ref|ZP_15590686.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. 2008720114]
gi|410358191|gb|EKP05372.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. 2008720114]
Length = 593
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDACATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESCTKEQKTAW 122
Query: 126 RWCT------------------YLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ + L + + ++L+ RD+ Q +
Sbjct: 123 KIGSIAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPARENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNGTGI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ I K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESCTKEQKTAWKIGSIAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPARENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|260890992|ref|ZP_05902255.1| DNA mismatch repair protein MutL [Leptotrichia hofstadii F0254]
gi|260859019|gb|EEX73519.1| DNA mismatch repair protein MutL [Leptotrichia hofstadii F0254]
Length = 691
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 39/320 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE V N IAAGEV++ PA+ +KE++ENSLDAK+T I++ V + G + ++ DNG G
Sbjct: 4 IKILDEKVSNIIAAGEVVENPASMIKEMIENSLDAKATMIKIEVFKSGTDV-KVSDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+D + ER TSK+ + ED+ +++T+GFRGEAL+SI+ V+ LTI T+++ SP Y+
Sbjct: 63 MDKDDTLLSVERHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYK 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEKI 183
Y + E+S+ +G + E + +Y T + + ++Y I
Sbjct: 123 IGCYGG--VVRKFEEVSR-------NVGTEMEVRDLFYNTPARRKFLRKISTEYGKIRDI 173
Query: 184 VERACLLEIASLNNLEL-------LSVEGTDDA----FQLKVT--------GWITNVNFS 224
V + L +LEL S +G D+ F V G++ NV
Sbjct: 174 VLKEALSNSNVAFSLELDGKTTIKTSGKGIDNTILELFGKSVLRNLKKFEYGYLGNVEIL 233
Query: 225 TKKMTFLL-FINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
F+ F+NN I+R + Y L KG +PF + DPK +DVNVHP+K
Sbjct: 234 RSSKDFMFTFVNNRYVKSATIERAVIDGYYTKLMKGKYPFAIIFYNTDPKEIDVNVHPSK 293
Query: 278 HEVHFLHEDTIIERVQSMLE 297
+ F ++ + ++S ++
Sbjct: 294 KIIKFSNDKIVYNEIKSAID 313
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 127/216 (58%), Gaps = 16/216 (7%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++E SM+++ + S ++T I++ V + G + ++ DNG G+ K+D + E
Sbjct: 20 VVENPASMIKEMIENS-----LDAKATMIKIEVFKSGTDV-KVSDNGIGMDKDDTLLSVE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + ED+ +++T+GFRGEAL+SI+ V+ LTI T+++ SP Y+ ++
Sbjct: 74 RHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYKIGCYGGVVR-K 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ + N GT++ DLFYN P RRK L++ S EY KI D+V + A+ N +V F+L+
Sbjct: 133 FEEVSRNVGTEMEVRDLFYNTPARRKFLRKISTEYGKIRDIVLKEALSNSNVAFSLE--- 189
Query: 468 ENLADIRTNVNSSHSEV---IGNIYGNNISRRVRRF 500
D +T + +S + I ++G ++ R +++F
Sbjct: 190 ---LDGKTTIKTSGKGIDNTILELFGKSVLRNLKKF 222
>gi|229134576|ref|ZP_04263386.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|423669344|ref|ZP_17644373.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|423674528|ref|ZP_17649467.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
gi|228648837|gb|EEL04862.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|401298471|gb|EJS04071.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|401310079|gb|EJS15412.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423395932|ref|ZP_17373133.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|423406807|ref|ZP_17383956.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
gi|401653674|gb|EJS71218.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|401660097|gb|EJS77580.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC
29176]
gi|197299183|gb|EDY33713.1| DNA mismatch repair domain protein [Ruminococcus lactaris ATCC
29176]
Length = 713
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 39/331 (11%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I LD+ +++IAAGEVI+RPA+ +KEL+EN++DA STS+ V +K GG+ ++I+DNG
Sbjct: 2 PHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVTVEIKDGGISFIRIRDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI KE++ R +TSK+ EDL+ I++ GFRGEAL+SI+ V +ITKTK S
Sbjct: 62 CGIPKEEVKSAFLRHSTSKIETVEDLSHIASLGFRGEALSSIAAVTRTEVITKTKDSDLG 121
Query: 125 YRWC------------------TYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
++ T+L + + ++L+ + G ++ + +
Sbjct: 122 TKYVIEGGKEVSLEETGAPDGTTFLVHQLFYNVPARRKFLKTPMTEAGHVQDLLMHLALS 181
Query: 167 HTLVPLM-----KSQYQPSEKIVERACLLEI----ASLNNLELLSVEGTDDAFQLKVTGW 217
H V L + + + S + + +I + N +EL +G L++TG+
Sbjct: 182 HPEVALQFLNNGQEKLRTSGNGKLKDVIYQIYGRDVAANLIELDYEKGG-----LRITGF 236
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ + F F N I + +E Y ++ + FPF L ++ + VD
Sbjct: 237 LGKPVITRGNRNFENFFVNGRYVKSGMISKALEDAYRDFVMQHKFPFAVLHFHLNGEEVD 296
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+NVHPTK E+ F + + V + +TLL
Sbjct: 297 INVHPTKMELRFQKQQEVYGTVFEAVHRTLL 327
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+ V +K GG+ ++I+DNG GI KE++ R +TSK+ EDL+ I++ GFRGEA
Sbjct: 40 STSVTVEIKDGGISFIRIRDNGCGIPKEEVKSAFLRHSTSKIETVEDLSHIASLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SI+ V +ITKTK S + I+ + ++ GT + LFYN+P RR
Sbjct: 100 LSSIAAVTRTEVITKTKDSDLGTK-YVIEGGKEVSLEETGAPDGTTFLVHQLFYNVPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK P E + D++ A+ +P V L+ N +RT+ N +VI IYG +
Sbjct: 159 KFLKTPMTEAGHVQDLLMHLALSHPEVA--LQFLNNGQEKLRTSGNGKLKDVIYQIYGRD 216
Query: 493 IS 494
++
Sbjct: 217 VA 218
>gi|196038472|ref|ZP_03105781.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228986912|ref|ZP_04147039.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229197879|ref|ZP_04324595.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|423574625|ref|ZP_17550744.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
gi|196030880|gb|EDX69478.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228585597|gb|EEK43699.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|228772861|gb|EEM21300.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|401212150|gb|EJR18896.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423598920|ref|ZP_17574920.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
gi|401237190|gb|EJR43647.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|402556109|ref|YP_006597380.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
gi|401797319|gb|AFQ11178.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|163941456|ref|YP_001646340.1| DNA mismatch repair protein [Bacillus weihenstephanensis KBAB4]
gi|423518405|ref|ZP_17494886.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
gi|229890121|sp|A9VS12.1|MUTL_BACWK RecName: Full=DNA mismatch repair protein MutL
gi|163863653|gb|ABY44712.1| DNA mismatch repair protein MutL [Bacillus weihenstephanensis
KBAB4]
gi|401161132|gb|EJQ68500.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
Length = 644
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|398868107|ref|ZP_10623527.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM78]
gi|398234360|gb|EJN20237.1| DNA mismatch repair protein MutL [Pseudomonas sp. GM78]
Length = 636
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 155/320 (48%), Gaps = 53/320 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+QGG+KLL+++D+G+
Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 69
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 70 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDAEQAW 129
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQ--WYRT-VEHTLVPLMKSQYQPSEK 182
+ T D M+ +Q +G E + ++ T + K+++ ++
Sbjct: 130 QVETEGRD--------MAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQE 181
Query: 183 IVERACLLE-------------IASLNNL--------------------ELLSVEGTDDA 209
++ R L I SL+ + L +E +
Sbjct: 182 VIRRLALARFDVAFHLRHNGKTILSLHEARDDAARARRVAAICGPGFLEQALPIEIERNG 241
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSL 262
L GW+ F+ + F N + + Q Y L G P L
Sbjct: 242 LHL--WGWVGLPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFF 299
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHPTKHEV F
Sbjct: 300 EVDPTGVDVNVHPTKHEVRF 319
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+QGG+KLL+++D+G+GI +D+ +
Sbjct: 27 VVERPASVIKELLENSLDS-----GAKRIDVDVEQGGVKLLRVRDDGSGISADDLPLALA 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 82 RHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPR 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 142 VQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIRRLALARFDVAFHLRHNG 201
Query: 468 ENL 470
+ +
Sbjct: 202 KTI 204
>gi|229157347|ref|ZP_04285425.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
gi|228626074|gb|EEK82823.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
Length = 647
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423558668|ref|ZP_17534970.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
gi|401191936|gb|EJQ98958.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 36/324 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P +
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 126 -----------------RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHT 168
+ + +Y++ ++G+ + + + H
Sbjct: 123 LIIKGGDIIRQEKTASRKGTNITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSHP 182
Query: 169 LVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGWITN 220
V L + +K++ R L I S+ +L+ +E F +K G++T
Sbjct: 183 EVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GYVTL 238
Query: 221 VNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
+ ++ I N + + I+Q Y LP G +P +LS+ MDP VDVNV
Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298
Query: 274 HPTKHEVHFLHEDTIIERVQSMLE 297
HP K EV F E +++ ++ L+
Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQ 322
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D I+ A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIRQEKTASRKGTNITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423374435|ref|ZP_17351773.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
gi|401094347|gb|EJQ02429.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229168508|ref|ZP_04296231.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|423592289|ref|ZP_17568320.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
gi|228614914|gb|EEK72016.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|401230531|gb|EJR37038.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
Length = 684
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 41/311 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD+ +N+IAAGEVI+RPA+ +KELLEN++DAKST++ V ++ GGL ++++ DNG G
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R
Sbjct: 64 IPKEEIPLAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSR 123
Query: 127 WCTYLADLMAL---ALMEMSQYLQRD-------------------------KEQIGDKEE 158
+ + +AL E + ++ R+ E+I
Sbjct: 124 YQIEGGEEIALEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHP 183
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
+ R +++ L S + I+ EIA+ L++V+ D +KV G+I
Sbjct: 184 EISIRLIQNGQSKLHTSGNHNLKDIIYTIFGREIAA----NLIAVQSGADP--VKVEGFI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N N+ + ++ I + IE Y ++ + +PF L ++P+ +DV
Sbjct: 238 GKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDV 297
Query: 272 NVHPTKHEVHF 282
NVHP K E+ F
Sbjct: 298 NVHPAKMELRF 308
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + ++ ST++ V ++ GGL ++++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELLENAVDAK-----STAVTVEIRDGGLSMIRVTDNGCGIPKEEIPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R I+ +
Sbjct: 75 RHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSRYQ-IEGGEEIA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IA +LFYN P RRK LK P E +AD+V + A+ +P + L +
Sbjct: 134 LEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHPEISIRLIQNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ + + T+ N + ++I I+G I+
Sbjct: 194 Q--SKLHTSGNHNLKDIIYTIFGREIA 218
>gi|222097214|ref|YP_002531271.1| DNA mismatch repair protein [Bacillus cereus Q1]
gi|254766159|sp|B9IV58.1|MUTL_BACCQ RecName: Full=DNA mismatch repair protein MutL
gi|221241272|gb|ACM13982.1| DNA mismatch repair protein MutL [Bacillus cereus Q1]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|384181578|ref|YP_005567340.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327662|gb|ADY22922.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|228922483|ref|ZP_04085785.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423581979|ref|ZP_17558090.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|423635459|ref|ZP_17611112.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
gi|228837197|gb|EEM82536.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401212858|gb|EJR19599.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|401278210|gb|EJR84146.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|228940846|ref|ZP_04103406.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973767|ref|ZP_04134344.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980322|ref|ZP_04140633.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|384187772|ref|YP_005573668.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676089|ref|YP_006928460.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452200150|ref|YP_007480231.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779427|gb|EEM27683.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|228785919|gb|EEM33921.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818860|gb|EEM64925.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941481|gb|AEA17377.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409175218|gb|AFV19523.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452105543|gb|AGG02483.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423511801|ref|ZP_17488332.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
gi|402450062|gb|EJV81896.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LSIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|334131725|ref|ZP_08505487.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
gi|333443198|gb|EGK71163.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
Length = 596
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 41/364 (11%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ L + ++++IAAGEV++RPA+ LKELLENSLDA S I+V ++ GG+K L++ D+G
Sbjct: 2 PAIRLLPDLLISQIAAGEVVERPASVLKELLENSLDAGSRDIRVQLEAGGVKRLRVADDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ +ED+ + R TSK+ +DL +++T GFRGEALASI+ VA ++I ++ S A
Sbjct: 62 CGMPREDLPLALARHATSKIASLDDLEAVATMGFRGEALASIASVARVSITSRETGSAHA 121
Query: 125 YR----WCTYLADLMALALMEMSQ-YLQRDKEQIGDKEEKQWYRTVEHTL------VPLM 173
+R A L A +++++ Y + + E+ Y + VP +
Sbjct: 122 WRIDNEGEVEPAALDAGTVVDVADLYYNTPARRKFLRTEQTEYGHCDDVFGRIALSVPQV 181
Query: 174 KSQYQPSEKIVERACLLEIAS----LNNLELL----SVEGTDDAFQLKVTGWITNVNFS- 224
Q + ++++R ++AS L E + VE DA Q++V+G+ FS
Sbjct: 182 AFQLMHNGRLMQRLPAGDMASRVRALLGDEFMQHARPVEA--DAGQIRVSGFAAQPAFSR 239
Query: 225 TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKH 278
+ F+N R + + Y+ L P + + +DP+ VDVNVHP K
Sbjct: 240 AGRDAQYCFVNGRFVRDRLLAHALREAYADVLHGARHPAYVVFIELDPRAVDVNVHPAKT 299
Query: 279 EVHFLHEDTIIERVQSMLEKTLL--------GSNTSRVFYTQSTSIQVTV-----KQGGL 325
EV F + + V +E+ L G++ S QSTS +Q G+
Sbjct: 300 EVRFRDSRGVHQFVFHAVERALAPSIVPAMQGASASAASELQSTSFAPPASAWVPRQQGM 359
Query: 326 KLLQ 329
L Q
Sbjct: 360 ALEQ 363
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 10/176 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L S S I+V ++ GG+K L++ D+G G+ +ED+ +
Sbjct: 20 VVERPASVLKELLENS-----LDAGSRDIRVQLEAGGVKRLRVADDGCGMPREDLPLALA 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +++T GFRGEALASI+ VA ++I ++ S A+R ID++ +
Sbjct: 75 RHATSKIASLDDLEAVATMGFRGEALASIASVARVSITSRETGSAHAWR---IDNEGE-- 129
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
++P A + GT + DL+YN P RRK L+ EY DV R A+ P V F L
Sbjct: 130 VEPAALDAGTVVDVADLYYNTPARRKFLRTEQTEYGHCDDVFGRIALSVPQVAFQL 185
>gi|229092806|ref|ZP_04223944.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
gi|228690604|gb|EEL44385.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|206977890|ref|ZP_03238778.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217961189|ref|YP_002339757.1| DNA mismatch repair protein [Bacillus cereus AH187]
gi|229140409|ref|ZP_04268964.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|375285690|ref|YP_005106129.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|423353470|ref|ZP_17331097.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|423567337|ref|ZP_17543584.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
gi|226723029|sp|B7HLA2.1|MUTL_BACC7 RecName: Full=DNA mismatch repair protein MutL
gi|206743890|gb|EDZ55309.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217067416|gb|ACJ81666.1| DNA mismatch repair protein MutL [Bacillus cereus AH187]
gi|228642970|gb|EEK99246.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|358354217|dbj|BAL19389.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|401089283|gb|EJP97454.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|401214425|gb|EJR21155.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
Length = 647
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|157373934|ref|YP_001472534.1| DNA mismatch repair protein [Shewanella sediminis HAW-EB3]
gi|189030416|sp|A8FRD3.1|MUTL_SHESH RecName: Full=DNA mismatch repair protein MutL
gi|157316308|gb|ABV35406.1| DNA mismatch repair protein MutL [Shewanella sediminis HAW-EB3]
Length = 624
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 176/337 (52%), Gaps = 54/337 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 ISKEDLGLALSRHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTADQVEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYRTVE 166
+D MA+ ++ + ++L+ DK + +E W + +
Sbjct: 123 AYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRIA 179
Query: 167 HTLVPLMKSQ----YQPSEKIVE--RACLLEIASLNNLELLS--------VEGTDDAFQL 212
L++S + + K+V RA + L L +S +E L
Sbjct: 180 -----LVRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDL 234
Query: 213 KVTGWITNVNFSTKKM-TFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
K+TG++ + F T T ++N + R + Q ++ + +V L L +D
Sbjct: 235 KLTGYVQSPFFETPASDTQYFYVNGRLVRDRLVNHAVRQAFAEHETGEQASYV-LMLELD 293
Query: 266 PKNVDVNVHPTKHEVHFLH----EDTIIERVQSMLEK 298
P VDVNVHP KHEV F D I + +QS L +
Sbjct: 294 PHQVDVNVHPAKHEVRFHQSRYVHDYIFQALQSALHQ 330
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I DNG+GI KED+ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIEKGGSKLIKIHDNGSGISKEDLGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++A S +
Sbjct: 74 RHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTADQVEAWQAYAEGSDMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ + A DLF+N P RR+ LK E+ I + + R A+ + FTLK
Sbjct: 134 VIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRSDIHFTLKHNG 193
Query: 468 ENLADIR-TNVNSSHSEVIGNIYGNNISRRV 497
+ + + R TN + + + I G + +
Sbjct: 194 KVVRNYRATNTQDQYLQRLAQISGKKFAEQA 224
>gi|229174433|ref|ZP_04301965.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
gi|228608993|gb|EEK66283.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|297588420|ref|ZP_06947063.1| DNA mismatch repair protein HexB [Finegoldia magna ATCC 53516]
gi|297573793|gb|EFH92514.1| DNA mismatch repair protein HexB [Finegoldia magna ATCC 53516]
Length = 627
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 179/341 (52%), Gaps = 40/341 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L E + +IAAGEVI+RP + +KEL+ENS+DA S +I V +K GG + + DNG+G
Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENSIDAGSDTIVVEIKNGGKDFISVSDNGSG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K ++++ +R +TSKL +F+DL I T GFRGEALASI V+ L++ T+TK+ +
Sbjct: 62 IEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLSVSTRTKSEKIGKK 121
Query: 127 WCTYLADLMALALMEMS------------------QYLQRDKEQIGDKEEKQWYRTVEHT 168
+ +++ + + M+ ++++ D+ + + + +T
Sbjct: 122 VEFRNSKVISESDVAMNVGTKIVIKDLFYNVPVRKKFMKTDQTEANLITTTMYKFAICNT 181
Query: 169 LVPLM-----KSQYQPSEKIVERACLLEI---ASLNNLELLSVEGTDDAFQLKVTGWITN 220
V + K+ ++ + R ++ + + NNL + + D K+ G+I+N
Sbjct: 182 DVSIKYIKDNKTLFETKKNSSIRENIINLFGTSMSNNLLDIDINSRD----YKIHGYISN 237
Query: 221 VNF--STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N + ++M + +F+N I+ +E Y +P G FP +L ++PK VDVN
Sbjct: 238 NNLYRANRQMQY-IFLNGRFVKSEDIRNTVESNYKSVIPNGRFPLFWLFFEINPKLVDVN 296
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VHP K +V D I+E + + + LL +N S +QS
Sbjct: 297 VHPNKQKVKISIIDEILEELNKKV-RFLLENNASIANISQS 336
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 16/226 (7%)
Query: 280 VHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQ 331
+ L EDTI IER S++++ + S S +I V +K GG + +
Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENS-----IDAGSDTIVVEIKNGGKDFISVS 56
Query: 332 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 391
DNG+GI K ++++ +R +TSKL +F+DL I T GFRGEALASI V+ L++ T+TK+
Sbjct: 57 DNGSGIEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLSVSTRTKSE 116
Query: 392 PCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSR 451
+ + +SK+ A N GT+I+ +DLFYN+P R+K +K E N I + +
Sbjct: 117 KIGKKVEFRNSKVISE-SDVAMNVGTKIVIKDLFYNVPVRKKFMKTDQTEANLITTTMYK 175
Query: 452 YAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+A+ N V K N+ L T NSS E I N++G ++S +
Sbjct: 176 FAICNTDVSIKYIKDNKTL--FETKKNSSIRENIINLFGTSMSNNL 219
>gi|422335933|ref|ZP_16416906.1| DNA mismatch repair protein mutL [Aggregatibacter aphrophilus
F0387]
gi|353346119|gb|EHB90404.1| DNA mismatch repair protein mutL [Aggregatibacter aphrophilus
F0387]
Length = 615
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 161/324 (49%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRVLSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQHEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHT 168
W Y +M +Q IG + EK + ++
Sbjct: 121 WQVYAQG------RDMETTIQPASHPIGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 169 LVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLSVEGTDDAFQ-----------L 212
+ + +++ S + +L + + L+ ++ +DD Q L
Sbjct: 175 IRRIALAKFNISFTLTHNGKVLRQYKSAVTNEQKLKRVAAICSDDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ +F+ + ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWVALPHFNRPQNDLNYCYVNGRMVRDKIITHAIRQAYAEYLSNDQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQSRLV 317
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 94/162 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ ++ I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQHEAWQVYAQGRDMETTIQPASHPIGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
+ E++ I +V+ R A+ ++ FTL + L ++ V
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFNISFTLTHNGKVLRQYKSAV 203
>gi|228954045|ref|ZP_04116074.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071265|ref|ZP_04204489.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|229081020|ref|ZP_04213533.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|423425906|ref|ZP_17402937.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|423437223|ref|ZP_17414204.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|423503553|ref|ZP_17480145.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449090712|ref|YP_007423153.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228702334|gb|EEL54807.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|228711886|gb|EEL63837.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|228805611|gb|EEM52201.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401110653|gb|EJQ18552.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|401120378|gb|EJQ28174.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|402458907|gb|EJV90647.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449024469|gb|AGE79632.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|52141721|ref|YP_085109.1| DNA mismatch repair protein [Bacillus cereus E33L]
gi|81686628|sp|Q636Q8.1|MUTL_BACCZ RecName: Full=DNA mismatch repair protein MutL
gi|51975190|gb|AAU16740.1| DNA mismatch repair protein, MutL family [Bacillus cereus E33L]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|253998998|ref|YP_003051061.1| DNA mismatch repair protein MutL [Methylovorus glucosetrophus
SIP3-4]
gi|253985677|gb|ACT50534.1| DNA mismatch repair protein MutL [Methylovorus glucosetrophus
SIP3-4]
Length = 624
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 166/326 (50%), Gaps = 36/326 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + ++++IAAGEV++RPA+ALKELLENSLDA S+ I VT+ QGG+KLL++ D+G G
Sbjct: 4 IKLLPDQLISQIAAGEVVERPASALKELLENSLDAGSSDIAVTLGQGGVKLLRVTDDGNG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I D+ + R TSK+ +DL S+++ GFRGEALASI+ ++ +I ++ + A+R
Sbjct: 64 IPHGDLTLALTRHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWR 123
Query: 127 WCT---YLADLMALALMEMS---------------QYLQRDKEQIGDKEEKQWYRTVEHT 168
L D AL + ++L+ ++ + G EE +R + +
Sbjct: 124 IAADGGLLGDAAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEA--FRRIALS 181
Query: 169 LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ-------LKVTGWITNV 221
P + Q + + + R E A E+L + + +AF+ L++ G
Sbjct: 182 R-PDVGFMLQHNGRALMRLAPGE-AKRRFTEVLGPDFSAEAFELDESAGGLRLWGMAAKP 239
Query: 222 NFS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
FS + + T +++N I I Q Y L P L L +DP VDVNVH
Sbjct: 240 TFSRSARDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFALFLELDPTLVDVNVH 299
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
P+K EV F + + L K L
Sbjct: 300 PSKTEVRFREGQAVHRFIFHALHKAL 325
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 6/183 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S L++ L S S+ I VT+ QGG+KLL++ D+G GI D+ +
Sbjct: 20 VVERPASALKELLENS-----LDAGSSDIAVTLGQGGVKLLRVTDDGNGIPHGDLTLALT 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL S+++ GFRGEALASI+ ++ +I ++ + A+R + D L
Sbjct: 75 RHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWRIA-ADGGLLGD 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
P A ++GT + +D+++N P RRK LK E+ + R A+ P VGF L+
Sbjct: 134 AAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEAFRRIALSRPDVGFMLQHNG 193
Query: 468 ENL 470
L
Sbjct: 194 RAL 196
>gi|238757517|ref|ZP_04618702.1| DNA mismatch repair protein mutL [Yersinia aldovae ATCC 35236]
gi|238704279|gb|EEP96811.1| DNA mismatch repair protein mutL [Yersinia aldovae ATCC 35236]
Length = 635
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 172/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 ISKADLSLALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTADQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEK-------- 159
D+ L ++++ ++++ +K + G +E
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 160 -QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
+ H LV ++ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLVRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + +++ +T + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVAD-PAASRTLTEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKADLSLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTADQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLVRQYRAAPDPSQHERRLASICG 217
>gi|229180045|ref|ZP_04307389.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
gi|228603254|gb|EEK60731.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|90408487|ref|ZP_01216646.1| DNA mismatch repair protein [Psychromonas sp. CNPT3]
gi|90310419|gb|EAS38545.1| DNA mismatch repair protein [Psychromonas sp. CNPT3]
Length = 600
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 173/332 (52%), Gaps = 43/332 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KELLENSLDA ++ I++ +++GG K ++++DNG G
Sbjct: 3 IQILAPRLANQIAAGEVVERPASVVKELLENSLDAGASRIEIDIEKGGAKCIRVKDNGQG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------- 119
+ K+++ + R TSK++ +DL +I + GFRGEALAS+S V+ LT +K +
Sbjct: 63 VAKDELTLALSRHATSKISHLDDLEAIMSLGFRGEALASVSSVSRLTFTSKPQDQEQAWQ 122
Query: 120 -----------TSPCAYRWCTYLADL-MALALMEMSQYLQRDKEQIGDKEE-----KQWY 162
PCA+ T + L + ++L+ +K + +E Y
Sbjct: 123 AIAEGRDMQVHIKPCAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRLALSY 182
Query: 163 RTVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
+ TL K QY+P+ ++ L +AS+ + L E D LK++G
Sbjct: 183 FDISFTLKHNGKIIRQYRPASTPTQQ--LKRLASICSDSFVKSALHFESADQG--LKISG 238
Query: 217 WITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
WI++ S + + + +IN I R I+Q Y+ LP G FP + + +
Sbjct: 239 WISD-RLSPRTLGDVQYCYINGRIIRDRLVNHAIKQAYARILPAGFFPGFVIYIDCPAEQ 297
Query: 269 VDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VDVNVHP+KHEV F + + + S L TL
Sbjct: 298 VDVNVHPSKHEVRFHQARWVHDFIVSTLSVTL 329
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 123/222 (55%), Gaps = 12/222 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ L L + SR I++ +++GG K ++++DNG G+ K+++ +
Sbjct: 19 VVERPASVVKELLENSLDAGASR--------IEIDIEKGGAKCIRVKDNGQGVAKDELTL 70
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK++ +DL +I + GFRGEALAS+S V+ LT +K + A++A +
Sbjct: 71 ALSRHATSKISHLDDLEAIMSLGFRGEALASVSSVSRLTFTSKPQDQEQAWQAIAEGRDM 130
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ IKPCA QGT + DLF+N P RR+ LK E+ I +++ R A+ + FTLK
Sbjct: 131 QVHIKPCAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRLALSYFDISFTLK 190
Query: 465 KQNENLADIR-TNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ + R + + + + +I ++ + F SA Q
Sbjct: 191 HNGKIIRQYRPASTPTQQLKRLASICSDSFVKSALHFESADQ 232
>gi|423418323|ref|ZP_17395412.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
gi|401106596|gb|EJQ14557.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229151969|ref|ZP_04280165.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
gi|228631524|gb|EEK88157.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRVRRFSSAS 504
+++++ + S
Sbjct: 214 IQVAKKLVPIEAES 227
>gi|229191893|ref|ZP_04318863.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
gi|228591444|gb|EEK49293.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229000592|ref|ZP_04160132.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
gi|229006014|ref|ZP_04163703.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228755213|gb|EEM04569.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228759147|gb|EEM08153.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
Length = 643
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 46/330 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L ++T T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIMQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ + G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEA--ESLDFTIRGY 235
Query: 218 ITNVNFSTKKMTFLLFI-------NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYISTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VNVHP K EV F E +++ ++EKTL
Sbjct: 296 VNVHPAKLEVRFSKEQELLQ----LIEKTL 321
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L ++T T +P +++ K D I + A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELVTSTGDAP----GTHLIIKGGDIIMQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423604603|ref|ZP_17580496.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
gi|401245223|gb|EJR51581.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423389971|ref|ZP_17367197.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
gi|401640887|gb|EJS58613.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|423522401|ref|ZP_17498874.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
gi|401175095|gb|EJQ82298.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIRQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D I+ A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIRQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|301055258|ref|YP_003793469.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|423550482|ref|ZP_17526809.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
gi|300377427|gb|ADK06331.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|401190098|gb|EJQ97148.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|30021860|ref|NP_833491.1| DNA mismatch repair protein [Bacillus cereus ATCC 14579]
gi|218231496|ref|YP_002368571.1| DNA mismatch repair protein [Bacillus cereus B4264]
gi|228959975|ref|ZP_04121640.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047451|ref|ZP_04193043.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|229111241|ref|ZP_04240795.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|229129045|ref|ZP_04258018.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|229146340|ref|ZP_04274711.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|296504267|ref|YP_003665967.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|423385273|ref|ZP_17362529.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|423412427|ref|ZP_17389547.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|423431788|ref|ZP_17408792.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|423528370|ref|ZP_17504815.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
gi|423585821|ref|ZP_17561908.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|423628849|ref|ZP_17604598.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|423641149|ref|ZP_17616767.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|423649633|ref|ZP_17625203.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|81837324|sp|Q81A26.1|MUTL_BACCR RecName: Full=DNA mismatch repair protein MutL
gi|226723028|sp|B7HDP3.1|MUTL_BACC4 RecName: Full=DNA mismatch repair protein MutL
gi|29897416|gb|AAP10692.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 14579]
gi|218159453|gb|ACK59445.1| DNA mismatch repair protein MutL [Bacillus cereus B4264]
gi|228636973|gb|EEK93432.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|228654282|gb|EEL10147.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|228672235|gb|EEL27525.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|228723895|gb|EEL75248.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|228799718|gb|EEM46670.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296325319|gb|ADH08247.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|401104495|gb|EJQ12472.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|401116544|gb|EJQ24382.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|401233167|gb|EJR39663.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|401268394|gb|EJR74442.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|401280210|gb|EJR86132.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|401282913|gb|EJR88810.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|401635329|gb|EJS53084.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|402452033|gb|EJV83852.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
Length = 647
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRVRRFSSAS 504
+++++ + S
Sbjct: 214 IQVAKKLVPIEAES 227
>gi|42782852|ref|NP_980099.1| DNA mismatch repair protein [Bacillus cereus ATCC 10987]
gi|81830999|sp|Q732V8.1|MUTL_BACC1 RecName: Full=DNA mismatch repair protein MutL
gi|42738779|gb|AAS42707.1| DNA mismatch repair protein MutL [Bacillus cereus ATCC 10987]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229186007|ref|ZP_04313177.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
gi|228597426|gb|EEK55076.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|49479185|ref|YP_037829.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|81828232|sp|Q6HF47.1|MUTL_BACHK RecName: Full=DNA mismatch repair protein MutL
gi|49330741|gb|AAT61387.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229104332|ref|ZP_04235001.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
gi|228679030|gb|EEL33238.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDVIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDVIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|206972646|ref|ZP_03233588.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
gi|206732459|gb|EDZ49639.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRVRRFSSAS 504
+++++ + S
Sbjct: 214 IQVAKKLVPIEAES 227
>gi|118478989|ref|YP_896140.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam]
gi|166231104|sp|A0RHE0.1|MUTL_BACAH RecName: Full=DNA mismatch repair protein MutL
gi|118418214|gb|ABK86633.1| DNA mismatch repair protein MutL [Bacillus thuringiensis str. Al
Hakam]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|196044440|ref|ZP_03111675.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225865749|ref|YP_002751127.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|376267661|ref|YP_005120373.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
gi|254766158|sp|C1ENZ2.1|MUTL_BACC3 RecName: Full=DNA mismatch repair protein MutL
gi|196024475|gb|EDX63147.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225787379|gb|ACO27596.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|364513461|gb|AEW56860.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|407706173|ref|YP_006829758.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bacillus
thuringiensis MC28]
gi|407383858|gb|AFU14359.1| DNA mismatch repair protein mutL [Bacillus thuringiensis MC28]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|228935065|ref|ZP_04097895.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824635|gb|EEM70437.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229031398|ref|ZP_04187399.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
gi|228729893|gb|EEL80872.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229018964|ref|ZP_04175806.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
gi|229025207|ref|ZP_04181631.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228736140|gb|EEL86711.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228742292|gb|EEL92450.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229123282|ref|ZP_04252486.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
gi|228660058|gb|EEL15694.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|196034149|ref|ZP_03101559.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228916406|ref|ZP_04079973.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228947489|ref|ZP_04109779.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195993223|gb|EDX57181.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228812009|gb|EEM58340.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228843209|gb|EEM88290.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|238795251|ref|ZP_04638834.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
gi|238725419|gb|EEQ16990.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
Length = 638
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 170/335 (50%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKEDLSLALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQA 332
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI KED+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIGKEDLSLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAAPDPSQHERRLASICG 217
>gi|423458049|ref|ZP_17434846.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
gi|401148433|gb|EJQ55926.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|229162703|ref|ZP_04290660.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
gi|228620585|gb|EEK77454.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
Length = 647
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|270308366|ref|YP_003330424.1| MutL/HexB family DNA mismatch repair protein [Dehalococcoides sp.
VS]
gi|270154258|gb|ACZ62096.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides sp.
VS]
Length = 566
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 48/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+T + RIAAGEVI+RP++ +KELLENSLDA + + V +++GG+ +++ D+G G
Sbjct: 3 IKLLDKTTIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++ + ER TSKL+ FED+ +IS+ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 IVFSEVLLAFERHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESG-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSE--KIV 184
TYL +L+ EM ++ + + + + + V L L Q + S+ ++V
Sbjct: 121 --TYL----SLSGGEMVKHTRMARSPGTTIKLTRLFSRVPARLKFLKTPQREASKVSEVV 174
Query: 185 ERACL--------LEIASLNNLE----------LLSVEGTD----------DAFQ---LK 213
L L I N L +L + G D D+++ +
Sbjct: 175 LSYALAYPEVKFTLSIDGRNTLNTPGNGKLRDAVLEIYGNDVASKMLDLETDSYRSSSIN 234
Query: 214 VTGWITNVNFS-TKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G ++ S + + + F+N +++ +EQ YS L G +P +++ +D
Sbjct: 235 ISGLVSPPEISRSNRNSLHFFVNRRLIQSRALQKAVEQAYSGLLIVGRYPMGVINIWLDG 294
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
VDVN+HPTK EV F E+ + VQ ++ L+
Sbjct: 295 ALVDVNIHPTKAEVKFSDENAVFTSVQRVVRSALV 329
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L S + + V +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPSSVVKELLENS-----LDAGAKRVDVVIREGGIGYIEVSDDGCGIVFSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +IS+ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESGTYLSLSGGEMVKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A + GT I LF +P R K LK P E +K+++VV YA+ P V FTL
Sbjct: 134 TR-MARSPGTTIKLTRLFSRVPARLKFLKTPQREASKVSEVVLSYALAYPEVKFTLSIDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + IYGN+++ ++
Sbjct: 193 RN--TLNTPGNGKLRDAVLEIYGNDVASKM 220
>gi|401826265|ref|XP_003887226.1| putative DNA mismatch repair protein [Encephalitozoon hellem ATCC
50504]
gi|392998385|gb|AFM98245.1| putative DNA mismatch repair protein [Encephalitozoon hellem ATCC
50504]
Length = 564
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 175/343 (51%), Gaps = 57/343 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KL V++RI+AGEVI RP + LKE +ENSLDA +T I V ++ GL L I+DNG
Sbjct: 2 EIRKLPRDVISRISAGEVITRPYSILKETIENSLDANATHIVVRIELDGLSL-TIEDNGD 60
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +ED ++C+++ TSKL + EDL S+S++GFRGEAL+SIS + + + +K K S Y
Sbjct: 61 GIHEEDFGLLCKQYCTSKLCKEEDLFSLSSYGFRGEALSSISRCSRIKVKSKRKESEIGY 120
Query: 126 RWCTYLADLMALALMEM------------------SQYLQRDKEQIGDKEEKQWYRTV-- 165
+++A+ + M ++ + +E++ E W +
Sbjct: 121 EAVYRDTEMVAMKGIGMRDGTVVEIKSIFYNNKAREKHFSKKREEV---REMMWLVGIFS 177
Query: 166 ---EHT---------LVPLMKSQYQP-------SEKIVERACLL-EIASLNNLELLSVEG 205
E+T L L K++ P +K ++ +L E+ N+ L G
Sbjct: 178 VFNENTSFDLFYGEKLQELPKARSNPHHDGRSNGDKARQKVKMLNELYKANDGLLFEFNG 237
Query: 206 TDDAFQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVY 259
D + + F+ KK F+LF+N + +K + + Y +P PF+Y
Sbjct: 238 --DHLII-----FSTPQFNLKKGAFILFVNGRLVVSHEMKEALFKAYKDLIPPDRRPFIY 290
Query: 260 LSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
+ L ++ VDVNVHP+K EV F +E+++ + + + L G
Sbjct: 291 IELSVEKSTVDVNVHPSKREVLFANEESVTQELFKCISNRLCG 333
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 7/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I R S+L++T+ S +T I V ++ GL L I+DNG GI +ED ++C+
Sbjct: 19 VITRPYSILKETIENS-----LDANATHIVVRIELDGLSL-TIEDNGDGIHEEDFGLLCK 72
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
++ TSKL + EDL S+S++GFRGEAL+SIS + + + +K K S Y A Y D+++
Sbjct: 73 QYCTSKLCKEEDLFSLSSYGFRGEALSSISRCSRIKVKSKRKESEIGYEAVYRDTEMV-A 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+K GT + + +FYN R K + EE ++ +V ++V N + F L
Sbjct: 132 MKGIGMRDGTVVEIKSIFYNNKAREKHFSKKREEVREMMWLVGIFSVFNENTSFDL 187
>gi|389696789|ref|ZP_10184431.1| DNA mismatch repair protein MutL [Microvirga sp. WSM3557]
gi|388585595|gb|EIM25890.1| DNA mismatch repair protein MutL [Microvirga sp. WSM3557]
Length = 616
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 176/365 (48%), Gaps = 54/365 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+++LD +V+RIAAGEV++RPA A+KEL+ENS+DA ++SI++ V+ GG +L++I D+G G
Sbjct: 3 VRRLDPILVDRIAAGEVVERPAAAVKELVENSVDAGASSIEIAVESGGRRLIRIVDDGRG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
+ ED+++ ER TSKL DL SI+T GFRGEAL SI VA L+I+T+T
Sbjct: 63 MTPEDLELAVERHATSKLPD-GDLFSINTLGFRGEALPSIGAVARLSIVTRTGEAETGSS 121
Query: 119 -----------KTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
+ +P + DL A + ++L+ D+ + E + H
Sbjct: 122 LVVEAGVKGPVRPAPAPKGTRVEVTDLFAATPARL-KFLKSDRSEAQAVAEIVKRLAIAH 180
Query: 168 TLVPLMKSQYQ------PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKV------- 214
+ S P E+ E L ++ +L E ++A + V
Sbjct: 181 PTIRFTLSGEHITAFTYPPEEPGEHGFLRRLS-----RVLGAEFHENAMSIGVEREGVRL 235
Query: 215 TGWITNVNFSTKKMTFLLFINN--PIK-----RMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
TG+ + + T + F+ N P++ + Y+ + P + + + +DP+
Sbjct: 236 TGFASLPTYHRGTGTAIHFVVNGRPVRDKLLLGAVRGAYADVMASDRHPVLAIMIDLDPR 295
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVK----QG 323
VDVNVHP K EV F + V L++ + T F ST T++ QG
Sbjct: 296 AVDVNVHPAKTEVRFRDPAFVRGFVVGALKEAI----TRYAFRASSTGGARTLESLRPQG 351
Query: 324 GLKLL 328
GL L
Sbjct: 352 GLPSL 356
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++SI++ V+ GG +L++I D+G G+ ED+++ ER TSKL DL SI+T GFRGEA
Sbjct: 39 ASSIEIAVESGGRRLIRIVDDGRGMTPEDLELAVERHATSKLPDG-DLFSINTLGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI VA L+I+T+T + + +++ +K P++P +GT++ DLF P R
Sbjct: 98 LPSIGAVARLSIVTRTGEAETGS-SLVVEAGVKGPVRPAPAPKGTRVEVTDLFAATPARL 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
K LK E +A++V R A+ +P + FTL ++
Sbjct: 157 KFLKSDRSEAQAVAEIVKRLAIAHPTIRFTLSGEH 191
>gi|229098237|ref|ZP_04229184.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|229117254|ref|ZP_04246632.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|423378446|ref|ZP_17355730.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|423441502|ref|ZP_17418408.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|423448272|ref|ZP_17425151.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|423464576|ref|ZP_17441344.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|423533918|ref|ZP_17510336.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
gi|423540813|ref|ZP_17517204.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|423547052|ref|ZP_17523410.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|423623157|ref|ZP_17598935.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|228666154|gb|EEL21618.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|228685135|gb|EEL39066.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|401128866|gb|EJQ36549.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|401172001|gb|EJQ79222.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|401178773|gb|EJQ85946.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|401259930|gb|EJR66104.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|401635213|gb|EJS52969.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|402418163|gb|EJV50463.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|402420843|gb|EJV53114.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|402464137|gb|EJV95837.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
Length = 647
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|410086326|ref|ZP_11283038.1| DNA mismatch repair protein MutL [Morganella morganii SC01]
gi|409767171|gb|EKN51251.1| DNA mismatch repair protein MutL [Morganella morganii SC01]
Length = 632
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 170/333 (51%), Gaps = 45/333 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IRILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT ++T+ A
Sbjct: 63 IAKDELALALARHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTFTSRTRDQNEA-- 120
Query: 127 WCTYL-ADLMALALMEMS--------------------QYLQRDKEQIGDKEE------- 158
W Y MA+ L + ++L+ +K + G +E
Sbjct: 121 WQAYAEGREMAVTLKPAAHPAGSTVEVLDLFFNTPARRKFLRTEKTEFGHIDEVVRRIAL 180
Query: 159 KQWYRTVEHTLVPLMKSQYQP--SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
++ + T + QY+P +E ER + + L+V + + +L++ G
Sbjct: 181 SRFDVAINLTHNGKLMRQYRPVKAEDQQERRLGAICGTAFMQQALAVTWSHE--ELEIRG 238
Query: 217 WITN-VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ + ++ ++N + R I Q Y L P L L +DP+ V
Sbjct: 239 WVASPAEYNGPADLQYCYVNGRMMRDRLINHAIRQAYEDRLSGDQQPAYVLYLTIDPRQV 298
Query: 270 DVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DVNVHP KHEV F L D I + V S+L++
Sbjct: 299 DVNVHPAKHEVRFHQARLVHDFIYQAVLSVLKQ 331
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGEKLIRIRDNGCGIAKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT ++T+ A++A ++
Sbjct: 74 RHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTFTSRTRDQNEAWQAYAEGREMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+KP A G+ + DLF+N P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 LKPAAHPAGSTVEVLDLFFNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVAINL 189
>gi|218904896|ref|YP_002452730.1| DNA mismatch repair protein [Bacillus cereus AH820]
gi|226723026|sp|B7JJ46.1|MUTL_BACC0 RecName: Full=DNA mismatch repair protein MutL
gi|218536438|gb|ACK88836.1| DNA mismatch repair protein MutL [Bacillus cereus AH820]
Length = 647
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E ++ + G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEA--ESLDFTIQGY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRVRRFSSAS 504
+++++ + S
Sbjct: 214 IQVAKKLVPIEAES 227
>gi|160947535|ref|ZP_02094702.1| hypothetical protein PEPMIC_01469 [Parvimonas micra ATCC 33270]
gi|158446669|gb|EDP23664.1| DNA mismatch repair domain protein [Parvimonas micra ATCC 33270]
Length = 616
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 173/335 (51%), Gaps = 41/335 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L E + +IAAGEVI+ P + +KEL+ENS+D+ +T I+V +K G K + I DNG G
Sbjct: 3 IKLLSEDTIQKIAAGEVIENPYSVIKELVENSIDSGATFIKVEIKNAGKKEIMISDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+++ + TSKL FED+ SI ++GFRGEALASIS ++ + I T+TK S
Sbjct: 63 IEEDDIELAFTKHATSKLNNFEDIYSILSYGFRGEALASISAISKVDINTRTKNSEFGIH 122
Query: 127 WCTYLADLMALALMEMSQYLQ--------------RDKEQIGDKEEKQWYRTVEHTLVPL 172
C YL + + ++ L R K D E T+ ++
Sbjct: 123 -C-YLENNKIIRKNKIGMNLGTTIYIRDLFYNVPIRKKFLKSDAYENSIITTLMYSFA-- 178
Query: 173 MKSQYQPSEKIVERACLLEIASLNNLE--------------LLSVEGTDDAFQLKVTGWI 218
+ +Q + I + + E + N L+ L+SV D + K+ G+I
Sbjct: 179 LANQKISFKYIKDSKVVFETSEKNTLKDDIKYIFKDDFYKNLISVNIEDSDY--KIYGYI 236
Query: 219 TNVNF-STKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+N +F + + LF+N I+ +IE+ + +PKG FP + + ++P +D+
Sbjct: 237 SNNHFYKGSRASQFLFVNGRYIFDEKIRNIIEKSIATLIPKGKFPAFVMFIEVNPSLIDI 296
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
NVHP K ++ F+ ED ++ + + + +L + TS
Sbjct: 297 NVHPNKRKIKFIFEDKLLNSLNNNITDIVLKNTTS 331
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V +K G K + I DNG GI ++D+++ + TSKL FED+ SI ++GFRGEA
Sbjct: 39 ATFIKVEIKNAGKKEIMISDNGCGIEEDDIELAFTKHATSKLNNFEDIYSILSYGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--KDPIKPCAGNQGTQIIAEDLFYNIPT 430
LASIS ++ + I T+TK S ++K+ K+ I N GT I DLFYN+P
Sbjct: 99 LASISAISKVDINTRTKNSEFGIHCYLENNKIIRKNKI---GMNLGTTIYIRDLFYNVPI 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGF 461
R+K LK + E + I ++ +A+ N + F
Sbjct: 156 RKKFLKSDAYENSIITTLMYSFALANQKISF 186
>gi|421491529|ref|ZP_15938892.1| MUTL [Morganella morganii subsp. morganii KT]
gi|455737370|ref|YP_007503636.1| DNA mismatch repair protein MutL [Morganella morganii subsp.
morganii KT]
gi|400193963|gb|EJO27096.1| MUTL [Morganella morganii subsp. morganii KT]
gi|455418933|gb|AGG29263.1| DNA mismatch repair protein MutL [Morganella morganii subsp.
morganii KT]
Length = 632
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 170/333 (51%), Gaps = 45/333 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IRILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT ++T+ A
Sbjct: 63 IAKDELALALARHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTFTSRTRDQNEA-- 120
Query: 127 WCTYL-ADLMALALMEMS--------------------QYLQRDKEQIGDKEE------- 158
W Y MA+ L + ++L+ +K + G +E
Sbjct: 121 WQAYAEGREMAVTLKPAAHPAGSTVEVLDLFFNTPARRKFLRTEKTEFGHIDEVVRRIAL 180
Query: 159 KQWYRTVEHTLVPLMKSQYQP--SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
++ + T + QY+P +E ER + + L+V + + +L++ G
Sbjct: 181 SRFDVAINLTHNGKLMRQYRPVKAEDQQERRLGAICGTAFMQQALAVTWSHE--ELEIRG 238
Query: 217 WITN-VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ + ++ ++N + R I Q Y L P L L +DP+ V
Sbjct: 239 WVASPAEYNGPADLQYCYVNGRMMRDRLINHAIRQAYEDRLSGDQQPAYVLYLTIDPRQV 298
Query: 270 DVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DVNVHP KHEV F L D I + V S+L++
Sbjct: 299 DVNVHPAKHEVRFHQARLVHDFIYQAVLSVLKQ 331
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 5/176 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGEKLIRIRDNGCGIAKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT ++T+ A++A ++
Sbjct: 74 RHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTFTSRTRDQNEAWQAYAEGREMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+KP A G+ + DLF+N P RRK L+ E+ I +VV R A+ V L
Sbjct: 134 LKPAAHPAGSTVEVLDLFFNTPARRKFLRTEKTEFGHIDEVVRRIALSRFDVAINL 189
>gi|253996214|ref|YP_003048278.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
gi|253982893|gb|ACT47751.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
Length = 610
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 162/329 (49%), Gaps = 42/329 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + ++++IAAGEV++RPA+ALKELLENSLDA ST IQV++ QGG+K +++ DNG G
Sbjct: 4 IRLLPDQLISQIAAGEVVERPASALKELLENSLDAGSTDIQVSLLQGGIKQMRVTDNGAG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ KED+ + R TSK++ EDL S+++ GFRGEALASI+ ++ ++++ S A+R
Sbjct: 64 VAKEDLMLALTRHATSKISSLEDLESVASLGFRGEALASIASISRTQLLSRQSGSKHAWR 123
Query: 127 WCT--------YLADLMALALMEMS----------QYLQRDKEQIGDKEEKQWYRTVEHT 168
+ A L A ++E+S ++L+ + + G EE +
Sbjct: 124 IGSEGSEVSTIEPAALDAGTVIEVSDLYFNTPARRKFLKTEATEFGHCEEMFTRIALSRP 183
Query: 169 LVPLMKSQY----------QPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
V LM QP + E +A S+ + A L++ G
Sbjct: 184 DVSLMLQHNGRALSRFAIGQPERRFSEVLGSEFVAE-------SIPVDESAAGLRLWGMA 236
Query: 219 TNVNFS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
F+ + T +++N I I Q Y L P L L +DP VDV
Sbjct: 237 AKPTFNRNSRDTQYVYVNGRFVRDKVIAHAIRQAYQDVLHHDRHPAFVLFLELDPSLVDV 296
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
NVHP K EV F + + L K L
Sbjct: 297 NVHPAKTEVRFRDSQAVHRFIFHALHKAL 325
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S L++ L S ST IQV++ QGG+K +++ DNG G+ KED+ +
Sbjct: 20 VVERPASALKELLENS-----LDAGSTDIQVSLLQGGIKQMRVTDNGAGVAKEDLMLALT 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL S+++ GFRGEALASI+ ++ ++++ S A+R S++
Sbjct: 75 RHATSKISSLEDLESVASLGFRGEALASIASISRTQLLSRQSGSKHAWRIGSEGSEVST- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P A + GT I DL++N P RRK LK + E+ ++ +R A+ P V L+
Sbjct: 134 IEPAALDAGTVIEVSDLYFNTPARRKFLKTEATEFGHCEEMFTRIALSRPDVSLMLQHNG 193
Query: 468 ENLA 471
L+
Sbjct: 194 RALS 197
>gi|289450496|ref|YP_003475197.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185043|gb|ADC91468.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 677
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 35/329 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LD N IAAGEV++RPA+ +KEL EN+LDA + +I++T+K GG LQ+ D+G
Sbjct: 3 KIKVLDVQTANSIAAGEVVERPASVVKELCENALDAGAGNIKITIKNGGNSYLQVLDDGC 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
G+ ED + TSKL+ DL+++ T GFRGEALASI+ VA + +IT+T +P A
Sbjct: 63 GMTGEDAKLAFLPHATSKLSVISDLDNLDTMGFRGEALASIAAVAKVNLITRTADAPSAV 122
Query: 126 -------RW------------CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVE 166
+W C + DL ++L++D ++ + +
Sbjct: 123 TLQVDGGKWSEITPVGAPIGTCITVEDLF-FNTPARFKFLKKDSTELNKIIDIVQKLALA 181
Query: 167 HTLVPLMKSQ------YQPSEKIVERACLLEIASLNNLELLSVEGTD--DAFQLKVTGWI 218
V + S + P + EL+++ D D +KV+G I
Sbjct: 182 RPDVSFLLSTPERILLHTPGNNDLPSVVFSLFGKQTASELIALPELDMADNSPVKVSGLI 241
Query: 219 TNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ + + + L+F+NN + + I++ Y L KG +P V + L + P VD+
Sbjct: 242 GQPGAARSSRASQLVFVNNRPVHDIAVTKAIDEAYRDRLMKGKYPVVIIKLNLPPYLVDI 301
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
NVHP K EV F + T+ V ++ L
Sbjct: 302 NVHPQKSEVRFWNSGTVFNSVYHTIKSAL 330
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 3/178 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ +I++T+K GG LQ+ D+G G+ ED + TSKL+ DL+++ T GFRGEA
Sbjct: 40 AGNIKITIKNGGNSYLQVLDDGCGMTGEDAKLAFLPHATSKLSVISDLDNLDTMGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ VA + +IT+T +P A K + I P GT I EDLF+N P R
Sbjct: 100 LASIAAVAKVNLITRTADAPSAVTLQVDGGKWSE-ITPVGAPIGTCITVEDLFFNTPARF 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
K LK+ S E NKI D+V + A+ P V F L L + T N+ V+ +++G
Sbjct: 159 KFLKKDSTELNKIIDIVQKLALARPDVSFLLSTPERIL--LHTPGNNDLPSVVFSLFG 214
>gi|14577936|gb|AAK68861.1| HexB [Lactococcus lactis]
Length = 323
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 33/311 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPATVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122
Query: 120 -----------TSPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSLP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 300
Query: 275 PTKHEVHFLHE 285
PTK EV E
Sbjct: 301 PTKQEVRLSKE 311
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSTAEEESGTKLVAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 217 TAKKMRQIKGS 227
>gi|357417053|ref|YP_004930073.1| DNA mismatch repair protein [Pseudoxanthomonas spadix BD-a59]
gi|355334631|gb|AER56032.1| DNA mismatch repair protein [Pseudoxanthomonas spadix BD-a59]
Length = 610
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 49/355 (13%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I++L ET++N+IAAGEV++RPA+ +KEL+EN+LDA + + + +++GG+ L++I+D+
Sbjct: 2 PVPIRQLPETLINQIAAGEVVERPASVVKELVENALDAGAQRVDIDLEEGGIGLIRIRDD 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASIS------------HVAH 111
G GI E++ + R TSK+ +DL +++T GFRGEAL SI+ H AH
Sbjct: 62 GGGIAPEELALALSRHATSKIASLDDLEAVATLGFRGEALPSIASVSRLSLSSRRAHDAH 121
Query: 112 LTIITK-----TKTSPCAY-RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT- 164
+ + PC + + T + + ++L+ ++ ++G EE W R+
Sbjct: 122 GATLQVDGGRLGQVGPCQHGQGTTVEVRELFYNVPARRKFLRAERTELGHIEE--WLRSL 179
Query: 165 ----------VEHTLVPLMK----SQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAF 210
V H + SQ +P+ ++ E + AS + L VE + A
Sbjct: 180 ALARPDVELRVSHNGRASRRYKGGSQAEPALRLHE-TLGQDFAS----QALRVEHS--AA 232
Query: 211 QLKVTGWITNVNFS--TKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
L++ GWI +S + +L P++ + Y L G P L L
Sbjct: 233 GLRLHGWIAQPAYSRASADQQYLYVNGRPVRDRNIAHAVRLAYQDVLHHGRQPAYVLFLE 292
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQV 318
+DP VDVNVHP KHEV F I + V L + L + + +Q
Sbjct: 293 LDPARVDVNVHPAKHEVRFRESRMIHDFVHRTLHEALAATRAGVAGGVEQAPVQA 347
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+ + +++GG+ L++I+D+G GI E++ + R TSK+ +DL +++T GFRGEAL S
Sbjct: 44 VDIDLEEGGIGLIRIRDDGGGIAPEELALALSRHATSKIASLDDLEAVATLGFRGEALPS 103
Query: 376 ISHVAHLTIITKTKTSPCAYRASY-IDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA 434
I+ V+ L++ ++ A+ A+ +D + PC QGT + +LFYN+P RRK
Sbjct: 104 IASVSRLSLSSRRAHD--AHGATLQVDGGRLGQVGPCQHGQGTTVEVRELFYNVPARRKF 161
Query: 435 LKQPSEEYNKIADVVSRYAVHNPHV 459
L+ E I + + A+ P V
Sbjct: 162 LRAERTELGHIEEWLRSLALARPDV 186
>gi|117919048|ref|YP_868240.1| DNA mismatch repair protein [Shewanella sp. ANA-3]
gi|189030415|sp|A0KSR5.1|MUTL_SHESA RecName: Full=DNA mismatch repair protein MutL
gi|117611380|gb|ABK46834.1| DNA mismatch repair protein MutL [Shewanella sp. ANA-3]
Length = 648
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 172/338 (50%), Gaps = 55/338 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYRTVE 166
AD MA+ +M + ++L+ DK + +E W + +
Sbjct: 123 AYAEGAD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRIA 179
Query: 167 HTLVPLMKSQYQ----PSEKIVE--RACLLEIASLNNL----------ELLSVEGTDDAF 210
L++ + KIV R + E L L E L VE D
Sbjct: 180 -----LVRGDIHFTLTHNGKIVRNCRPAMNEPQYLQRLTQVAGRQFADEALRVECQHD-- 232
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNPIKR---MIEQVYSIYLPKGSF--PFVYLSLCMD 265
L+++G++ + + T ++N + R + V + K P L L +D
Sbjct: 233 DLRLSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDID 292
Query: 266 PKNVDVNVHPTKHEVHFLH----EDTIIERVQSMLEKT 299
P VDVNVHP KHEV F D I++ +QS LE+
Sbjct: 293 PHQVDVNVHPAKHEVRFHQSRYVHDYILQALQSALEEA 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI K+++ + R TSKL +DL +I +FGFRGEA
Sbjct: 39 ATRIDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + + + P A G+ I DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQTEAWQAYAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN 478
+ LK E+ I + + R A+ + FTL + + + R +N
Sbjct: 159 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKIVRNCRPAMN 204
>gi|421107100|ref|ZP_15567659.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri str. H2]
gi|410007872|gb|EKO61552.1| DNA mismatch repair protein, C-terminal domain protein [Leptospira
kirschneri str. H2]
Length = 593
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNG
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDACATQVDVESKDGGLSLLRITDNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 RWCT------------------YLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ + L + + ++L+ RD+ Q +
Sbjct: 123 KIGSIAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVSTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPARENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNG GI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGIGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ I K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKIGSIAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D VS A+ V F L + + + + N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVSTQALAREDVRFRLFQDGKEVFVLPARENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|418696671|ref|ZP_13257677.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. H1]
gi|409955593|gb|EKO14528.1| MutL C-terminal dimerization domain protein [Leptospira kirschneri
str. H1]
Length = 593
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 55/340 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNG
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDACATQVDVESKDGGLSLLRITDNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 RWCT------------------YLADLMALALMEMSQYLQ---------RDK--EQIGDK 156
+ + L + + ++L+ RD+ Q +
Sbjct: 123 KIGSIAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVE------RACLLEIASLNNLELLSVEGTDDAF 210
E+ ++ + V ++ ++ E+I++ R LLE++ LE ++ T
Sbjct: 183 EDVRFRLFQDGKEVFVLPARENKKERIIDLFGENFRDHLLEVS----LERGGIQAT---- 234
Query: 211 QLKVTGWITNVNF--STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYLSLC 263
G+I++ +F S + F+ PI+ ++++ Y LP P+ +L
Sbjct: 235 -----GYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 290 IDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + V K GGL LL+I DNG GI ED++ +R TSK+ ++DL S+ ++GFRGEA
Sbjct: 40 ATQVDVESKDGGLSLLRITDNGIGIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ + TK A++ I K+ + + G GT+I+ E+LF+N P RR
Sbjct: 100 LASIASVSRLTLESGTKEQKTAWKIGSIAGKISEK-EEIPGFIGTKILVEELFFNTPVRR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E KI D V+ A+ V F L + + + + N E I +++G N
Sbjct: 159 KFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGKEVFVLPARENK--KERIIDLFGEN 216
Query: 493 I 493
Sbjct: 217 F 217
>gi|416891590|ref|ZP_11923137.1| DNA mismatch repair protein [Aggregatibacter aphrophilus ATCC
33389]
gi|347815138|gb|EGY31778.1| DNA mismatch repair protein [Aggregatibacter aphrophilus ATCC
33389]
Length = 615
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 50/324 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRVLSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQHEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHT 168
W Y +M +Q IG + EK + ++
Sbjct: 121 WQVYAQG------RDMETTIQPASHPIGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 169 LVPLMKSQYQPSEKIVERACLLE-----IASLNNLELLSVEGTDDAFQ-----------L 212
+ + +++ S + +L + + L+ ++ DD Q L
Sbjct: 175 IRRIALAKFNISFTLTHNGKVLRQYKSAVTNEQKLKRVAAICGDDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GWI +F+ + ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWIALPHFNRPQNDLNYCYVNGRMVRDKIITHAIRQAYAEYLSNDQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHFLHEDTII 289
P +VDVNVHPTKHEV F H+ ++
Sbjct: 295 PNDVDVNVHPTKHEVRF-HQSRLV 317
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ ++ I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQHEAWQVYAQGRDMETTIQPASHPIGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV-NSSHSEVIGNIYGNNI 493
+ E++ I +V+ R A+ ++ FTL + L ++ V N + + I G++
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFNISFTLTHNGKVLRQYKSAVTNEQKLKRVAAICGDDF 220
>gi|296125279|ref|YP_003632531.1| DNA mismatch repair protein MutL [Brachyspira murdochii DSM 12563]
gi|296017095|gb|ADG70332.1| DNA mismatch repair protein MutL [Brachyspira murdochii DSM 12563]
Length = 608
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 182/362 (50%), Gaps = 42/362 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGEVI+RPA+ LKELLEN++D+ ++ I+V+V++ G+K + ++DNG G
Sbjct: 5 IMKLPQSVANRIAAGEVIERPASMLKELLENAVDSGASDIEVSVEEAGIKSMIVEDNGDG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
I +++ + TSK+ EDL+SI T GFRGEALASIS V +L I++K++
Sbjct: 65 IHFDELPLAVTHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSRDENNGGK 124
Query: 122 ------------PCAYRWCT-YLADLMALALMEMSQYLQR-DKEQIGDKEEKQWYRTVEH 167
P A T +A + + ++L+ +E KE V+
Sbjct: 125 IIIEGGKIIEHKPAAASQGTKVIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 184
Query: 168 TLVPLMK------SQYQPSEKIVERA--CLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
+ +K S Y ++ + +R L + NL + +E D + + G +
Sbjct: 185 QISMKLKNNGKVVSSYIKADTLKDRIENYLSDSNIFRNLIEIEIEKND----VLIYGLFS 240
Query: 220 N--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +D +DVN
Sbjct: 241 NSKISQSIRKNNFIFLNNRPIENRVLSYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVN 300
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQD 332
VHP+K EV +E + ML + + + S +I+V + + IQ+
Sbjct: 301 VHPSKKEVRIKNE----REISGMLYNAISNNINNAGNNFDSVNIEVDIDKDITPTFPIQN 356
Query: 333 NG 334
N
Sbjct: 357 NN 358
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER SML++ L + S ++ I+V+V++ G+K + ++DNG GI +++ +
Sbjct: 21 VIERPASMLKELLENAVDS-----GASDIEVSVEEAGIKSMIVEDNGDGIHFDELPLAVT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL+SI T GFRGEALASIS V +L I++K++ + K+ +
Sbjct: 76 HHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSRDENNGGKIIIEGGKIIEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
KP A +QGT++IA++LF+NIP R K LK S E+ + +V A+ P + LK
Sbjct: 136 -KPAAASQGTKVIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQPQISMKLK 191
>gi|442610707|ref|ZP_21025417.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747736|emb|CCQ11479.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 614
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 166/342 (48%), Gaps = 70/342 (20%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLD+ +T IQ+ +++GG KL++I+DNG+G
Sbjct: 4 IEILPAQLANQIAAGEVVERPASVVKELVENSLDSGATRIQIDIERGGHKLIRIRDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K + A++
Sbjct: 64 IAKEELTLALSRHATSKLKTLDDLENIISLGFRGEALASISSVSRLTLSSKPQAQETAWQ 123
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + S ++L+ +K + +E
Sbjct: 124 AFAEGRD-MAVQVQPTSHPDGTTVEVKDLFFNTPARRKFLRTEKTEFAHIDELVKRIALS 182
Query: 160 ---------------QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVE 204
+ YR+ + + + + +E+A LE
Sbjct: 183 RFDVAFTLTHNNKVIRQYRSCGSSEANVQRVAQVGGKAFIEQASFLE------------S 230
Query: 205 GTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFV 258
GTD L + GW+ + T T ++N + R I Q Y + P
Sbjct: 231 GTDG---LHLLGWLMPI--GTSGATQYTYVNGRMMRDKLILHAIRQAYEEIIGAQEIPSF 285
Query: 259 YLSLCMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSML 296
L L +DP+ VDVNVHP KHEV F L D I++ V+ ++
Sbjct: 286 VLYLELDPRQVDVNVHPAKHEVRFHQARLIHDFIVQAVRQVV 327
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + +T IQ+ +++GG KL++I+DNG+GI KE++ +
Sbjct: 20 VVERPASVVKELVENS-----LDSGATRIQIDIERGGHKLIRIRDNGSGIAKEELTLALS 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I + GFRGEALASIS V+ LT+ +K + A++A +
Sbjct: 75 RHATSKLKTLDDLENIISLGFRGEALASISSVSRLTLSSKPQAQETAWQAFAEGRDMAVQ 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P + GT + +DLF+N P RRK L+ E+ I ++V R A+ V FTL N
Sbjct: 135 VQPTSHPDGTTVEVKDLFFNTPARRKFLRTEKTEFAHIDELVKRIALSRFDVAFTLTHNN 194
Query: 468 ENLADIRT 475
+ + R+
Sbjct: 195 KVIRQYRS 202
>gi|92113401|ref|YP_573329.1| DNA mismatch repair protein [Chromohalobacter salexigens DSM 3043]
gi|123387512|sp|Q1QY28.1|MUTL_CHRSD RecName: Full=DNA mismatch repair protein MutL
gi|91796491|gb|ABE58630.1| DNA mismatch repair protein MutL [Chromohalobacter salexigens DSM
3043]
Length = 644
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 46/317 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I LD + N+IAAGEV++RPA+ +KEL+EN++DA S I++ ++ GG +L++++D+G
Sbjct: 6 RIHILDPRLANQIAAGEVVERPASVVKELVENAIDAGSQRIEIDLESGGARLIRVRDDGR 65
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI +ED+ + R TSK+ +DL + + GFRGEALASIS V+ L +I+ T
Sbjct: 66 GIDQEDLPLALSRHATSKIASLDDLEGVDSLGFRGEALASISSVSRLELISNTHDEPSDG 125
Query: 119 ------------KTSPCAY-RWCTYLADLMALALMEMSQYLQRDKEQIGDKEEK------ 159
+ +P + R + + + ++L+ +K + G EE
Sbjct: 126 WRVVAEGRQMEPRVTPAPHPRGSSVVVRDLFFNTPARRKFLRTEKTEFGHVEEAFRRLAL 185
Query: 160 -----QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKV 214
W +V +++ + LL L N + +E T L++
Sbjct: 186 SRYDIGWILRHNQKVVHQLRAGDASTSMERRVGALLGRKFLENALHVDIEATG----LRL 241
Query: 215 TGWI---TNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
GW+ T+ + F F+N + R + Q Y + G P L L +D
Sbjct: 242 WGWVGLPTHSRAQADQQYF--FVNGRVVRDRLVAHAVRQAYRDVMFHGRHPVFVLYLELD 299
Query: 266 PKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 300 PHVVDVNVHPTKHEVRF 316
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S I++ ++ GG +L++++D+G GI +ED+ + R TSK+ +DL + + GFRGEA
Sbjct: 43 SQRIEIDLESGGARLIRVRDDGRGIDQEDLPLALSRHATSKIASLDDLEGVDSLGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPC-AYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASIS V+ L +I+ T P +R +++ + P +G+ ++ DLF+N P R
Sbjct: 103 LASISSVSRLELISNTHDEPSDGWRVVAEGRQMEPRVTPAPHPRGSSVVVRDLFFNTPAR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRT-NVNSSHSEVIGNIYG 490
RK L+ E+ + + R A+ +G+ L+ + + +R + ++S +G + G
Sbjct: 163 RKFLRTEKTEFGHVEEAFRRLALSRYDIGWILRHNQKVVHQLRAGDASTSMERRVGALLG 222
>gi|421862792|ref|ZP_16294496.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379702|emb|CBX21691.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 658
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 82/351 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD +Q+ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDGKQV--------FKL--------------PAQNLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKAL 325
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 120/213 (56%), Gaps = 7/213 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRT-NVNSSHSEVIGNIY 489
H+ F+LK+ + + + N++ + ++G+ +
Sbjct: 184 HIAFSLKRDGKQVFKLPAQNLHERIAAIVGDDF 216
>gi|455644844|gb|EMF23937.1| DNA mismatch repair protein [Citrobacter freundii GTC 09479]
Length = 621
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 54/340 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENS+DA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ P A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGT---DDAFQLK------ 213
+ R L NL L ++ GT ++A ++
Sbjct: 175 IRRIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTPFLENALAIEWQHGDL 234
Query: 214 -VTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T + + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 102/167 (61%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----IDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ P A++A +
Sbjct: 74 RHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|402817015|ref|ZP_10866604.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
gi|402505121|gb|EJW15647.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
Length = 795
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 170/331 (51%), Gaps = 39/331 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE + N+IAAGEV++RP++ +KEL+ENS+DA +T I V+V++GGL+L++++DNG+G
Sbjct: 4 IKVLDEHIANQIAAGEVVERPSSVVKELVENSIDAGATRIDVSVEEGGLQLIRVKDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +D + R TSK+ +DL SI + GFRGEAL SI+ VA + ++T T +S R
Sbjct: 64 IGDDDAENAFLRHATSKIQTGKDLFSIRSLGFRGEALPSIAAVAKVELVTSTDSSGLGRR 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD-----KEEKQWYRTVEHTLVPLMKSQYQPSE 181
+ + E +Q +Q + + D ++ +T++ L + Y+ +
Sbjct: 124 LVIEGGTIKSF---EPAQSMQGTEITVRDLFYNTPARLKYMKTIQTELGHISDLIYRLAM 180
Query: 182 KIVERACLLE------IASLNNLELL----SVEGTDDA----------FQLKVTGWITNV 221
A L+ + ++ N +LL SV G A +V G+I
Sbjct: 181 SYPNIAFTLKHNEHTLLQTIGNGDLLQVIASVYGVQTAKGMLHIKGEHLDFEVEGYIGKP 240
Query: 222 NFSTKKMTFLLFINN-------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+ + ++ N P+ + I + Y +LP +P + L + M P VDVNVH
Sbjct: 241 ELTRSNRNAMSWMINGRYVRSFPLNQAILRAYHTFLPINRYPMLVLHVNMHPSLVDVNVH 300
Query: 275 PTKHEVHFLHEDT----IIERVQSMLEKTLL 301
P K EV F E I E V+++L K L
Sbjct: 301 PAKLEVRFSKEAELCAFIEETVKTLLHKQRL 331
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 104/178 (58%), Gaps = 3/178 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V+V++GGL+L++++DNG+GI +D + R TSK+ +DL SI + GFRGEA
Sbjct: 40 ATRIDVSVEEGGLQLIRVKDNGSGIGDDDAENAFLRHATSKIQTGKDLFSIRSLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ VA + ++T T +S R +K +P QGT+I DLFYN P R
Sbjct: 100 LPSIAAVAKVELVTSTDSSGLGRRLVIEGGTIKS-FEPAQSMQGTEITVRDLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
K +K E I+D++ R A+ P++ FTLK L ++T N +VI ++YG
Sbjct: 159 KYMKTIQTELGHISDLIYRLAMSYPNIAFTLKHNEHTL--LQTIGNGDLLQVIASVYG 214
>gi|423615970|ref|ZP_17591804.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
gi|401260507|gb|EJR66680.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
Length = 650
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LMIKGGDIIKREKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H + L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEISL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + ++Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLMIKGGDIIKREKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P + L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEISLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|266623036|ref|ZP_06115971.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
gi|288865200|gb|EFC97498.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
Length = 662
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 157/320 (49%), Gaps = 55/320 (17%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I LD+ +N+IAAGEVI+RPA+ +KELLEN++DA++T++ V +K+GG +++ DNG
Sbjct: 2 PNITLLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTTFIRVTDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI +E++ + R +TSK+ EDL +IS+ GFRGEALASI+ V + +ITKT +
Sbjct: 62 CGIPREEVPLAFLRHSTSKIKSVEDLFTISSLGFRGEALASIAAVCQVELITKTSEALTG 121
Query: 125 YRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY-RTVEHTLVPLMKSQYQPSEKI 183
R+ ++ ++R E+IG E + R + + K P +
Sbjct: 122 SRY-------------QIEGGMERPLEEIGAPEGTTFIARNLFYNTPARRKFLKTPMTEG 168
Query: 184 VERACLLEIASL-----------NNLELLSVEGTDD-------AFQLKVTGWITNVNFST 225
A L+E +L NN L G + F ++ + V
Sbjct: 169 SHVAELVEKIALSHPEISIRFIQNNQNKLHTSGNHNLKDIIYTVFGREIAANLLAVEAKK 228
Query: 226 KKMTFLLFINNP-----------------------IKRMIEQVYSIYLPKGSFPFVYLSL 262
+ ++ FI P I + IE+ Y ++ + +PF L
Sbjct: 229 QDISISGFIGKPVIARGNRNYENYFINGRYIRSSIISKAIEEAYKPFMMQHKYPFTMLHF 288
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
++P+ +DVNVHPTK E+ F
Sbjct: 289 TIEPELLDVNVHPTKMELRF 308
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 123/207 (59%), Gaps = 8/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + +R +T++ V +K+GG +++ DNG GI +E++ +
Sbjct: 20 VIERPASVVKELLENAIDAR-----ATAVTVEIKEGGTTFIRVTDNGCGIPREEVPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ EDL +IS+ GFRGEALASI+ V + +ITKT + R I+ ++ P
Sbjct: 75 RHSTSKIKSVEDLFTISSLGFRGEALASIAAVCQVELITKTSEALTGSRYQ-IEGGMERP 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IA +LFYN P RRK LK P E + +A++V + A+ +P + + N
Sbjct: 134 LEEIGAPEGTTFIARNLFYNTPARRKFLKTPMTEGSHVAELVEKIALSHPEISIRFIQNN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNIS 494
+N + T+ N + ++I ++G I+
Sbjct: 194 QN--KLHTSGNHNLKDIIYTVFGREIA 218
>gi|269925916|ref|YP_003322539.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC
BAA-798]
gi|269789576|gb|ACZ41717.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC
BAA-798]
Length = 586
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 175/322 (54%), Gaps = 32/322 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + ++AAGEV++RPA+ +KEL++NS+DA +T IQ+ V+ GGL L+++ DNGTG
Sbjct: 5 IKPLDQETIRQLAAGEVVERPASVVKELIDNSIDASATKIQIYVENGGLDLIRVVDNGTG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+++ ++ TSK++ EDL I+T GFRGEAL +I+ V+ L I +K SP A
Sbjct: 65 IPRKDLELCVQKHATSKISSPEDLYKINTLGFRGEALYAIASVSRLRIRSKHGDSPGAEL 124
Query: 127 WCTYLAD--LMALALMEMSQYLQRD--------KEQIGD--KEEKQWYRTVEHTLV--PL 172
C + + + + + +Q R+ + IG E + TV+ + P
Sbjct: 125 ECLSPGNTRIRTVGMPQGTQVEVRNLFYNVPARLKFIGGPTSEASRITSTVKQYALGHPN 184
Query: 173 MKSQYQPSEK----IVERACLLE-IASLNNLE----LLSVEGTDDAFQLKVTGWITNVNF 223
+ + Q K + +L+ I S+ L+ ++ V +D ++K + ++N
Sbjct: 185 IAFELQIDGKKQLETFGKGNILDCIGSVFGLQIRDHMIPVAYEEDEIEIKGYVSLPSINR 244
Query: 224 STKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKH 278
S + + P+ I++ YS L G FP V ++L + P+ VDVNVHPTK
Sbjct: 245 SNRSDIHVFVNGRPVSAKQLMFAIQESYSSLLMVGRFPIVIINLLIPPEFVDVNVHPTKA 304
Query: 279 EVHFLHEDTIIERVQSMLEKTL 300
EV F + RV S++ +T+
Sbjct: 305 EVRFADD----RRVASVVGRTI 322
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 18/227 (7%)
Query: 272 NVHPTKHE-VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQI 330
N+ P E + L ++ER S++++ + S +T IQ+ V+ GGL L+++
Sbjct: 4 NIKPLDQETIRQLAAGEVVERPASVVKELIDNS-----IDASATKIQIYVENGGLDLIRV 58
Query: 331 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 390
DNGTGI ++D+++ ++ TSK++ EDL I+T GFRGEAL +I+ V+ L I +K
Sbjct: 59 VDNGTGIPRKDLELCVQKHATSKISSPEDLYKINTLGFRGEALYAIASVSRLRIRSKHGD 118
Query: 391 SPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVS 450
SP A + I+ QGTQ+ +LFYN+P R K + P+ E ++I V
Sbjct: 119 SPGAELECLSPGNTR--IRTVGMPQGTQVEVRNLFYNVPARLKFIGGPTSEASRITSTVK 176
Query: 451 RYAVHNPHVGFTL----KKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
+YA+ +P++ F L KKQ E + N+ + IG+++G I
Sbjct: 177 QYALGHPNIAFELQIDGKKQLETFG--KGNI----LDCIGSVFGLQI 217
>gi|127511498|ref|YP_001092695.1| DNA mismatch repair protein [Shewanella loihica PV-4]
gi|189030413|sp|A3QAD8.1|MUTL_SHELP RecName: Full=DNA mismatch repair protein MutL
gi|126636793|gb|ABO22436.1| DNA mismatch repair protein MutL [Shewanella loihica PV-4]
Length = 631
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 195/388 (50%), Gaps = 83/388 (21%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + + +GG KL++I DNG+G
Sbjct: 3 IRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL++I +FGFRGEALASIS V+ LT+ ++T+ A
Sbjct: 63 IPKEELSLALSRHATSKLASLDDLDAILSFGFRGEALASISSVSRLTLTSRTQEQSEA-- 120
Query: 127 WCTYL-ADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYRTV 165
W Y MA+ ++ + ++L+ DK + +E W +
Sbjct: 121 WQAYAEGSEMAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTHIDE--WLKR- 177
Query: 166 EHTLVPLMKSQ--------------YQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ 211
+ L++S+ Y+P++ E L +A ++ D+A +
Sbjct: 178 ----IALVRSEIHFTLKHNGKQVRNYRPAK--TEAQYLQRLAQVSGKAF-----ADNALR 226
Query: 212 -------LKVTGWITNVNFSTKKM--TFLLFINNPIKR------MIEQVYSIYLPKGSFP 256
L ++G+I + FS + T ++N + R + Q ++ L
Sbjct: 227 VDCNHNGLSLSGYIQS-PFSEMAVGDTQYFYVNGRLVRDRLVNHAVRQAFAQQLQGEQVA 285
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKTLLGSNTSRVFYT 311
FV L L +DP VDVNVHP KHEV F HE D I++ ++S L + +S + +
Sbjct: 286 FV-LMLNLDPHQVDVNVHPAKHEVRF-HESRYVHDFILQALESALRQ------SSELAFE 337
Query: 312 QSTSIQVTVKQGG---LKLLQIQDNGTG 336
+ QVT + ++ LQ Q + TG
Sbjct: 338 AALDTQVTDQNRSASYIRPLQTQQSDTG 365
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T + + + +GG KL++I DNG+GI KE++ + R TSKL +DL++I +FGFRGEA
Sbjct: 39 ATRVDIEIDKGGSKLIKITDNGSGIPKEELSLALSRHATSKLASLDDLDAILSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T+ A++A S++ + P A G+ + A DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTQEQSEAWQAYAEGSEMAVRVIPAAHPVGSTVEAADLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSH-----SEVIGN 487
+ LK E+ I + + R A+ + FTLK + + + R + ++V G
Sbjct: 159 RFLKSDKTEFTHIDEWLKRIALVRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGK 218
Query: 488 IYGNNISR 495
+ +N R
Sbjct: 219 AFADNALR 226
>gi|427414200|ref|ZP_18904390.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
gi|425714576|gb|EKU77579.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
Length = 694
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 29/323 (8%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LDE +N+IAAGEV++RPA+ +KELLENSLDA +TSI+V + GG +++ DNG+G
Sbjct: 4 IHVLDEVTINKIAAGEVVERPASVIKELLENSLDAGATSIEVEIANGGTTYMRVTDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ +ED + R TSK+ +DL I++ GFRGEALASI+ V+H ++ T+ R
Sbjct: 64 MSEEDARLAVLRHATSKIRSVDDLFDIASLGFRGEALASIASVSHFSLTTRKVDQELGTR 123
Query: 127 WCT---YLADLMALALMEMSQYLQRD------KEQIGDKEEKQWYRTVEHTLVPLMKSQY 177
D + + RD + K E+ ++ + L S
Sbjct: 124 ILIDGGKFTDCLPFGAQPGTTIEVRDLFFNTPARRKFLKTERTESAKIQDIVGKLALSNP 183
Query: 178 QPSEKIVERACLLEIASLN-NL-----ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFL 231
+ K++ + + N NL L + +DD F + ++ K T L
Sbjct: 184 HVAFKLINNDTVSIVVPGNGNLIDTVSALYGYKVSDDIFPIVYESEGIHIQGVVSKPTLL 243
Query: 232 --------LFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
+ +NN I + I+ Y LPKG +P V L++ + P VD+NVHP K
Sbjct: 244 KSSRIWQTVVVNNRVIGDKAITKAIDNAYHALLPKGGYPLVLLTITVPPGTVDINVHPRK 303
Query: 278 HEVHFLHEDTIIERVQSMLEKTL 300
EV F + + + V + + L
Sbjct: 304 SEVKFEDDKPVFKAVYHAILQAL 326
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 280 VHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQ 331
+H L E TI +ER S++++ L S +TSI+V + GG +++
Sbjct: 4 IHVLDEVTINKIAAGEVVERPASVIKELLENS-----LDAGATSIEVEIANGGTTYMRVT 58
Query: 332 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 391
DNG+G+ +ED + R TSK+ +DL I++ GFRGEALASI+ V+H ++ T+
Sbjct: 59 DNGSGMSEEDARLAVLRHATSKIRSVDDLFDIASLGFRGEALASIASVSHFSLTTRKVDQ 118
Query: 392 PCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSR 451
R K D + P GT I DLF+N P RRK LK E KI D+V +
Sbjct: 119 ELGTRILIDGGKFTDCL-PFGAQPGTTIEVRDLFFNTPARRKFLKTERTESAKIQDIVGK 177
Query: 452 YAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
A+ NPHV F L N + I N + + + +YG +S
Sbjct: 178 LALSNPHVAFKLI--NNDTVSIVVPGNGNLIDTVSALYGYKVS 218
>gi|389605423|emb|CCA44341.1| DNA mismatch repair protein mutL [Neisseria meningitidis alpha522]
Length = 663
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 85/366 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD +Q+ K+ E++ IA++ +
Sbjct: 182 HPHIAFSLKRDGKQVF---------------------------KLPEQSLHERIAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKM-TFLLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRAD 331
Query: 310 YTQSTS 315
T+S S
Sbjct: 332 LTESVS 337
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S E I I G++
Sbjct: 184 HIAFSLKRDGKQVFKL---PEQSLHERIAAIVGDDF 216
>gi|78187823|ref|YP_375866.1| DNA mismatch repair protein [Chlorobium luteolum DSM 273]
gi|123743593|sp|Q3B1F8.1|MUTL_PELLD RecName: Full=DNA mismatch repair protein MutL
gi|78167725|gb|ABB24823.1| DNA mismatch repair protein MutL [Chlorobium luteolum DSM 273]
Length = 626
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 38/317 (11%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I +L + V N+I+AGEV+QRPA+ +KELLEN++D+ + I V +K G +L++I DNG
Sbjct: 2 PSIARLPDNVANKISAGEVVQRPASVVKELLENAIDSGADRISVVIKDAGRELVRIIDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ + D + ERF TSKL +DL+++ T GFRGEALASIS V+H + T+ +P A
Sbjct: 62 RGMSRADALLSVERFATSKLRDVDDLDTLGTLGFRGEALASISSVSHFELRTRMTDAPVA 121
Query: 125 --YRWCTYLA----DLMALALMEMS------------QYLQRDKEQIGDKEEKQWYRTVE 166
+R+ +A ++ A +S ++L+ + + G + V
Sbjct: 122 LRFRYEGGIAVEESEVQGEAGTSVSVRNLFYNVPARRKFLKSNATEYG-----HIFELVR 176
Query: 167 HTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAF--------QLKVTGWI 218
+ + Q+Q E L L+ +G D+ L + G+I
Sbjct: 177 SFSLAYPEIQWQLLNDDQELFNFRTSDMLERLDTFYGKGFADSLIEVGEENDYLSIRGYI 236
Query: 219 TNVNFST-KKMTFLLFINN-PIK-RMI----EQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
KK+ FIN PI+ RM+ +Q Y+ L + PF L L +DP VDV
Sbjct: 237 GRPALQKRKKLDQYFFINRRPIQNRMLTQALQQAYAELLVERQAPFALLFLGIDPSRVDV 296
Query: 272 NVHPTKHEVHFLHEDTI 288
NVHP K EV F E ++
Sbjct: 297 NVHPAKLEVRFDDERSV 313
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I V +K G +L++I DNG G+ + D + ERF TSKL +DL+++ T GFRGEALAS
Sbjct: 43 ISVVIKDAGRELVRIIDNGRGMSRADALLSVERFATSKLRDVDDLDTLGTLGFRGEALAS 102
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+H + T+ +P A R Y + + G GT + +LFYN+P RRK L
Sbjct: 103 ISSVSHFELRTRMTDAPVALRFRY-EGGIAVEESEVQGEAGTSVSVRNLFYNVPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
K + EY I ++V +++ P + + L ++ L + RT S E + YG +
Sbjct: 162 KSNATEYGHIFELVRSFSLAYPEIQWQLLNDDQELFNFRT---SDMLERLDTFYGKGFA 217
>gi|423611987|ref|ZP_17587848.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
gi|401246994|gb|EJR53338.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
Length = 647
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 168/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA TSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANGTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
TSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 GTSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLAAIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|113968940|ref|YP_732733.1| DNA mismatch repair protein [Shewanella sp. MR-4]
gi|123029966|sp|Q0HMP1.1|MUTL_SHESM RecName: Full=DNA mismatch repair protein MutL
gi|113883624|gb|ABI37676.1| DNA mismatch repair protein MutL [Shewanella sp. MR-4]
Length = 644
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 53/337 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA-- 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEKQWYR-- 163
W Y + MA+ +M + ++L+ DK + +E W +
Sbjct: 121 WQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRI 178
Query: 164 -----TVEHTLVPLMKS--QYQPS---EKIVERACLLEIASLNNL-ELLSVEGTDDAFQL 212
+ TL K+ Y+P+ + ++R L ++A E L VE D L
Sbjct: 179 ALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQR--LTQVAGRQFADEALRVECQHD--DL 234
Query: 213 KVTGWITNVNFSTKKMTFLLFINNPIKR---MIEQVYSIYLPKGSF--PFVYLSLCMDPK 267
+++G++ + + T ++N + R + V + K P L L +DP
Sbjct: 235 RLSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDIDPH 294
Query: 268 NVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKT 299
VDVNVHP KHEV F H+ D I++ +QS LE+
Sbjct: 295 QVDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEEA 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 96/166 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI K+++ + R TSKL +DL +I +FGFRGEA
Sbjct: 39 ATRIDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + + P A G+ I DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQTEAWQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN 478
+ LK E+ I + + R A+ + FTL + + + R +N
Sbjct: 159 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKTVRNYRPAMN 204
>gi|226326650|ref|ZP_03802168.1| hypothetical protein PROPEN_00500 [Proteus penneri ATCC 35198]
gi|225204871|gb|EEG87225.1| DNA mismatch repair domain protein [Proteus penneri ATCC 35198]
Length = 670
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 162/317 (51%), Gaps = 36/317 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + N+IAAGEV++RPA+ +KELLENSLDA +TSI + + +GG KL++I+DNG G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATSIDIDIDKGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+ + R TSK++ +DL +I + GFRGEALASIS V+ L + ++T+ A++
Sbjct: 63 INRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLILTSRTQDQEEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEE-------K 159
D MA+ + + ++L+ +K + +E
Sbjct: 123 AYAEGRD-MAVTIKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFAHIDEVIRRIALS 181
Query: 160 QWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
++ T+ T QY+ + ++ L NN S++ + + L + GW+
Sbjct: 182 RFDVTINLTHNGKRVRQYRAVKDESQQNRRLSAICGNNFVNQSMQLSWEHGDLAIKGWVE 241
Query: 220 N----VNFSTKKMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+ V S + ++ + + I I Q Y YL P L L +DP VDVN
Sbjct: 242 HPLSPVQSSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYILYLSVDPHQVDVN 301
Query: 273 VHPTKHEVHFLHEDTII 289
VHP KHEV F HE ++
Sbjct: 302 VHPAKHEVRF-HESRLV 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 6/207 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +TSI + + +GG KL++I+DNG GI ++D+ +
Sbjct: 19 VVERPASVVKELLENS-----LDAGATSIDIDIDKGGAKLIRIRDNGCGINRDDLKLALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ L + ++T+ A++A +
Sbjct: 74 RHATSKISTLDDLEAIMSMGFRGEALASISSVSRLILTSRTQDQEEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK L+ E+ I +V+ R A+ V L
Sbjct: 134 IKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFAHIDEVIRRIALSRFDVTINLTHNG 193
Query: 468 ENLADIRT-NVNSSHSEVIGNIYGNNI 493
+ + R S + + I GNN
Sbjct: 194 KRVRQYRAVKDESQQNRRLSAICGNNF 220
>gi|114048922|ref|YP_739472.1| DNA mismatch repair protein [Shewanella sp. MR-7]
gi|123030290|sp|Q0HR40.1|MUTL_SHESR RecName: Full=DNA mismatch repair protein MutL
gi|113890364|gb|ABI44415.1| DNA mismatch repair protein MutL [Shewanella sp. MR-7]
Length = 644
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 175/336 (52%), Gaps = 51/336 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA-- 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEKQWYR-- 163
W Y + MA+ +M + ++L+ DK + +E W +
Sbjct: 121 WQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRI 178
Query: 164 -----TVEHTLVPLMKS--QYQPS---EKIVERACLLEIASLNNL-ELLSVEGTDDAFQL 212
+ TL K+ Y+P+ + ++R L ++A E L VE D L
Sbjct: 179 ALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQR--LTQVAGRQFADEALRVECQHD--DL 234
Query: 213 KVTGWITNVNFSTKKMTFLLFINNPIKR---MIEQVYSIYLPKGSF--PFVYLSLCMDPK 267
+++G++ + + T ++N + R + V + K P L L +DP
Sbjct: 235 RLSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDIDPH 294
Query: 268 NVDVNVHPTKHEVHFLH----EDTIIERVQSMLEKT 299
VDVNVHP KHEV F D I++ +QS LE+
Sbjct: 295 QVDVNVHPAKHEVRFHQSRYVHDYILQALQSALEEA 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 96/166 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + + +GG KL++I+DNG+GI K+++ + R TSKL +DL +I +FGFRGEA
Sbjct: 39 ATRIDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++A + + P A G+ I DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQTEAWQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVN 478
+ LK E+ I + + R A+ + FTL + + + R +N
Sbjct: 159 RFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKTVRNYRPAMN 204
>gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
Length = 684
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 41/311 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD+ +N+IAAGEVI+RPA+ +KELLEN++DAKST++ V ++ GGL ++++ DNG G
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R
Sbjct: 64 IPKEEIPLAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSR 123
Query: 127 WCTYLADLMAL---ALMEMSQYLQRD-------------------------KEQIGDKEE 158
+ + +AL E + ++ R+ E+I
Sbjct: 124 YQIEGGEEIALEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHP 183
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
+ R +++ L S + I+ EIA+ L++V+ A +KV G+I
Sbjct: 184 EISIRLIQNGQSKLHTSGNHNLKDIIYTIFGREIAA----NLIAVQ--SGAEPVKVEGFI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N N+ + ++ I + IE Y ++ + +PF L ++P+ +DV
Sbjct: 238 GKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDV 297
Query: 272 NVHPTKHEVHF 282
NVHP K E+ F
Sbjct: 298 NVHPAKMELRF 308
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 125/218 (57%), Gaps = 8/218 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + ++ ST++ V ++ GGL ++++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELLENAVDAK-----STAVTVEIRDGGLSMIRVTDNGCGIPKEEIPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R I+ +
Sbjct: 75 RHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSRYQ-IEGGEEIA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IA +LFYN P RRK LK P E +AD+V + A+ +P + L +
Sbjct: 134 LEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHPEISIRLIQNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ + + T+ N + ++I I+G I+ + S ++
Sbjct: 194 Q--SKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAE 229
>gi|355628055|ref|ZP_09049570.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
gi|354819948|gb|EHF04380.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
Length = 684
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 41/311 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD+ +N+IAAGEVI+RPA+ +KELLEN++DAKST++ V ++ GGL ++++ DNG G
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R
Sbjct: 64 IPKEEIPLAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSR 123
Query: 127 WCTYLADLMAL---ALMEMSQYLQRD-------------------------KEQIGDKEE 158
+ + +AL E + ++ R+ E+I
Sbjct: 124 YQIEGGEEIALEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHP 183
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI 218
+ R +++ L S + I+ EIA+ L++V+ A +KV G+I
Sbjct: 184 EISIRLIQNGQSKLHTSGNHNLKDIIYTIFGREIAA----NLIAVQ--SGAEPVKVEGFI 237
Query: 219 -------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
N N+ + ++ I + IE Y ++ + +PF L ++P+ +DV
Sbjct: 238 GKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDV 297
Query: 272 NVHPTKHEVHF 282
NVHP K E+ F
Sbjct: 298 NVHPAKMELRF 308
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 125/218 (57%), Gaps = 8/218 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L + ++ ST++ V ++ GGL ++++ DNG GI KE++ +
Sbjct: 20 VIERPASVVKELLENAVDAK-----STAVTVEIRDGGLSMIRVTDNGCGIPKEEIPLAFL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++++ GFRGEAL+SI+ VA + +ITKT S R I+ +
Sbjct: 75 RHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSRYQ-IEGGEEIA 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ +GT IA +LFYN P RRK LK P E +AD+V + A+ +P + L +
Sbjct: 134 LEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHPEISIRLIQNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ + + T+ N + ++I I+G I+ + S ++
Sbjct: 194 Q--SKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAE 229
>gi|394987778|ref|ZP_10380617.1| hypothetical protein SCD_00178 [Sulfuricella denitrificans skB26]
gi|393792997|dbj|GAB70256.1| hypothetical protein SCD_00178 [Sulfuricella denitrificans skB26]
Length = 584
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 163/337 (48%), Gaps = 58/337 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + ++N+IAAGEV++RPA+ALKELLENS+DA + I VT+ QGG+K L++ D+G G
Sbjct: 4 IRVLPDLLINQIAAGEVVERPASALKELLENSVDAAANEIAVTLMQGGIKQLRVADDGIG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I E++ + R TSK+ +DL S+++ GFRGEALASI+ V+ L++I++ + A++
Sbjct: 64 IVAEELALALARHATSKIATLDDLESVNSLGFRGEALASIAAVSRLSLISRRRGERHAWK 123
Query: 127 WCTYLADLMAL--ALMEMS----------------QYLQRDKEQIGDKEE---------- 158
+D+ L A +E ++L+ + + G EE
Sbjct: 124 VEAAGSDVTGLQPAALESGTAVEVQDLYFNTPARRKFLKSEATEYGHCEEMFRRLALSRT 183
Query: 159 -----------KQW---YRTVEHTLVPLMKSQYQPSEKIV-ERACLLEIASLNNLELLSV 203
K W +E L+ ++ + I+ ERA L + + +L S
Sbjct: 184 DISFTLQHNGRKIWQLPAGPMERRAATLLGDEFAAASVILDERAGSLRLWGMASLPGFSR 243
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLC 263
G D + + N F K+ I I + Y L P L L
Sbjct: 244 GGRDAQY------FYVNGRFVRDKL---------IAHAIREAYKDILHNDRHPAFALFLE 288
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+DP+ VDVNVHPTK EV F I + + L K L
Sbjct: 289 IDPEGVDVNVHPTKIEVRFRDARAIHQFIYHALNKAL 325
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 103/183 (56%), Gaps = 6/183 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S L++ L S + + I VT+ QGG+K L++ D+G GI E++ +
Sbjct: 20 VVERPASALKELLENSVDA-----AANEIAVTLMQGGIKQLRVADDGIGIVAEELALALA 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL S+++ GFRGEALASI+ V+ L++I++ + A++ S +
Sbjct: 75 RHATSKIATLDDLESVNSLGFRGEALASIAAVSRLSLISRRRGERHAWKVEAAGSDVTG- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + +DL++N P RRK LK + EY ++ R A+ + FTL+
Sbjct: 134 LQPAALESGTAVEVQDLYFNTPARRKFLKSEATEYGHCEEMFRRLALSRTDISFTLQHNG 193
Query: 468 ENL 470
+
Sbjct: 194 RKI 196
>gi|332160020|ref|YP_004296597.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664250|gb|ADZ40894.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 635
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 173/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDADASRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + + + +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDADASRIDIDIERGGAKLIRIRDNGCGIGKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAAPDPSQHERRLASICG 217
>gi|154250749|ref|YP_001411573.1| DNA mismatch repair protein [Parvibaculum lavamentivorans DS-1]
gi|154154699|gb|ABS61916.1| DNA mismatch repair protein MutL [Parvibaculum lavamentivorans
DS-1]
Length = 602
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 158/326 (48%), Gaps = 61/326 (18%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++L E +NRIAAGEV++RPA+A+KEL+EN+LDA + I + + GG L+++ D+G
Sbjct: 3 RIRRLSEGTINRIAAGEVVERPASAVKELVENALDAGARHIDIVIDGGGRDLIRVTDDGI 62
Query: 66 GIRKEDMDIVCERFTTSKL----TQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
G+ E++ + ER TSKL EDL+ I+T GFRGEAL SI VA L+I+++T+ +
Sbjct: 63 GMNAEELALAVERHATSKLRIDAGGQEDLHDIATLGFRGEALPSIGAVARLSIVSRTRDA 122
Query: 122 PCAYRWCT---YLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQ 178
A R + D+ + +Q RD +Y T + MKS+
Sbjct: 123 DSAERISVEGGRVTDVEPASGRAGTQIEVRD----------LFYATPAR--LKFMKSERA 170
Query: 179 PS---EKIVERACLLE-------IASLNNLELLSVEGTDDAFQLKVTGWITNVNFS---- 224
+ +V+R + ++ NL L E DA +L G I +F+
Sbjct: 171 ETLAVSDVVKRLAMAHPEVGFTLTSAERNLLRLEPELPGDAGRLMRLGAIMGRDFAENAI 230
Query: 225 -----------------------TKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFP 256
T +M +L P++ + Y+ +L + P
Sbjct: 231 AIDAMREEIGLAGFAGLPTYNRGTAQMQYLFVNGRPVRDKLLVGAVRGAYADFLARDRHP 290
Query: 257 FVYLSLCMDPKNVDVNVHPTKHEVHF 282
V L + +DP++VDVNVHP K EV F
Sbjct: 291 AVALFVTIDPRDVDVNVHPAKAEVRF 316
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKL----TQFEDLNSISTFGFRGE 371
I + + GG L+++ D+G G+ E++ + ER TSKL EDL+ I+T GFRGE
Sbjct: 43 IDIVIDGGGRDLIRVTDDGIGMNAEELALAVERHATSKLRIDAGGQEDLHDIATLGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
AL SI VA L+I+++T+ + A R S ++ D ++P +G GTQI DLFY P R
Sbjct: 103 ALPSIGAVARLSIVSRTRDADSAERISVEGGRVTD-VEPASGRAGTQIEVRDLFYATPAR 161
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV--IGNIY 489
K +K E ++DVV R A+ +P VGFTL NL + + + +G I
Sbjct: 162 LKFMKSERAETLAVSDVVKRLAMAHPEVGFTLTSAERNLLRLEPELPGDAGRLMRLGAIM 221
Query: 490 GNNIS 494
G + +
Sbjct: 222 GRDFA 226
>gi|386311052|ref|YP_006007108.1| DNA mismatch repair protein MutL [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418239917|ref|ZP_12866461.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551883|ref|ZP_20507923.1| DNA mismatch repair protein MutL [Yersinia enterocolitica IP 10393]
gi|318607423|emb|CBY28921.1| DNA mismatch repair protein MutL [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780743|gb|EHB22808.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431787181|emb|CCO70963.1| DNA mismatch repair protein MutL [Yersinia enterocolitica IP 10393]
Length = 635
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 172/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDADASRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDADASRIDIDIERGGAKLIRIRDNGCGIGKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAAPDPSQHERRLASICG 217
>gi|399545796|ref|YP_006559104.1| DNA mismatch repair protein mutL [Marinobacter sp. BSs20148]
gi|399161128|gb|AFP31691.1| DNA mismatch repair protein mutL [Marinobacter sp. BSs20148]
Length = 633
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 53/321 (16%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I L + N+IAAGEV++RPA+ +KEL+EN+LDA ++ + V ++QGG+KL++++D+G
Sbjct: 2 PHIHLLTPRLANQIAAGEVVERPASVVKELIENALDAGASRVDVDIEQGGVKLIRVRDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI ED+ + R TSK+T +DL ++++ GFRGEALASIS V+ L++ ++T+
Sbjct: 62 CGIAAEDLSLALSRHATSKITSLDDLEAVASLGFRGEALASISSVSRLSLTSRTENQEAA 121
Query: 120 -------------TSPCAYRWCTYLA--DLMALALMEMSQYLQRDKEQIGDKEE------ 158
SP A+ + + DL ++L+ +K + G EE
Sbjct: 122 SKVEVEGREMDAHVSPAAHPVGSTVEVRDLF-FNTPARRKFLRTEKTEFGHVEECVRRQA 180
Query: 159 ----------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDD 208
+ R V+ +L P + S+ +I A L ++N +S E T
Sbjct: 181 LSRFDTGFNLRHNQRAVQ-SLRPAL-SELDKERRI---ASLCGQQFIDNAVAISAEATG- 234
Query: 209 AFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLS 261
LK+ GW+ FS + F+N + R + Q Y L L
Sbjct: 235 ---LKLWGWVALPTFSRSQTDLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHAAFVLY 291
Query: 262 LCMDPKNVDVNVHPTKHEVHF 282
L + P +VDVNVHPTK EV F
Sbjct: 292 LEVAPGSVDVNVHPTKDEVRF 312
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ + L + SRV V ++QGG+KL++++D+G GI ED+ +
Sbjct: 20 VVERPASVVKELIENALDAGASRV--------DVDIEQGGVKLIRVRDDGCGIAAEDLSL 71
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSK+T +DL ++++ GFRGEALASIS V+ L++ ++T+ A + ++
Sbjct: 72 ALSRHATSKITSLDDLEAVASLGFRGEALASISSVSRLSLTSRTENQEAASKVEVEGREM 131
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ P A G+ + DLF+N P RRK L+ E+ + + V R A+ GF L+
Sbjct: 132 DAHVSPAAHPVGSTVEVRDLFFNTPARRKFLRTEKTEFGHVEECVRRQALSRFDTGFNLR 191
Query: 465 KQNENLADIR 474
+ +R
Sbjct: 192 HNQRAVQSLR 201
>gi|431807712|ref|YP_007234610.1| DNA mismatch repair protein [Brachyspira pilosicoli P43/6/78]
gi|430781071|gb|AGA66355.1| DNA mismatch repair protein [Brachyspira pilosicoli P43/6/78]
Length = 599
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 185/368 (50%), Gaps = 59/368 (16%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
KL ++V NRIAAGE+I+RPA+ LKELLEN++D+ + +I+V+V++ G+K + ++DNG+GI
Sbjct: 2 KLPKSVANRIAAGEIIERPASMLKELLENAVDSGADNIEVSVEEAGIKTMIVEDNGSGIA 61
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRWC 128
E++ + TSK+ EDL++I T GFRGEALASI V +L I++K+ +
Sbjct: 62 FEELPLAITHHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGKIV 121
Query: 129 TYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTVEHTLVPLM 173
+ A ++E Y + +I K +++Y E V M
Sbjct: 122 -----VEAGKILEHKPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKE---VFDM 173
Query: 174 KSQYQP--SEKIVERACL----LEIASL--------------NNLELLSVEGTDDAFQLK 213
++ QP + K+ L L++ +L +NL L++E D +
Sbjct: 174 EALVQPNITMKLYNNGKLVNSYLKVDNLKDRIENYLNDSNIFSNLIELNIEKND----IN 229
Query: 214 VTGWITN--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ G +N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +D
Sbjct: 230 IYGLFSNSKISQSMRKNNFIFLNNRPIENRVIAYAIKNAYSNSIPKERYPFFFLYINVDT 289
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLK 326
VDVNVHP+K EV +E I S + + +N + V S +I+V + +
Sbjct: 290 NKVDVNVHPSKKEVRIKNERDI-----SGIIYNAIYNNINSVNNFSSVNIEVDIDKDITP 344
Query: 327 LLQIQDNG 334
IQ N
Sbjct: 345 TFPIQSNN 352
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER SML++ L + S + +I+V+V++ G+K + ++DNG+GI E++ +
Sbjct: 16 IIERPASMLKELLENAVDS-----GADNIEVSVEEAGIKTMIVEDNGSGIAFEELPLAIT 70
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL++I T GFRGEALASI V +L I++K+ + K+ +
Sbjct: 71 HHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGKIVVEAGKILEH 130
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
KP A GT+I A++LF+NIP R K LK S E+ + +V A+ P++ L
Sbjct: 131 -KPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKEVFDMEALVQPNITMKL 185
>gi|452995321|emb|CCQ93091.1| DNA mismatch repair protein MutL [Clostridium ultunense Esp]
Length = 612
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 170/325 (52%), Gaps = 31/325 (9%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK LDE + +IAAGE+I+RP++ +KEL+ENSLDAKS+SI + + GG +++ DNG
Sbjct: 3 KIKILDEFTIQKIAAGEIIERPSSVIKELIENSLDAKSSSITIEITNGGKNYIRVTDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC-- 123
G ++D+ I +R +TSKL EDL I +FGFRGEALASIS V+ + ++T+TK S
Sbjct: 63 GFAEDDLKIAFKRHSTSKLANIEDLYKIMSFGFRGEALASISAVSKMEVLTRTKNSLTGL 122
Query: 124 -AYRWCTYLADLMALALMEMSQYLQRD-------KEQIGDKEEKQWYRTVEHTLVPLMKS 175
A+ + + + + + + RD +E K + + T+ L
Sbjct: 123 QAFVENGEVKKIRPIGCPKGTTIIVRDLFYNLPVRENFL-KSDTVEANNISDTIYRLALG 181
Query: 176 QYQPSEK-IVERACLLEIASLNNL-----ELLSVEGTDDAFQLK-------VTGWITNVN 222
S K I + + I+ N+L LL E +++ + + G+I+N
Sbjct: 182 NNGISFKYIKDNKVVFNISKNNDLISNVYILLGKEFSENLIDINYRSSDFDIFGYISNNT 241
Query: 223 F--STKKMTFL-----LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
F S + +L N+ I +IE Y +P +P + + ++P +DVN+HP
Sbjct: 242 FYRSNRSHQYLYVNKRYVKNHFISNLIENKYKSIIPINRYPVFIIFIDINPLLIDVNIHP 301
Query: 276 TKHEVHFLHEDTIIERVQSMLEKTL 300
TK E+ F +++ I + +++E L
Sbjct: 302 TKQEIKFTNQNEIGQVFGTLIENEL 326
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 11/202 (5%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER S++++ + S ++ S+SI + + GG +++ DNG G ++D+ I +
Sbjct: 20 IIERPSSVIKELIENSLDAK-----SSSITIEITNGGKNYIRVTDNGDGFAEDDLKIAFK 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSKL EDL I +FGFRGEALASIS V+ + ++T+TK S +A + ++K
Sbjct: 75 RHSTSKLANIEDLYKIMSFGFRGEALASISAVSKMEVLTRTKNSLTGLQAFVENGEVK-K 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+P +GT II DLFYN+P R LK + E N I+D + R A+ N + F K N
Sbjct: 134 IRPIGCPKGTTIIVRDLFYNLPVRENFLKSDTVEANNISDTIYRLALGNNGISFKYIKDN 193
Query: 468 ENLADIRTNVNSSHSEVIGNIY 489
+ + +I S ++++I N+Y
Sbjct: 194 KVVFNI-----SKNNDLISNVY 210
>gi|386719273|ref|YP_006185599.1| DNA mismatch repair protein MutL [Stenotrophomonas maltophilia
D457]
gi|384078835|emb|CCH13428.1| DNA mismatch repair protein MutL [Stenotrophomonas maltophilia
D457]
Length = 634
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 44/356 (12%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+ L E ++N+IAAGEV++RPA+ +KEL+EN++DA + + + +++GG++L++I+DN
Sbjct: 6 PRPIRPLPEILINQIAAGEVVERPASVVKELVENAIDAGANRVDIDLEEGGVRLIRIRDN 65
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK------ 117
G+GI E + + R TSK+ +DL S++T GFRGEAL SI+ V+ T+ ++
Sbjct: 66 GSGIAAEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLASRRAHDEH 125
Query: 118 -----------TKTSPCAYRWCTYL-ADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
+ +P A+ T + + + ++L+ ++ ++G EE W R++
Sbjct: 126 GSALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEE--WLRSL 183
Query: 166 EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ----------LKVT 215
P ++ + + K R ++ S + L G D A Q L++
Sbjct: 184 A-LARPDVELRVSHNGKASRRYKPGDLYS--DTRLAETLGEDFANQAVRVDHSGAGLRLH 240
Query: 216 GWITNVNFSTKKM-TFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GWI ++S L++N + ++ Y L G P L L +DP
Sbjct: 241 GWIAQPHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPTR 300
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
VDVNVHP KHEV F L D + ++ L T G + + + + T
Sbjct: 301 VDVNVHPAKHEVRFRDSRLVHDFVYRTLKDALADTRAGMSAQEIGAGAAQPVDATA 356
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ + + +++GG++L++I+DNG+GI E + + R TSK+ +DL S++T GFRGEA
Sbjct: 45 ANRVDIDLEEGGVRLIRIRDNGSGIAAEQLPLAVSRHATSKIADLDDLESVATLGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ T+ ++ K+ + + P A GT + +LFYN+P RR
Sbjct: 105 LPSIASVSRFTLASRRAHDEHGSALQIEGGKIGE-VTPRAHAPGTTVEVRELFYNVPARR 163
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHV 459
K L+ E I + + A+ P V
Sbjct: 164 KFLRAERTELGHIEEWLRSLALARPDV 190
>gi|343510476|ref|ZP_08747702.1| DNA mismatch repair protein [Vibrio scophthalmi LMG 19158]
gi|342801943|gb|EGU37394.1| DNA mismatch repair protein [Vibrio scophthalmi LMG 19158]
Length = 692
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 178/371 (47%), Gaps = 46/371 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENS+D+ +T I + +++GG KL++++DNG G
Sbjct: 3 IKILPARLANQIAAGEVVERPASVVKELVENSIDSGATRIDIDIEKGGAKLIRVRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ T A+
Sbjct: 63 IAKDELGLALSRHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQAWA 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQI----GDKEEKQWYRTVEHTLVPL---------- 172
+ D MA++L+ + L E + +++ RT + +
Sbjct: 123 AHSEGRD-MAVSLLPAAHPLGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELIKRIALS 181
Query: 173 -------------MKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGW 217
M QY+ ++ V+ + NN +L +E LK+ GW
Sbjct: 182 CFDVTINLRHNGKMIKQYRAAKTEVQAEKRIAAVCGNNFVRHMLKIELEHQG--LKLHGW 239
Query: 218 ITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
IT+ + ++ ++N + R I Q Y L F L + +DP VD
Sbjct: 240 ITSPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPEQFATYVLYIEIDPHQVD 299
Query: 271 VNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNT---SRVFYTQSTSIQVTVKQG 323
VNVHP KHEV F L D I + + L ++L S FY S+ + Q
Sbjct: 300 VNVHPAKHEVRFHQARLVHDFIYQALADALAQSLHIDKPEVKSSAFYEPSSDPSRVIAQD 359
Query: 324 GLKLLQIQDNG 334
+ I +G
Sbjct: 360 NGSEMNINHSG 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 6/211 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S +T I + +++GG KL++++DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENSIDS-----GATRIDIDIEKGGAKLIRVRDNGKGIAKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ T A+ A +
Sbjct: 74 RHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQAWAAHSEGRDMAVS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A GT + DLF+N P RRK L+ E+ I +++ R A+ V L+
Sbjct: 134 LLPAAHPLGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELIKRIALSCFDVTINLRHNG 193
Query: 468 ENLADIRTNVNSSHSEV-IGNIYGNNISRRV 497
+ + R +E I + GNN R +
Sbjct: 194 KMIKQYRAAKTEVQAEKRIAAVCGNNFVRHM 224
>gi|445064025|ref|ZP_21376140.1| D mismatch repair protein [Brachyspira hampsonii 30599]
gi|444504596|gb|ELV05243.1| D mismatch repair protein [Brachyspira hampsonii 30599]
Length = 615
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 169/316 (53%), Gaps = 38/316 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGEVI+RPA+ LKELLEN++D+ +++I+V+V++ G+K + ++D+G+G
Sbjct: 5 IIKLPQSVANRIAAGEVIERPASMLKELLENAIDSGASNIEVSVEEAGIKSMIVEDDGSG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
IR ++ + TSK+ EDL+SI T GFRGEALASIS V +L I++K+
Sbjct: 65 IRFNELPLAITHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGK 124
Query: 119 ---------KTSPCAYRWCT-YLADLMALALMEMSQYLQR-DKEQIGDKEEKQWYRTVEH 167
+ P A T +A + + ++L+ +E KE V+
Sbjct: 125 IVVEGGKIIEHKPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 184
Query: 168 TLVPLMK------SQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGWIT 219
+ +K S Y + + ER + S NN+ L+ +E D + + G +
Sbjct: 185 QISMKLKNNGKVVSSYIKVDTLKER--IENYLSDNNVFRNLIEIEIERD--DVSIYGLFS 240
Query: 220 N--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +D +DVN
Sbjct: 241 NSKISQSIRKNNFIFLNNRPIENRVLAYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVN 300
Query: 273 VHPTKHEVHFLHEDTI 288
VHP+K EV +E I
Sbjct: 301 VHPSKKEVRIKNEREI 316
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER SML++ L + +++I+V+V++ G+K + ++D+G+GIR ++ +
Sbjct: 21 VIERPASMLKELL-----ENAIDSGASNIEVSVEEAGIKSMIVEDDGSGIRFNELPLAIT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL+SI T GFRGEALASIS V +L I++K+ + K+ +
Sbjct: 76 HHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGKIVVEGGKIIEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
KP A +QGT+IIA++LF+NIP R K LK S E+ + +V A+ P + LK
Sbjct: 136 -KPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQPQISMKLK 191
>gi|358063955|ref|ZP_09150551.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
gi|356697824|gb|EHI59388.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
Length = 740
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 41/319 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I LDE +N+IAAGEVI+RPA+ +KELLEN++DA++T++ V ++ GG L+++ DNG
Sbjct: 2 PRITVLDEHTINKIAAGEVIERPASVVKELLENAIDAQATAVTVEIRDGGTSLIRVTDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+++ + TSK+ EDL ++++ GFRGEALASI+ VA + +I+KT +
Sbjct: 62 CGIPKDEVGLAFLPHATSKIKSVEDLFTVASLGFRGEALASIAAVAQVELISKTADALTG 121
Query: 125 YRW------------------CTYLADLMALALMEMSQYL---QRDKEQIGDKEEKQWY- 162
R+ T+L + +L Q + + D EK
Sbjct: 122 TRYQIEGGKEKSIEEIGAPEGTTFLVRNLFYNTPARKNFLKTAQTEGAYVADLVEKIALS 181
Query: 163 ------RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
R +++ L S + I+ EIA+ LL VE D Q++ G
Sbjct: 182 HPDISIRFIQNNQNKLHTSGNHNLKDIIYTVFGREIAA----NLLPVEVKQDILQIR--G 235
Query: 217 WI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+ N N+ + +N + + IE+ Y ++ + +PF L L ++P+ +
Sbjct: 236 FAGKPVIARGNRNYENYYINGRYIKSNVVAKAIEEAYKPFMMQHKYPFTLLHLTIEPEYL 295
Query: 270 DVNVHPTKHEVHFLHEDTI 288
DVNVHPTK E+ F + I
Sbjct: 296 DVNVHPTKMELRFREGERI 314
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTG 336
+H ++ + +IER S++++ L Q+T++ V ++ GG L+++ DNG G
Sbjct: 9 EHTINKIAAGEVIERPASVVKELL-----ENAIDAQATAVTVEIRDGGTSLIRVTDNGCG 63
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 396
I K+++ + TSK+ EDL ++++ GFRGEALASI+ VA + +I+KT + R
Sbjct: 64 IPKDEVGLAFLPHATSKIKSVEDLFTVASLGFRGEALASIAAVAQVELISKTADALTGTR 123
Query: 397 ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
K K I+ +GT + +LFYN P R+ LK E +AD+V + A+ +
Sbjct: 124 YQIEGGKEKS-IEEIGAPEGTTFLVRNLFYNTPARKNFLKTAQTEGAYVADLVEKIALSH 182
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
P + + N+N + T+ N + ++I ++G I+
Sbjct: 183 PDISIRFIQNNQN--KLHTSGNHNLKDIIYTVFGREIA 218
>gi|365846262|ref|ZP_09386766.1| DNA mismatch repair protein [Yokenella regensburgei ATCC 43003]
gi|364573980|gb|EHM51453.1| DNA mismatch repair protein [Yokenella regensburgei ATCC 43003]
Length = 618
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 44/335 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGGG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IKKDELALALARHATSKIATLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEE-------KQ 160
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 161 WYRTVEHTLVPLMKSQYQ--PSEKIVERACLLEIASLNNLE-LLSVEGTDDAFQLKVTGW 217
+ T++ + + QY+ P ER L I LE L++E L+ GW
Sbjct: 183 FDVTIQLSHNGKLVRQYRAVPEGGQQERR-LGAICGTPFLEQALAIEWQHGDLTLR--GW 239
Query: 218 ITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
+ + N T +T + ++N + R I Q L P L L +DP V
Sbjct: 240 VADPNHVTPALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLTIDPHQV 299
Query: 270 DVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
DVNVHP KHEV F L D I + V S+L++ L
Sbjct: 300 DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGGGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIATLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+ I +VV R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180
>gi|420260835|ref|ZP_14763504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511673|gb|EKA25539.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 635
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 172/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGASRIDIDIERGGAKLIRIRDNGCGIGKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAAPDPSQHERRLASICG 217
>gi|123440758|ref|YP_001004750.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166232113|sp|A1JIR3.1|MUTL_YERE8 RecName: Full=DNA mismatch repair protein MutL
gi|122087719|emb|CAL10504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 635
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 172/335 (51%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++T
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQT 332
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGASRIDIDIERGGAKLIRIRDNGCGIGKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAAPDPSQHERRLASICG 217
>gi|157963356|ref|YP_001503390.1| DNA mismatch repair protein [Shewanella pealeana ATCC 700345]
gi|189030414|sp|A8H8G8.1|MUTL_SHEPA RecName: Full=DNA mismatch repair protein MutL
gi|157848356|gb|ABV88855.1| DNA mismatch repair protein MutL [Shewanella pealeana ATCC 700345]
Length = 628
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 56/365 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG+G
Sbjct: 3 IEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSKL +DL +I +FGFRGEALASIS V+ L I ++T+
Sbjct: 63 IPKEDLSLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRL--ILTSRTAEQTEA 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEKQWY--- 162
W + MA+ ++ + ++L+ DK + +E W
Sbjct: 121 WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRI 178
Query: 163 ----RTVEHTLVPLMKS--QYQPSE---KIVERACLLEIASLNNLE-LLSVEGTDDAFQL 212
R + TL K+ Y+P+ + ++R L +I E L +E + L
Sbjct: 179 ALARRDIHFTLKHNGKTVRNYRPANTEIQYIQR--LGQICGKAFAETCLRIECEHN--DL 234
Query: 213 KVTGWITNVNFSTK-KMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMD 265
K++G++ + + ++ T ++N + + Q +S Y +G P L L +D
Sbjct: 235 KLSGYLQSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQYA-EGISPGYVLMLELD 293
Query: 266 PKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
P VDVNVHP KHEV F H+ D I++ +QS + ++ S Q+T+ Q +
Sbjct: 294 PHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSAMAQSTQLSVDIEPESEQTTAWQTSP 352
Query: 321 KQGGL 325
+G +
Sbjct: 353 TRGAV 357
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 118/214 (55%), Gaps = 6/214 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG+GI KED+ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIEKGGAKLIRIRDNGSGIPKEDLSLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I +FGFRGEALASIS V+ L + ++T A++A +++
Sbjct: 74 RHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEAWQAHAEGTEMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ + A DLF+N P RR+ LK E+ I + + R A+ + FTLK
Sbjct: 134 VLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALARRDIHFTLKHNG 193
Query: 468 ENLADIR-TNVNSSHSEVIGNIYGNNISRRVRRF 500
+ + + R N + + +G I G + R
Sbjct: 194 KTVRNYRPANTEIQYIQRLGQICGKAFAETCLRI 227
>gi|213583595|ref|ZP_03365421.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 452
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAFQ----------L 212
+ R L NL L ++ GT Q L
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 213 KVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T +T + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|404476564|ref|YP_006707995.1| DNA mismatch repair protein [Brachyspira pilosicoli B2904]
gi|404438053|gb|AFR71247.1| DNA mismatch repair protein [Brachyspira pilosicoli B2904]
Length = 605
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 169/324 (52%), Gaps = 54/324 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGE+I+RPA+ LKELLEN++D+ + +I+V+V++ G+K + ++DNG+G
Sbjct: 5 IMKLPKSVANRIAAGEIIERPASMLKELLENAVDSGADNIEVSVEEAGIKTMIVEDNGSG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I E++ + TSK+ EDL++I T GFRGEALASI V +L I++K+ +
Sbjct: 65 IAFEELPLAITHHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGK 124
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTVEHTLVP 171
+ A ++E Y + +I K +++Y E V
Sbjct: 125 IV-----VEAGKILEHKPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKE---VF 176
Query: 172 LMKSQYQP--SEKIVERACL----LEIASL--------------NNLELLSVEGTDDAFQ 211
M++ QP + K+ L L++ +L +NL L++E D
Sbjct: 177 DMEALVQPNITMKLYNNGKLVNSYLKVDNLKDRIENYLNDSNVFSNLIELNIEKND---- 232
Query: 212 LKVTGWITN--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCM 264
+ + G +N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +
Sbjct: 233 INIYGLFSNSKISQSMRKNNFIFLNNRPIENRVIAYAIKNAYSNSIPKERYPFFFLYINV 292
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTI 288
D VDVNVHP+K EV +E I
Sbjct: 293 DTNKVDVNVHPSKKEVRIKNERDI 316
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER SML++ L + S + +I+V+V++ G+K + ++DNG+GI E++ +
Sbjct: 21 IIERPASMLKELLENAVDS-----GADNIEVSVEEAGIKTMIVEDNGSGIAFEELPLAIT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL++I T GFRGEALASI V +L I++K+ + K+ +
Sbjct: 76 HHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGKIVVEAGKILEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
KP A GT+I A++LF+NIP R K LK S E+ + +V A+ P++ L
Sbjct: 136 -KPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKEVFDMEALVQPNITMKL 190
>gi|385328695|ref|YP_005882998.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
gi|308389547|gb|ADO31867.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
Length = 658
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 164/349 (46%), Gaps = 78/349 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y CT + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPTQSLPERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + T S E I I G++
Sbjct: 184 HIAFSLKRDGKQVFKLPTQ---SLPERIAAIVGDDF 216
>gi|226324942|ref|ZP_03800460.1| hypothetical protein COPCOM_02734 [Coprococcus comes ATCC 27758]
gi|225206290|gb|EEG88644.1| DNA mismatch repair domain protein [Coprococcus comes ATCC 27758]
Length = 356
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 41/331 (12%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ LD+ +++IAAGEVI+RPA+ +KEL+EN++DA ST++ V +++GG+ L++I DNG
Sbjct: 2 PHIELLDQITIDKIAAGEVIERPASVVKELVENAIDAGSTAVTVEIEEGGISLIRITDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI K+D++ R +TSK+ EDL +S+ GFRGEAL+SIS VA + +ITKT+
Sbjct: 62 CGIAKQDVENAFLRHSTSKIRSAEDLTHLSSLGFRGEALSSISAVARVELITKTREDVFG 121
Query: 125 YRW------------------CTYLADLMALALMEMSQYLQ---RDKEQIGD-------K 156
++ T+L + ++L+ + I D
Sbjct: 122 TKYIIEGGKGRTPEETGAPDGTTFLVRQLFFNTPARRKFLKTPMTEASHISDLLTRLALS 181
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
+R + + V L S + ++ EIA NN L+ +E D +L +G
Sbjct: 182 HPDISFRFINNGQVKLHTSGNGKMKDVIYHIYGREIA--NN--LIPLEFEKDGVRL--SG 235
Query: 217 WI-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++ N NF + N+ + + IE Y + + +PFV + ++P+ +
Sbjct: 236 YLGKPVINRGNRNFENYFVNGRYVRNSILAKAIEDGYKDFTMQHRYPFVAFQIEINPEKI 295
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DVNVHP+K E+ F ++ I + + K L
Sbjct: 296 DVNVHPSKMELRFSNQQGIYNLLYEAISKGL 326
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST++ V +++GG+ L++I DNG GI K+D++ R +TSK+ EDL +S+ GFRGEA
Sbjct: 40 STAVTVEIEEGGISLIRITDNGCGIAKQDVENAFLRHSTSKIRSAEDLTHLSSLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SIS VA + +ITKT+ + K + P + A + GT + LF+N P RR
Sbjct: 100 LSSISAVARVELITKTREDVFGTKYIIEGGKGRTPEETGAPD-GTTFLVRQLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK P E + I+D+++R A+ +P + F N + T+ N +VI +IYG
Sbjct: 159 KFLKTPMTEASHISDLLTRLALSHPDISFRF--INNGQVKLHTSGNGKMKDVIYHIYGRE 216
Query: 493 IS 494
I+
Sbjct: 217 IA 218
>gi|409723405|ref|ZP_11270657.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|448722522|ref|ZP_21705056.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|445789247|gb|EMA39936.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
Length = 701
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 46/343 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++LD++ + RIAAGEV++RPA+ +KEL+ENSLDA ++ ++VTV++GG +++ D+GT
Sbjct: 8 EIRRLDQSTIERIAAGEVVERPASVVKELVENSLDADASRVRVTVERGGKDGIRVADDGT 67
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTK----- 119
G+ +E+++ E+ TTSK+ DL + +S+ GFRGEALA+I VA +TI TK +
Sbjct: 68 GMTRENVERAVEKHTTSKIGDISDLEAGVSSLGFRGEALAAIGAVARVTIRTKARGESRG 127
Query: 120 --------------TSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDK--------- 156
+ C ++DL + +YL+RD +
Sbjct: 128 TELRMAGGEVETVEPAGCPEGTTVEVSDLF-YNVPARRKYLKRDATEFAHVNRVATGYAL 186
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELL---SVEGTD--DAFQ 211
+ +EH + + Q S + A +L + E + +G D D
Sbjct: 187 SKPDLALVLEHDDREVFSTTGQGSLE----ATILSVYGREVAEAMVPVDGDGADLPDGPL 242
Query: 212 LKVTGWITNVNFSTKKMTFL-LFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
VTG +++ + FIN ++ + + Y L +PF + L +
Sbjct: 243 DGVTGVVSHPETNRASPEHCSTFINGRYVTARAVRDAVVEAYGGQLAPDRYPFAVVFLSI 302
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
P++VDVNVHP K EV F E E+V+S +E LL + R
Sbjct: 303 SPESVDVNVHPRKLEVRFADESGATEQVKSAVESALLDAGLVR 345
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 9/208 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ ++VTV++GG +++ D+GTG+ +E+++ E
Sbjct: 25 VVERPASVVKELVENS-----LDADASRVRVTVERGGKDGIRVADDGTGMTRENVERAVE 79
Query: 348 RFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKD 406
+ TTSK+ DL + +S+ GFRGEALA+I VA +TI TK + +++
Sbjct: 80 KHTTSKIGDISDLEAGVSSLGFRGEALAAIGAVARVTIRTKARGESRGTELRMAGGEVET 139
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
++P +GT + DLFYN+P RRK LK+ + E+ + V + YA+ P + L+
Sbjct: 140 -VEPAGCPEGTTVEVSDLFYNVPARRKYLKRDATEFAHVNRVATGYALSKPDLALVLEHD 198
Query: 467 NENLADIRTNVNSSHSEVIGNIYGNNIS 494
+ + T S I ++YG ++
Sbjct: 199 DREV--FSTTGQGSLEATILSVYGREVA 224
>gi|365159456|ref|ZP_09355636.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625168|gb|EHL76213.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
Length = 647
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 EIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI +ED + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRVRRFSSAS 504
+++++ + S
Sbjct: 214 IQVAKKLVPIEAES 227
>gi|20455140|sp|Q9CDL1.2|MUTL_LACLA RecName: Full=DNA mismatch repair protein MutL
Length = 656
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSLP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 301 PTKQEVRLSKERELMALISKAIDEAL 326
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSTAEEESGTKLVAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 217 TAKKMRQIKGS 227
>gi|385831794|ref|YP_005869607.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
gi|326407802|gb|ADZ64873.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
Length = 656
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSIP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 301 PTKQEVRLSKERELMALISKAIDEAL 326
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSTAEEESGTKLIAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 217 TAKKMRQIKGS 227
>gi|420716901|ref|ZP_15196723.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-58]
gi|391607451|gb|EIS50050.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-58]
Length = 314
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 55/320 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 292 DIDPHQVDVNVHPAKHEVRF 311
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|300871537|ref|YP_003786410.1| DNA mismatch repair protein [Brachyspira pilosicoli 95/1000]
gi|300689238|gb|ADK31909.1| DNA mismatch repair protein [Brachyspira pilosicoli 95/1000]
Length = 605
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 169/324 (52%), Gaps = 54/324 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGE+I+RPA+ LKELLEN++D+ + +I+V+V++ G+K + ++DNG+G
Sbjct: 5 IMKLPKSVANRIAAGEIIERPASMLKELLENAVDSGADNIEVSVEEAGIKTMIVEDNGSG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I E++ + TSK+ EDL++I T GFRGEALASI V +L I++K+ +
Sbjct: 65 IAFEELPLAITHHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGK 124
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTVEHTLVP 171
+ A ++E Y + +I K +++Y E V
Sbjct: 125 IV-----VEAGKILEHKPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKE---VF 176
Query: 172 LMKSQYQP--SEKIVERACL----LEIASL--------------NNLELLSVEGTDDAFQ 211
M++ QP + K+ L L++ +L +NL L++E D
Sbjct: 177 DMEALVQPNITMKLYNNGKLVNSYLKVDNLKDRIENYLNDSNIFSNLIELNIEKND---- 232
Query: 212 LKVTGWITN--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCM 264
+ + G +N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +
Sbjct: 233 INIYGLFSNSKISQSMRKNNFIFLNNRPIENRVIAYAIKNAYSNSIPKERYPFFFLYINV 292
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTI 288
D VDVNVHP+K EV +E I
Sbjct: 293 DTNKVDVNVHPSKKEVRIKNERDI 316
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER SML++ L + S + +I+V+V++ G+K + ++DNG+GI E++ +
Sbjct: 21 IIERPASMLKELLENAVDS-----GADNIEVSVEEAGIKTMIVEDNGSGIAFEELPLAIT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL++I T GFRGEALASI V +L I++K+ + K+ +
Sbjct: 76 HHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGKIVVEAGKILEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
KP A GT+I A++LF+NIP R K LK S E+ + +V A+ P++ L
Sbjct: 136 -KPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKEVFDMEALVQPNITMKL 190
>gi|34496797|ref|NP_901012.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
gi|34102652|gb|AAQ59017.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
Length = 631
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 170/348 (48%), Gaps = 34/348 (9%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I++L + +VN+IAAGEV++RPA+ALKE+LENSLDA +T I V + QGG+KL+++ DNG
Sbjct: 3 RIQRLPDHLVNQIAAGEVVERPASALKEMLENSLDAGATRISVDLAQGGIKLIRVTDNGA 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + +R TSK+ +DL S+ST GFRGE LAS++ V+ LT+ ++ + A+
Sbjct: 63 GIAADDLPLALDRHATSKIASLDDLESVSTLGFRGEGLASVASVSRLTLTSRPHDADHAH 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYR---------T 164
+ L +E + + ++ D K E Y
Sbjct: 123 QIIAIDGTLHP---VEPAAHPHGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIA 179
Query: 165 VEHTLVP-LMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDD--AFQLKVTGWITNV 221
+ H V L++ + + ++ ++ +A+L + ++ D A L ++G++ +
Sbjct: 180 LAHPEVEFLLRHNGKVAWRLPSQSAEDRVAALLGKDFVAAAIPLDSQAGPLALSGFVASP 239
Query: 222 NFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+S + ++N R + Q Y L P L ++P VDVNVH
Sbjct: 240 TYSKASRDAQYFYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFFTLEPSGVDVNVH 299
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQ 322
PTK EV F + + + + K L G++ Q + Q
Sbjct: 300 PTKIEVRFRESQAVHQFLFHSVHKALAGTSAGAAPTVQVEGAETAAPQ 347
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER S L++ L S +T I V + QGG+KL+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPASALKEMLENS-----LDAGATRISVDLAQGGIKLIRVTDNGAGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + +R TSK+ +DL S+ST GFRGE LAS++ V+ LT+ ++ + A++
Sbjct: 65 AADDLPLALDRHATSKIASLDDLESVSTLGFRGEGLASVASVSRLTLTSRPHDADHAHQI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
ID L P++P A GT + DL++N P RRK LK + EY A R A+ +P
Sbjct: 125 IAIDGTLH-PVEPAAHPHGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIALAHP 183
Query: 458 HVGFTLK 464
V F L+
Sbjct: 184 EVEFLLR 190
>gi|24372192|ref|NP_716234.1| DNA mismatch repair protein MutL [Shewanella oneidensis MR-1]
gi|81845917|sp|Q8EJ70.1|MUTL_SHEON RecName: Full=DNA mismatch repair protein MutL
gi|24346101|gb|AAN53679.1|AE015507_5 DNA mismatch repair protein MutL [Shewanella oneidensis MR-1]
Length = 631
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 175/336 (52%), Gaps = 51/336 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + + +GG KL++I+DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEKQWYR-- 163
W Y + MA+ +M + ++L+ DK + +E W +
Sbjct: 121 WQAYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRI 178
Query: 164 -----TVEHTLVPLMKS--QYQPS---EKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
+ TL K+ Y+P+ + ++R + + E L VE D L+
Sbjct: 179 ALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFAD-EALRVECQHD--DLR 235
Query: 214 VTGWITNVNFSTKKMTFLLFINNPIKR---MIEQVYSIYLPKGSF--PFVYLSLCMDPKN 268
++G++ + + T ++N + R + V + K P L L +DP
Sbjct: 236 LSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDIDPHQ 295
Query: 269 VDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKT 299
VDVNVHP KHEV F H+ D I++ +QS LE+
Sbjct: 296 VDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEEA 330
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 16/216 (7%)
Query: 288 IIERVQSMLEKTL---LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ER S++++ + L + SR I + + +GG KL++I+DNG+GI KE++ +
Sbjct: 19 VVERPASVVKELVENSLDAGASR--------IDIEIDKGGSKLIKIRDNGSGIPKEELAL 70
Query: 345 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKL 404
R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A++A ++
Sbjct: 71 ALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGVEM 130
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ P A G+ I DLF+N P RR+ LK E+ I + + R A+ + FTL
Sbjct: 131 AVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRGDIHFTLT 190
Query: 465 KQNENLADIRTNVNSSH-----SEVIGNIYGNNISR 495
+ + + R +N ++V G + + R
Sbjct: 191 HNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALR 226
>gi|417958724|ref|ZP_12601637.1| DNA mismatch repair protein mutL [Neisseria weaveri ATCC 51223]
gi|343966536|gb|EGV34792.1| DNA mismatch repair protein mutL [Neisseria weaveri ATCC 51223]
Length = 660
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 170/363 (46%), Gaps = 81/363 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELAGGGIRLIRVTDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA- 124
GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++T++S A
Sbjct: 63 GIHADDISLALHRHATSKIKSLTDLEHVASMGFRGEGLASIASVSRLTLTSRTESSAHAN 122
Query: 125 ---------------------------------------------YRWCTYLADLMALAL 139
Y C + + +ALA
Sbjct: 123 QVKAEDGKLSESGAAAHPVGTTVEVAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD + I K +++ + ++ +Q + +LE
Sbjct: 183 PHIAFSLKRDGKSIF----KLPAQSLRERVAAIVGDDFQTA----------------SLE 222
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
+ S EG +++ G+I F+ K F+N R ++Q Y L
Sbjct: 223 IDSGEGI-----MRLHGFIAKPTFAKGKTDKQYCFVNRRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P L L + P+ VDVNVHPTK E+ F + + V L K L G +R T+
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQAVHQLVFHTLNKALAG---TRADQTE 334
Query: 313 STS 315
S S
Sbjct: 335 SVS 337
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ V + GG++L+++ DNG+GI +D+ + R TSK+ DL +++ GFRGE
Sbjct: 40 ATAVDVELAGGGIRLIRVTDNGSGIHADDISLALHRHATSKIKSLTDLEHVASMGFRGEG 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ ++T++S A + D KL + A GT + +LF+N P RR
Sbjct: 100 LASIASVSRLTLTSRTESSAHANQVKAEDGKLSES-GAAAHPVGTTVEVAELFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
K LK + EY A ++ R A+ +PH+ F+LK+ +++
Sbjct: 159 KFLKSENTEYAHCATMLERLALAHPHIAFSLKRDGKSI 196
>gi|441506449|ref|ZP_20988420.1| DNA mismatch repair protein MutL [Photobacterium sp. AK15]
gi|441425915|gb|ELR63406.1| DNA mismatch repair protein MutL [Photobacterium sp. AK15]
Length = 725
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 41/334 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG + ++I+DNG G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDKGGSRTIRIRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
I K+++ + R TSK++ +DL +I + GFRGEALASIS V+ LT+ +KT
Sbjct: 63 ISKDELGLALSRHATSKISTLDDLEAIMSLGFRGEALASISSVSRLTLTSKTAEQEEAWS 122
Query: 119 ----------KTSPCAYRWCTYLADL-MALALMEMSQYLQRDKEQIGDKEE-------KQ 160
K P A+ T L L + ++L+ +K + G +E +
Sbjct: 123 AYAEGRDMDVKLKPAAHPVGTTLEVLDLFFNTPARRKFLRTEKTEFGHIDELLKRIALSR 182
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGWI 218
+ T+ + QY+ ++ V++ L +N L+VE LK++GWI
Sbjct: 183 FDVTINLRHNGKVIRQYRAAQTQVQKERRLAAVCGSNFLNHALAVELAHG--DLKLSGWI 240
Query: 219 TNVNFSTKKMTF-LLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ + + ++N I I Q Y L + L + +DP VDV
Sbjct: 241 CSPQGARAQNDIQYCYVNGRMMKDKLINHAIRQAYETSLNPDQYAAYVLFIEVDPHQVDV 300
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSMLEKTLL 301
NVHP KHEV F L D I++ +QS L+++ L
Sbjct: 301 NVHPAKHEVRFHQARLVHDFILQGLQSALQQSQL 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + + +GG + ++I+DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIDKGGSRTIRIRDNGKGISKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ +DL +I + GFRGEALASIS V+ LT+ +KT A+ A +
Sbjct: 74 RHATSKISTLDDLEAIMSLGFRGEALASISSVSRLTLTSKTAEQEEAWSAYAEGRDMDVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+KP A GT + DLF+N P RRK L+ E+ I +++ R A+ V L+
Sbjct: 134 LKPAAHPVGTTLEVLDLFFNTPARRKFLRTEKTEFGHIDELLKRIALSRFDVTINLR 190
>gi|383787509|ref|YP_005472078.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
gi|383110356|gb|AFG35959.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
Length = 616
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 173/325 (53%), Gaps = 25/325 (7%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M+ +I KL E VV++IAAGEV+ PA+ +KEL+ENS+DA +++I+V +K GG +++
Sbjct: 1 MNDGRRIIKLPEEVVSKIAAGEVVVNPASVVKELVENSIDAGASNIEVQIKDGGKSYIKV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG+G+ KED+ + +R+TTSK++ ED+ +I+++GFRGEALASI V+ L I T
Sbjct: 61 SDNGSGMSKEDLLLAVQRYTTSKISSIEDIYNITSYGFRGEALASIGEVSRLVITTSNGN 120
Query: 121 SPCAYRWCTYLADLMALALMEMSQYLQ----------RDKEQIGDKEEKQWY-RTVEHTL 169
++ L E ++ R K +K E++ +E L
Sbjct: 121 ESNKLEMVGGKVVRVSETLRERGTTVEVFDLFFNIPARRKFLSSEKIERRMVTEVIERFL 180
Query: 170 V--PLMKSQYQPSEKIVERAC---LLEIASLNNLELLSVEGTDDAFQ--LKVTGWITNVN 222
+ P +K ++ +I+ A LLE L E+ S E +D ++V+G I++
Sbjct: 181 LTKPEIKFLFKVDNEIIYNAPSSNLLERFKLIFPEVKSFEIIEDCKDGIIRVSGIISSPQ 240
Query: 223 FSTKKMTFLLF-------INNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
F K + LF ++N + +E+ Y L +G+ PF + + + P+ VDVN+HP
Sbjct: 241 FFRKNRSGQLFFVNGRFVLDNLLHIALERGYGEALIEGTHPFAVIFIEVSPREVDVNIHP 300
Query: 276 TKHEVHFLHEDTIIERVQSMLEKTL 300
K +V F + + + + TL
Sbjct: 301 QKLQVKFSEPRMVYDAIARCVRDTL 325
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 13/161 (8%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+++I+V +K GG +++ DNG+G+ KED+ + +R+TTSK++ ED+ +I+++GFRGEA
Sbjct: 43 ASNIEVQIKDGGKSYIKVSDNGSGMSKEDLLLAVQRYTTSKISSIEDIYNITSYGFRGEA 102
Query: 373 LASISHVAHLTIIT-----KTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYN 427
LASI V+ L I T K + + L++ +GT + DLF+N
Sbjct: 103 LASIGEVSRLVITTSNGNESNKLEMVGGKVVRVSETLRE--------RGTTVEVFDLFFN 154
Query: 428 IPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNE 468
IP RRK L E + +V+ R+ + P + F K NE
Sbjct: 155 IPARRKFLSSEKIERRMVTEVIERFLLTKPEIKFLFKVDNE 195
>gi|289207679|ref|YP_003459745.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. K90mix]
gi|288943310|gb|ADC71009.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. K90mix]
Length = 626
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 161/332 (48%), Gaps = 46/332 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL E ++N+IAAGEV++RPA+ +KEL+EN+LDA ST I+V ++QGG++L+QI DNG G
Sbjct: 3 IEKLSEQLINQIAAGEVVERPASVVKELVENALDAGSTRIEVRLEQGGIRLIQISDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++++ + R TSK+ EDL ++ T GFRGEAL SI+ V+ L++ + + +R
Sbjct: 63 IHRDELPLALSRHATSKIRSMEDLEALHTLGFRGEALPSIASVSRLSMTSAVEGERNGWR 122
Query: 127 WCTYLADLM---ALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKI 183
+D+ A A + ++ +++ RT ++++ E +
Sbjct: 123 LTGDGSDVFREAAPAAHPVGTTVEVRDLFFNVPARRKFVRT--------ERTEFNHCETV 174
Query: 184 V--ERACLLEIA---SLNNLELLSVEGTDDAFQ-----------------------LKVT 215
+ + A E+A N+ +L + D Q LK++
Sbjct: 175 IRTQAAACPEVAFTLRHNDRVVLDLPAAADPAQRVRALLGEAFMGAATPVGEQRAGLKLS 234
Query: 216 GWITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ S + F+N R + + Y L G P L L +DP
Sbjct: 235 GWLGAPTQSRAQPDQQFFFVNGRAIRDRVLAAAVRKAYQDVLYHGRHPMFVLELELDPVQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VDVN HPTK EV F + + + L K L
Sbjct: 295 VDVNAHPTKQEVRFRESRMVHDFIFHALHKAL 326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + ST I+V ++QGG++L+QI DNG GI ++++ +
Sbjct: 19 VVERPASVVKELV-----ENALDAGSTRIEVRLEQGGIRLIQISDNGCGIHRDELPLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL ++ T GFRGEAL SI+ V+ L++ + + +R + S +
Sbjct: 74 RHATSKIRSMEDLEALHTLGFRGEALPSIASVSRLSMTSAVEGERNGWRLTGDGSDVFRE 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
P A GT + DLF+N+P RRK ++ E+N V+ A P V FTL+ +
Sbjct: 134 AAPAAHPVGTTVEVRDLFFNVPARRKFVRTERTEFNHCETVIRTQAAACPEVAFTLRHND 193
Query: 468 ENLADI 473
+ D+
Sbjct: 194 RVVLDL 199
>gi|281492891|ref|YP_003354871.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
gi|281376543|gb|ADA66029.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
Length = 656
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 123 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 183 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSIP 240
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 241 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 301 PTKQEVRLSKERELMALISKAIDEAL 326
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 40 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 100 LPSIASVSQMTIETSTAEEESGTKLIAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 159 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 216
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 217 TAKKMRQIKGS 227
>gi|420711531|ref|ZP_15191967.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-56]
gi|391592763|gb|EIS37147.1| DNA mismatch repair protein mutL, partial [Yersinia pestis PY-56]
Length = 316
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 55/320 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 292 DIDPHQVDVNVHPAKHEVRF 311
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|418038830|ref|ZP_12677146.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354692837|gb|EHE92642.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 695
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 42 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 101
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 102 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 161
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 162 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 221
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 222 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSIP 279
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 280 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 339
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 340 PTKQEVRLSKERELMALISKAIDEAL 365
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 79 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 139 LPSIASVSQMTIETSTAEEESGTKLIAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 197
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 198 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 255
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 256 TAKKMRQIKGS 266
>gi|343516365|ref|ZP_08753403.1| DNA mismatch repair protein [Vibrio sp. N418]
gi|342796376|gb|EGU32061.1| DNA mismatch repair protein [Vibrio sp. N418]
Length = 692
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 43/334 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENS+D+ +T I + +++GG KL++++DNG G
Sbjct: 3 IKILPARLANQIAAGEVVERPASVVKELVENSIDSGATRIDIDIEKGGAKLIRVRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ T A+
Sbjct: 63 IAKDELGLALSRHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQAWA 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQI----GDKEEKQWYRTVEHTLVPL---------- 172
+ D MA++L+ + L E + +++ RT + +
Sbjct: 123 AHSEGRD-MAVSLLPAAHPLGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELIKRIALS 181
Query: 173 -------------MKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQLKVTGW 217
M QY+ ++ V+ + NN +L +E LK+ GW
Sbjct: 182 CFDVTINLRHNGKMIKQYRAAKTEVQAEKRIAAVCGNNFVRHMLKIELEHQG--LKLHGW 239
Query: 218 ITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
IT+ + ++ ++N + R I Q Y L F L + +DP VD
Sbjct: 240 ITSPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPEQFATYVLYIEIDPHQVD 299
Query: 271 VNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
VNVHP KHEV F L D I + + L ++L
Sbjct: 300 VNVHPAKHEVRFHQARLVHDFIYQALADALAQSL 333
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 6/211 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S +T I + +++GG KL++++DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENSIDS-----GATRIDIDIEKGGAKLIRVRDNGKGIAKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ T A+ A +
Sbjct: 74 RHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQAWAAHSEGRDMAVS 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A GT + DLF+N P RRK L+ E+ I +++ R A+ V L+
Sbjct: 134 LLPAAHPLGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELIKRIALSCFDVTINLRHNG 193
Query: 468 ENLADIRTNVNSSHSEV-IGNIYGNNISRRV 497
+ + R +E I + GNN R +
Sbjct: 194 KMIKQYRAAKTEVQAEKRIAAVCGNNFVRHM 224
>gi|421540697|ref|ZP_15986839.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93004]
gi|402318247|gb|EJU53771.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93004]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ E+ + + ++ +Q + +L
Sbjct: 182 HPHIAFSLKRDGKQVFKLPEQSLHERI----AAIVGDDFQTA----------------SL 221
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
E+ S G L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 222 EIDSGSGA-----LRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENL 470
H+ F+LK+ + +
Sbjct: 184 HIAFSLKRDGKQV 196
>gi|384209368|ref|YP_005595088.1| D mismatch repair protein [Brachyspira intermedia PWS/A]
gi|343387018|gb|AEM22508.1| D mismatch repair protein [Brachyspira intermedia PWS/A]
Length = 625
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 166/316 (52%), Gaps = 38/316 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGEVI+RPA+ LKELLEN++D+ +++I+V+V++ G+K + ++D+G G
Sbjct: 11 IIKLPQSVANRIAAGEVIERPASMLKELLENAIDSGASNIEVSVEEAGIKSMIVEDDGNG 70
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
IR ++ + TSK+ EDL+SI T GFRGEALASIS V +L I++K+
Sbjct: 71 IRFNELPLAITHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGK 130
Query: 119 ---------KTSPCAYRWCT-YLADLMALALMEMSQYLQR-DKEQIGDKEEKQWYRTVEH 167
+ P A T +A + + ++L+ +E KE V+
Sbjct: 131 IVVEGGKIIEHKPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 190
Query: 168 TLVPLMK------SQYQPSEKIVERA--CLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
+ +K S Y + + ER L + NL + +E D + + G +
Sbjct: 191 KISMKLKNNGKVVSSYIKVDTLKERIENYLSDSNVFRNLIEVEIEKDD----VSIYGLFS 246
Query: 220 N--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +D +DVN
Sbjct: 247 NSKISQSMRKNNFIFLNNRPIENRVLAYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVN 306
Query: 273 VHPTKHEVHFLHEDTI 288
VHP+K EV +E I
Sbjct: 307 VHPSKKEVRIKNEREI 322
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER SML++ L + S +++I+V+V++ G+K + ++D+G GIR ++ +
Sbjct: 27 VIERPASMLKELLENAIDS-----GASNIEVSVEEAGIKSMIVEDDGNGIRFNELPLAIT 81
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL+SI T GFRGEALASIS V +L I++K+ + K+ +
Sbjct: 82 HHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGKIVVEGGKIIEH 141
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
KP A +QGT+IIA++LF+NIP R K LK S E+ + +V A+ P + LK
Sbjct: 142 -KPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQPKISMKLK 197
>gi|238750069|ref|ZP_04611572.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
gi|238711613|gb|EEQ03828.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
Length = 632
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 170/335 (50%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAQQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQQALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQA 332
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAQQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAATDPSQHERRLASICG 217
>gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
Length = 660
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 170/337 (50%), Gaps = 51/337 (15%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +IKKL + VV++IAAGEVI+RPA+ +KEL+ENS+DA S I++ V GG L+Q+ D
Sbjct: 2 PKQIKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKIEIKVNNGGKDLIQVIDT 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI--------- 114
G G+ +ED ++ ER TSK+T+ DL SI + GFRGEAL SI+ ++ LT+
Sbjct: 62 GYGMTREDAELALERHATSKITEANDLFSIRSLGFRGEALPSIAAISRLTMKTRTEDKLG 121
Query: 115 ----------ITKTKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
I K + + C + DL + +YL+ +I ++
Sbjct: 122 GTLVKINGGEIKKIEDAGCPIGTNIIVKDLFYNTPVRY-KYLKTSATEI-----RRISDI 175
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAFQL---------- 212
V + + ++ S + +LE NL +LSV G + A +
Sbjct: 176 VNRLALAYPEITFKLSHN---QKKVLETPGNGNLMDTILSVYGKEVAKSMIAVDYEDKYM 232
Query: 213 KVTGWITNVNFS---TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
+V+G+++ N S K +F FIN + I + Y L KG P L++
Sbjct: 233 QVSGYVSKPNISRASKKHQSF--FINRRYIKSRALSEAISKAYHTLLAKGRHPIAILTIK 290
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
++P VDVNVHPTK EV+F E + +Q+ +++ L
Sbjct: 291 LNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEAL 327
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S S I++ V GG L+Q+ D G G+ +ED ++ E
Sbjct: 21 VIERPASVVKELVENS-----IDADSDKIEIKVNNGGKDLIQVIDTGYGMTREDAELALE 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+T+ DL SI + GFRGEAL SI+ ++ LT+ T+T+ ++K
Sbjct: 76 RHATSKITEANDLFSIRSLGFRGEALPSIAAISRLTMKTRTEDKLGGTLVKINGGEIK-K 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
I+ GT II +DLFYN P R K LK + E +I+D+V+R A+ P + F L
Sbjct: 135 IEDAGCPIGTNIIVKDLFYNTPVRYKYLKTSATEIRRISDIVNRLALAYPEITFKLSHNQ 194
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
+ + + T N + + I ++YG +++
Sbjct: 195 KKV--LETPGNGNLMDTILSVYGKEVAK 220
>gi|424669519|ref|ZP_18106544.1| DNA mismatch repair protein mutL [Stenotrophomonas maltophilia
Ab55555]
gi|401071590|gb|EJP80101.1| DNA mismatch repair protein mutL [Stenotrophomonas maltophilia
Ab55555]
gi|456736768|gb|EMF61494.1| DNA mismatch repair protein MutL [Stenotrophomonas maltophilia
EPM1]
Length = 634
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 40/314 (12%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+ L E ++N+IAAGEV++RPA+ +KEL+EN++DA ++ + + +++GG++L++I+DN
Sbjct: 6 PRPIRPLPEILINQIAAGEVVERPASVVKELVENAIDAGASRVDIDLEEGGVRLIRIRDN 65
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK------ 117
G+GI E + + R TSK+ +DL S++T GFRGEAL SI+ V+ T+ ++
Sbjct: 66 GSGIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLSSRRAHDEH 125
Query: 118 -----------TKTSPCAYRWCTYL-ADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
+ +P A+ T + + + ++L+ ++ ++G EE W R++
Sbjct: 126 GSALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEE--WLRSL 183
Query: 166 EHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQ----------LKVT 215
P ++ + + K R ++ S + L G D A Q L++
Sbjct: 184 A-LARPDVELRVSHNGKASRRYKPGDLYS--DARLAETLGEDFANQAVRVDHSGAGLRLH 240
Query: 216 GWITNVNFSTKKM-TFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GWI ++S L++N + ++ Y L G P L L +DP
Sbjct: 241 GWIAQPHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPTR 300
Query: 269 VDVNVHPTKHEVHF 282
VDVNVHP KHEV F
Sbjct: 301 VDVNVHPAKHEVRF 314
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ + + +++GG++L++I+DNG+GI E + + R TSK+ +DL S++T GFRGEA
Sbjct: 45 ASRVDIDLEEGGVRLIRIRDNGSGIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ T+ ++ K+ + + P A GT + +LFYN+P RR
Sbjct: 105 LPSIASVSRFTLSSRRAHDEHGSALQIEGGKIGE-VTPRAHAPGTTVEVRELFYNVPARR 163
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHV 459
K L+ E I + + A+ P V
Sbjct: 164 KFLRAERTELGHIEEWLRSLALARPDV 190
>gi|302406813|ref|XP_003001242.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102]
gi|261359749|gb|EEY22177.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102]
Length = 628
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 98/146 (67%), Gaps = 9/146 (6%)
Query: 366 FGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKP--------CAGNQGT 417
+ FRGEALASISH+AHL++ TKTK S A+RA ++D KL P KP AG GT
Sbjct: 38 YSFRGEALASISHIAHLSVTTKTKDSAVAWRAHFLDGKLA-PAKPGQSAEPKKVAGRDGT 96
Query: 418 QIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
QI EDLF+NIPTRR+A + PSEEYNKI D+V RYA+H V F+ KKQ E+ A +
Sbjct: 97 QISVEDLFFNIPTRRRAFRSPSEEYNKIIDMVGRYAIHCQGVAFSCKKQGESGASVSVQA 156
Query: 478 NSSHSEVIGNIYGNNISRRVRRFSSA 503
++S ++ + IYG+++ + F+++
Sbjct: 157 SASTTDRVRQIYGSSVGNELIEFATS 182
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 62/260 (23%)
Query: 96 FGFRGEALASISHVAHLTIITKTKTSPCAYRWCTYLADLMALA----LMEMSQYLQRDKE 151
+ FRGEALASISH+AHL++ TKTK S A+R +L +A A E + RD
Sbjct: 38 YSFRGEALASISHIAHLSVTTKTKDSAVAWR-AHFLDGKLAPAKPGQSAEPKKVAGRDGT 96
Query: 152 QIGDKE-------EKQWYRTV--EHTLVPLMKSQY-----------------------QP 179
QI ++ ++ +R+ E+ + M +Y Q
Sbjct: 97 QISVEDLFFNIPTRRRAFRSPSEEYNKIIDMVGRYAIHCQGVAFSCKKQGESGASVSVQA 156
Query: 180 SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN--- 236
S +R + +S+ N EL+ +DD + K G +TN N+ KK TFLLFIN+
Sbjct: 157 SASTTDRVRQIYGSSVGN-ELIEFATSDDRWAFKADGLVTNANYHIKKTTFLLFINHRCV 215
Query: 237 ---PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQ 293
I++ IEQVY+ +LPK PF+YLSL +DP VDVNV + E+V+
Sbjct: 216 ESTTIRKAIEQVYATFLPKNGRPFIYLSLEIDPARVDVNV--------------VCEQVR 261
Query: 294 SMLEKTLLGSNTSRVFYTQS 313
+ L + +TSR F TQ+
Sbjct: 262 TKLAEV----DTSRTFMTQT 277
>gi|420803463|ref|ZP_15273025.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-93]
gi|391686702|gb|EIT20097.1| DNA mismatch repair MutL family protein, partial [Yersinia pestis
PY-93]
Length = 312
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 55/320 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
V R L NL L S+ G AF
Sbjct: 175 VRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGP--AFLQHALAIAWQHG 232
Query: 211 QLKVTGWITN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + + + +M + ++NN + R I Q Y L P L L
Sbjct: 233 DLNIHGWVADPAASHTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 292 DIDPHQVDVNVHPAKHEVRF 311
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNG 193
Query: 468 ENLADIRTNVN-SSHSEVIGNIYG 490
+ + R + + H + +I G
Sbjct: 194 KLIRQYRAAPDPAQHERRLASICG 217
>gi|418288609|ref|ZP_12901072.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM233]
gi|372201519|gb|EHP15437.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM233]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ E+ + + ++ +Q + +L
Sbjct: 182 HPHIAFSLKRDGKQVFKLPEQSLHERI----AAIVGDDFQTA----------------SL 221
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
E+ S G L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 222 EIDSGSGA-----LRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENL 470
H+ F+LK+ + +
Sbjct: 184 HIAFSLKRDGKQV 196
>gi|421563641|ref|ZP_16009457.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2795]
gi|402340126|gb|EJU75329.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2795]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPIGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGEDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHALNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPIGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAHP 183
Query: 458 HVGFTLKKQNENL 470
H+ F+LK+ + +
Sbjct: 184 HIAFSLKRDGKQV 196
>gi|421907159|ref|ZP_16337044.1| DNA mismatch repair protein mutL [Neisseria meningitidis alpha704]
gi|393291676|emb|CCI73030.1| DNA mismatch repair protein mutL [Neisseria meningitidis alpha704]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPIGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGEDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHALNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPIGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G +
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGEDF 216
>gi|359438531|ref|ZP_09228549.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20311]
gi|359445816|ref|ZP_09235530.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20439]
gi|358026807|dbj|GAA64798.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20311]
gi|358040219|dbj|GAA71779.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20439]
Length = 608
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 177/352 (50%), Gaps = 47/352 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K + A++
Sbjct: 63 IAKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPEQQEAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAQGRD-MAVEVKPVAHPSGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 176 QYQPS------EKIVER--------ACLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V + + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAQAITRVAQVAGKAFAEQGLHIQSGESGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + + P + + +DP+ VDV
Sbjct: 240 VLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGEQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSM---LEKTLLGSNTSRVFYTQSTSI 316
NVHP KHEV F L D I++ ++ + L+ + S + ++ TS
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVVVPLQAEFVNSPAAHTHHSPVTSF 349
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI KE++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGSGIAKEELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K + A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPEQQEAAWQAFAQGRDMAVEVKPVAHPSGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +++ R A+ V TL
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITL 189
>gi|15674190|ref|NP_268365.1| DNA mismatch repair protein [Lactococcus lactis subsp. lactis
Il1403]
gi|12725273|gb|AAK06306.1|AE006449_12 DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
Il1403]
Length = 695
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 42 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 101
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 102 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 161
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 162 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 221
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 222 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSLP 279
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 280 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 339
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 340 PTKQEVRLSKERELMALISKAIDEAL 365
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 79 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 139 LPSIASVSQMTIETSTAEEESGTKLVAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 197
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 198 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 255
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 256 TAKKMRQIKGS 266
>gi|194098697|ref|YP_002001759.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945]
gi|254493793|ref|ZP_05106964.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268594850|ref|ZP_06129017.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02]
gi|268596770|ref|ZP_06130937.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19]
gi|268599068|ref|ZP_06133235.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|385335752|ref|YP_005889699.1| DNA mismatch repair protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|238690209|sp|B4RLX4.1|MUTL_NEIG2 RecName: Full=DNA mismatch repair protein MutL
gi|193933987|gb|ACF29811.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945]
gi|226512833|gb|EEH62178.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268548239|gb|EEZ43657.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02]
gi|268550558|gb|EEZ45577.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19]
gi|268583199|gb|EEZ47875.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|317164295|gb|ADV07836.1| DNA mismatch repair protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + PK VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|423142838|ref|ZP_17130476.1| DNA mismatch repair protein [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379049429|gb|EHY67324.1| DNA mismatch repair protein [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 618
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIMSLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVARDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDNLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIMSLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|238764690|ref|ZP_04625634.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
gi|238697086|gb|EEP89859.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
Length = 631
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 170/335 (50%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 IGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHGD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++NN + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQA 332
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + + +GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIDRGGAKLIRIRDNGCGIGKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAATDPSQHERRLASICG 217
>gi|385341654|ref|YP_005895525.1| DNA mismatch repair protein MutL [Neisseria meningitidis
M01-240149]
gi|385857499|ref|YP_005904011.1| DNA mismatch repair protein MutL [Neisseria meningitidis NZ-05/33]
gi|325201860|gb|ADY97314.1| DNA mismatch repair protein MutL [Neisseria meningitidis
M01-240149]
gi|325208388|gb|ADZ03840.1| DNA mismatch repair protein MutL [Neisseria meningitidis NZ-05/33]
Length = 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y CT + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPTQSLPERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + T S E I I G++
Sbjct: 184 HIAFSLKRDGKQVFKLPTQ---SLPERIAAIVGDDF 216
>gi|374674287|dbj|BAL52178.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
IO-1]
Length = 695
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 33/326 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L+E + N+IAAGEV++RPA+ +KEL+ENS+DA S+ I + V++ GL+L+++ DNG
Sbjct: 42 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 101
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT----- 120
G+ KED+ + R TSK+ DL I T GFRGEAL SI+ V+ +TI T T
Sbjct: 102 GLEKEDVALALRRHATSKIKYSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 161
Query: 121 ------------SPCAYRWCTYL--ADLM--ALALMEMSQYLQRDKEQIGD--KEEKQWY 162
P A R T + A+L A ++ + LQ + I D +
Sbjct: 162 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 221
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL-ELLSVEGTDDAFQLKVTGWIT-- 219
+ TLV K + + R + I + ++ ++G+D F+L TG+++
Sbjct: 222 PEISFTLVNEGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFEL--TGYVSIP 279
Query: 220 -----NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
N N+ T + N + R I + Y L G FPF LS+ +DP DVNVH
Sbjct: 280 ELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNVH 339
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTL 300
PTK EV E ++ + +++ L
Sbjct: 340 PTKQEVRLSKERELMALISKAIDEAL 365
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+ I + V++ GL+L+++ DNG G+ KED+ + R TSK+ DL I T GFRGEA
Sbjct: 79 SSKIIINVEEAGLRLIEVIDNGLGLEKEDVALALRRHATSKIKYSADLFRIRTLGFRGEA 138
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ +TI T T + + + ++P A GT+I +LFYN P R
Sbjct: 139 LPSIASVSQMTIETSTAEEESGTKLIAKGGNI-ETLEPLAKRVGTKISVANLFYNTPARL 197
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K +K E + I D+++R ++ +P + FTL NE ++T N +VI IYG
Sbjct: 198 KYIKSLQAELSHITDIINRLSLAHPEISFTL--VNEGKEFLKTAGNGDLRQVIAAIYGIG 255
Query: 493 ISRRVRRFSSA 503
++++R+ +
Sbjct: 256 TAKKMRQIKGS 266
>gi|319892318|ref|YP_004149193.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
gi|317162014|gb|ADV05557.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
Length = 646
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 40/332 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK L ++ N+IAAGEV++RP++ +KELLENS+DA +T I + V + G+ +++ DNG+
Sbjct: 3 KIKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI ++D+ +V R TSKL + +DL I T GFRGEALASI+ VA +T+ T T
Sbjct: 63 GILQDDLGLVFHRHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTLQTSTDGVAGYE 122
Query: 119 ---------KTSPCAYRWCTYL-ADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHT 168
P R T + D + +Y++ ++G + + H
Sbjct: 123 VYAEEGEIISEKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSHP 182
Query: 169 LVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGWITN 220
+ + S +KI++ + EI + +L+ +EG + L TG++
Sbjct: 183 DIRIALS--NDGKKILQTNGSGRTNEVMAEIYGMKVARDLIRIEGDTSDYHL--TGYVAK 238
Query: 221 VNFSTKKMTFL-LFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
S ++ LFIN + + +++ Y + G +P VYL++ MDP VDVNV
Sbjct: 239 PEHSRSNRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNV 298
Query: 274 HPTKHEVHFLHEDT----IIERVQSMLEKTLL 301
HPTK EV ED I+ +++ + LL
Sbjct: 299 HPTKLEVRLSKEDQLFDLIVAKIREAFKDQLL 330
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 9/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T I + V + G+ +++ DNG+GI ++D+ +V
Sbjct: 20 VVERPSSVVKELLENS-----IDAGATEINIEVMESGIASIRVVDNGSGILQDDLGLVFH 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + +DL I T GFRGEALASI+ VA +T+ +T T A Y +
Sbjct: 75 RHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTL--QTSTDGVAGYEVYAEEGEIIS 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KP +GT I + LFYN P R K +K E KI D+V+R A+ +P + L
Sbjct: 133 EKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALSNDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRF 500
+ + ++TN + +EV+ IYG ++R + R
Sbjct: 193 KKI--LQTNGSGRTNEVMAEIYGMKVARDLIRI 223
>gi|392534784|ref|ZP_10281921.1| methyl-directed mismatch repair protein [Pseudoalteromonas arctica
A 37-1-2]
Length = 615
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 167/321 (52%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKDQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPV--GSANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGSGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKDQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|312793676|ref|YP_004026599.1| DNA mismatch repair protein mutl [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180816|gb|ADQ40986.1| DNA mismatch repair protein MutL [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 588
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 37/310 (11%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
KL E++ + +AAGEV++RPA+ LKELLENS+DA ++ I V +++GG+K +++ DNG GI
Sbjct: 6 KLPESITHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK----------- 117
+D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K
Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125
Query: 118 ------TKTSPCAYRWCTYL--ADLM-----ALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
S C ++ T + D+ L ++ Q+ ++ +K W
Sbjct: 126 VEGGKVLSKSFCPFKEGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLS--VEGTDDAFQLKVTGWITNVN 222
+ + P + +E I S+ +E++ VE + + LKV G+ N
Sbjct: 186 SFRAEADGKRQIFTPGDNKIESV----IGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPT 241
Query: 223 FS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
S + + ++N + I++ + + G FP V+L + + P +DVNVHP
Sbjct: 242 VSRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHP 301
Query: 276 TKHEVHFLHE 285
+K EV F E
Sbjct: 302 SKLEVKFRDE 311
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 16/230 (6%)
Query: 281 HFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
H L ++ER S L++ L S + ++ I V +++GG+K +++ DNG GI +
Sbjct: 13 HILAAGEVVERPASCLKELLENSIDA-----GASLIDVKIEKGGMKRIEVYDNGKGIHPD 67
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK--TKTSPCAYR-- 396
D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K + C +
Sbjct: 68 DIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVKVE 127
Query: 397 ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
+ SK P K +GT+II ED+FYN P R K LK PS E +VV + A+
Sbjct: 128 GGKVLSKSFCPFK-----EGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAW 182
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
P + F + + + I T ++ VIG+I+G I + + FS +S
Sbjct: 183 PEISF--RAEADGKRQIFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKES 230
>gi|218768445|ref|YP_002342957.1| DNA mismatch repair protein [Neisseria meningitidis Z2491]
gi|433541296|ref|ZP_20497745.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63006]
gi|20455150|sp|Q9JTS2.1|MUTL_NEIMA RecName: Full=DNA mismatch repair protein MutL
gi|121052453|emb|CAM08789.1| DNA mismatch repair protein [Neisseria meningitidis Z2491]
gi|432276943|gb|ELL31995.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63006]
Length = 658
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 173/366 (47%), Gaps = 85/366 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRAD 331
Query: 310 YTQSTS 315
T+S S
Sbjct: 332 LTESVS 337
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|217979001|ref|YP_002363148.1| DNA mismatch repair protein MutL [Methylocella silvestris BL2]
gi|254766172|sp|B8ETE4.1|MUTL_METSB RecName: Full=DNA mismatch repair protein MutL
gi|217504377|gb|ACK51786.1| DNA mismatch repair protein MutL [Methylocella silvestris BL2]
Length = 605
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 166/353 (47%), Gaps = 40/353 (11%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+++LD +++RIAAGEVI+RPA+ALKEL+EN+LDA + I V ++ GG KL+++ D+G G
Sbjct: 3 VRRLDPVLIDRIAAGEVIERPASALKELIENALDAGARRIDVAIEAGGRKLIRVVDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ ED+D+ ER TSKL + DL+SI T GFRGEAL SI VA L I ++ S R
Sbjct: 63 MAPEDLDLAVERHATSKLPE-GDLSSIETLGFRGEALPSIGSVAALEIFSRAMGSAVGAR 121
Query: 127 W---CTY----------------LADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
C + DL A + ++L+ D+ + E + H
Sbjct: 122 VKVDCGVKEGPAPAAQPQGTRVEIRDLFAGTPARL-KFLRTDRAEARASAEIVERLAMAH 180
Query: 168 TLV------------PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVT 215
V L P ++ + +L +N L VE + +L+
Sbjct: 181 PQVRFGFASSDVRGFDLAACADSPEGRLTRFSAVLGKDFRDN--ALFVEAEREGVRLQGF 238
Query: 216 GWITNVNFSTKKMTFLLFINNPIK-RMI----EQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ + ++ + P++ R++ Y +LP G + L L DP+ VD
Sbjct: 239 AGLPTWHRASAAAQHVFVNGRPVRDRLLLGAARAAYMDFLPSGRHAALVLFLTCDPREVD 298
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQG 323
VNVHP K EV F + L++TL + ++++ V ++G
Sbjct: 299 VNVHPAKAEVRFRDPGLTRGLIVGALKQTLADAQHRASPVNGASALDVLARRG 351
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S L++ + + I V ++ GG KL+++ D+G G+ ED+D+ E
Sbjct: 19 VIERPASALKELI-----ENALDAGARRIDVAIEAGGRKLIRVVDDGCGMAPEDLDLAVE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + DL+SI T GFRGEAL SI VA L I ++ S R +D +K+
Sbjct: 74 RHATSKLPE-GDLSSIETLGFRGEALPSIGSVAALEIFSRAMGSAVGARVK-VDCGVKEG 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
P A QGT++ DLF P R K L+ E A++V R A+ +P V F +
Sbjct: 132 PAPAAQPQGTRVEIRDLFAGTPARLKFLRTDRAEARASAEIVERLAMAHPQVRFGFASSD 191
Query: 468 ENLADIRTNVNSSH------SEVIGNIYGNN 492
D+ +S S V+G + +N
Sbjct: 192 VRGFDLAACADSPEGRLTRFSAVLGKDFRDN 222
>gi|445296149|ref|ZP_21411244.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444882574|gb|ELY06521.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 373
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAFQ----------L 212
+ R L NL L ++ GT Q L
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 213 KVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T +T + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|418482693|ref|ZP_13051706.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366062575|gb|EHN26804.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
Length = 334
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAFQ----------L 212
+ R L NL L ++ GT Q L
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 213 KVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T +T + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+ V L
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTLNLSHNG 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + R E +G I G
Sbjct: 194 KLVRQYRAVAKDGQKERRLGAICG 217
>gi|433469649|ref|ZP_20427066.1| DNA mismatch repair protein mutL [Neisseria meningitidis 98080]
gi|432202546|gb|ELK58606.1| DNA mismatch repair protein mutL [Neisseria meningitidis 98080]
Length = 658
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 173/366 (47%), Gaps = 85/366 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQNLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRAD 331
Query: 310 YTQSTS 315
T+S S
Sbjct: 332 LTESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 120/213 (56%), Gaps = 7/213 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRT-NVNSSHSEVIGNIY 489
H+ F+LK+ + + + N++ + ++G+ +
Sbjct: 184 HIAFSLKRDGKQVFKLPAQNLHERIAAIVGDDF 216
>gi|433520217|ref|ZP_20476935.1| DNA mismatch repair protein mutL [Neisseria meningitidis 65014]
gi|432253755|gb|ELL09094.1| DNA mismatch repair protein mutL [Neisseria meningitidis 65014]
Length = 658
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 170/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|359443330|ref|ZP_09233172.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20429]
gi|358034742|dbj|GAA69421.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20429]
Length = 617
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 167/321 (52%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKDQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGSGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKDQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|224826520|ref|ZP_03699621.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
gi|224601121|gb|EEG07303.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
Length = 629
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 156/319 (48%), Gaps = 44/319 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPA+ALKE+LENSLDA + I V + QGG+KL+++ DNG
Sbjct: 3 RIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + +R TSK+ DL S++T GFRGE LASI+ V+ LT+I++ AY
Sbjct: 63 GIVPDDLPLALDRHATSKIASLADLESVATLGFRGEGLASIASVSRLTLISRPHEEAHAY 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTL--VP 171
+ +A AL +E + + ++ D K E Y T +
Sbjct: 123 Q---IIAIDGALHSVEPAAHAPGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIA 179
Query: 172 LMKSQYQ-------------PSEKIVER--ACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
L Q + P++ + ER A L + L L + G L++ G
Sbjct: 180 LAHPQVEFLLRHNGKVVWRLPAQSLAERVGALLGKDFVEAALPLETAAGG-----LQLAG 234
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++ + +S + ++N R + Q Y L P L L +DP V
Sbjct: 235 FVASPTYSKASRDAQYFYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFLTIDPAGV 294
Query: 270 DVNVHPTKHEVHFLHEDTI 288
DVNVHPTK EV F I
Sbjct: 295 DVNVHPTKIEVRFRESQAI 313
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER S L++ L S + I V + QGG+KL+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPASALKEMLENS-----LDAGADRITVDLAQGGIKLIRVTDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + +R TSK+ DL S++T GFRGE LASI+ V+ LT+I++ AY+
Sbjct: 65 VPDDLPLALDRHATSKIASLADLESVATLGFRGEGLASIASVSRLTLISRPHEEAHAYQI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
ID L ++P A GT + DL++N P RRK LK + EY A R A+ +P
Sbjct: 125 IAIDGALHS-VEPAAHAPGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
V F L+ + + + S +E +G + G +
Sbjct: 184 QVEFLLRHNGKVVWRLPAQ---SLAERVGALLGKDF 216
>gi|344996158|ref|YP_004798501.1| DNA mismatch repair protein mutL [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964377|gb|AEM73524.1| DNA mismatch repair protein mutL [Caldicellulosiruptor
lactoaceticus 6A]
Length = 588
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 37/310 (11%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
KL E++ + +AAGEV++RPA+ LKELLENS+DA ++ I V +++GG+K +++ DNG GI
Sbjct: 6 KLPESITHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK----------- 117
+D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K
Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125
Query: 118 ------TKTSPCAYRWCTYL--ADLM-----ALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
S C ++ T + D+ L ++ Q+ ++ +K W
Sbjct: 126 VEGGKVLSKSFCPFKEGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLS--VEGTDDAFQLKVTGWITNVN 222
+ + P + +E I S+ +E++ VE + + LKV G+ N
Sbjct: 186 SFRAEADGKRQIFTPGDNKIESV----IGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPT 241
Query: 223 FS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
S + + ++N + I++ + + G FP V+L + + P +DVNVHP
Sbjct: 242 VSRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHP 301
Query: 276 TKHEVHFLHE 285
+K EV F E
Sbjct: 302 SKLEVKFRDE 311
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 16/230 (6%)
Query: 281 HFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
H L ++ER S L++ L S + ++ I V +++GG+K +++ DNG GI +
Sbjct: 13 HILAAGEVVERPASCLKELLENSIDA-----GASLIDVKIEKGGMKRIEVYDNGKGIHPD 67
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK--TKTSPCAYR-- 396
D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K + C +
Sbjct: 68 DIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVKVE 127
Query: 397 ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
+ SK P K +GT+II ED+FYN P R K LK PS E +VV + A+
Sbjct: 128 GGKVLSKSFCPFK-----EGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAW 182
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
P + F + + + I T ++ VIG+I+G I + + FS +S
Sbjct: 183 PEISF--RAEADGKRQIFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKES 230
>gi|261367033|ref|ZP_05979916.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM
15176]
gi|282571151|gb|EFB76686.1| DNA mismatch repair domain protein [Subdoligranulum variabile DSM
15176]
Length = 687
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 45/394 (11%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ LD+ IAAGEV++RPA+ KELLEN++DA +T I ++ +GG+ LQI DNG+
Sbjct: 3 EIRVLDKHTAELIAAGEVVERPASVAKELLENAIDAGATQITLSATRGGIAQLQIVDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS--PC 123
GI E +D R TSK+ EDLN I T GFRGEALASI+ VA + ++T+T+ C
Sbjct: 63 GIEAEYIDKAFIRHATSKIASAEDLNHIHTLGFRGEALASIASVAKVEVLTRTEQDEYAC 122
Query: 124 AYRWC----------------TYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
YR T + + ++L++D + E + + H
Sbjct: 123 CYRIAGGEPQGTEPGARPVGTTITVNELFYNTPARMKFLKKDASEGTYVAETVLHAALSH 182
Query: 168 TLVPLM-----KSQYQ-PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNV 221
+ K Q+ P + + A + +LL V+G + + ++TG IT
Sbjct: 183 PEISFRFIREGKQQFMTPGDGELRSAVYAVMGREFARDLLPVDGGNGVY--RITGLITPP 240
Query: 222 NFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
+ T F+N + +E Y + +G FP L L M VDVNVH
Sbjct: 241 RACRASRGTQHFFVNGRYVKNRTMMAALENAYKGTMMQGKFPGAVLMLEMPADLVDVNVH 300
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLL--GSNTSRVFYTQSTSIQVTVKQGGLKLLQIQD 332
P K E+ F E + + V + L GS R + TS Q + + Q
Sbjct: 301 PAKTEIRFARESDVFDAVYRAVRTALTTPGSGECRFEMSHDTSAQ----KAEVPAKQPSS 356
Query: 333 NGTGIRKEDMDIVCE--RFTTSKLTQFEDLNSIS 364
GT + V E RFTT ++ LN ++
Sbjct: 357 QGTPAHPQ----VPEKSRFTTLSAAEYRALNRLT 386
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTG 336
KH + ++ER S+ ++ L +T I ++ +GG+ LQI DNG+G
Sbjct: 9 KHTAELIAAGEVVERPASVAKELL-----ENAIDAGATQITLSATRGGIAQLQIVDNGSG 63
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS--PCA 394
I E +D R TSK+ EDLN I T GFRGEALASI+ VA + ++T+T+ C
Sbjct: 64 IEAEYIDKAFIRHATSKIASAEDLNHIHTLGFRGEALASIASVAKVEVLTRTEQDEYACC 123
Query: 395 YRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
YR I +P A GT I +LFYN P R K LK+ + E +A+ V A+
Sbjct: 124 YR---IAGGEPQGTEPGARPVGTTITVNELFYNTPARMKFLKKDASEGTYVAETVLHAAL 180
Query: 455 HNPHVGFTLKKQNEN 469
+P + F ++ +
Sbjct: 181 SHPEISFRFIREGKQ 195
>gi|449329095|gb|AGE95369.1| DNA mismatch repair protein [Encephalitozoon cuniculi]
Length = 563
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 169/331 (51%), Gaps = 53/331 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L V++RI+AGEVI RP N LKE +ENSLDA ST I + ++Q GL L ++D+G
Sbjct: 2 EIKRLPSDVISRISAGEVITRPYNILKETIENSLDANSTHITIKMEQDGLTL-TVEDDGD 60
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D +++C+++ TSKLT+ E+L S+S++GFRGEAL+SIS A + + +K + Y
Sbjct: 61 GIHESDFELLCKQYCTSKLTKEEELFSLSSYGFRGEALSSISRCARIKVRSKRREGEIGY 120
Query: 126 RWCTYLADLMALALMEM------------------SQYLQRDKEQIGDKEEKQWYRTVEH 167
+++ + + M ++ + +E+I E W +
Sbjct: 121 EAVYRDTEMITIKDVGMKDGTIVEIKNIFYNNKVREKHFSKKREEI---REMMWLGGMYS 177
Query: 168 TLVPLMKSQYQPSEKIVE----RACLLE------------IASLNNLELLSVEG----TD 207
+ + EK+ E R C+ E + LN EL +G
Sbjct: 178 VFNSRISFELFYGEKLQELPKSRVCVGEDGYSNEDRVKRKVGMLN--ELYKADGKLLFVS 235
Query: 208 DAFQLKVTGWITNVNFSTKKMTFLLFINNPI---KRMIEQVYSIY---LPKGSFPFVYLS 261
D L + + F +K +LF+N + + M E ++ +Y LP P +YL
Sbjct: 236 DKEYLVI---FSTQQFCLRKGMLVLFVNGRLVVSQEMKESLFKVYKDILPPQKQPLIYLE 292
Query: 262 LCMDPKNVDVNVHPTKHEVHFLHEDTIIERV 292
L ++ VDVNVHP+K EV F +E+++ +R+
Sbjct: 293 LYVEKSMVDVNVHPSKREVLFSNEESMTQRL 323
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I + ++Q GL L ++D+G GI + D +++C+++ TSKLT+ E+L S+S++GFRGEA
Sbjct: 39 STHITIKMEQDGLTL-TVEDDGDGIHESDFELLCKQYCTSKLTKEEELFSLSSYGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SIS A + + +K + Y A Y D+++ IK GT + +++FYN R
Sbjct: 98 LSSISRCARIKVRSKRREGEIGYEAVYRDTEMI-TIKDVGMKDGTIVEIKNIFYNNKVRE 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K + EE ++ + Y+V N + F L
Sbjct: 157 KHFSKKREEIREMMWLGGMYSVFNSRISFEL 187
>gi|386319413|ref|YP_006015576.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
gi|323464584|gb|ADX76737.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
Length = 646
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 40/332 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK L ++ N+IAAGEV++RP++ +KELLENS+DA +T I + V + G+ +++ DNG+
Sbjct: 3 KIKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI ++D+ +V R TSKL + +DL I T GFRGEALASI+ VA +T+ T T
Sbjct: 63 GILQDDLGLVFHRHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTLQTSTDGVAGYE 122
Query: 119 ---------KTSPCAYRWCTYL-ADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHT 168
P R T + D + +Y++ ++G + + H
Sbjct: 123 VYAEEGEIISEKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSHP 182
Query: 169 LVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGWITN 220
+ + S +KI++ + EI + +L+ +EG + L TG++
Sbjct: 183 DIRIALS--NDGKKILQTNGSGRTNEVMAEIYGMKVARDLIRIEGDTSDYHL--TGYVAK 238
Query: 221 VNFSTKKMTFL-LFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNV 273
S ++ LFIN + + +++ Y + G +P VYL++ MDP VDVNV
Sbjct: 239 PEHSRSNRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNV 298
Query: 274 HPTKHEVHFLHEDT----IIERVQSMLEKTLL 301
HPTK EV ED I+ +++ + LL
Sbjct: 299 HPTKLEVRLSKEDQLFDLIVAKIREAFKDQLL 330
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 9/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S +T I + V + G+ +++ DNG+GI ++D+ +V
Sbjct: 20 VVERPSSVVKELLENS-----IDAGATEINIEVMESGIASIRVVDNGSGILQDDLGLVFH 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + +DL I T GFRGEALASI+ VA +T+ +T T A Y +
Sbjct: 75 RHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTL--QTSTDGVAGYEVYAEEGEIIS 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KP +GT I + LFYN P R K +K E KI D+V+R A+ +P + L
Sbjct: 133 EKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALSNDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRF 500
+ + ++TN + +EV+ IYG ++R + R
Sbjct: 193 KKI--LQTNGSGRTNEVMAEIYGMKVARDLIRI 223
>gi|300715038|ref|YP_003739841.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
gi|299060874|emb|CAX57981.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
Length = 627
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 55/339 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGAKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A
Sbjct: 63 IGKDELSMALARHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ L+ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMAVTLKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEI 174
Query: 184 VERACL--LEIA---SLNNLELLSVEGTDDAFQ--------------------------L 212
+ R L ++A + N + G D Q L
Sbjct: 175 IRRIALARFDVAFSLTHNGKLMRQYRGVADHSQRERRLGAICGTAFLSHALAIEWQHGDL 234
Query: 213 KVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + ++ +T L ++N + R I Q Y L P L L +
Sbjct: 235 SLKGWVAD-PVGSRAITDLQYCYVNGRMMRDRLINHAIRQAYQDKLGDSHQPAYVLYLEI 293
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 294 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQEA 332
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + + +GG KL++I+DNG+GI K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIEIDKGGAKLIRIRDNGSGIGKDELSMALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+T +DL +I + GFRGEALASIS V+ LT+ ++T+ A++A +
Sbjct: 74 RHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQAEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+ I +++ R A+ V F+L
Sbjct: 134 LKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIALARFDVAFSLTHNG 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + R + S E +G I G
Sbjct: 194 KLMRQYRGVADHSQRERRLGAICG 217
>gi|269797933|ref|YP_003311833.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
gi|269094562|gb|ACZ24553.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
Length = 681
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 29/315 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I LDET +N+IAAGEV++RPA+ +KEL+ENS+DA +T+I+V + +GG+ ++I DNG G
Sbjct: 4 IHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDNGIG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ +ED + R TSK+ Q EDL I++ GFRGEALASI+ V+H ++IT+ S R
Sbjct: 64 MTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLITRKADSDLGTR 123
Query: 127 W---------CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQY 177
C + + + K E+ ++ + L S
Sbjct: 124 ITVDGGIFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLALSNP 183
Query: 178 QPSEKIV--ERACLLEIA----SLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFL 231
S K++ +R ++ S L + DD F + ++ K T L
Sbjct: 184 HISFKLIIDDRVAIITPGNGDISDTVAALYGYKTKDDIFTVAYESDSIYIDGVVSKPTLL 243
Query: 232 --------LFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
+ +NN I + I+ Y LPK P V L++ + + VD+NVHP K
Sbjct: 244 KSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINVHPRK 303
Query: 278 HEVHFLHEDTIIERV 292
EV F + I + V
Sbjct: 304 SEVKFSDDKIIFKAV 318
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 16/219 (7%)
Query: 280 VHFLHEDTI--------IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQ 331
+H L E TI +ER S++++ + S +T+I+V + +GG+ ++I
Sbjct: 4 IHVLDETTINKIAAGEVVERPASVIKELIENS-----IDASATNIEVEIGEGGVAYMRIT 58
Query: 332 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 391
DNG G+ +ED + R TSK+ Q EDL I++ GFRGEALASI+ V+H ++IT+ S
Sbjct: 59 DNGIGMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLITRKADS 118
Query: 392 PCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSR 451
R + +D + P GT I +DLFYN P RRK LK E +KI D+V +
Sbjct: 119 DLGTRIT-VDGGIFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGK 177
Query: 452 YAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
A+ NPH+ F L + I T N S+ + +YG
Sbjct: 178 LALSNPHISFKLIIDDR--VAIITPGNGDISDTVAALYG 214
>gi|416423482|ref|ZP_11690871.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416433162|ref|ZP_11696688.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416442146|ref|ZP_11702233.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416447160|ref|ZP_11705672.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416455350|ref|ZP_11710975.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416457821|ref|ZP_11712423.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416465103|ref|ZP_11716634.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416482175|ref|ZP_11723701.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416488897|ref|ZP_11725945.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501175|ref|ZP_11731909.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416543433|ref|ZP_11752215.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416580658|ref|ZP_11772049.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416587722|ref|ZP_11776258.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416592133|ref|ZP_11778954.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416600093|ref|ZP_11784040.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416607567|ref|ZP_11788638.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416615632|ref|ZP_11793544.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416623736|ref|ZP_11797564.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416633569|ref|ZP_11801957.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416644201|ref|ZP_11806584.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416646398|ref|ZP_11807664.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416656015|ref|ZP_11812991.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669437|ref|ZP_11819403.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416683733|ref|ZP_11824573.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689164|ref|ZP_11825421.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416708527|ref|ZP_11833389.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710054|ref|ZP_11834159.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416718912|ref|ZP_11840963.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416726179|ref|ZP_11846240.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416731377|ref|ZP_11849292.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416735771|ref|ZP_11851655.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416744959|ref|ZP_11856917.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416752539|ref|ZP_11860351.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416763850|ref|ZP_11867524.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416770358|ref|ZP_11871710.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418492405|ref|ZP_13058900.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418496518|ref|ZP_13062952.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500913|ref|ZP_13067304.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418503714|ref|ZP_13070073.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418508374|ref|ZP_13074677.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418523809|ref|ZP_13089797.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|322615521|gb|EFY12441.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618581|gb|EFY15470.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622006|gb|EFY18856.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627730|gb|EFY24521.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631037|gb|EFY27801.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637744|gb|EFY34445.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642408|gb|EFY39012.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644023|gb|EFY40571.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650491|gb|EFY46899.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653544|gb|EFY49872.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659730|gb|EFY55973.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662059|gb|EFY58275.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666192|gb|EFY62370.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672612|gb|EFY68723.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676042|gb|EFY72113.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680526|gb|EFY76564.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684580|gb|EFY80584.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192895|gb|EFZ78121.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197229|gb|EFZ82369.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201654|gb|EFZ86718.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323213177|gb|EFZ97979.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215550|gb|EGA00294.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219535|gb|EGA04020.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227838|gb|EGA11992.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229008|gb|EGA13137.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236380|gb|EGA20456.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238715|gb|EGA22767.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241834|gb|EGA25863.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323248017|gb|EGA31954.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254652|gb|EGA38463.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258289|gb|EGA41966.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263565|gb|EGA47086.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265839|gb|EGA49335.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270283|gb|EGA53731.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|366056948|gb|EHN21253.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366057707|gb|EHN22008.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366067445|gb|EHN31595.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366072042|gb|EHN36134.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366079629|gb|EHN43611.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366831088|gb|EHN57954.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372208121|gb|EHP21617.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 618
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|346314848|ref|ZP_08856365.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905786|gb|EGX75523.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 695
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 57/337 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LDE + N IAAGEV++RP +KEL+EN +DA +++I++ + QGG+ + I D+G
Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS---- 121
G+ ED + ER TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS
Sbjct: 63 GMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEV 122
Query: 122 -----------PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV 170
PC T ++E+ Q+ + + Q+ E +L+
Sbjct: 123 EINYGKLISARPCGTPKGT---------MIEIQNLFQKTPARFKHLKSPQY----EFSLI 169
Query: 171 PLMKSQYQPSEKIV-------ERACLLEIASLNNLELL-------------SVEGTDDAF 210
+ ++ S + R S N LE+L S++G+D +
Sbjct: 170 SDVVQKFALSHPEIGFCLSHDGRTVFKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQDY 229
Query: 211 QLKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
++K G+I F+ K LL+IN +++ I YS Y+PK +P V + L
Sbjct: 230 KIK--GYIMQPQFNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLL 287
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
MD + VDVNVHP+K E+ E + + + + K L
Sbjct: 288 MDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKAL 324
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER Q ++++ + +++I++ + QGG+ + I D+G G+ ED + E
Sbjct: 20 VVERPQGIVKELV-----ENCIDAHASNIEIQISQGGIATITIIDDGDGMDPEDATLAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS +Y KL
Sbjct: 75 RHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEVEINY--GKLISA 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PC +GT I ++LF P R K LK P E++ I+DVV ++A+ +P +GF L
Sbjct: 133 -RPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSHPEIGFCLSHDG 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ +T + + EV+ IYG + ++ + Q
Sbjct: 192 RTV--FKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQ 227
>gi|359431585|ref|ZP_09222017.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20652]
gi|357921772|dbj|GAA58266.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20652]
Length = 615
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 167/321 (52%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKDQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAISRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPV--GSANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGSGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKDQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|19173567|ref|NP_597370.1| DNA MISMATCH REPAIR PROTEIN (MUTL/HEXB FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19170773|emb|CAD26547.1| DNA MISMATCH REPAIR PROTEIN (MUTL/HEXB FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 563
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 170/326 (52%), Gaps = 43/326 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L V++RI+AGEVI RP N LKE +ENSLDA ST I + ++Q GL L ++D+G
Sbjct: 2 EIKRLPSDVISRISAGEVITRPYNILKETIENSLDANSTHITIKMEQDGLTL-TVEDDGD 60
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D +++C+++ TSKLT+ E+L S+S++GFRGEAL+SIS A + + +K + Y
Sbjct: 61 GIHESDFELLCKQYCTSKLTKEEELFSLSSYGFRGEALSSISRCARIKVRSKRREGEIGY 120
Query: 126 RWCTYLADLMALALMEM------------------SQYLQRDKEQIGDKEEKQWYRTVEH 167
+++ + + M ++ + +E+I E W +
Sbjct: 121 EAVYRDTEMITIKGVGMKDGTIVEIKNIFYNNKVREKHFSKKREEI---REMMWLVGMYS 177
Query: 168 TLVPLMKSQYQPSEKIVE----RACLLEIASLN------NLELLSVEGTDDAFQLKVTGW 217
+ + EK+ E R C+ E N + +L+ D L V+
Sbjct: 178 VFNSRISFELFYGEKLQELPKSRVCVGEDGYSNEDRVKRKVGMLNELYKADGKLLFVSDK 237
Query: 218 ITNVNFST-----KKMTFLLFINNPI---KRMIEQVYSIY---LPKGSFPFVYLSLCMDP 266
V FST +K +LF+N + + M E ++ +Y LP P +YL L ++
Sbjct: 238 EYLVIFSTQQFCLRKGMLVLFVNGRLVVSQEMKESLFKVYKDILPPQKQPLIYLELYVEK 297
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERV 292
VDVNVHP+K EV F +E+++ +R+
Sbjct: 298 SMVDVNVHPSKREVLFSNEESMTQRL 323
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I + ++Q GL L ++D+G GI + D +++C+++ TSKLT+ E+L S+S++GFRGEA
Sbjct: 39 STHITIKMEQDGLTL-TVEDDGDGIHESDFELLCKQYCTSKLTKEEELFSLSSYGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SIS A + + +K + Y A Y D+++ IK GT + +++FYN R
Sbjct: 98 LSSISRCARIKVRSKRREGEIGYEAVYRDTEMI-TIKGVGMKDGTIVEIKNIFYNNKVRE 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K + EE ++ +V Y+V N + F L
Sbjct: 157 KHFSKKREEIREMMWLVGMYSVFNSRISFEL 187
>gi|416037415|ref|ZP_11573912.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|347995815|gb|EGY36959.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
Length = 513
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 45/341 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
Query: 127 WCTYLADLMAL---------ALMEMS----------QYLQRDKEQIGDKEE-------KQ 160
D+ + +E++ ++L+ +K + +E +
Sbjct: 123 VYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEVIRRIALAK 182
Query: 161 WYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLKVTG 216
++ + TL K Q + L +A++ L ++ D L ++G
Sbjct: 183 FH--INFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGEHFIQNALQIDWKHD--DLHLSG 238
Query: 217 WITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
W+ F+ + F ++N + R I Q Y+ YL +P L + ++P V
Sbjct: 239 WVALPQFNRPQNDFNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLNPNEV 298
Query: 270 DVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNTS 306
DVNVHPTKHEV F L D I + + + L + N S
Sbjct: 299 DVNVHPTKHEVRFRQSRLVHDFITQGISNALASEQMHLNPS 339
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ +K I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQSEAWQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
+ E++ I +V+ R A+ H+ FTL + L ++ V
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFHINFTLTHNGKVLRQYKSAV 203
>gi|306820529|ref|ZP_07454162.1| DNA mismatch repair protein MutL [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551443|gb|EFM39401.1| DNA mismatch repair protein MutL [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 658
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 174/334 (52%), Gaps = 42/334 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKLD+ +V I+AGEVI+ P + +KEL+ENS+D+K+TS+ V +K GG +++ DNG G
Sbjct: 5 IKKLDDNIVKLISAGEVIESPCSVVKELVENSIDSKATSVVVEIKNGGKSYIRVTDNGCG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
I +E + ++ TTSK++ F+D +I T GFRGEALASIS VA +++ TKT
Sbjct: 65 IGEEYVIEAFKKHTTSKISTFDDFINIGTNGFRGEALASISAVAKISMTTKTADSNYGIT 124
Query: 119 ----------KTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHT 168
KT A T + + + + +L+ DK + G K R +
Sbjct: 125 VVMNNDKLLEKTKTGAKDGTTVIVEELLENVPARKNFLKSDKAE-GAKITDFLIR---YA 180
Query: 169 LV-PLMKSQYQPSEKIV----ERACLLEIASL-----NNLELLSVEGTDDAFQLKVTGWI 218
L P +K +Y + K V ++++ + + +++ V+ F L + G I
Sbjct: 181 LANPNIKIRYINNSKQVFATYATGKVIDVVDIIFGEKHGDKIIEVDEKLSDF-LSIRGII 239
Query: 219 TN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
N +S++KM + +F+N I + IE Y ++P G++P +L + + P VD
Sbjct: 240 GNNSAMYSSRKMQY-IFVNGRIIKDKNITAYIENAYKKFIPSGNYPLFFLDIIIKPSMVD 298
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
VN+HP K EV F E I +++ + L N
Sbjct: 299 VNIHPNKLEVKFSEEKLIYSLIENAISNKLDNHN 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+++TS+ V +K GG +++ DNG GI +E + ++ TTSK++ F+D +I T GFRG
Sbjct: 39 SKATSVVVEIKNGGKSYIRVTDNGCGIGEEYVIEAFKKHTTSKISTFDDFINIGTNGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASIS VA +++ TKT S + KL + K A + GT +I E+L N+P
Sbjct: 99 EALASISAVAKISMTTKTADSNYGITVVMNNDKLLEKTKTGAKD-GTTVIVEELLENVPA 157
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHV 459
R+ LK E KI D + RYA+ NP++
Sbjct: 158 RKNFLKSDKAEGAKITDFLIRYALANPNI 186
>gi|160892635|ref|ZP_02073425.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50]
gi|156865676|gb|EDO59107.1| DNA mismatch repair domain protein [Clostridium sp. L2-50]
Length = 681
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 164/339 (48%), Gaps = 59/339 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ +++IAAGEVI+RP + +KEL+ENS+DA +T+I + +K+GG+ ++I DNG G
Sbjct: 2 IKLLDQYTIDKIAAGEVIERPGSVIKELVENSIDAGATAITIEIKEGGMSFIRITDNGCG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL I++ GFRGEAL+SI+ VA + +ITK + + R
Sbjct: 62 ISKEEVPVAFLRHATSKLQTADDLLKIASLGFRGEALSSIAAVAQVELITKQEDALTGTR 121
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDK------EEKQWYRTVEHTLVPLMKSQYQPS 180
+ + E+S E+IG +Y T MK+
Sbjct: 122 YQIHGGK-------EISN------EEIGAPLGTTIVVRNLFYNTPARK--KFMKTPATEG 166
Query: 181 EKIVERACLLEIASLNNLELLSVEGTDDAF------------------------------ 210
I + C + ++ + + GTD F
Sbjct: 167 SYIYDLVCRMAMSHPDVSFKFIMNGTDKLFTSGNGRLKEIIYHIYGRDITNNLLEINAAN 226
Query: 211 -QLKVTGWITNVNFSTKKMTFL-LFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSL 262
Q+K+TG++ + S +F ++N N + + IE Y ++ FPF ++
Sbjct: 227 DQVKITGYLAKPSISRGNRSFEDYYVNQRYIKSNILTKAIEDAYRTFVMVHKFPFTVINF 286
Query: 263 CMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+DP +DVN+HP K E+ F++E + + + K LL
Sbjct: 287 EIDPSLIDVNIHPAKRELKFINEPDMYDFTYISVRKALL 325
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 121/217 (55%), Gaps = 8/217 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + S + +T+I + +K+GG+ ++I DNG GI KE++ +
Sbjct: 18 VIERPGSVIKELVENSIDA-----GATAITIEIKEGGMSFIRITDNGCGISKEEVPVAFL 72
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL I++ GFRGEAL+SI+ VA + +ITK + + R I +
Sbjct: 73 RHATSKLQTADDLLKIASLGFRGEALSSIAAVAQVELITKQEDALTGTRYQ-IHGGKEIS 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ GT I+ +LFYN P R+K +K P+ E + I D+V R A+ +P V F
Sbjct: 132 NEEIGAPLGTTIVVRNLFYNTPARKKFMKTPATEGSYIYDLVCRMAMSHPDVSFKFIMNG 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSAS 504
+ + T+ N E+I +IYG +I+ + ++A+
Sbjct: 192 TD--KLFTSGNGRLKEIIYHIYGRDITNNLLEINAAN 226
>gi|416525934|ref|ZP_11741988.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416534770|ref|ZP_11747258.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416555097|ref|ZP_11758582.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|417471601|ref|ZP_12167534.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|353622374|gb|EHC71951.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|363557999|gb|EHL42192.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363559914|gb|EHL44061.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363566876|gb|EHL50889.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
Length = 618
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|429125137|ref|ZP_19185669.1| D mismatch repair protein [Brachyspira hampsonii 30446]
gi|426278885|gb|EKV55913.1| D mismatch repair protein [Brachyspira hampsonii 30446]
Length = 611
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 179/350 (51%), Gaps = 42/350 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGEVI+RPA+ LKELLEN++D+ +++I+V+V++ G+K + ++D+G G
Sbjct: 5 IVKLPQSVANRIAAGEVIERPASMLKELLENAIDSGASNIEVSVEEAGIKSMIVEDDGIG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
IR ++ + TSK+ EDL+SI T GFRGEALASIS V +L I++K
Sbjct: 65 IRFNELPLAITHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKNVEESNGGK 124
Query: 119 ---------KTSPCAYRWCT-YLADLMALALMEMSQYLQR-DKEQIGDKEEKQWYRTVEH 167
+ P A T +A + + ++L+ +E KE V+
Sbjct: 125 IVVEGGKIIEHKPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 184
Query: 168 TLVPLMK------SQYQPSEKIVERA--CLLEIASLNNLELLSVEGTDDAFQLKVTGWIT 219
+ +K S Y ++ + ER L + NL + +E D + + G +
Sbjct: 185 NISMKLKNNGKVVSSYIKADTLKERIENYLSDSNIFRNLIEIEIEKDD----ISIYGLFS 240
Query: 220 N--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
N ++ S +K F+ PI+ I+ YS +PK +PF +L + +D +DVN
Sbjct: 241 NSKISQSIRKNNFIFLNKRPIENRVLAYAIKNAYSNAIPKERYPFFFLYINIDSGKIDVN 300
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQ 322
VHP+K EV +E + +L T++ + S S +I+V + +
Sbjct: 301 VHPSKKEVRIKNE----REISGILYNTIVNNINSGNNNLDSVNIEVDIDK 346
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER SML++ L + S +++I+V+V++ G+K + ++D+G GIR ++ +
Sbjct: 21 VIERPASMLKELLENAIDS-----GASNIEVSVEEAGIKSMIVEDDGIGIRFNELPLAIT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL+SI T GFRGEALASIS V +L I++K + K+ +
Sbjct: 76 HHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKNVEESNGGKIVVEGGKIIEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
KP A +QGT+IIA++LF+NIP R K LK S E+ + +V A+ P++ LK
Sbjct: 136 -KPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQPNISMKLK 191
>gi|373123476|ref|ZP_09537322.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
gi|371660809|gb|EHO26053.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
Length = 695
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 57/337 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LDE + N IAAGEV++RP +KEL+EN +DA +++I++ + QGG+ + I D+G
Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS---- 121
G+ ED + ER TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS
Sbjct: 63 GMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEV 122
Query: 122 -----------PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV 170
PC T ++E+ Q+ + + Q+ E +L+
Sbjct: 123 EINYGKLISARPCGTPKGT---------MIEIQNLFQKTPARFKHLKSPQY----EFSLI 169
Query: 171 PLMKSQYQPSEKIV-------ERACLLEIASLNNLELL-------------SVEGTDDAF 210
+ ++ S + R S N LE+L S++G+D +
Sbjct: 170 SDVVQKFALSHPEIGFCLSHDGRTVFKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQDY 229
Query: 211 QLKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
++K G+I F+ K LL+IN +++ I YS Y+PK +P V + L
Sbjct: 230 KIK--GYIMQPQFNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLL 287
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
MD + VDVNVHP+K E+ E + + + + K L
Sbjct: 288 MDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKAL 324
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER Q ++++ + +++I++ + QGG+ + I D+G G+ ED + E
Sbjct: 20 VVERPQGIVKELV-----ENCIDAHASNIEIQISQGGIATITIIDDGDGMDPEDATLAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS +Y KL
Sbjct: 75 RHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEVEINY--GKLISA 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PC +GT I ++LF P R K LK P E++ I+DVV ++A+ +P +GF L
Sbjct: 133 -RPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSHPEIGFCLSHDG 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ +T + + EV+ IYG + ++ + Q
Sbjct: 192 RTV--FKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQ 227
>gi|88858902|ref|ZP_01133543.1| Enzyme in GATC methyl-directed mismatch repair [Pseudoalteromonas
tunicata D2]
gi|88819128|gb|EAR28942.1| Enzyme in GATC methyl-directed mismatch repair [Pseudoalteromonas
tunicata D2]
Length = 616
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 44/326 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ + +GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATQIQIDIDRGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K A++
Sbjct: 63 VYKDELTLALSRHATSKLKTLDDLENICSLGFRGEALASISSVSRLTLSSKPADQSDAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + + + + + EK + ++ L + S
Sbjct: 123 AFAEGRD-MAVTVKPTAHPNGTTIEVVDLFFNTPARRKFLRTEKTEFNHIDELLKRIALS 181
Query: 176 ----------------QYQPSEKIVERACLLEIASLNNLELLS----VEGTDDAFQLKVT 215
QY+P K E+ + IA + E LS +E DD L +
Sbjct: 182 RFDVAITLKHNGKIVRQYRPVMKKEEQ--VKRIAQVAGKEFLSQALFLESGDDG--LSIF 237
Query: 216 GWITNVNFSTK-KMTFL---LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
GWI S + + T++ + + I I Q + P P L L ++P+ VDV
Sbjct: 238 GWILPPGSSVEPQYTYVNGRMMRDKLILHAIRQAFEESCPGIDVPAFVLYLTINPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQ 293
NVHP KHEV F L D I++ V+
Sbjct: 298 NVHPAKHEVRFHQARLVHDFILQAVK 323
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 92/152 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ + +GG KL++I+DNG+G+ K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATQIQIDIDRGGHKLIRIRDNGSGVYKDELTLALSRHATSKLKTLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K A++A + +KP A GT I DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPADQSDAWQAFAEGRDMAVTVKPTAHPNGTTIEVVDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
K L+ E+N I +++ R A+ V TLK
Sbjct: 159 KFLRTEKTEFNHIDELLKRIALSRFDVAITLK 190
>gi|421544765|ref|ZP_15990838.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM140]
gi|421546853|ref|ZP_15992895.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM183]
gi|421549100|ref|ZP_15995122.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2781]
gi|421553068|ref|ZP_15999037.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM576]
gi|402322497|gb|EJU57955.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM183]
gi|402322678|gb|EJU58129.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM140]
gi|402324921|gb|EJU60343.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2781]
gi|402329581|gb|EJU64941.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM576]
Length = 658
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|433477886|ref|ZP_20435204.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70012]
gi|432214702|gb|ELK70598.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70012]
Length = 658
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKFMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|194445394|ref|YP_002043614.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418807991|ref|ZP_13363548.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811724|ref|ZP_13367249.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418816730|ref|ZP_13372222.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418822320|ref|ZP_13377733.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418824758|ref|ZP_13380100.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418833097|ref|ZP_13388030.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418833976|ref|ZP_13388887.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418841352|ref|ZP_13396171.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418848589|ref|ZP_13403327.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854644|ref|ZP_13409312.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|238693596|sp|B4T2R5.1|MUTL_SALNS RecName: Full=DNA mismatch repair protein MutL
gi|194404057|gb|ACF64279.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392777819|gb|EJA34501.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778292|gb|EJA34972.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392787995|gb|EJA44533.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392790091|gb|EJA46593.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392796566|gb|EJA52898.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392805884|gb|EJA61999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392808681|gb|EJA64729.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392819955|gb|EJA75811.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392822889|gb|EJA78693.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392824499|gb|EJA80285.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 618
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+ V F L
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTFNLSHNG 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + R E +G I G
Sbjct: 194 KLVRQYRAVAKDGQKERRLGAICG 217
>gi|392556667|ref|ZP_10303804.1| methyl-directed mismatch repair protein [Pseudoalteromonas undina
NCIMB 2128]
Length = 608
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 169/329 (51%), Gaps = 44/329 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K + A++
Sbjct: 63 IAKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPEQQEAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAQGRD-MAVEVKPVAHPSGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 176 QYQPS------EKIVER--------ACLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V + + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAQAITRVAQVAGKAFAEQGLHIQSGEAGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + + P + + +DP+ VDV
Sbjct: 240 VLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGEQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSML 296
NVHP KHEV F L D I++ ++ ++
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVV 326
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI KE++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGSGIAKEELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K + A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPEQQEAAWQAFAQGRDMAVEVKPVAHPSGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +++ R A+ V TL
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITL 189
>gi|16763178|ref|NP_458795.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144657|ref|NP_807999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213428674|ref|ZP_03361424.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213621067|ref|ZP_03373850.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213648967|ref|ZP_03379020.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213852837|ref|ZP_03382369.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289829983|ref|ZP_06547434.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|378962592|ref|YP_005220078.1| DNA mismatch repair protein mutL [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|20455099|sp|Q8Z187.1|MUTL_SALTI RecName: Full=DNA mismatch repair protein MutL
gi|25327610|pir||AG1048 DNA mismatch repair protein [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16505486|emb|CAD06836.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140296|gb|AAO71859.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374356464|gb|AEZ48225.1| DNA mismatch repair protein mutL [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 618
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|304387173|ref|ZP_07369416.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC
13091]
gi|304338740|gb|EFM04851.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC
13091]
Length = 658
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|416161056|ref|ZP_11606279.1| DNA mismatch repair protein MutL [Neisseria meningitidis N1568]
gi|421538406|ref|ZP_15984582.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93003]
gi|433473829|ref|ZP_20431189.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97021]
gi|433481347|ref|ZP_20438614.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2006087]
gi|433484377|ref|ZP_20441601.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2002038]
gi|433486649|ref|ZP_20443841.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97014]
gi|325128499|gb|EGC51377.1| DNA mismatch repair protein MutL [Neisseria meningitidis N1568]
gi|402316433|gb|EJU51978.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93003]
gi|432209290|gb|ELK65259.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97021]
gi|432218104|gb|ELK73967.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2006087]
gi|432220308|gb|ELK76131.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2002038]
gi|432221168|gb|ELK76981.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97014]
Length = 658
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 78/349 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKAL 325
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|359455907|ref|ZP_09245112.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20495]
gi|358046984|dbj|GAA81361.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20495]
Length = 615
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG KL++I+DNGTG
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGANRIQIDIERGGHKLIRIRDNGTG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKEQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ +++GG KL++I+DNGTGI K+++ + R TSKL +DL +I + GFRGEALAS
Sbjct: 42 IQIDIERGGHKLIRIRDNGTGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RRK L
Sbjct: 102 ISSVSRLTLSSKPKEQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 162 RTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|416169887|ref|ZP_11608247.1| DNA mismatch repair protein MutL [Neisseria meningitidis
OX99.30304]
gi|325130516|gb|EGC53271.1| DNA mismatch repair protein MutL [Neisseria meningitidis
OX99.30304]
Length = 658
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 78/349 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKAL 325
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|421551057|ref|ZP_15997057.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69166]
gi|433471853|ref|ZP_20429236.1| DNA mismatch repair protein mutL [Neisseria meningitidis 68094]
gi|433526285|ref|ZP_20482915.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69096]
gi|433539218|ref|ZP_20495693.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70030]
gi|402328591|gb|EJU63958.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69166]
gi|432207810|gb|ELK63798.1| DNA mismatch repair protein mutL [Neisseria meningitidis 68094]
gi|432261049|gb|ELL16306.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69096]
gi|432272941|gb|ELL28043.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70030]
Length = 658
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|359448954|ref|ZP_09238464.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20480]
gi|358045242|dbj|GAA74713.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. BSi20480]
Length = 612
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 44/329 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIEIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K KT A++
Sbjct: 63 IGKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKTQDAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFTHIDELIKRIALS 181
Query: 176 QYQPS------EKIVE--RA------CLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V RA + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAHAITRVAQVAGKAFAEQGLHIQSGEAGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + P + + +DP+ VDV
Sbjct: 240 VLPV--GSVNTTQYTYVNNRMMRDKLILHAIRQAFEEVSGVQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSML 296
NVHP KHEV F L D I++ ++ ++
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVV 326
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI KE++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIEIERGGHKLIRIRDNGSGIGKEELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K KT A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKTQDAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E+ I +++ R A+ V TL + + R + +H+
Sbjct: 159 KFLRTEKTEFTHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPAHA 208
>gi|312622278|ref|YP_004023891.1| DNA mismatch repair protein mutl [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202745|gb|ADQ46072.1| DNA mismatch repair protein MutL [Caldicellulosiruptor
kronotskyensis 2002]
Length = 589
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 37/310 (11%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
KL E + + +AAGEV++RPA+ LKELLENS+DA + I V +++GG+K +++ DNG GI
Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGANLIDVKIEKGGMKRIEVYDNGKGIH 65
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK----------- 117
+DM+ V ER TTSK+ FED+ SI T GFRGEAL +IS V+ +T+++K
Sbjct: 66 PDDMEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVSKVTLVSKHLEEERGCMVK 125
Query: 118 ------TKTSPCAYRWCTYLA--DLM-----ALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
S C ++ T + D+ L ++ Q+ ++ +K W
Sbjct: 126 VEGGKVLSKSFCPFKEGTRIVVEDIFYNTPARLKFLKSPTTEQKYCLEVVEKIAIAWPEI 185
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLS--VEGTDDAFQLKVTGWITNVN 222
+ + P + +E A I S+ +E++ VE + + LKV G+ N
Sbjct: 186 SFRAEADGKRQIFTPGDNKIESA----IGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPT 241
Query: 223 FS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
S + + ++N + I++ + + G FP V+L + + P +DVNVHP
Sbjct: 242 VSRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFIQIPPSEIDVNVHP 301
Query: 276 TKHEVHFLHE 285
+K E+ F E
Sbjct: 302 SKLEIKFRDE 311
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 16/230 (6%)
Query: 281 HFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
H L ++ER S L++ L S + + I V +++GG+K +++ DNG GI +
Sbjct: 13 HILAAGEVVERPASCLKELLENSIDA-----GANLIDVKIEKGGMKRIEVYDNGKGIHPD 67
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK--TKTSPCAYR-- 396
DM+ V ER TTSK+ FED+ SI T GFRGEAL +IS V+ +T+++K + C +
Sbjct: 68 DMEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVSKVTLVSKHLEEERGCMVKVE 127
Query: 397 ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
+ SK P K +GT+I+ ED+FYN P R K LK P+ E +VV + A+
Sbjct: 128 GGKVLSKSFCPFK-----EGTRIVVEDIFYNTPARLKFLKSPTTEQKYCLEVVEKIAIAW 182
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
P + F + + + I T ++ IG+I+G I + + FS +S
Sbjct: 183 PEISF--RAEADGKRQIFTPGDNKIESAIGSIFGIEIVKNLVEFSLEKES 230
>gi|313900881|ref|ZP_07834371.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
gi|312954301|gb|EFR35979.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
Length = 695
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 57/337 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LDE + N IAAGEV++RP +KEL+EN +DA +++I++ + QGG+ + I D+G
Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS---- 121
G+ ED + ER TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS
Sbjct: 63 GMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEV 122
Query: 122 -----------PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV 170
PC T ++E+ Q+ + + Q+ E +L+
Sbjct: 123 EINYGKLISARPCGTPKGT---------MIEIQNLFQKTPARFKHLKSPQY----EFSLI 169
Query: 171 PLMKSQYQPSEKIV-------ERACLLEIASLNNLELL-------------SVEGTDDAF 210
+ ++ S + R S N LE+L S++G+D +
Sbjct: 170 SDVVQKFALSHPEIGFCLSHDGRTVFKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQDY 229
Query: 211 QLKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
++K G+I F+ K LL+IN +++ I YS Y+PK +P V + L
Sbjct: 230 KIK--GYIMQPQFNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLL 287
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
MD + VDVNVHP+K E+ E + + + + K L
Sbjct: 288 MDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKAL 324
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER Q ++++ + +++I++ + QGG+ + I D+G G+ ED + E
Sbjct: 20 VVERPQGIVKELV-----ENCIDAHASNIEIQISQGGIATITIIDDGDGMDPEDATLAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + DL +I T GFRGEAL SI+ V+H+ + T TS +Y KL
Sbjct: 75 RHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSSTEVEINY--GKLIS- 131
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PC +GT I ++LF P R K LK P E++ I+DVV ++A+ +P +GF L
Sbjct: 132 ARPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSHPEIGFCLSHDG 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ +T + + EV+ IYG + ++ + Q
Sbjct: 192 RTV--FKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQ 227
>gi|417354478|ref|ZP_12130892.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353561574|gb|EHC28474.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
Length = 618
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHSDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|268686693|ref|ZP_06153555.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626977|gb|EEZ59377.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
Length = 654
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSKNTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSKNTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|417377555|ref|ZP_12146429.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417395136|ref|ZP_12157085.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353589491|gb|EHC48270.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353603156|gb|EHC58328.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 618
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|437965800|ref|ZP_20852596.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435339897|gb|ELP08599.1| DNA mismatch repair protein, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
Length = 590
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417493503|ref|ZP_12173242.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353629474|gb|EHC77273.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 618
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|119468156|ref|ZP_01611282.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding
of Vsr and MutS to heteroduplex DNA [Alteromonadales
bacterium TW-7]
gi|119448149|gb|EAW29413.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding
of Vsr and MutS to heteroduplex DNA [Alteromonadales
bacterium TW-7]
Length = 610
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 44/329 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIEIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K KT A++
Sbjct: 63 IGKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKTQDAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFTHIDELIKRIALS 181
Query: 176 QYQPS------EKIVE--RA------CLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V RA + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAHAITRVAQVAGKAFAEQGLHIQSGEAGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + P + + +DP+ VDV
Sbjct: 240 VLPV--GSVNTTQYTYVNNRMMRDKLILHAIRQAFEEVSGVQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSML 296
NVHP KHEV F L D I++ ++ ++
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVV 326
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI KE++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIEIERGGHKLIRIRDNGSGIGKEELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K KT A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKTQDAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E+ I +++ R A+ V TL + + R + +H+
Sbjct: 159 KFLRTEKTEFTHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPAHA 208
>gi|81427977|ref|YP_394976.1| DNA mismatch repair protein [Lactobacillus sakei subsp. sakei 23K]
gi|78609618|emb|CAI54664.1| DNA mismatch repair protein MutL [Lactobacillus sakei subsp. sakei
23K]
Length = 653
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 168/341 (49%), Gaps = 56/341 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L E + N+IAAGEVI+RPA+ +KEL+EN++DA ST + + V+Q GL+++Q+ DNG
Sbjct: 4 KIHELSEILSNQIAAGEVIERPASVVKELVENAIDANSTQVDIVVEQAGLQMIQVIDNGD 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI ED+ + +R TSK+ +DL I + GFRGEALASI+ V+ LTI T T
Sbjct: 64 GIEPEDVPVAFKRHATSKIATRQDLFKIQSLGFRGEALASIASVSDLTIETATADSLGTF 123
Query: 119 -----------KTSPCAYRWCTYLADLM--ALALMEMSQYLQRDKEQIGDKEEKQWYRTV 165
KT+P + DL A ++ + Q + I D +
Sbjct: 124 AHFKGGLLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTELANIVDIVNR------ 177
Query: 166 EHTLVPLMKSQYQPSEKIVERA-CLLEIASLNNL--------------ELLSVEGTDDAF 210
L S Q + + LL+ A N+L +LL+V +D F
Sbjct: 178 ------LAMSHPQIAFTLTNDGHLLLKTAGNNDLKQTIAGIYGVTMAKKLLAVSASDLDF 231
Query: 211 QLKVTGWITNVNFSTKKMTFL------LFINN-PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
K+TG+++ + +L FI N + + I + Y L G +P L++
Sbjct: 232 --KLTGYVSLPELTRATRNYLSILINGRFIKNYQLNKAIIKGYGSKLMVGRYPIAVLAIE 289
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
MDP +DVNVHPTK EV E ++ ++ +++ L N
Sbjct: 290 MDPLLIDVNVHPTKQEVRLSKETALMTLIEGAIKERLATEN 330
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ + ST + + V+Q GL+++Q+ DNG GI ED+ + +
Sbjct: 21 VIERPASVVKELV-----ENAIDANSTQVDIVVEQAGLQMIQVIDNGDGIEPEDVPVAFK 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP---CAYRASYIDSKL 404
R TSK+ +DL I + GFRGEALASI+ V+ LTI T T S ++ ++ +
Sbjct: 76 RHATSKIATRQDLFKIQSLGFRGEALASIASVSDLTIETATADSLGTFAHFKGGLLEEQK 135
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+PI+P GT I DLF+N P R K +K E I D+V+R A+ +P + FTL
Sbjct: 136 TNPIRP-----GTAITVRDLFFNTPARLKYVKTFQTELANIVDIVNRLAMSHPQIAFTLT 190
Query: 465 KQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSA 503
L ++T N+ + I IYG +++++ S++
Sbjct: 191 NDGHLL--LKTAGNNDLKQTIAGIYGVTMAKKLLAVSAS 227
>gi|167995169|ref|ZP_02576259.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|374982721|ref|ZP_09724042.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378447671|ref|YP_005235303.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378453311|ref|YP_005240671.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378702199|ref|YP_005184157.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378987028|ref|YP_005250184.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991623|ref|YP_005254787.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703598|ref|YP_005245326.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498929|ref|YP_005399618.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|422028601|ref|ZP_16374897.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033648|ref|ZP_16379714.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427557746|ref|ZP_18930220.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427575678|ref|ZP_18934810.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427597284|ref|ZP_18939727.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427621757|ref|ZP_18944611.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427646037|ref|ZP_18949499.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658611|ref|ZP_18954216.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663888|ref|ZP_18959127.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427681910|ref|ZP_18964015.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427802066|ref|ZP_18969523.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|205327102|gb|EDZ13866.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261249450|emb|CBG27315.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996690|gb|ACY91575.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160848|emb|CBW20379.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915457|dbj|BAJ39431.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222675|gb|EFX47747.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323132697|gb|ADX20127.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332991170|gb|AEF10153.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380465750|gb|AFD61153.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|414011092|gb|EKS95066.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414012187|gb|EKS96115.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414012525|gb|EKS96440.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414026398|gb|EKT09669.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414027113|gb|EKT10358.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414029815|gb|EKT12968.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414040337|gb|EKT22960.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414041156|gb|EKT23737.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414045775|gb|EKT28145.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414054741|gb|EKT36675.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414059775|gb|EKT41325.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 618
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|167554135|ref|ZP_02347876.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205321590|gb|EDZ09429.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 618
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGTKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGTKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+ V F L
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTFNLSHNG 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + R E +G I G
Sbjct: 194 KLVRQYRAVAKDGQKERRLGAICG 217
>gi|332531849|ref|ZP_08407734.1| DNA mismatch repair protein MutL [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038825|gb|EGI75267.1| DNA mismatch repair protein MutL [Pseudoalteromonas haloplanktis
ANT/505]
Length = 615
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGAG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKEQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG GI K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGAGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKEQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|422788026|ref|ZP_16840763.1| DNA mismatch repair protein MutL [Escherichia coli H489]
gi|323960318|gb|EGB55958.1| DNA mismatch repair protein MutL [Escherichia coli H489]
Length = 475
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 58/342 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
+ R L NL L ++ GT AF
Sbjct: 175 IRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT--AFLEQALAIEWQHG 232
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 233 DLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180
>gi|16767605|ref|NP_463220.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|127553|sp|P14161.1|MUTL_SALTY RecName: Full=DNA mismatch repair protein MutL
gi|154186|gb|AAA27166.1| mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16422919|gb|AAL23179.1| enzyme in methyl-directed mismatch repair [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417522189|ref|ZP_12183708.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353639477|gb|EHC84744.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 167/338 (49%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGT---DDAFQLK------ 213
+ R L NL L ++ GT + A ++
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 214 -VTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T +T + ++N + R I Q L P L L +
Sbjct: 235 TLCGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417330597|ref|ZP_12115128.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353561593|gb|EHC28489.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|418511019|ref|ZP_13077288.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085065|gb|EHN48956.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|238910517|ref|ZP_04654354.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|238797610|ref|ZP_04641107.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
gi|238718607|gb|EEQ10426.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
Length = 630
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 170/335 (50%), Gaps = 47/335 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + + +GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KED+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 INKEDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQ 122
Query: 127 WCTYLADLMA------------LALMEM-------SQYLQRDKEQIGDKEEKQWYRTVEH 167
D+ L ++++ ++++ +K + G +E +
Sbjct: 123 AYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALAR 182
Query: 168 TLVPL-------MKSQYQ----PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTG 216
V + + QY+ PS+ A + A L + +S + D L + G
Sbjct: 183 FDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHDD----LTIRG 238
Query: 217 WITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
W+ + S +M + ++N+ + R I Q Y L P L L +DP
Sbjct: 239 WVADPAASRTLSEMQY-CYVNSRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQ 297
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
VDVNVHP KHEV F L D I + V ++L++
Sbjct: 298 VDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQA 332
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + + +GG KL++I+DNG GI KED+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIDRGGAKLIRIRDNGCGINKEDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRQYRAATDPSQHERRLASICG 217
>gi|56416150|ref|YP_153225.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197365076|ref|YP_002144713.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|81821550|sp|Q5PL49.1|MUTL_SALPA RecName: Full=DNA mismatch repair protein MutL
gi|238690786|sp|B5BKH9.1|MUTL_SALPK RecName: Full=DNA mismatch repair protein MutL
gi|56130407|gb|AAV79913.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096553|emb|CAR62163.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|418866160|ref|ZP_13420624.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392840674|gb|EJA96209.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417441083|ref|ZP_12162098.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353611795|gb|EHC64363.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|168263289|ref|ZP_02685262.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|417345632|ref|ZP_12125690.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|205348021|gb|EDZ34652.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|357952692|gb|EHJ79547.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|437840005|ref|ZP_20846365.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435297276|gb|ELO73564.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|438138482|ref|ZP_20874636.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434940271|gb|ELL46943.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|434381601|ref|YP_006703384.1| DNA mismatch repair protein [Brachyspira pilosicoli WesB]
gi|404430250|emb|CCG56296.1| DNA mismatch repair protein [Brachyspira pilosicoli WesB]
Length = 605
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 169/324 (52%), Gaps = 54/324 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I KL ++V NRIAAGE+I+RPA+ LKELLEN++D+ + +I+V+V++ G+K + ++DNG+G
Sbjct: 5 IMKLPKSVANRIAAGEIIERPASMLKELLENAVDSGADNIEVSVEEAGIKTMIVEDNGSG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +++ + TSK+ EDL++I T GFRGEALASI V +L I++K+ +
Sbjct: 65 IAFDELPLAITHHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGK 124
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKE---------------EKQWYRTVEHTLVP 171
+ A ++E Y + +I K +++Y E V
Sbjct: 125 IV-----VEAGKILEHKPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKE---VF 176
Query: 172 LMKSQYQP--SEKIVERACL----LEIASL--------------NNLELLSVEGTDDAFQ 211
M++ QP + K+ L L++ +L +NL L++E D
Sbjct: 177 DMEALVQPNITMKLYNNGKLVNSYLKVDNLKDRIENYLNDSNVFSNLIELNIEKND---- 232
Query: 212 LKVTGWITN--VNFSTKKMTFLLFINNPIKR-----MIEQVYSIYLPKGSFPFVYLSLCM 264
+ + G +N ++ S +K F+ N PI+ I+ YS +PK +PF +L + +
Sbjct: 233 INIYGLFSNSKISQSMRKNNFIFLNNRPIENRVIAYAIKNAYSNSIPKERYPFFFLYINV 292
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTI 288
D VDVNVHP+K EV +E I
Sbjct: 293 DTNKVDVNVHPSKKEVRIKNERDI 316
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER SML++ L + S + +I+V+V++ G+K + ++DNG+GI +++ +
Sbjct: 21 IIERPASMLKELLENAVDS-----GADNIEVSVEEAGIKTMIVEDNGSGIAFDELPLAIT 75
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
TSK+ EDL++I T GFRGEALASI V +L I++K+ + K+ +
Sbjct: 76 HHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEKTGGKIVVEAGKILEH 135
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
KP A GT+I A++LF+NIP R K LK S E+ + +V A+ P++ L
Sbjct: 136 -KPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKEVFDMEALVQPNITMKL 190
>gi|423656629|ref|ZP_17631928.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
gi|401290370|gb|EJR96064.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
Length = 647
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 168/327 (51%), Gaps = 42/327 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP--- 122
GI + D + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEVDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAPGTH 122
Query: 123 -------------CAYRWCTYLADLMALALMEMS----QYLQRDKEQIGDKEEKQWYRTV 165
A R T D+ L + +Y++ ++G+ + + +
Sbjct: 123 LIIKGGDIIKQEKTASRKGT---DITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAM 179
Query: 166 EHTLVPLMKSQYQPSEKIVE-------RACLLEIASLN-NLELLSVEGTDDAFQLKVTGW 217
H V L + +K++ R L I S+ +L+ +E F +K G+
Sbjct: 180 SHPEVSL--KLFHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIK--GY 235
Query: 218 ITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+T + ++ I N + + I+Q Y LP G +P +LS+ MDP VD
Sbjct: 236 VTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVD 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLE 297
VNVHP K EV F E +++ ++ L+
Sbjct: 296 VNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ +++ GL ++I DNG GI + D + ER TSK+ DL I T GFRGEA
Sbjct: 40 STSIEIHLEEAGLSKIRIIDNGDGIAEVDCIVAFERHATSKIKDENDLFRIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
L SI+ V+ L +IT T +P +++ K D IK A +GT I ++LF+N P
Sbjct: 100 LPSIASVSELELITSTGDAP----GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R K +K E I D+V R A+ +P V L + L + T+ N +V+ +IY
Sbjct: 156 RLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEKKL--LHTSGNGDVRQVLASIYS 213
Query: 491 NNISRRV 497
+++++
Sbjct: 214 IQVAKKL 220
>gi|62182805|ref|YP_219222.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224586199|ref|YP_002639998.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|375117161|ref|ZP_09762331.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|81309508|sp|Q57GM1.1|MUTL_SALCH RecName: Full=DNA mismatch repair protein MutL
gi|254766174|sp|C0Q6C7.1|MUTL_SALPC RecName: Full=DNA mismatch repair protein MutL
gi|62130438|gb|AAX68141.1| enzyme in methyl-directed mismatch repair, stimulates binding of
Vsr and MutS to heteroduplex DNA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|224470727|gb|ACN48557.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322717307|gb|EFZ08878.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|197247369|ref|YP_002149273.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|440765357|ref|ZP_20944376.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440766717|ref|ZP_20945705.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440771863|ref|ZP_20950774.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|238690036|sp|B5F385.1|MUTL_SALA4 RecName: Full=DNA mismatch repair protein MutL
gi|197211072|gb|ACH48469.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436413425|gb|ELP11359.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436420499|gb|ELP18363.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436422048|gb|ELP19887.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417543407|ref|ZP_12194581.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353656721|gb|EHC97384.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|168231394|ref|ZP_02656452.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194472742|ref|ZP_03078726.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194459106|gb|EDX47945.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205334209|gb|EDZ20973.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|167625542|ref|YP_001675836.1| DNA mismatch repair protein [Shewanella halifaxensis HAW-EB4]
gi|189030412|sp|B0TU66.1|MUTL_SHEHH RecName: Full=DNA mismatch repair protein MutL
gi|167355564|gb|ABZ78177.1| DNA mismatch repair protein MutL [Shewanella halifaxensis HAW-EB4]
Length = 637
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 189/364 (51%), Gaps = 54/364 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KL + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG+G
Sbjct: 3 IEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K D+ + R TSKL +DL +I +FGFRGEALASIS V+ L I ++T+ A
Sbjct: 63 IPKADLCLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRL--ILTSRTAEQAEA 120
Query: 127 WCTYLADL-MALALMEMS--------------------QYLQRDKEQIGDKEEKQWY--- 162
W + MA+ ++ + ++L+ DK + +E W
Sbjct: 121 WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRI 178
Query: 163 ----RTVEHTLVPLMKS--QYQPS---EKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
R + TL K+ Y+P+ + ++R L+ + L +E + L
Sbjct: 179 ALARRDIHFTLKHNGKTVRNYRPANTESQYIQRLALVCGKAFAE-TCLRIECQHN--DLS 235
Query: 214 VTGWI---TNVNFSTKKMTFL----LFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++G++ ++ N ++ F L + + + Q ++ Y +G P L L +DP
Sbjct: 236 LSGYLQSPSSANGYSETQYFYVNGRLVKDRLVNHAVRQAFAQYA-EGVSPGYVLMLDLDP 294
Query: 267 KNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVK 321
VDVNVHP KHEV F H+ D I++ +QS + +++ + + QS QV+
Sbjct: 295 HQVDVNVHPAKHEVRF-HQSRYVHDFILQALQSAISQSMELALNNEPEIQQSPDRQVSPT 353
Query: 322 QGGL 325
+G +
Sbjct: 354 RGAV 357
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG+GI K D+ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIEKGGSKLIRIRDNGSGIPKADLCLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I +FGFRGEALASIS V+ L + ++T A++A +++
Sbjct: 74 RHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQAEAWQAHAEGTEMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ + A DLF+N P RR+ LK E+ I + + R A+ + FTLK
Sbjct: 134 VLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALARRDIHFTLKHNG 193
Query: 468 ENLADIR-TNVNSSHSEVIGNIYG 490
+ + + R N S + + + + G
Sbjct: 194 KTVRNYRPANTESQYIQRLALVCG 217
>gi|418843731|ref|ZP_13398526.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418859827|ref|ZP_13414416.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864663|ref|ZP_13419189.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392815780|gb|EJA71711.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392828700|gb|EJA84391.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392830359|gb|EJA86012.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|416070174|ref|ZP_11583599.1| DNA mismatch repair protein MutL [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|347999246|gb|EGY40097.1| DNA mismatch repair protein MutL [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 616
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 49/317 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M +Q +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------RDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 184 VERACL----LEIASLNNLELL-----------------SVEGTD---DAFQ-------L 212
+ R L + +N ++L ++ G D +A Q L
Sbjct: 175 IRRIALAKFHINFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGEDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ F+ + F ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWVALPQFNRPQNDFNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 295 PNEVDVNVHPTKHEVRF 311
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ +K I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQSEAWQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
+ E++ I +V+ R A+ H+ FTL + L ++ V
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFHINFTLTHNGKVLRQYKSAV 203
>gi|168822514|ref|ZP_02834514.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409248052|ref|YP_006888744.1| DNA mismatch repair protein mutL [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|205341068|gb|EDZ27832.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320088786|emb|CBY98544.1| DNA mismatch repair protein mutL [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|161617629|ref|YP_001591594.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168244863|ref|ZP_02669795.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194450332|ref|YP_002048402.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|386589679|ref|YP_006086079.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419731047|ref|ZP_14257971.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419732742|ref|ZP_14259647.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419741588|ref|ZP_14268278.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419745779|ref|ZP_14272400.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419750071|ref|ZP_14276539.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421571589|ref|ZP_16017259.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421576509|ref|ZP_16022106.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421577884|ref|ZP_16023467.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584996|ref|ZP_16030500.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|189030409|sp|A9N4Y4.1|MUTL_SALPB RecName: Full=DNA mismatch repair protein MutL
gi|238690633|sp|B4TFA4.1|MUTL_SALHS RecName: Full=DNA mismatch repair protein MutL
gi|161366993|gb|ABX70761.1| hypothetical protein SPAB_05492 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408636|gb|ACF68855.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205336318|gb|EDZ23082.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|381291361|gb|EIC32610.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381292177|gb|EIC33381.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381302500|gb|EIC43539.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381305129|gb|EIC46073.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381307780|gb|EIC48629.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383796723|gb|AFH43805.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402518077|gb|EJW25463.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402520314|gb|EJW27667.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402525836|gb|EJW33119.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402530498|gb|EJW37715.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|77359236|ref|YP_338811.1| methyl-directed mismatch repair protein [Pseudoalteromonas
haloplanktis TAC125]
gi|123587198|sp|Q3IDU0.1|MUTL_PSEHT RecName: Full=DNA mismatch repair protein MutL
gi|76874147|emb|CAI85368.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding
of Vsr and MutS to heteroduplex DNA [Pseudoalteromonas
haloplanktis TAC125]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 173/332 (52%), Gaps = 50/332 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGAG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +KTK A++
Sbjct: 63 IAQDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKTKHQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAQGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAIARVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V S + + ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPVG-SANTVQY-TYVNNRMMRDKLILHAIRQAFEEVSGAQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHF----LHEDTIIERVQSML 296
VDVNVHP KHEV F L D I++ ++ ++
Sbjct: 295 VDVNVHPAKHEVRFHQGRLVHDFILQAIKQVV 326
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG GI ++++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGAGIAQDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +KTK A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKTKHQEAAWQAFAQGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|417370075|ref|ZP_12141037.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353582658|gb|EHC43253.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|168239735|ref|ZP_02664793.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734797|ref|YP_002117300.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|238693674|sp|B4TSF0.1|MUTL_SALSV RecName: Full=DNA mismatch repair protein MutL
gi|194710299|gb|ACF89520.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197287601|gb|EDY26993.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|416569069|ref|ZP_11765257.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363577076|gb|EHL60902.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGTKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGTKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|238787537|ref|ZP_04631335.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
gi|238724324|gb|EEQ15966.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
Length = 642
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 53/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+D+ + R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++
Sbjct: 63 ISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLMLTSRTAQQNEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYRTV- 165
D MA+ + + ++++ +K + G +E R +
Sbjct: 123 AYAEGRD-MAVTIKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGHIDEV--VRRIA 179
Query: 166 ----------EHT--LVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLK 213
H L+ ++ PS+ A + A L + +S + D L
Sbjct: 180 LARFDVAINLSHNGKLMRHYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD----LT 235
Query: 214 VTGWITNVNFST--KKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
+ GW+ + S +M + ++NN + R I Q Y L P L L +D
Sbjct: 236 IRGWVADPAASRTLSEMQY-CYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDID 294
Query: 266 PKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKT 299
P VDVNVHP KHEV F L D I + V ++L++
Sbjct: 295 PHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQA 332
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI K+D+ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK++ EDL +I + GFRGEALASIS V+ L + ++T A++A +
Sbjct: 74 RHATSKISSLEDLEAILSMGFRGEALASISSVSRLMLTSRTAQQNEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A G+ + DLFYN P RRK ++ E+ I +VV R A+ V L
Sbjct: 134 IKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLSHNG 193
Query: 468 ENLADIRTNVNSS-HSEVIGNIYG 490
+ + R + S H + +I G
Sbjct: 194 KLMRHYRAAPDPSQHERRLASICG 217
>gi|414069617|ref|ZP_11405609.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. Bsw20308]
gi|410807847|gb|EKS13821.1| DNA mismatch repair protein MutL [Pseudoalteromonas sp. Bsw20308]
Length = 615
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 47/321 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ +++GG KL++I+DNGTG
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGANRIQIDIERGGHKLIRIRDNGTG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K K A++
Sbjct: 63 ISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKEQEAAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEK------- 159
D MA+ + ++ ++L+ +K + +E
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 160 --QWYRTVEHT--LVPLMKSQYQPSEKIVERACLLEIA-SLNNLELLSVEGTDDAFQLKV 214
T+ H +V +++ PS+ I A + A + L + S EG L++
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGG-----LQL 236
Query: 215 TGWITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKN 268
GW+ V + T ++NN + R I Q + P + + +DP+
Sbjct: 237 HGWVLPVG--SANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQ 294
Query: 269 VDVNVHPTKHEVHFLHEDTII 289
VDVNVHP KHEV F H+ +I
Sbjct: 295 VDVNVHPAKHEVRF-HQGRLI 314
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ +++GG KL++I+DNGTGI K+++ + R TSKL +DL +I + GFRGEALAS
Sbjct: 42 IQIDIERGGHKLIRIRDNGTGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ +K K A++A + +KP A GT I +DLF+N P RRK L
Sbjct: 102 ISSVSRLTLSSKPKEQEAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
+ E++ I +++ R A+ V TL + + R + S +
Sbjct: 162 RTEKTEFSHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPSQA 208
>gi|168464757|ref|ZP_02698660.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418762479|ref|ZP_13318608.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418767621|ref|ZP_13323685.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770790|ref|ZP_13326811.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418775243|ref|ZP_13331203.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418778615|ref|ZP_13334523.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785331|ref|ZP_13341164.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418802768|ref|ZP_13358393.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419790111|ref|ZP_14315787.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419792549|ref|ZP_14318184.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|195632933|gb|EDX51387.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392614535|gb|EIW96982.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392618508|gb|EIX00908.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392734913|gb|EIZ92094.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392736515|gb|EIZ93678.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392737384|gb|EIZ94545.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392749041|gb|EJA06020.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392752428|gb|EJA09369.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392754822|gb|EJA11737.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392776165|gb|EJA32853.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|198245330|ref|YP_002218243.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|207859505|ref|YP_002246156.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|375004256|ref|ZP_09728591.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375121781|ref|ZP_09766948.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|421359976|ref|ZP_15810263.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421362197|ref|ZP_15812452.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421366400|ref|ZP_15816604.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372819|ref|ZP_15822966.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377523|ref|ZP_15827618.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421380236|ref|ZP_15830299.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421385587|ref|ZP_15835608.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421389187|ref|ZP_15839171.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393950|ref|ZP_15843893.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421399992|ref|ZP_15849883.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421402706|ref|ZP_15852563.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421407378|ref|ZP_15857186.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421414552|ref|ZP_15864292.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421416307|ref|ZP_15866027.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421420455|ref|ZP_15870132.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421427212|ref|ZP_15876836.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421430268|ref|ZP_15879861.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436232|ref|ZP_15885764.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421440740|ref|ZP_15890216.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445323|ref|ZP_15894749.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421886542|ref|ZP_16317716.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|436683459|ref|ZP_20517840.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436801388|ref|ZP_20524894.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436806916|ref|ZP_20527030.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436813153|ref|ZP_20531438.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839467|ref|ZP_20537772.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436850144|ref|ZP_20541202.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436859717|ref|ZP_20547603.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436866839|ref|ZP_20552268.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868761|ref|ZP_20553363.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436881039|ref|ZP_20560638.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436889926|ref|ZP_20565592.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436898247|ref|ZP_20570258.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436903750|ref|ZP_20574019.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436913189|ref|ZP_20578756.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436917607|ref|ZP_20581115.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925066|ref|ZP_20585540.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436937640|ref|ZP_20592767.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436944842|ref|ZP_20597252.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436948826|ref|ZP_20598980.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959119|ref|ZP_20603570.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436973412|ref|ZP_20610675.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436984538|ref|ZP_20614491.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436996759|ref|ZP_20619727.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437006345|ref|ZP_20622582.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437017251|ref|ZP_20626308.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437034876|ref|ZP_20633197.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041592|ref|ZP_20635552.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437047881|ref|ZP_20639156.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437060542|ref|ZP_20646388.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068896|ref|ZP_20650910.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077854|ref|ZP_20655712.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437083919|ref|ZP_20659486.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437089343|ref|ZP_20662139.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437105969|ref|ZP_20667109.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124542|ref|ZP_20673512.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437129006|ref|ZP_20675632.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137132|ref|ZP_20680200.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437144628|ref|ZP_20685099.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437151506|ref|ZP_20689313.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437163947|ref|ZP_20696925.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167498|ref|ZP_20698769.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437179221|ref|ZP_20705279.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185283|ref|ZP_20708879.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437204914|ref|ZP_20712246.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437259033|ref|ZP_20716933.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265377|ref|ZP_20720327.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437277969|ref|ZP_20727199.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437292113|ref|ZP_20731795.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437313045|ref|ZP_20736690.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437333513|ref|ZP_20742449.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437345483|ref|ZP_20746626.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437381236|ref|ZP_20750337.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437411894|ref|ZP_20753067.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437438721|ref|ZP_20756992.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437460370|ref|ZP_20761348.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437475582|ref|ZP_20766755.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437493203|ref|ZP_20771977.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437511435|ref|ZP_20777072.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437541575|ref|ZP_20782537.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437559095|ref|ZP_20785511.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437571419|ref|ZP_20788625.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437591229|ref|ZP_20794657.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437610736|ref|ZP_20801047.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622613|ref|ZP_20804786.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437642723|ref|ZP_20808171.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437663205|ref|ZP_20813816.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437685363|ref|ZP_20819129.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437687880|ref|ZP_20819591.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437705802|ref|ZP_20825174.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437736546|ref|ZP_20832737.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437805735|ref|ZP_20839269.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438088619|ref|ZP_20859909.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438103730|ref|ZP_20865538.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438109822|ref|ZP_20867673.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445139443|ref|ZP_21384320.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152960|ref|ZP_21391092.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445161898|ref|ZP_21393531.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445181615|ref|ZP_21398403.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445220536|ref|ZP_21403019.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445329013|ref|ZP_21413305.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445347670|ref|ZP_21419325.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445358139|ref|ZP_21422482.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|238690365|sp|B5FRM6.1|MUTL_SALDC RecName: Full=DNA mismatch repair protein MutL
gi|238690435|sp|B5R0N7.1|MUTL_SALEP RecName: Full=DNA mismatch repair protein MutL
gi|197939846|gb|ACH77179.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|206711308|emb|CAR35686.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326626048|gb|EGE32393.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|353073594|gb|EHB39359.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|379983938|emb|CCF89989.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|395983610|gb|EJH92802.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395990745|gb|EJH99875.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395991186|gb|EJI00311.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395998844|gb|EJI07870.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395999470|gb|EJI08491.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396004222|gb|EJI13205.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396015985|gb|EJI24854.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396016295|gb|EJI25163.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396017799|gb|EJI26663.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396025771|gb|EJI34545.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396030798|gb|EJI39527.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396031112|gb|EJI39840.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396035243|gb|EJI43916.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396044483|gb|EJI53079.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396045595|gb|EJI54187.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396052707|gb|EJI61213.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396053592|gb|EJI62086.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396056360|gb|EJI64835.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396065626|gb|EJI73999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396066233|gb|EJI74598.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|434958163|gb|ELL51739.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434968872|gb|ELL61598.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434975578|gb|ELL67866.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980086|gb|ELL72028.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434987459|gb|ELL79099.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434987803|gb|ELL79414.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434993971|gb|ELL85355.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435003401|gb|ELL94408.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435004561|gb|ELL95524.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435004960|gb|ELL95886.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|435006917|gb|ELL97776.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435013795|gb|ELM04417.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435017845|gb|ELM08322.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435024862|gb|ELM15067.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031449|gb|ELM21421.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435035204|gb|ELM25051.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435037933|gb|ELM27716.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435040431|gb|ELM30187.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435053604|gb|ELM43041.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435054911|gb|ELM44331.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435055164|gb|ELM44583.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435062159|gb|ELM51354.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435064178|gb|ELM53323.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435070493|gb|ELM59476.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435075716|gb|ELM64529.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435082335|gb|ELM70959.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435085858|gb|ELM74405.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435091280|gb|ELM79679.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435092860|gb|ELM81202.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435099459|gb|ELM87666.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435102466|gb|ELM90570.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435107003|gb|ELM95000.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435115490|gb|ELN03257.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435119476|gb|ELN07079.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435121148|gb|ELN08694.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435127266|gb|ELN14628.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435135151|gb|ELN22261.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435138627|gb|ELN25652.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435140521|gb|ELN27482.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435144407|gb|ELN31248.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435151272|gb|ELN37924.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435151650|gb|ELN38290.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435160065|gb|ELN46374.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435165697|gb|ELN51723.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435172035|gb|ELN57580.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177544|gb|ELN62860.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435181064|gb|ELN66146.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435182375|gb|ELN67388.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435187848|gb|ELN72591.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435190298|gb|ELN74892.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435202989|gb|ELN86779.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435203759|gb|ELN87496.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209560|gb|ELN92871.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435213024|gb|ELN95970.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435221634|gb|ELO03902.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435223448|gb|ELO05482.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435228340|gb|ELO09784.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435231320|gb|ELO12575.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435236236|gb|ELO16988.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435239516|gb|ELO20005.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435248490|gb|ELO28375.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435252166|gb|ELO31763.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435254823|gb|ELO34206.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435255398|gb|ELO34761.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435266630|gb|ELO45363.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435267221|gb|ELO45933.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435275564|gb|ELO53641.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435283144|gb|ELO60733.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435285279|gb|ELO62681.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435292444|gb|ELO69212.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435301818|gb|ELO77817.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435317293|gb|ELO90344.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435322746|gb|ELO94933.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435332295|gb|ELP03255.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444853279|gb|ELX78350.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444854077|gb|ELX79143.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444869058|gb|ELX93660.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444870645|gb|ELX95135.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444871590|gb|ELX96003.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444876921|gb|ELY01080.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444879330|gb|ELY03433.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444886319|gb|ELY10080.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|268682221|ref|ZP_06149083.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
gi|268622505|gb|EEZ54905.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
Length = 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|421542737|ref|ZP_15988843.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM255]
gi|402316656|gb|EJU52198.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM255]
Length = 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 85/366 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+ + DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIHVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD +Q+ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDGKQV--------FKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRAD 331
Query: 310 YTQSTS 315
T+S S
Sbjct: 332 LTESVS 337
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+ + DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIHVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-ATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|417362265|ref|ZP_12135953.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353581808|gb|EHC42642.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
Length = 632
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|417338293|ref|ZP_12120165.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353561895|gb|EHC28715.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
Length = 618
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|5107506|pdb|1BKN|A Chain A, Crystal Structure Of An N-Terminal 40kd Fragment Of E.
Coli Dna Mismatch Repair Protein Mutl
gi|5107507|pdb|1BKN|B Chain B, Crystal Structure Of An N-Terminal 40kd Fragment Of E.
Coli Dna Mismatch Repair Protein Mutl
Length = 352
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 58/342 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 6 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 65
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 66 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 123
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ ++I
Sbjct: 124 WQAYAEG------RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEI 177
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
+ R L NL L ++ GT AF
Sbjct: 178 IRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT--AFLEQALAIEWQHG 235
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 236 DLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 295
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 296 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 337
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 22 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 76
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 77 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVT 136
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+
Sbjct: 137 VKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 183
>gi|240014088|ref|ZP_04721001.1| DNA mismatch repair protein [Neisseria gonorrhoeae DGI18]
gi|240016522|ref|ZP_04723062.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA6140]
gi|240121649|ref|ZP_04734611.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID24-1]
gi|268601421|ref|ZP_06135588.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
gi|268585552|gb|EEZ50228.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
Length = 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQV----FKLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|392538104|ref|ZP_10285241.1| methyl-directed mismatch repair protein [Pseudoalteromonas marina
mano4]
Length = 610
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 44/329 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG+G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIEIERGGHKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K KT A++
Sbjct: 63 IGKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKTQDAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAEGRD-MAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFTHIDELIKRIALS 181
Query: 176 QYQPS------EKIVE--RA------CLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V RA + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAHAITRVAQVAGKAFAEQGLHIQSGEAGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + P + + +DP+ VDV
Sbjct: 240 VLPV--GSVNTTQYTYVNNRMMRDKLILHAIRQAFEEVSGVQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSML 296
NVHP KHEV F L D I++ ++ ++
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVV 326
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG+GI KE++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIEIERGGHKLIRIRDNGSGIGKEELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K KT A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPKTQDAAWQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS 482
K L+ E+ I +++ R A+ V TL + + R + +H+
Sbjct: 159 KFLRTEKTEFTHIDELIKRIALSRFDVSITLTHNEKVVRQYRAKTDPAHA 208
>gi|346306309|ref|ZP_08848467.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
gi|345900114|gb|EGX69942.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
Length = 687
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 165/318 (51%), Gaps = 41/318 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ +++IAAGEVI+RPA+ +KEL EN++DA +T++ V +K+GG+ ++I DNG
Sbjct: 3 KIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGITFMRIADNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ R +TSK+ EDL IS+ GFRGEAL+SI+ V+ + ++TKTK +
Sbjct: 63 GIDKEDVRAAFLRHSTSKIRSAEDLAHISSLGFRGEALSSIAAVSQVELLTKTKEAEFGV 122
Query: 126 RW------------------CTYLADLMALALMEMSQYLQ---RDKEQIGD-------KE 157
R+ T+L + ++L+ + +GD
Sbjct: 123 RYKIAGGKEESLEDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASHVGDLVTRLALSH 182
Query: 158 EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
+ +R + + V L S + ++ EIAS NL +E + + +TG+
Sbjct: 183 PEVSFRFINNGQVKLHTSGNGNLKDVIYHIYGREIAS--NL----IEVDFERKGIHITGY 236
Query: 218 I-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ N NF + ++ I + IE Y + + +PFV L L +D ++VD
Sbjct: 237 LGKPLISRGNRNFENYFVDGRYIKSSIISKAIEDGYKDFTMQHKYPFVVLYLDVDTEHVD 296
Query: 271 VNVHPTKHEVHFLHEDTI 288
VNVHPTK +V F ++ I
Sbjct: 297 VNVHPTKMDVRFNNQQEI 314
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ V +K+GG+ ++I DNG GI KED+ R +TSK+ EDL IS+ GFRGEA
Sbjct: 40 ATAVTVEIKEGGITFMRIADNGIGIDKEDVRAAFLRHSTSKIRSAEDLAHISSLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SI+ V+ + ++TKTK + R K ++ ++ GT + LFYN P RR
Sbjct: 100 LSSIAAVSQVELLTKTKEAEFGVRYKIAGGK-EESLEDAGAPDGTTFLIRQLFYNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E + + D+V+R A+ +P V F N + T+ N + +VI +IYG
Sbjct: 159 KFLKTAMTEASHVGDLVTRLALSHPEVSFRFI--NNGQVKLHTSGNGNLKDVIYHIYGRE 216
Query: 493 IS 494
I+
Sbjct: 217 IA 218
>gi|402310150|ref|ZP_10829118.1| DNA mismatch repair protein, C-terminal domain protein [Eubacterium
sp. AS15]
gi|400369392|gb|EJP22392.1| DNA mismatch repair protein, C-terminal domain protein [Eubacterium
sp. AS15]
Length = 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 174/334 (52%), Gaps = 42/334 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKLD+ +V I+AGEVI+ P + +KEL+ENS+D+K+TS+ V +K GG +++ DNG G
Sbjct: 5 IKKLDDNIVKLISAGEVIESPCSVVKELVENSIDSKATSVVVEIKNGGKSYIRVTDNGCG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-------- 118
I +E + ++ TTSK++ F+D +I T GFRGEALASIS VA +++ TKT
Sbjct: 65 IGEEYVIEAFKKHTTSKISTFDDFINIGTNGFRGEALASISAVAKISMTTKTADSNYGIT 124
Query: 119 ----------KTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHT 168
KT A T + + + + +L+ DK + G K R +
Sbjct: 125 VVMNNDKLLEKTKTGAKDGTTVIVEELLENVPARKNFLKSDKAE-GAKITDFLIR---YA 180
Query: 169 LV-PLMKSQYQPSEKIV----ERACLLEIASL-----NNLELLSVEGTDDAFQLKVTGWI 218
L P +K +Y + K V ++++ + + +++ V+ F L + G I
Sbjct: 181 LANPNIKIRYINNSKQVFATYATGKVIDVVDIIFGEKHGDKIIEVDEKLSDF-LSIRGII 239
Query: 219 TN--VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
N +S++KM + +F+N I + IE Y ++P G++P +L + + P VD
Sbjct: 240 GNNSAMYSSRKMQY-IFVNGRIIKDKNITAYIENSYKKFIPSGNYPLFFLDIIIKPSMVD 298
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN 304
VN+HP K EV F E I +++ + L N
Sbjct: 299 VNIHPNKLEVKFSEEKLIYSLIENAISNKLDNHN 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
+++TS+ V +K GG +++ DNG GI +E + ++ TTSK++ F+D +I T GFRG
Sbjct: 39 SKATSVVVEIKNGGKSYIRVTDNGCGIGEEYVIEAFKKHTTSKISTFDDFINIGTNGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASIS VA +++ TKT S + KL + K A + GT +I E+L N+P
Sbjct: 99 EALASISAVAKISMTTKTADSNYGITVVMNNDKLLEKTKTGAKD-GTTVIVEELLENVPA 157
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHV 459
R+ LK E KI D + RYA+ NP++
Sbjct: 158 RKNFLKSDKAEGAKITDFLIRYALANPNI 186
>gi|416085881|ref|ZP_11587292.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|416107802|ref|ZP_11590721.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348004839|gb|EGY45331.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348010073|gb|EGY50157.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
Length = 413
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 158/317 (49%), Gaps = 49/317 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M +Q +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------RDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 184 VERACL----LEIASLNNLELL-----------------SVEGTD---DAFQ-------L 212
+ R L + +N ++L ++ G D +A Q L
Sbjct: 175 IRRIALAKFHINFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGQDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ F+ + ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWVALPQFNRPQNDLNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 295 PNEVDVNVHPTKHEVRF 311
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ +K I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQSEAWQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
+ E++ I +V+ R A+ H+ FTL + L ++ V
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFHINFTLTHNGKVLRQYKSAV 203
>gi|261400853|ref|ZP_05986978.1| DNA mismatch repair protein MutL [Neisseria lactamica ATCC 23970]
gi|269209324|gb|EEZ75779.1| DNA mismatch repair protein MutL [Neisseria lactamica ATCC 23970]
Length = 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 169/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGEDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G +
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGEDF 216
>gi|293399028|ref|ZP_06643193.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62]
gi|291610442|gb|EFF39552.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62]
Length = 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|385323909|ref|YP_005878348.1| DNA mismatch repair protein MutL [Neisseria meningitidis 8013]
gi|261392296|emb|CAX49822.1| DNA mismatch repair protein MutL [Neisseria meningitidis 8013]
Length = 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 169/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|85859791|ref|YP_461993.1| DNA mismatch repair protein mutL [Syntrophus aciditrophicus SB]
gi|123738831|sp|Q2LUR5.1|MUTL_SYNAS RecName: Full=DNA mismatch repair protein MutL
gi|85722882|gb|ABC77825.1| DNA mismatch repair protein mutL [Syntrophus aciditrophicus SB]
Length = 616
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 173/340 (50%), Gaps = 37/340 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L ET+ +RIAAGEV++RPA+ +KELLEN+LD+ +T I V +++GG L+++ DNG+
Sbjct: 4 RIVLLPETLTHRIAAGEVVERPASIVKELLENALDSGATDINVELERGGCGLIRVADNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ +F+DL + +FGFRGEALASI+ ++ ++T+T
Sbjct: 64 GIFAQDVTLAFARHATSKIAEFDDLYRVRSFGFRGEALASIASISRTELVTRTADDLAGM 123
Query: 126 RWCTYLADLM-----------ALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMK 174
R ++ ++ + + + K+ + + ++ Y T + L
Sbjct: 124 RIVVEGGNICEKTEAGCPIGTSITVSRIFDSVPVRKKFLKAEATERAYCLDVITRLSLAN 183
Query: 175 SQ--------------YQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITN 220
+ Y + ++ ER L+ + + + L +EG D +++VTG+ +
Sbjct: 184 PEVRIRVFSKGRELCHYPATSRLSERVALV-LGNADADRLQPIEGETD--RVRVTGFASR 240
Query: 221 VNF--STKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVN 272
+F +T + + F+N + + + Y + +P V L + +DP +VDVN
Sbjct: 241 PDFTCATTRQIY-TFVNRRHVRDHLLNHAVMTAYRRVIEPRRYPAVVLYVDLDPADVDVN 299
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
VHP K EV F T+ E V L L G S + T+
Sbjct: 300 VHPAKLEVRFRQPRTVYEAVVEALSGMLRGMGQSALSLTR 339
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 281 HFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
H + ++ER S++++ L + +T I V +++GG L+++ DNG+GI +
Sbjct: 14 HRIAAGEVVERPASIVKELL-----ENALDSGATDINVELERGGCGLIRVADNGSGIFAQ 68
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYI 400
D+ + R TSK+ +F+DL + +FGFRGEALASI+ ++ ++T+T R
Sbjct: 69 DVTLAFARHATSKIAEFDDLYRVRSFGFRGEALASIASISRTELVTRTADDLAGMRIVVE 128
Query: 401 DSKLKDPIKPCAGNQ-GTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
+ + K AG GT I +F ++P R+K LK + E DV++R ++ NP V
Sbjct: 129 GGNICE--KTEAGCPIGTSITVSRIFDSVPVRKKFLKAEATERAYCLDVITRLSLANPEV 186
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ + L S SE + + GN + R+
Sbjct: 187 RIRVFSKGRELC--HYPATSRLSERVALVLGNADADRL 222
>gi|421559470|ref|ZP_16005343.1| DNA mismatch repair protein mutL [Neisseria meningitidis 92045]
gi|254670262|emb|CBA05521.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha153]
gi|402335269|gb|EJU70535.1| DNA mismatch repair protein mutL [Neisseria meningitidis 92045]
Length = 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 82/351 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+ + DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIHVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+ + DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIHVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-ATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|166031821|ref|ZP_02234650.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC
27755]
gi|166028274|gb|EDR47031.1| DNA mismatch repair domain protein [Dorea formicigenerans ATCC
27755]
Length = 698
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 165/318 (51%), Gaps = 41/318 (12%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ +++IAAGEVI+RPA+ +KEL EN++DA +T++ V +K+GG+ ++I DNG
Sbjct: 3 KIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGITFMRIADNGI 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ R +TSK+ EDL IS+ GFRGEAL+SI+ V+ + ++TKTK +
Sbjct: 63 GIDKEDVRAAFLRHSTSKIRSAEDLAHISSLGFRGEALSSIAAVSQVELLTKTKEADFGV 122
Query: 126 RW------------------CTYLADLMALALMEMSQYLQ---RDKEQIGD-------KE 157
R+ T+L + ++L+ + +GD
Sbjct: 123 RYKIAGGKEESLEDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASHVGDLVTRLALSH 182
Query: 158 EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
+ +R + + V L S + ++ EIAS NL +E + + +TG+
Sbjct: 183 PEVSFRFINNGQVKLHTSGNGNLKDVIYHIYGREIAS--NL----IEVDFERKGIHITGY 236
Query: 218 I-------TNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
+ N NF + ++ I + IE Y + + +PFV L L +D ++VD
Sbjct: 237 LGKPLISRGNRNFENYFVDGRYIKSSIISKAIEDGYKDFTMQHKYPFVVLYLDVDTEHVD 296
Query: 271 VNVHPTKHEVHFLHEDTI 288
VNVHPTK +V F ++ I
Sbjct: 297 VNVHPTKMDVRFNNQQEI 314
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ V +K+GG+ ++I DNG GI KED+ R +TSK+ EDL IS+ GFRGEA
Sbjct: 40 ATAVTVEIKEGGITFMRIADNGIGIDKEDVRAAFLRHSTSKIRSAEDLAHISSLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+SI+ V+ + ++TKTK + R K ++ ++ GT + LFYN P RR
Sbjct: 100 LSSIAAVSQVELLTKTKEADFGVRYKIAGGK-EESLEDAGAPDGTTFLIRQLFYNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K LK E + + D+V+R A+ +P V F N + T+ N + +VI +IYG
Sbjct: 159 KFLKTAMTEASHVGDLVTRLALSHPEVSFRFI--NNGQVKLHTSGNGNLKDVIYHIYGRE 216
Query: 493 IS 494
I+
Sbjct: 217 IA 218
>gi|444334367|ref|ZP_21149931.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|443550507|gb|ELT58774.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutL
[Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 615
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 49/317 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M +Q +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------RDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 184 VERACL----LEIASLNNLELL-----------------SVEGTD---DAFQ-------L 212
+ R L + +N ++L ++ G D +A Q L
Sbjct: 175 IRRIALAKFHINFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGEDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ F+ + F ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWVALPQFNRPQNDFNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHF 282
P VDVNVHPTKHEV F
Sbjct: 295 PNEVDVNVHPTKHEVRF 311
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGAGLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ +K I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQSEAWQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
+ E++ I +V+ R A+ H+ FTL + L ++ V
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFHINFTLTHNGKVLRQYKSAV 203
>gi|419797474|ref|ZP_14322950.1| DNA mismatch repair protein MutL [Neisseria sicca VK64]
gi|385698013|gb|EIG28407.1| DNA mismatch repair protein MutL [Neisseria sicca VK64]
Length = 664
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 162/348 (46%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q A LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGEDFQ--------AASLEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G +
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGEDF 216
>gi|422325708|ref|ZP_16406736.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
gi|371667456|gb|EHO32581.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
Length = 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 166/337 (49%), Gaps = 57/337 (16%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I +LDE + N IAAGEV++RP +KEL+EN +DA +++I++ + QGG+ + I D+G
Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS---- 121
G+ ED + ER TSKL + DL +I T GFRGEAL SI+ V+H+ + T T+
Sbjct: 63 GMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTTSTEV 122
Query: 122 -----------PCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLV 170
PC T ++E+ Q+ + + Q+ E +L+
Sbjct: 123 EINYGKLISARPCGTPKGT---------MIEIQNLFQKTPARFKHLKSPQY----EFSLI 169
Query: 171 PLMKSQYQPSEKIV-------ERACLLEIASLNNLELL-------------SVEGTDDAF 210
+ ++ S + R S N LE+L S++G+D +
Sbjct: 170 SDVVQKFALSHPEIGFCLSHDGRTVFKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQDY 229
Query: 211 QLKVTGWITNVNFS-TKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLC 263
++K G+I F+ K LL+IN+ +++ I YS Y+PK +P V + L
Sbjct: 230 KIK--GYIMQPQFNRATKYYMLLYINDRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLL 287
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
MD + VDVNVHP+K E+ E + + + + K L
Sbjct: 288 MDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKAL 324
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER Q ++++ + +++I++ + QGG+ + I D+G G+ ED + E
Sbjct: 20 VVERPQGIVKELV-----ENCIDAHASNIEIQISQGGIATITIIDDGDGMDPEDATLAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL + DL +I T GFRGEAL SI+ V+H+ + T T+ +Y KL
Sbjct: 75 RHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTTSTEVEINY--GKLISA 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+PC +GT I ++LF P R K LK P E++ I+DVV ++A+ +P +GF L
Sbjct: 133 -RPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSHPEIGFCLSHDG 191
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+ +T + + EV+ IYG + ++ + Q
Sbjct: 192 RTV--FKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQ 227
>gi|227484986|ref|ZP_03915302.1| DNA mismatch repair protein MutL [Anaerococcus lactolyticus ATCC
51172]
gi|227236983|gb|EEI86998.1| DNA mismatch repair protein MutL [Anaerococcus lactolyticus ATCC
51172]
Length = 587
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 173/326 (53%), Gaps = 31/326 (9%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKLD+ V +IAAGEVI+ P + +KEL+ENS+DA S +I V +K GG +++ D+G+G
Sbjct: 3 IKKLDKETVEKIAAGEVIESPLSIIKELVENSVDAGSKNITVEIKNGGKTYIRVTDDGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTII----------- 115
I K+D+++ E+ TSK+T+F+DL IS+ GFRGEAL SI+ V+ + I
Sbjct: 63 IAKDDIELAFEKHATSKITKFDDLFKISSLGFRGEALPSIASVSKVVAISKTQDADVGTK 122
Query: 116 ------TKTKTSPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQW-----YRT 164
K K S + + + + + + ++L+ D + + + Y+
Sbjct: 123 LDLSGRVKVKKSIATNKGTSIIVEDLFYNMPARRKFLKSDIAESNKITKLMYAFAIGYKD 182
Query: 165 VEHTLVPLMKSQYQPSEKI-VERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNF 223
V + + Q+Q + + ++ + +L LL ++ T+ ++++ +
Sbjct: 183 VSFKYIKDDRIQFQSNTSLDLKFKISDLLDNLLEENLLELKATNTSYRIDGEIGLPTYYR 242
Query: 224 STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
+ M ++ F+N+ I + IE+ Y +P+G FP ++ + DPKN+DVN+HP K
Sbjct: 243 GNRSMQYI-FVNDRLIEDEEITKTIERQYIGLIPQGRFPVFFIFIYTDPKNIDVNIHPNK 301
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGS 303
V + +ED ++E + + K LL S
Sbjct: 302 KLVKYTYEDELVELINDSV-KNLLKS 326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S +I V +K GG +++ D+G+GI K+D+++ E+ TSK+T+F+DL IS+ GFRGEA
Sbjct: 39 SKNITVEIKNGGKTYIRVTDDGSGIAKDDIELAFEKHATSKITKFDDLFKISSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI+ V+ + I+KT+ + + + ++K K A N+GT II EDLFYN+P RR
Sbjct: 99 LPSIASVSKVVAISKTQDADVGTKLD-LSGRVKVK-KSIATNKGTSIIVEDLFYNMPARR 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
K LK E NKI ++ +A+ V F K +
Sbjct: 157 KFLKSDIAESNKITKLMYAFAIGYKDVSFKYIKDD 191
>gi|313668557|ref|YP_004048841.1| DNA mismatch repair protein [Neisseria lactamica 020-06]
gi|313006019|emb|CBN87478.1| DNA mismatch repair protein [Neisseria lactamica 020-06]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATEIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 SGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSAHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K + + + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQNLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 119/213 (55%), Gaps = 7/213 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATEIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRT-NVNSSHSEVIGNIY 489
H+ F+LK+ + + + N++ + ++G+ +
Sbjct: 184 HIAFSLKRDGKQVFKLPAQNLHERIAAIVGDDF 216
>gi|59801161|ref|YP_207873.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA 1090]
gi|268603752|ref|ZP_06137919.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
gi|81311203|sp|Q5F8M6.1|MUTL_NEIG1 RecName: Full=DNA mismatch repair protein MutL
gi|59718056|gb|AAW89461.1| putative DNA mismatch repair protein [Neisseria gonorrhoeae FA
1090]
gi|268587883|gb|EEZ52559.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|291043745|ref|ZP_06569461.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2]
gi|291012208|gb|EFE04197.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|450254800|ref|ZP_21902649.1| DNA mismatch repair protein, partial [Escherichia coli S17]
gi|449313100|gb|EMD03327.1| DNA mismatch repair protein, partial [Escherichia coli S17]
Length = 421
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 58/342 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
+ R L NL L ++ GT AF
Sbjct: 175 IRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT--AFLEQALAIEWQHG 232
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 233 DLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180
>gi|325266000|ref|ZP_08132686.1| DNA mismatch repair protein MutL [Kingella denitrificans ATCC
33394]
gi|324982638|gb|EGC18264.1| DNA mismatch repair protein MutL [Kingella denitrificans ATCC
33394]
Length = 623
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 158/329 (48%), Gaps = 34/329 (10%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPA ALKE++ENSLDA +T I V + GG+KL+++ DNG
Sbjct: 3 RIHALPDHLVNQIAAGEVVERPAAALKEIVENSLDAGATHISVELAGGGIKLIRVTDNGN 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ Q DL + + GFRGE LASI+ V+ LT+ ++T P A+
Sbjct: 63 GIHADDLPLALSRHATSKIKQLHDLEHVRSMGFRGEGLASIASVSRLTLTSRTADLPHAH 122
Query: 126 RWCT---YLADLMALALMEMSQ------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQ 176
L+ + A A E + + + K E Y L L +
Sbjct: 123 EIRAEDGVLSAVNAAAHPEGTTVEVRELFFNTPARRKFLKSENTEYAHCAAMLERLALAN 182
Query: 177 YQ---------------PSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNV 221
Q P + + ER + A + L V+ + A ++V G+++
Sbjct: 183 PQAAFSLAHNGKTVFRYPVQSLEERMAAVMGAEFQSAS-LPVDSGEGA--VRVHGFVSKP 239
Query: 222 NFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVH 274
F+ K F+N R ++Q Y L P L L M P+ VDVNVH
Sbjct: 240 TFAKGKSELQFCFVNRRFVRDKVVLHAVKQAYRDVLHHKITPAFALFLEMPPEMVDVNVH 299
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
PTK E+ F + V L+K L G+
Sbjct: 300 PTKTEIRFRDSQAVHRLVFHTLDKALEGT 328
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T I V + GG+KL+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPAAALKEIVENS-----LDAGATHISVELAGGGIKLIRVTDNGNGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ Q DL + + GFRGE LASI+ V+ LT+ ++T P A+
Sbjct: 65 HADDLPLALSRHATSKIKQLHDLEHVRSMGFRGEGLASIASVSRLTLTSRTADLPHAHEI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D L + A +GT + +LF+N P RRK LK + EY A ++ R A+ NP
Sbjct: 125 RAEDGVL-SAVNAAAHPEGTTVEVRELFFNTPARRKFLKSENTEYAHCAAMLERLALANP 183
Query: 458 HVGFTL 463
F+L
Sbjct: 184 QAAFSL 189
>gi|315634031|ref|ZP_07889320.1| DNA mismatch repair protein MutL [Aggregatibacter segnis ATCC
33393]
gi|315477281|gb|EFU68024.1| DNA mismatch repair protein MutL [Aggregatibacter segnis ATCC
33393]
Length = 616
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 53/344 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA + IQ+ ++ GG L++I+DNG G
Sbjct: 3 IRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGASLIRIRDNGIG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M +Q +G E ++ T + K+++ +++
Sbjct: 121 WQVYAQG------RDMETTIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEV 174
Query: 184 VERACLLEI------------------ASLNNLELLSVEGT--DDAFQ-----------L 212
+ R L + A N +L V DD Q L
Sbjct: 175 IRRIALAKFNINFTLTHNGKVLRQYKSAVTNEQKLKRVAAICGDDFIQNALQIDWKHDDL 234
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
++GW+ +F + ++N + R I Q Y+ YL +P L + ++
Sbjct: 235 HLSGWVAMPHFHRPQNDLNYCYVNGRMVRDKIITHAIRQAYADYLTNEQYPAFVLFIDLN 294
Query: 266 PKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGSNT 305
P ++DVNVHPTKHEV F L D I + + + L + NT
Sbjct: 295 PNDIDVNVHPTKHEVRFQQSRLVHDFITQGISNALASEPIPLNT 338
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
IQ+ ++ GG L++I+DNG GI KE++ + R TSK+ DL +I + GFRGEALAS
Sbjct: 42 IQIDIENGGASLIRIRDNGIGIAKEELALALARHATSKIADLADLEAILSLGFRGEALAS 101
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
IS V+ LT+ ++T A++ ++ I+P + GT + +LF+N P RRK L
Sbjct: 102 ISSVSRLTLTSRTAEQNEAWQVYAQGRDMETTIQPASHPVGTTVEVANLFFNTPARRKFL 161
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV-NSSHSEVIGNIYGNNI 493
+ E++ I +V+ R A+ ++ FTL + L ++ V N + + I G++
Sbjct: 162 RSEKTEFSHIDEVIRRIALAKFNINFTLTHNGKVLRQYKSAVTNEQKLKRVAAICGDDF 220
>gi|340001704|ref|YP_004732588.1| DNA mismatch repair protein [Salmonella bongori NCTC 12419]
gi|339515066|emb|CCC32844.1| DNA mismatch repair protein [Salmonella bongori NCTC 12419]
Length = 618
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTFNLSHNGKLIRQYRAVAKDGQKERRLGTICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + ++N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+ V F L
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTFNLSHNG 193
Query: 468 ENLADIRTNVNSSHSE-VIGNIYG 490
+ + R E +G I G
Sbjct: 194 KLIRQYRAVAKDGQKERRLGTICG 217
>gi|258625638|ref|ZP_05720519.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582093|gb|EEW06961.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 384
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG+G
Sbjct: 3 IRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T T A
Sbjct: 63 VDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHT 168
W Y +M+ LQ +G + EK + ++
Sbjct: 121 WSAYSEG------RDMAVKLQPAAHPVGTTVEVLDLFFNAPARRKFLRTEKTEFTHIDEL 174
Query: 169 LVPL----------------MKSQYQPSEKIVERACLLEIASLNNL--ELLSVEGTDDAF 210
L + M QY+ + + ++ L N +L +E
Sbjct: 175 LKRIALSRFDVSFTLRHNGKMVRQYRAANTLPQQEKRLAAVCGNPFVQHMLRIELEHQG- 233
Query: 211 QLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
LK+ GWIT + ++ ++N + R I Q Y L F L +
Sbjct: 234 -LKLHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIE 292
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 293 LDPHQVDVNVHPAKHEVRF 311
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + +++GG KL++I+DNG+G+ K+++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ATRIDIDIEKGGAKLIRIRDNGSGVDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T T A+ A + ++P A GT + DLF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTVTQEEAWSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNAPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR-TNVNSSHSEVIGNIYGN 491
K L+ E+ I +++ R A+ V FTL+ + + R N + + + GN
Sbjct: 159 KFLRTEKTEFTHIDELLKRIALSRFDVSFTLRHNGKMVRQYRAANTLPQQEKRLAAVCGN 218
>gi|254805223|ref|YP_003083444.1| DNA mismatch repair protein [Neisseria meningitidis alpha14]
gi|254668765|emb|CBA06657.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha14]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 171/366 (46%), Gaps = 85/366 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 62 SGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
L P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRAD 331
Query: 310 YTQSTS 315
T+S S
Sbjct: 332 LTESVS 337
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ S A +
Sbjct: 65 HPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|357404925|ref|YP_004916849.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
gi|351717590|emb|CCE23255.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
Length = 605
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 49/318 (15%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L +VN+IAAGEV++RP++ +KEL+EN DA +TS+ + ++QGG++ ++I+D+G
Sbjct: 2 RIHSLPTQLVNQIAAGEVVERPSSVVKELVENCFDAGATSVAIEIEQGGMRRIKIRDDGC 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ + R TSK+ +DL +ST GFRGEAL SIS VA LT+I++T+ +
Sbjct: 62 GIDKDDLPLALSRHATSKIATLDDLEHVSTMGFRGEALPSISSVARLTLISRTEAAD--- 118
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIG---DKEEKQWYRTVEHTLVPLMKSQYQPSEK 182
C + D E + + D G D + + + K+++ E
Sbjct: 119 --CAWRVDADG---SEQNFDPKPDPHPQGTTVDVRDLFYNTPARRKFLKTEKTEFGHIET 173
Query: 183 IVERACL-----------------------------LEIASLNNLELL--SVEGTDDAFQ 211
+++R L IA + E + SV+ +A
Sbjct: 174 LIKRMALSRFDIGFALTHNQREVLNLKPVTTEVQREQRIAGICGSEFIDNSVKIDFEASG 233
Query: 212 LKVTGWITNVNFSTKKMTFLLFINNP-------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L++TGW+ FS + F N + ++Q Y L G P L L +
Sbjct: 234 LQLTGWVGLPTFSRSQQDMQFFYVNGRLIKDKLVSHAVKQAYQDVLYHGRHPVFVLYLNL 293
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVN HP K EV F
Sbjct: 294 DPALVDVNAHPAKLEVRF 311
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + F +TS+ + ++QGG++ ++I+D+G GI K+D+ +
Sbjct: 19 VVERPSSVVKELV-----ENCFDAGATSVAIEIEQGGMRRIKIRDDGCGIDKDDLPLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +ST GFRGEAL SIS VA LT+I++T+ + CA+R S+
Sbjct: 74 RHATSKIATLDDLEHVSTMGFRGEALPSISSVARLTLISRTEAADCAWRVDADGSEQNFD 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL---K 464
KP QGT + DLFYN P RRK LK E+ I ++ R A+ +GF L +
Sbjct: 134 PKPDPHPQGTTVDVRDLFYNTPARRKFLKTEKTEFGHIETLIKRMALSRFDIGFALTHNQ 193
Query: 465 KQNENLADIRTNV 477
++ NL + T V
Sbjct: 194 REVLNLKPVTTEV 206
>gi|219944613|gb|ACL55048.1| MutL [Salmonella enterica subsp. enterica serovar Heidelberg str.
B182]
Length = 618
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 58/340 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------------------ELLSVEGTDDAF 210
+ R L NL + L++E
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 211 QLKVTGWITNVNFSTKKMTFLLF--INNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L+ GW+ + N +T +T + + +N + R I Q L P L L
Sbjct: 235 TLR--GWVADPNHTTTALTEIQYCHVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEK 298
+DP VDVNVHP KHEV F L D I + V S+L++
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ 332
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|312127452|ref|YP_003992326.1| DNA mismatch repair protein mutl [Caldicellulosiruptor
hydrothermalis 108]
gi|311777471|gb|ADQ06957.1| DNA mismatch repair protein MutL [Caldicellulosiruptor
hydrothermalis 108]
Length = 588
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 173/339 (51%), Gaps = 43/339 (12%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
KL E + + +AAGEV++RPA+ LKELLENS+DA ++ I V +++GG+K +++ DNG GI
Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGIKRIEVYDNGKGIH 65
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK----------- 117
+D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K
Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125
Query: 118 ------TKTSPCAYRWCTYLA--DLM-----ALALMEMSQYLQRDKEQIGDKEEKQWYRT 164
S C ++ T + D+ L ++ Q+ ++ +K W
Sbjct: 126 VEGGKVISKSLCPFKEGTRIVVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLS--VEGTDDAFQLKVTGWITNVN 222
+ + P + +E I S+ +E++ VE + + LKV G+ N
Sbjct: 186 SFRAEADGKRQIFTPGDNKIESV----IGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPT 241
Query: 223 FS-TKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
S + + ++N + I++ + + G FP V+L + + P +DVNVHP
Sbjct: 242 VSRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFIQIPPSEIDVNVHP 301
Query: 276 TKHEVHFLHE----DTIIERVQSML--EKTLLGSNTSRV 308
+K E+ F E +TI + + L EK + ++ S+V
Sbjct: 302 SKLEIKFRDERFVYNTIYKAIADSLKSEKMIPKADLSKV 340
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 18/231 (7%)
Query: 281 HFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
H L ++ER S L++ L S + ++ I V +++GG+K +++ DNG GI +
Sbjct: 13 HILAAGEVVERPASCLKELLENSIDA-----GASLIDVKIEKGGIKRIEVYDNGKGIHPD 67
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK--TKTSPCAYR-- 396
D++ V ER TTSK+ FED+ SI T GFRGEAL +IS VA +T+++K + C +
Sbjct: 68 DIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVKVE 127
Query: 397 -ASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVH 455
I L C +GT+I+ ED+FYN P R K LK PS E +VV + A+
Sbjct: 128 GGKVISKSL------CPFKEGTRIVVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIA 181
Query: 456 NPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
P + F + + + I T ++ VIG+I+G I + + FS +S
Sbjct: 182 WPEISF--RAEADGKRQIFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKES 230
>gi|344199651|ref|YP_004783977.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
gi|343775095|gb|AEM47651.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
Length = 597
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 42/318 (13%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
DQ P++ +LD T+ N+IAAGEV++RPA+ LKELLENSLDA +T I + ++ GG+ LL ++
Sbjct: 4 DQTPRVHRLDSTLANQIAAGEVVERPASILKELLENSLDAGATRITIHLEGGGVDLLSVE 63
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
D+G GI D+ + ER TSK+ +EDL +I T GFRGEAL +I+ V+ L I+++
Sbjct: 64 DDGVGIFPADLALAMERHATSKVATWEDLQAIHTMGFRGEALPAIASVSRLEIVSRAHGQ 123
Query: 122 PCAYRW-------------------CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWY 162
A R +ADL + ++L+ ++ ++
Sbjct: 124 KQATRLQVTGGATGAPEPSGRAPGTTVRVADLF-FNVPARRKFLRSASAEL--SRNQKVL 180
Query: 163 RTVEHTLVPLMKSQYQPSEKIVERACLLE-------IASLNNLELLS----VEGTDDAFQ 211
R + P+ +Q +V+ L+ +AS+ L+ +E D
Sbjct: 181 RQIALANFPVAFQLFQNGRALVQLPAALDADSRAQRVASIMGEGFLANALYIEQEDQG-- 238
Query: 212 LKVTGWITNVNFSTKKMTFLLF------INNP-IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L ++GW+ ++ + F + +P I + Y+ L + P L L +
Sbjct: 239 LSLSGWLGLPTYNRARGDEQYFYVNSRPVRDPVITHALRASYNDVLFQDRHPLYVLYLKL 298
Query: 265 DPKNVDVNVHPTKHEVHF 282
P+ VDVNVHP K EV F
Sbjct: 299 PPERVDVNVHPAKAEVRF 316
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+L++ L S +T I + ++ GG+ LL ++D+G GI D+ + E
Sbjct: 25 VVERPASILKELLENS-----LDAGATRITIHLEGGGVDLLSVEDDGVGIFPADLALAME 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +EDL +I T GFRGEAL +I+ V+ L I+++ A R P
Sbjct: 80 RHATSKVATWEDLQAIHTMGFRGEALPAIASVSRLEIVSRAHGQKQATRLQVTGGATGAP 139
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+P GT + DLF+N+P RRK L+ S E ++ V+ + A+ N V F L +
Sbjct: 140 -EPSGRAPGTTVRVADLFFNVPARRKFLRSASAELSRNQKVLRQIALANFPVAFQLFQNG 198
Query: 468 ENLADIRTNVNS-SHSEVIGNIYGNNI 493
L + +++ S ++ + +I G
Sbjct: 199 RALVQLPAALDADSRAQRVASIMGEGF 225
>gi|347539107|ref|YP_004846532.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
gi|345642285|dbj|BAK76118.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
Length = 629
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 159/319 (49%), Gaps = 44/319 (13%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPA+ALKE+LENSLDA + I V + QGG+KL+++ DNG+
Sbjct: 3 RIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + +R TSK+ DL S++T GFRGE LASI+ V+ LT+I++ A+
Sbjct: 63 GIVPDDLPLALDRHATSKIASLADLESVATLGFRGEGLASIASVSRLTLISRPHDEAHAH 122
Query: 126 RWCTYLADLMALALMEMSQYLQRDKEQIGD------------KEEKQWYRTVEHTL--VP 171
+ +A AL +E + + ++ D K E Y T +
Sbjct: 123 Q---IIAIDGALHPVEPAAHAPGTSVEVVDLYFNTPARRKFLKGENTEYAHCAATFERIA 179
Query: 172 LMKSQYQ-------------PSEKIVERACLLEIASLNNLELL--SVEGTDDAFQLKVTG 216
L Q + P++ + ER + +L + + ++ +A L++ G
Sbjct: 180 LAHPQVEFLLRHNGKAVWRLPAQSLAER-----VGALLGKDFVEAALPLETNAGGLQLAG 234
Query: 217 WITNVNFS-TKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNV 269
++ + +S + ++N R + Q Y L P L L +DP V
Sbjct: 235 FVASPTYSKASRDAQYFYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFLTIDPAGV 294
Query: 270 DVNVHPTKHEVHFLHEDTI 288
DVNVHPTK EV F I
Sbjct: 295 DVNVHPTKIEVRFRESQAI 313
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER S L++ L S + I V + QGG+KL+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPASALKEMLENS-----LDAGADRITVDLAQGGIKLIRVTDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + +R TSK+ DL S++T GFRGE LASI+ V+ LT+I++ A++
Sbjct: 65 VPDDLPLALDRHATSKIASLADLESVATLGFRGEGLASIASVSRLTLISRPHDEAHAHQI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
ID L P++P A GT + DL++N P RRK LK + EY A R A+ +P
Sbjct: 125 IAIDGALH-PVEPAAHAPGTSVEVVDLYFNTPARRKFLKGENTEYAHCAATFERIALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
V F L+ + + + S +E +G + G +
Sbjct: 184 QVEFLLRHNGKAVWRLPAQ---SLAERVGALLGKDF 216
>gi|395230101|ref|ZP_10408409.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|424733302|ref|ZP_18161867.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
gi|394716395|gb|EJF22150.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|422892490|gb|EKU32349.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
Length = 623
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 54/340 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENS+DA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ P A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL----------ELLSVEGTDDAFQLKVTG----------------- 216
+ R L NL ++V+G + + G
Sbjct: 175 IRRIALARFDVTINLSHNGKVVRQYRAVAVDGQKERRLGAICGTPFLEHALAIEWQHGDL 234
Query: 217 ----WITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
W+ + N +T + + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 295 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----IDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ P A++A +
Sbjct: 74 RHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+ V L
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTINLSHNG 193
Query: 468 ENLADIRT-NVNSSHSEVIGNIYG 490
+ + R V+ +G I G
Sbjct: 194 KVVRQYRAVAVDGQKERRLGAICG 217
>gi|340756899|ref|ZP_08693503.1| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725]
gi|340578054|gb|EES62729.2| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725]
Length = 640
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 215/462 (46%), Gaps = 65/462 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LDE+V N IAAGEV++ PA+ LKELLENSLDA+S SI++ V+ GG ++ I D+G G
Sbjct: 4 IKVLDESVSNIIAAGEVVENPASMLKELLENSLDAESKSIKIEVRSGGRHVI-ISDDGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ ++D+ + ER TSK+ + EDL ++ T+GFRGEAL+SIS V+ +T+ ++TK
Sbjct: 63 MTQDDLLLSVERHATSKIAKKEDLYNLFTYGFRGEALSSISAVSKMTLSSRTKDDETGSA 122
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDK-EEKQWYRTVEHTLVPLMK--SQYQPSEKI 183
+ L + +QR+ +G E K + L L K ++Y + I
Sbjct: 123 ITVSGGKITGL------KEIQRN---VGTTIEIKDLFFNTPARLKFLRKTTTEYMNIKDI 173
Query: 184 VERACLLEIASLNNLELLSVEGTDDAFQLKVT-------------------------GWI 218
+ + L + L L DD +K T G++
Sbjct: 174 IVQEALGNPNTAITLIL------DDKVSIKTTGNGIDNTIVEIFGRNVLKNSKPFSMGYL 227
Query: 219 TNVN-FSTKKMTFLLFINNPI--KRMIEQV----YSIYLPKGSFPFVYLSLCMDPKNVDV 271
N + + + + F+N + +++E Y L KG +PF L L +DPK VDV
Sbjct: 228 GNASLYRATRDSIFTFVNGRMVKSKLLENAIIDGYYTKLMKGKYPFAILFLEIDPKEVDV 287
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQ 331
NVHP+K V F +E I RV ++ G + +F S +++ T ++ L+
Sbjct: 288 NVHPSKKIVKFSNESNIYGRVLKEIKNCFEGDD---IFV--SPTMEKTFEKENEALIDFS 342
Query: 332 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 391
+ + + +I E K + E +S + E S I K +T+
Sbjct: 343 EFSKFVPMKAENIKFEGIEVEKYPKTEREAEVSDRDIKKETTESNEDNFEKIFIEKGRTT 402
Query: 392 PCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRK 433
P ++K+ IK GN+ + II D+ + + K
Sbjct: 403 PF---------EIKEEIKVFEGNEKSDIIKTDVVSEVKSEFK 435
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 10/214 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++E SML++ L S +S SI++ V+ GG ++ I D+G G+ ++D+ + E
Sbjct: 20 VVENPASMLKELLENS-----LDAESKSIKIEVRSGGRHVI-ISDDGKGMTQDDLLLSVE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL ++ T+GFRGEAL+SIS V+ +T+ ++TK + K+
Sbjct: 74 RHATSKIAKKEDLYNLFTYGFRGEALSSISAVSKMTLSSRTKDDETGSAITVSGGKIT-G 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+K N GT I +DLF+N P R K L++ + EY I D++ + A+ NP+ TL +
Sbjct: 133 LKEIQRNVGTTIEIKDLFFNTPARLKFLRKTTTEYMNIKDIIVQEALGNPNTAITLILDD 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ I+T N + ++ I+G N+ + + FS
Sbjct: 193 K--VSIKTTGNGIDNTIV-EIFGRNVLKNSKPFS 223
>gi|416203322|ref|ZP_11620050.1| DNA mismatch repair protein MutL [Neisseria meningitidis 961-5945]
gi|325142632|gb|EGC65023.1| DNA mismatch repair protein MutL [Neisseria meningitidis 961-5945]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 78/349 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 62 SGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ S A +
Sbjct: 65 HPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|254509325|ref|ZP_05121415.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus 16]
gi|219547754|gb|EED24789.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus 16]
Length = 652
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 168/356 (47%), Gaps = 60/356 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLD+ +T I + +++GG KL++++DNG G
Sbjct: 3 IKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS VA LT+ ++ T A
Sbjct: 63 IVKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVARLTMTSRPATQEQA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y EM+ LQ IG E ++ T + K+++ +++
Sbjct: 121 WSAYTEG------REMAVKLQPTAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIDEL 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
++R L NL + +V G+ AF
Sbjct: 175 IKRIALSRFDVTINLRHNGKMIKQYRAAKTEVQAEKRIATVCGS--AFVRNMLKIELEHQ 232
Query: 211 QLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
LK+ GWIT + ++ ++N + R I Q Y L F L +
Sbjct: 233 GLKLHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPEQFATYVLFIE 292
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSN-------TSRVFYTQ 312
+DP VDVNVHP KHEV F + + + L L S T+ F+TQ
Sbjct: 293 LDPHQVDVNVHPAKHEVRFHQARLVHDFIYQALSDALAQSAHIDKPEITASAFHTQ 348
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + +T I + +++GG KL++++DNG GI K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDSGATRIDIDIEKGGAKLIRVRDNGKGIVKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS VA LT+ ++ T A+ A ++
Sbjct: 74 RHATSKIHTLDDLEAIISLGFRGEALASISSVARLTMTSRPATQEQAWSAYTEGREMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ I +++ R A+ V L+
Sbjct: 134 LQPTAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIDELIKRIALSRFDVTINLRHNG 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIYGNNI 493
+ + R +E V G+ + N+
Sbjct: 194 KMIKQYRAAKTEVQAEKRIATVCGSAFVRNM 224
>gi|157838229|pdb|1B62|A Chain A, Mutl Complexed With Adp
Length = 355
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 58/342 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 9 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 68
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 69 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 126
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ ++I
Sbjct: 127 WQAYAEG------RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEI 180
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
+ R L NL L ++ GT AF
Sbjct: 181 IRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT--AFLEQALAIEWQHG 238
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 239 DLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 298
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 299 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 340
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 25 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 80 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVT 139
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+
Sbjct: 140 VKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 186
>gi|121635130|ref|YP_975375.1| DNA mismatch repair protein [Neisseria meningitidis FAM18]
gi|385340332|ref|YP_005894204.1| DNA mismatch repair protein MutL [Neisseria meningitidis G2136]
gi|416177807|ref|ZP_11610176.1| DNA mismatch repair protein MutL [Neisseria meningitidis M6190]
gi|416191656|ref|ZP_11616154.1| DNA mismatch repair protein MutL [Neisseria meningitidis ES14902]
gi|433467585|ref|ZP_20425039.1| DNA mismatch repair protein mutL [Neisseria meningitidis 87255]
gi|433492834|ref|ZP_20449925.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM586]
gi|433497133|ref|ZP_20454168.1| DNA mismatch repair protein mutL [Neisseria meningitidis M7089]
gi|433499196|ref|ZP_20456203.1| DNA mismatch repair protein mutL [Neisseria meningitidis M7124]
gi|433501168|ref|ZP_20458153.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM174]
gi|433503498|ref|ZP_20460455.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM126]
gi|166232098|sp|A1KUP6.1|MUTL_NEIMF RecName: Full=DNA mismatch repair protein MutL
gi|120866836|emb|CAM10594.1| DNA mismatch repair protein [Neisseria meningitidis FAM18]
gi|325132377|gb|EGC55070.1| DNA mismatch repair protein MutL [Neisseria meningitidis M6190]
gi|325138442|gb|EGC61008.1| DNA mismatch repair protein MutL [Neisseria meningitidis ES14902]
gi|325198576|gb|ADY94032.1| DNA mismatch repair protein MutL [Neisseria meningitidis G2136]
gi|432202419|gb|ELK58483.1| DNA mismatch repair protein mutL [Neisseria meningitidis 87255]
gi|432227765|gb|ELK83471.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM586]
gi|432233218|gb|ELK88850.1| DNA mismatch repair protein mutL [Neisseria meningitidis M7089]
gi|432233623|gb|ELK89249.1| DNA mismatch repair protein mutL [Neisseria meningitidis M7124]
gi|432235141|gb|ELK90758.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM174]
gi|432239293|gb|ELK94850.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM126]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 172/365 (47%), Gaps = 85/365 (23%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--NN 197
++ L+RD +Q+ ++ P++ + ER IA++ ++
Sbjct: 183 PHIAFSLKRDGKQV--------FKL--------------PAQSLHER-----IAAIVGDD 215
Query: 198 LELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYL 250
+ S+E D L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 216 FQTASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVL 275
Query: 251 PKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFY 310
P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 276 HNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRADL 332
Query: 311 TQSTS 315
T+S S
Sbjct: 333 TESVS 337
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|433522164|ref|ZP_20478851.1| DNA mismatch repair protein mutL [Neisseria meningitidis 61103]
gi|432258542|gb|ELL13824.1| DNA mismatch repair protein mutL [Neisseria meningitidis 61103]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L + + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFIDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I+V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIEVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ K S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|390369711|ref|XP_003731690.1| PREDICTED: DNA mismatch repair protein Mlh1-like, partial
[Strongylocentrotus purpuratus]
Length = 244
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL + + K++G ++N N+S K++ FLLFIN+ +++ IE VYS YLPK
Sbjct: 31 ELLEINHENSGLGFKLSGQVSNANYSVKRLIFLLFINHRLVDSSSLRKAIEAVYSTYLPK 90
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+Y SL + P NVDVNVHPTKHEVHFLHE+ IIE +Q LE+ LLG N+SR ++TQ
Sbjct: 91 NAHPFIYFSLEIAPHNVDVNVHPTKHEVHFLHEEAIIEDIQKCLEQKLLGCNSSRTYFTQ 150
Query: 313 STSIQVTVKQGG 324
+ + V+ GG
Sbjct: 151 GSIVASAVQYGG 162
>gi|418945543|ref|ZP_13498347.1| DNA mismatch repair protein, partial [Escherichia coli O157:H43
str. T22]
gi|375319142|gb|EHS65384.1| DNA mismatch repair protein, partial [Escherichia coli O157:H43
str. T22]
Length = 473
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 58/342 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAF------------ 210
+ R L NL L ++ GT AF
Sbjct: 175 IRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT--AFLEQALAIEWQHG 232
Query: 211 QLKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 233 DLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYL 292
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 293 EIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180
>gi|421556823|ref|ZP_16002733.1| DNA mismatch repair protein mutL [Neisseria meningitidis 80179]
gi|402336077|gb|EJU71339.1| DNA mismatch repair protein mutL [Neisseria meningitidis 80179]
Length = 658
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 62 SGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRADLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ S A +
Sbjct: 65 HPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|268684372|ref|ZP_06151234.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
gi|268624656|gb|EEZ57056.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
Length = 658
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 81/364 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T++ V ++ GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N+
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNS- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
P L L + P+ VDVNVHPTK E+ F + + V L K L +R T
Sbjct: 277 NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALA---DTRANLT 333
Query: 312 QSTS 315
+S S
Sbjct: 334 ESVS 337
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T++ V ++ GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAVDVELEGGGIRLIRVGDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|421568015|ref|ZP_16013746.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3001]
gi|402342960|gb|EJU78116.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3001]
Length = 658
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 78/349 (22%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
+GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 62 SGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
++ L+RD +Q+ K +++ + ++ +Q + LEI S N
Sbjct: 182 HPHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGDDFQTAS--------LEIDSGNG- 228
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLP 251
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 ------------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH 276
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 277 NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ S A +
Sbjct: 65 HPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|421767302|ref|ZP_16204057.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
gi|407624222|gb|EKF51003.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
Length = 630
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 168/334 (50%), Gaps = 47/334 (14%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +LDE + N+IAAGEV++RPA+ +KEL+ENS+DA ++ I V +K+ GL+L+++ DNG
Sbjct: 3 KIIELDEALANQIAAGEVVERPASVVKELVENSIDAGASRIVVKIKESGLRLIEVIDNGV 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT------- 118
GI KED+ +R TSK+ DL I T GFRGEA+ SI+ V+ +I T
Sbjct: 63 GIEKEDVAKALKRHATSKIKDKADLFKIRTLGFRGEAMPSIASVSEFSIETSVLEEESGT 122
Query: 119 ----------KTSPCAYRWCTYLA--DLM--ALALMEMSQYLQRDKEQIGDKEEKQ--WY 162
P A R T + +L A ++ + LQ + I D +Q +
Sbjct: 123 HLVSHGGKIDTLEPVAKREGTKVTVENLFYNTPARLKYIRSLQAELSHITDVINRQSMAH 182
Query: 163 RTVEHTLV----PLMKSQYQPSEKIVERACLLEIASLNNL----ELLSVEGTDDAFQLKV 214
V TL+ LMK+ + V IAS+ L ++L VE D F V
Sbjct: 183 PEVSFTLINEGRELMKTAGNGDLRQV-------IASVYGLPTAKKMLKVEAEDLDF--TV 233
Query: 215 TGWIT-------NVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+G+++ N N+ T + N + R I + Y L G FP V LS+ +DP+
Sbjct: 234 SGYVSLPELTRANRNYITLMINGRFIKNFLLNRAIIEGYGNRLMVGRFPIVVLSIGIDPQ 293
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
DVNVHPTK EV E ++ + ++K +
Sbjct: 294 LADVNVHPTKQEVRLSKERELMSLITEAIQKVFV 327
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 3/178 (1%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ I V +K+ GL+L+++ DNG GI KED+ +R TSK+ DL I T GFRGEA
Sbjct: 40 ASRIVVKIKESGLRLIEVIDNGVGIEKEDVAKALKRHATSKIKDKADLFKIRTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
+ SI+ V+ +I T K+ D ++P A +GT++ E+LFYN P R
Sbjct: 100 MPSIASVSEFSIETSVLEEESGTHLVSHGGKI-DTLEPVAKREGTKVTVENLFYNTPARL 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
K ++ E + I DV++R ++ +P V FTL + L ++T N +VI ++YG
Sbjct: 159 KYIRSLQAELSHITDVINRQSMAHPEVSFTLINEGREL--MKTAGNGDLRQVIASVYG 214
>gi|163749345|ref|ZP_02156594.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
gi|161331064|gb|EDQ01990.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
Length = 616
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 54/344 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I D+GTG
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDDGTG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++
Sbjct: 63 IPKEELSLALSRHATSKLSTLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
Query: 127 WCTYLADLMALALMEMS--------------------QYLQRDKEQIGDKEEKQWYR--- 163
+D MA+ ++ + ++L+ DK + +E W +
Sbjct: 123 AYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDE--WLKRIA 179
Query: 164 ----TVEHTLVPLMK--SQYQP---SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKV 214
+ TL K Y+P S++ ++R L+ S ++E + L +
Sbjct: 180 LVRGDIHFTLKNNGKVVRNYRPAKTSDQYLQRLALI---SGKKFAQQALEVKCEHEGLNL 236
Query: 215 TGWITNVNFSTKKM-TFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+G+I F T ++N + + Q ++ ++ +V L L +DP
Sbjct: 237 SGYIQPPYFEGPASDTQYFYVNGRQVRDRLVNHAVRQAFAEHVTGAQASYV-LMLELDPH 295
Query: 268 NVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEKTLLGSNTS 306
VDVNVHP KHEV F H+ D I++ +QS L + +GS S
Sbjct: 296 QVDVNVHPAKHEVRF-HQSRYVHDFILQALQSALSQ--VGSPVS 336
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I D+GTGI KE++ +
Sbjct: 19 VVERPASVIKELVENS-----LDAGATRVDIEIEKGGSKLIKIHDDGTGIPKEELSLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ +DL++I +FGFRGEALASIS V+ LT+ ++T A++A S +
Sbjct: 74 RHATSKLSTLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGSDMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ + A DLF+N P RR+ LK E+ I + + R A+ + FTLK
Sbjct: 134 VIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRGDIHFTLKNNG 193
Query: 468 ENLADIR 474
+ + + R
Sbjct: 194 KVVRNYR 200
>gi|343521368|ref|ZP_08758336.1| putative DNA mismatch repair protein [Parvimonas sp. oral taxon 393
str. F0440]
gi|343396574|gb|EGV09111.1| putative DNA mismatch repair protein [Parvimonas sp. oral taxon 393
str. F0440]
Length = 600
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 173/335 (51%), Gaps = 41/335 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L E + +IAAGEVI+ P + +KEL+ENS+D+ +T I+V +K G K + I DNG G
Sbjct: 3 IKLLSEDTIQKIAAGEVIENPYSVIKELVENSIDSGATFIKVEIKNAGKKEIMISDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++D+++ + TSKL FED+ SI ++GFRGEALASIS ++ + I T+TK S
Sbjct: 63 IEEDDIELAFTKHATSKLNNFEDIYSILSYGFRGEALASISAISKVDINTRTKNSEFGIH 122
Query: 127 WCTYLADLMALALMEMSQYLQ--------------RDKEQIGDKEEKQWYRTVEHTLVPL 172
C YL + + ++ L R K D E T+ ++
Sbjct: 123 -C-YLENNKIIRKNKIGMNLGTTIYIRDLFYNVPIRKKFLKSDAYENSIITTLMYSFA-- 178
Query: 173 MKSQYQPSEKIVERACLLEIASLNNLE--------------LLSVEGTDDAFQLKVTGWI 218
+ +Q + I + + E + N L+ L+SV D + K+ G+I
Sbjct: 179 LANQKISFKYIKDSKVVFETSEKNTLKDNIKHIFKDDFYKNLISVNIEDSDY--KIYGYI 236
Query: 219 TNVNF-STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+N +F + + LF+N I+ +IE+ + +PKG FP + + ++P +D+
Sbjct: 237 SNNHFYKGSRASQFLFVNGRYIFDEKIRNIIEKSIATLIPKGKFPTFVIFIEVNPSLIDI 296
Query: 272 NVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTS 306
NVHP K ++ F+ ED ++ + + + +L + TS
Sbjct: 297 NVHPNKRKIKFIFEDKLLNLLNNNITDIVLKNTTS 331
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I+V +K G K + I DNG GI ++D+++ + TSKL FED+ SI ++GFRGEA
Sbjct: 39 ATFIKVEIKNAGKKEIMISDNGCGIEEDDIELAFTKHATSKLNNFEDIYSILSYGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS ++ + I T+TK S ++K+ K N GT I DLFYN+P R+
Sbjct: 99 LASISAISKVDINTRTKNSEFGIHCYLENNKIIRKNK-IGMNLGTTIYIRDLFYNVPIRK 157
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGF 461
K LK + E + I ++ +A+ N + F
Sbjct: 158 KFLKSDAYENSIITTLMYSFALANQKISF 186
>gi|349610143|ref|ZP_08889502.1| DNA mismatch repair protein mutL [Neisseria sp. GT4A_CT1]
gi|348610705|gb|EGY60390.1| DNA mismatch repair protein mutL [Neisseria sp. GT4A_CT1]
Length = 664
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 162/348 (46%), Gaps = 78/348 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I+V + GG++L+++ DNG
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD +Q+ K +++ + ++ +Q A LEI S N
Sbjct: 183 PHIAFSLKRDGKQVF----KLPAQSLHERIAAIVGEDFQ--------AASLEIDSGNG-- 228
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 229 -----------ALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I+V + GG++L+++ DNG GI +D+++ R TSK+ DL +++ GFRGE
Sbjct: 40 ATAIEVELAGGGIRLIRVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEG 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI+ V+ LT+ ++ S A + D KL P A GT I A +LF+N P RR
Sbjct: 100 LASIASVSRLTLTSRQDGSAHATQVKAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
K LK + EY A ++ R A+ +PH+ F+LK+ + +
Sbjct: 159 KFLKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQV 196
>gi|419802231|ref|ZP_14327429.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
parainfluenzae HK262]
gi|419845269|ref|ZP_14368546.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
parainfluenzae HK2019]
gi|385191174|gb|EIF38596.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
parainfluenzae HK262]
gi|386416131|gb|EIJ30643.1| DNA mismatch repair protein, C-terminal domain protein [Haemophilus
parainfluenzae HK2019]
Length = 614
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 48/323 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + I + ++ GG L++I+DNG+G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIHIDIENGGASLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA-- 120
Query: 127 WCTY----------------------LADLMALALMEMSQYLQRDKEQIGDKEE-----K 159
W Y +A+L ++L+ DK + +E
Sbjct: 121 WQVYAQGREMETTIKPASHPVGTTVEVANLF-FNTPARRKFLRTDKTEFAHIDEVIRRIA 179
Query: 160 QWYRTVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLK 213
+ TL K QY+P+ E L +A++ + L ++ D L
Sbjct: 180 LAKFNIAFTLTHNGKIIRQYRPATN--EEQQLKRVAAICGDDFVQHALRIDWKHD--DLH 235
Query: 214 VTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
++GW+ F+ + +IN + R I Q Y+ +L +P L + ++P
Sbjct: 236 LSGWVATPEFTRSQNDLSYCYINGRMVRDKVITHAIRQAYAEHLHTEQYPAFVLFIDLNP 295
Query: 267 KNVDVNVHPTKHEVHFLHEDTII 289
+VDVNVHPTKHEV F H+ +I
Sbjct: 296 HDVDVNVHPTKHEVRF-HQARLI 317
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ I + ++ GG L++I+DNG+GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIHIDIENGGASLIRIRDNGSGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ +++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQNEAWQVYAQGREMETTIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS-EVIGNIYGN 491
K L+ E+ I +V+ R A+ ++ FTL + + R N + + I G+
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKFNIAFTLTHNGKIIRQYRPATNEEQQLKRVAAICGD 218
Query: 492 NISRRVRR 499
+ + R
Sbjct: 219 DFVQHALR 226
>gi|260900901|ref|ZP_05909296.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ4037]
gi|308106528|gb|EFO44068.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ4037]
Length = 669
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 159/319 (49%), Gaps = 53/319 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLD+ +T I + +++GG KL++++DNG G
Sbjct: 3 IKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 63 IAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHT 168
W Y L +M LQ IG + EK + ++
Sbjct: 121 WSAYSEGL------DMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDEL 174
Query: 169 LVPLMKSQYQPSEKIVERACLLE--IASLNNLE----LLSVEGTDDAF------------ 210
L + S++ S + ++ A+ N L+ + +V G +AF
Sbjct: 175 LKRIALSRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCG--NAFVRNMLRIELEHQ 232
Query: 211 QLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
LK+ GWIT + + ++ ++N + R I Q Y + L F L +
Sbjct: 233 GLKLHGWITTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIE 292
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 293 LDPHQVDVNVHPAKHEVRF 311
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 10/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S S +T I + +++GG KL++++DNG GI K+++ +
Sbjct: 19 VVERPASVIKELVENSLDS-----GATRIDIDIEKGGAKLIRVRDNGKGIAKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ A+ A ++
Sbjct: 74 RHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEAWSAYSEGLDMQVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E+ I +++ R A+ V ++
Sbjct: 134 LQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIALSRFDVSINVRHNG 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIYGNNISR 495
+ + R N +E V GN + N+ R
Sbjct: 194 KVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLR 226
>gi|255037559|ref|YP_003088180.1| DNA mismatch repair protein MutL [Dyadobacter fermentans DSM 18053]
gi|254950315|gb|ACT95015.1| DNA mismatch repair protein MutL [Dyadobacter fermentans DSM 18053]
Length = 629
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 175/337 (51%), Gaps = 44/337 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L +++ N+IAAGEV+QRPA+ +KEL+EN++DAK+T++QV +++ G L+Q+ DNGTG
Sbjct: 7 IQLLPDSIANQIAAGEVVQRPASVVKELMENAIDAKATNVQVILREAGRTLIQVIDNGTG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS----- 121
+ + D + ER TSK+ Q EDL I T GFRGEALASI+ VA + + T+ ++
Sbjct: 67 MSETDARMSFERHATSKIRQSEDLFRIRTMGFRGEALASIAAVAQVEMRTRQESDELGTL 126
Query: 122 ------------PCAYRWCTYLA------------DLMALALMEMSQYLQRDKEQIGDKE 157
P A T + + + +EM L D+ Q
Sbjct: 127 IRIDGSEIKTQEPVACPKGTNFSIRNLFFNVPARRNFLKSNSVEMRHVL--DEFQRVALA 184
Query: 158 EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
+ T+ H + QP K+V R +++I + E L+ D ++ +KV G+
Sbjct: 185 HPEVGFTLHHNDTEVF--NLQPV-KLVRR--IIDIYGKSYREQLAYCQEDTSY-IKVRGY 238
Query: 218 ITNVNFSTK-KMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
I F+ K + F+N N + + + +P+GS PF L + +DP ++D
Sbjct: 239 IGKPEFARKTRGEQFFFVNDRFIKHNYMHHAVISAFDGTIPEGSHPFYVLFIDIDPSHID 298
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
+N+HPTK E+ F E ++ + + ++K + N S+
Sbjct: 299 INIHPTKTEIKFDDERSVYAIIMAAVKKAVGVYNLSQ 335
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++T++QV +++ G L+Q+ DNGTG+ + D + ER TSK+ Q EDL I T GFRG
Sbjct: 41 AKATNVQVILREAGRTLIQVIDNGTGMSETDARMSFERHATSKIRQSEDLFRIRTMGFRG 100
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASI+ VA + + T+ ++ S++K +P A +GT +LF+N+P
Sbjct: 101 EALASIAAVAQVEMRTRQESDELGTLIRIDGSEIKTQ-EPVACPKGTNFSIRNLFFNVPA 159
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
RR LK S E + D R A+ +P VGFTL
Sbjct: 160 RRNFLKSNSVEMRHVLDEFQRVALAHPEVGFTL 192
>gi|325577874|ref|ZP_08148107.1| DNA mismatch repair protein MutL [Haemophilus parainfluenzae ATCC
33392]
gi|325160304|gb|EGC72431.1| DNA mismatch repair protein MutL [Haemophilus parainfluenzae ATCC
33392]
Length = 615
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 48/323 (14%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + I + ++ GG L++I+DNG+G
Sbjct: 3 IKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIHIDIENGGASLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKEELRLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA-- 120
Query: 127 WCTY----------------------LADLMALALMEMSQYLQRDKEQIGDKEE-----K 159
W Y +A+L ++L+ DK + +E
Sbjct: 121 WQVYAQGREMETIIKPASHPVGTTVEVANLF-FNTPARRKFLRTDKTEFAHIDEVIRRIA 179
Query: 160 QWYRTVEHTLVPLMK--SQYQPSEKIVERACLLEIASLNNLEL----LSVEGTDDAFQLK 213
+ TL K QY+P+ E L +A++ + L ++ D L
Sbjct: 180 LAKFNIAFTLTHNGKIVRQYRPAAN--EEQQLKRVATICGDDFVQHALRIDWKHD--DLH 235
Query: 214 VTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
++GW+ F+ + +IN + R I Q Y+ +L +P L + ++P
Sbjct: 236 LSGWVATPEFTRSQNDLSYCYINGRMVRDKVITHAIRQAYAEHLHTEQYPAFVLFIDLNP 295
Query: 267 KNVDVNVHPTKHEVHFLHEDTII 289
+VDVNVHPTKHEV F H+ +I
Sbjct: 296 HDVDVNVHPTKHEVRF-HQARLI 317
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ I + ++ GG L++I+DNG+GI KE++ + R TSK+ +DL +I + GFRGEA
Sbjct: 39 ANKIHIDIENGGASLIRIRDNGSGIPKEELRLALARHATSKIADLDDLEAILSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ ++T A++ +++ IKP + GT + +LF+N P RR
Sbjct: 99 LASISSVSRLTLTSRTAEQNEAWQVYAQGREMETIIKPASHPVGTTVEVANLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS-EVIGNIYGN 491
K L+ E+ I +V+ R A+ ++ FTL + + R N + + I G+
Sbjct: 159 KFLRTDKTEFAHIDEVIRRIALAKFNIAFTLTHNGKIVRQYRPAANEEQQLKRVATICGD 218
Query: 492 NISRRVRR 499
+ + R
Sbjct: 219 DFVQHALR 226
>gi|257094379|ref|YP_003168020.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046903|gb|ACV36091.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 615
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 47/358 (13%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M Q P+I L + ++++IAAGEV+ RPA+ LKELLEN+LDA S++IQ+ +++GG+KLL++
Sbjct: 1 MPQTPRIALLPDLLISQIAAGEVVDRPASVLKELLENALDAGSSTIQIQLEEGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
D+G G+ ++++ + R TSK+ DL + T GFRGEALAS++ VA LT+ ++ +
Sbjct: 61 SDDGGGMARDELALALTRHATSKINSLADLERVGTLGFRGEALASVAAVARLTLTSRQAS 120
Query: 121 SPCA---YRW--------CTYLADLMALALMEM----------SQYLQRDKEQIGDKEEK 159
S A + W A L A ++EM ++L+ + + E
Sbjct: 121 SDRAAGQHAWRLTDEPGAGPQPAALQAGTVVEMRDLYYNTPARRKFLKSEGSEFAHCAEA 180
Query: 160 QWYRTVEHTLVPLMKS-------QYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQL 212
+ H V S S+ V +L L L V A L
Sbjct: 181 VKRIALAHPGVAFTLSHNGRVALHLSASDSRVRVGAILGDEFLAESRCLDV----SAGPL 236
Query: 213 KVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMD 265
+V G+ +S + ++N R + Q Y L +P L L +D
Sbjct: 237 RVAGYCALPAYSRARGDAQYCYVNGRFVRDKLLGHALRQAYQDLLHGSRYPAYCLFLDID 296
Query: 266 PKNVDVNVHPTKHEVHF-----LHEDTIIERVQSMLEKTL--LGSNTSRVFYTQSTSI 316
P VDVNVHP K EV F +H+ + VQ +L L LG+ +S T +T +
Sbjct: 297 PAGVDVNVHPQKTEVRFRDARAVHQ-FVFHAVQRLLASPLATLGTASSSEVPTPNTQV 353
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+++R S+L++ L S++IQ+ +++GG+KLL++ D+G G+ ++++ +
Sbjct: 23 VVDRPASVLKELL-----ENALDAGSSTIQIQLEEGGVKLLRVSDDGGGMARDELALALT 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ DL + T GFRGEALAS++ VA LT+ ++ +S A A +L D
Sbjct: 78 RHATSKINSLADLERVGTLGFRGEALASVAAVARLTLTSRQASSDRA--AGQHAWRLTD- 134
Query: 408 IKPCAGNQ------GTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGF 461
+P AG Q GT + DL+YN P RRK LK E+ A+ V R A+ +P V F
Sbjct: 135 -EPGAGPQPAALQAGTVVEMRDLYYNTPARRKFLKSEGSEFAHCAEAVKRIALAHPGVAF 193
Query: 462 TLKKQNENLADIRTNVNSSHSEV-IGNIYGNNI 493
TL + ++++S S V +G I G+
Sbjct: 194 TLSHNGR----VALHLSASDSRVRVGAILGDEF 222
>gi|218132527|ref|ZP_03461331.1| hypothetical protein BACPEC_00386 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992637|gb|EEC58639.1| DNA mismatch repair domain protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 644
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 167/332 (50%), Gaps = 43/332 (12%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LD+ +N+IAAGEVI+RPA+ +KEL EN++DA +T++ + +K GG+ ++I DNG G
Sbjct: 3 IQILDQNTINKIAAGEVIERPASVVKELAENAIDAMATAVTIEIKDGGISFIRITDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K ++ + R +TSK+ EDL + + GFRGEAL+SI+ VA + +ITKTK + R
Sbjct: 63 IDKGEIPMAFLRHSTSKIKSVEDLMCVRSLGFRGEALSSIAAVAQIELITKTKEAFTGVR 122
Query: 127 WC------------------TYLA-----------DLMALALMEMSQYLQRDKEQIGDKE 157
+ T++ + A E + Y+ E +
Sbjct: 123 YVIEGGKEQNMEDIGAPDGTTFIVRNLFYNTPVRRKFLKTATTE-AGYVSALVEHLAFSH 181
Query: 158 EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGW 217
+ +R + + L S + I+ +IA+ NL +S + D ++++G+
Sbjct: 182 PEVSFRFINNGQNKLYTSGNGSLKDIIYHVNGRDIAT--NLLEVSAKTQD----IQISGF 235
Query: 218 ITNVNFSTKKMTFL-LFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVD 270
I S T+ FIN N I R IE+ Y Y+ + +PF L ++ +D
Sbjct: 236 IGKPMISRGNRTYENYFINGRYIKSNIITRAIEEGYKGYIMQHQYPFTALHFTIEQSIID 295
Query: 271 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
VNVHPTK E+ F + + + V + + TL G
Sbjct: 296 VNVHPTKMELRFSQNEFVYDFVLNAIRNTLSG 327
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 8/218 (3%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++++ L N +T++ + +K GG+ ++I DNG GI K ++ +
Sbjct: 19 VIERPASVVKE--LAENA---IDAMATAVTIEIKDGGISFIRITDNGCGIDKGEIPMAFL 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R +TSK+ EDL + + GFRGEAL+SI+ VA + +ITKTK + R I+ +
Sbjct: 74 RHSTSKIKSVEDLMCVRSLGFRGEALSSIAAVAQIELITKTKEAFTGVR-YVIEGGKEQN 132
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++ GT I +LFYN P RRK LK + E ++ +V A +P V F
Sbjct: 133 MEDIGAPDGTTFIVRNLFYNTPVRRKFLKTATTEAGYVSALVEHLAFSHPEVSFRFINNG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQ 505
+N + T+ N S ++I ++ G +I+ + S+ +Q
Sbjct: 193 QN--KLYTSGNGSLKDIIYHVNGRDIATNLLEVSAKTQ 228
>gi|375266883|ref|YP_005024326.1| DNA mismatch repair protein [Vibrio sp. EJY3]
gi|369842203|gb|AEX23347.1| DNA mismatch repair protein [Vibrio sp. EJY3]
Length = 676
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 158/319 (49%), Gaps = 53/319 (16%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLD+ +T I + +++GG KL++++DNG G
Sbjct: 3 IKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNGKG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ A
Sbjct: 63 IAKDELGLALSRHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGD------------------KEEKQWYRTVEHT 168
W Y EM LQ IG + EK + ++
Sbjct: 121 WSAYSEG------REMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIDEL 174
Query: 169 LVPLMKSQYQPSEKIVERACLLEI--ASLNNLE----LLSVEGTDDAF------------ 210
L + S++ S + ++ A+ N L+ + +V G +AF
Sbjct: 175 LKRIALSRFDVSITVRHNGKIIRQYRAAKNQLQTEKRIAAVCG--NAFVRNMLRIELEHQ 232
Query: 211 QLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
LK+ GWIT + + ++ ++N + R I Q Y + L F L +
Sbjct: 233 GLKLHGWITTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIE 292
Query: 264 MDPKNVDVNVHPTKHEVHF 282
+DP VDVNVHP KHEV F
Sbjct: 293 LDPHQVDVNVHPAKHEVRF 311
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 117/213 (54%), Gaps = 10/213 (4%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + +T I + +++GG KL++++DNG GI K+++ +
Sbjct: 19 VVERPASVIKELVENS-----LDSGATRIDIDIEKGGAKLIRVRDNGKGIAKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++ A+ A +++
Sbjct: 74 RHATSKIHSLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEAWSAYSEGREMQVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ I +++ R A+ V T++
Sbjct: 134 LQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIDELLKRIALSRFDVSITVRHNG 193
Query: 468 ENLADIRTNVNSSHSE-----VIGNIYGNNISR 495
+ + R N +E V GN + N+ R
Sbjct: 194 KIIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLR 226
>gi|315127883|ref|YP_004069886.1| methyl-directed mismatch repair protein [Pseudoalteromonas sp.
SM9913]
gi|315016397|gb|ADT69735.1| methyl-directed mismatch repair protein [Pseudoalteromonas sp.
SM9913]
Length = 608
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 47/352 (13%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T IQ+ +++GG KL++I+DNG G
Sbjct: 3 IEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNGAG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSKL +DL +I + GFRGEALASIS V+ LT+ +K + A++
Sbjct: 63 IAKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPENQEAAWQ 122
Query: 127 WCTYLADLMALALMEMSQ-----------YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKS 175
D MA+ + ++ + + + EK + ++ + + S
Sbjct: 123 AFAQGRD-MAVEVKPVAHPSGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIALS 181
Query: 176 QYQPS------EKIVER--------ACLLEIASLNNLEL----LSVEGTDDAFQLKVTGW 217
++ S EK+V + + +A + L ++ + QL GW
Sbjct: 182 RFDVSITLTHNEKVVRQYRAKTDPAQAITRVAQVAGKAFAEQGLHIQSGEAGLQLH--GW 239
Query: 218 ITNVNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDV 271
+ V + T ++NN + R I Q + + P + + +DP+ VDV
Sbjct: 240 VLPV--GSANTTQYTYVNNRMMRDKLILHAIRQAFEEVSGEQELPGFVIYIDIDPRQVDV 297
Query: 272 NVHPTKHEVHF----LHEDTIIERVQSM---LEKTLLGSNTSRVFYTQSTSI 316
NVHP KHEV F L D I++ ++ + L+ + S + ++ TS
Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVVVPLQAEFVNSPAAHAHHSPVTSF 349
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 93/151 (61%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T IQ+ +++GG KL++I+DNG GI K+++ + R TSKL +DL +I + GFRGEA
Sbjct: 39 ATRIQIDIERGGHKLIRIRDNGAGIAKDELTLALSRHATSKLKSLDDLENICSLGFRGEA 98
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASIS V+ LT+ +K + A++A + +KP A GT I +DLF+N P RR
Sbjct: 99 LASISSVSRLTLSSKPENQEAAWQAFAQGRDMAVEVKPVAHPSGTTIEVKDLFFNTPARR 158
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K L+ E++ I +++ R A+ V TL
Sbjct: 159 KFLRTEKTEFSHIDELIKRIALSRFDVSITL 189
>gi|433509665|ref|ZP_20466531.1| DNA mismatch repair protein mutL [Neisseria meningitidis 12888]
gi|433511649|ref|ZP_20468472.1| DNA mismatch repair protein mutL [Neisseria meningitidis 4119]
gi|432246166|gb|ELL01623.1| DNA mismatch repair protein mutL [Neisseria meningitidis 12888]
gi|432246410|gb|ELL01858.1| DNA mismatch repair protein mutL [Neisseria meningitidis 4119]
Length = 658
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 171/365 (46%), Gaps = 85/365 (23%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+++ DNG
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGG 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK------ 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122
Query: 120 ---------TSPCA-------------------------------YRWCTYLADLMALAL 139
+SP A Y C + + +ALA
Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--NN 197
++ L+RD KQ ++ P++ + ER IA++ ++
Sbjct: 183 PHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGDD 215
Query: 198 LELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYL 250
+ S+E D L++ G I F+ K F+N+ R ++Q Y L
Sbjct: 216 FQTASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVL 275
Query: 251 PKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFY 310
P L L + P+ VDVNVHPTK E+ F + + V L K L +R
Sbjct: 276 HNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALA---DTRADL 332
Query: 311 TQSTS 315
T+S S
Sbjct: 333 TESVS 337
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+++ DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELAGGGIRLIRVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P A GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-AAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|345874903|ref|ZP_08826701.1| DNA mismatch repair protein mutL [Neisseria weaveri LMG 5135]
gi|343969839|gb|EGV38045.1| DNA mismatch repair protein mutL [Neisseria weaveri LMG 5135]
Length = 660
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 81/363 (22%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I L + +VN+IAAGEV++RPA+ALKE++ENS+DA +T++ V + GG++L+++ DNG+
Sbjct: 3 RIAALPDHLVNQIAAGEVVERPASALKEIVENSIDAGATAVDVELAGGGIRLIRVTDNGS 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA- 124
GI +D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++T++S A
Sbjct: 63 GIHADDISLALHRHATSKIKSLTDLEHVASMGFRGEGLASIASVSRLTLTSRTESSAHAN 122
Query: 125 ---------------------------------------------YRWCTYLADLMALAL 139
Y C + + +ALA
Sbjct: 123 QIKAEDGKLSESGAAAHPVGTTVEVAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182
Query: 140 MEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLE 199
++ L+RD + I K +++ + ++ +Q + +LE
Sbjct: 183 PHIAFSLKRDGKSIF----KLPAQSLRERVAAIVGDDFQTA----------------SLE 222
Query: 200 LLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPK 252
+ S EG +++ G+I F+ K F+N R ++Q Y L
Sbjct: 223 IDSGEGI-----MRLHGFIAKPTFAKGKTDKQYCFVNRRFVRDKVMLHAVKQAYRDVLHN 277
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P L L + P+ VDVNVHPTK E+ F + + V L K L G +R T+
Sbjct: 278 ALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQAVHQLVFHTLNKALAG---TRADQTE 334
Query: 313 STS 315
S S
Sbjct: 335 SVS 337
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER S L++ + S +T++ V + GG++L+++ DNG+GI
Sbjct: 10 HLVNQIAAGEVVERPASALKEIVENS-----IDAGATAVDVELAGGGIRLIRVTDNGSGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+ + R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++T++S A +
Sbjct: 65 HADDISLALHRHATSKIKSLTDLEHVASMGFRGEGLASIASVSRLTLTSRTESSAHANQI 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL + A GT + +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSES-GAAAHPVGTTVEVAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENL 470
H+ F+LK+ +++
Sbjct: 184 HIAFSLKRDGKSI 196
>gi|416187286|ref|ZP_11614156.1| DNA mismatch repair protein MutL [Neisseria meningitidis M0579]
gi|325136514|gb|EGC59118.1| DNA mismatch repair protein MutL [Neisseria meningitidis M0579]
Length = 658
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 82/351 (23%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I L + +VN+IAAGEV++RPANALKE++ENS+DA +T+I V + GG++L+ + DNG
Sbjct: 2 PRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIHVSDNG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK----- 119
GI +D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ +
Sbjct: 62 GGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSLLTLTSRQEDSSHA 121
Query: 120 ----------TSPCA-------------------------------YRWCTYLADLMALA 138
+SP A Y C + + +ALA
Sbjct: 122 TQVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALA 181
Query: 139 LMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASL--N 196
++ L+RD KQ ++ P++ + ER IA++ +
Sbjct: 182 HPHIAFSLKRDG--------KQVFKL--------------PAQSLHER-----IAAIVGD 214
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIY 249
+ + S+E + L++ G I F+ K F+N+ R ++Q Y
Sbjct: 215 DFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDV 274
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
L P L L + P+ VDVNVHPTK E+ F + + V L K L
Sbjct: 275 LHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKAL 325
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 9/216 (4%)
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGI 337
H V+ + ++ER + L++ + S +T+I V + GG++L+ + DNG GI
Sbjct: 10 HLVNQIAAGEVVERPANALKEIVENS-----IDAGATAIDVELDGGGIRLIHVSDNGGGI 64
Query: 338 RKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
+D+++ R TSK+ DL +++ GFRGE LASI+ V+ LT+ ++ + S A +
Sbjct: 65 HPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSLLTLTSRQEDSSHATQV 124
Query: 398 SYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNP 457
D KL P GT I A +LF+N P RRK LK + EY A ++ R A+ +P
Sbjct: 125 KAEDGKLSSPTA-ATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAHP 183
Query: 458 HVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
H+ F+LK+ + + + S H E I I G++
Sbjct: 184 HIAFSLKRDGKQV--FKLPAQSLH-ERIAAIVGDDF 216
>gi|374376018|ref|ZP_09633676.1| DNA mismatch repair protein MutL [Niabella soli DSM 19437]
gi|373232858|gb|EHP52653.1| DNA mismatch repair protein MutL [Niabella soli DSM 19437]
Length = 621
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 163/334 (48%), Gaps = 39/334 (11%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P KI L + + N+IAAGEVIQRPA+A+KELLEN++DA +TSIQ+ V G LLQ+ DN
Sbjct: 2 PDKILLLPDNIANQIAAGEVIQRPASAVKELLENAVDAGATSIQLIVTDAGKTLLQVIDN 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK------ 117
G+G+ + D + ER TSK+ +DL + T GFRGEALASI+ VA + + TK
Sbjct: 62 GSGMSETDARMCFERHATSKIRNIDDLFHVRTMGFRGEALASIAAVAQVELKTKRPEDET 121
Query: 118 -----------TKTSPCAYRWCTYLA-DLMALALMEMSQYLQRDKEQ---IGDKEEK--Q 160
+ P A T +A + + +L+ + + I D+ +
Sbjct: 122 GTFIEVANSVVVRQEPVATPNGTSIAMKNLFFNVPARRNFLKSNAAEMRHIVDEFTRVTM 181
Query: 161 WYRTVEHTLVP----LMKSQYQPSEKIVERACLLE-IASL--NNLELLSVEGTDDAFQLK 213
Y ++ TL LM +P +A L + I L NN V TD+ +
Sbjct: 182 AYPHIKFTLTSNGQQLM--HLEPGSLTAAQAGLKQRIVQLLGNNYNAKMVAVTDNTAYMN 239
Query: 214 VTGWITNVNFSTK-KMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCMDP 266
+ G+ + K + F+NN R + Y +P SFP L + +DP
Sbjct: 240 IHGFTGKPETAKKTRGDQYFFVNNRFIRSAYLNHAVMNAYQELIPSDSFPMYVLFIDLDP 299
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
VDVNVHPTK E+ F E + VQ+ ++ L
Sbjct: 300 TQVDVNVHPTKQEIKFEDEKIVYAFVQAAIKHAL 333
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSIQ+ V G LLQ+ DNG+G+ + D + ER TSK+ +DL + T GFRGEA
Sbjct: 41 ATSIQLIVTDAGKTLLQVIDNGSGMSETDARMCFERHATSKIRNIDDLFHVRTMGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK--PCAGNQGTQIIAEDLFYNIPT 430
LASI+ VA + + TK P ++I+ ++ P A GT I ++LF+N+P
Sbjct: 101 LASIAAVAQVELKTK---RPEDETGTFIEVANSVVVRQEPVATPNGTSIAMKNLFFNVPA 157
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIR----TNVNSSHSEVIG 486
RR LK + E I D +R + PH+ FTL + L + T + + I
Sbjct: 158 RRNFLKSNAAEMRHIVDEFTRVTMAYPHIKFTLTSNGQQLMHLEPGSLTAAQAGLKQRIV 217
Query: 487 NIYGNNISRRV 497
+ GNN + ++
Sbjct: 218 QLLGNNYNAKM 228
>gi|221633643|ref|YP_002522869.1| DNA mismatch repair protein HexB [Thermomicrobium roseum DSM 5159]
gi|221156332|gb|ACM05459.1| DNA mismatch repair protein HexB [Thermomicrobium roseum DSM 5159]
Length = 575
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 54/338 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I +LDE V RIAAGEV++RPA+ +KEL+EN+LDA++ +I+V + GG +L+++QD+GTG
Sbjct: 3 IVRLDEATVRRIAAGEVVERPASVVKELVENALDAEARTIRVEIVAGGRELIRVQDDGTG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +++ + ER TSKL +FEDL ++++GFRGEALA+IS V+ I+++ +P R
Sbjct: 63 IPPDELPLAVERHATSKLHRFEDLARLASYGFRGEALAAISAVSECEIVSRVPDAPYGAR 122
Query: 127 W-------------------CTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEH 167
+ DL A + ++L++D + ++
Sbjct: 123 LLVRYGRPGRVEPIGAAPGTVVTVRDLFA-NVPARRRFLRQDATEAA---------LIQR 172
Query: 168 TLVPLMKSQYQPSEKIVE--RACLLEIASLNNLE-LLSVEGTDDAFQL-----------K 213
TL L ++ + ++ R L S + L+ L+ V G + A Q+
Sbjct: 173 TLAALALARPEVRFELTNDGRTVLATGGSGDLLDALIGVYGAETATQMLRLEEYCAGEIV 232
Query: 214 VTGWITNVNFSTKKMTFLLFINNPIKRMIE---------QVYSIYLPKGSFPFVYLSLCM 264
V G + S L + N +R +E Q Y L G +P +++ +
Sbjct: 233 VQGAVGLPRVSRPNRQALFVLVN--QRWVESRTLVAAIEQAYHTLLMVGRYPIGVVAVSL 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
VDVNVHPTK EV F E + V + +TLL
Sbjct: 291 PGDRVDVNVHPTKREVRFADERAVAAAVYEAVRRTLLA 328
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Query: 311 TQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRG 370
++ +I+V + GG +L+++QD+GTGI +++ + ER TSKL +FEDL ++++GFRG
Sbjct: 37 AEARTIRVEIVAGGRELIRVQDDGTGIPPDELPLAVERHATSKLHRFEDLARLASYGFRG 96
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALA+IS V+ I+++ +P R + ++P GT + DLF N+P
Sbjct: 97 EALAAISAVSECEIVSRVPDAPYGARL-LVRYGRPGRVEPIGAAPGTVVTVRDLFANVPA 155
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RR+ L+Q + E I ++ A+ P V F L N+ + T + + + +YG
Sbjct: 156 RRRFLRQDATEAALIQRTLAALALARPEVRFELT--NDGRTVLATGGSGDLLDALIGVYG 213
Query: 491 NNISRRVRRF 500
+ ++ R
Sbjct: 214 AETATQMLRL 223
>gi|213421364|ref|ZP_03354430.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 322
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 51/325 (15%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T + + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+KE++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQ--AEA 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M ++ +G E +Y T + K+++ ++I
Sbjct: 121 WQAYAEG------RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEI 174
Query: 184 VERACLLEIASLNNL---------------------ELLSVEGTDDAFQ----------L 212
+ R L NL L ++ GT Q L
Sbjct: 175 IRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDL 234
Query: 213 KVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ GW+ + N +T +T + ++N + R I Q L P L L +
Sbjct: 235 TLRGWVADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTII 289
DP VDVNVHP KHEV F H+ ++
Sbjct: 295 DPHQVDVNVHPAKHEVRF-HQSRLV 318
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S +T + + +++GG KL++I+DNG GI+KE++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A GT + DLFYN P RRK ++ E+N I +++ R A+
Sbjct: 134 VKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180
>gi|37528402|ref|NP_931747.1| DNA mismatch repair protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81833855|sp|Q7MYT9.1|MUTL_PHOLL RecName: Full=DNA mismatch repair protein MutL
gi|36787840|emb|CAE16955.1| DNA mismatch repair protein [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 631
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 59/345 (17%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L + N+IAAGEV++RPA+ +KEL+ENSLDA + I + +++GG+KL++++DNG G
Sbjct: 3 IKILPPQLANQIAAGEVVERPASVVKELVENSLDAGANRIDIEIERGGVKLIRVRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A
Sbjct: 63 INHQELALALARHATSKIATLDDLEAIISMGFRGEALASISSVSRLTLTSRTEEQHEA-- 120
Query: 127 WCTYLADLMALALMEMSQYLQRDKEQIGDKEE--KQWYRT-VEHTLVPLMKSQYQPSEKI 183
W Y +M+ ++ +G E +Y T + K+++ +++
Sbjct: 121 WQAYAEG------RDMAVTVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEV 174
Query: 184 VERACLLEIASLNNLE---------------------LLSVEGT-------------DDA 209
V R L + L NL L+S+ GT DD
Sbjct: 175 VRRIALARLDVLINLHHNGKLVRQYRPAKDESQYERRLVSICGTAFMQRALSLSWQHDD- 233
Query: 210 FQLKVTGWITN-VNFSTKKMTFLLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSL 262
L + GW+ + +N ++N + R I Q Y L P L L
Sbjct: 234 --LSIKGWVVDPMNTEASGDIQYCYVNGRMMRDRLINHAIRQAYQDLLRGEQQPAYVLYL 291
Query: 263 CMDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTLLGS 303
+DP VDVNVHP KHEV F L D I + V ++L++ G+
Sbjct: 292 GVDPHQVDVNVHPAKHEVRFHQARLVHDFIYQGVIAVLKQRGSGA 336
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S + I + +++GG+KL++++DNG GI +++ +
Sbjct: 19 VVERPASVVKELVENS-----LDAGANRIDIEIERGGVKLIRVRDNGCGINHQELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T+ A++A +
Sbjct: 74 RHATSKIATLDDLEAIISMGFRGEALASISSVSRLTLTSRTEEQHEAWQAYAEGRDMAVT 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAV 454
+KP A G+ + DLFYN P RRK L+ E+ I +VV R A+
Sbjct: 134 VKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIAL 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,335,421,016
Number of Sequences: 23463169
Number of extensions: 292403070
Number of successful extensions: 805010
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5219
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 782860
Number of HSP's gapped (non-prelim): 15943
length of query: 512
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 365
effective length of database: 8,910,109,524
effective search space: 3252189976260
effective search space used: 3252189976260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)