Your job contains 1 sequence.
>psy1955
MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI
QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT
SPCAYRWCTYLADLMALALMEMSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPS
EKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPIKR
MIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL
LGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDL
NSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQII
AEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS
HSEVIGNIYGNNISRRVRRFSSASQSALARKA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1955
(512 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 680 1.8e-83 2
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 685 2.5e-82 2
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 648 2.7e-82 2
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 685 2.8e-82 2
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 678 4.5e-82 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 662 1.1e-81 2
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 662 3.3e-81 2
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 656 2.7e-80 2
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 656 2.7e-80 2
FB|FBgn0011659 - symbol:Mlh1 "Mlh1" species:7227 "Drosoph... 642 4.1e-77 2
DICTYBASE|DDB_G0287393 - symbol:mlh1 "MutL DNA mismatch r... 565 6.4e-69 2
UNIPROTKB|Q7SA79 - symbol:NCU08309 "Putative uncharacteri... 570 7.2e-66 2
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 480 1.3e-65 2
ASPGD|ASPL0000056766 - symbol:AN0126 species:162425 "Emer... 522 2.2e-65 2
UNIPROTKB|Q5BH54 - symbol:AN0126.2 "DNA mismatch repair p... 522 2.2e-65 2
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 496 2.5e-61 2
SGD|S000004777 - symbol:MLH1 "Protein required for mismat... 490 5.5e-61 2
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 454 5.6e-61 2
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 466 6.6e-61 2
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 487 3.4e-59 2
POMBASE|SPBC1703.04 - symbol:mlh1 "MutL family protein Ml... 476 3.3e-54 2
UNIPROTKB|I3LT92 - symbol:MLH1 "Uncharacterized protein" ... 555 1.1e-53 1
GENEDB_PFALCIPARUM|PF11_0184 - symbol:PF11_0184 "DNA mism... 438 3.7e-52 2
UNIPROTKB|Q8IIJ0 - symbol:PF11_0184 "DNA mismatch repair ... 438 3.7e-52 2
UNIPROTKB|Q7RE54 - symbol:PY05214 "HMLH1 gene product-rel... 439 4.3e-52 2
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 457 1.2e-43 2
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 457 1.2e-43 2
UNIPROTKB|E9PCU2 - symbol:MLH1 "DNA mismatch repair prote... 428 7.5e-40 1
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 310 4.2e-34 2
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 336 9.3e-34 3
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 300 2.1e-33 2
TIGR_CMR|CPS_0323 - symbol:CPS_0323 "DNA mismatch repair ... 315 2.2e-33 2
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 301 8.7e-33 2
UNIPROTKB|P74925 - symbol:mutL "DNA mismatch repair prote... 289 3.2e-32 2
UNIPROTKB|A6VD59 - symbol:mutL "DNA mismatch repair prote... 310 5.4e-32 2
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 271 1.0e-30 2
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 271 1.0e-30 2
TIGR_CMR|SO_0601 - symbol:SO_0601 "DNA mismatch repair pr... 297 1.0e-30 2
UNIPROTKB|P23367 - symbol:mutL species:83333 "Escherichia... 297 1.2e-30 2
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 297 3.2e-30 2
TIGR_CMR|VC_0345 - symbol:VC_0345 "DNA mismatch repair pr... 295 3.6e-30 2
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 284 5.0e-30 2
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 281 5.6e-29 2
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 287 7.7e-29 2
UNIPROTKB|E7EUC9 - symbol:MLH1 "DNA mismatch repair prote... 323 8.1e-29 1
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 261 9.5e-28 3
UNIPROTKB|B7Z821 - symbol:MLH1 "cDNA FLJ55289, highly sim... 324 1.2e-27 1
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 267 1.9e-27 2
UNIPROTKB|C9JZ54 - symbol:MLH1 "DNA mismatch repair prote... 311 1.9e-27 1
UNIPROTKB|Q89DE6 - symbol:mutL "DNA mismatch repair prote... 270 3.0e-27 2
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 275 5.0e-27 2
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 282 4.1e-26 2
UNIPROTKB|Q8A120 - symbol:mutL "DNA mismatch repair prote... 250 6.0e-26 2
UNIPROTKB|Q3KLC2 - symbol:mutL "DNA mismatch repair prote... 250 1.2e-25 2
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 250 2.9e-25 3
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 250 3.2e-25 3
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 249 3.4e-25 2
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 262 5.2e-25 2
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 249 7.6e-25 3
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 249 7.6e-25 3
UNIPROTKB|O67518 - symbol:mutL "DNA mismatch repair prote... 262 1.7e-24 2
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 283 6.4e-24 2
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 254 1.4e-23 2
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 243 1.6e-23 2
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 239 5.4e-23 2
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 240 6.2e-23 2
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 264 1.1e-22 2
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 264 1.1e-22 2
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 222 1.5e-22 2
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 237 3.0e-22 2
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 232 9.2e-22 2
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 232 1.0e-21 2
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 246 1.1e-21 2
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 257 1.4e-21 2
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 282 1.7e-21 1
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 281 3.7e-21 1
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 281 3.7e-21 1
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 281 3.7e-21 1
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 257 4.6e-21 2
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 242 1.4e-20 2
UNIPROTKB|E2RAQ2 - symbol:PMS1 "Uncharacterized protein" ... 233 2.0e-20 2
UNIPROTKB|F1P0J4 - symbol:PMS1 "Uncharacterized protein" ... 222 3.0e-20 2
UNIPROTKB|F1MW63 - symbol:PMS1 "Uncharacterized protein" ... 242 4.4e-20 2
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 235 5.8e-20 2
ZFIN|ZDB-GENE-030616-528 - symbol:pms1 "PMS1 postmeiotic ... 239 9.1e-20 3
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 237 9.9e-20 2
UNIPROTKB|Q9RTR0 - symbol:mutL "DNA mismatch repair prote... 221 1.1e-19 2
RGD|1359511 - symbol:Pms1 "postmeiotic segregation increa... 230 1.8e-19 2
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 239 7.3e-19 2
UNIPROTKB|D4A651 - symbol:D4A651 "Uncharacterized protein... 230 9.3e-19 2
UNIPROTKB|P54277 - symbol:PMS1 "PMS1 protein homolog 1" s... 230 1.0e-18 2
UNIPROTKB|C9JF76 - symbol:PMS1 "PMS1 protein homolog 1" s... 230 1.8e-18 1
UNIPROTKB|E9PC40 - symbol:PMS1 "PMS1 protein homolog 1" s... 230 1.8e-18 1
UNIPROTKB|Q5XG96 - symbol:PMS1 "PMS1 protein homolog 1" s... 230 1.8e-18 1
UNIPROTKB|G3N1K7 - symbol:PMS2 "Uncharacterized protein" ... 229 2.3e-18 1
UNIPROTKB|Q753U9 - symbol:AFR226C "AFR226Cp" species:2848... 204 3.3e-18 3
UNIPROTKB|Q3BDU3 - symbol:PMS1 "Rhabdomyosarcoma antigen ... 250 3.7e-18 1
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 231 6.5e-18 3
DICTYBASE|DDB_G0283883 - symbol:mlh3 "MutL DNA mismatch r... 211 1.2e-17 2
UNIPROTKB|F8W8L1 - symbol:PMS1 "PMS1 protein homolog 1" s... 217 4.6e-17 1
WARNING: Descriptions of 30 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 131/186 (70%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTAEAKCAYRATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
Score = 514 (186.0 bits), Expect = 1.8e-83, Sum P(2) = 1.8e-83
Identities = 102/124 (82%), Positives = 113/124 (91%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127
Query: 127 WCTY 130
TY
Sbjct: 128 -ATY 130
Score = 346 (126.9 bits), Expect = 1.8e-83, Sum P(2) = 1.8e-83
Identities = 67/121 (55%), Positives = 89/121 (73%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ V D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 227 ELIEVGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 287 NTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 59 (25.8 bits), Expect = 3.2e-53, Sum P(2) = 3.2e-53
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 144 QYLQRDKEQIGDKEE------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNN 197
QY+ + G + E W TVEH + +S P + E +L++A+L +
Sbjct: 690 QYISEESTLSGQQSEVCGSSANPWKWTVEHIVYKAFRSHLLPPKHFTEDGNILQLANLPD 749
Query: 198 L 198
L
Sbjct: 750 L 750
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 134/186 (72%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
Score = 509 (184.2 bits), Expect = 2.5e-82, Sum P(2) = 2.5e-82
Identities = 100/120 (83%), Positives = 110/120 (91%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 341 (125.1 bits), Expect = 2.5e-82, Sum P(2) = 2.5e-82
Identities = 65/121 (53%), Positives = 89/121 (73%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 227 ELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 287 NTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 62 (26.9 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 144 QYLQRDKEQIGDKEE------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNN 197
QY+ + G + E W TVEH + ++S P + E +L++A+L +
Sbjct: 689 QYISEESTLSGQQSEVPGSIPNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPD 748
Query: 198 L 198
L
Sbjct: 749 L 749
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 124/186 (66%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQ+TVK+GGLKL+ IQDNGTGIRK+DM+IVCERFTTSKL FEDL+SI+T+GFRGE
Sbjct: 41 KSTNIQITVKEGGLKLILIQDNGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGE 100
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT + CAYRA+Y D KLK P KPCAGNQGT I EDLFYN+ TR
Sbjct: 101 ALASISHVAHVTITTKTADAKCAYRANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTR 160
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY++I +VVSRYA+HN F++KKQ E +AD++T N+S + I ++G
Sbjct: 161 RKALKSPSEEYSRIVEVVSRYAIHNSGKSFSVKKQGEMVADVKTLPNASVLDNIRVVFGV 220
Query: 492 NISRRV 497
+SR +
Sbjct: 221 AVSREL 226
Score = 500 (181.1 bits), Expect = 2.7e-82, Sum P(2) = 2.7e-82
Identities = 95/120 (79%), Positives = 112/120 (93%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGE+IQRPANA+KE++EN LDAKST+IQ+TVK+GGLKL+ IQDNGTG
Sbjct: 6 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 65
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRK+DM+IVCERFTTSKL FEDL+SI+T+GFRGEALASISHVAH+TI TKT + CAYR
Sbjct: 66 IRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 125
Score = 347 (127.2 bits), Expect = 2.7e-82, Sum P(2) = 2.7e-82
Identities = 67/121 (55%), Positives = 88/121 (72%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ VE D F KV G+I+N N+S KK +LFIN+ +K+ IE VY+ YLPK
Sbjct: 225 ELIEVECEDQKFAFKVKGYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPK 284
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+N+DVNVHPTKHEVHFLHED+IIE +Q +E LLGSN+SR ++TQ
Sbjct: 285 NTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESIQKHIESKLLGSNSSRTYFTQ 344
Query: 313 S 313
+
Sbjct: 345 T 345
Score = 79 (32.9 bits), Expect = 4.6e-54, Sum P(2) = 4.6e-54
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 143 SQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
S L+ D ++ D E W VEH L ++S + P++ + E +L+IASL +L
Sbjct: 664 SYTLEADADEPQDAE-MSWQWKVEHVLFKALRSLFSPAKHLSEDGSVLQIASLPDL 718
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 134/186 (72%), Positives = 153/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 35 KSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 94
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 95 ALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATR 154
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+GN
Sbjct: 155 RKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGN 214
Query: 492 NISRRV 497
+SR +
Sbjct: 215 AVSREL 220
Score = 503 (182.1 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 99/118 (83%), Positives = 108/118 (91%)
Query: 9 KLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIR 68
+LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTGIR
Sbjct: 2 RLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIR 61
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
KED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 62 KEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 119
Score = 341 (125.1 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 65/121 (53%), Positives = 89/121 (73%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 219 ELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPK 278
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 279 NTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 338
Query: 313 S 313
+
Sbjct: 339 T 339
Score = 66 (28.3 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 146 LQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
L+ D+ ++ W TVEH + ++S P + E +L++A+L +L
Sbjct: 620 LEIDESEVPGSIPNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDL 672
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 132/186 (70%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+QIQDNGTGIRKED++IVCERFTTSKL FEDL IST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRA Y D KLK P KPCAGNQGTQI EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RYAVHN +GF++KKQ E +AD+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYAVHNSGIGFSVKKQGETVADVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
Score = 501 (181.4 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 98/120 (81%), Positives = 109/120 (90%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED++IVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 348 (127.6 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 67/121 (55%), Positives = 88/121 (72%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ VE D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 227 ELIEVECEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESASLRKAIETVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHED+I+ER+Q +E LLGSN SR ++TQ
Sbjct: 287 STHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSILERLQQHIESRLLGSNASRTYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 60 (26.2 bits), Expect = 9.8e-52, Sum P(2) = 9.8e-52
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 146 LQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
L + ++ W TVEH + +S P + E +L++A+L +L
Sbjct: 699 LSGQQSEVPGSTANPWKWTVEHVIYKAFRSHLLPPKHFTEDGNILQLANLPDL 751
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 128/186 (68%), Positives = 152/186 (81%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+ST+IQV VK+GGLKL+QIQDNGTGIRKED+DIVCERFTTSKL FEDL SIST+GFRGE
Sbjct: 43 KSTNIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+TI TKT CAYRASY D KL+ P KPCAGNQGT I EDLFYNI TR
Sbjct: 103 ALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RY++HN + F++KKQ E ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
Score = 506 (183.2 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 99/120 (82%), Positives = 110/120 (91%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE++EN LDAKST+IQV VK+GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL SIST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 339 (124.4 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 65/121 (53%), Positives = 89/121 (73%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ V D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 227 ELIEVGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQ
Sbjct: 287 NTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 60 (26.2 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K W TVEH + +S P + E +L++A+L +L
Sbjct: 714 KPWKWTVEHIIYKAFRSHLLPPKHFTEDGNVLQLANLPDL 753
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 125/186 (67%), Positives = 154/186 (82%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
+STSIQV VK+GGLKL+Q+QDNG GIRKED+ IVCERFTTSKL +FEDL SIST+GFRGE
Sbjct: 43 KSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASISHVAH+T+ TKT + CAYRASY D K+K P KPCAGNQGTQI+ EDLFYN+ TR
Sbjct: 103 ALASISHVAHVTVTTKTADAKCAYRASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTR 162
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
RKALK PSEEY KI +VV RYA+HN + F++KKQ + ++D+RT N++ + I +I+GN
Sbjct: 163 RKALKNPSEEYAKILEVVGRYAIHNSGISFSVKKQGDTVSDVRTLSNATTVDNIRSIFGN 222
Query: 492 NISRRV 497
+SR +
Sbjct: 223 AVSREL 228
Score = 492 (178.3 bits), Expect = 3.3e-81, Sum P(2) = 3.3e-81
Identities = 95/120 (79%), Positives = 109/120 (90%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDE VVNRIAAGEVIQRPANA+KE++EN LDAKSTSIQV VK+GGLKL+Q+QDNG G
Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNGCG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+ IVCERFTTSKL +FEDL SIST+GFRGEALASISHVAH+T+ TKT + CAYR
Sbjct: 68 IRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYR 127
Score = 350 (128.3 bits), Expect = 3.3e-81, Sum P(2) = 3.3e-81
Identities = 71/122 (58%), Positives = 92/122 (75%)
Query: 199 ELLSVEGTDDA-FQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLP 251
EL+ V G +DA K+ G+ITN N+S KK FLLFIN+ +++ IE VY+ YLP
Sbjct: 227 ELIEV-GCEDANLAFKMKGYITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLP 285
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
K + PF+YLSL + PKNVDVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++T
Sbjct: 286 KSTHPFLYLSLEIAPKNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFT 345
Query: 312 QS 313
Q+
Sbjct: 346 QT 347
Score = 60 (26.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 146 LQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
L R + + D W TVEH + ++ P + + +L++A+L +L
Sbjct: 698 LTRSQNEDSDSGPPPWKWTVEHVVYKAFRTHLLPPKHFTDDGNILQLANLPDL 750
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 128/217 (58%), Positives = 165/217 (76%)
Query: 285 EDTIIERVQS--MLEK--TLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
++T++ R+ + ++++ + T +ST+IQV V++GGLKL+QIQDNGTGIRKE
Sbjct: 12 DETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTGIRKE 71
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYI 400
D+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYRASY
Sbjct: 72 DLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYS 131
Query: 401 DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
D KL+ P KPCAGNQGT I EDLFYNI TR+KALK PSEEY KI +VV RY++HN +
Sbjct: 132 DGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHNSGIS 191
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F++KKQ E ++D+RT N++ + I +I+GN +SR +
Sbjct: 192 FSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSREL 228
Score = 494 (179.0 bits), Expect = 2.7e-80, Sum P(2) = 2.7e-80
Identities = 97/120 (80%), Positives = 108/120 (90%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE+ EN LDAKST+IQV V++GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 339 (124.4 bits), Expect = 2.7e-80, Sum P(2) = 2.7e-80
Identities = 66/121 (54%), Positives = 88/121 (72%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ V D K+ G+I+N N+S KK FLLFIN+ +K+ IE VY+ YLPK
Sbjct: 227 ELIEVGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YL L + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 287 NTHPFLYLILEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 60 (26.2 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K W TVEH + +S P + E +L++A+L +L
Sbjct: 711 KPWKWTVEHIIYKAFRSHLLPPKHFTEDGNVLQLANLPDL 750
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 128/217 (58%), Positives = 165/217 (76%)
Query: 285 EDTIIERVQS--MLEK--TLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKE 340
++T++ R+ + ++++ + T +ST+IQV V++GGLKL+QIQDNGTGIRKE
Sbjct: 12 DETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTGIRKE 71
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYI 400
D+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYRASY
Sbjct: 72 DLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYS 131
Query: 401 DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVG 460
D KL+ P KPCAGNQGT I EDLFYNI TR+KALK PSEEY KI +VV RY++HN +
Sbjct: 132 DGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHNSGIS 191
Query: 461 FTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
F++KKQ E ++D+RT N++ + I +I+GN +SR +
Sbjct: 192 FSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSREL 228
Score = 494 (179.0 bits), Expect = 2.7e-80, Sum P(2) = 2.7e-80
Identities = 97/120 (80%), Positives = 108/120 (90%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++LDETVVNRIAAGEVIQRPANA+KE+ EN LDAKST+IQV V++GGLKL+QIQDNGTG
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
IRKED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127
Score = 339 (124.4 bits), Expect = 2.7e-80, Sum P(2) = 2.7e-80
Identities = 66/121 (54%), Positives = 88/121 (72%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ V D K+ G+I+N N+S KK FLLFIN+ +K+ IE VY+ YLPK
Sbjct: 227 ELIEVGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALKKAIEAVYAAYLPK 286
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YL L + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 287 NTHPFLYLILEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 346
Query: 313 S 313
+
Sbjct: 347 T 347
Score = 60 (26.2 bits), Expect = 6.6e-51, Sum P(2) = 6.6e-51
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 159 KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K W TVEH + +S P + E +L++A+L +L
Sbjct: 711 KPWKWTVEHIIYKAFRSHLLPPKHFTEDGNVLQLANLPDL 750
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 133/214 (62%), Positives = 162/214 (75%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
II+R + L K LL ++ QST IQV VK GGLKLLQIQDNGTGIR+ED+ IVCE
Sbjct: 26 IIQRPANAL-KELLENSLD----AQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCE 80
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT C Y+A+Y D KL+
Sbjct: 81 RFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ 140
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
KPCAGNQGT I EDLFYN+P RR+AL+ P+EE+ ++++V++RYAVHNP VGFTL+KQ
Sbjct: 141 PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQG 200
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ +RT V SS SE I IYG IS+ + FS
Sbjct: 201 DAQPALRTPVASSRSENIRIIYGAAISKELLEFS 234
Score = 503 (182.1 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 102/128 (79%), Positives = 112/128 (87%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
QP I+KLDE VVNRIAAGE+IQRPANALKELLENSLDA+ST IQV VK GGLKLLQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NGTGIR+ED+ IVCERFTTSKLT+FEDL+ I+TFGFRGEALASISHVAHL+I TKT
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 123 CAYRWCTY 130
C Y+ TY
Sbjct: 126 CGYK-ATY 132
Score = 292 (107.8 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 54/120 (45%), Positives = 79/120 (65%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
ELL D+ ++ + IT VN+S KK LLFIN ++ ++ +Y+ YLP+
Sbjct: 229 ELLEFSHRDEVYKFEAECLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPR 288
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+SL + P+N+DVNVHPTKHEVHFL+++ I++ ++ +E LLGSN +R FY Q
Sbjct: 289 GHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQ 348
Score = 49 (22.3 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 145 YLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
Y Q D + +W T+EH L P K P +I ++ + E+ +L L
Sbjct: 608 YAQLDWREGATAGFSRW--TMEHVLFPAFKKYLLPPPRIKDQ--IYELTNLPTL 657
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 565 (203.9 bits), Expect = 3.5e-54, P = 3.5e-54
Identities = 115/245 (46%), Positives = 168/245 (68%)
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQS--MLEK--TLLGSNTSRVFYTQSTSIQVTVKQG 323
N++ ++ +K ++H L ++ ++ ++ + ++++ L +ST+I VTVK G
Sbjct: 51 NLNNLINESKKKIHRLTQE-VVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDG 109
Query: 324 GLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLT 383
G+K LQIQDNG+GIR EDM IVCERFTTSKLT+FEDL SI +FGFRGEAL+SISHV+HL
Sbjct: 110 GMKFLQIQDNGSGIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLK 169
Query: 384 IITKTKTSPCAYRASYIDSKLKDPI--------KPCAGNQGTQIIAEDLFYNIPTRRKAL 435
I+TKT SPCAYRA Y++ KL P KPCAG GTQI EDLF+N P+R+ L
Sbjct: 170 ILTKTADSPCAYRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVL 229
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTN--VNSSHSEVIGNIYGNNI 493
K +E+++I ++ +YA++NP V F LKKQ + ++ T+ NS +VIG++YG ++
Sbjct: 230 KNTVDEHSRIVLLMKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDL 289
Query: 494 SRRVR 498
S+ ++
Sbjct: 290 SKELK 294
Score = 484 (175.4 bits), Expect = 6.4e-69, Sum P(2) = 6.4e-69
Identities = 95/123 (77%), Positives = 108/123 (87%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +L + VVN+I+AGEVIQRP+NALKELLEN LDAKST+I VTVK GG+K LQIQDNG+
Sbjct: 62 KIHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGS 121
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GIR EDM IVCERFTTSKLT+FEDL SI +FGFRGEAL+SISHV+HL I+TKT SPCAY
Sbjct: 122 GIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCAY 181
Query: 126 RWC 128
R C
Sbjct: 182 RAC 184
Score = 249 (92.7 bits), Expect = 6.4e-69, Sum P(2) = 6.4e-69
Identities = 50/109 (45%), Positives = 75/109 (68%)
Query: 210 FQLKVTGWITNVNFSTKKMTFLLFINNPI------KRMIEQVYSIYLPKGSFPFVYLSLC 263
F +K G+ ++ N+++KK+ F+LFIN + K +EQVYS YLPKG+ PF+++ L
Sbjct: 328 FTMK--GFFSSTNYNSKKINFILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLL 385
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PKN+DVN+HPTK EV LHE+ IIE +Q +++ L S+ S+ F TQ
Sbjct: 386 VPPKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFSTQ 434
Score = 57 (25.1 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 156 KEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K+ K+W ++H + P + + P +K +++I +L+NL
Sbjct: 838 KDGKEWI--IQHLIFPAFR-KLSPPKKFANDGSVIQITTLDNL 877
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 115/199 (57%), Positives = 143/199 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STS+++ VK GGLKLLQI DNG GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEA
Sbjct: 67 STSLEIVVKDGGLKLLQITDNGCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKL--------KDPIKPCAGNQGTQIIAEDL 424
LASISH+AHLT+ TKT+ S CA+RA Y KL DP KP AG QGTQI EDL
Sbjct: 127 LASISHIAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDP-KPVAGRQGTQITVEDL 185
Query: 425 FYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
FYNIPTRR+A + S+EYNKI D+V RYAVH HV F+ KK E+ I N+S ++
Sbjct: 186 FYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKYGESSTSIAIQANASSTDR 245
Query: 485 IGNIYGNNISRRVRRFSSA 503
I IYG +++ + +S++
Sbjct: 246 IRQIYGGSVANELIEYSTS 264
Score = 438 (159.2 bits), Expect = 7.2e-66, Sum P(2) = 7.2e-66
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VVN+IAAGE+I P +ALKEL+EN++DA STS+++ VK GGLKLLQI DN
Sbjct: 28 PRRIRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDN 87
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G GI K+D+ I+CERFTTSKL +FEDL SIST+GFRGEALASISH+AHLT+ TKT+ S C
Sbjct: 88 GCGIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHIAHLTVTTKTQESNC 147
Query: 124 AYR 126
A+R
Sbjct: 148 AWR 150
Score = 263 (97.6 bits), Expect = 7.2e-66, Sum P(2) = 7.2e-66
Identities = 56/121 (46%), Positives = 75/121 (61%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNP------IKRMIEQVYSIYLPK 252
EL+ +DD + K G TN N+S KK T LLFIN+ I++ +EQ Y+ +LPK
Sbjct: 257 ELIEYSTSDDRWGFKAQGLATNANYSLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
PFVYLSL + P+ VDVNVHPTK EV+FL+E II+ + + L +TSR F TQ
Sbjct: 317 NGHPFVYLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQ 376
Query: 313 S 313
+
Sbjct: 377 T 377
Score = 51 (23.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 165 VEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+EH L P KS+ ++ +++ +LE+A+L L
Sbjct: 712 LEHYLFPAFKSRLVATKSLMQTG-ILEVANLKGL 744
Score = 42 (19.8 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKT 299
K+VDV +H V F E + +S L T
Sbjct: 695 KDVDVETVARRHHVRFALEHYLFPAFKSRLVAT 727
Score = 42 (19.8 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 275 PTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS-IQVTV 320
P ++E + DT + ++ SML + SR STS ++ T+
Sbjct: 410 PARNESSLVRTDTNMRKITSMLPPASTMAAGSRGDEIPSTSGVKATI 456
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 480 (174.0 bits), Expect = 2.0e-45, P = 2.0e-45
Identities = 102/208 (49%), Positives = 136/208 (65%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T I++ VK GGLKLLQI DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRGE
Sbjct: 43 RATMIEILVKDGGLKLLQITDNGHGISKIDLPLLCERFATSKLSKFEDLESIATYGFRGE 102
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKL-----K------DPIKPCAGNQGTQII 420
ALASISH++ L++ITK S AY+A Y++ +L K +P KP AG GTQII
Sbjct: 103 ALASISHISRLSVITKQPNSKLAYKAYYMNGQLCSSNFKSSNTNVEP-KPIAGKDGTQII 161
Query: 421 AEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSS 480
EDLFYNIP+R + LK S+E+ KI D+V RYA+H +VGF+ KK + L + T
Sbjct: 162 VEDLFYNIPSRLRGLKSKSDEFAKILDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQMP 221
Query: 481 HSEVIGNIYGNNISRRVRRFSSASQSAL 508
E I +YG+ I+ + S L
Sbjct: 222 IKERIRVVYGSAIANELLEIDGISNDEL 249
Score = 421 (153.3 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 81/127 (63%), Positives = 106/127 (83%)
Query: 1 MDQPP-KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQ 59
M +P IK+LDE+V+N+IAAGE+I +PANALKE+LENS+DA++T I++ VK GGLKLLQ
Sbjct: 1 MSEPTCTIKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQ 60
Query: 60 IQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
I DNG GI K D+ ++CERF TSKL++FEDL SI+T+GFRGEALASISH++ L++ITK
Sbjct: 61 ITDNGHGISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQP 120
Query: 120 TSPCAYR 126
S AY+
Sbjct: 121 NSKLAYK 127
Score = 277 (102.6 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 171 PLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG--TDDAFQLKVTGWITNVNFSTKK- 227
PL + +P I ER ++ +++ N ELL ++G D+ +KV+G +TN N++ KK
Sbjct: 210 PLQQVNTRPQMPIKERIRVVYGSAIAN-ELLEIDGISNDELGLVKVSGVMTNANYNNKKK 268
Query: 228 MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
+ ++FIN+ P+KR I V+S +LPKGS F YLSL + P+N+DVNVHPTK EV
Sbjct: 269 IQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFYYLSLEIKPENLDVNVHPTKREVR 328
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
FL+ED II+ + S + L +TSR F TQS
Sbjct: 329 FLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQS 360
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 522 (188.8 bits), Expect = 3.9e-50, P = 3.9e-50
Identities = 109/196 (55%), Positives = 136/196 (69%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK+GGLKLLQI DNG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEA
Sbjct: 67 STSIEILVKEGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI-------KPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTADSSCAWRAHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K + I T V + + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDAGVSISTAVALNTIDRI 246
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + FS
Sbjct: 247 RQIHGSAVANELVEFS 262
Score = 438 (159.2 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 84/124 (67%), Positives = 106/124 (85%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK+GGLKLLQI D
Sbjct: 27 KPRKIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 258 (95.9 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 60/142 (42%), Positives = 85/142 (59%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ +G +TN N+ K+ T LLFIN+ IKR +EQ Y+ +LPK
Sbjct: 257 ELVEFSVKDEKLGFTSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P +DVNVHPTK EV+FL+ED II+ + + + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQ 376
Query: 313 ST--SIQVTVKQGGLKLLQIQD 332
+ SIQ T K+ Q+QD
Sbjct: 377 TLLPSIQ-TPKRSS----QVQD 393
Score = 46 (21.3 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 156 KEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K Q +EH + P ++++ + K++ A +E+A L L
Sbjct: 697 KRRVQLASALEHVIFPALRARLVATTKLLRGA--VEVADLKGL 737
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 522 (188.8 bits), Expect = 3.9e-50, P = 3.9e-50
Identities = 109/196 (55%), Positives = 136/196 (69%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI++ VK+GGLKLLQI DNG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEA
Sbjct: 67 STSIEILVKEGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEA 126
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI-------KPCAGNQGTQIIAEDLF 425
LASISH+AHLT+ TKT S CA+RA Y D KL P K AG GTQI EDLF
Sbjct: 127 LASISHIAHLTVTTKTADSSCAWRAHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLF 186
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
YN+PTRR+A + SEEY KI DVV RYAVH V F+ +K + I T V + + I
Sbjct: 187 YNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDAGVSISTAVALNTIDRI 246
Query: 486 GNIYGNNISRRVRRFS 501
I+G+ ++ + FS
Sbjct: 247 RQIHGSAVANELVEFS 262
Score = 438 (159.2 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 84/124 (67%), Positives = 106/124 (85%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+P KI+ LD VVN+IAAGE+I P +ALKEL+EN++DA STSI++ VK+GGLKLLQI D
Sbjct: 27 KPRKIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITD 86
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
NG GI ++D+ I+CERFTTSKL +FEDL+SI+T+GFRGEALASISH+AHLT+ TKT S
Sbjct: 87 NGHGIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSS 146
Query: 123 CAYR 126
CA+R
Sbjct: 147 CAWR 150
Score = 258 (95.9 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 60/142 (42%), Positives = 85/142 (59%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ D+ +G +TN N+ K+ T LLFIN+ IKR +EQ Y+ +LPK
Sbjct: 257 ELVEFSVKDEKLGFTSSGLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPK 316
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
G PFVY+ L ++P +DVNVHPTK EV+FL+ED II+ + + + L ++SR F TQ
Sbjct: 317 GGHPFVYIDLEIEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQ 376
Query: 313 ST--SIQVTVKQGGLKLLQIQD 332
+ SIQ T K+ Q+QD
Sbjct: 377 TLLPSIQ-TPKRSS----QVQD 393
Score = 46 (21.3 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 156 KEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
K Q +EH + P ++++ + K++ A +E+A L L
Sbjct: 697 KRRVQLASALEHVIFPALRARLVATTKLLRGA--VEVADLKGL 737
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 496 (179.7 bits), Expect = 6.0e-47, P = 6.0e-47
Identities = 93/178 (52%), Positives = 127/178 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ + VK GG+K+LQI DNG GI K+D+ I+CERFTTSKL FEDL+ I T+GFRGEA
Sbjct: 85 ATNVDILVKDGGIKMLQISDNGCGIMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEA 144
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISH+A L ++TKTK + CA++A Y + + KP AG GT I+ +DLFYN+P+R
Sbjct: 145 LASISHIARLHVVTKTKENQCAWKAVYENGVMVGEPKPTAGKDGTTILVQDLFYNVPSRL 204
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
+AL+ PSEE+ KI DVV +YA+H+ VGF+ KK E + SS S+ I ++G
Sbjct: 205 RALRSPSEEFAKIVDVVGKYAIHSDGVGFSCKKFGETQYALNVRGTSSKSDKIRAVFG 262
Score = 417 (151.9 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 77/126 (61%), Positives = 102/126 (80%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M P +IK L+ +VVN+IAAGE+I P NALKE++ENS+DA +T++ + VK GG+K+LQI
Sbjct: 43 MHLPSRIKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQI 102
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
DNG GI K+D+ I+CERFTTSKL FEDL+ I T+GFRGEALASISH+A L ++TKTK
Sbjct: 103 SDNGCGIMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEALASISHIARLHVVTKTKE 162
Query: 121 SPCAYR 126
+ CA++
Sbjct: 163 NQCAWK 168
Score = 243 (90.6 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 50/102 (49%), Positives = 72/102 (70%)
Query: 215 TGWITNVNFSTKK-MTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+G IT +F+ KK + + FINN P++R + QVYS +LPKG+ PF+Y+SL + P+
Sbjct: 286 SGQITTPDFNNKKSIPAVFFINNRLVSCDPLRRALSQVYSNFLPKGNKPFIYMSLHITPE 345
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF 309
NVDVNVHPTK EV FL+E+ +IER+ ++L + L +TSR F
Sbjct: 346 NVDVNVHPTKREVRFLYEEELIERIGNLLHERLSQLDTSRTF 387
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 490 (177.5 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 91/188 (48%), Positives = 132/188 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I + VK+GG+K+LQI DNG+GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEA
Sbjct: 41 ATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEA 100
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASISHVA +T+ TK K CA+R SY + K+ + KP AG GT I+ EDLF+NIP+R
Sbjct: 101 LASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRL 160
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+AL+ ++EY+KI DVV RYA+H+ +GF+ KK ++ + + + + I ++ +
Sbjct: 161 RALRSHNDEYSKILDVVGRYAIHSKDIGFSCKKFGDSNYSLSVKPSYTVQDRIRTVFNKS 220
Query: 493 ISRRVRRF 500
++ + F
Sbjct: 221 VASNLITF 228
Score = 413 (150.4 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK LD +VVN+IAAGE+I P NALKE++ENS+DA +T I + VK+GG+K+LQI DNG+
Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K D+ I+CERFTTSKL +FEDL+ I T+GFRGEALASISHVA +T+ TK K CA+
Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123
Query: 126 R 126
R
Sbjct: 124 R 124
Score = 244 (91.0 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 58/146 (39%), Positives = 84/146 (57%)
Query: 178 QPSEKIVERACLLEIASL-NNLELLSVEGTDDAFQLKVTGWITNVNFSTKK-MTFLLFIN 235
+PS + +R + S+ +NL + +D V G + N+NF +KK ++ + FIN
Sbjct: 204 KPSYTVQDRIRTVFNKSVASNLITFHISKVEDLNLESVDGKVCNLNFISKKSISPIFFIN 263
Query: 236 NPI------KRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTII 289
N + +R + VYS YLPKG+ PF+YL + +DP VDVNVHPTK EV FL +D II
Sbjct: 264 NRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEII 323
Query: 290 ERVQSMLEKTLLGSNTSRVFYTQSTS 315
E++ + L L +TSR F S S
Sbjct: 324 EKIANQLHAELSAIDTSRTFKASSIS 349
Score = 45 (20.9 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 18/98 (18%), Positives = 39/98 (39%)
Query: 153 IGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQL 212
+G +E++ ++H L + ++ + L + A+ + L S +DD
Sbjct: 539 VGVVDEERRLAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGKINLQSTNVSDDIVLY 598
Query: 213 KVTGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIYL 250
+ +N K + I + + M+ + YSI L
Sbjct: 599 NLLSEFDELNDDASKEKIISKIWD-MSSMLNEYYSIEL 635
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 454 (164.9 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 85/183 (46%), Positives = 129/183 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++S+ V VK GGLKL+Q+ D+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEA
Sbjct: 54 ASSVSVAVKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEA 113
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++V H+T+ T T+ YR SY D +++ KPCA +GTQ++ E+LFYN+ R+
Sbjct: 114 LASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARK 173
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D +SR+AVH+ +V F+ +K N AD+ + SS + I ++YG +
Sbjct: 174 KTLQNSNDDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGAS 233
Query: 493 ISR 495
+ R
Sbjct: 234 VVR 236
Score = 396 (144.5 bits), Expect = 5.6e-61, Sum P(2) = 5.6e-61
Identities = 75/124 (60%), Positives = 103/124 (83%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PP+I++L+E+VVNRIAAGEVIQRP++A+KEL+ENSLDA ++S+ V VK GGLKL+Q+ D
Sbjct: 14 EPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSD 73
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR ED+ I+CER TTSKL+ +EDL +I + GFRGEALAS+++V H+T+ T T+
Sbjct: 74 DGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQL 133
Query: 123 CAYR 126
YR
Sbjct: 134 HGYR 137
Score = 260 (96.6 bits), Expect = 5.6e-61, Sum P(2) = 5.6e-61
Identities = 52/122 (42%), Positives = 84/122 (68%)
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGS 254
+S E D+ K+ G+I+N N+ KK+T +LFIN+ +KR IE VYS LP+ S
Sbjct: 243 VSYEDAADSI-FKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQAS 301
Query: 255 FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQST 314
PF+Y+S+ + ++VDVN+HPTK EV L+++ IIE +++ +E+ L+ SNT+R+F TQ+
Sbjct: 302 KPFIYMSIHLPSEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQAL 361
Query: 315 SI 316
++
Sbjct: 362 NL 363
Score = 63 (27.2 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 149 DKEQIGDKE----EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
D+E + + E +++W T++H L P M+ +P + + +++ASL L
Sbjct: 666 DQELLAEAEAAWAQREW--TIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKL 717
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 466 (169.1 bits), Expect = 9.7e-44, P = 9.7e-44
Identities = 91/192 (47%), Positives = 135/192 (70%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI V VK GGLKL+Q+ D+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEA
Sbjct: 65 SSSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEA 124
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+++VAH+T+ T TK YR SY D ++ K CA +GTQI+ E+LFYN+ RR
Sbjct: 125 LASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARR 184
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
K L+ +++Y KI D++SR A+H +V F+ +K AD+ + V+ S + I ++YG +
Sbjct: 185 KTLQNSADDYGKIVDLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVS 244
Query: 493 ISRRVRRFSSAS 504
+++ + + +S
Sbjct: 245 VAKNLMKVEVSS 256
Score = 426 (155.0 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 83/124 (66%), Positives = 106/124 (85%)
Query: 3 QPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQD 62
+PPKI++L+E+VVNRIAAGEVIQRP +A+KEL+ENSLDA S+SI V VK GGLKL+Q+ D
Sbjct: 25 EPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSD 84
Query: 63 NGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
+G GIR+ED+ I+CER TTSKLT+FEDL S+S+ GFRGEALAS+++VAH+T+ T TK
Sbjct: 85 DGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 144
Query: 123 CAYR 126
YR
Sbjct: 145 HGYR 148
Score = 228 (85.3 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 53/134 (39%), Positives = 82/134 (61%)
Query: 194 SLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYS 247
+L +E+ S + + F ++ G+I+N N+ KK +LFIN+ +KR IE VY+
Sbjct: 248 NLMKVEVSSCDSSGCTFDME--GFISNSNYVAKKTILVLFINDRLVECSALKRAIEIVYA 305
Query: 248 IYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
LPK S PFVY+S+ + ++VD+N+HPTK EV L+++ IIE +QS +E L +N +R
Sbjct: 306 ATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTR 365
Query: 308 VFYTQSTS-IQVTV 320
F Q IQ T+
Sbjct: 366 TFQEQKVEYIQSTL 379
Score = 60 (26.2 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 149 DKEQIGDKE----EKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
D++ + D E +++W +++H L P M+ +P + +++ASL L
Sbjct: 679 DQDLLSDAENAWAQREW--SIQHVLFPSMRLFLKPPASMASNGTFVKVASLEKL 730
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 487 (176.5 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 104/212 (49%), Positives = 138/212 (65%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+I+R S L++ L S + ST I VTVK GG KLLQI DNG+GIRKED+ I+C
Sbjct: 55 VIQRPASALKEMLENSLDAG-----STQISVTVKDGGNKLLQITDNGSGIRKEDLAILCH 109
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSKL+QFEDL +IST GFRGEAL SIS V+H+ + T + + +R +Y DS ++ P
Sbjct: 110 RHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTTMARDAQYGFRVTYKDSAMEAP 169
Query: 408 -IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN-PHVGFTLKK 465
KP A GT I EDLFYN+PTRRKALK SEEY I D + RYAV++ P VGF+ ++
Sbjct: 170 GPKPVAAVPGTTITVEDLFYNVPTRRKALKSASEEYGLILDTLGRYAVYSAPGVGFSCRR 229
Query: 466 QNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ DI T S + + +YG +++R +
Sbjct: 230 HGDGRPDISTTAAGSRLDAVRAVYGADVAREL 261
Score = 419 (152.6 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 86/127 (67%), Positives = 101/127 (79%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I+KLDE VVN+IAAGEVIQRPA+ALKE+LENSLDA ST I VTVK GG KLLQI DN
Sbjct: 36 PAIIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQITDN 95
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 123
G+GIRKED+ I+C R TTSKL+QFEDL +IST GFRGEAL SIS V+H+ + T + +
Sbjct: 96 GSGIRKEDLAILCHRHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTTMARDAQY 155
Query: 124 AYRWCTY 130
+R TY
Sbjct: 156 GFR-VTY 161
Score = 227 (85.0 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 49/116 (42%), Positives = 73/116 (62%)
Query: 212 LKVTGWITNVNF-STKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCM 264
+K+ G I+ N+ S KK +LFIN P++R +E VY+ LPK S P+++L L +
Sbjct: 284 IKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPKASKPWLFLDLRL 343
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTV 320
P+ V+VN+HPTK EV F+H+ +IE ++ +E LL SN SR F T +T+ TV
Sbjct: 344 PPRQVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKLLASNDSRTFATGATATLQTV 399
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 476 (172.6 bits), Expect = 3.0e-45, P = 3.0e-45
Identities = 104/230 (45%), Positives = 148/230 (64%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
IIER ++ + K L+ ++ STSI V +K GGLKLLQI DNG+GI+ +D+ +C+
Sbjct: 25 IIERPENAI-KELIENSLD----AGSTSIDVLLKDGGLKLLQITDNGSGIQYDDLPYLCQ 79
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
RF+TSK+ F DL + TFGFRGEALASISHVA +T++TK + A++A Y+D L P
Sbjct: 80 RFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAWKAFYVDGALA-P 138
Query: 408 I--------KPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHV 459
I +PCAG QGT I AEDLFYN+ +R+ ALK SEE+ +I +V +YA+HN V
Sbjct: 139 ISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEEFRRIMILVQKYAIHNDQV 198
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS-SASQSAL 508
F KK + +A + + S ++ I +IYG ++ +R FS QS++
Sbjct: 199 SFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFSLGEGQSSI 248
Score = 391 (142.7 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 74/121 (61%), Positives = 98/121 (80%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+ LD+ V+N+IAAGE+I+RP NA+KEL+ENSLDA STSI V +K GGLKLLQI DNG+
Sbjct: 8 KIRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLLQITDNGS 67
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI+ +D+ +C+RF+TSK+ F DL + TFGFRGEALASISHVA +T++TK + A+
Sbjct: 68 GIQYDDLPYLCQRFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAW 127
Query: 126 R 126
+
Sbjct: 128 K 128
Score = 199 (75.1 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 44/116 (37%), Positives = 65/116 (56%)
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPF 257
EG G+I+N +F KK +LFINN ++ +E+ Y+ YL KG+ F
Sbjct: 243 EGQSSIVGFSANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHKGASYF 302
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
VYLSL M P+ +DVNVHP+K VHFL++ I + L + L ++T R + Q+
Sbjct: 303 VYLSLNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQA 358
>UNIPROTKB|I3LT92 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:CU993803
Ensembl:ENSSSCT00000027443 Uniprot:I3LT92
Length = 687
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 107/159 (67%), Positives = 125/159 (78%)
Query: 339 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRAS 398
KED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYRA
Sbjct: 1 KEDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYRAH 60
Query: 399 YIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPH 458
Y D KLK P KPCAGNQGTQI EDLFYNI TRRKALK PSEEY KI +VV RY++HN
Sbjct: 61 YSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHNSG 120
Query: 459 VGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ F++KKQ E +AD+RT N++ + I +I+GN +SR +
Sbjct: 121 ISFSVKKQGETVADVRTLPNATTVDNIRSIFGNAVSREL 159
Score = 316 (116.3 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 64/120 (53%), Positives = 81/120 (67%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI-----KRMIEQVYSIYLPKG 253
EL+ VE D K+ G+I+N N+S KK FLLFIN I + I VY+ Y PK
Sbjct: 158 ELIEVECEDKTLAFKMNGYISNANYSVKKCIFLLFINRNIDSSNLRACIATVYAAYFPKQ 217
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
+ P + SL + P+NVDVNVHPTKHEVHFLHED+I+ERVQ +E LLGSN SR ++TQ+
Sbjct: 218 AHPSLSTSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQT 277
Score = 235 (87.8 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 46/58 (79%), Positives = 49/58 (84%)
Query: 69 KEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
KED+DIVCERFTTSKL FEDL IST+GFRGEALASISHVAH+TI TKT CAYR
Sbjct: 1 KEDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 58
Score = 57 (25.1 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 144 QYLQRDKEQIGDKEE------KQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNN 197
QY+ + G + E W TVEH + +S P + E +L++A+L +
Sbjct: 620 QYISEESTLSGQQSEAPGSTPNPWKWTVEHVVYKAFRSYLLPPKCFTEDGNILQLANLPD 679
Query: 198 L 198
L
Sbjct: 680 L 680
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 438 (159.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 91/188 (48%), Positives = 124/188 (65%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI + + +GGLK LQI D+G GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEA
Sbjct: 86 SSSISIHLNKGGLKSLQIIDDGDGIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEA 145
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASISHV++LTI +K + SP Y +Y D K +D C+G GT I +DLFYN+P R
Sbjct: 146 LASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPAR 205
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
K + P++EYNK +V+ +YA+H P+V FT KK N D+ T + IG G
Sbjct: 206 LKTMN-PNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQ---KVGKGIGGYAGI 261
Query: 492 NISRRVRR 499
I ++ R+
Sbjct: 262 YIIKKKRK 269
Score = 393 (143.4 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA S+SI + + +GGLK LQI D+G
Sbjct: 49 RIIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGD 108
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEALASISHV++LTI +K + SP Y
Sbjct: 109 GIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCY 168
Query: 126 RWCTY 130
C Y
Sbjct: 169 T-CNY 172
Score = 187 (70.9 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 61/209 (29%), Positives = 101/209 (48%)
Query: 149 DKEQIGDKEEKQ-WYRTVEHTLVPLMKSQYQPSEKIVERA-CLLEIASLNNL--ELLSV- 203
DKE + + Y +E ++ K + EK + C+++ N+ EL ++
Sbjct: 367 DKEATDNPDASSCMYNELEKKILEEEKYLDENYEKHLNNVRCVIQKVYGRNISKELSTIF 426
Query: 204 --EGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSF 255
E + F K G I+N ++ KK ++ FIN N IK+ E YS +L KG++
Sbjct: 427 LKEKSIPTF-FKCYGLISNPTYNGKKGCYIFFINDRLVESNIIKKSCENQYSNFLAKGNY 485
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
P++YLSL + VD+NVHPTK EVHFL+++ I + +++ L + R F
Sbjct: 486 PWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTFNITGEK 545
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
+ T L I + I+KED ++
Sbjct: 546 LLQTK-------LDINSSMLEIKKEDKEL 567
Score = 39 (18.8 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 484 VIGNIYGNNISRRV 497
VI +YG NIS+ +
Sbjct: 409 VIQKVYGRNISKEL 422
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 438 (159.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 91/188 (48%), Positives = 124/188 (65%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+SI + + +GGLK LQI D+G GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEA
Sbjct: 86 SSSISIHLNKGGLKSLQIIDDGDGIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEA 145
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
LASISHV++LTI +K + SP Y +Y D K +D C+G GT I +DLFYN+P R
Sbjct: 146 LASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPAR 205
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGN 491
K + P++EYNK +V+ +YA+H P+V FT KK N D+ T + IG G
Sbjct: 206 LKTMN-PNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQ---KVGKGIGGYAGI 261
Query: 492 NISRRVRR 499
I ++ R+
Sbjct: 262 YIIKKKRK 269
Score = 393 (143.4 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL E +NRIAAGEVI RP NALKEL+ENSLDA S+SI + + +GGLK LQI D+G
Sbjct: 49 RIIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGD 108
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI KED+ IVCERFTTSK++ +D+ +I TFGFRGEALASISHV++LTI +K + SP Y
Sbjct: 109 GIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCY 168
Query: 126 RWCTY 130
C Y
Sbjct: 169 T-CNY 172
Score = 187 (70.9 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 61/209 (29%), Positives = 101/209 (48%)
Query: 149 DKEQIGDKEEKQ-WYRTVEHTLVPLMKSQYQPSEKIVERA-CLLEIASLNNL--ELLSV- 203
DKE + + Y +E ++ K + EK + C+++ N+ EL ++
Sbjct: 367 DKEATDNPDASSCMYNELEKKILEEEKYLDENYEKHLNNVRCVIQKVYGRNISKELSTIF 426
Query: 204 --EGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSF 255
E + F K G I+N ++ KK ++ FIN N IK+ E YS +L KG++
Sbjct: 427 LKEKSIPTF-FKCYGLISNPTYNGKKGCYIFFINDRLVESNIIKKSCENQYSNFLAKGNY 485
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
P++YLSL + VD+NVHPTK EVHFL+++ I + +++ L + R F
Sbjct: 486 PWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTFNITGEK 545
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
+ T L I + I+KED ++
Sbjct: 546 LLQTK-------LDINSSMLEIKKEDKEL 567
Score = 39 (18.8 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 484 VIGNIYGNNISRRV 497
VI +YG NIS+ +
Sbjct: 409 VIQKVYGRNISKEL 422
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 439 (159.6 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 93/179 (51%), Positives = 119/179 (66%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST+I V + +GGLK +QI D+G GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEA
Sbjct: 54 STNISVQLNKGGLKSVQIIDDGDGIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEA 113
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSK--LKDPIKPCAGNQGTQIIAEDLFYNIPT 430
LASISHV++LTI TK + S Y SY D K K+P C+G GT I +DLFYN+ T
Sbjct: 114 LASISHVSYLTITTKKRKSSSCYTCSYKDGKPTQKEPTA-CSGKDGTIIRFDDLFYNMKT 172
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIY 489
R K L ++EYNK DV+ +Y++H PHV FT KK N+ D+ T IG IY
Sbjct: 173 RLKTLNH-NDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLSTYNAGKGIGGIGGIY 230
Score = 384 (140.2 bits), Expect = 4.3e-52, Sum P(2) = 4.3e-52
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I KL + +NRIAAGEVI RP NALKEL+ENSLDA ST+I V + +GGLK +QI D+G
Sbjct: 17 RIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 76
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI K+D+ IVCERFTTSK++ +D+ SI TFGFRGEALASISHV++LTI TK + S Y
Sbjct: 77 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCY 136
Query: 126 RWCTY 130
C+Y
Sbjct: 137 T-CSY 140
Score = 193 (73.0 bits), Expect = 4.3e-52, Sum P(2) = 4.3e-52
Identities = 41/113 (36%), Positives = 67/113 (59%)
Query: 213 KVTGWITNVNFSTKKMTFLLFIN------NPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
K G I+ ++++KK +++ FIN N +KR E Y+ +L KG++P+VYL+L +
Sbjct: 334 KCYGLISGPSYNSKKSSYIFFINDRLVESNILKRACENQYNNFLGKGNYPWVYLALRLKY 393
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
VD+NVHPTK EVHFL++D I + +E+ L N R + + ++ T
Sbjct: 394 DIVDINVHPTKKEVHFLYQDEIATLISKKIEQVLKNINNMRSYNAPTVNLLQT 446
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 457 (165.9 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 87/182 (47%), Positives = 122/182 (67%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V ++ GGLKLLQ+ DNG GI +ED +VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 40 ATEIMVNMQNGGLKLLQVSDNGKGIEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVA + I++K + CAY+A+++D K+ KP AG GT I A DLFYN+PTRR
Sbjct: 100 LASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ EE + D + R+A+H P V F L+ QN+ D RT + + +V+ N+ G +
Sbjct: 160 NKMTTHGEEAKMVNDTLLRFAIHRPDVSFALR-QNQ-AGDFRTKGDGNFRDVVCNLLGRD 217
Query: 493 IS 494
++
Sbjct: 218 VA 219
Score = 385 (140.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 73/120 (60%), Positives = 95/120 (79%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L + VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I V ++ GGLKLLQ+ DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +ED +VCERF TSKL +FEDL + T+GFRGEALAS+SHVA + I++K + CAY+
Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123
Score = 108 (43.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 222 NFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
N T + F +FIN +K I++V F ++L + D +DVNVHP
Sbjct: 254 NRKTSRSFFSVFINGRSVRCDILKHPIDEVLGARQLHAQFCALHLQI--DETRIDVNVHP 311
Query: 276 TKHEVHFLHEDTIIERVQSMLEKTL 300
TK+ V FL ++ IIE +++ EK +
Sbjct: 312 TKNSVIFLEKEEIIEEIRAYFEKVI 336
Score = 55 (24.4 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 143 SQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+ ++ DK+ I W ++ L+PL+K ++ P E + + ++A ++L
Sbjct: 695 TNFITLDKK-ISAFSATPWKTLIKEVLMPLVKRKFIPPEHFKQAGVIRQLADSHDL 749
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 457 (165.9 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 87/182 (47%), Positives = 122/182 (67%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T I V ++ GGLKLLQ+ DNG GI +ED +VCERF TSKL +FEDL + T+GFRGEA
Sbjct: 40 ATEIMVNMQNGGLKLLQVSDNGKGIEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LAS+SHVA + I++K + CAY+A+++D K+ KP AG GT I A DLFYN+PTRR
Sbjct: 100 LASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRR 159
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNN 492
+ EE + D + R+A+H P V F L+ QN+ D RT + + +V+ N+ G +
Sbjct: 160 NKMTTHGEEAKMVNDTLLRFAIHRPDVSFALR-QNQ-AGDFRTKGDGNFRDVVCNLLGRD 217
Query: 493 IS 494
++
Sbjct: 218 VA 219
Score = 385 (140.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 73/120 (60%), Positives = 95/120 (79%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L + VVNR+AAGEV+ RP NA+KEL+ENSLDA +T I V ++ GGLKLLQ+ DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I +ED +VCERF TSKL +FEDL + T+GFRGEALAS+SHVA + I++K + CAY+
Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123
Score = 108 (43.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 222 NFSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHP 275
N T + F +FIN +K I++V F ++L + D +DVNVHP
Sbjct: 254 NRKTSRSFFSVFINGRSVRCDILKHPIDEVLGARQLHAQFCALHLQI--DETRIDVNVHP 311
Query: 276 TKHEVHFLHEDTIIERVQSMLEKTL 300
TK+ V FL ++ IIE +++ EK +
Sbjct: 312 TKNSVIFLEKEEIIEEIRAYFEKVI 336
Score = 55 (24.4 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 143 SQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNL 198
+ ++ DK+ I W ++ L+PL+K ++ P E + + ++A ++L
Sbjct: 695 TNFITLDKK-ISAFSATPWKTLIKEVLMPLVKRKFIPPEHFKQAGVIRQLADSHDL 749
>UNIPROTKB|E9PCU2 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 GO:GO:0005524 GO:GO:0005634
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AC006583 KO:K08734 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 RefSeq:NP_001161089.1
UniGene:Hs.195364 DNASU:4292 GeneID:4292 KEGG:hsa:4292 CTD:4292
HGNC:HGNC:7127 ChiTaRS:Mlh1 GenomeRNAi:4292 NextBio:16893
IPI:IPI00924824 ProteinModelPortal:E9PCU2 SMR:E9PCU2 PRIDE:E9PCU2
Ensembl:ENST00000435176 UCSC:uc011ayc.2 ArrayExpress:E9PCU2
Bgee:E9PCU2 Uniprot:E9PCU2
Length = 658
Score = 428 (155.7 bits), Expect = 7.5e-40, P = 7.5e-40
Identities = 84/127 (66%), Positives = 98/127 (77%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
RRKALK PSEEY KI +VV RY+VHN + F++KKQ E +AD+RT N+S + I +I+G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 491 NNISRRV 497
N +SR +
Sbjct: 124 NAVSREL 130
Score = 341 (125.1 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 65/121 (53%), Positives = 89/121 (73%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 129 ELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPK 188
Query: 253 GSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
+ PF+YLSL + P+NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 189 NTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 248
Query: 313 S 313
+
Sbjct: 249 T 249
Score = 99 (39.9 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 20/26 (76%), Positives = 21/26 (80%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYR 126
EALASISHVAH+TI TKT CAYR
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYR 29
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 310 (114.2 bits), Expect = 4.2e-25, P = 4.2e-25
Identities = 74/205 (36%), Positives = 116/205 (56%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IE S++++ + S + +T + V K GGL LL+I DNGTGI ED++ +
Sbjct: 20 VIESAHSVVKELMENSMDA-----SATQVDVESKDGGLSLLRITDNGTGIEPEDLEPALK 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A++ + K+ +
Sbjct: 75 RHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAWKTRSVAGKISEK 134
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ G GT+I+ E+LF+N P RRK LK E KI D V+ A+ V F L +
Sbjct: 135 -EEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDG 193
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNN 492
+ + + T N E I +++G N
Sbjct: 194 KEVFVLPTRENKK--ERIIDLFGEN 216
Score = 302 (111.4 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 59/121 (48%), Positives = 87/121 (71%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI++L ++N+IAAGEVI+ + +KEL+ENS+DA +T + V K GGL LL+I DNGT
Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI ED++ +R TSK+ ++DL S+ ++GFRGEALASI+ V+ LT+ + TK A+
Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122
Query: 126 R 126
+
Sbjct: 123 K 123
Score = 135 (52.6 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 212 LKVTGWITNVNFSTKKMTF-LLFINN-PIKR-----MIEQVYSIYLPKGSFPFVYLSLCM 264
++ TG+I++ +F T +FIN PI+ ++++ Y LP P+ +L +
Sbjct: 231 IQATGYISDPDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFEI 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
DP VDVNVHP K E+ FL ED ++++K L S
Sbjct: 291 DPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQKELRSS 329
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 336 (123.3 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 82/225 (36%), Positives = 124/225 (55%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ ++ I+V + QGG K ++IQD+G GI ED+ + E
Sbjct: 19 VVERPASVV-KELIENSID----AHASCIRVDILQGGAKQIRIQDDGDGIHPEDLVLALE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR S I K+ P
Sbjct: 74 RHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMTP 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A QGT I +DLFYN P RRK L+ P+ E+ I ++ R A+ + F L
Sbjct: 134 V-PAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLLHHNE 192
Query: 468 ENLADIRTNVNSSHSEV-IGNIYGNNISRRVRRFSSASQSALARK 511
+ + ++ S E I +I G+ + SQS L K
Sbjct: 193 KEIIHFKSATTISGQENRIKSILGDVFMQSALAIEF-SQSGLTLK 236
Score = 317 (116.6 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 60/120 (50%), Positives = 89/120 (74%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I++L++ N+IAAGEV++RPA+ +KEL+ENS+DA ++ I+V + QGG K ++IQD+G G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ED+ + ER TSK+ + +DL I+T GFRGEALASIS V+ LT+ ++ K + YR
Sbjct: 63 IHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMGYR 122
Score = 107 (42.7 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 44/149 (29%), Positives = 65/149 (43%)
Query: 201 LSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKG 253
L++E + LK G+I ++ + +++N R + Q Y L G
Sbjct: 224 LAIEFSQSGLTLK--GYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHG 281
Query: 254 SFPFVYLSLCMDPKNVDVNVHPTKHEVHFLH----EDTIIERVQSMLEKTLLGS----NT 305
P L L +DP VD+NVHPTKHEV F D +I V++ L + G
Sbjct: 282 RHPAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIVHPLPQ 341
Query: 306 SRVFYTQSTSIQVT--VK-QGGLKLLQIQ 331
S Y T+ T ++ QG L L+Q Q
Sbjct: 342 STAEYNPITNFAPTPLIEGQGNLSLIQEQ 370
Score = 39 (18.8 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHN 456
R +L +P N I DV++ HN
Sbjct: 477 RHPSLLKPKNLENLIRDVLADLITHN 502
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 300 (110.7 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 61/117 (52%), Positives = 84/117 (71%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+KLD+ + N IAAGEV++RPA+ +KEL+ENS+DA STSI++ +++ GL ++I DNG
Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSP 122
GI +ED + ER TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P
Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP 119
Score = 283 (104.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 73/212 (34%), Positives = 116/212 (54%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ STSI++ +++ GL ++I DNG GI +ED + E
Sbjct: 20 VVERPASVV-KELVENSID----ANSTSIEIHLEEAGLSKIRIIDNGDGIAEEDCIVAFE 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ DL I T GFRGEAL SI+ V+ L +IT T +P +++ K D
Sbjct: 75 RHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP----GTHLIIKGGDI 130
Query: 408 IKP--CAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
IK A +GT I ++LF+N P R K +K E I D+V R A+ +P V L
Sbjct: 131 IKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLFH 190
Query: 466 QNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+ L + T+ N +V+ +IY +++++
Sbjct: 191 NEKKL--LHTSGNGDVRQVLASIYSIQVAKKL 220
Score = 132 (51.5 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 38/120 (31%), Positives = 65/120 (54%)
Query: 186 RACLLEIASLNNLE-LLSVEGTDDAFQLKVTGWIT--NVNFSTKK-MTFLL---FINN-P 237
R L I S+ + L+ +E F +K G++T V +++ M+ ++ ++ N
Sbjct: 205 RQVLASIYSIQVAKKLVPIEAESLDFTIK--GYVTLPEVTRASRNYMSTIVNGRYVRNFV 262
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
+ + I+Q Y LP G +P +LS+ MDP VDVNVHP K EV F E +++ ++ L+
Sbjct: 263 LMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQ 322
Score = 38 (18.4 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 235 NNPIKRMIEQVYSIYLPKGSFPFVYLSL 262
N +++++ +YSI + K P SL
Sbjct: 201 NGDVRQVLASIYSIQVAKKLVPIEAESL 228
>TIGR_CMR|CPS_0323 [details] [associations]
symbol:CPS_0323 "DNA mismatch repair protein MutL"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
RefSeq:YP_267089.1 ProteinModelPortal:Q48A24 SMR:Q48A24
STRING:Q48A24 GeneID:3521200 KEGG:cps:CPS_0323 PATRIC:21464033
HOGENOM:HOG000256551 OMA:RMASTHA BioCyc:CPSY167879:GI48-426-MONOMER
Uniprot:Q48A24
Length = 652
Score = 315 (115.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 75/201 (37%), Positives = 114/201 (56%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ +TSI + V +GG+K ++I DNG GI KE++ +
Sbjct: 19 VVERPASVI-KELIENSLD----AGATSIHIDVDKGGIKKIKITDNGHGIVKEELTLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ DL +I + GFRGEALASIS VA LT+ +K ++ A++A +
Sbjct: 74 RHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATAWQAVAEGRDMSVN 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
IKP A GT I DLF+N P RRK L+ E+N I +VV R A+ + V F+L
Sbjct: 134 IKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNHIDEVVRRIALAHFEVSFSLTHNG 193
Query: 468 ENLADIRTNVNSSHSEVIGNI 488
+ R + S+H++ I +
Sbjct: 194 NTVRQYR--MASTHAQCIKRV 212
Score = 299 (110.3 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 59/117 (50%), Positives = 84/117 (71%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L + N+IAAGEV++RPA+ +KEL+ENSLDA +TSI + V +GG+K ++I DNG GI K
Sbjct: 6 LPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGHGIVK 65
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
E++ + R TSK+ DL +I + GFRGEALASIS VA LT+ +K ++ A++
Sbjct: 66 EELTLALSRHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATAWQ 122
Score = 134 (52.2 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 212 LKVTGWITNVNFSTKKMTFLL-FINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
+ ++GW+ +FS + ++N + R I Q Y+ LP ++P L L +
Sbjct: 234 MTLSGWLAKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQL 293
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
D + VDVNVHP+KHEV F + + + S+ K L + +T + S V +
Sbjct: 294 DHREVDVNVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADSDLALVPEQS 353
Query: 325 LKLLQIQD 332
L D
Sbjct: 354 YSSLGAND 361
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 301 (111.0 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 59/116 (50%), Positives = 88/116 (75%)
Query: 2 DQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+Q KI+ LD +N+IAAGEVI+RPA+ +KEL++NS+DA +T I++ V++GG + I+
Sbjct: 3 EQGNKIRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIR 62
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
DNG G+ K D + E+ TSKLT+ EDL+++ST GFRGEALASI+ +A + I+T+
Sbjct: 63 DNGCGMSKADALLSYEKHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTR 118
Score = 291 (107.5 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 74/209 (35%), Positives = 119/209 (56%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++ K L+ ++ +T I++ V++GG + I+DNG G+ K D + E
Sbjct: 24 VIERPASVV-KELVDNSID----AGATEIRIEVEKGGKHSILIRDNGCGMSKADALLSYE 78
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
+ TSKLT+ EDL+++ST GFRGEALASI+ +A + I+T+ + K+++
Sbjct: 79 KHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTRPPEELTGTKLVIHGGKVQET 138
Query: 408 IKPCAGNQ-GTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
AG GT + ++LFYN P RRK LK E I D V+R A+ NP + FTL +
Sbjct: 139 SD--AGTAPGTSVYVKELFYNTPARRKYLKSDRTELAHITDTVTRLALANPGISFTLLSE 196
Query: 467 NENLADIRTNVNSSHSEVIGNIYGNNISR 495
+ + IR+ +S + + N+ G + +R
Sbjct: 197 GKPV--IRSTGSSDLFKSLVNLLGPDTAR 223
Score = 126 (49.4 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
I + + Y +PKG +P L+L ++P+ VDVNVHP K EV F E + + V +E
Sbjct: 268 INMAVREGYYTKIPKGRYPVAVLALTLNPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVE 327
Query: 298 KTLLGSNTS-RVFYTQSTSIQVTVKQGGL-KLLQIQD 332
K L + V + +Q T + GL + +Q Q+
Sbjct: 328 KVLSEHGLAPEVREKEGKRLQKTFEDPGLSEKIQPQE 364
>UNIPROTKB|P74925 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243274 "Thermotoga maritima MSB8" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 EMBL:U71053 PIR:H72427
RefSeq:NP_227838.1 ProteinModelPortal:P74925 GeneID:896837
KEGG:tma:TM0022 PATRIC:23934884 OMA:IQTLGFR ProtClustDB:CLSK874928
Uniprot:P74925
Length = 510
Score = 289 (106.8 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 58/119 (48%), Positives = 84/119 (70%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK+L E++V +IAAGEVI P+ LKEL+ENSLDA++ I V ++ GG ++++ DNG
Sbjct: 2 RIKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNGI 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ +E+ + E +TTSK+ EDL+ I T+GFRGEALASI V+ I+TKT+ A
Sbjct: 62 GMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRAKIVTKTEKDALA 120
Score = 253 (94.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 54/150 (36%), Positives = 86/150 (57%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
Q+ I V ++ GG ++++ DNG G+ +E+ + E +TTSK+ EDL+ I T+GFRGE
Sbjct: 38 QADRIVVEIENGGKNMVRVSDNGIGMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGE 97
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
ALASI V+ I+TKT+ A + K+++ I + GT + DLF+N+P R
Sbjct: 98 ALASIVQVSRAKIVTKTEKDALATQLMIAGGKVEE-ISETHRDTGTTVEVRDLFFNLPVR 156
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGF 461
RK+LK + E ++ R+ + V F
Sbjct: 157 RKSLKSSAIELRMCREMFERFVLVRNDVDF 186
Score = 128 (50.1 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 44/196 (22%), Positives = 95/196 (48%)
Query: 180 SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLF-INNPI 238
++ I ERA L+ L +L + ++ L++ G +++ + T F +N
Sbjct: 201 TQNIFERALLI----LEDLRKGYITFEEELSGLRIKGIVSSREVTRSSRTGEYFYVNGRF 256
Query: 239 ---KRMIEQVYSIY-LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQS 294
+ + E + +Y LPK S+P L + ++P+ +DVN+HP+K V FL+E+ + + ++
Sbjct: 257 VVSEELHEVLMKVYDLPKRSYPVAVLFIEVNPEELDVNIHPSKIVVKFLNEEKVKKSLEE 316
Query: 295 MLEKTLLGSNTSRVFYTQSTSIQVTVKQG-GLKLLQIQDNGTGIRKEDMDIVCERFTTSK 353
L++ L V Y + +S ++V + + ++ + ED + + +
Sbjct: 317 TLKRNLARKWYRSVAYEEISSRALSVAEAPSHRWFLVKGKYAVVEVEDGLLFVDLHALHE 376
Query: 354 LTQFEDLNSISTFGFR 369
T +E++ S ++G R
Sbjct: 377 RTIYEEILSKKSWGKR 392
>UNIPROTKB|A6VD59 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:YP_001350994.1
ProteinModelPortal:A6VD59 SMR:A6VD59 STRING:A6VD59 GeneID:5355304
KEGG:pap:PSPA7_5675 PATRIC:19832835
BioCyc:PAER381754:GHMY-5681-MONOMER Uniprot:A6VD59
Length = 633
Score = 310 (114.2 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 61/118 (51%), Positives = 86/118 (72%)
Query: 1 MDQPPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQI 60
M + P+I+ L + N+IAAGEV++RPA+ KELLENSLDA + I V V+QGG+KLL++
Sbjct: 1 MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRV 60
Query: 61 QDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
+D+G GI +D+ + R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T
Sbjct: 61 RDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRT 118
Score = 286 (105.7 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 64/183 (34%), Positives = 105/183 (57%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S+ K LL ++ + I V V+QGG+KLL+++D+G GI +D+ +
Sbjct: 23 VVERPASVA-KELLENSLD----AGARRIDVEVEQGGVKLLRVRDDGRGIPADDLPLALA 77
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ + EDL + + GFRGEALASIS VA LT+ ++T + A++ ++
Sbjct: 78 RHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPR 137
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK L+ E++ + +V+ R A+ V F L+
Sbjct: 138 VQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNG 197
Query: 468 ENL 470
+ +
Sbjct: 198 KTI 200
Score = 107 (42.7 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 31/96 (32%), Positives = 42/96 (43%)
Query: 212 LKVTGWITNVNFSTKKMTFLLF-INNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F +N + R + Q Y L G P L +
Sbjct: 238 LHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEV 297
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DP VDVNVHPTKHEV F + + + L + L
Sbjct: 298 DPAVVDVNVHPTKHEVRFRDSRMVHDFLYGTLHRAL 333
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 271 (100.5 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 54/118 (45%), Positives = 83/118 (70%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ L E + N+IAAGEV++RPA+ +KEL+EN+LDA I V ++ GG +L++I D+
Sbjct: 2 PHRIRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDD 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
G G+ +ED + ER TSK+ +DL S++T GFRGEAL S++ V+ T+ T+ + S
Sbjct: 62 GCGMSREDALMALERHATSKIATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGS 119
Score = 252 (93.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 55/155 (35%), Positives = 88/155 (56%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I V ++ GG +L++I D+G G+ +ED + ER TSK+ +DL S++T GFRGEAL S
Sbjct: 44 IIVEIEGGGRRLIRITDDGCGMSREDALMALERHATSKIATDDDLFSLATLGFRGEALPS 103
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
++ V+ T+ T+ + S K+++ +K C +GT + +LF+N P R K +
Sbjct: 104 VASVSRFTLATRERGSIEGTEIYAEGGKIRE-VKACGMAEGTVVSVRNLFFNTPARLKFM 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
K E +AD+V+R A+ P V FT + L
Sbjct: 163 KSVETEGGHVADLVTRLALSRPEVRFTCVSDGKTL 197
Score = 139 (54.0 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 212 LKVTGWITNVNFSTKKMTFLL-FINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
++VTG + + S + L +IN ++ I Q Y +L +G +P V L + +
Sbjct: 231 VRVTGLVARPDVSRSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEV 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P VDVNVHPTKHEV F + + + +Q +E+TL
Sbjct: 291 SPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVEETL 326
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 271 (100.5 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 54/118 (45%), Positives = 83/118 (70%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ L E + N+IAAGEV++RPA+ +KEL+EN+LDA I V ++ GG +L++I D+
Sbjct: 2 PHRIRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDD 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
G G+ +ED + ER TSK+ +DL S++T GFRGEAL S++ V+ T+ T+ + S
Sbjct: 62 GCGMSREDALMALERHATSKIATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGS 119
Score = 252 (93.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 55/155 (35%), Positives = 88/155 (56%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I V ++ GG +L++I D+G G+ +ED + ER TSK+ +DL S++T GFRGEAL S
Sbjct: 44 IIVEIEGGGRRLIRITDDGCGMSREDALMALERHATSKIATDDDLFSLATLGFRGEALPS 103
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL 435
++ V+ T+ T+ + S K+++ +K C +GT + +LF+N P R K +
Sbjct: 104 VASVSRFTLATRERGSIEGTEIYAEGGKIRE-VKACGMAEGTVVSVRNLFFNTPARLKFM 162
Query: 436 KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
K E +AD+V+R A+ P V FT + L
Sbjct: 163 KSVETEGGHVADLVTRLALSRPEVRFTCVSDGKTL 197
Score = 139 (54.0 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 212 LKVTGWITNVNFSTKKMTFLL-FINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
++VTG + + S + L +IN ++ I Q Y +L +G +P V L + +
Sbjct: 231 VRVTGLVARPDVSRSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEV 290
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
P VDVNVHPTKHEV F + + + +Q +E+TL
Sbjct: 291 SPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVEETL 326
>TIGR_CMR|SO_0601 [details] [associations]
symbol:SO_0601 "DNA mismatch repair protein MutL"
species:211586 "Shewanella oneidensis MR-1" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:NP_716234.1
ProteinModelPortal:Q8EJ70 SMR:Q8EJ70 GeneID:1168468
KEGG:son:SO_0601 PATRIC:23520892 OMA:FTHIDEW Uniprot:Q8EJ70
Length = 631
Score = 297 (109.6 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 61/124 (49%), Positives = 88/124 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA ++ I + + +GG KL++I+DNG+G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I KE++ + R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEA-- 120
Query: 127 WCTY 130
W Y
Sbjct: 121 WQAY 124
Score = 282 (104.3 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 66/191 (34%), Positives = 109/191 (57%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ ++ I + + +GG KL++I+DNG+GI KE++ +
Sbjct: 19 VVERPASVV-KELVENSLD----AGASRIDIEIDKGGSKLIKIRDNGSGIPKEELALALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I +FGFRGEALASIS V+ LT+ ++T A++A ++
Sbjct: 74 RHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGVEMAVK 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ P A G+ I DLF+N P RR+ LK E+ I + + R A+ + FTL
Sbjct: 134 VMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNG 193
Query: 468 ENLADIRTNVN 478
+ + + R +N
Sbjct: 194 KTVRNYRPAMN 204
Score = 110 (43.8 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 36/110 (32%), Positives = 55/110 (50%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINNPI--KRMIEQ-VYSIYLPKGSF 255
E L VE D L+++G++ + + T ++N + R++ V + K
Sbjct: 223 EALRVECQHD--DLRLSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEV 280
Query: 256 --PFVYLSLCMDPKNVDVNVHPTKHEVHFLHE-----DTIIERVQSMLEK 298
P L L +DP VDVNVHP KHEV F H+ D I++ +QS LE+
Sbjct: 281 EQPGYVLMLDIDPHQVDVNVHPAKHEVRF-HQSRYVHDYILQALQSALEE 329
>UNIPROTKB|P23367 [details] [associations]
symbol:mutL species:83333 "Escherichia coli K-12"
[GO:0006298 "mismatch repair" evidence=IEA;IDA;IMP] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0032300 "mismatch repair
complex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000018 "regulation of DNA recombination" evidence=IMP]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 EMBL:U14003
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:L19346 EMBL:Z11831
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000018 eggNOG:COG0323
EMBL:M63655 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 HOGENOM:HOG000256551
PIR:PH0853 RefSeq:NP_418591.1 RefSeq:YP_492312.1 PDB:1B62 PDB:1B63
PDB:1BKN PDB:1NHH PDB:1NHI PDB:1NHJ PDB:1X9Z PDBsum:1B62
PDBsum:1B63 PDBsum:1BKN PDBsum:1NHH PDBsum:1NHI PDBsum:1NHJ
PDBsum:1X9Z ProteinModelPortal:P23367 SMR:P23367 DIP:DIP-10285N
IntAct:P23367 MINT:MINT-1266937 PRIDE:P23367
EnsemblBacteria:EBESCT00000002603 EnsemblBacteria:EBESCT00000002604
EnsemblBacteria:EBESCT00000002605 EnsemblBacteria:EBESCT00000017847
GeneID:12934482 GeneID:948691 KEGG:ecj:Y75_p4056 KEGG:eco:b4170
PATRIC:32123913 EchoBASE:EB1258 EcoGene:EG11281 OMA:FSHIDEI
BioCyc:EcoCyc:EG11281-MONOMER BioCyc:ECOL316407:JW4128-MONOMER
BioCyc:MetaCyc:EG11281-MONOMER EvolutionaryTrace:P23367
Genevestigator:P23367 Uniprot:P23367
Length = 615
Score = 297 (109.6 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 59/124 (47%), Positives = 88/124 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA-- 120
Query: 127 WCTY 130
W Y
Sbjct: 121 WQAY 124
Score = 290 (107.1 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 70/205 (34%), Positives = 114/205 (55%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ +T I + +++GG KL++I+DNG GI+K+++ +
Sbjct: 19 VVERPASVV-KELVENSLD----AGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKD 406
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A++A Y + + +
Sbjct: 74 RHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQA-YAEGRDMNV 132
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
+KP A GT + DLFYN P RRK L+ E+N I +++ R A+ V L
Sbjct: 133 TVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHN 192
Query: 467 NENLADIRTNVNSSHSEV-IGNIYG 490
+ + R E +G I G
Sbjct: 193 GKIVRQYRAVPEGGQKERRLGAICG 217
Score = 109 (43.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 34/101 (33%), Positives = 48/101 (47%)
Query: 212 LKVTGWITNVNFSTKKMTFL--LFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLC 263
L + GW+ + N +T + + ++N + R I Q L P L L
Sbjct: 234 LTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLE 293
Query: 264 MDPKNVDVNVHPTKHEVHF----LHEDTIIERVQSMLEKTL 300
+DP VDVNVHP KHEV F L D I + V S+L++ L
Sbjct: 294 IDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
Score = 37 (18.1 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 152 QIGDKEEKQWYRTVEHTLVPLMKSQY 177
Q GD + W HT L + QY
Sbjct: 230 QHGDLTLRGWVADPNHTTPALAEIQY 255
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 297 (109.6 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 58/121 (47%), Positives = 87/121 (71%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I+ L + N+IAAGEV++RPA+ +KELLENSLD+ + I V V+Q G+KLL+++D+G
Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI +D+ + R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A+
Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141
Query: 126 R 126
+
Sbjct: 142 Q 142
Score = 293 (108.2 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 64/186 (34%), Positives = 105/186 (56%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L S S + I V V+Q G+KLL+++D+G GI +D+ +
Sbjct: 39 VVERPASVIKELLENSLDSG-----ARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALA 93
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSK+ EDL + + GFRGEALASIS VA LT+ ++T+ + A++ +
Sbjct: 94 RHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPR 153
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
++P A GT + DLF+N P RRK LK E++ + +V+ R A+ V F L+
Sbjct: 154 VQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNG 213
Query: 468 ENLADI 473
+ + +
Sbjct: 214 KTMLSL 219
Score = 106 (42.4 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 29/78 (37%), Positives = 35/78 (44%)
Query: 212 LKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
L + GW+ FS + F+N R + Q Y L G P L +
Sbjct: 254 LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEV 313
Query: 265 DPKNVDVNVHPTKHEVHF 282
DP VDVNVHPTKHEV F
Sbjct: 314 DPAAVDVNVHPTKHEVRF 331
>TIGR_CMR|VC_0345 [details] [associations]
symbol:VC_0345 "DNA mismatch repair protein MutL"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 PIR:A82334 RefSeq:NP_229999.1
ProteinModelPortal:Q9KV13 SMR:Q9KV13 DNASU:2615058 GeneID:2615058
KEGG:vch:VC0345 PATRIC:20079763 OMA:YAEGRDQ Uniprot:Q9KV13
Length = 653
Score = 295 (108.9 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 59/124 (47%), Positives = 88/124 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + N+IAAGEV++RPA+ +KEL+ENSLDA +T I + +++GG KL++I+DNG+G
Sbjct: 3 IRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I K+++ + R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A
Sbjct: 63 IDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA-- 120
Query: 127 WCTY 130
W Y
Sbjct: 121 WSAY 124
Score = 283 (104.7 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 70/220 (31%), Positives = 119/220 (54%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++ K L+ ++ +T I + +++GG KL++I+DNG+GI K+++ +
Sbjct: 19 VVERPASVV-KELVENSLD----AGATRIDIDLEKGGAKLIRIRDNGSGIDKDELGLALS 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKD 406
R TSK+ +DL +I + GFRGEALASIS V+ LT+ ++T A+ A Y + + +
Sbjct: 74 RHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEAWSA-YSEGRDMAV 132
Query: 407 PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQ 466
++P A GT + DLF+N P RRK L+ E+ I +++ R A+ V FTL+
Sbjct: 133 KLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIALSRFDVSFTLRHN 192
Query: 467 NENLADIRTNVNSSHSEV-IGNIYGNNISRRVRRFSSASQ 505
+ + R E + + GN + + R Q
Sbjct: 193 GKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQ 232
Score = 108 (43.1 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 212 LKVTGWITNVNFSTKKMTF-LLFINNPIKR------MIEQVYSIYLPKGSFPFVYLSLCM 264
LK+ GWIT + ++ ++N + R I Q Y L F L + +
Sbjct: 234 LKLHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIEL 293
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTII 289
DP VDVNVHP KHEV F H+ ++
Sbjct: 294 DPHQVDVNVHPAKHEVRF-HQARLV 317
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 284 (105.0 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 56/114 (49%), Positives = 83/114 (72%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK LD+ + RIAAGEVI+RP++ +KELLENSLDA + + V +++GG+ +++ D+G G
Sbjct: 3 IKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
I ++ + ER TSKL+ FED+ +IS+ GFRGEAL SI+ VA L ++T +T
Sbjct: 63 IVFSEVLLAFERHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAART 116
Score = 281 (104.0 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 70/210 (33%), Positives = 114/210 (54%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+IER S++ K LL ++ + + V +++GG+ +++ D+G GI ++ + E
Sbjct: 19 VIERPSSVV-KELLENSLD----AGAKRVDVVIREGGIGYIEVSDDGCGIVFSEVLLAFE 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL+ FED+ +IS+ GFRGEAL SI+ VA L ++T +T S ++
Sbjct: 74 RHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESGTYLSLSGGEMVKH 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ A + GT I LF +P R K LK P E +K+++VV YA+ P V FTL
Sbjct: 134 TR-MARSPGTTIKLTRLFSRVPARLKFLKTPQHEASKVSEVVLSYALAYPEVKFTLSIDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
N + T N + + IYGN+++ ++
Sbjct: 193 RNT--LNTPGNGKLRDAVLEIYGNDVASKM 220
Score = 116 (45.9 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 186 RACLLEIASLNNL--ELLSVEGTDD--AFQLKVTGWITNVNFSTKKMTFL-LFINN---- 236
R +LEI N++ ++L +E TD + + ++G ++ S L F+N
Sbjct: 205 RDAVLEIYG-NDVASKMLDLE-TDSYRSSAINISGLVSPPEISRSNRNSLHFFVNRRLIQ 262
Query: 237 --PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQS 294
+++ EQ YS L G +P +++ +D VDVN+HPTK EV F E + VQ
Sbjct: 263 SRALQKAAEQAYSGLLMVGRYPLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQR 322
Query: 295 MLEKTLL 301
+ L+
Sbjct: 323 AVRSVLV 329
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 281 (104.0 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 54/115 (46%), Positives = 85/115 (73%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PKIK+L + V+ +IAAGEV++RP + +KEL+ENSLDAK+ +I V +++GGL + ++D+G
Sbjct: 2 PKIKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEGGLGKIVVEDDG 61
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
GI E++ R TTSK+ F+DL + +FGFRGEAL SI+ V+ ++I ++ +
Sbjct: 62 IGIPPEELPDALLRHTTSKIASFDDLYYLESFGFRGEALYSIAAVSKISIKSRVR 116
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 53/176 (30%), Positives = 95/176 (53%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + S ++ + +I V +++GGL + ++D+G GI E++
Sbjct: 20 VVERPYSVVKELVENSLDAK-----AQNINVYIEEGGLGKIVVEDDGIGIPPEELPDALL 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TTSK+ F+DL + +FGFRGEAL SI+ V+ ++I ++ + Y ++ +
Sbjct: 75 RHTTSKIASFDDLYYLESFGFRGEALYSIAAVSKISIKSRVRGENNGYELIAHAGEVIN- 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
+ GT + DLF+N P R+K LK E I + + A+ P V F+L
Sbjct: 134 LTEVGMAYGTVVTVSDLFFNTPARKKFLKSGQTEAGLIRQFIEKMAILYPGVKFSL 189
Score = 110 (43.8 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
+ + I+ Y LP G P V+L + + VDVNVHP K EV F+ E I V++++
Sbjct: 264 LTKAIDDAYESLLPTGLKPLVFLEVVVPGTWVDVNVHPQKLEVKFMDEQKIYLDVRTIIR 323
Query: 298 KTLLGSNTS 306
L+ + +S
Sbjct: 324 NKLVNAKSS 332
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 287 (106.1 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 57/116 (49%), Positives = 82/116 (70%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
LD +NRIAAGEVI+ PA+ +KEL+ENS+DAK+T+I +T+++GG L+ + DNG GI+K
Sbjct: 6 LDPRTINRIAAGEVIECPASVVKELVENSIDAKATAISITIERGGRNLIIVSDNGIGIKK 65
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
EDM+I R TSKL DL + + GFRGE L SI+ V + +++K + S A+
Sbjct: 66 EDMEIAFARHATSKLPD-GDLTKVRSLGFRGEGLTSIAAVGKVKMVSKYRDSDTAW 120
Score = 252 (93.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 56/159 (35%), Positives = 91/159 (57%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T+I +T+++GG L+ + DNG GI+KEDM+I R TSKL DL + + GFRGE
Sbjct: 38 KATAISITIERGGRNLIIVSDNGIGIKKEDMEIAFARHATSKLPD-GDLTKVRSLGFRGE 96
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L SI+ V + +++K + S A+ + + + P A + GT I DLF+ P R
Sbjct: 97 GLTSIAAVGKVKMVSKYRDSDTAWLMVFEGGEKTQELTPDALSCGTYIEVRDLFFATPNR 156
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENL 470
K L+ E I D++++ A+ N +V F+L N+ +
Sbjct: 157 LKFLRTEKAEVQSIIDMMNKLAMVNHNVMFSLFVDNKQV 195
Score = 105 (42.0 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 211 QLKVTGWITNVNFSTKKMTFLL-FINN-PI--KRMIEQV---YSIYLPKGSFPFVYLSLC 263
Q++++G+I + S K + + F+N+ P+ +I V YS ++ K +P V L L
Sbjct: 231 QIQLSGYIGSPTLSRGKSSLIYTFVNSRPVYDNLLIGAVRYAYSDFIEKDKYPVVVLYLD 290
Query: 264 MDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL-LGSNT 305
+ VD NVHP K EV F + + V + +++ L + NT
Sbjct: 291 IPCDQVDANVHPNKSEVRFQDKKLVYRTVVNAIKEVLSINLNT 333
>UNIPROTKB|E7EUC9 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI01008784 ProteinModelPortal:E7EUC9 SMR:E7EUC9
Ensembl:ENST00000441265 ArrayExpress:E7EUC9 Bgee:E7EUC9
Uniprot:E7EUC9
Length = 105
Score = 323 (118.8 bits), Expect = 8.1e-29, P = 8.1e-29
Identities = 61/105 (58%), Positives = 82/105 (78%)
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 105
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 261 (96.9 bits), Expect = 9.5e-28, Sum P(3) = 9.5e-28
Identities = 53/109 (48%), Positives = 79/109 (72%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI L ++N+IAAGE++++PANA+KEL+EN++DA STSI+V +++ G L+++ DNG
Sbjct: 2 KIHILPIEIINKIAAGEILEKPANAVKELVENAIDAGSTSIKVELEEVGRNLIRVTDNGV 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 114
GI +ED+ + E+ TSKL +DL IS GFRGEAL SI+ + + I
Sbjct: 62 GISREDLPLAIEKHATSKLNT-KDLYDISYLGFRGEALHSIAITSEMKI 109
Score = 246 (91.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 63/185 (34%), Positives = 101/185 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
STSI+V +++ G L+++ DNG GI +ED+ + E+ TSKL +DL IS GFRGEA
Sbjct: 39 STSIKVELEEVGRNLIRVTDNGVGISREDLPLAIEKHATSKLNT-KDLYDISYLGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASY-IDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L SI+ I ++ K + C Y ID++ K+ +KP GT + LF+NIP +
Sbjct: 98 LHSIA------ITSEMKIASCFNGEGYVIDAQTKE-VKPHHIKCGTLVEVRKLFHNIPNK 150
Query: 432 RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSE---VIGNI 488
+ L+ E + I ++++R A+ NP++ F L + D +T E V+G
Sbjct: 151 LRFLRSEKTELSSIIELLNRLALVNPNIAFELISNGRQVFDYQTATQLKRMEQLKVLGKE 210
Query: 489 YGNNI 493
+ N+
Sbjct: 211 FVENM 215
Score = 120 (47.3 bits), Expect = 9.5e-28, Sum P(3) = 9.5e-28
Identities = 51/179 (28%), Positives = 85/179 (47%)
Query: 177 YQPSEKIVERACLLEIASLNNLE-LLSVEGTDDA-FQLKVTGWITNVNFSTKKMTFLLFI 234
YQ + ++ +R L++ +E ++ V+ T+D F G T + K+ L+F+
Sbjct: 192 YQTATQL-KRMEQLKVLGKEFVENMIHVKHTNDGIFGELFLGLPT---LTQKRNNCLIFV 247
Query: 235 NN-PIK-RMIEQV----YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTI 288
N P+K +I V Y+ Y+PK ++P + + + VDVN+HP K EV F I
Sbjct: 248 NGRPVKDSVISSVMRHAYNDYIPKNTYPIAVIFIRVHNNEVDVNIHPNKSEVKFRDPQVI 307
Query: 289 IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
+ S+ ++LL S T +T V+Q +LL+ Q T RKE + E
Sbjct: 308 RRFLLSVSSRSLLQCGRS----TSTTVADRAVEQFN-QLLKKQ---TAFRKETVSKTTE 358
Score = 42 (19.8 bits), Expect = 9.5e-28, Sum P(3) = 9.5e-28
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 422 EDLFYNIPTRRKALKQPSEEYNK 444
E F+ P +KA+ Q S+EY K
Sbjct: 358 ESGFFQSPKAKKAIDQ-SQEYAK 379
>UNIPROTKB|B7Z821 [details] [associations]
symbol:MLH1 "cDNA FLJ55289, highly similar to DNA mismatch
repair protein Mlh1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 UniGene:Hs.195364
HGNC:HGNC:7127 HOVERGEN:HBG006374 ChiTaRS:Mlh1 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 EMBL:AK302807
IPI:IPI01012620 SMR:B7Z821 STRING:B7Z821 Ensembl:ENST00000536378
Uniprot:B7Z821
Length = 460
Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/106 (57%), Positives = 83/106 (78%)
Query: 214 VTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPK 267
+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK + PF+YLSL + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS 313
NVDVNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ+
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQT 106
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 267 (99.0 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 53/111 (47%), Positives = 81/111 (72%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ LDET+ +IAAGEV++RPA+ +KELLEN++DA + I + V+ GGL+ +++QD+G G
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
I +++++ R TSKL +DL +I T GFRGEAL SI+ VA + I++
Sbjct: 63 IPADEIELAFARHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISR 113
Score = 256 (95.2 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 63/208 (30%), Positives = 110/208 (52%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ L + I + V+ GGL+ +++QD+G GI +++++
Sbjct: 19 VVERPASVVKELL-----ENAIDAGAQRIVIEVRGGGLREIRVQDDGCGIPADEIELAFA 73
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDP 407
R TSKL +DL +I T GFRGEAL SI+ VA + I++ + +++
Sbjct: 74 RHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELGVELRIAGGEVQSR 133
Query: 408 IKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN 467
+ PC GT I +LFYN P RR+ L+ + E I+ +V +YA+ P V F+L
Sbjct: 134 L-PCGCPVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALAYPEVSFSLLIDG 192
Query: 468 ENLADIRTNVNSSHSEVIGNIYGNNISR 495
+A ++T+ + V+ +YG + R
Sbjct: 193 R-MA-LQTSGDGDLRTVVVELYGLEVGR 218
Score = 113 (44.8 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 186 RACLLEIASLN-NLELLSVE---GTDDAFQLKVTGWITNVNFSTKKMTFL-LFINN---- 236
R ++E+ L LL V+ G D+ + + V G I+ + +L LF N
Sbjct: 205 RTVVVELYGLEVGRALLPVQAEAGVDETW-VAVNGLISPPELTRSSRNYLSLFANRRALQ 263
Query: 237 P---IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
P + ++E Y L KG FP L + + P +DVNVHPTK EV F
Sbjct: 264 PRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEVKF 312
>UNIPROTKB|C9JZ54 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
IPI:IPI00783078 ProteinModelPortal:C9JZ54 SMR:C9JZ54 STRING:C9JZ54
Ensembl:ENST00000429117 ArrayExpress:C9JZ54 Bgee:C9JZ54
Uniprot:C9JZ54
Length = 83
Score = 311 (114.5 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 62/79 (78%), Positives = 64/79 (81%)
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EALASISHVAH+TI TKT CAYRASY D KLK P KPCAGNQGTQI EDLFYNI T
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 431 RRKALKQPSEEYNKIADVV 449
RRKALK PSEEY KI +VV
Sbjct: 64 RRKALKNPSEEYGKILEVV 82
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 20/26 (76%), Positives = 21/26 (80%)
Query: 101 EALASISHVAHLTIITKTKTSPCAYR 126
EALASISHVAH+TI TKT CAYR
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYR 29
>UNIPROTKB|Q89DE6 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224911 "Bradyrhizobium japonicum USDA 110" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 EMBL:BA000040
GenomeReviews:BA000040_GR HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_774133.1 ProteinModelPortal:Q89DE6 GeneID:1054324
KEGG:bja:blr7493 PATRIC:21198969
BioCyc:BJAP224911:GJEJ-7548-MONOMER Uniprot:Q89DE6
Length = 603
Score = 270 (100.1 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+++L E VVNRIAAGEV++RPA+ +KEL+EN++DA ++ I V GG + + I D+G+G
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
+ +D+ + ER TSKL EDL I T GFRGEAL SI VA L+I T+ P A+
Sbjct: 63 MTAKDLALAVERHATSKLDD-EDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEPHAW 120
Score = 250 (93.1 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 63/151 (41%), Positives = 82/151 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
++ I V GG + + I D+G+G+ +D+ + ER TSKL EDL I T GFRGEA
Sbjct: 39 ASRIDVFTDGGGRRRIGITDDGSGMTAKDLALAVERHATSKLDD-EDLLQIRTLGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L SI VA L+I T+ P A+ A ++ K I P A GT++ DLFY P R
Sbjct: 98 LPSIGSVARLSITTRHAGEPHAW-ALTVEGGEKSEIMPAALAHGTRVEVNDLFYATPARL 156
Query: 433 KALKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
K LK E I +VV R A+ P V FTL
Sbjct: 157 KFLKTDRTEAEAIREVVRRLAMARPDVAFTL 187
Score = 107 (42.7 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 232 LFINN-PIK-RMI----EQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
LF+N P++ ++I YS YLP+ P + L + +DP+ VD NVHP K EV F
Sbjct: 254 LFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVLALFVTLDPREVDANVHPAKTEVRF 310
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 275 (101.9 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 67/213 (31%), Positives = 111/213 (52%)
Query: 288 IIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCE 347
++ER S++++ + ST I++ +++ GL +++ DNG G+ ED
Sbjct: 20 VVERPASVVKELV-----ENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCKRAFR 74
Query: 348 RFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT---SPCAYRASYIDSKL 404
R TSK+ DL + T GFRGEAL SI+ V+HL I T T + + I S+
Sbjct: 75 RHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTSTGEGAGTKLVLQGGNIISES 134
Query: 405 KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
+ + +GT+I+ +LF+N P R K +K E I DVV+R A+ +P V L+
Sbjct: 135 RS-----SSRKGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAHPEVSIRLR 189
Query: 465 KQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
+NL ++TN N V+ IYG +++++
Sbjct: 190 HHGKNL--LQTNGNGDVRHVLAAIYGTAVAKKM 220
Score = 267 (99.0 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 52/113 (46%), Positives = 77/113 (68%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
K+ +L + + N+IAAGEV++RPA+ +KEL+EN++DA ST I++ +++ GL +++ DNG
Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGE 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
G+ ED R TSK+ DL + T GFRGEAL SI+ V+HL I T T
Sbjct: 63 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST 115
Score = 109 (43.4 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 233 FINN-PIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIER 291
+I N P+ + + + Y LP G P ++ + MDP VDVNVHP+K EV E + +
Sbjct: 257 YIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDL 316
Query: 292 VQ 293
++
Sbjct: 317 IR 318
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 282 (104.3 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 55/120 (45%), Positives = 84/120 (70%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P+I++LDET +NRIAAGEV++RPA+A+KEL+EN++DA +T I + + GG L+++ D+G
Sbjct: 13 PEIRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSDDG 72
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
G+ + + + R TSK+ DL +I TFGFRGEAL S+ V LTI ++ + + A
Sbjct: 73 CGMTPDQLPLALARHATSKIDG-SDLLNIHTFGFRGEALPSLGSVGRLTITSRARGAEAA 131
Score = 255 (94.8 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 66/202 (32%), Positives = 105/202 (51%)
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQS--MLEK--TLLGSNTSRVFYTQSTSIQVTVKQG 323
+ D N+ P + E+ L E T I R+ + ++E+ + + +T I + + G
Sbjct: 3 STDPNIIPAQPEIRQLDE-TAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADG 61
Query: 324 GLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLT 383
G L+++ D+G G+ + + + R TSK+ DL +I TFGFRGEAL S+ V LT
Sbjct: 62 GKTLIRVSDDGCGMTPDQLPLALARHATSKIDG-SDLLNIHTFGFRGEALPSLGSVGRLT 120
Query: 384 IITKTKTSPCA-YRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEY 442
I ++ + + A R S ++ DP+KP A GT + DLF+ P R K ++ E
Sbjct: 121 ITSRARGAEAANIRVS--GGRV-DPVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEA 177
Query: 443 NKIADVVSRYAVHNPHVGFTLK 464
+AD V R A+ P V FTL+
Sbjct: 178 QAVADTVKRLAMAEPSVSFTLR 199
Score = 83 (34.3 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 232 LFINN-PIK-RMI----EQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
LF+N P++ +M+ Y +L + P L + DP VDVNVHP K EV F
Sbjct: 271 LFVNGRPVRDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPTLVDVNVHPAKSEVRF 327
>UNIPROTKB|Q8A120 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
RefSeq:NP_812762.1 ProteinModelPortal:Q8A120 GeneID:1072957
KEGG:bth:BT_3851 PATRIC:21062728 OMA:EEFGNNS ProtClustDB:CLSK823666
BioCyc:BTHE226186:GJXV-3925-MONOMER Uniprot:Q8A120
Length = 640
Score = 250 (93.1 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 53/114 (46%), Positives = 78/114 (68%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L ++V N+IAAGEVIQRPA+ +KEL+EN++DA + +I V V G +QI D+G G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT 120
+ + D + ER TSK+ + DL ++ T GFRGEALASI+ VA + + T+ ++
Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRLES 118
Score = 229 (85.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 56/183 (30%), Positives = 100/183 (54%)
Query: 315 SIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALA 374
+I V V G +QI D+G G+ + D + ER TSK+ + DL ++ T GFRGEALA
Sbjct: 43 NIHVLVTDAGKTCIQIIDDGKGMSETDARLSFERHATSKIREAADLFALRTMGFRGEALA 102
Query: 375 SISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA 434
SI+ VA + + T+ ++ + SK++ + + ++G+ ++LF+N+P RRK
Sbjct: 103 SIAAVAQVELKTRLESEELGTKLVIAGSKVESQ-EAVSCSKGSNFSVKNLFFNVPARRKF 161
Query: 435 LKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNIS 494
LK S E + I R A+ +P V F+L + L ++ V+ ++ I+G ++
Sbjct: 162 LKANSTELSNILAEFERIALVHPEVAFSLYSNDSELFNLP--VSPLRQRILA-IFGKKLN 218
Query: 495 RRV 497
+++
Sbjct: 219 QQL 221
Score = 118 (46.6 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 197 NLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF-LLFIN-----NP-IKRMIEQVYSIY 249
N +LL++E + +K++G+I + KK F+N +P + + + Y
Sbjct: 218 NQQLLNIEV--NTTMVKISGYIAKPETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQL 275
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
+P G ++ +DP N+DVN+HPTK E+ F +E I + + + ++++L
Sbjct: 276 IPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESL 326
>UNIPROTKB|Q3KLC2 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:315277 "Chlamydia trachomatis A/HAR-13" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000051 GenomeReviews:CP000051_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
ProtClustDB:PRK00095 RefSeq:YP_328398.1 ProteinModelPortal:Q3KLC2
STRING:Q3KLC2 GeneID:3687613 KEGG:cta:CTA_0625 PATRIC:32023166
OMA:RRGFQKS BioCyc:CTRA315277:GI4C-650-MONOMER Uniprot:Q3KLC2
Length = 576
Score = 250 (93.1 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 48/113 (42%), Positives = 76/113 (67%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P +I+ LD VN+I+AGEVI+ A+ +KEL+ENSLDA + I + GG + ++DN
Sbjct: 5 PSRIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDN 64
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
G G+ E++ + +R TSK+ F D+ S++++GFRGEAL SI+ ++ + I T
Sbjct: 65 GVGMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEIHT 117
Score = 191 (72.3 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 47/153 (30%), Positives = 79/153 (51%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
I + GG + ++DNG G+ E++ + +R TSK+ F D+ S++++GFRGEAL S
Sbjct: 47 IHIETLGGGRGQIVVRDNGVGMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPS 106
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLK----DPI--KPCAGNQGTQIIAEDLFYNIP 429
I+ ++ + I T RA + SK +P+ +P QGT I LFYN+P
Sbjct: 107 IASISKMEIHTA--------RAGGLGSKTLIEKGEPVCCEPAPRQQGTTIAVHSLFYNVP 158
Query: 430 TRRKALKQPSEEYNKIADVVSRYAVHNPHVGFT 462
R+ K P + I ++ + + +G+T
Sbjct: 159 MRQSFQKSPQMDRLAIRRLLENSVLSSEGIGWT 191
Score = 113 (44.8 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 212 LKVTGWITNVN-FSTKKMTFLLFINNP------IKRMIEQVYSIYLPKGSFPFVYLSLCM 264
L+V G++ + N + + LFINN I + + + Y+ +P +P L L +
Sbjct: 234 LRVLGFLGSPNQHRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLFL 293
Query: 265 DPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGG 324
P D NVHP K EV L E I + + + LL +S S++ TV +
Sbjct: 294 PPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALL---------RRSPSLEETVLKVP 344
Query: 325 LKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLT 383
+ + I++ G + IV + +Q L + ++T R A +S+S V +
Sbjct: 345 TEKIPIENEGISVPSIRPAIVSAPLSCPTFSQQPYLKTEMATIVSRDSASSSLSVVEKVR 404
Query: 384 IIT 386
+T
Sbjct: 405 FLT 407
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 250 (93.1 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 52/125 (41%), Positives = 83/125 (66%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK++D V+RI +G+V+ A+KEL+ENSLDA +T+I V +K G +L+++
Sbjct: 2 EPAKTIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVS 61
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG G+ +E+ + + + TSK+ F DL + TFGFRGEAL+S+ ++ +TI T K++
Sbjct: 62 DNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSA 121
Query: 122 PCAYR 126
R
Sbjct: 122 KVGTR 126
Score = 196 (74.1 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 44/126 (34%), Positives = 73/126 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I V +K G +L+++ DNG G+ +E+ + + + TSK+ F DL + TFGFRGEA
Sbjct: 43 ATNIDVRLKDHGAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEA 102
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T K++ R + D K K P QGT + + LF+ +P R
Sbjct: 103 LSSLCALSDVTISTCHKSAKVGTRLVF-DHNGKITQKAPYPRQQGTTVSIQQLFHTLPVR 161
Query: 432 RKALKQ 437
K ++
Sbjct: 162 HKEFQR 167
Score = 120 (47.3 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 35/127 (27%), Positives = 70/127 (55%)
Query: 199 ELLSVEGTDDAFQL-KVTGWITNVNFSTKKMTF---LLFIN----NPIK--RMIEQVYSI 248
E ++ TD +L +TG+I+ + + T FIN +P K +++ +VY +
Sbjct: 245 EEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL 304
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV--QSMLEKTLLGSNTS 306
Y K +PF+ L++C+D + VD+NV P K ++ L E+ ++ + S++E + GS+ +
Sbjct: 305 Y-NKHQYPFIVLNICVDSECVDINVTPDKRQI-LLQEEKLLLAILKTSLIE--MFGSDVN 360
Query: 307 RVFYTQS 313
++ Q+
Sbjct: 361 KLNVNQN 367
Score = 37 (18.1 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 471 ADI-RTNVNSSHSEVIGNI 488
+D+ + NVN + +++GN+
Sbjct: 357 SDVNKLNVNQNLLDIVGNV 375
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 250 (93.1 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 52/125 (41%), Positives = 83/125 (66%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK++D V+RI +G+V+ A+KEL+ENSLDA +T+I V +K G +L+++
Sbjct: 25 EPAKTIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVS 84
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
DNG G+ +E+ + + + TSK+ F DL + TFGFRGEAL+S+ ++ +TI T K++
Sbjct: 85 DNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSA 144
Query: 122 PCAYR 126
R
Sbjct: 145 KVGTR 149
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/183 (30%), Positives = 95/183 (51%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I V +K G +L+++ DNG G+ +E+ + + + TSK+ F DL + TFGFRGEA
Sbjct: 66 ATNIDVRLKDHGAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEA 125
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T K++ R + D K K P QGT + + LF+ +P R
Sbjct: 126 LSSLCALSDVTISTCHKSAKVGTRLVF-DHNGKITQKAPYPRQQGTTVSIQQLFHTLPVR 184
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY K+ ++ Y + + V Q + + T + E IG
Sbjct: 185 HKEFQRNIKKEYAKMVQILQAYCIISKGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGA 244
Query: 488 IYG 490
++G
Sbjct: 245 VFG 247
Score = 120 (47.3 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 35/127 (27%), Positives = 70/127 (55%)
Query: 199 ELLSVEGTDDAFQL-KVTGWITNVNFSTKKMTF---LLFIN----NPIK--RMIEQVYSI 248
E ++ TD +L +TG+I+ + + T FIN +P K +++ +VY +
Sbjct: 268 EEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL 327
Query: 249 YLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV--QSMLEKTLLGSNTS 306
Y K +PF+ L++C+D + VD+NV P K ++ L E+ ++ + S++E + GS+ +
Sbjct: 328 Y-NKHQYPFIVLNICVDSECVDINVTPDKRQI-LLQEEKLLLAILKTSLIE--MFGSDVN 383
Query: 307 RVFYTQS 313
++ Q+
Sbjct: 384 KLNVNQN 390
Score = 37 (18.1 bits), Expect = 3.2e-25, Sum P(3) = 3.2e-25
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 471 ADI-RTNVNSSHSEVIGNI 488
+D+ + NVN + +++GN+
Sbjct: 380 SDVNKLNVNQNLLDIVGNV 398
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 249 (92.7 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 48/113 (42%), Positives = 80/113 (70%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK + + ++ I + +VI +N +KEL+ENS+DA +T I+V + + G+K++++ DNG
Sbjct: 2 KIKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKIIEVSDNGN 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSI-STFGFRGEALASISHVAHLTIITK 117
GI+K + + VC R TSK+++F+D+++I T GFRGEAL S+ ++ L I TK
Sbjct: 62 GIKKINFENVCARHATSKISEFDDIHNILDTLGFRGEALNSLCMLSDLCISTK 114
Score = 235 (87.8 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 64/208 (30%), Positives = 113/208 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSI-STFGFRGE 371
+T I+V + + G+K++++ DNG GI+K + + VC R TSK+++F+D+++I T GFRGE
Sbjct: 39 ATEIKVKLVENGIKIIEVSDNGNGIKKINFENVCARHATSKISEFDDIHNILDTLGFRGE 98
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYID-SKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
AL S+ ++ L I TK Y + KL +P A +GT + E++F NIP
Sbjct: 99 ALNSLCMLSDLCISTKHDEFEHGYLLKFDKFGKLIHE-EPIARLRGTTVSCENIFKNIPI 157
Query: 431 RRKAL-KQPSEEYNKIADVVSRYAVHNPHVGF------TLKKQNENLADIRTNVNSSHSE 483
R+K L K + N + ++ +YA+ + F T K +N+ + TN + +
Sbjct: 158 RKKDLIKNIKSQLNDLLTLMQQYAIIYHEIKFMIFNVVTQKGCTKNMNMLITNGSDDIKK 217
Query: 484 VIGNIYGN-NISRRVRRFSSASQSALAR 510
+I+G NI + F+ +++ L +
Sbjct: 218 NFYSIFGKKNIGNLID-FNITNENWLVK 244
Score = 120 (47.3 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 214 VTGWITNVNFST--KKMTFLLFINNPI---KRMIEQVYSIYLPKGS--FPFVYLSLCMDP 266
V G+I++ N K + F N PI K + + + +IY S +P + ++ D
Sbjct: 243 VKGYISDSNSGRRDKDLQFYYMNNRPIHVIKNVNKIINTIYREFNSRLYPIIIFNILSDS 302
Query: 267 KNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
KN+D+NV P K EV F E+ + E +++ L K LL TS TQ
Sbjct: 303 KNIDINVTPDKREVFFTFENELCEEIKTELIK-LLTPKTSNFVDTQ 347
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 262 (97.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 69/221 (31%), Positives = 116/221 (52%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
VH + +I V S +++ + S S +T+I++ K G+ +++ DNG+GI
Sbjct: 12 VHKICSGQVITDVASAVKELVENSLDSG-----ATTIEIRFKNYGINSIEVVDNGSGIDA 66
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKT-SPCAYRAS 398
D + + ++ TSK+T FEDL ++ TFGFRGEAL+S+ V + I T T+ +P + +
Sbjct: 67 GDYESIGKKHFTSKITDFEDLEALQTFGFRGEALSSLCAVGQVIISTATQNEAPKGVQLN 126
Query: 399 YI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL-KQPSEEYNKIADVVSRYAVHN 456
+ LKD + +GT ++ DLF +P RRK L K E++K ++ YA +
Sbjct: 127 LDHEGSLKDKLT-IPFQRGTSVMVNDLFCTLPVRRKLLEKNYKREFSKAISLLQAYATIS 185
Query: 457 PHVGFTLKKQNEN---LADIRTNVNSSHSEVIGNIYGNNIS 494
+ F + Q +N L + TN N I N++G +S
Sbjct: 186 TNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVS 226
Score = 254 (94.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 49/113 (43%), Positives = 79/113 (69%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K +D V++I +G+VI A+A+KEL+ENSLD+ +T+I++ K G+ +++ DNG+G
Sbjct: 4 VKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGSG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
I D + + ++ TSK+T FEDL ++ TFGFRGEAL+S+ V + I T T+
Sbjct: 64 IDAGDYESIGKKHFTSKITDFEDLEALQTFGFRGEALSSLCAVGQVIISTATQ 116
Score = 108 (43.1 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 64/277 (23%), Positives = 118/277 (42%)
Query: 226 KKMTFL--LFINNP-IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHF 282
++M F+ +N P I R+I++V+ Y S PF ++L + +D+NV P K V
Sbjct: 255 RQMLFINRRLVNLPKIARVIQEVFKPYSMAQS-PFFAINLRITNGTIDINVSPDKKSVFL 313
Query: 283 LHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSI-----QVTVKQGGLKLLQIQDNGTGI 337
ED+IIE +++ L+ L S + ++S SI Q+ G ++ +
Sbjct: 314 SEEDSIIEFIKNSLQN-LCESCGHAISCSRSQSIFSYSSQIPDSSGDSTDQELPQSIPAT 372
Query: 338 RKEDMDIVCERFTTS----KLTQFEDLNSISTFGFRGEALASISHVA--HLTIITKTKTS 391
E D + S KL + +IST G +LA +S L + ++S
Sbjct: 373 ESETSDDSSFSYKRSPCKRKLVEATAQPAISTSVAEGASLAQVSKPLPERLQKDSMRRSS 432
Query: 392 PCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSR 451
P + + ++K + A + T + + + + P LKQP NK + +
Sbjct: 433 PLNEKVTASSERMKKKLALFASSTDTSM-QKTIDSSFP-----LKQP---INKPSSNPNN 483
Query: 452 YAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNI 488
+++P T + NL +I + N+ + +I
Sbjct: 484 LLLNDPSPASTPVAKTINLNEIESVHNAESVSTLSSI 520
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 249 (92.7 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 47/121 (38%), Positives = 83/121 (68%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK + E ++ I + +VI ++ +KEL+ENS+DA ++ I++ + + G+KL+++ DNG
Sbjct: 2 KIKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGV 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI+K + + +C R TSK+ F D++S ++T GFRGEAL S+ ++++ I TK + + A
Sbjct: 62 GIKKINFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHA 121
Query: 125 Y 125
Y
Sbjct: 122 Y 122
Score = 237 (88.5 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 63/230 (27%), Positives = 123/230 (53%)
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTG 336
+ +H + +I + S++ K L+ ++ ++ I++ + + G+KL+++ DNG G
Sbjct: 8 EESIHNICSSQVIFTLSSVV-KELVENSID----ADASEIKIKLVESGIKLIEVNDNGVG 62
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTKTSPCAY 395
I+K + + +C R TSK+ F D++S ++T GFRGEAL S+ ++++ I TK + + AY
Sbjct: 63 IKKINFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHAY 122
Query: 396 RASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA-LKQPSEEYNKIADVVSRYAV 454
+ +P A +GT + E++F+NIP R+K +K + + + ++ +YA+
Sbjct: 123 LLKFDKLGRLYHEEPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAI 182
Query: 455 HNPHVGF------TLKKQNENLADIRTNVNSSHSEVIGNIYGN-NISRRV 497
++ F T K +N+ + TN S + +IYG NI +
Sbjct: 183 IYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLI 232
Score = 116 (45.9 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 203 VEGTDDAFQLKVTGWITNVNFST--KKMTFLLFINNPI---KRMIEQVYSIYLPKGS--F 255
+E D + + G+I++ N K + F + PI K + + + +IY S +
Sbjct: 232 IEFNIDGNEWNIRGYISDSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSRLY 291
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P + ++ D KN+D+NV P K EV F E + E +++ L K L TS + TQ
Sbjct: 292 PIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTALVK-LFTPKTSNLIDTQ 347
Score = 46 (21.3 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 420 IAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNS 479
I E+ YN P K ++ E Y +S Y + T K N N+ +NS
Sbjct: 479 IKEEKIYNYPN--KYIEN-DELYRDNTSSLS-YTLSQKDYIPTENKMNNNIQIKNDELNS 534
Query: 480 SHSEVIGNIYG-NNISRRVRRFSSASQS 506
S S + Y +NI R F+S +S
Sbjct: 535 S-SLFQNDDYNFSNIYRANHSFTSTQES 561
Score = 38 (18.4 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 436 KQPSEEYNKIADVVSRYAVHNPHV 459
K E+YNKI + S+ + HV
Sbjct: 1076 KSNFEKYNKIFTMKSQKLISKIHV 1099
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 249 (92.7 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 47/121 (38%), Positives = 83/121 (68%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KIK + E ++ I + +VI ++ +KEL+ENS+DA ++ I++ + + G+KL+++ DNG
Sbjct: 2 KIKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGV 61
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI+K + + +C R TSK+ F D++S ++T GFRGEAL S+ ++++ I TK + + A
Sbjct: 62 GIKKINFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHA 121
Query: 125 Y 125
Y
Sbjct: 122 Y 122
Score = 237 (88.5 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 63/230 (27%), Positives = 123/230 (53%)
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTG 336
+ +H + +I + S++ K L+ ++ ++ I++ + + G+KL+++ DNG G
Sbjct: 8 EESIHNICSSQVIFTLSSVV-KELVENSID----ADASEIKIKLVESGIKLIEVNDNGVG 62
Query: 337 IRKEDMDIVCERFTTSKLTQFEDLNS-ISTFGFRGEALASISHVAHLTIITKTKTSPCAY 395
I+K + + +C R TSK+ F D++S ++T GFRGEAL S+ ++++ I TK + + AY
Sbjct: 63 IKKINFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDHAY 122
Query: 396 RASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA-LKQPSEEYNKIADVVSRYAV 454
+ +P A +GT + E++F+NIP R+K +K + + + ++ +YA+
Sbjct: 123 LLKFDKLGRLYHEEPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAI 182
Query: 455 HNPHVGF------TLKKQNENLADIRTNVNSSHSEVIGNIYGN-NISRRV 497
++ F T K +N+ + TN S + +IYG NI +
Sbjct: 183 IYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLI 232
Score = 116 (45.9 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 203 VEGTDDAFQLKVTGWITNVNFST--KKMTFLLFINNPI---KRMIEQVYSIYLPKGS--F 255
+E D + + G+I++ N K + F + PI K + + + +IY S +
Sbjct: 232 IEFNIDGNEWNIRGYISDSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSRLY 291
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 312
P + ++ D KN+D+NV P K EV F E + E +++ L K L TS + TQ
Sbjct: 292 PIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTALVK-LFTPKTSNLIDTQ 347
Score = 46 (21.3 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 420 IAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNS 479
I E+ YN P K ++ E Y +S Y + T K N N+ +NS
Sbjct: 479 IKEEKIYNYPN--KYIEN-DELYRDNTSSLS-YTLSQKDYIPTENKMNNNIQIKNDELNS 534
Query: 480 SHSEVIGNIYG-NNISRRVRRFSSASQS 506
S S + Y +NI R F+S +S
Sbjct: 535 S-SLFQNDDYNFSNIYRANHSFTSTQES 561
Score = 38 (18.4 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 436 KQPSEEYNKIADVVSRYAVHNPHV 459
K E+YNKI + S+ + HV
Sbjct: 1076 KSNFEKYNKIFTMKSQKLISKIHV 1099
>UNIPROTKB|O67518 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224324 "Aquifex aeolicus VF5" [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300 PIR:D70436
RefSeq:NP_214083.1 ProteinModelPortal:O67518 GeneID:1193141
KEGG:aae:aq_1578 PATRIC:20960208 HOGENOM:HOG000256552 OMA:MVLFIND
ProtClustDB:CLSK2748471 BioCyc:AAEO224324:GJBH-1125-MONOMER
Uniprot:O67518
Length = 425
Score = 262 (97.3 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 54/104 (51%), Positives = 77/104 (74%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K L V IAAGEVI+ P + +KEL+ENSLDAK+T ++V + +GG +L++++DNGTG
Sbjct: 3 VKLLPPEVRKVIAAGEVIESPVDVVKELVENSLDAKATKVEVEIVKGGKRLIRVKDNGTG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA 110
I ED++ V + TSK+ +DL +IST+GFRGEAL SIS V+
Sbjct: 63 IHPEDVEKVVLQGATSKIETEKDLMNISTYGFRGEALYSISSVS 106
Score = 259 (96.2 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 70/209 (33%), Positives = 111/209 (53%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T ++V + +GG +L++++DNGTGI ED++ V + TSK+ +DL +IST+GFRGE
Sbjct: 38 KATKVEVEIVKGGKRLIRVKDNGTGIHPEDVEKVVLQGATSKIETEKDLMNISTYGFRGE 97
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGN----------QGTQIIA 421
AL SIS V+ + R+ + K I+ AGN GT++
Sbjct: 98 ALYSISSVSKFKL-----------RSRFFQEKEGKEIEVEAGNILGTRRVGMPVGTEVEV 146
Query: 422 EDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQN-ENLADIRTNVNSS 480
DLF+N+P RRK LK+ E K+ +++ YA+ NP V FTL + E L ++++
Sbjct: 147 RDLFFNLPVRRKFLKKEDTERRKVLELIKEYALTNPEVEFTLFSEGRETLKLKKSSLKER 206
Query: 481 HSEVIGN----IYGNNISRRVRRFSSASQ 505
EV +Y +R F S +Q
Sbjct: 207 VEEVFQTKTEELYAEREGITLRAFVSRNQ 235
Score = 79 (32.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 221 VNFSTKKMTFLLFINN-PI--KRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
V+ + ++ + +FIN PI K + E + ++ G V L + P VD NVHP K
Sbjct: 231 VSRNQRQGKYYVFINKRPIQNKNLKEFLRKVF---GYKTLVVLYAELPPFMVDFNVHPKK 287
Query: 278 HEVHFLHEDTIIERVQSML--EKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGT 335
EV+ L E +E V+ + EK ++ S+ T + ++ + +L ++D+
Sbjct: 288 KEVNILKERKFLELVRELAGKEKPIVDIPLSQPVKTYKPTYEILGQMDETFIL-VKDSEY 346
Query: 336 GIRKEDMDIVCERFTTSKL 354
+ D ++ ER KL
Sbjct: 347 -LYFVDQHLLEERINYEKL 364
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 283 (104.7 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 58/121 (47%), Positives = 86/121 (71%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKLD++ + I +VI A +KEL+ENSLDA ST I+V +K+ G + +++ DNG+G
Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I ++++ + ++ TSKL QF+DL S+ TFGFRGEAL +IS ++ LTI TKT + AYR
Sbjct: 62 ISSQNLEQIAQKGATSKLRQFQDLESLDTFGFRGEALNAISVLSQLTITTKTDSDEMAYR 121
Query: 127 W 127
+
Sbjct: 122 Y 122
Score = 270 (100.1 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 59/145 (40%), Positives = 94/145 (64%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I+V +K+ G + +++ DNG+GI ++++ + ++ TSKL QF+DL S+ TFGFRGEA
Sbjct: 38 STKIEVYLKEYGKEGVEVVDNGSGISSQNLEQIAQKGATSKLRQFQDLESLDTFGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI-DSKLKDP-IKPCAGNQGTQIIAEDLFYNIPT 430
L +IS ++ LTI TKT + AYR + D+ +K + P +GT I DLF NIP
Sbjct: 98 LNAISVLSQLTITTKTDSDEMAYRYQFNQDNTIKSKTLVP--RERGTTISLTDLFGNIPV 155
Query: 431 RRKAL-KQPSEEYNKIADVVSRYAV 454
R++ K +YNK+ ++++ YA+
Sbjct: 156 RKQEFNKNIISQYNKLVNMITEYAI 180
Score = 68 (29.0 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 213 KVTGWITNVNFSTKKMTFLLFIN----NPIKRMIEQVYS-IYLP-KGSFPFVY-LSLCMD 265
+ +G + + K M++L F+N NP K+M ++S IY S ++Y L L +
Sbjct: 249 QTSGSVQDSKSIQKNMSYL-FVNTRPVNPFKKM-NSIFSDIYKKYNSSARYIYILHLKVK 306
Query: 266 PKNVDVNVHPTKHEVHFLHED 286
+D NV P K ++ +E+
Sbjct: 307 KDAIDFNVSPDKRDIFIKYEN 327
Score = 42 (19.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 212 LKVTGWITNVNFSTKK-MTFLLFINNPIKRMIEQVYSIYLPK 252
+ V I +N S+KK +L +P+K M+++ ++ K
Sbjct: 181 ISVNCQICLINQSSKKGREMILNSGSPMKNMLQKTAQVFSKK 222
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 254 (94.5 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 53/121 (43%), Positives = 82/121 (67%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI +++ V+RI +G+VI A+KE++ENSLDA + +++T + GL+ ++ DNG
Sbjct: 4 KINAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNGD 63
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D + + TSK+ +FEDL ++TFGFRGEALASI +A LT+IT T+ P A+
Sbjct: 64 GIPDSNFDSLALKHHTSKIEEFEDLTRVTTFGFRGEALASICAMASLTVIT-TQKGPKAH 122
Query: 126 R 126
+
Sbjct: 123 K 123
Score = 232 (86.7 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 61/184 (33%), Positives = 99/184 (53%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALAS 375
+++T + GL+ ++ DNG GI + D + + TSK+ +FEDL ++TFGFRGEALAS
Sbjct: 44 LEITFRNYGLEAIECADNGDGIPDSNFDSLALKHHTSKIEEFEDLTRVTTFGFRGEALAS 103
Query: 376 ISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAG-NQGTQIIAEDLFYNIPTRRKA 434
I +A LT+IT T+ P A++ Y DS + K N+GT + LF N+P R+K
Sbjct: 104 ICAMASLTVIT-TQKGPKAHKLEY-DSHGRLVKKTVTSRNKGTTVQLRHLFNNMPVRKKE 161
Query: 435 -LKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNI 493
++ +++ K ++ YA L +N L+ N S S ++ N+I
Sbjct: 162 FVRNFKKQFGKCVTLLQSYA---------LLSENCRLSIFNVNAAGSKSLLLSTPGRNDI 212
Query: 494 SRRV 497
S+ +
Sbjct: 213 SKNI 216
Score = 96 (38.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 57/237 (24%), Positives = 94/237 (39%)
Query: 198 LELLSVEGT-DDA-FQLKVTGWITNVNF----STKKMTFLLFINNPIK--RMIEQVYSIY 249
L+ S + T DDA ++ VTG+I+ +F S K F+ P+ ++++ IY
Sbjct: 245 LKKYSEDSTLDDADHRIAVTGYISRASFGCGRSGKDRQFIYINKRPVDYPQVLKCCNDIY 304
Query: 250 LPKGS--FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSR 307
+ +P + L+ + P+ VDVNV P K V LH + + +QS+ EK N
Sbjct: 305 RSFNNVQYPVIILNFELSPQFVDVNVTPDKRTV-LLHNEEYV--LQSLAEKLDGHFNEQE 361
Query: 308 VFYTQST-SIQVTVKQGGLKL----LQIQDNGTGIRKEDM---DIVCERFTTSKLTQFED 359
+ +S S+ V + LK+ L G ++D C T E+
Sbjct: 362 LMLPKSLPSLPVPHQDSELKVKRRKLVPSQELIGTFEDDHLHNTTTCSEITACSQPMEEE 421
Query: 360 LNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQG 416
+ I E S + V ++ T+ P + P KP A G
Sbjct: 422 SSVIVAIDDIDECDTSSAQVLDPSVEPPTEIEPATPAEILPQPDVPVPAKPAAKTTG 478
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 243 (90.6 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/115 (41%), Positives = 80/115 (69%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK +D V++I +G+V+ + A+KEL+ENSLDA +T+I + +K G+ L+++
Sbjct: 10 EPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVS 69
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 70 DNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTIST 124
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 53/183 (28%), Positives = 97/183 (53%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 51 ATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R + D K K P +GT + + LF +P R
Sbjct: 111 LSSLCALSDVTISTCHASAKVGTRLMF-DHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVR 169
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY K+ V+ Y + + + + Q + + T + S E IG+
Sbjct: 170 HKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGS 229
Query: 488 IYG 490
++G
Sbjct: 230 VFG 232
Score = 107 (42.7 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 50/184 (27%), Positives = 91/184 (49%)
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKK 227
+L+P + Q PS+ + E L +L+NL +S F + T + ST +
Sbjct: 238 SLIPFV--QLPPSDSVCEEYGLSCSDALHNLFYIS------GFISQCTHGVGRS--STDR 287
Query: 228 MTFLLFIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
F FIN +P K R++ +VY +Y + +PFV L++ +D + VD+NV P K ++
Sbjct: 288 QFF--FINRRPCDPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQI- 343
Query: 282 FLHEDTIIERVQSMLEKTLLG---SNTSRVFYTQSTSIQVTVKQGGLKLLQIQD-NGTGI 337
L E+ ++ V L+ +L+G S+ +++ +Q + V +G L + D +
Sbjct: 344 LLQEEKLLLAV---LKTSLIGMFDSDVNKLNVSQQPLLDV---EGNLIKMHAADLEKPMV 397
Query: 338 RKED 341
K+D
Sbjct: 398 EKQD 401
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 239 (89.2 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 46/110 (41%), Positives = 77/110 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +TSI + +K G+ L+++ DNG G
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 75 VEEENFEGLALKHHTSKIREFADLTQVETFGFRGEALSSLCALSDVTIST 124
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 56/183 (30%), Positives = 101/183 (55%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 51 ATSIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIREFADLTQVETFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R +D K K PC +GT + ++LFY +P R
Sbjct: 111 LSSLCALSDVTISTCHVSASIGTRL-VLDHNGKIIQKTPCPRPKGTTVSVQNLFYTLPVR 169
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY K+ V+ Y + + + + Q + + T+ +S E IG+
Sbjct: 170 HKEFQRNIKKEYAKMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGS 229
Query: 488 IYG 490
++G
Sbjct: 230 VFG 232
Score = 106 (42.4 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 43/199 (21%), Positives = 92/199 (46%)
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKK 227
+LVP + Q PS+ + E CL + + +V + + ++ V G + + +
Sbjct: 238 SLVPFV--QLPPSDSVCEEYCLSACGTPQS-PFRTVRASFHSARM-VPGGVQQTDSFSSS 293
Query: 228 MTFLLFINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDT 287
++ L+ + + VY +Y + +PFV L++ +D + VD+NV P K ++ L E+
Sbjct: 294 ISGLVTQRRKVSFSL-MVYHMY-NRHQYPFVVLNVSVDSECVDINVTPDKRQI-LLQEEK 350
Query: 288 IIERVQSMLEKTLLG---SNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 344
++ V L+ +L+G S+ +++ Q + V +G L L + G + I
Sbjct: 351 LLLAV---LKTSLMGMFDSDANKLSVNQQPLLNV---EGNLVKLHTAEVGEQENSPSLRI 404
Query: 345 VCERFTTSKLTQFEDLNSI 363
E + +++ + S+
Sbjct: 405 TAEEKRVASVSRLREAYSL 423
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 240 (89.5 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 46/110 (41%), Positives = 78/110 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +TSI + +K G++L+++ DNG G
Sbjct: 8 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 67
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 68 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTIST 117
Score = 222 (83.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 56/183 (30%), Positives = 99/183 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI + +K G++L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 44 ATSIDLRLKDYGVELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEA 103
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T + R + D K K P +GT + + LFY +P R
Sbjct: 104 LSSLCALSDVTISTCHTSVKVGTRLVF-DHNGKILQKTPYPRPRGTTVSVQQLFYTLPVR 162
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +E+ K+ V+ Y + + V + Q + + T+ +SS E IG
Sbjct: 163 HKEFQRNIKKEFAKMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGL 222
Query: 488 IYG 490
++G
Sbjct: 223 VFG 225
Score = 101 (40.6 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKK 227
+L+P + Q PS+ I E L +L+NL +S F V+ V S+
Sbjct: 231 SLIPFV--QLPPSDSICEEYGLSCSQALHNLFCIS------GF---VSHCAHGVGRSSTD 279
Query: 228 MTFLLFIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
F FIN +P K R++ +VY +Y + +PFV L++ +D VD+NV P K ++
Sbjct: 280 RQFF-FINRRPCDPSKVSRLVNEVYHMY-NRHQYPFVVLNVSVDSACVDINVTPDKRQI- 336
Query: 282 FLHEDTIIERVQSMLEKTLLGSNTSRV 308
L E+ ++ V L+ +L+G S V
Sbjct: 337 LLQEEKLLLAV---LKTSLIGMFESDV 360
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 264 (98.0 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 63/192 (32%), Positives = 105/192 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I + VK G + +++QDNG+GI + D +C+ +TSKLTQF D + ++T GFRGEA
Sbjct: 42 STIIDIRVKNNGFESIEVQDNGSGIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L ++ V+ ++I T+ + R +Y S + A GT II LF +P RR
Sbjct: 102 LNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRR 161
Query: 433 KALKQPSE-EYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV------NSSHSEVI 485
K L++ + E+ K+ V +A+ PH+ N+ +TN+ +S +V+
Sbjct: 162 KELERSQKREFVKLLSTVQSFALLCPHIKILC---TNNINGKKTNLICTPGGTTSIQDVV 218
Query: 486 GNIYGNNISRRV 497
N++G I+R++
Sbjct: 219 ANLFG--IARKI 228
Score = 253 (94.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 47/125 (37%), Positives = 82/125 (65%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+++ + V R+ +V+ ++A+++L++NS+DA ST I + VK G + +++QDNG+
Sbjct: 5 KIERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGS 64
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D +C+ +TSKLTQF D + ++T GFRGEAL ++ V+ ++I T+ +
Sbjct: 65 GIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGT 124
Query: 126 RWCTY 130
R TY
Sbjct: 125 R-LTY 128
Score = 87 (35.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 210 FQL-KVTGWITNVNFSTKKMTF---LLFINN-PIK--RMIEQVYSIY--LPKGSFPFVYL 260
F L K+ G++++ + T ++INN P++ R+ + +Y K +P + L
Sbjct: 263 FDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVL 322
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+ + P+ +DVNV P K V E ++ V++ + KT L
Sbjct: 323 FIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYL 363
Score = 43 (20.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 463 LKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALA 509
L+K+ LA +R ++ ++ +++G+ S RR + SQ + +
Sbjct: 344 LEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFS 390
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 264 (98.0 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 63/192 (32%), Positives = 105/192 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
ST I + VK G + +++QDNG+GI + D +C+ +TSKLTQF D + ++T GFRGEA
Sbjct: 42 STIIDIRVKNNGFESIEVQDNGSGIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEA 101
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L ++ V+ ++I T+ + R +Y S + A GT II LF +P RR
Sbjct: 102 LNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRR 161
Query: 433 KALKQPSE-EYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNV------NSSHSEVI 485
K L++ + E+ K+ V +A+ PH+ N+ +TN+ +S +V+
Sbjct: 162 KELERSQKREFVKLLSTVQSFALLCPHIKILC---TNNINGKKTNLICTPGGTTSIQDVV 218
Query: 486 GNIYGNNISRRV 497
N++G I+R++
Sbjct: 219 ANLFG--IARKI 228
Score = 253 (94.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 47/125 (37%), Positives = 82/125 (65%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
KI+++ + V R+ +V+ ++A+++L++NS+DA ST I + VK G + +++QDNG+
Sbjct: 5 KIERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGS 64
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAY 125
GI + D +C+ +TSKLTQF D + ++T GFRGEAL ++ V+ ++I T+ +
Sbjct: 65 GIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGT 124
Query: 126 RWCTY 130
R TY
Sbjct: 125 R-LTY 128
Score = 87 (35.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 210 FQL-KVTGWITNVNFSTKKMTF---LLFINN-PIK--RMIEQVYSIY--LPKGSFPFVYL 260
F L K+ G++++ + T ++INN P++ R+ + +Y K +P + L
Sbjct: 263 FDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVL 322
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+ + P+ +DVNV P K V E ++ V++ + KT L
Sbjct: 323 FIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYL 363
Score = 43 (20.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 463 LKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALA 509
L+K+ LA +R ++ ++ +++G+ S RR + SQ + +
Sbjct: 344 LEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFS 390
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 222 (83.2 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 47/108 (43%), Positives = 70/108 (64%)
Query: 10 LDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRK 69
L +N+IAAGEVI PA+ +KEL+ENS+DA + +I V V +GG L+ + D+G GI
Sbjct: 6 LSAQTINKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGGRNLISVSDDGCGIAC 65
Query: 70 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
E+M+ TSKL DL ++ T GFRGE L +++ VA + +++K
Sbjct: 66 EEMEKAFIGHATSKLID-GDLANVKTMGFRGEGLTAVASVARVKMVSK 112
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 48/149 (32%), Positives = 80/149 (53%)
Query: 315 SIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALA 374
+I V V +GG L+ + D+G GI E+M+ TSKL DL ++ T GFRGE L
Sbjct: 41 TINVHVDKGGRNLISVSDDGCGIACEEMEKAFIGHATSKLID-GDLANVKTMGFRGEGLT 99
Query: 375 SISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKA 434
+++ VA + +++K + A+ ++ + + P + GT + DLF+ PTR K
Sbjct: 100 AVASVARVKMVSKHVDAERAWSITFEGGEKTRDLTPGVLSCGTHVEVRDLFFATPTRLKF 159
Query: 435 LKQPSEEYNKIADVVSRYAVHNPHVGFTL 463
L+ E I D+++R A+ N + F+L
Sbjct: 160 LRTEKAEMQNIVDLLNRLAMINYTIAFSL 188
Score = 116 (45.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLEL-LSVEGTDDAFQLKVTGWITNVNFSTK 226
T+V +Y E ++ER L E+ + + S+E ++V G I F+
Sbjct: 189 TIVERQIFKYSAQESLIER--LKEMRAFGEVFCEQSLEINHSIDHVRVYGHIGLPTFNKS 246
Query: 227 KMTFL-LFINN-PIKR--MIEQVYSIY---LPKGSFPFVYLSLCMDPKNVDVNVHPTKHE 279
K + F+N PI ++ V S Y +PK P V L+L + P VDVNVHP+K E
Sbjct: 247 KPGMVHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVNVHPSKME 306
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS 315
V F + + + V L + L SN F +T+
Sbjct: 307 VRFQDKRLVYKAVLDALGEAL-SSNVYARFSPAATT 341
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 237 (88.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 45/110 (40%), Positives = 77/110 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +T+I + +K G+ L+++ DNG G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMDLIEVSDNGCG 74
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTIST 124
Score = 224 (83.9 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 53/183 (28%), Positives = 99/183 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 51 ATNIDLRLKDYGMDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R + + K+ P +GT + + LFY +P R
Sbjct: 111 LSSLCALSDVTISTCHASAKVGTRLVFDHNGKILQK-SPYPRPRGTTVSVQQLFYTLPVR 169
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +E+ K+ V+ Y + + V T Q + + T+ +S E IG+
Sbjct: 170 HKEFQRNIKKEFAKMVQVLHAYCIISSGVRVTCTNQVGQGKRQPVVSTSGGASIKENIGS 229
Query: 488 IYG 490
++G
Sbjct: 230 VFG 232
Score = 101 (40.6 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 176 QYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFIN 235
Q PS+ + E L +L+NL +S F + T + ST + F FIN
Sbjct: 244 QLPPSDSVCEEFGLSCSDALHNLFCIS------GFISRCTHGVGRS--STDRQFF--FIN 293
Query: 236 ----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTII 289
+P K R++ +VY +Y + +PFV L++ +D + VD+NV P K ++ L E+ ++
Sbjct: 294 RRPCDPAKVSRLVNEVYHLY-NRHQYPFVVLNISVDSECVDINVTPDKRQI-LLQEEKLL 351
Query: 290 ERVQSMLEKTLLGSNTSRVFYTQSTSIQV 318
V + ++ +++ Q + + V
Sbjct: 352 LAVLKTSLIDMFDNDVNKISVRQQSLLDV 380
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 329 QIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTF 366
Q+Q + ++ D VCE F S +L IS F
Sbjct: 235 QLQSLISFVQLPPSDSVCEEFGLSCSDALHNLFCISGF 272
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 232 (86.7 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 44/110 (40%), Positives = 76/110 (69%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +T+I + +K G+ +++ DNG G
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 74
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+++E+ + + + TSK+ F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 75 VKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTIST 124
Score = 223 (83.6 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 54/183 (29%), Positives = 99/183 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ +++ DNG G+++E+ + + + TSK+ F DL + TFGFRGEA
Sbjct: 51 ATNIDLKLKDYGVDFIEVSDNGCGVKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R ++ D K K P +GT + + LFY +P R
Sbjct: 111 LSSLCALSDVTISTCHTSAKVGTRLAF-DHNGKIVQKTPHPRPRGTTVSVQQLFYTLPVR 169
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY K+ V+ Y + + + + Q + T+ +SS E IG+
Sbjct: 170 HKEFQRNIKKEYAKMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGS 229
Query: 488 IYG 490
++G
Sbjct: 230 VFG 232
Score = 102 (41.0 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 224 STKKMTFLLFIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
ST + F FIN +P K R++ +VY +Y + +PF+ L++ +D + +D+NV P K
Sbjct: 284 STDRQFF--FINRRPCDPAKVSRLVNEVYHMY-NRHQYPFIVLNISVDSECIDINVTPDK 340
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQV 318
++ L E+ ++ V + SN +++ +Q + +
Sbjct: 341 RQI-LLQEEKLLLAVLKTSLIAMFDSNVNKLTVSQQPLLDI 380
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 232 (86.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 44/110 (40%), Positives = 76/110 (69%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +T+I + +K G+ +++ DNG G
Sbjct: 46 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 105
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+++E+ + + + TSK+ F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 106 VKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTIST 155
Score = 223 (83.6 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/183 (29%), Positives = 99/183 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ +++ DNG G+++E+ + + + TSK+ F DL + TFGFRGEA
Sbjct: 82 ATNIDLKLKDYGVDFIEVSDNGCGVKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEA 141
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R ++ D K K P +GT + + LFY +P R
Sbjct: 142 LSSLCALSDVTISTCHTSAKVGTRLAF-DHNGKIVQKTPHPRPRGTTVSVQQLFYTLPVR 200
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY K+ V+ Y + + + + Q + T+ +SS E IG+
Sbjct: 201 HKEFQRNIKKEYAKMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGS 260
Query: 488 IYG 490
++G
Sbjct: 261 VFG 263
Score = 102 (41.0 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 224 STKKMTFLLFIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTK 277
ST + F FIN +P K R++ +VY +Y + +PF+ L++ +D + +D+NV P K
Sbjct: 315 STDRQFF--FINRRPCDPAKVSRLVNEVYHMY-NRHQYPFIVLNISVDSECIDINVTPDK 371
Query: 278 HEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQV 318
++ L E+ ++ V + SN +++ +Q + +
Sbjct: 372 RQI-LLQEEKLLLAVLKTSLIAMFDSNVNKLTVSQQPLLDI 411
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 246 (91.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 45/110 (40%), Positives = 80/110 (72%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D+ V++I +G+V+ A A+KEL+ENS+DA +T++ V +K G++L+++ DNG G
Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKG 71
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ +++ + + + TSKL +F DL + TFGFRGEAL+S+ ++ L+++T
Sbjct: 72 VEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVT 121
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 53/183 (28%), Positives = 102/183 (55%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++ V +K G++L+++ DNG G+ +++ + + + TSKL +F DL + TFGFRGEA
Sbjct: 48 ATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEA 107
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ L+++T +++ R Y D +L + P GT + + LF +P R
Sbjct: 108 LSSLCALSDLSVVTCHESAQIGARLVYDHDGRLTQCV-PHPRQHGTTVTLQKLFSTLPVR 166
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY+K+ V+ Y + + V T Q + + T+ ++S + IG
Sbjct: 167 HKEFQRNIKKEYSKMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGA 226
Query: 488 IYG 490
++G
Sbjct: 227 VFG 229
Score = 86 (35.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 233 FIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHED 286
FIN +P+K +++ +VY +Y + +PFV L++ + VDVNV P K ++ E
Sbjct: 288 FINKRPCDPVKVSKLVNEVYHMY-NRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEK 346
Query: 287 TIIERVQSML 296
++ ++S L
Sbjct: 347 LLLAILKSSL 356
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 257 (95.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 52/122 (42%), Positives = 82/122 (67%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ + ++ V+RI +G+VI ++A+KEL+ENSLDA +T+++VT++ G + DNG
Sbjct: 7 PAIRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVADNG 66
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
TGI + + + TSK++ F DL S++TFGFRGEAL+S+ + LT+ T+TK P
Sbjct: 67 TGISPTNFQALALKHHTSKISDFGDLASVATFGFRGEALSSLCALGKLTVETRTKDEPVG 126
Query: 125 YR 126
R
Sbjct: 127 TR 128
Score = 245 (91.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 60/193 (31%), Positives = 101/193 (52%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+++VT++ G + DNGTGI + + + TSK++ F DL S++TFGFRGEA
Sbjct: 45 ATTVEVTLRSYGEDSFTVADNGTGISPTNFQALALKHHTSKISDFGDLASVATFGFRGEA 104
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+S+ + LT+ T+TK P R + S + + A GT + E LF +P R
Sbjct: 105 LSSLCALGKLTVETRTKDEPVGTRLEFAHSGVVTGERKMARPVGTAVTVEKLFSTLPVRS 164
Query: 433 KALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKK---QNENLADIRTNVNSSHSEVIGNI 488
K + +EY K+ +++ YA+ V +N A +RT +SS + I +
Sbjct: 165 KEFSRNIRKEYGKVISLLNAYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITV 224
Query: 489 YGNNISRRVRRFS 501
+G N + ++ F+
Sbjct: 225 FGLNTFKCLQPFN 237
Score = 74 (31.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
+ +++ ++Y K +P L+ C+ + DVNV P K ++ F E I+ ++ +E
Sbjct: 279 VSKLVNELYRSSNAK-QYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIE 337
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 282 (104.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 64/184 (34%), Positives = 111/184 (60%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I V K GL +++QDNG+GI + + + + TSKL+ ++DL+++ TFGFRGEA
Sbjct: 43 ATTIDVRFKNQGLDSIEVQDNGSGISSSNYESIALKHYTSKLSNYDDLSTLQTFGFRGEA 102
Query: 373 LASISHVAHLTIITKT-KTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
L+S+ ++H TI+T T K +P A + + S KLK +G +GT + E+LF ++P
Sbjct: 103 LSSLCALSHFTIVTCTQKEAPKATKLEFETSGKLKST-SVVSGQRGTTVSVENLFKSLPV 161
Query: 431 RRKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIG 486
RR+ L++ E+ K+ +++++YA V FT+ +Q + + T N + E I
Sbjct: 162 RRRELERNIKREWGKVVNLLNQYACIQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENII 221
Query: 487 NIYG 490
N++G
Sbjct: 222 NVFG 225
Score = 257 (95.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 51/119 (42%), Positives = 83/119 (69%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D + +++I +G+VI + KEL+EN+LDA +T+I V K GL +++QDNG+G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT-KTSPCA 124
I + + + + TSKL+ ++DL+++ TFGFRGEAL+S+ ++H TI+T T K +P A
Sbjct: 67 ISSSNYESIALKHYTSKLSNYDDLSTLQTFGFRGEALSSLCALSHFTIVTCTQKEAPKA 125
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 281 (104.0 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 68/183 (37%), Positives = 105/183 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+V + GL L+++QDNG+GI E+ + V + TSKL+ ++DL + TFGFRGEA
Sbjct: 35 ATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKHYTSKLSSYDDLLHLQTFGFRGEA 94
Query: 373 LASISHVAHLTIIT-KTKTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
L+S+ ++ I T + +P A R + S KL+ + AG +GT E LF +P
Sbjct: 95 LSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKT-EVVAGQKGTVASVESLFRKLPV 153
Query: 431 RRKAL-KQPSEEYNKIADVVSRYAVHNPHVGFTLK--KQNENLADIRTNVNSSHSEVIGN 487
RR+ L K EY K+ +++ YA + V FT+K + + + TN N + E I N
Sbjct: 154 RRRELEKNIKREYGKVLNLLHAYACISTGVRFTIKNTQAKKTVVVFATNGNPTTKENIAN 213
Query: 488 IYG 490
+YG
Sbjct: 214 VYG 216
Score = 226 (84.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 19 AAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCER 78
++G+VI + +KEL+ENSLDA +TSI+V + GL L+++QDNG+GI E+ + V +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 79 FTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT-KTKTSPCAYR 126
TSKL+ ++DL + TFGFRGEAL+S+ ++ I T + +P A R
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATR 119
Score = 89 (36.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMT---FLLFINN-P-----IKRMIEQVYSIYLPKGSFPF 257
D ++V G I+ F + T +LF+N+ P I + I +VY + S PF
Sbjct: 244 DKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS-PF 302
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHE-DTIIERVQSMLEK 298
V+ MD DVNV P K + LH+ +IE ++ L+K
Sbjct: 303 VFADFHMDTNAYDVNVSPDKRTI-LLHDAGALIESLKQSLQK 343
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEK 298
VHP + ++ + E+ +IE Q +LEK
Sbjct: 822 VHPKRLDLTAVEEEIVIEN-QVILEK 846
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 281 (104.0 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 68/183 (37%), Positives = 105/183 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+V + GL L+++QDNG+GI E+ + V + TSKL+ ++DL + TFGFRGEA
Sbjct: 35 ATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKHYTSKLSSYDDLLHLQTFGFRGEA 94
Query: 373 LASISHVAHLTIIT-KTKTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
L+S+ ++ I T + +P A R + S KL+ + AG +GT E LF +P
Sbjct: 95 LSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKT-EVVAGQKGTVASVESLFRKLPV 153
Query: 431 RRKAL-KQPSEEYNKIADVVSRYAVHNPHVGFTLK--KQNENLADIRTNVNSSHSEVIGN 487
RR+ L K EY K+ +++ YA + V FT+K + + + TN N + E I N
Sbjct: 154 RRRELEKNIKREYGKVLNLLHAYACISTGVRFTIKNTQAKKTVVVFATNGNPTTKENIAN 213
Query: 488 IYG 490
+YG
Sbjct: 214 VYG 216
Score = 226 (84.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 19 AAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCER 78
++G+VI + +KEL+ENSLDA +TSI+V + GL L+++QDNG+GI E+ + V +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 79 FTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT-KTKTSPCAYR 126
TSKL+ ++DL + TFGFRGEAL+S+ ++ I T + +P A R
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATR 119
Score = 89 (36.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMT---FLLFINN-P-----IKRMIEQVYSIYLPKGSFPF 257
D ++V G I+ F + T +LF+N+ P I + I +VY + S PF
Sbjct: 244 DKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS-PF 302
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHE-DTIIERVQSMLEK 298
V+ MD DVNV P K + LH+ +IE ++ L+K
Sbjct: 303 VFADFHMDTNAYDVNVSPDKRTI-LLHDAGALIESLKQSLQK 343
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEK 298
VHP + ++ + E+ +IE Q +LEK
Sbjct: 822 VHPKRLDLTAVEEEIVIEN-QVILEK 846
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 281 (104.0 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 68/183 (37%), Positives = 105/183 (57%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI+V + GL L+++QDNG+GI E+ + V + TSKL+ ++DL + TFGFRGEA
Sbjct: 35 ATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKHYTSKLSSYDDLLHLQTFGFRGEA 94
Query: 373 LASISHVAHLTIIT-KTKTSPCAYRASYIDS-KLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
L+S+ ++ I T + +P A R + S KL+ + AG +GT E LF +P
Sbjct: 95 LSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKT-EVVAGQKGTVASVESLFRKLPV 153
Query: 431 RRKAL-KQPSEEYNKIADVVSRYAVHNPHVGFTLK--KQNENLADIRTNVNSSHSEVIGN 487
RR+ L K EY K+ +++ YA + V FT+K + + + TN N + E I N
Sbjct: 154 RRRELEKNIKREYGKVLNLLHAYACISTGVRFTIKNTQAKKTVVVFATNGNPTTKENIAN 213
Query: 488 IYG 490
+YG
Sbjct: 214 VYG 216
Score = 226 (84.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 19 AAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCER 78
++G+VI + +KEL+ENSLDA +TSI+V + GL L+++QDNG+GI E+ + V +
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALK 70
Query: 79 FTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT-KTKTSPCAYR 126
TSKL+ ++DL + TFGFRGEAL+S+ ++ I T + +P A R
Sbjct: 71 HYTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATR 119
Score = 89 (36.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 207 DDAFQLKVTGWITNVNFSTKKMT---FLLFINN-P-----IKRMIEQVYSIYLPKGSFPF 257
D ++V G I+ F + T +LF+N+ P I + I +VY + S PF
Sbjct: 244 DKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS-PF 302
Query: 258 VYLSLCMDPKNVDVNVHPTKHEVHFLHE-DTIIERVQSMLEK 298
V+ MD DVNV P K + LH+ +IE ++ L+K
Sbjct: 303 VFADFHMDTNAYDVNVSPDKRTI-LLHDAGALIESLKQSLQK 343
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEK 298
VHP + ++ + E+ +IE Q +LEK
Sbjct: 822 VHPKRLDLTAVEEEIVIEN-QVILEK 846
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 257 (95.5 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 51/120 (42%), Positives = 82/120 (68%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
P I+ ++ V++RI +G+VI ++A+KEL+ENSLDA +TSI++ ++ G Q+ DNG
Sbjct: 15 PLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNG 74
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
GI + ++ + TSKL F DL +++T+GFRGEAL+S+ + +LT+ T+TK P A
Sbjct: 75 CGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVA 134
Score = 237 (88.5 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 58/182 (31%), Positives = 94/182 (51%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI++ ++ G Q+ DNG GI + ++ + TSKL F DL +++T+GFRGEA
Sbjct: 53 ATSIEINLRDYGEDYFQVIDNGCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEA 112
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
L+S+ + +LT+ T+TK P A ++ S L K A GT + LF N+P R
Sbjct: 113 LSSLCALGNLTVETRTKNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRS 172
Query: 433 KALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKK---QNENLADIRTNVNSSHSEVIGNI 488
K K+ +EY K+ +++ YA+ V F +N + T S + I +
Sbjct: 173 KEFKRNIRKEYGKLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITV 232
Query: 489 YG 490
+G
Sbjct: 233 FG 234
Score = 69 (29.3 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 29/125 (23%), Positives = 57/125 (45%)
Query: 192 IASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKKMTF---LLFINN-PIK--RMIEQV 245
I++ +L+ +S+ ++D +V G+++ T + FIN P+ ++ + V
Sbjct: 235 ISTFTSLQPVSICVSEDC---RVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLV 291
Query: 246 YSIYLPKGS--FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGS 303
+Y S +P L + D+NV P K +V F E ++I ++ L + S
Sbjct: 292 NELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSS 351
Query: 304 NTSRV 308
N S +
Sbjct: 352 NASYI 356
Score = 46 (21.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 41/183 (22%), Positives = 82/183 (44%)
Query: 307 RVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTF 366
+VF++ TS+ ++++G L + N + + RF + ++ D +S+F
Sbjct: 327 KVFFSDETSVIGSLREG-LNEIYSSSNAS--------YIVNRFEEN--SEQPDKAGVSSF 375
Query: 367 GFRGEALAS--ISHVAHLTIITKT--KTSPCAYRASYIDS-----KLKDPIKPCAGNQGT 417
+ L+ + V+ T + + K +P + R ID+ K K IK C +G
Sbjct: 376 QKKSNLLSEGIVLDVSSKTRLGEAIEKENP-SLREVEIDNSSPMEKFKFEIKACGTKKGE 434
Query: 418 -QIIAEDLFYNIPTRRKALKQ--PSEEYNKIA-DVVSR--YAVHNPHVGFTL-KKQNENL 470
+ D+ + T K L Q +E+ + D+ SR +A + T+ K+++EN+
Sbjct: 435 GSLSVHDVTHLDKTPSKGLPQLNVTEKVTDASKDLSSRSSFAQSTLNTFVTMGKRKHENI 494
Query: 471 ADI 473
+ I
Sbjct: 495 STI 497
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 242 (90.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 48/120 (40%), Positives = 80/120 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D+ +N I +G+VI + A+KEL+ENS+DA +T++++ +K+ G + +++ DNG+G
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
+ + + + TSKL F DL SI T+GFRGEAL+S+ +++ I T+TK A R
Sbjct: 62 VEPSNFVALTMKHCTSKLESFSDLLSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQR 121
Score = 229 (85.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 57/199 (28%), Positives = 107/199 (53%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T++++ +K+ G + +++ DNG+G+ + + + TSKL F DL SI T+GFRGEA
Sbjct: 38 ATTVEIRLKEYGEEFIEVIDNGSGVEPSNFVALTMKHCTSKLESFSDLLSIETYGFRGEA 97
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+S+ +++ I T+TK A R + + K++ P A GT + +LF +P R
Sbjct: 98 LSSLCSLSNCIITTRTKNQVTAQRLVFDKEGKIQTQT-PVAREVGTTVQLSNLFKGLPVR 156
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
+ K+ +EY K+ ++ YA+ + + T Q + + T S+ + + N
Sbjct: 157 YQEFKRNIKKEYAKLLTILQAYALISTNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLIN 216
Query: 488 IYGNNISRRVRRFSSASQS 506
++G +S+ + F+ AS S
Sbjct: 217 VFGTKMSQSLDEFT-ASDS 234
Score = 82 (33.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 233 FINNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV 292
F ++ + + I +Y + +GS+P V ++ M N DVNV P K + E ++ +
Sbjct: 306 FEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLI 365
Query: 293 QSMLEKTLLGSNTSRVFYT 311
L KT+ + S VF T
Sbjct: 366 TDGL-KTMWETAQS-VFDT 382
>UNIPROTKB|E2RAQ2 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_536002.1
Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840
Uniprot:E2RAQ2
Length = 930
Score = 233 (87.1 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 46/112 (41%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KELLENSLDA +TSI V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI VA + I T+T
Sbjct: 61 IKAIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRT 112
Score = 220 (82.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 59/185 (31%), Positives = 96/185 (51%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K LL ++ +TSI V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELLENSLD----AGATSIDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK+ EDL +++T+GFRGEAL SI VA + I T+T + + Y
Sbjct: 64 IDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ I KP QGT + LF N+P R++ K+ +E K+ D++ Y +
Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181
Query: 455 HNPHV 459
P +
Sbjct: 182 LKPEL 186
Score = 89 (36.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 35/147 (23%), Positives = 74/147 (50%)
Query: 180 SEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI-------TNVNFSTKKMTFLL 232
S++ V +L A + N+E D Q+ ++G++ ++ + ST + +F+
Sbjct: 204 SDRQVALRAVLGTAVMGNMEPFQYHPEDS--QIYLSGFLPKHDVDHSSTSLSTPERSFI- 260
Query: 233 FINN-PIK-----RMIEQVYSIY-LPKGS--FPFVYLSLCMDPKNVDVNVHPTKHEVHFL 283
FINN P+ ++I Y++ L + S +P +L + + +VDVN+ P K +V
Sbjct: 261 FINNRPVHQKDILKLIRHYYNLKCLKEASRLYPIFFLKIDVPTADVDVNITPDKSQVLIQ 320
Query: 284 HEDTIIERVQSMLEKTLLGSNTSRVFY 310
+++ ++ +++++ T GS S Y
Sbjct: 321 NKEAVLIALENLMT-TCYGSLPSTNSY 346
Score = 38 (18.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 235 NNPIKRMIEQVYSIYLPKG 253
N IKR IEQ I L G
Sbjct: 632 NRQIKRAIEQESQISLKDG 650
>UNIPROTKB|F1P0J4 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AADN02034562 EMBL:AADN02034563
IPI:IPI00590399 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701
Uniprot:F1P0J4
Length = 916
Score = 222 (83.2 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 41/112 (36%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ +VI + +KEL+ENSLDA +T+I + ++ G ++++DNG G
Sbjct: 1 MKQLSAETVRLLSSSQVITSVVSVVKELIENSLDASATTIDIRLENYGFDKIEVRDNGNG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D+ ++ + TSK++ EDL ++T+GFRGEAL SI ++ + + T+T
Sbjct: 61 IKVADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLVTTRT 112
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 59/218 (27%), Positives = 106/218 (48%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L +I V S++ K L+ ++ +T+I + ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQVITSVVSVV-KELIENSLD----ASATTIDIRLENYGFDKIEVRDNGNGIKV 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D+ ++ + TSK++ EDL ++T+GFRGEAL SI ++ + + T+T + +
Sbjct: 64 ADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLVTTRTADDDISTQYVL 123
Query: 400 IDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKAL---KQPSEEYNKIADVVSRYAVHN 456
S KP QGT + LF N+P R++ ++ EE K+ D++ Y +
Sbjct: 124 DSSGHVTSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVHDLLIAYGIIK 183
Query: 457 PHVGFTLKKQNENLADI-RTNVNSSHSEVIGNIYGNNI 493
P + T N A I + N S H ++ G +
Sbjct: 184 PELRITFV---HNKAVIWQKNRVSDHKMACMSVLGTAV 218
Score = 99 (39.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 26/86 (30%), Positives = 54/86 (62%)
Query: 222 NFSTKKMTFLLFINN-PI-KRMIEQVYSIYLPKGS---FPFVYLSLCMDPKNVDVNVHPT 276
+ S+ + +F+ F+N+ P+ ++ I + YS+ + K S +P +L++ + VDVNV P
Sbjct: 251 SLSSSERSFI-FVNSRPVHQKEILKYYSVLMQKDSTRLYPVFFLNITVPASAVDVNVTPD 309
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLG 302
K EV ++++++ V+++L K+L G
Sbjct: 310 KTEVLLQYKESVLLAVENVL-KSLYG 334
>UNIPROTKB|F1MW63 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:DAAA02003905 EMBL:DAAA02003906
EMBL:DAAA02003907 IPI:IPI00702663 UniGene:Bt.20671
Ensembl:ENSBTAT00000025019 Uniprot:F1MW63
Length = 932
Score = 242 (90.2 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 46/112 (41%), Positives = 77/112 (68%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ +VI + +KEL+ENSLDA++TSI V ++ G ++++DNG G
Sbjct: 1 MKQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK++ EDL +++T+GFRGEAL SI +A ++I TKT
Sbjct: 61 IKAIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKT 112
Score = 242 (90.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 67/226 (29%), Positives = 114/226 (50%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L +I V S++++ + S +R +TSI V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQVITSVVSVVKELIENSLDAR-----ATSIDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK++ EDL +++T+GFRGEAL SI +A ++I TKT + Y
Sbjct: 64 IDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAADN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ I KP QGT + A LF N+P R++ K+ +E KI D++ Y +
Sbjct: 122 VLDGGGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYGI 181
Query: 455 HNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRF 500
P V N+ + +T V S H + ++ G + + F
Sbjct: 182 LKPDVRIVFI-HNKAIIWQKTRV-SDHKMALMSVLGTTVMGNMESF 225
Score = 76 (31.8 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 27/107 (25%), Positives = 57/107 (53%)
Query: 222 NFSTKKMTFLLFINN-PIK-----RMIEQVYSIYLPKGS---FPFVYLSLCMDPKNVDVN 272
+ ST + +F+ FIN+ P+ ++I Y++ K S +P +L + + +VDVN
Sbjct: 251 SLSTPERSFI-FINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPTADVDVN 309
Query: 273 VHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVT 319
+ P K +V ++++++ +++++ T GS S Y +S V+
Sbjct: 310 LTPDKSQVLLQNKESVLIALENLMT-TRYGSLPSTNSY-ESNKTDVS 354
Score = 37 (18.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 235 NNPIKRMIEQVYSIYLPKG 253
N IKR IEQ + L G
Sbjct: 632 NKQIKRAIEQESQVSLKDG 650
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 235 (87.8 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 43/116 (37%), Positives = 83/116 (71%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+IK + + V++I +G+V+ A A+KEL+ENS+DA +T +++ +K GL+ +++ DNG+
Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGS 85
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
G+ + +++ + ++ TSK+ +F DL + TFGFRGEAL+S+ ++ + I T+ K++
Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKST 141
Score = 225 (84.3 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 50/180 (27%), Positives = 99/180 (55%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T +++ +K GL+ +++ DNG+G+ + +++ + ++ TSK+ +F DL + TFGFRGEA
Sbjct: 63 ATLVEIKLKDQGLQSVEVSDNGSGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEA 122
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ + I T+ K++ + + ++K PCA GT ++ +LF +P R
Sbjct: 123 LSSLCALSDMVIQTRHKSTDVGVKVELDHEGRIKKR-SPCARGVGTTVLLANLFSTLPVR 181
Query: 432 RKAL-KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHS--EVIGNI 488
R+ + +E+ K+ ++ Y + G + N +T V +H EV+ NI
Sbjct: 182 RRDFTRNIKKEFTKMCQILQAYCLVTK--GVRILCSNHTPKGAKTIVLQTHGDQEVMANI 239
Score = 82 (33.9 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 203 VEGTDDA-FQLKVTGWITNVNF----STKKMTFLLFINN-P-----IKRMIEQVYSIYLP 251
VE + A FQL+ G+I++ S++ F F+N+ P I +++ +VY Y
Sbjct: 291 VERLNQADFQLE--GFISSCRHGAGRSSRDRQFF-FVNSRPCDPKNIAKVMNEVYHRYNV 347
Query: 252 KGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 311
+ PF+YL++ +VDVN+ P K ++ +E ++ ++ L T T F
Sbjct: 348 QQQ-PFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF--GQTPATFQM 404
Query: 312 QSTSI 316
Q+T+I
Sbjct: 405 QNTTI 409
>ZFIN|ZDB-GENE-030616-528 [details] [associations]
symbol:pms1 "PMS1 postmeiotic segregation increased
1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HSSP:P54278 CTD:5378 HOVERGEN:HBG031886
KO:K10864 IPI:IPI00868181 RefSeq:NP_958476.2 UniGene:Dr.85558
ProteinModelPortal:Q8JFR9 STRING:Q8JFR9 GeneID:368631
KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079
ArrayExpress:Q8JFR9 Uniprot:Q8JFR9
Length = 896
Score = 239 (89.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 58/181 (32%), Positives = 101/181 (55%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
S+S++V ++ GL ++++DNG+GI+ D+ ++ + TSK++ EDL + T+GFRGEA
Sbjct: 37 SSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEA 96
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRR 432
LASI ++ + I TKT + + S + KP QGT + A +LF N+P RR
Sbjct: 97 LASICAISEVIITTKTADDDFSIQYSVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRR 156
Query: 433 KAL---KQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIY 489
+ K+ +E ++ +++ YAV P + TL N+ + ++ V S H + +
Sbjct: 157 QYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTLS-HNKAVVWQKSRV-SDHRTALMAVL 214
Query: 490 G 490
G
Sbjct: 215 G 215
Score = 238 (88.8 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 47/112 (41%), Positives = 75/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K L V + + +VI N +KEL+ENSLDA S+S++V ++ GL ++++DNG+G
Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D+ ++ + TSK++ EDL + T+GFRGEALASI ++ + I TKT
Sbjct: 61 IKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKT 112
Score = 77 (32.2 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 204 EGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN-PIK-----RMIEQVYSIYLPKGS--- 254
E T D F K + + + ST +F+ F+N+ P+ ++I+Q Y+
Sbjct: 233 EITIDGFFPKPGSDLNSTSSSTTDKSFI-FVNSRPVHHKEILKLIKQYYTSAQSNSESVS 291
Query: 255 --FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG-SNTSRVFYT 311
+P +++ + VDVN+ P K EV ++D ++ V++ML +L G SN T
Sbjct: 292 RRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLI-SLYGYSNGEENLKT 350
Query: 312 QSTSIQVT 319
VT
Sbjct: 351 AGNPPDVT 358
Score = 41 (19.5 bits), Expect = 9.1e-20, Sum P(3) = 9.1e-20
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 436 KQPS----EEYNKIA--DVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEV 484
K+PS E+ K+ +++S +V P F+L +Q+ ++ N +S +V
Sbjct: 502 KKPSNVIVEKMAKLTAYELISNRSVRQPSSAFSLFEQDTRSQVLQENPKASPQDV 556
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 237 (88.5 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 46/110 (41%), Positives = 77/110 (70%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+VI + A+KEL+ENS+DA +T+I + +K G+ L+++ DNG G
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTIST 124
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/183 (30%), Positives = 100/183 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 51 ATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEA 110
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R + D K K P +GT + + LFY +P R
Sbjct: 111 LSSLCALSDVTISTCHGSASVGTRLVF-DHNGKITQKTPYPRPKGTTVSVQHLFYTLPVR 169
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIGN 487
K ++ +EY+K+ V+ Y + + V + Q + A + T+ S E IG+
Sbjct: 170 YKEFQRNIKKEYSKMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGS 229
Query: 488 IYG 490
++G
Sbjct: 230 VFG 232
Score = 77 (32.2 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 246 YSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLG 302
Y +Y + +PFV L++ +D + VD+NV P K ++ L E+ ++ V L+ +L+G
Sbjct: 310 YHMY-NRHQYPFVVLNVSVDSECVDINVTPDKRQI-LLQEEKLLLAV---LKTSLIG 361
>UNIPROTKB|Q9RTR0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243230 "Deinococcus radiodurans R1" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
PIR:G75364 RefSeq:NP_295419.1 ProteinModelPortal:Q9RTR0
GeneID:1800018 KEGG:dra:DR_1696 PATRIC:21631024 OMA:ATMACHA
ProtClustDB:CLSK445200 BioCyc:DRAD243230:GH46-2065-MONOMER
Uniprot:Q9RTR0
Length = 547
Score = 221 (82.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 48/116 (41%), Positives = 72/116 (62%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
P I L V IAAGEV+ RP + ++EL+EN+LDA ++ I++ V GGL+ +Q++DN
Sbjct: 2 PTPIHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDN 61
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRGEALASISHVAHLTIITK 117
G+GI + + + R TSKLT + S+S T GFRGEAL + + L + T+
Sbjct: 62 GSGIAAQSVPLAPARHATSKLTAGPETGSLSVTTLGFRGEALWAAAQAGELELTTR 117
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRG 370
++ I++ V GGL+ +Q++DNG+GI + + + R TSKLT + S+S T GFRG
Sbjct: 41 ASRIEIEVDGGGLERVQVRDNGSGIAAQSVPLAPARHATSKLTAGPETGSLSVTTLGFRG 100
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQGTQIIAEDLFYNIPT 430
EAL + + L + T+ A R ++ + + GT + LF +P
Sbjct: 101 EALWAAAQAGELELTTRPAAQVGAARLRAQGDAVE--VSRTSAPAGTTVTVSQLFARLPA 158
Query: 431 RRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYG 490
R + + E I ++ RY +H+ + + L + T+ + H + +YG
Sbjct: 159 RLRTQASAAAEVRDITALLGRYVLHHSALHWRLTVDGDPRL---THAPADHRGAVATVYG 215
Query: 491 NNISRRV 497
+ RV
Sbjct: 216 PLSANRV 222
Score = 87 (35.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 238 IKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLE 297
++R + Y+ LP G+ P L L + P++ D N+HP K V + RV+ +
Sbjct: 262 LERAVIDAYAELLPAGTAPLCVLDLTVAPEDYDPNIHPAKQVVALADLPAVALRVRDAVA 321
Query: 298 KTLLG 302
L G
Sbjct: 322 GALAG 326
>RGD|1359511 [details] [associations]
symbol:Pms1 "postmeiotic segregation increased 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006298 "mismatch repair" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 RGD:1359511 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 HSSP:P23367 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886
KO:K10864 EMBL:BC061722 IPI:IPI00421583 RefSeq:NP_001009535.1
UniGene:Rn.47945 ProteinModelPortal:Q6P7D0 SMR:Q6P7D0 STRING:Q6P7D0
GeneID:494322 KEGG:rno:494322 UCSC:RGD:1359511 NextBio:697597
Genevestigator:Q6P7D0 Uniprot:Q6P7D0
Length = 919
Score = 230 (86.0 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 43/112 (38%), Positives = 75/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ + I + +KEL+ENSLDA + SI V ++ G ++I+DNG G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D+ ++ ++ TSK++ EDL +++T+GFRGEAL +I +VA + + T+T
Sbjct: 61 IKAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRT 112
Score = 222 (83.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 58/201 (28%), Positives = 101/201 (50%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI V ++ G ++I+DNG GI+ D+ ++ ++ TSK++ EDL +++T+GFRGEA
Sbjct: 37 ANSIDVKLENYGFDKIEIRDNGAGIKAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEA 96
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPT 430
L +I +VA + + T+T + Y+ + KP QGT + LF N+P
Sbjct: 97 LGAICNVAEVVVTTRTAADD--FSTQYVLDGSGHILSQKPSHLGQGTTVTVLKLFKNLPV 154
Query: 431 RRKALKQPS---EEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGN 487
RR+ P +E + D++ YAV P + T N+ + ++ V H + +
Sbjct: 155 RRQFYSTPKKCKDELKNVQDLLISYAVLKPDLRITFV-HNKAVIWQKSRV-PDHRMALMS 212
Query: 488 IYGNNIS---RRVRRFSSASQ 505
+ G + V R+ SQ
Sbjct: 213 VLGTAVMGNMESVERYCEDSQ 233
Score = 83 (34.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 64/310 (20%), Positives = 131/310 (42%)
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI----- 218
T H + + P ++ + +L A + N+E SVE + Q+ + G
Sbjct: 189 TFVHNKAVIWQKSRVPDHRMALMS-VLGTAVMGNME--SVERYCEDSQIHLRGLFPKHDA 245
Query: 219 --TNVNFSTKKMTFLLFINN-PIK-----RMIEQVYSIYLPKGS---FPFVYLSLCMDPK 267
+ + ST + +F+ FIN+ P+ ++I Y++ K S +P +L + +
Sbjct: 246 DHNSTSLSTPERSFI-FINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSA 304
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQS----TSIQVTVKQG 323
VD+N+ P K +V ++++++ ++++L T G + Y + +S V + +
Sbjct: 305 EVDINLTPDKSQVLLQNKESVLIALENLL-MTCYGPLPTTESYENNRVDVSSANVVISET 363
Query: 324 G-LKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFED--LNSISTFGF-RGEALASISHV 379
+L + +G + + D + F + + D LN G G SH+
Sbjct: 364 TETDVLFNKMESSGNKYPNADTLAIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHI 423
Query: 380 AHLTI--ITKTKTSPCAYRASYIDSKLKDPIKPCAGNQG---TQIIAEDLFYNIPTRRKA 434
T I + S A ++ + ++ D I+ G G T ED +P KA
Sbjct: 424 NKDTFQNIPRNNLSSEANQSKHSETHSADSIEHIQGENGRSGTGENGEDGKKTLP--EKA 481
Query: 435 LKQPSEEYNK 444
L+ +++++K
Sbjct: 482 LEICADDWSK 491
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 235 NNPIKRMIEQVYSIYLPKG 253
NN +K+ IEQ + L G
Sbjct: 621 NNQMKKAIEQEAQVSLKDG 639
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 239 (89.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 69/233 (29%), Positives = 115/233 (49%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TSI V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSIDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK+ EDL +++T+GFRGEAL SI VA + I T+T + + Y
Sbjct: 64 VDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ I KP QGT + A LF N+P R++ K+ +E K+ D++ Y V
Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGV 181
Query: 455 HNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSA 507
P V N+ + +T V S H + ++ G + + F S+ +
Sbjct: 182 LKPEVRLVFI-HNKAIIWQKTRV-SDHKMALMSVLGTAVMGNMEAFQYHSEES 232
Score = 232 (86.7 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 45/112 (40%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TSI V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI VA + I T+T
Sbjct: 61 IKAVDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRT 112
Score = 75 (31.5 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 31/138 (22%), Positives = 68/138 (49%)
Query: 189 LLEIASLNNLELLSVEGTDDAFQLKVTGWITNVN-------FSTKKMTFLLFINN-PIK- 239
+L A + N+E + Q+ ++G++ N ST + +F+ FIN+ P+
Sbjct: 213 VLGTAVMGNMEAFQYHSEES--QIYLSGFLPKHNADHSVTSLSTPERSFI-FINSRPVHQ 269
Query: 240 ----RMIEQVYSIYLPKGS---FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV 292
++I Y++ K + +P +L + + +VDVN+ P K +V ++++++ +
Sbjct: 270 KDILKLIRHYYNLKCLKETTRLYPIFFLKIDVPTVDVDVNLTPDKSQVLLQNKESVLIAL 329
Query: 293 QSMLEKTLLGSNTSRVFY 310
++++ T GS S Y
Sbjct: 330 ENLMT-TCYGSLPSTNSY 346
Score = 37 (18.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 221 VNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKG 253
V + K L N IK+ IEQ I L G
Sbjct: 609 VKYEEKATKDLERYNRQIKKAIEQESQISLKDG 641
>UNIPROTKB|D4A651 [details] [associations]
symbol:D4A651 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
IPI:IPI00782442 PRIDE:D4A651 Ensembl:ENSRNOT00000043714
ArrayExpress:D4A651 Uniprot:D4A651
Length = 910
Score = 230 (86.0 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 43/112 (38%), Positives = 75/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ + I + +KEL+ENSLDA + SI V ++ G ++I+DNG G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D+ ++ ++ TSK++ EDL +++T+GFRGEAL +I +VA + + T+T
Sbjct: 61 IKAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRT 112
Score = 222 (83.2 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 58/201 (28%), Positives = 101/201 (50%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ SI V ++ G ++I+DNG GI+ D+ ++ ++ TSK++ EDL +++T+GFRGEA
Sbjct: 37 ANSIDVKLENYGFDKIEIRDNGAGIKAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEA 96
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPT 430
L +I +VA + + T+T + Y+ + KP QGT + LF N+P
Sbjct: 97 LGAICNVAEVVVTTRTAADD--FSTQYVLDGSGHILSQKPSHLGQGTTVTVLKLFKNLPV 154
Query: 431 RRKALKQPS---EEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGN 487
RR+ P +E + D++ YAV P + T N+ + ++ V H + +
Sbjct: 155 RRQFYSTPKKCKDELKNVQDLLISYAVLKPDLRITFV-HNKAVIWQKSRV-PDHRMALMS 212
Query: 488 IYGNNIS---RRVRRFSSASQ 505
+ G + V R+ SQ
Sbjct: 213 VLGTAVMGNMESVERYCEDSQ 233
Score = 76 (31.8 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 32/149 (21%), Positives = 71/149 (47%)
Query: 164 TVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWI----- 218
T H + + P ++ + +L A + N+E SVE + Q+ + G
Sbjct: 189 TFVHNKAVIWQKSRVPDHRMALMS-VLGTAVMGNME--SVERYCEDSQIHLRGLFPKHDA 245
Query: 219 --TNVNFSTKKMTFLLFINN-PIK-----RMIEQVYSIYLPKGS---FPFVYLSLCMDPK 267
+ + ST + +F+ FIN+ P+ ++I Y++ K S +P +L + +
Sbjct: 246 DHNSTSLSTPERSFI-FINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSA 304
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSML 296
VD+N+ P K +V ++++++ ++++L
Sbjct: 305 EVDINLTPDKSQVLLQNKESVLIALENLL 333
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 235 NNPIKRMIEQVYSIYLPKG 253
NN +K+ IEQ + L G
Sbjct: 616 NNQMKKAIEQEAQVSLKDG 634
>UNIPROTKB|P54277 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006200 "ATP catabolic
process" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 GO:GO:0005524 GO:GO:0016887 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:CH471058 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
Orphanet:144 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:U13695 EMBL:AB102870
EMBL:AB102875 EMBL:AY267352 EMBL:AC008122 EMBL:BC096330
EMBL:BC096332 IPI:IPI00005541 IPI:IPI00654710 IPI:IPI00896518
PIR:S47597 RefSeq:NP_000525.1 RefSeq:NP_001121615.1
RefSeq:NP_001121616.1 UniGene:Hs.111749 PDB:2CS1 PDBsum:2CS1
ProteinModelPortal:P54277 SMR:P54277 IntAct:P54277 STRING:P54277
PhosphoSite:P54277 DMDM:1709683 PaxDb:P54277 PRIDE:P54277
DNASU:5378 Ensembl:ENST00000409823 Ensembl:ENST00000441310
Ensembl:ENST00000447232 GeneID:5378 KEGG:hsa:5378 UCSC:uc002urh.4
CTD:5378 GeneCards:GC02P190648 H-InvDB:HIX0029784 HGNC:HGNC:9121
HPA:CAB010233 MIM:600258 neXtProt:NX_P54277 PharmGKB:PA33447
HOGENOM:HOG000039972 HOVERGEN:HBG031886 InParanoid:P54277 KO:K10864
OMA:PFFHHLT OrthoDB:EOG41C6VK PhylomeDB:P54277 ChiTaRS:PMS1
EvolutionaryTrace:P54277 GenomeRNAi:5378 NextBio:20866
ArrayExpress:P54277 Bgee:P54277 CleanEx:HS_PMS1
Genevestigator:P54277 GermOnline:ENSG00000064933 Uniprot:P54277
Length = 932
Score = 230 (86.0 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 43/112 (38%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
Score = 224 (83.9 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 63/233 (27%), Positives = 114/233 (48%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T + Y
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ + KP QGT + A LF N+P R++ K+ +E KI D++ + +
Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181
Query: 455 HNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSA 507
P + N+ + ++ V S H + ++ G + + F S+ +
Sbjct: 182 LKPDLRIVFV-HNKAVIWQKSRV-SDHKMALMSVLGTAVMNNMESFQYHSEES 232
Score = 76 (31.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 28/124 (22%), Positives = 66/124 (53%)
Query: 189 LLEIASLNNLELLSVEGTDDAFQLKVTGWITN-------VNFSTKKMTFLLFINN-PIK- 239
+L A +NN+E S + + Q+ ++G++ + ST + +F+ FIN+ P+
Sbjct: 213 VLGTAVMNNME--SFQYHSEESQIYLSGFLPKCDADHSFTSLSTPERSFI-FINSRPVHQ 269
Query: 240 ----RMIEQVYSIYLPKGS---FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERV 292
++I Y++ K S +P +L + + +VDVN+ P K +V ++++++ +
Sbjct: 270 KDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIAL 329
Query: 293 QSML 296
++++
Sbjct: 330 ENLM 333
>UNIPROTKB|C9JF76 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI01013621 ProteinModelPortal:C9JF76 SMR:C9JF76
STRING:C9JF76 Ensembl:ENST00000424766 HOGENOM:HOG000137699
ArrayExpress:C9JF76 Bgee:C9JF76 Uniprot:C9JF76
Length = 194
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 43/112 (38%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
Score = 214 (80.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 56/183 (30%), Positives = 95/183 (51%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T + Y
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ + KP QGT + A LF N+P R++ K+ +E KI D++ + +
Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181
Query: 455 HNP 457
P
Sbjct: 182 LKP 184
>UNIPROTKB|E9PC40 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI00386764 ProteinModelPortal:E9PC40 SMR:E9PC40
Ensembl:ENST00000409985 UCSC:uc010zfz.1 ArrayExpress:E9PC40
Bgee:E9PC40 Uniprot:E9PC40
Length = 181
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 43/112 (38%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
Score = 168 (64.2 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 38/109 (34%), Positives = 64/109 (58%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 388
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
>UNIPROTKB|Q5XG96 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 ChiTaRS:PMS1 EMBL:BC084548
IPI:IPI00479899 SMR:Q5XG96 STRING:Q5XG96 Ensembl:ENST00000374826
HOGENOM:HOG000249052 HOVERGEN:HBG055685 Uniprot:Q5XG96
Length = 165
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 43/112 (38%), Positives = 74/112 (66%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
Score = 168 (64.2 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 38/109 (34%), Positives = 64/109 (58%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 388
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRT 112
>UNIPROTKB|G3N1K7 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 GeneTree:ENSGT00530000063289
EMBL:DAAA02058333 Ensembl:ENSBTAT00000065929 Uniprot:G3N1K7
Length = 180
Score = 229 (85.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 43/100 (43%), Positives = 72/100 (72%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK +D V++I +G+V+ + A+KEL+ENS+DA +TSI + +K G++L+++ DNG G
Sbjct: 77 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 136
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASI 106
+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+
Sbjct: 137 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSL 176
Score = 152 (58.6 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+TSI + +K G++L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 113 ATSIDLRLKDYGVELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEA 172
Query: 373 LASI 376
L+S+
Sbjct: 173 LSSL 176
>UNIPROTKB|Q753U9 [details] [associations]
symbol:AFR226C "AFR226Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
EMBL:AE016819 GenomeReviews:AE016819_GR GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 RefSeq:NP_985773.1 ProteinModelPortal:Q753U9
STRING:Q753U9 EnsemblFungi:AAS53597 GeneID:4622035
KEGG:ago:AGOS_AFR226C OMA:PPRIRIN PhylomeDB:Q753U9 Uniprot:Q753U9
Length = 704
Score = 204 (76.9 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 42/127 (33%), Positives = 76/127 (59%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTV--KQGGLKLLQIQDNG 64
I ++++ ++ + I P A+KELL+N++DA ++++ + V K GG + ++D+G
Sbjct: 3 IHRIEDESKWKVVSASFIYSPTTAVKELLDNAIDAGASNVHIEVDSKTGGCDYISVRDDG 62
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL---ASIS-HVAHLTIITKTKT 120
G+ D ++C TTSKL ++ED+++ T GFRGEAL A++S H + + T+ K+
Sbjct: 63 NGVGVVDRHMMCLNHTTSKLRKYEDVSTCGTLGFRGEALFMLATLSNHCGTMEVSTRCKS 122
Query: 121 SPCAYRW 127
RW
Sbjct: 123 ERMGTRW 129
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 316 IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEAL-- 373
I+V K GG + ++D+G G+ D ++C TTSKL ++ED+++ T GFRGEAL
Sbjct: 44 IEVDSKTGGCDYISVRDDGNGVGVVDRHMMCLNHTTSKLRKYEDVSTCGTLGFRGEALFM 103
Query: 374 -ASIS-HVAHLTIITKTKTSPCAYRASYIDS-KLKDPIKPCAGNQ-GTQIIAEDLFYNIP 429
A++S H + + T+ K+ R S ++K+ GT + L + +
Sbjct: 104 LATLSNHCGTMEVSTRCKSERMGTRWQVDGSGEVKEGSTSSVPMPVGTTVTIRKLLHGLR 163
Query: 430 TRRKALK-QPSEEYNKIADVVSRYAV 454
R + +P + + I+ +V +Y +
Sbjct: 164 ARHVTISSRPRKSLDDISQLVLQYTL 189
Score = 96 (38.9 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIY-LPKGSFPFVYLSLCMDPKNV 269
Q K T I V + + M+ L + + + +M+ + Y Y LP + V L C DP V
Sbjct: 270 QTKKT--IKAVALNRRPMSLSLSLGSAVNKMLNKTYRSYSLPDPTIWMVELE-C-DPHLV 325
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
DVN+ PTK + T+I+ +Q LE ++
Sbjct: 326 DVNIEPTKDDAAISSLATLIQCLQDALEPIII 357
Score = 40 (19.1 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 326 KLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTF 366
+LL++Q + TG +E++ I ++ +K + +LN S +
Sbjct: 592 ELLKLQYSSTGPSEENVPIQKDKIKPTK-DRRRNLNMFSEY 631
>UNIPROTKB|Q3BDU3 [details] [associations]
symbol:PMS1 "Rhabdomyosarcoma antigen MU-RMS-40.10E"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 Pfam:PF00505 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 HOGENOM:HOG000039972
HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AY540751 IPI:IPI00916989
SMR:Q3BDU3 STRING:Q3BDU3 Ensembl:ENST00000450931 Uniprot:Q3BDU3
Length = 659
Score = 250 (93.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 76/307 (24%), Positives = 152/307 (49%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T + +
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQ 120
Query: 127 WCTYXXXXXXXXXXXXSQYLQRDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVER 186
+ L + +G R ++ +P+ K Y ++K +
Sbjct: 121 YVL----------DGSGHILSQKPSHLGQGTTVTALRLFKN--LPVRKQFYSTAKKCKDE 168
Query: 187 A-----CLLEIASLN-NLELLSVEGTD--DAFQLKVTGWITNVNFSTKKMTFLLFINN-P 237
L+ L +L ++ V F K + + ST + +F+ FIN+ P
Sbjct: 169 IKKIQDLLMSFGILKPDLRIVFVHNKIYLSGFLPKCDADHSFTSLSTPERSFI-FINSRP 227
Query: 238 IK-----RMIEQVYSIYLPKGS---FPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTII 289
+ ++I Y++ K S +P +L + + +VDVN+ P K +V ++++++
Sbjct: 228 VHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVL 287
Query: 290 ERVQSML 296
+++++
Sbjct: 288 IALENLM 294
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASY 399
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + I T+T + Y
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQY 121
Query: 400 IDSKLKDPI--KPCAGNQGTQIIAEDLFYNIPTRRK---ALKQPSEEYNKIADVVSRYAV 454
+ + KP QGT + A LF N+P R++ K+ +E KI D++ + +
Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181
Query: 455 HNPHVGFTLKKQNENLADIRTNVNSSHS 482
P + L+ ++ HS
Sbjct: 182 LKPDLRIVFVHNKIYLSGFLPKCDADHS 209
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 231 (86.4 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 57/184 (30%), Positives = 99/184 (53%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+ I++ K GL+ ++ DNG GI + + + + TSK+ +F+D+ + T GFRGEA
Sbjct: 40 ANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEA 99
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAG-NQGTQIIAEDLFYNIPTR 431
L+S+ +A L++IT T + P A + Y D K N+GT ++ LF+N+P R
Sbjct: 100 LSSLCGIAKLSVITTT-SPPKADKLEY-DMVGHITSKTTTSRNKGTTVLVSQLFHNLPVR 157
Query: 432 RKALKQP-SEEYNKIADVVSRYAVHNPHVGFTL----KKQNENLADIRTNVNSSHSEVIG 486
+K + ++ K V+ YA+ N + F++ K +NL + T NSS + I
Sbjct: 158 QKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLI-LSTMRNSSMRKNIS 216
Query: 487 NIYG 490
+++G
Sbjct: 217 SVFG 220
Score = 225 (84.3 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 43/113 (38%), Positives = 75/113 (66%)
Query: 6 KIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGT 65
+I ++++ V+RI +G+VI A+KEL++NS+DA + I++ K GL+ ++ DNG
Sbjct: 3 QIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGD 62
Query: 66 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
GI + + + + TSK+ +F+D+ + T GFRGEAL+S+ +A L++IT T
Sbjct: 63 GIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTT 115
Score = 75 (31.5 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 210 FQLKVTGWITNVNF----STKKMTFLLFINNPIK-----RMIEQVYSIYLPKGSFPFVYL 260
++++V G+I+ +F ++K F+ P++ + +VY + FP V+L
Sbjct: 258 YKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTF-NNVQFPAVFL 316
Query: 261 SLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSML 296
+L + +DVNV P K + +E +I+ ++ L
Sbjct: 317 NLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTL 352
Score = 45 (20.9 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 157 EEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKV 214
+EK + T++ V + KSQ + VE + + E+ L+NL + G F+LK+
Sbjct: 706 DEKYNFETLQ--AVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNG----FKLKI 757
Score = 39 (18.8 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 462 TLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRR 499
++K ++NL+D+ N N S+ E NI + +R + +
Sbjct: 471 SIKTDSQNLSDLNLN-NFSNPE-FQNITSPDKARSLEK 506
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 211 (79.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 43/112 (38%), Positives = 73/112 (65%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IKKL E V ++ + VI A++E++ NS+DA++T I +++ L +++DNG G
Sbjct: 25 IKKLKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSF-EVKDNGFG 83
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKT 118
+ E++ V +R TSK+ DL S+ TFG+RGE+LAS+S+++ L II+ +
Sbjct: 84 LSYENLKFVGDRNCTSKINSLSDLKSLKTFGYRGESLASLSNISSLDIISNS 135
Score = 164 (62.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 39/123 (31%), Positives = 70/123 (56%)
Query: 268 NVDVNV-HPTKHEVHF-LHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGL 325
N++ NV K EV + +I ++ +E+ + S +R +T I +++ L
Sbjct: 19 NINNNVIKKLKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDAR-----ATVISISINLSNL 73
Query: 326 KLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTII 385
+++DNG G+ E++ V +R TSK+ DL S+ TFG+RGE+LAS+S+++ L II
Sbjct: 74 SF-EVKDNGFGLSYENLKFVGDRNCTSKINSLSDLKSLKTFGYRGESLASLSNISSLDII 132
Query: 386 TKT 388
+ +
Sbjct: 133 SNS 135
Score = 92 (37.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/153 (21%), Positives = 67/153 (43%)
Query: 352 SKLTQFEDLNSIS-TFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSK-LKDPIK 409
+ L+ L+ IS +FG + S V I+ +S C + +++ + +
Sbjct: 121 ASLSNISSLDIISNSFGSTIQKSISFGKVDQFKILDNNNSSSCDNNNNNVNNNNINNNNN 180
Query: 410 PCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNEN 469
N GT + DLF N P RR+ L P+ + I + A+ P + F++ + ++
Sbjct: 181 NSIAN-GTIVKIRDLFKNYPVRRQGLYHPNLKLI-IKKRIEIIALSFPKIVFSVYDETKS 238
Query: 470 LADIRTNVNSSHSEVIGNIYGNNISRRVRRFSS 502
L ++T ++S + YG + ++ +S
Sbjct: 239 LTILKTPKDTSFLSYFKHFYGQEMMNKLEYVTS 271
Score = 61 (26.5 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 30/104 (28%), Positives = 42/104 (40%)
Query: 353 KLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCA 412
KL ED + G LA+ + T T T TSP +++S S L PIK
Sbjct: 983 KLLFLEDGKPTNN-GNSNNTLAAAATTTTTTTTTTTTTSP--FQSSPPSSPLSQPIKSII 1039
Query: 413 GNQGT---QIIAEDLF------YNIPTRRKALKQPSEEYNKIAD 447
Q T + D+F + + K LK ++ N IAD
Sbjct: 1040 SQQTTPPKNVRKNDIFDEDEKSNTLSSPIKKLKTENDIQNNIAD 1083
Score = 45 (20.9 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 148 RDKEQIGDK-EEKQWYRTVEHTLVPLMKSQYQPSEKI 183
+D E +GD EEK++ +++ + L K ++I
Sbjct: 1386 QDDESLGDDDEEKEFIHDSDYSKIELAKKYNYTDDRI 1422
Score = 37 (18.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 218 ITNVNFSTKKMTF 230
IT NFSTK +F
Sbjct: 604 ITFTNFSTKNNSF 616
Score = 37 (18.1 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 457 PHV--GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQS 506
PH+ T N N + N N++++ N NN ++ + F Q+
Sbjct: 777 PHITNNSTQNNNNNNNNNNNNNNNNNNNNNNNNNNNNNENKDLVPFVKVEQN 828
>UNIPROTKB|F8W8L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468
GO:GO:0030983 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917668
ProteinModelPortal:F8W8L1 SMR:F8W8L1 Ensembl:ENST00000342075
ArrayExpress:F8W8L1 Bgee:F8W8L1 Uniprot:F8W8L1
Length = 108
Score = 217 (81.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 40/108 (37%), Positives = 71/108 (65%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 114
I+ D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + +
Sbjct: 61 IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVQL 108
Score = 155 (59.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 35/105 (33%), Positives = 61/105 (58%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L II V S++ K L+ ++ +TS+ V ++ G ++++DNG GI+
Sbjct: 9 VRLLSSSQIITSVVSVV-KELIENSLD----AGATSVDVKLENYGFDKIEVRDNGEGIKA 63
Query: 340 EDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTI 384
D ++ ++ TSK+ EDL +++T+GFRGEAL SI +A + +
Sbjct: 64 VDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVQL 108
>UNIPROTKB|G4MRP9 [details] [associations]
symbol:MGG_04627 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR015434 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:CM001231 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF9
RefSeq:XP_003710876.1 ProteinModelPortal:G4MRP9
EnsemblFungi:MGG_04627T0 GeneID:2677851 KEGG:mgr:MGG_04627
Uniprot:G4MRP9
Length = 928
Score = 222 (83.2 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 48/120 (40%), Positives = 75/120 (62%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L + V + A VI P + +KELL+NS+DAK+TSI+V V + + ++++DNG G
Sbjct: 3 IAPLPQDAVRLLRAHVVISTPVSVVKELLDNSIDAKATSIEVLVSRNTVDRIEVRDNGVG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSI--STFGFRGEALASISHVAHLTIITKTKTSPCA 124
I D + + R TSKL ++L +I ++ GFRGEALA+++ VA +T+ T+T A
Sbjct: 63 IETRDFEALGRRGHTSKLKSADELENIGGTSLGFRGEALAAVAAVAKVTVTTRTAADDTA 122
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 58/192 (30%), Positives = 104/192 (54%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRK 339
V L +I S++ K LL ++ ++TSI+V V + + ++++DNG GI
Sbjct: 11 VRLLRAHVVISTPVSVV-KELLDNSID----AKATSIEVLVSRNTVDRIEVRDNGVGIET 65
Query: 340 EDMDIVCERFTTSKLTQFEDLNSI--STFGFRGEALASISHVAHLTIITKTKTSPCAYRA 397
D + + R TSKL ++L +I ++ GFRGEALA+++ VA +T+ T+T A
Sbjct: 66 RDFEALGRRGHTSKLKSADELENIGGTSLGFRGEALAAVAAVAKVTVTTRTAADDTATVF 125
Query: 398 SYI-DSK--LKDPIKPCAGNQGTQIIAEDLFYNIPTRRK-ALKQPSEEYNKIADVVSRYA 453
+ + K LK+ IK GT + A ++F +P R+K A+K+ K+ +++ YA
Sbjct: 126 DLLANGKGTLKNTIKSTP--VGTTVTASEMFERLPVRKKVAIKEAKSTMVKMKQLLTAYA 183
Query: 454 VHNPHVGFTLKK 465
+ P + ++K+
Sbjct: 184 LARPQLKLSIKE 195
Score = 67 (28.6 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 256 PFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKT 299
PF+ L++ + DV++ P K +V F E II+ ++ E T
Sbjct: 325 PFIALNIKCPQGSYDVSIGPAKDDVLFTDEQGIIDACDALFENT 368
>UNIPROTKB|A4D2B8 [details] [associations]
symbol:PMS2P1 "Putative postmeiotic segregation increased
2-like protein 1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0016301 GO:GO:0006298 EMBL:CH236956 EMBL:CH471091
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
EMBL:U38964 EMBL:AB017004 EMBL:BC067809 EMBL:BC110395 EMBL:D38435
EMBL:D38499 IPI:IPI00477733 IPI:IPI00871484 IPI:IPI00953669
PIR:JC2398 PIR:JC2399 UniGene:Hs.634244 UniGene:Hs.661055
ProteinModelPortal:A4D2B8 SMR:A4D2B8 STRING:A4D2B8
PhosphoSite:A4D2B8 DMDM:74706301 PaxDb:A4D2B8 PRIDE:A4D2B8
GeneCards:GC07M099899 HGNC:HGNC:9123 MIM:605038 neXtProt:NX_A4D2B8
HOVERGEN:HBG108273 InParanoid:Q13400 ChiTaRS:PMS2P1
Genevestigator:A4D2B8 Uniprot:A4D2B8
Length = 440
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 47/115 (40%), Positives = 78/115 (67%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK +D V++I +G V+ + A+KEL+ENSLDA +T+I + +K G+ L+++
Sbjct: 210 EPAKAIKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVS 269
Query: 62 DNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
NG G+ +E+ + + + TSK+ +F DL + TFGFRGEAL+S+ ++ +TI T
Sbjct: 270 GNGCGVEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTIST 324
Score = 157 (60.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 38/126 (30%), Positives = 69/126 (54%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEA 372
+T+I + +K G+ L+++ NG G+ +E+ + + + TSK+ +F DL + TFGFRGEA
Sbjct: 251 ATNIDLKLKDYGVDLIEVSGNGCGVEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEA 310
Query: 373 LASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPTR 431
L+S+ ++ +TI T ++ R + D K K P +G + + LF +P
Sbjct: 311 LSSLCALSDVTISTCHVSAKVGTRLVF-DHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVH 369
Query: 432 RKALKQ 437
K ++
Sbjct: 370 HKEFQR 375
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 68/221 (30%), Positives = 117/221 (52%)
Query: 283 LHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDM 342
L I +Q +E+ +L S + +T + V + KL Q+ DNG+G+ EDM
Sbjct: 13 LRSGVAIFSLQQCVEELILNSIDAG-----ATCVAVKIDIEACKL-QVIDNGSGMCLEDM 66
Query: 343 DIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLT-IITKTKTSPCAYRASYID 401
+ V R+ TSK + EDL+++ +GFRGEA++SI +A + I ++TK S Y S+ +
Sbjct: 67 EKVGLRYNTSKCSSLEDLDNLHFYGFRGEAISSIVSLAEMVEISSRTKQSVKTYVKSFNE 126
Query: 402 SKLKD-----PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRYAVHN 456
+ + ++P AG T + +LF+N+P RRK + P E +I V ++ +
Sbjct: 127 TNALEVFEAQTVRPSAG---TTVSVYNLFHNMPVRRKRM-DPVLETERIRQRVEAISLMH 182
Query: 457 PHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRV 497
P V FT+KK+N ++ + SS I+G N ++++
Sbjct: 183 PSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKL 223
Score = 186 (70.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/120 (38%), Positives = 72/120 (60%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V ++ +G I ++EL+ NS+DA +T + V + KL Q+ DNG+G
Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKL-QVIDNGSG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLT-IITKTKTSPCAY 125
+ EDM+ V R+ TSK + EDL+++ +GFRGEA++SI +A + I ++TK S Y
Sbjct: 61 MCLEDMEKVGLRYNTSKCSSLEDLDNLHFYGFRGEAISSIVSLAEMVEISSRTKQSVKTY 120
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 162 YRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEG 205
YR ++ ++ M+ Q +K + ACL+ A N E + EG
Sbjct: 904 YRFTKN-MIHTMRVINQVDKKFL--ACLINTAGQNTSESSTDEG 944
>UNIPROTKB|Q7NL47 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:251221 "Gloeobacter violaceus PCC 7421" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:BA000045 GenomeReviews:BA000045_GR HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 RefSeq:NP_924225.1
ProteinModelPortal:Q7NL47 GeneID:2598842 KEGG:gvi:gvip188
PATRIC:22041969 OMA:NTHKAIN BioCyc:GVIO251221:GH9A-1330-MONOMER
Uniprot:Q7NL47
Length = 573
Score = 220 (82.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 52/120 (43%), Positives = 72/120 (60%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + V +AAGEVI PA ++EL++NSLDA + I+V+ ++ Q+QDNG G
Sbjct: 46 IRPLADQTVRLLAAGEVIDSPAAVVRELVDNSLDAGADRIRVSFWPESWRV-QVQDNGLG 104
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYR 126
E++ + TSKL EDL + T GFRGE L SI+ VA L I+T T T+ A R
Sbjct: 105 FEAEELPMAARSHATSKLGAIEDLWRLRTLGFRGEGLHSIAVVARLEILTCTPTARTATR 164
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 52/132 (39%), Positives = 70/132 (53%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
+Q+QDNG G E++ + TSKL EDL + T GFRGE L SI+ VA L I+T
Sbjct: 96 VQVQDNGLGFEAEELPMAARSHATSKLGAIEDLWRLRTLGFRGEGLHSIAVVARLEILTC 155
Query: 388 TKTSPCAYRASYIDSK--LKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKI 445
T T+ A RA Y D K L + +P A GT + +LF P RR+ L + +
Sbjct: 156 TPTARTATRARY-DHKGELVES-QPAAAAPGTVVTVSELFELQPVRRRFLADTKAQVRAV 213
Query: 446 ADVVSRYAVHNP 457
+V RYA+ P
Sbjct: 214 TQLVHRYALAYP 225
Score = 46 (21.3 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEV 280
L G P + L + VD N HP K EV
Sbjct: 319 LRPGRQPVCIVQLILPADEVDWNRHPAKLEV 349
>ASPGD|ASPL0000042310 [details] [associations]
symbol:AN1564 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 EMBL:BN001307 GO:GO:0016887
EMBL:AACD01000025 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 213 (80.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 49/119 (41%), Positives = 71/119 (59%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L V I + +I P + KELL+N+LDA +T + V + Q + LLQ++DNG G
Sbjct: 3 IVALPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRGEALASISHVAH-LTIITKTKTSP 122
I +D +VC+R TSK+ EDL + + GFRGEALAS + ++ L I T+ +T P
Sbjct: 63 IPADDYMVVCKRTFTSKIHTVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDP 121
Score = 213 (80.0 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 63/182 (34%), Positives = 94/182 (51%)
Query: 296 LEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLT 355
L K LL N F +T + V + Q + LLQ++DNG GI +D +VC+R TSK+
Sbjct: 26 LAKELL-DNALDAF---ATLVSVEISQDTVGLLQVKDNGHGIPADDYMVVCKRTFTSKIH 81
Query: 356 QFEDLNSIS--TFGFRGEALASISHVAH-LTIITKTKTSPCAYRASYIDSKLKDPIKPCA 412
EDL + + GFRGEALAS + ++ L I T+ +T P Y + + +
Sbjct: 82 TVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDPVGSSLEYGRNGELTRTERIS 141
Query: 413 GNQGTQIIAEDLFYNIPTRRK-ALKQPSEEYNKIADVVSRYAVHNPHVGFT---LKKQNE 468
GT + +LF IP RR+ A+K + KI +V YA+ P + + LK +NE
Sbjct: 142 HPVGTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAYAMARPSIRLSFKVLKAKNE 201
Query: 469 NL 470
+L
Sbjct: 202 SL 203
Score = 59 (25.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 256 PFVYLS-LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKT 299
PF+ + LC+ D N+ P+K +V F ++ ++ V+ +L T
Sbjct: 316 PFLCVHVLCLGGA-YDANIEPSKDDVLFENQQAVLSLVEDLLRDT 359
>UNIPROTKB|Q5BD16 [details] [associations]
symbol:AN1564.2 "DNA mismatch repair protein, putative
(AFU_orthologue; AFUA_8G05820)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 EMBL:BN001307 GO:GO:0016887 EMBL:AACD01000025
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 213 (80.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 49/119 (41%), Positives = 71/119 (59%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L V I + +I P + KELL+N+LDA +T + V + Q + LLQ++DNG G
Sbjct: 3 IVALPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRGEALASISHVAH-LTIITKTKTSP 122
I +D +VC+R TSK+ EDL + + GFRGEALAS + ++ L I T+ +T P
Sbjct: 63 IPADDYMVVCKRTFTSKIHTVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDP 121
Score = 213 (80.0 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 63/182 (34%), Positives = 94/182 (51%)
Query: 296 LEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLT 355
L K LL N F +T + V + Q + LLQ++DNG GI +D +VC+R TSK+
Sbjct: 26 LAKELL-DNALDAF---ATLVSVEISQDTVGLLQVKDNGHGIPADDYMVVCKRTFTSKIH 81
Query: 356 QFEDLNSIS--TFGFRGEALASISHVAH-LTIITKTKTSPCAYRASYIDSKLKDPIKPCA 412
EDL + + GFRGEALAS + ++ L I T+ +T P Y + + +
Sbjct: 82 TVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETDPVGSSLEYGRNGELTRTERIS 141
Query: 413 GNQGTQIIAEDLFYNIPTRRK-ALKQPSEEYNKIADVVSRYAVHNPHVGFT---LKKQNE 468
GT + +LF IP RR+ A+K + KI +V YA+ P + + LK +NE
Sbjct: 142 HPVGTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAYAMARPSIRLSFKVLKAKNE 201
Query: 469 NL 470
+L
Sbjct: 202 SL 203
Score = 59 (25.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 256 PFVYLS-LCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSMLEKT 299
PF+ + LC+ D N+ P+K +V F ++ ++ V+ +L T
Sbjct: 316 PFLCVHVLCLGGA-YDANIEPSKDDVLFENQQAVLSLVEDLLRDT 359
>UNIPROTKB|O95744 [details] [associations]
symbol:PMS2P2 "Putative postmeiotic segregation increased
2-like protein 2" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131 GO:GO:0032407
GO:GO:0016446 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
EMBL:AB017005 IPI:IPI00032884 HSSP:P54278 ProteinModelPortal:O95744
SMR:O95744 STRING:O95744 PaxDb:O95744 PRIDE:O95744
GeneCards:GC07M074880 HGNC:HGNC:9127 neXtProt:NX_O95744
HOVERGEN:HBG108275 InParanoid:O95744 Genevestigator:O95744
Uniprot:O95744
Length = 297
Score = 204 (76.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 42/120 (35%), Positives = 78/120 (65%)
Query: 1 MDQPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQ 59
+ +P K IK +D V++I +G V+ + A+K+++ NSLDA +T+I + +K G+ L++
Sbjct: 70 LTEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIE 129
Query: 60 IQDNGTGIRKEDMD---IVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIIT 116
+ NG G+ +E+ + + + TSK+ +F DL + TFGF+G+AL+S+ ++ +TI T
Sbjct: 130 VSGNGCGVEEENFEGLSLSALKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTIST 189
Score = 158 (60.7 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 41/165 (24%), Positives = 87/165 (52%)
Query: 277 KHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTG 336
+ VH + ++ + + ++K ++G++ +T+I + +K G+ L+++ NG G
Sbjct: 82 RKSVHQICSGPVVLSLSTAVKK-IVGNSLD----AGATNIDLKLKDYGMDLIEVSGNGCG 136
Query: 337 IRKEDMD---IVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPC 393
+ +E+ + + + TSK+ +F DL + TFGF+G+AL+S+ ++ +TI T ++
Sbjct: 137 VEEENFEGLSLSALKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKV 196
Query: 394 AYRASYI-DSKLKDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQ 437
R + D K+ P +GT + + LF +P R K ++
Sbjct: 197 GTRLVFDHDGKIIKKT-PYPHPRGTTVSVKQLFSTLPVRHKEFQR 240
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 200 (75.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/184 (28%), Positives = 96/184 (52%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++ S + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGE
Sbjct: 3 RAESSRSKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGE 62
Query: 372 ALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIK-PCAGNQGTQIIAEDLFYNIPT 430
AL+S+ ++ +TI T ++ R + D K K P +GT + + LF +P
Sbjct: 63 ALSSLCALSDVTISTCHASAKVGTRLMF-DHNGKIIQKTPYPRPRGTTVSVQQLFSTLPV 121
Query: 431 RRKALKQP-SEEYNKIADVVSRYAVHNPHVGFTLKKQ---NENLADIRTNVNSSHSEVIG 486
R K ++ +EY K+ V+ Y + + + + Q + + T + S E IG
Sbjct: 122 RHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIG 181
Query: 487 NIYG 490
+++G
Sbjct: 182 SVFG 185
Score = 149 (57.5 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 42 KSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 101
++ S + +K G+ L+++ DNG G+ +E+ + + + TSK+ +F DL + TFGFRGE
Sbjct: 3 RAESSRSKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGE 62
Query: 102 ALASISHVAHLTIIT 116
AL+S+ ++ +TI T
Sbjct: 63 ALSSLCALSDVTIST 77
Score = 107 (42.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 50/184 (27%), Positives = 91/184 (49%)
Query: 168 TLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDDAFQLKVTGWITNVNFSTKK 227
+L+P + Q PS+ + E L +L+NL +S F + T + ST +
Sbjct: 191 SLIPFV--QLPPSDSVCEEYGLSCSDALHNLFYIS------GFISQCTHGVGRS--STDR 240
Query: 228 MTFLLFIN----NPIK--RMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVH 281
F FIN +P K R++ +VY +Y + +PFV L++ +D + VD+NV P K ++
Sbjct: 241 QFF--FINRRPCDPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQI- 296
Query: 282 FLHEDTIIERVQSMLEKTLLG---SNTSRVFYTQSTSIQVTVKQGGLKLLQIQD-NGTGI 337
L E+ ++ V L+ +L+G S+ +++ +Q + V +G L + D +
Sbjct: 297 LLQEEKLLLAV---LKTSLIGMFDSDVNKLNVSQQPLLDV---EGNLIKMHAADLEKPMV 350
Query: 338 RKED 341
K+D
Sbjct: 351 EKQD 354
>SGD|S000004025 [details] [associations]
symbol:MLH2 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006298 "mismatch repair"
evidence=IEA;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 SGD:S000004025
Prosite:PS00058 GO:GO:0005524 EMBL:BK006945 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:Z73207
PIR:S64862 RefSeq:NP_013135.1 ProteinModelPortal:Q07980 SMR:Q07980
DIP:DIP-2413N IntAct:Q07980 MINT:MINT-502091 STRING:Q07980
PRIDE:Q07980 EnsemblFungi:YLR035C GeneID:850722 KEGG:sce:YLR035C
CYGD:YLR035c HOGENOM:HOG000113599 OrthoDB:EOG4B5SFH NextBio:966802
Genevestigator:Q07980 GermOnline:YLR035C PANTHER:PTHR10073:SF9
Uniprot:Q07980
Length = 695
Score = 178 (67.7 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 39/117 (33%), Positives = 67/117 (57%)
Query: 17 RIAAGEVIQRPANALKELLENSLD--AKSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDI 74
+I + I P A++ELL+NS+D AK I V GG + + ++D+G+G+ D
Sbjct: 13 KIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKDDGSGVDIIDRPS 72
Query: 75 VCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAH----LTIITKTKTSPCAYRW 127
+C +TTSK++ D++ ++T GFRGEAL +S++ + + + TKT +W
Sbjct: 73 MCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADDVIGEKW 129
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/220 (22%), Positives = 109/220 (49%)
Query: 289 IERVQSMLEKTLLGSNTSRVFYTQSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCER 348
+ V+ +L+ ++ S +VF I V GG + + ++D+G+G+ D +C
Sbjct: 24 VAAVRELLDNSI-DSGAKKVF------IDVDSTTGGCEYISVKDDGSGVDIIDRPSMCLE 76
Query: 349 FTTSKLTQFEDLNSISTFGFRGEALASISHVAHL--TIITKTKTSPCAYRASY-IDSK-- 403
+TTSK++ D++ ++T GFRGEAL +S++ + ++ +TKT+ + +DSK
Sbjct: 77 YTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADDVIGEKWLVDSKGG 136
Query: 404 LKDPIK-PCAGNQGTQIIAEDLFYNIPTRRKALK-QPSEEYNKIADVVSRYA-VH-NPHV 459
+ + + + GT +I L + R + +P + ++++ +++ Y+ +H N
Sbjct: 137 ITNGKRYKVSCPVGTTVILRKLLGGLRARYLEISSRPRKTFDELIYLINHYSLIHRNIRF 196
Query: 460 GFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRR 499
F+L +N A R + + I ++ R+++
Sbjct: 197 YFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKK 236
Score = 72 (30.4 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 30/154 (19%), Positives = 73/154 (47%)
Query: 149 DKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVERACLLEIASLNNLELLSVEGTDD 208
+++Q+ + + + R +L+ +K P IVE +++ NL+L+ +
Sbjct: 210 ERKQMQETLDPKISRARSLSLLARLKKPV-PLNFIVEENFVID--EKINLDLILPRMVPE 266
Query: 209 AFQLKVTGWITNVNFSTKKMTFLLFINNPIKRMIEQVYSIYLPKGSFPFV-YLSLCMDPK 267
+ + + ++ + + ++ L I +++ +Y + P V +++L D K
Sbjct: 267 SDVINIKRRFKFLSVNERALSLNLETGKTISKLLSSIYRDFSLLD--PMVWFINLNCDTK 324
Query: 268 NVDVNVHPTKHEVHFLHEDTIIERVQSMLEKTLL 301
+DVN+ P K++V + I +++++ L K LL
Sbjct: 325 LLDVNIEPEKNDVMIKSFEVIFKKIENKL-KLLL 357
>UNIPROTKB|Q75F21 [details] [associations]
symbol:AAL093C "AAL093Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 InterPro:IPR020568
SUPFAM:SSF54211 EMBL:AE016814 GenomeReviews:AE016814_GR
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 KO:K08739
OMA:KACRSAI OrthoDB:EOG46X2HJ RefSeq:NP_982449.1
ProteinModelPortal:Q75F21 STRING:Q75F21 EnsemblFungi:AAS50273
GeneID:4618574 KEGG:ago:AGOS_AAL093C PhylomeDB:Q75F21
Uniprot:Q75F21
Length = 734
Score = 203 (76.5 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 56/183 (30%), Positives = 101/183 (55%)
Query: 279 EVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQSTS----IQVTVKQGGLKLLQIQDNG 334
++H L E+++ R++S L +G+ + + ++V+V ++ ++D+G
Sbjct: 8 KIHRL-EESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSVDLDRWRV-HVRDDG 65
Query: 335 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 394
G+ +E++ V + TSKL + EDL + T+GFRGE L +S+++ + +++K A
Sbjct: 66 EGLNREELAKVGQWHYTSKLRRLEDLTATDTYGFRGEGLYMLSNISRVILLSKRAGMKHA 125
Query: 395 --YRASYIDSKL---KDPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQ--PSEEYNKI-A 446
+R D+ L D I+ G GT +I EDLFYN+P RR+ L + P Y++I A
Sbjct: 126 ALHRLPATDNALPRDSDDIRLLDGAHGTTVILEDLFYNLPIRRRMLARTPPHRLYDEIRA 185
Query: 447 DVV 449
DV+
Sbjct: 186 DVL 188
Score = 177 (67.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 38/113 (33%), Positives = 72/113 (63%)
Query: 5 PKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNG 64
PKI +L+E+V R+ + I A++EL++NS+DA ++V+V ++ ++D+G
Sbjct: 7 PKIHRLEESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSVDLDRWRV-HVRDDG 65
Query: 65 TGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 117
G+ +E++ V + TSKL + EDL + T+GFRGE L +S+++ + +++K
Sbjct: 66 EGLNREELAKVGQWHYTSKLRRLEDLTATDTYGFRGEGLYMLSNISRVILLSK 118
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKK 465
YN P A S + KI + V++ N +VG ++K
Sbjct: 430 YNPPV---ASMNSSADATKILEHVAKIRTRNINVGLPVQK 466
>SGD|S000006085 [details] [associations]
symbol:MLH3 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005712
"chiasma" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IPI] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0030983 "mismatched DNA binding"
evidence=IEA;IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 SGD:S000006085 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 EMBL:BK006949 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:X96770 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 EMBL:Z73520 PIR:S65175
RefSeq:NP_015161.1 ProteinModelPortal:Q12083 SMR:Q12083
DIP:DIP-2414N IntAct:Q12083 MINT:MINT-678752 STRING:Q12083
EnsemblFungi:YPL164C GeneID:855939 KEGG:sce:YPL164C CYGD:YPL164c
GeneTree:ENSGT00550000074903 HOGENOM:HOG000113600 OMA:KACRSAI
OrthoDB:EOG46X2HJ NextBio:980696 Genevestigator:Q12083
GermOnline:YPL164C Uniprot:Q12083
Length = 715
Score = 197 (74.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 62/213 (29%), Positives = 108/213 (50%)
Query: 285 EDTIIERVQSMLEKTLLGSNTSRVFYTQ----STSIQVTVKQGGLKLLQIQDNGTGIRKE 340
+ + ER++S L S + +T+I V + L + D+G G+ +
Sbjct: 9 DSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSFA-VYDDGIGLTRS 67
Query: 341 DMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYI 400
D++I+ + TSK+ + DL ++ T+G+RG+AL SIS+V++L + +K K A+ +
Sbjct: 68 DLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWMRKFP 127
Query: 401 DSK--LKD----PIKP----CAGNQ---GTQIIAEDLFYNIPTRRKALKQ--PSEEYNKI 445
L + PI P C ++ GT +I ED+ YN+P RR+ LK+ P + +N I
Sbjct: 128 SKSVMLSENTILPIDPFWKICPWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKTFNTI 187
Query: 446 -ADVVSRYAVHNPHVGFTLKKQNENLADIRTNV 477
AD++ +H P + +L Q + I T V
Sbjct: 188 KADMLQILVMH-PMI--SLNVQYTDKLRINTEV 217
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 40/113 (35%), Positives = 73/113 (64%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+KLD V R+ + A+A++E+++NS+DA +T+I V + L + D+G G
Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSFA-VYDDGIG 63
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ + D++I+ + TSK+ + DL ++ T+G+RG+AL SIS+V++L + +K K
Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKK 116
>UNIPROTKB|Q7SCN8 [details] [associations]
symbol:NCU09373 "Predicted protein" species:367110
"Neurospora crassa OR74A" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 HSSP:P54278 EMBL:AABX02000082
RefSeq:XP_963744.1 UniGene:Ncr.24641 ProteinModelPortal:Q7SCN8
EnsemblFungi:EFNCRT00000009482 GeneID:3879893 KEGG:ncr:NCU09373
Uniprot:Q7SCN8
Length = 772
Score = 173 (66.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 41/120 (34%), Positives = 67/120 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I L E + + VI P +KELL+N+LDA +T++++ + + ++++DNG+G
Sbjct: 3 ILALPEDTRRFLGSALVITSPIFLVKELLDNALDAGATTVEILISPNTVDRVEVRDNGSG 62
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRGEALASISHVAHLTIITKTKTSPCA 124
I D + TSKL+ +DL S+ + GFRG ALAS + +A + I T+T A
Sbjct: 63 ISPSDFHHLGRPGHTSKLSSLKDLESVGCKSLGFRGVALASAAALAGIAICTRTSAESVA 122
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/159 (26%), Positives = 79/159 (49%)
Query: 313 STSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSIS--TFGFRG 370
+T++++ + + ++++DNG+GI D + TSKL+ +DL S+ + GFRG
Sbjct: 39 ATTVEILISPNTVDRVEVRDNGSGISPSDFHHLGRPGHTSKLSSLKDLESVGCKSLGFRG 98
Query: 371 EALASISHVAHLTIITKTKTSPCAYRASYIDSKLKDPIKPCAGNQ----GTQIIAEDLFY 426
ALAS + +A + I T+T A + ++ + G++ GT + DLF
Sbjct: 99 VALASAAALAGIAICTRTSAESVATILHFS----REGVAAARGHKPAPAGTSVCVTDLFG 154
Query: 427 NIPTR-RKALKQPSEEYNKIADVVSRYAVHNPHVGFTLK 464
P R ++A + + K+ ++ YA+ P V + K
Sbjct: 155 AYPVRLKRATSEATATVLKVKGLLECYALARPQVKLSFK 193
Score = 70 (29.7 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 250 LPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQSML 296
LP GS PF+ L++ + D NV P+K++V F +E+ ++ +S L
Sbjct: 317 LP-GS-PFIRLNIRCPLGSYDPNVEPSKYDVLFHNEELVLREFESFL 361
Score = 43 (20.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 145 YLQRDKEQIGDKEEKQWYRTVEHTLVPL 172
YL R ++ + DK +++ + ++ L+PL
Sbjct: 672 YLIRRQQSLADKPQRRKIQRLKTNLLPL 699
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 197 (74.4 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 56/180 (31%), Positives = 90/180 (50%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAH-LTIIT 386
+Q+ DNG G+ ED+D V R+ TSK +DL + +GFRGEALASI+ +A + I +
Sbjct: 52 VQVIDNGIGMGSEDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISS 111
Query: 387 KTKTSPCAYRASYIDSK-LK----DPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEE 441
+ S + + + K LK D +P AG T + +LFY +P RRK + P E
Sbjct: 112 RRNKSMKTFVKLFQNGKALKACEADLTRPSAG---TTVTVYNLFYQLPVRRKCM-DPRLE 167
Query: 442 YNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ K+ V ++ +P V F+L+ ++ IYG S+++R +
Sbjct: 168 FEKVRQRVEALSLMHPSVSFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIN 227
Score = 167 (63.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 42/113 (37%), Positives = 63/113 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V R+ +G I ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGIG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ ED+D V R+ TSK +DL + +GFRGEALASI+ +A I+ +
Sbjct: 61 MGSEDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSRR 113
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQ 293
DV + P K + F + DT++ +Q
Sbjct: 318 DVCLEPAKTLIEFQNWDTLLVCIQ 341
>UNIPROTKB|E1C7F3 [details] [associations]
symbol:LOC100859200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:AADN02003465 IPI:IPI00593431
ProteinModelPortal:E1C7F3 Ensembl:ENSGALT00000016763 Uniprot:E1C7F3
Length = 1424
Score = 202 (76.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 46/118 (38%), Positives = 75/118 (63%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L E V R+ +G + ++EL+ NS+DAK+T + V V K+ Q+ DNG+G
Sbjct: 2 IKHLAEDVQARLRSGVTVTSLGQCVEELVLNSIDAKATCVAVRVDLEAFKI-QVVDNGSG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCA 124
+ KED+ + +R+ TSK + DL ++ +GFRGEALASI+++A + ++ +K+S A
Sbjct: 61 MGKEDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIANMASVVEVS-SKSSKTA 117
Score = 191 (72.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 54/192 (28%), Positives = 101/192 (52%)
Query: 280 VHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT----QSTSIQVTVKQGGLKLLQIQDNGT 335
+ L ED + R++S + T LG + ++T + V V K+ Q+ DNG+
Sbjct: 2 IKHLAED-VQARLRSGVTVTSLGQCVEELVLNSIDAKATCVAVRVDLEAFKI-QVVDNGS 59
Query: 336 GIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK--TKTSPC 393
G+ KED+ + +R+ TSK + DL ++ +GFRGEALASI+++A + ++ +KT+
Sbjct: 60 GMGKEDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIANMASVVEVSSKSSKTAKT 119
Query: 394 AYRASYIDSKLKD-PIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEEYNKIADVVSRY 452
+ + L+ + + GT + +LFY +P RR+ + P E+ ++ V
Sbjct: 120 FVKLFHNGHALEVCEAELSRPSGGTTVTVCNLFYQLPVRRRCM-DPVLEFERVRQKVEAI 178
Query: 453 AVHNPHVGFTLK 464
++ +P V +L+
Sbjct: 179 SLMHPSVSLSLR 190
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQ 293
DV++ PTK + F + D ++ V+
Sbjct: 319 DVSLEPTKTLIEFQNWDVLLACVE 342
Score = 38 (18.4 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 148 RDKEQIGDKEEKQWYRTVEHTLVPLMKSQYQPSEKIVE 185
RD + K+ Y T + +PL S P K V+
Sbjct: 708 RDGRDMSTATSKRHYETSNVSDLPLATSSGIPHSKAVK 745
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 193 (73.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
+Q+ DNG G+ +D+D V R+ TSK +DL + +GFRGEALASI+ +A I+
Sbjct: 52 VQVIDNGFGMGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISS 111
Query: 388 TKTSPC-AYRASYIDSKLKDPIKPCAGN-----QGTQIIAEDLFYNIPTRRKALKQPSEE 441
K + + + K +K C N GT + +LFY +P RRK + P E
Sbjct: 112 KKNRTMKTFVKLFQNGKA---LKACEANLTRPSAGTTVTVYNLFYQLPVRRKCM-DPRLE 167
Query: 442 YNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVR 498
+ K+ + ++ +P + F+L+ ++ IYG S+++R
Sbjct: 168 FEKVRQRIEALSLMHPSISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLR 224
Score = 164 (62.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 41/113 (36%), Positives = 64/113 (56%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L V R+ +G I ++EL+ NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ +D+D V R+ TSK +DL + +GFRGEALASI+ +A I+ K
Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKK 113
Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 217 WITNVNFSTKKMTFLLFINNPI 238
W T+++ +KK+ L+ + PI
Sbjct: 722 WCTHISNGSKKIDKLICSSKPI 743
Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 270 DVNVHPTKHEVHFLHEDTIIERVQSMLEKTL 300
DV + P K + F DT++ +Q ++ L
Sbjct: 318 DVCMEPAKTLIEFQDWDTVLVCIQEAVKMFL 348
Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 235 NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDP 266
++P R +++ IY+ F +CM+P
Sbjct: 292 SSPRHRANPELHGIYVINMQCQFCEYDVCMEP 323
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 193 (73.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAH-LTIIT 386
+Q+ DNG G+ +D+D V R+ TSK +DL + +GFRGEALASI+ +A + I +
Sbjct: 52 VQVIDNGFGMGSDDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISS 111
Query: 387 KTKTSPCAYRASYIDSK-LK----DPIKPCAGNQGTQIIAEDLFYNIPTRRKALKQPSEE 441
K S + + + K LK D +P AG T + +LFY +P RRK + P E
Sbjct: 112 KKNKSMKTFVKLFQNGKALKACEADLTRPSAG---TTVTVYNLFYQLPVRRKCM-DPRLE 167
Query: 442 YNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
+ K+ + ++ +P + F+L+ ++ IYG S+++R +
Sbjct: 168 FEKVRQRIEALSLMHPTISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIN 227
Score = 166 (63.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 41/113 (36%), Positives = 63/113 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V R+ +G + ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ +D+D V R+ TSK +DL + +GFRGEALASI+ +A I+ K
Sbjct: 61 MGSDDVDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKK 113
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 211 QLKVTGWITNVNFSTKKMTFLLFINNPIKRMI 242
+ ++TG+I++ K M FL F+N KR++
Sbjct: 232 EFELTGFISSEAHYNKNMQFL-FVN---KRLV 259
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 235 NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQS 294
+NP R +++ IY+ V C DV + P K + F + DT++ +Q
Sbjct: 292 SNPRPRSNPELHGIYVIN-----VQCQFC----EYDVCLEPAKTLIEFQNWDTLLICIQE 342
Query: 295 MLEKTLL 301
+ KT L
Sbjct: 343 GV-KTFL 348
>UNIPROTKB|G3V3E0 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
GO:GO:0007130 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V3E0 SMR:G3V3E0 Ensembl:ENST00000553263
ArrayExpress:G3V3E0 Bgee:G3V3E0 Uniprot:G3V3E0
Length = 162
Score = 156 (60.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V ++ +G I ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+ K
Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKK 113
Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
+Q+ DNG G+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+
Sbjct: 52 VQVIDNGFGMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISS 111
Query: 388 TKTSPCAYRASYIDSKLKDPIKPCAGN-----QGTQIIAEDLFYNIPTRRKAL 435
K S +K C + GT + +LFY +P RRK +
Sbjct: 112 KKNRTMKTFVKLFQSG--KALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM 162
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 184 (69.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/193 (27%), Positives = 94/193 (48%)
Query: 312 QSTSIQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGE 371
++T + + V ++ Q+ DNG G+ +D++ V R+ TSK DL + + +GFRGE
Sbjct: 37 EATCVAIRVNMETFQV-QVIDNGLGMAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGE 95
Query: 372 ALASISHVAH-LTIITKTKTSPCAYRASYIDSKL-----KDPIKPCAGNQGTQIIAEDLF 425
ALASI+ +A + I +K T+ + + + K D +P G T + +LF
Sbjct: 96 ALASIADMASAVEISSKKSTTLKTFVKMFQNGKALAAREADLTRPSVG---TTVTVYNLF 152
Query: 426 YNIPTRRKALKQPSEEYNKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVI 485
Y P RRK++ P E+ K+ V ++ +P + F+L+ ++
Sbjct: 153 YQFPVRRKSM-DPRLEFEKVRQRVEALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRF 211
Query: 486 GNIYGNNISRRVR 498
IYG S+++R
Sbjct: 212 CQIYGLGKSQKLR 224
Score = 165 (63.1 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 38/115 (33%), Positives = 67/115 (58%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I+ L + V ++ +G + ++EL NS+DA++T + + V ++ Q+ DNG G
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQV-QVIDNGLG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTS 121
+ +D++ V R+ TSK DL + + +GFRGEALASI+ +A I+ K++
Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGEALASIADMASAVEISSKKST 115
Score = 63 (27.2 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 37/169 (21%), Positives = 71/169 (42%)
Query: 235 NNPIKRMIEQVYSIYLPKGSFPFVYLSLCMDPKNVDVNVHPTKHEVHFLHEDTIIERVQS 294
++P R +++ IY+ PF C DV + P K + F + DT++ VQ
Sbjct: 292 SSPRHRSASELHGIYVINVQCPF-----C----EYDVCIEPAKTLIEFQNWDTVLICVQE 342
Query: 295 MLEKTLLGSNTSRVFYTQSTS-IQVTVKQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSK 353
++K L ++F S+ I+ + G L+ GT ++ + C++ + +
Sbjct: 343 GIKKFL---KQEKLFVELSSEDIKEFNEDNGFSLI-----GTTLQTQSTHEKCDQSSFQE 394
Query: 354 LTQFEDLNSISTFGFRGEALASISHVAHLTIITKTKTSPCAYRASYIDS 402
L+S F + +A+ I+ + + T T+ A R DS
Sbjct: 395 ACN-NILDSYEMFNLQSKAVKRIATLENRT--TQNSGDSGAIRKKTEDS 440
Score = 37 (18.1 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 462 TLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFSSASQSALAR 510
TL K E+ + R ++ S + ++GN V++ + A S L+R
Sbjct: 824 TLSK--EDRLEQRPSLRESPITLAELLHGNRKPSEVKKSTEALASKLSR 870
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/179 (27%), Positives = 83/179 (46%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
+Q+ DNG G+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+
Sbjct: 52 VQVIDNGFGMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISS 111
Query: 388 TKTSPCAYRASYIDSKLKDPIKPCAGN-----QGTQIIAEDLFYNIPTRRKALKQPSEEY 442
K S +K C + GT + +LFY +P RRK + P E+
Sbjct: 112 KKNRTMKTFVKLFQSG--KALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM-DPRLEF 168
Query: 443 NKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
K+ + ++ +P + F+L+ ++ IYG S+++R S
Sbjct: 169 EKVRQRIEALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREIS 227
Score = 156 (60.0 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V ++ +G I ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+ K
Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKK 113
Score = 43 (20.2 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 234 INNPIK-RMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+N+ ++ R ++Y IY+ F +CM+P
Sbjct: 290 MNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEP 323
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 183 (69.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 49/179 (27%), Positives = 83/179 (46%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITK 387
+Q+ DNG G+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+
Sbjct: 52 VQVIDNGFGMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISS 111
Query: 388 TKTSPCAYRASYIDSKLKDPIKPCAGN-----QGTQIIAEDLFYNIPTRRKALKQPSEEY 442
K S +K C + GT + +LFY +P RRK + P E+
Sbjct: 112 KKNRTMKTFVKLFQSG--KALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM-DPRLEF 168
Query: 443 NKIADVVSRYAVHNPHVGFTLKKQNENLADIRTNVNSSHSEVIGNIYGNNISRRVRRFS 501
K+ + ++ +P + F+L+ ++ IYG S+++R S
Sbjct: 169 EKVRQRIEALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREIS 227
Score = 156 (60.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V ++ +G I ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK 119
+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A I+ K
Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKK 113
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 234 INNPIK-RMIEQVYSIYLPKGSFPFVYLSLCMDP 266
+N+ ++ R ++Y IY+ F +CM+P
Sbjct: 290 MNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEP 323
>UNIPROTKB|H0Y793 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
ProteinModelPortal:H0Y793 Ensembl:ENST00000458009 Uniprot:H0Y793
Length = 95
Score = 153 (58.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 199 ELLSVEGTDDAFQLKVTGWITNVNFSTKKMTFLLFINN------PIKRMIEQVYSIYLPK 252
EL+ + D K+ G+I+N N+S KK FLLFIN+ +++ IE VY+ YLPK
Sbjct: 8 ELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPK 67
Query: 253 GSFPFVYLSLC 263
+ PF+YL LC
Sbjct: 68 NTHPFLYLRLC 78
>UNIPROTKB|G3V384 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 EMBL:AL049780 GO:GO:0007140
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007130
GO:GO:0007144 GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762
PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V384 SMR:G3V384 Ensembl:ENST00000557648
ArrayExpress:G3V384 Bgee:G3V384 Uniprot:G3V384
Length = 106
Score = 152 (58.6 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 37/104 (35%), Positives = 60/104 (57%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
IK L V ++ +G I ++EL NS+DA++ + V V ++ Q+ DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQV-QVIDNGFG 60
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA 110
+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A
Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMA 104
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 328 LQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA 380
+Q+ DNG G+ +D++ V R+ TSK +DL + +GFRGEALA+I+ +A
Sbjct: 52 VQVIDNGFGMGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMA 104
>UNIPROTKB|Q13401 [details] [associations]
symbol:PMS2P3 "Putative postmeiotic segregation increased
2-like protein 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001909 InterPro:IPR003594 Pfam:PF01352 PROSITE:PS50805
SMART:SM00349 GO:GO:0005524 GO:GO:0006355 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:CH471220
eggNOG:COG0323 EMBL:AC018720 SUPFAM:SSF109640 HOGENOM:HOG000231475
HOVERGEN:HBG067759 UniGene:Hs.661055 HSSP:P54278 EMBL:U38979
EMBL:CR621744 EMBL:BC029646 EMBL:BC101598 IPI:IPI00022518
IPI:IPI00395560 IPI:IPI00743216 UniGene:Hs.659871
ProteinModelPortal:Q13401 SMR:Q13401 STRING:Q13401 DMDM:74722311
PRIDE:Q13401 UCSC:uc003uzd.1 GeneCards:GC07M075138 HGNC:HGNC:9128
neXtProt:NX_Q13401 InParanoid:Q13401 OrthoDB:EOG483D6N
NextBio:20894 CleanEx:HS_PMS2L3 Genevestigator:Q13401
Uniprot:Q13401
Length = 168
Score = 148 (57.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK +D V++I +G V+ + A+KEL+ENSLDA +T+I + +K G+ L+++
Sbjct: 85 EPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVS 144
Query: 62 DNGTGIRKEDMD 73
DNG G+ +E+ +
Sbjct: 145 DNGCGVEEENFE 156
>UNIPROTKB|E9PF25 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
IPI:IPI00783152 ProteinModelPortal:E9PF25 SMR:E9PF25
Ensembl:ENST00000432299 ArrayExpress:E9PF25 Bgee:E9PF25
Uniprot:E9PF25
Length = 48
Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 26/31 (83%), Positives = 31/31 (100%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLEN 37
I++LDETVVNRIAAGEVIQRPANA+KE++EN
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38
>UNIPROTKB|F2Z298 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0008630 GO:GO:0042493 GO:GO:0009636
GO:GO:0001666 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 Gene3D:3.30.565.10 GO:GO:0045190 GO:GO:0071407
GO:GO:0006303 GO:GO:0045950 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 EMBL:AC006583
GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI00795011 SMR:F2Z298 Ensembl:ENST00000442249
Ensembl:ENST00000454028 Ensembl:ENST00000457004 Uniprot:F2Z298
Length = 38
Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 26/31 (83%), Positives = 31/31 (100%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLEN 37
I++LDETVVNRIAAGEVIQRPANA+KE++EN
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38
>UNIPROTKB|A8JCH7 [details] [associations]
symbol:CHLREDRAFT_106832 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700137.1
EnsemblPlants:EDO98431 GeneID:5725681 KEGG:cre:CHLREDRAFT_106832
eggNOG:NOG304406 ProtClustDB:CLSN2703724 Uniprot:A8JCH7
Length = 86
Score = 135 (52.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 4 PPKIKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDN 63
PP ++ L + +V++I G + A+ ELL NSLDA++ ++ + + L ++D+
Sbjct: 2 PPNLRPLPKPLVDKIRTGVTLNTVPQAVVELLCNSLDAEARTVLIKLNAATLSFT-VEDD 60
Query: 64 GTGIRKEDMDIVCERFTTSKLTQFED 89
G GI ED+++V R+ TSKL D
Sbjct: 61 GCGICSEDLELVGTRYYTSKLRSLTD 86
>UNIPROTKB|C9J4L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917898
ProteinModelPortal:C9J4L1 SMR:C9J4L1 STRING:C9J4L1
Ensembl:ENST00000420421 ArrayExpress:C9J4L1 Bgee:C9J4L1
Uniprot:C9J4L1
Length = 73
Score = 128 (50.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 23/73 (31%), Positives = 46/73 (63%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
+K+L V +++ ++I + +KEL+ENSLDA +TS+ V ++ G ++++DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 67 IRKEDMDIVCERF 79
I+ D ++ ++
Sbjct: 61 IKAVDAPVMAMKY 73
>UNIPROTKB|Q13670 [details] [associations]
symbol:PMS2P11 "Putative postmeiotic segregation increased
2-like protein 11" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 GO:GO:0005524 GO:GO:0016887 GO:GO:0016301
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:NOG84763 GO:GO:0032389 PANTHER:PTHR10073 HSSP:P54278
EMBL:U38980 IPI:IPI00014453 UniGene:Hs.675888
ProteinModelPortal:Q13670 SMR:Q13670 STRING:Q13670
PhosphoSite:Q13670 DMDM:74706325 PaxDb:Q13670 PRIDE:Q13670
GeneCards:GC07P076641 HGNC:HGNC:9125 neXtProt:NX_Q13670
Genevestigator:Q13670 Uniprot:Q13670
Length = 270
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 28/72 (38%), Positives = 49/72 (68%)
Query: 3 QPPK-IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQ 61
+P K IK +D V++I +G V+ + A+KEL+ENSLDA +T+I + +K G+ L+++
Sbjct: 156 EPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVS 215
Query: 62 DNGTGIRKEDMD 73
NG G+ +E+ +
Sbjct: 216 GNGCGVEEENFE 227
>UNIPROTKB|F1LVM7 [details] [associations]
symbol:F1LVM7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 PANTHER:PTHR10073 IPI:IPI00565002
Ensembl:ENSRNOT00000051358 Uniprot:F1LVM7
Length = 154
Score = 124 (48.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 51 KQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA 110
K G ++IQDNG GI D+ + ++T K+ EDL +++T GF GEAL SI + A
Sbjct: 1 KNYGFDKMEIQDNGEGIEAVDVPVTALKYTL-KINSHEDLKNLTTCGFPGEALGSICNAA 59
Query: 111 HLTIITKTKTSPCAYRWCT-YXXXXXXXXXXXXSQYLQRDKEQIGDKE---EKQWYRTVE 166
+ ++T S A + T Y +L + K KQ+Y T +
Sbjct: 60 EV-VVT---ASAAAGDFSTQYVLDGTGHILSQNPSHLGQGTTVTALKNLLVRKQFYSTAK 115
Query: 167 HTLVPLMKSQYQPSEKI 183
L K Q +P +I
Sbjct: 116 KCKDELKKLQLKPDIRI 132
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 321 KQGGLKLLQIQDNGTGIRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVA 380
K G ++IQDNG GI D+ + ++T K+ EDL +++T GF GEAL SI + A
Sbjct: 1 KNYGFDKMEIQDNGEGIEAVDVPVTALKYTL-KINSHEDLKNLTTCGFPGEALGSICNAA 59
Query: 381 HLTI 384
+ +
Sbjct: 60 EVVV 63
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 39/118 (33%), Positives = 67/118 (56%)
Query: 7 IKKLDETVVNRIAAGEVIQRPANALKELLENSLDAKSTSIQVTVKQGGLKLLQIQDNGTG 66
I +LDE+V+ +I + + + ++ELL+NSLDA + I + + L + I DNGTG
Sbjct: 27 ILRLDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKIDLSSLSVY-IHDNGTG 85
Query: 67 IRKEDMDIVCERFTTSKLTQFEDLNSISTFGFRGEALASISHVAHLTIITKTK--TSP 122
I +D++ V + TSK + ++GEAL ++ +++LTII+K T+P
Sbjct: 86 ITPDDLEKVTLQHYTSKW---------HSHNYKGEALFALKVISNLTIISKAPDYTTP 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 512 500 0.00084 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 130
No. of states in DFA: 605 (64 KB)
Total size of DFA: 263 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 41.59u 0.08s 41.67t Elapsed: 00:00:20
Total cpu time: 41.63u 0.09s 41.72t Elapsed: 00:00:22
Start: Thu Aug 15 10:53:32 2013 End: Thu Aug 15 10:53:54 2013
WARNINGS ISSUED: 1