Your job contains 1 sequence.
>psy1958
MDQPPVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEPPTT
KAKPSSTSSNTNNTTTTTTPAYKLVRTDASEQKLDRFLSKYIADQRATSKQTSNKKYKRR
EIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVLEEL
FYQLMLHDFGNFGVFRFEGSFY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1958
(202 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|B7Z821 - symbol:MLH1 "cDNA FLJ55289, highly sim... 231 9.6e-38 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 230 2.1e-37 2
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 222 4.9e-37 2
UNIPROTKB|E9PCU2 - symbol:MLH1 "DNA mismatch repair prote... 231 5.2e-37 2
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 224 5.5e-37 2
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 231 5.9e-37 2
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 231 8.6e-37 2
UNIPROTKB|I3LT92 - symbol:MLH1 "Uncharacterized protein" ... 229 2.6e-36 2
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 229 2.9e-36 2
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 229 2.9e-36 2
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 228 4.8e-36 2
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 224 1.0e-35 2
FB|FBgn0011659 - symbol:Mlh1 "Mlh1" species:7227 "Drosoph... 318 1.0e-27 1
UNIPROTKB|Q7SA79 - symbol:NCU08309 "Putative uncharacteri... 150 3.5e-20 2
DICTYBASE|DDB_G0287393 - symbol:mlh1 "MutL DNA mismatch r... 144 7.7e-19 2
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 140 2.6e-18 3
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 140 2.6e-18 3
SGD|S000004777 - symbol:MLH1 "Protein required for mismat... 143 2.5e-17 2
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 212 3.3e-16 1
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 129 1.2e-15 2
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 194 2.9e-14 1
UNIPROTKB|E7EUC9 - symbol:MLH1 "DNA mismatch repair prote... 170 7.1e-13 1
UNIPROTKB|Q1RMN2 - symbol:MLH1 "Uncharacterized protein" ... 160 8.2e-12 1
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 111 3.3e-11 2
POMBASE|SPBC1703.04 - symbol:mlh1 "MutL family protein Ml... 158 1.9e-10 1
UNIPROTKB|Q7RE54 - symbol:PY05214 "HMLH1 gene product-rel... 107 2.0e-09 2
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 146 4.3e-09 1
GENEDB_PFALCIPARUM|PF11_0184 - symbol:PF11_0184 "DNA mism... 110 2.8e-08 2
UNIPROTKB|Q8IIJ0 - symbol:PF11_0184 "DNA mismatch repair ... 110 2.8e-08 2
UNIPROTKB|H0Y806 - symbol:MLH1 "DNA mismatch repair prote... 126 3.3e-08 1
ASPGD|ASPL0000056766 - symbol:AN0126 species:162425 "Emer... 136 4.8e-08 1
UNIPROTKB|Q5BH54 - symbol:AN0126.2 "DNA mismatch repair p... 136 4.8e-08 1
>UNIPROTKB|B7Z821 [details] [associations]
symbol:MLH1 "cDNA FLJ55289, highly similar to DNA mismatch
repair protein Mlh1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 UniGene:Hs.195364
HGNC:HGNC:7127 HOVERGEN:HBG006374 ChiTaRS:Mlh1 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 EMBL:AK302807
IPI:IPI01012620 SMR:B7Z821 STRING:B7Z821 Ensembl:ENST00000536378
Uniprot:B7Z821
Length = 460
Score = 231 (86.4 bits), Expect = 9.6e-38, Sum P(2) = 9.6e-38
Identities = 47/103 (45%), Positives = 62/103 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 64 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKSTT 123
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD+ EQKLD FL SK ++ Q
Sbjct: 124 SLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQ 166
Score = 202 (76.2 bits), Expect = 9.6e-38, Sum P(2) = 9.6e-38
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI +Q L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 256 RRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 315
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 316 EELFYQILIYDFANFGVLR 334
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 230 (86.0 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 44/93 (47%), Positives = 57/93 (61%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I++RVQ +E LLGSN+SR+++TQT LP +
Sbjct: 305 VNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTT 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL 98
Y++VRTD+ EQKLD FL
Sbjct: 365 GVASSSTSGSGDKVYAYQMVRTDSREQKLDAFL 397
Score = 209 (78.6 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 43/93 (46%), Positives = 60/93 (64%)
Query: 105 QRATSKQTSNKKYKRREI-KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQ 163
+ A+ K+ + Y RR I L+SV L+ EI ++ L E+ R SFVGC P L Q
Sbjct: 487 ENASGKEMTAACYPRRRIINLTSVLSLQEEISERCHETLREMLRNHSFVGCVNPQWALAQ 546
Query: 164 HETKLYIVNVTYVLEELFYQLMLHDFGNFGVFR 196
H+TKLY++N T + EELFYQ++++DF NFGV R
Sbjct: 547 HQTKLYLLNTTKLSEELFYQILIYDFANFGVLR 579
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 222 (83.2 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 51/113 (45%), Positives = 62/113 (54%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHED+IIE +Q +E LLGSN+SR ++TQT LP S
Sbjct: 303 VNVHPTKHEVHFLHEDSIIESIQKHIESKLLGSNSSRTYFTQTLLPGLSASASVAKASSS 362
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL-----SKYIADQRATSKQTS 113
+++VRTD+ QKLD FL S A QR T K +S
Sbjct: 363 SADSQERVYA------HQMVRTDSKAQKLDAFLQPSASSSSTAAQRKTEKTSS 409
Score = 213 (80.0 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR +KL+S+++LR +IE Q L E+ + SFVG +P L+QH+TKLY++N T +
Sbjct: 472 RRRIVKLTSIKELRDQIELQTHKGLQELLQNHSFVGSVSPQWTLVQHQTKLYLLNTTKLS 531
Query: 178 EELFYQLMLHDFGNFGVFR 196
+ELFYQ++++DFGNFGV R
Sbjct: 532 QELFYQILVYDFGNFGVLR 550
>UNIPROTKB|E9PCU2 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 GO:GO:0005524 GO:GO:0005634
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AC006583 KO:K08734 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 RefSeq:NP_001161089.1
UniGene:Hs.195364 DNASU:4292 GeneID:4292 KEGG:hsa:4292 CTD:4292
HGNC:HGNC:7127 ChiTaRS:Mlh1 GenomeRNAi:4292 NextBio:16893
IPI:IPI00924824 ProteinModelPortal:E9PCU2 SMR:E9PCU2 PRIDE:E9PCU2
Ensembl:ENST00000435176 UCSC:uc011ayc.2 ArrayExpress:E9PCU2
Bgee:E9PCU2 Uniprot:E9PCU2
Length = 658
Score = 231 (86.4 bits), Expect = 5.2e-37, Sum P(2) = 5.2e-37
Identities = 47/103 (45%), Positives = 62/103 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 207 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKSTT 266
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD+ EQKLD FL SK ++ Q
Sbjct: 267 SLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQ 309
Score = 202 (76.2 bits), Expect = 5.2e-37, Sum P(2) = 5.2e-37
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI +Q L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 399 RRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 458
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 459 EELFYQILIYDFANFGVLR 477
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 224 (83.9 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 45/93 (48%), Positives = 56/93 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQT LP
Sbjct: 305 VNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGAECSSSEVVKSAA 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL 98
+++VRTD+ EQKLD FL
Sbjct: 365 SSSTAAKGTSDKVYA-HQMVRTDSREQKLDAFL 396
Score = 211 (79.3 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
KRR I L+SV L+ EI Q L E+ R SFVGC +P L+QH TKLY++N T +
Sbjct: 498 KRRIINLTSVLTLQEEISNQSHESLQEMLRDHSFVGCVSPQWALVQHRTKLYLLNTTKLS 557
Query: 178 EELFYQLMLHDFGNFGVFR 196
+ELFYQ++++DF NFGV R
Sbjct: 558 QELFYQILIYDFANFGVLR 576
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 231 (86.4 bits), Expect = 5.9e-37, Sum P(2) = 5.9e-37
Identities = 47/103 (45%), Positives = 62/103 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 297 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKSTT 356
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD+ EQKLD FL SK ++ Q
Sbjct: 357 SLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQ 399
Score = 202 (76.2 bits), Expect = 5.9e-37, Sum P(2) = 5.9e-37
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI +Q L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 489 RRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 548
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 549 EELFYQILIYDFANFGVLR 567
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 231 (86.4 bits), Expect = 8.6e-37, Sum P(2) = 8.6e-37
Identities = 47/103 (45%), Positives = 62/103 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 305 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVKSTT 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD+ EQKLD FL SK ++ Q
Sbjct: 365 SLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQ 407
Score = 202 (76.2 bits), Expect = 8.6e-37, Sum P(2) = 8.6e-37
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI +Q L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 497 RRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 556
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 557 EELFYQILIYDFANFGVLR 575
>UNIPROTKB|I3LT92 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:CU993803
Ensembl:ENSSSCT00000027443 Uniprot:I3LT92
Length = 687
Score = 229 (85.7 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 50/103 (48%), Positives = 59/103 (57%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHED+I+ERVQ +E LLGSN SR ++TQT LP T
Sbjct: 235 VNVHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQTLLPGL-TGPSGEAVKSA 293
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
Y++VRTD EQKLD FL SK ++ Q
Sbjct: 294 ADVTPSSTGSGDKVYAYQMVRTDCREQKLDAFLQPASKSLSSQ 336
Score = 198 (74.8 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI ++ L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 428 RRRIINLTSVLTLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 487
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 488 EELFYQILIYDFANFGVLR 506
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 229 (85.7 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 43/93 (46%), Positives = 57/93 (61%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 305 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAVKSTT 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL 98
Y++VRTD+ +QKLD F+
Sbjct: 365 GIASSSTSGSGDKVHAYQMVRTDSRDQKLDAFM 397
Score = 199 (75.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI + L E+ R +FVGC P L QH+TKLY++N T +
Sbjct: 499 RRRIINLTSVLSLQEEINDRGHETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNTTKLS 558
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 559 EELFYQILIYDFANFGVLR 577
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 229 (85.7 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 43/93 (46%), Positives = 57/93 (61%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 305 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAVKSTT 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL 98
Y++VRTD+ +QKLD F+
Sbjct: 365 GIASSSTSGSGDKVHAYQMVRTDSRDQKLDAFM 397
Score = 199 (75.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI + L E+ R +FVGC P L QH+TKLY++N T +
Sbjct: 499 RRRIINLTSVLSLQEEINDRGHETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNTTKLS 558
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 559 EELFYQILIYDFANFGVLR 577
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 228 (85.3 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 47/103 (45%), Positives = 58/103 (56%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHED+I+ER+Q +E LLGSN SR ++TQT LP
Sbjct: 305 VNVHPTKHEVHFLHEDSILERLQQHIESRLLGSNASRTYFTQTLLPGLPGPSGEAVKSTA 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD EQKLD FL SK ++ Q
Sbjct: 365 SVTSSSTAGSGDRVYAHQMVRTDCREQKLDAFLQPVSKALSSQ 407
Score = 198 (74.8 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI ++ L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 499 RRRIINLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTRLS 558
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 559 EELFYQILVYDFANFGVLR 577
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 224 (83.9 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 48/103 (46%), Positives = 62/103 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFLHED+I+ERVQ +E LLGSN+SR+++TQT LP +
Sbjct: 305 VNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTT 364
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL---SKYIADQ 105
+++VRTD+ EQKLD FL SK ++ Q
Sbjct: 365 GATPSSTGSGDKVYA-HQMVRTDSREQKLDAFLQPMSKALSSQ 406
Score = 199 (75.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
+RR I L+SV L+ EI ++ L E+ SFVGC P L QH+TKLY++N T +
Sbjct: 498 RRRIINLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLS 557
Query: 178 EELFYQLMLHDFGNFGVFR 196
EELFYQ++++DF NFGV R
Sbjct: 558 EELFYQILIYDFANFGVLR 576
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 318 (117.0 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 74/199 (37%), Positives = 105/199 (52%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTKHEVHFL+++ I++ ++ +E LLGSN +R FY Q +LP
Sbjct: 307 VNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPG-----------AP 355
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFLSKYIADQRATSKQTSNKKY-------- 117
++VRTD++EQKLD+FL+ + S +S +
Sbjct: 356 DLDETQLADKTQRIYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSSSQEASRLPEESFR 415
Query: 118 -----KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVN 172
K RE++LSSV D+R +E+Q S QL + L +VGC L QHET+LY+ N
Sbjct: 416 VTAAKKSREVRLSSVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCN 475
Query: 173 VTYVLEELFYQLMLHDFGN 191
EELFYQ M+++F N
Sbjct: 476 TRSFSEELFYQRMIYEFQN 494
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 150 (57.9 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 123 KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPC--MCLIQHETKLYIVNVTYVLEEL 180
+L SVR+LR E+ ++ +L E+F +FVG + IQ KLY+V+ V E
Sbjct: 479 RLISVRELRAEVREEMHHELTEIFANHTFVGIVDERRRLAAIQGGVKLYLVDYGRVCYEY 538
Query: 181 FYQLMLHDFGNFGVFRFE 198
FYQL L DFGNFG RF+
Sbjct: 539 FYQLGLTDFGNFGTIRFD 556
Score = 126 (49.4 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 33/97 (34%), Positives = 43/97 (44%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLP----SFSTEXXXXX 61
VNVHPTK EV+FL+E II+ + + L +TSR F TQT LP S S +
Sbjct: 335 VNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTSRTFLTQTLLPGGTWSASDQQASSS 394
Query: 62 XXXXXXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFL 98
LVRTD + +K+ L
Sbjct: 395 TPSKTSGAASGARKTPARNESSLVRTDTNMRKITSML 431
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 144 (55.7 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 112 TSNKKYKRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIV 171
T K K ++++L+S++ L E + L E F FVGC L+Q KLY++
Sbjct: 611 TPRKTRKYKQVELTSIKTLISEFQSNVHDGLKEFFNDCVFVGCLDHSYALVQFGKKLYLI 670
Query: 172 NVTYVLEELFYQLMLHDFGNFGVFRFEGS 200
N+ + +ELFYQL L F +F +F S
Sbjct: 671 NLENITKELFYQLSLLRFSDFDSIKFSQS 699
Score = 121 (47.7 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTE 56
VN+HPTK EV LHE+ IIE +Q +++ L S+ S+ F TQ LP F +
Sbjct: 393 VNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFSTQILLPGFDQD 443
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 140 (54.3 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 120 REIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVLEE 179
RE S+ LR EI S L E+F+ +FVG LIQ T LY ++ + VL E
Sbjct: 498 REFHFESIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLRE 557
Query: 180 LFYQLMLHDFGNFGVFRFE 198
FYQ+ + FGN+G +R +
Sbjct: 558 FFYQISVFSFGNYGSYRLD 576
Score = 82 (33.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 35
VNVHPTK+ V FL ++ IIE +++ EK +
Sbjct: 307 VNVHPTKNSVIFLEKEEIIEEIRAYFEKVI 336
Score = 56 (24.8 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 82 YKLVRTDASEQKLDRFLSK 100
Y VRTDA E+K+D F+++
Sbjct: 400 YMEVRTDAKERKIDEFVTR 418
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 140 (54.3 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 120 REIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVLEE 179
RE S+ LR EI S L E+F+ +FVG LIQ T LY ++ + VL E
Sbjct: 498 REFHFESIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLRE 557
Query: 180 LFYQLMLHDFGNFGVFRFE 198
FYQ+ + FGN+G +R +
Sbjct: 558 FFYQISVFSFGNYGSYRLD 576
Score = 82 (33.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTL 35
VNVHPTK+ V FL ++ IIE +++ EK +
Sbjct: 307 VNVHPTKNSVIFLEKEEIIEEIRAYFEKVI 336
Score = 56 (24.8 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 82 YKLVRTDASEQKLDRFLSK 100
Y VRTDA E+K+D F+++
Sbjct: 400 YMEVRTDAKERKIDEFVTR 418
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 143 (55.4 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 35/117 (29%), Positives = 60/117 (51%)
Query: 91 EQKLDRFLSKYIADQRATSKQTSNKKY-----KRREIKLSSVRDLRGEIEKQKSSQLCEV 145
+QKL + IAD + S Y +R + L+S++ LR +++ +L ++
Sbjct: 473 KQKLGDYKVPSIADDEKNALPISKDGYIRVPKERVNVNLTSIKKLREKVDDSIHRELTDI 532
Query: 146 FRKLSFVGCATP--CMCLIQHETKLYIVNVTYVLEELFYQLMLHDFGNFGVFRFEGS 200
F L++VG + IQH+ KL++++ V ELFYQ+ L DF NFG + +
Sbjct: 533 FANLNYVGVVDEERRLAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGKINLQST 589
Score = 106 (42.4 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFST 55
VNVHPTK EV FL +D IIE++ + L L +TSR F K S ST
Sbjct: 305 VNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTF----KASSIST 350
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 83 KLVRTDASEQKLDRFLSKYIADQRATSKQTSNKKYKRREIKLSSVRDLRGEIEK 136
KLVR DAS+ K+ FLS + Q+ + +S K+ + E K+++V + E EK
Sbjct: 398 KLVRIDASQAKITSFLS---SSQQFNFEGSSTKR-QLSEPKVTNVSHSQ-EAEK 446
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 212 (79.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 60/199 (30%), Positives = 93/199 (46%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VN+HPTK EV L+++ IIE +++ +E+ L+ SNT+R+F TQ S +
Sbjct: 318 VNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNLSGIAQANPQKDKVS 377
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQ--KLDRFLSKYIA--DQRATSKQTSNKKYKRRE 121
++VRTD +L + + +++ N RR
Sbjct: 378 EASMGSGTKSQKIPVS-QMVRTDPRNPSGRLHTYWHGQSSNLEKKFDLVSVRNVVRSRRN 436
Query: 122 IK----LSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVL 177
K LSS +L EI+ L ++ + ++VG A LIQH T+LY+VNV +
Sbjct: 437 QKDAGDLSSRHELLVEIDSSFHPGLLDIVKNCTYVGLADEAFALIQHNTRLYLVNVVNIS 496
Query: 178 EELFYQLMLHDFGNFGVFR 196
+EL YQ L FGNF +
Sbjct: 497 KELMYQQALCRFGNFNAIQ 515
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 129 (50.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 110 KQTSNKKYKRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPC--MCLIQHETK 167
K +N K+ ++ L S+ L+ ++ L +F +VG P +C Q++ K
Sbjct: 473 KIETNHSRKQVQVNLDSIASLKNDLTLIIDKPLTNIFNNAVYVGIVDPWKRLCCFQYDVK 532
Query: 168 LYIVNVTYVLEELFYQLMLHDFGNFGVFRFE 198
L++ + +L E +YQ+ LH+F NFG F+
Sbjct: 533 LFLCDYAAMLLEFYYQIGLHEFCNFGEIEFD 563
Score = 109 (43.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQT 48
VNVHPTK EV FL+ED II+ + S + L +TSR F TQ+
Sbjct: 318 VNVHPTKREVRFLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQS 360
Score = 51 (23.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 83 KLVRTDASEQKLDRFLSKYIADQRATSKQTSNKKYKRREIK---LSSVRDLRGEIEKQKS 139
K+VR DAS+ KL F+ + + + + Y I+ +++ +D+ E EK+++
Sbjct: 393 KMVRVDASQSKLSSFMQQQPSQNYHDVMRKEFEYYSSSIIEDDTINTEQDIPEENEKEEA 452
Score = 39 (18.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 18 LHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSF 53
L E + + +Q L+K + RV +Q+KL SF
Sbjct: 372 LEEHQLPKTLQPSLKKYRQENKMVRVDASQSKLSSF 407
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 194 (73.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 57/200 (28%), Positives = 93/200 (46%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
+N+HPTK EV L+++ IIE +QS +E L +N +R F Q K+ +
Sbjct: 329 INIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQ-KV-EYIQSTLTSQKSDS 386
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQ--KLDRFLS---KYIADQRATSKQTSNKKYKRR 120
K+VRTD+S+ +L FL + + D+ ++ + +RR
Sbjct: 387 PVSQKPSGQKTQKVPVNKMVRTDSSDPAGRLHAFLQPKPQSLPDKVSSLSVVRSSVRQRR 446
Query: 121 EIK----LSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYV 176
K LSSV++L ++ + E R ++VG A L+Q+ T LY+ NV +
Sbjct: 447 NPKETADLSSVQELIAGVDSCCHPGMLETVRNCTYVGMADDVFALVQYNTHLYLANVVNL 506
Query: 177 LEELFYQLMLHDFGNFGVFR 196
+EL YQ L F +F +
Sbjct: 507 SKELMYQQTLRRFAHFNAIQ 526
>UNIPROTKB|E7EUC9 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI01008784 ProteinModelPortal:E7EUC9 SMR:E7EUC9
Ensembl:ENST00000441265 ArrayExpress:E7EUC9 Bgee:E7EUC9
Uniprot:E7EUC9
Length = 105
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQ 47
VNVHPTKHEVHFLHE++I+ERVQ +E LLGSN+SR+++TQ
Sbjct: 64 VNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 105
>UNIPROTKB|Q1RMN2 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0051257 "spindle midzone
assembly involved in meiosis" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0045950 "negative regulation of mitotic
recombination" evidence=IEA] [GO:0045190 "isotype switching"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0001673 "male germ
cell nucleus" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 GO:GO:0005524 GO:GO:0008630
GO:GO:0048477 GO:GO:0007283 GO:GO:0016887 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 GO:GO:0045190 GO:GO:0007131
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
PANTHER:PTHR10073 HOGENOM:HOG000176000 OrthoDB:EOG43N7C7
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:DAAA02053630 EMBL:DAAA02053631
UniGene:Bt.30133 EMBL:BC114810 IPI:IPI00838277 STRING:Q1RMN2
Ensembl:ENSBTAT00000048965 HOVERGEN:HBG083452 InParanoid:Q1RMN2
Uniprot:Q1RMN2
Length = 233
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 150 SFVGCATPCMCLIQHETKLYIVNVTYVLEELFYQLMLHDFGNFGVFR 196
SFVGC P L QH+TKLY++N T + EELFYQ++++DF NFGV R
Sbjct: 6 SFVGCVNPQWALAQHQTKLYLLNTTRLSEELFYQILVYDFANFGVLR 52
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 111 (44.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 3 QPPVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYT 46
Q VN+HPTK EV F+H+ +IE ++ +E LL SN SR F T
Sbjct: 347 QVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKLLASNDSRTFAT 390
Score = 109 (43.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 125 SSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVTYVLEELFYQL 184
++V L E E L ++ R+ +FVG A + L+QH T+LY+V+V + +LFYQL
Sbjct: 673 AAVLSLLAEAEADCHGSLADLLREHTFVGIADGSLALLQHGTRLYLVDVGALSADLFYQL 732
Query: 185 ML 186
L
Sbjct: 733 AL 734
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 158 (60.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 2 DQPPVNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXX 61
+Q VNVHP+K VHFL++ I + L + L ++T R + Q +PS S
Sbjct: 312 EQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQAMIPSISNTKNAES 371
Query: 62 XXXXXXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFLSKYI------ADQRATSKQTSN- 114
+ +++ S+ L R + Y D ++K +N
Sbjct: 372 SSQKAVRTYENYLVRTDPRE-RSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATND 430
Query: 115 -KKYKRREI-------KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVG--CATPCMCLIQH 164
K + EI L S++ L+ ++ + + +VG C T + +QH
Sbjct: 431 IKDLQTEEIVEEGNSIDLESIKSLQKQVINSMHVLATNILTEHKYVGLVCPTRRIAAVQH 490
Query: 165 ETKLYIVNVTYVLEELFYQLMLHDFGNFGVFRFE 198
LY+V+ + LFYQ+ L +FGN+G F E
Sbjct: 491 NIGLYVVDYGKLSYHLFYQICLTEFGNYGEFVLE 524
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 107 (42.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 110 KQTSNKKYKRR---EI-KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHE 165
K SN Y R+ E +++S++ LR E+++ +L E + +VG LIQ++
Sbjct: 557 KHISNICYDRKLPSECDEITSIKKLRKICEEKEKKELTECLKNSIYVGPVDNMHSLIQYK 616
Query: 166 TKLYIVNVTYVLEELFYQLMLHDFGNFGVFRFE 198
KL ++ + +++E+ YQ +L+ G F+F+
Sbjct: 617 EKLLMIKMPLIIKEIIYQSILNRIGKIPPFKFD 649
Score = 96 (38.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQT 48
+NVHPTK EVHFL++D I + +E+ L N R + T
Sbjct: 398 INVHPTKKEVHFLYQDEIATLISKKIEQVLKNINNMRSYNAPT 440
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 146 (56.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGC--ATPCMCLIQHETKLYIVNVTY 175
+R E+ L+S++ L+ E+++ +L VF +++VG AT + IQH KL++V+
Sbjct: 509 ERTEVNLTSIKTLKQEVDEDMHKELTSVFADMTYVGVVDATRRLASIQHGLKLFLVDYGS 568
Query: 176 VLEELFYQLMLHDFGNFG 193
+ ELFYQ+ L DF NFG
Sbjct: 569 LCNELFYQIGLTDFANFG 586
Score = 131 (51.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/137 (27%), Positives = 57/137 (41%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTK EV FL+E+ +IER+ ++L + L +TSR F + P
Sbjct: 349 VNVHPTKREVRFLYEEELIERIGNLLHERLSQLDTSRTFKPGSLTPG--KHSSTVSSAFR 406
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFLSKYIADQRATSKQTSNKKYKRREIKLS 125
LVRTD S+ K+ ++ A Q +TS S K+ S
Sbjct: 407 QSATPASTQPKAKRAENMLVRTDGSQAKITNYVR---ASQSSTSSSFSTSLRKKSHAAAS 463
Query: 126 SVRDLRGEIEKQKSSQL 142
GE + ++ +
Sbjct: 464 DELGSIGEDSQDTATSM 480
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 110 (43.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 110 KQTSNKKYKRR---EI-KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHE 165
K SNK Y R+ E ++SS++ L+ E+++ +L E + +VG LIQ++
Sbjct: 693 KHISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYK 752
Query: 166 TKLYIVNVTYVLEELFYQLMLHDFGNFGVFRFE 198
KL ++ + +++E+ YQ +L+ G F F+
Sbjct: 753 EKLLLIKMPLIIKEVTYQSILNRLGKIPPFEFD 785
Score = 82 (33.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF-YTQTKL 50
+NVHPTK EVHFL+++ I + +++ L + R F T KL
Sbjct: 501 INVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTFNITGEKL 546
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 110 (43.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 110 KQTSNKKYKRR---EI-KLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHE 165
K SNK Y R+ E ++SS++ L+ E+++ +L E + +VG LIQ++
Sbjct: 693 KHISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYK 752
Query: 166 TKLYIVNVTYVLEELFYQLMLHDFGNFGVFRFE 198
KL ++ + +++E+ YQ +L+ G F F+
Sbjct: 753 EKLLLIKMPLIIKEVTYQSILNRLGKIPPFEFD 785
Score = 82 (33.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVF-YTQTKL 50
+NVHPTK EVHFL+++ I + +++ L + R F T KL
Sbjct: 501 INVHPTKKEVHFLYQEEISMLIGKKIQEFLKSFHNMRTFNITGEKL 546
>UNIPROTKB|H0Y806 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 GO:GO:0005524
GO:GO:0006298 GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1 ProteinModelPortal:H0Y806
Ensembl:ENST00000413740 Bgee:H0Y806 Uniprot:H0Y806
Length = 114
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 118 KRREIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCATPCMCLIQHETKLYIVNVT 174
+RR I L+SV L+ EI +Q L E+ SFVGC P L QH+TKLY++N T
Sbjct: 38 RRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTT 94
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 51/165 (30%), Positives = 70/165 (42%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTK EV+FL+ED II+ + + + L ++SR F TQT LPS T
Sbjct: 335 VNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDA 394
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFLSKYIADQ-RATSK---QTSNKK----- 116
LVRTD+ +K+ LS + AT Q N +
Sbjct: 395 DAAPKTPAPTKKPYEN-SLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDD 453
Query: 117 ---YKR--RE---IKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVG 153
Y RE I L+SV++LR + L E ++VG
Sbjct: 454 GLIYTTTDREPLKIALTSVKNLRAAVRSSMHQSLTETIASHTYVG 498
Score = 117 (46.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 121 EIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCA--TPCMCLIQHETKLYIVNVTYVLE 178
+I L+SV++LR + L E ++VG + +Q KLY+++
Sbjct: 466 KIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFCA 525
Query: 179 ELFYQLMLHDFGNFGVFRFE 198
E FYQL L DFGNFG + E
Sbjct: 526 EFFYQLGLTDFGNFGTIQLE 545
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 51/165 (30%), Positives = 70/165 (42%)
Query: 6 VNVHPTKHEVHFLHEDTIIERVQSMLEKTLLGSNTSRVFYTQTKLPSFSTEXXXXXXXXX 65
VNVHPTK EV+FL+ED II+ + + + L ++SR F TQT LPS T
Sbjct: 335 VNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDA 394
Query: 66 XXXXXXXXXXXXXXXXYKLVRTDASEQKLDRFLSKYIADQ-RATSK---QTSNKK----- 116
LVRTD+ +K+ LS + AT Q N +
Sbjct: 395 DAAPKTPAPTKKPYEN-SLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDD 453
Query: 117 ---YKR--RE---IKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVG 153
Y RE I L+SV++LR + L E ++VG
Sbjct: 454 GLIYTTTDREPLKIALTSVKNLRAAVRSSMHQSLTETIASHTYVG 498
Score = 117 (46.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 121 EIKLSSVRDLRGEIEKQKSSQLCEVFRKLSFVGCA--TPCMCLIQHETKLYIVNVTYVLE 178
+I L+SV++LR + L E ++VG + +Q KLY+++
Sbjct: 466 KIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFCA 525
Query: 179 ELFYQLMLHDFGNFGVFRFE 198
E FYQL L DFGNFG + E
Sbjct: 526 EFFYQLGLTDFGNFGTIQLE 545
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 202 177 0.00084 109 3 11 22 0.38 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 564 (60 KB)
Total size of DFA: 140 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.61u 0.07s 16.68t Elapsed: 00:00:03
Total cpu time: 16.62u 0.08s 16.70t Elapsed: 00:00:03
Start: Thu Aug 15 10:57:53 2013 End: Thu Aug 15 10:57:56 2013