Query psy196
Match_columns 364
No_of_seqs 161 out of 710
Neff 4.4
Searched_HMMs 46136
Date Fri Aug 16 20:39:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy196.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/196hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1557|consensus 100.0 2E-161 5E-166 1153.2 32.8 363 1-364 1-363 (363)
2 PLN02455 fructose-bisphosphate 100.0 2E-160 5E-165 1165.5 35.4 358 5-364 1-358 (358)
3 PTZ00019 fructose-bisphosphate 100.0 1E-158 3E-163 1153.8 34.7 352 11-364 2-355 (355)
4 PLN02227 fructose-bisphosphate 100.0 5E-158 1E-162 1158.6 34.3 351 9-364 49-399 (399)
5 PLN02425 probable fructose-bis 100.0 1E-157 2E-162 1155.4 34.7 358 2-364 33-390 (390)
6 cd00948 FBP_aldolase_I_a Fruct 100.0 7E-154 2E-158 1113.2 32.6 329 14-343 2-330 (330)
7 PF00274 Glycolytic: Fructose- 100.0 6E-148 1E-152 1085.7 29.0 348 15-364 1-348 (348)
8 cd00344 FBP_aldolase_I Fructos 100.0 9E-139 2E-143 1011.9 32.1 327 14-340 2-328 (328)
9 COG3588 Fructose-1,6-bisphosph 100.0 4E-126 8E-131 907.2 22.2 329 14-344 3-331 (332)
10 PRK05377 fructose-1,6-bisphosp 100.0 4.2E-89 9.2E-94 651.8 23.4 263 22-332 8-283 (296)
11 cd00949 FBP_aldolase_I_bact Fr 100.0 7.1E-85 1.5E-89 621.9 22.7 261 22-333 5-281 (292)
12 PRK12399 tagatose 1,6-diphosph 97.2 0.14 3E-06 51.5 23.0 276 24-335 12-305 (324)
13 PRK12858 tagatose 1,6-diphosph 97.1 0.087 1.9E-06 53.1 20.4 273 30-335 22-306 (340)
14 PRK04161 tagatose 1,6-diphosph 97.1 0.14 3E-06 51.7 20.9 279 24-335 14-307 (329)
15 TIGR01232 lacD tagatose 1,6-di 96.8 0.36 7.8E-06 48.7 21.9 278 24-335 13-306 (325)
16 PRK07226 fructose-bisphosphate 88.1 12 0.00026 36.0 13.1 156 129-333 93-252 (267)
17 cd00958 DhnA Class I fructose- 86.2 13 0.00027 34.6 11.7 149 133-329 80-231 (235)
18 COG3684 LacD Tagatose-1,6-bisp 44.7 2.3E+02 0.0051 28.6 10.3 179 25-224 15-202 (306)
19 PF01261 AP_endonuc_2: Xylose 44.6 2.1E+02 0.0045 24.8 9.3 65 128-196 70-139 (213)
20 TIGR01949 AroFGH_arch predicte 40.9 3.3E+02 0.0071 26.0 12.2 150 133-332 94-247 (258)
21 KOG0742|consensus 38.4 22 0.00048 38.0 2.3 69 4-72 326-397 (630)
22 PF01791 DeoC: DeoC/LacD famil 37.2 2.1E+02 0.0046 26.7 8.5 150 132-307 79-234 (236)
23 PF09863 DUF2090: Uncharacteri 35.9 4.9E+02 0.011 26.6 12.2 189 78-320 89-288 (311)
24 PF08742 C8: C8 domain; Inter 35.8 28 0.00061 26.8 2.0 18 168-185 47-64 (74)
25 TIGR01227 hutG formimidoylglut 33.4 1.7E+02 0.0038 28.7 7.6 88 103-202 38-126 (307)
26 PF06169 DUF982: Protein of un 33.2 80 0.0017 25.1 4.3 52 276-337 19-72 (76)
27 smart00832 C8 C8 domain. This 32.8 33 0.00071 27.2 2.0 17 168-184 49-65 (76)
28 KOG4266|consensus 31.2 24 0.00052 39.2 1.3 88 192-301 641-761 (1033)
29 PRK06552 keto-hydroxyglutarate 30.9 1.7E+02 0.0037 27.6 6.8 54 222-285 68-127 (213)
30 KOG1749|consensus 30.5 29 0.00063 31.0 1.5 84 10-109 25-120 (143)
31 PF10058 DUF2296: Predicted in 29.3 7.3 0.00016 29.6 -2.1 20 173-192 20-43 (54)
32 PRK10528 multifunctional acyl- 28.4 1.3E+02 0.0029 26.9 5.5 44 174-218 134-188 (191)
33 PRK13773 formimidoylglutamase; 27.2 2.7E+02 0.0058 27.8 7.8 85 103-202 47-134 (324)
34 PRK13776 formimidoylglutamase; 27.1 3.6E+02 0.0078 26.8 8.7 88 103-202 45-132 (318)
35 COG0367 AsnB Asparagine syntha 26.0 1.4E+02 0.003 32.1 5.9 44 246-289 212-255 (542)
36 PF00733 Asn_synthase: Asparag 25.3 1.2E+02 0.0026 27.4 4.6 33 254-289 7-39 (255)
37 PF04015 DUF362: Domain of unk 24.8 64 0.0014 29.4 2.7 47 228-276 3-49 (206)
38 COG3660 Predicted nucleoside-d 24.4 1.9E+02 0.0041 29.4 6.0 84 236-320 133-236 (329)
39 PRK15410 DgsA anti-repressor M 24.4 76 0.0016 31.4 3.3 69 4-87 27-100 (260)
40 PF06167 Peptidase_M90: Glucos 24.2 62 0.0014 31.6 2.7 70 3-87 36-110 (253)
41 PRK13775 formimidoylglutamase; 23.8 3.1E+02 0.0068 27.4 7.6 85 103-202 49-138 (328)
42 PF06508 QueC: Queuosine biosy 23.4 60 0.0013 30.4 2.3 33 268-305 3-36 (209)
43 KOG2311|consensus 23.3 46 0.001 36.3 1.7 68 61-135 149-217 (679)
44 PRK10696 tRNA 2-thiocytidine b 23.2 2.2E+02 0.0048 27.1 6.1 20 202-221 5-24 (258)
45 TIGR01963 PHB_DH 3-hydroxybuty 23.1 3.4E+02 0.0073 24.3 7.1 34 243-277 220-254 (255)
46 TIGR00676 fadh2 5,10-methylene 22.3 7.1E+02 0.015 24.0 11.8 168 5-196 6-197 (272)
47 cd01991 Asn_Synthase_B_C The C 21.8 1.4E+02 0.0031 27.6 4.5 20 258-277 9-28 (269)
48 COG5400 Uncharacterized protei 21.2 78 0.0017 29.9 2.5 104 16-138 46-151 (205)
49 PHA02513 V1 structural protein 20.9 93 0.002 27.6 2.8 30 311-343 35-64 (135)
50 PRK13772 formimidoylglutamase; 20.7 3E+02 0.0066 27.3 6.8 88 103-202 44-131 (314)
51 cd00635 PLPDE_III_YBL036c_like 20.5 6.7E+02 0.015 23.0 8.8 86 103-200 117-204 (222)
52 COG0285 FolC Folylpolyglutamat 20.5 1.7E+02 0.0036 30.9 5.0 64 268-333 331-396 (427)
No 1
>KOG1557|consensus
Probab=100.00 E-value=2.5e-161 Score=1153.18 Aligned_cols=363 Identities=68% Similarity=1.069 Sum_probs=359.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeec
Q psy196 1 MPTHFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILF 80 (364)
Q Consensus 1 ~~~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILf 80 (364)
|+++++.++.++++||.+||++|++|||||||||||+|||+|||++|||||||+|||+||++|||| |++++||||||||
T Consensus 1 m~~~~~~~~~~~~~EL~~~A~~I~~pGkGILAaDES~~T~gkRl~sIgveNtE~NRr~yRelLftt-pg~~~~IsGvILf 79 (363)
T KOG1557|consen 1 MSHYFPFLSKAQKDELIKIAKKIVTPGKGILAADESTGTIGKRLASIGVENTEENRRAYRELLFTT-PGLNQYISGVILF 79 (363)
T ss_pred CCccccccCHHHHHHHHHHHHHhcCCCCceEeecCCcchHHHHHHhcCCcccHHHHHHHHHHhhcC-CChhhccceEEee
Confidence 889999999999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred cccccccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCcc
Q psy196 81 HDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPS 160 (364)
Q Consensus 81 eETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps 160 (364)
||||||+++||+||+|+|+++|||||||||||++||+|+.+|++|||||||.+||++||+.||||||||||++|++++||
T Consensus 80 eETlyQkt~dGkpf~~~L~~~givpGIKvDKG~vplaGt~~E~ttqGLD~L~~Rca~y~k~Ga~FAKWR~vlki~~~~PS 159 (363)
T KOG1557|consen 80 EETLYQKTDDGKPFVDLLKEKGIVPGIKVDKGLVPLAGTNGETTTQGLDGLAERCAQYYKDGARFAKWRAVLKIGDGTPS 159 (363)
T ss_pred eehheeeCCCCCCHHHHHHhcCCccceEecCCcccccccCCcceeechhhHHHHHHHHHHcCCchhheeEEEEecCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCcc
Q psy196 161 ALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASC 240 (364)
Q Consensus 161 ~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~ 240 (364)
.+||.|||+.|||||+|||+||||||||||||.||||||+||++|||+||++||++|++||||||||||||||||||.+|
T Consensus 160 ~lai~EnA~~LARYA~IcQ~nGLVPIVEPEil~dGdHdi~r~~~VtE~Vla~vykaL~~hhV~lEGtLLKPnMVTpG~~s 239 (363)
T KOG1557|consen 160 ALAIKENANGLARYASICQQNGLVPIVEPEILPDGDHDIKRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTPGAES 239 (363)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcccccccccccCCcccHHHHHHHHHHHHHHHHHHhhhcceeeeceecccccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCC
Q psy196 241 SEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGN 320 (364)
Q Consensus 241 ~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~n 320 (364)
+.|++||+||.+||++|+|||||+|||||||||||||||||.||||||++++++||.||||||||||+|+|++|+||+||
T Consensus 240 ~~K~tpe~iA~~TvtaLrrtVP~AVPGI~FLSGgqseeeAt~nLnAiN~~~~~kpW~LtFSygRALq~s~L~aW~Gk~en 319 (363)
T KOG1557|consen 240 TEKYTPEQIALATVTALRRTVPAAVPGIVFLSGGQSEEEATLNLNAINQEPGPKPWSLTFSYGRALQASVLKAWGGKDEN 319 (363)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCCceEEEecCCccHhhhhcchHHhhcCCCCCCceeeehHHHHHHHHHHHHhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 321 VLAGQNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 321 v~~aQ~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
+++||++|++||++|+.|++|+|.++.+.+.++.+||||++|+|
T Consensus 320 i~~aq~~~l~ra~an~~a~~Gky~~~~~~~~aa~esl~v~~~~y 363 (363)
T KOG1557|consen 320 IAAAQEALLKRAKANSLAALGKYTGQASGGAAASESLFVANYKY 363 (363)
T ss_pred HHHHHHHHHHHHhhcchhhccccccccccccchhhheeeccccC
Confidence 99999999999999999999999998876667889999999998
No 2
>PLN02455 fructose-bisphosphate aldolase
Probab=100.00 E-value=2.4e-160 Score=1165.46 Aligned_cols=358 Identities=58% Similarity=0.912 Sum_probs=348.3
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccc
Q psy196 5 FNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTL 84 (364)
Q Consensus 5 ~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl 84 (364)
|+..+.++++||.+||++|++|||||||||||+|||+|||++|||||||||||.||++|||| |++++||||||||||||
T Consensus 1 ~~~~~~~~~~eL~~tA~~iva~GKGiLAADES~gT~gKRl~~iGVente~nRr~yR~lLftt-p~~~~~IsGvILfeETl 79 (358)
T PLN02455 1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENVESNRQALRELLFTA-PGALQYLSGVILFEETL 79 (358)
T ss_pred CCcccHHHHHHHHHHHHHHhCCCCeeEEeccCCCchhhHHHhcCCCCchHHHHHHHHhhccC-CcccccEEEEEcchHhc
Confidence 45677899999999999999999999999999999999999999999999999999999999 57799999999999999
Q ss_pred cccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHH
Q psy196 85 YEKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAI 164 (364)
Q Consensus 85 ~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI 164 (364)
+|+++||+||+|+|+++|||||||||||++|++|+++|++|+|||||++||++||++|||||||||||+|++++||..||
T Consensus 80 ~Q~~~dG~p~~~~L~~~GIvPGIKVDkGl~~l~g~~ge~~t~GLDgL~~R~~~y~~~GarFAKWRsVikI~~~~PS~~ai 159 (358)
T PLN02455 80 YQKTSDGKPFVDVLKENGVLPGIKVDKGTVELAGTNGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPTEPSELAI 159 (358)
T ss_pred cccccCCcCHHHHHHHCCCeeeEEecCCccccCCCCCCccCcchHHHHHHHHHHHhcCCceeeceeeeecCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCC
Q psy196 165 LENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKY 244 (364)
Q Consensus 165 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~ 244 (364)
.+||++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||++|+.+
T Consensus 160 ~~na~~LArYA~icQ~~GlVPIVEPEvL~dGdH~i~~c~~Vte~Vl~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~- 238 (358)
T PLN02455 160 QENAQGLARYAIICQENGLVPIVEPEILVDGSHDIKKCAAVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSDSPKV- 238 (358)
T ss_pred HHHHHHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCcccCcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred ChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHH
Q psy196 245 APSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAG 324 (364)
Q Consensus 245 ~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~a 324 (364)
+|+|||++||+||+||||++||||+|||||||+||||.||||||+++.++||.||||||||||+|+||+|+||++|+++|
T Consensus 239 s~e~vA~~Tv~~l~rtVP~avpGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~Gk~eNv~aa 318 (358)
T PLN02455 239 SPEVIAEYTVRALQRTVPPAVPGIVFLSGGQSEEEATLNLNAMNKLKTLKPWTLSFSFGRALQQSTLKAWAGKKENVAKA 318 (358)
T ss_pred CHHHHHHHHHHHHHhhCCccCCcceecCCCCcHHHHHHHHHHHhcCCCCCCceeccchhHhhCHHHHHHcCCChhhHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 325 QNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 325 Q~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
|++|++||++||+|++|+|.+++..+.++.+||||++|+|
T Consensus 319 Q~~l~~ra~~N~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 358 (358)
T PLN02455 319 QAAFLVRCKANSEATLGKYKGDAAGGEGASESLHVKDYKY 358 (358)
T ss_pred HHHHHHHHHhcchhhcCCCCCCCCcccccccceeeccccC
Confidence 9999999999999999999987743446679999999998
No 3
>PTZ00019 fructose-bisphosphate aldolase; Provisional
Probab=100.00 E-value=1.2e-158 Score=1153.83 Aligned_cols=352 Identities=61% Similarity=0.963 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccC
Q psy196 11 ELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADD 90 (364)
Q Consensus 11 ~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~ 90 (364)
++++||.+||++|++|||||||||||+|||+|||++|||||||||||+||++|||| |++++||||||||||||+|+++|
T Consensus 2 ~~~~eL~~tA~~i~~~GKGilAADES~gT~~Krl~~iGvente~nrr~~R~llftt-p~~~~~IsGvILfeETl~q~~~d 80 (355)
T PTZ00019 2 EYAKELAETAKKIAAPGKGILAADESTGTIKKRFDPIGLENTEENRRAYRELLFTT-EGLEQYISGVILFEETVYQKAPS 80 (355)
T ss_pred cHHHHHHHHHHHHhCCCCeEEEeccCCCchhHHHHHcCCCCchHHHHHHHHhhccC-cchhhceEEEEcchHhccccccC
Confidence 47889999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred CcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecC--CCCccHHHHHHHH
Q psy196 91 GTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIG--DHTPSALAILENA 168 (364)
Q Consensus 91 G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~--~~~Ps~~aI~~na 168 (364)
|+||+|+|+++|||||||||||++|++|+++|++|+|||+|++||++||++|||||||||||+|+ +++||..||.+|+
T Consensus 81 G~p~~~~L~~~GIvPgIKVDkGl~~l~G~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~g~PS~~aI~~na 160 (355)
T PTZ00019 81 GKTFVELLKEKGIVPGIKVDKGLVTLPGTDGETSTQGLDGLAERAKKYYKAGARFAKWRAVLKIDPAKGKPSELAIQENA 160 (355)
T ss_pred CCChHHHHHHCCCeeeEEcCCCccCCCCCCCCccCcChHHHHHHHHHHHhcCCceeeeeeeeeecCCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 8899999999999
Q ss_pred HHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHH
Q psy196 169 NVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSD 248 (364)
Q Consensus 169 ~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~e 248 (364)
+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||.+|+.+++|++
T Consensus 161 ~~LaryA~icq~~GLVPIVEPEVlidG~H~i~~c~~vte~Vl~~v~~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~s~e~ 240 (355)
T PTZ00019 161 WTLARYAAICQENGLVPIVEPEILIDGSHSIEVCQKVTEKVLAEVFKALNDHGVLLEGCLLKPNMVTPGSDCGVKATPQE 240 (355)
T ss_pred HHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeecCceeccccccCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHH
Q psy196 249 IALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNEL 328 (364)
Q Consensus 249 vA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~ 328 (364)
||++||+||+||||++||||+|||||||+||||.||||||+++.++||.||||||||||+|+||+|+||++|+++||++|
T Consensus 241 vA~~Tv~~l~rtVP~avPGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~Gk~env~aaQ~~~ 320 (355)
T PTZ00019 241 VAFYTVRTLSRTVPPALPGVMFLSGGQSEEEASLNLNAMNKLTLPRPWALSFSYGRALQSSALKTWKGKDENVAAAQKAL 320 (355)
T ss_pred HHHHHHHHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCceeccchhHhhCHHHHHHcCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred HHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 329 LARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 329 ~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
++|||+||+|++|+|.++++ +.++.+||||++|.|
T Consensus 321 ~~rA~~N~~A~~G~y~~~~~-~~~~~~sl~~~~~~y 355 (355)
T PTZ00019 321 LHRAKANSLAQLGKYKGGDG-GAAASESLYVKDYKY 355 (355)
T ss_pred HHHHHhccHHhcCCCCCCCC-cccccccceeccccC
Confidence 99999999999999998775 345679999999998
No 4
>PLN02227 fructose-bisphosphate aldolase I
Probab=100.00 E-value=5.1e-158 Score=1158.55 Aligned_cols=351 Identities=51% Similarity=0.811 Sum_probs=343.8
Q ss_pred CHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccc
Q psy196 9 SPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKA 88 (364)
Q Consensus 9 ~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~ 88 (364)
+.++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||++|||| |++++||||||||||||+|++
T Consensus 49 ~~~~~~eL~~tA~~ivapGKGIlAaDES~gT~gKRl~~iGVenteenRr~yR~lLftt-p~~~~~IsGvILFeETl~Q~~ 127 (399)
T PLN02227 49 ASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSA-PGLGQYISGAILFEETLYQST 127 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCceeeeccCcChhHHHHHHcCCCCchHHHHHHHHhcccC-cchhcceEEEEcchhhccCcC
Confidence 7789999999999999999999999999999999999999999999999999999999 678999999999999999999
Q ss_pred cCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHH
Q psy196 89 DDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENA 168 (364)
Q Consensus 89 ~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na 168 (364)
+||+||+|+||++|||||||||||++|++|.++|++|+|||||++||++||++|||||||||||+|+++ ||+.+|++||
T Consensus 128 ~dG~pf~d~L~~~GIVPGIKVDKGl~~l~g~~~e~~tqGLDgL~~R~~~Y~~~GarFAKWRsVikI~~~-PS~~aI~~na 206 (399)
T PLN02227 128 TDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAA 206 (399)
T ss_pred cCCcCHHHHHHHCCCeeeEEcCCCcccCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCC-CCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999976 9999999999
Q ss_pred HHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHH
Q psy196 169 NVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSD 248 (364)
Q Consensus 169 ~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~e 248 (364)
+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||++|+.+++|++
T Consensus 207 ~~LArYA~icQ~~GLVPIVEPEVliDGdH~ie~c~~Vte~VL~~vfkaL~~h~V~lEG~LLKPnMV~pG~~~~~~~s~e~ 286 (399)
T PLN02227 207 WGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQ 286 (399)
T ss_pred HHHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceeccceeccCccCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHH
Q psy196 249 IALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNEL 328 (364)
Q Consensus 249 vA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~ 328 (364)
||++||+||+||||++||||+|||||||+||||.||||||++ ++||.||||||||||+|+||+|+||++|+++||++|
T Consensus 287 VA~~Tv~~L~rtVP~AVPGI~FLSGGQSeeeAt~nLnAmN~~--~~PW~LsFSygRALQ~s~Lk~W~Gk~eNv~aAQ~al 364 (399)
T PLN02227 287 VASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQA--PNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDIL 364 (399)
T ss_pred HHHHHHHHHHhcCCCCCCeeeecCCCCcHHHHHHHHHHhhcC--CCCceeccchHHhhCHHHHHHcCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 579999999999999999999999999999999999
Q ss_pred HHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 329 LARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 329 ~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
++|||+||+|++|+|.++++ +.++.+||||++|+|
T Consensus 365 ~~RAk~Ns~A~~G~y~~~~~-~~~~~~sl~~~~~~y 399 (399)
T PLN02227 365 LARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399 (399)
T ss_pred HHHHHHccHHhcCCCCCCCC-cccccccceeccccC
Confidence 99999999999999998876 446679999999998
No 5
>PLN02425 probable fructose-bisphosphate aldolase
Probab=100.00 E-value=1e-157 Score=1155.36 Aligned_cols=358 Identities=53% Similarity=0.829 Sum_probs=349.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeecc
Q psy196 2 PTHFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFH 81 (364)
Q Consensus 2 ~~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfe 81 (364)
+..||+++.++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||++|||| |++++|||||||||
T Consensus 33 ~~~~~~~~~~~~~eL~~tA~~i~apGKGIlA~DES~gT~~Krl~~iGVente~nrr~yR~lLftt-p~~~~~IsGvILFe 111 (390)
T PLN02425 33 RVSFRIRAGSYSDELVQTAKSVASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTT-PGLGEYISGAILFE 111 (390)
T ss_pred ccccccccHHHHHHHHHHHHHHhCCCCceEeeccccCchhHHHHHcCCCCchhhhHHHHhhhccC-cchhhceEEEEcch
Confidence 35689999999999999999999999999999999999999999999999999999999999999 57899999999999
Q ss_pred ccccccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccH
Q psy196 82 DTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSA 161 (364)
Q Consensus 82 ETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~ 161 (364)
|||+|+++||+||+|+|+++|||||||||||++|++|+++|++|+|||||++||++||++|||||||||||+|+++ ||+
T Consensus 112 ETl~q~~~dG~p~~d~L~~~GIVPGIKVDkGl~~l~G~~~e~~t~GLDgL~~R~~~y~~~GarFAKWRsViki~~~-Ps~ 190 (390)
T PLN02425 112 ETLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCG-PSA 190 (390)
T ss_pred HhccccccCCcCHHHHHHHCCceeeEEecCCCCcCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCC-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976 999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccC
Q psy196 162 LAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCS 241 (364)
Q Consensus 162 ~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~ 241 (364)
.+|++||+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||.+|+
T Consensus 191 ~aI~~na~~LArYA~icQ~~GLVPIVEPEVlidGdH~ie~c~~Vte~VL~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~ 270 (390)
T PLN02425 191 LAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHK 270 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceecccccccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCH
Q psy196 242 EKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNV 321 (364)
Q Consensus 242 ~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv 321 (364)
.+++||+||++||+||+||||++||||+|||||||+||||.||||||++ .+||.||||||||||+|+||+|+||++|+
T Consensus 271 ~~~s~e~VA~~Tv~~l~rtVP~AVPGI~FLSGGqseeeAt~~LnamN~~--~~PW~LsFSygRALQ~s~Lk~W~Gk~env 348 (390)
T PLN02425 271 EKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQS--PNPWHVSFSYARALQNSVLKTWQGRPENV 348 (390)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCcceeccCCCcHHHHHHHHHhhcCC--CCCceeecchHHhhCHHHHHHcCCchHHH
Confidence 9999999999999999999999999999999999999999999999986 57999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 322 LAGQNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 322 ~~aQ~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
++||++|++|||+||+|++|+|.++++ +..+.+||||++|.|
T Consensus 349 ~aAQ~~l~~RA~~N~~A~~G~y~~~~~-~~~~~~sl~~~~~~y 390 (390)
T PLN02425 349 EAAQKALLVRAKANSLAQLGRYSAEGE-SEEAKKGMFVKGYTY 390 (390)
T ss_pred HHHHHHHHHHHHHccHHhcCCCCCCCC-cccccccceeccccC
Confidence 999999999999999999999998876 346679999999998
No 6
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=6.9e-154 Score=1113.22 Aligned_cols=329 Identities=68% Similarity=1.082 Sum_probs=325.5
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcc
Q psy196 14 AELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTP 93 (364)
Q Consensus 14 ~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~ 93 (364)
+||.+||++|++|||||||||||+|||+|||++|||||||||||+||++|||| |++++||||||||||||+|+++||+|
T Consensus 2 ~eL~~tA~~iv~~GKGilAADES~gT~~Krl~~iGvente~nrr~yR~llft~-p~~~~~IsGvILfeeTl~q~~~dG~p 80 (330)
T cd00948 2 EELIKTAKAIVAPGKGILAADESTGTIGKRFASIGVENTEENRRAYRELLFTT-PGLGQYISGVILFEETLYQKTDDGKP 80 (330)
T ss_pred hHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCchHHHHHHHHhhccC-CCccccEEEEECChhhccccccCCcC
Confidence 68999999999999999999999999999999999999999999999999999 67889999999999999999999999
Q ss_pred hHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHH
Q psy196 94 FVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLAR 173 (364)
Q Consensus 94 ~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LAr 173 (364)
|+|+|+++|||||||||||++|++|.++|++|+|||+|++||++||++|||||||||||+|++++||..+|.+|++.|||
T Consensus 81 ~~~~L~~~GIvPgIKVDkGl~~l~g~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~PS~~~I~~na~~Lar 160 (330)
T cd00948 81 FVDILKEKGIVPGIKVDKGLVPLAGTDGETTTQGLDGLAERCAKYYKQGARFAKWRAVLKIGNGTPSELAIKENAHGLAR 160 (330)
T ss_pred hHHHHHHCCCeeeEEeCCCccccCCCCCCccCcChHHHHHHHHHHhhcCCcceeeheeeeccCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHH
Q psy196 174 YASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALAT 253 (364)
Q Consensus 174 YA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~T 253 (364)
||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||.+|+.++++++||++|
T Consensus 161 yA~icq~~GLVPIVEPEVl~dG~H~i~~c~~vte~Vl~~vf~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~~~e~vA~~T 240 (330)
T cd00948 161 YAAICQENGLVPIVEPEVLMDGDHDIERCQEVTEKVLAAVYKALNDHHVLLEGTLLKPNMVTPGADCKKKASPEEVAEYT 240 (330)
T ss_pred HHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCCcCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 254 VTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 254 v~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
|+||+||||++||||+|||||||+||||.||||||++...+||.||||||||||+|+||+|+||++|+++||++|++||+
T Consensus 241 v~~l~rtvP~avpGI~FLSGGqseeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~G~~~n~~aaQ~~~~~ra~ 320 (330)
T cd00948 241 VRALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLPLPKPWALSFSYGRALQASALKAWGGKKENVEAAQKALLKRAK 320 (330)
T ss_pred HHHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCcccccchhHHhCHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988778999999999999999999999999999999999999999
Q ss_pred hccccccccc
Q psy196 334 ANGCASLGHY 343 (364)
Q Consensus 334 ~n~~A~~G~y 343 (364)
+||+|++|+|
T Consensus 321 ~N~~A~~G~y 330 (330)
T cd00948 321 ANSLAALGKY 330 (330)
T ss_pred HhhHHhcCCC
Confidence 9999999998
No 7
>PF00274 Glycolytic: Fructose-bisphosphate aldolase class-I; InterPro: IPR000741 Fructose-bisphosphate aldolase (4.1.2.13 from EC) [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms: class I enzymes [] do not require a metal ion, and are characterised by the formation of a Schiff base intermediate between a highly conserved active site lysine and a substrate carbonyl group, while the class II enzymes require an active-site divalent metal ion. This entry represents the class I enzymes. In vertebrates, three forms of this enzyme are found: aldolase A is expressed in muscle, aldolase B in liver, kidney, stomach and intestine, and aldolase C in brain, heart and ovary. The different isozymes have different catalytic functions: aldolases A and C are mainly involved in glycolysis, while aldolase B is involved in both glycolysis and gluconeogenesis. Defects in aldolase B result in hereditary fructose intolerance.; GO: 0004332 fructose-bisphosphate aldolase activity, 0006096 glycolysis; PDB: 1EX5_B 6ALD_D 2QUU_B 3DFN_B 1ADO_B 3DFO_A 1ZAL_A 1J4E_C 3DFP_A 1ZAJ_B ....
Probab=100.00 E-value=5.6e-148 Score=1085.70 Aligned_cols=348 Identities=61% Similarity=0.960 Sum_probs=318.8
Q ss_pred HHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcch
Q psy196 15 ELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPF 94 (364)
Q Consensus 15 eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~ 94 (364)
||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||| ||+++||||||||||||+|+++||+||
T Consensus 1 eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gie~te~~r~~yR~~l~tt-~~~~~~IsGvILfeeTl~q~~~~G~~~ 79 (348)
T PF00274_consen 1 ELRATARAIVAPGKGILAADESGGTIPKRLAAYGIENTEENRRAYRELLFTT-PGLSEYISGVILFEETLYQKTADGKPF 79 (348)
T ss_dssp HHHHHHHHHTGTT-EEEEE---HHHHHHHHHHTTS-CGHHHHHHHHHHHHTS-GGGGGTEEEEEE-HHHHTSBETTSSBH
T ss_pred ChHHHHHHHhCCCCcEEEecCCCccHHHHHHHcCCCCchhhHHHHHHhhhcc-cccccceEEEEcccchhhccccCCCCh
Confidence 7999999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHH
Q psy196 95 VELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARY 174 (364)
Q Consensus 95 ~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArY 174 (364)
+++|+++|||||||||||+.|++|.++|++|+|||||++||++|+++||||||||+||+|++++||..+|.+|++.||||
T Consensus 80 ~~~L~~~GIvpgIKVDkGl~~l~~~~~ek~t~GLD~L~~R~~~y~~~GarFaKwRsVi~i~~~~ps~~~I~~na~~lary 159 (348)
T PF00274_consen 80 PDYLKEKGIVPGIKVDKGLVPLPGGVQEKPTQGLDGLLERCAEYYAFGARFAKWRSVIKIGDGTPSEAAIKANAHQLARY 159 (348)
T ss_dssp HHHHHHTT-EEEEE---EEEEETTSSSEEEEETTTTHHHHHHHHHHTTEEEEEEEEEEESBTTBS-HHHHHHHHHHHHHH
T ss_pred HHHHHhcCceeeEeccCceeccccCCCceeCCCcchHHHHHHHHhhhcccceeeeeeeecCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHH
Q psy196 175 ASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATV 254 (364)
Q Consensus 175 A~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv 254 (364)
|++||++||||||||||+|||+|++++|++||++||++||++|++|+|||||||||||||+||.+|+.+++++|||.+||
T Consensus 160 A~icq~~GLVPIVEPEVli~g~h~~~~~~~vt~~vl~~v~~~l~~~~V~Leg~llKpnmv~pG~~~~~~~~~~~vA~~T~ 239 (348)
T PF00274_consen 160 AAICQEAGLVPIVEPEVLIDGDHDIERCAEVTEAVLAAVFKALNDHGVMLEGTLLKPNMVTPGKDHPKKASPEEVAEATV 239 (348)
T ss_dssp HHHHHHTT-EEEEEEEEESSSSTHHHHHHHHHHHHHHHHHHHHHHTTEEGGGEEEEEB-S---TTSSS---HHHHHHHHH
T ss_pred HHHHHhccCccccccccccCCCchHHHHHHHHHHHHHHHHHhhccCEEEeccccccccceeecccCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHHh
Q psy196 255 TALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARARA 334 (364)
Q Consensus 255 ~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~~ 334 (364)
+||+|+||++||||||||||||+||||.||||||+++.++||.||||||||||+++|++|+|++||+++||++|++|||+
T Consensus 240 ~~l~~~vP~aVpgIvFLSGGqs~e~At~~Lna~n~~~~~~PW~lsFSfgRALq~~~L~~W~g~~en~~aAQ~al~~ra~~ 319 (348)
T PF00274_consen 240 RALRRTVPAAVPGIVFLSGGQSEEEATANLNAINKMPGNKPWPLSFSFGRALQESALKAWQGKDENVAAAQKALLHRAKA 319 (348)
T ss_dssp HHHHHHSBTTSSEEEEB-TTS-HHHHHHHHHHHHHSSS--SSEEEEEESHHHHHHHHHHHTTSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccceeEecCCCCCHHHHHHHHHHhhCCCcCCChheeEEechhhhHHHHHHhccCccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred ccccccccccCCcccCccCccccccccccC
Q psy196 335 NGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 335 n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
|++|++|+|.++++ ++++++||||++|+|
T Consensus 320 n~~A~~G~y~~~~~-~~~~~~sl~~~~y~Y 348 (348)
T PF00274_consen 320 NSLAALGKYSGGME-SGAASESLYVKGYKY 348 (348)
T ss_dssp HHHHTTT-CSSSSS-SSSTTSSCGSSCSG-
T ss_pred cCccccCCcCCCCC-CcccccccccCCccC
Confidence 99999999999987 567789999999999
No 8
>cd00344 FBP_aldolase_I Fructose-bisphosphate aldolase class I. Fructose-1,6-bisphosphate aldolase is an enzyme of the glycolytic and gluconeogenic pathways found in vertebrates, plants, and bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=100.00 E-value=9.3e-139 Score=1011.86 Aligned_cols=327 Identities=68% Similarity=1.090 Sum_probs=322.7
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcc
Q psy196 14 AELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTP 93 (364)
Q Consensus 14 ~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~ 93 (364)
++|.+||++|++|||||||||||+||++|||..+|+||||+|||+||++||+++|++++||||||||||||+|+++||+|
T Consensus 2 ~eL~~~a~~~~~~GKGilAAdEssgt~~kR~~~i~~enteenrr~~r~ll~~~~~~i~~~IsGvILfeeTl~q~~~~g~~ 81 (328)
T cd00344 2 KELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPRIGGVILFHETLYQKADDGRP 81 (328)
T ss_pred hHHHHHHHHhcCCCCeeEEeccCCCcccchhhhCCCCCchhhHHHHHHHHhccCchhhccEEEEEechhhccccCCCCcc
Confidence 68999999999999999999999999999999999999999999999999997689999999999999999999999999
Q ss_pred hHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHH
Q psy196 94 FVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLAR 173 (364)
Q Consensus 94 ~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LAr 173 (364)
|+++|+++|||||||||||++|++|+++|++|+|||+|++||++||++|||||||||||+|++++||..+|.+|++.|||
T Consensus 82 ~~~ll~~~GIvPgIKVDkGl~~l~g~~~ek~t~GLD~L~~R~~~y~~~GarfaKwRsVi~i~~~~Ps~~~I~~na~~lar 161 (328)
T cd00344 82 FPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 161 (328)
T ss_pred HHHHHHhCCCeeeEEecCCcccCCCCCCCccCCChHHHHHHHHHHhhcCCceeeeeeeeecCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHH
Q psy196 174 YASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALAT 253 (364)
Q Consensus 174 YA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~T 253 (364)
||++||++||||||||||||||+|+|++|++|+++||.++|++|++|+|+|||+|||||||+||.+|+.++++++||.+|
T Consensus 162 yA~~cq~~GLVPIVEPEVlidg~h~i~~~~~vt~~vl~~~~~~L~~~~V~leg~lLKpnmv~~G~~~~~~~~~~~va~~t 241 (328)
T cd00344 162 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMAT 241 (328)
T ss_pred HHHHHHHCCCCceecceeCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCcccCeEEEccccccCccCCCcCCHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 254 VTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 254 v~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
+.+|+|+||++||||||||||||+||||.|||+||++..++||.||||||||||+++|++|+||++|+++||++|++||+
T Consensus 242 ~~~l~~~vP~aVpgVvfLSGGqS~eeAt~~Lna~n~~~~~~pW~lsfSfgRALq~~~L~~w~g~~~n~~aaq~a~l~rA~ 321 (328)
T cd00344 242 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRAL 321 (328)
T ss_pred HHHHHhhCCCcCCeEEeccCCCCHHHHHHHHHHhcCCCCCCCceEEechHHHhCHHHHHhcCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987788999999999999999999999999999999999999999
Q ss_pred hcccccc
Q psy196 334 ANGCASL 340 (364)
Q Consensus 334 ~n~~A~~ 340 (364)
+|++|+.
T Consensus 322 ~n~~aa~ 328 (328)
T cd00344 322 ANSLAAQ 328 (328)
T ss_pred HHHHhcC
Confidence 9999873
No 9
>COG3588 Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-126 Score=907.16 Aligned_cols=329 Identities=46% Similarity=0.704 Sum_probs=323.7
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcc
Q psy196 14 AELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTP 93 (364)
Q Consensus 14 ~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~ 93 (364)
.+|.+||.+||++||||||||||+|||+|||++||||+||++||.||+|||+||.++++||||||||||||+|+.++|.|
T Consensus 3 erl~~~a~~~v~nGKG~iAADeS~gt~~krf~~~Gie~te~srrd~Re~l~~s~~~~~~yI~GaILfeeTm~q~~~~g~p 82 (332)
T COG3588 3 ERLNDTALKKVANGKGFIAADESGGTTPKRFDSYGIEETEYSRRDMRERLFTSPDFMEDYILGAILFEETMDQKADGGYP 82 (332)
T ss_pred cchhHHHHHHHhcCCceEeecCCCCchhhHHHHcCCCCchhhhHHHHHHHhcCcccchhhhhheehhHHHHHHhhcCCCC
Confidence 57899999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred hHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHH
Q psy196 94 FVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLAR 173 (364)
Q Consensus 94 ~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LAr 173 (364)
++++++++|||||||||||+.|++|+|+|++|+|||||++||++|+.+|+||||||+||+|+++.||..||.+|++.|||
T Consensus 83 ~~~l~~~kgivPgiKvDkGl~~~~g~~~ek~t~gLd~L~~R~~~~~~~GarfaKwRsvI~~~~~~ps~~~I~~nv~~la~ 162 (332)
T COG3588 83 ADYLWKEKGIVPGIKVDKGLKPLAGVQLEKPTEGLDGLLKRAKEYHIFGARFAKWRSVIKIADGIPSWGGIKANVHQLAE 162 (332)
T ss_pred HHHHHHhcCCCcceeecCCcccccCCccccCCcCHHHHHHHHHHhhhccchHHHHHHHHHhccCCCccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHH
Q psy196 174 YASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALAT 253 (364)
Q Consensus 174 YA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~T 253 (364)
||++||++||||||||||+||||||+++|++|++.+|+.+|++|++..|+|+|++||||||++|+.|.++ ||++||+.|
T Consensus 163 yAa~cq~aGlVPIVEPEV~mdg~~d~~~~eeVtk~~L~k~~~~L~~~~vvm~g~~lk~smv~~g~~~~~~-s~~~vae~t 241 (332)
T COG3588 163 YAALCQAAGLVPIVEPEVDIDGDHDKARSEEVTKAELRKLLNALNEERVVMLGLILKTSMVISGKKSREA-SPDEVAEDT 241 (332)
T ss_pred HHHHHHHCCCcccccceeeccCcccHHHHHHHHHHHHHHHHHHhhhhHhHhhcccccchhcccccccccc-chHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998877 999999999
Q ss_pred HHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 254 VTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 254 v~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
+.+|+.|||..||||||||||||.|||++|||+||... +.||+||||||||||+.+|++|+|+.+|++++|++|++|+.
T Consensus 242 l~~~~~tvP~~vpgIvfLSGG~s~eeA~~~Lsa~n~~~-~~pw~L~fSf~RAL~~~~L~aw~~d~enf~~~q~~~~e~~~ 320 (332)
T COG3588 242 LYSLLSTVPAVVPGIVFLSGGYSSEEANAHLSANNGER-PLPWSLIFSFSRALQEGALKAWQGDEENFAKAQAASIERIY 320 (332)
T ss_pred HHHHHhcCCcccceeEEecCCcchHHHHHHHHhhcCCC-CCCceeeeeHHHHhhhhhhhhhcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999764 68999999999999999999999999999999999999999
Q ss_pred hcccccccccc
Q psy196 334 ANGCASLGHYK 344 (364)
Q Consensus 334 ~n~~A~~G~y~ 344 (364)
.||.+++|+|.
T Consensus 321 ~asl~a~gkw~ 331 (332)
T COG3588 321 EASLAALGKWK 331 (332)
T ss_pred HHHHhhcCCCC
Confidence 99999999996
No 10
>PRK05377 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=100.00 E-value=4.2e-89 Score=651.80 Aligned_cols=263 Identities=30% Similarity=0.365 Sum_probs=236.1
Q ss_pred HhcCCCCceEe-ecCCCCchHHHhhhcCCCCChhhH--------HHhhhhhcccCCCCCCceEEeeeccccccccccCCc
Q psy196 22 TLVEPGKGILA-ADESVSTMGKRLADIGVENTEENR--------RLYRQLLFTTDHELGESISGVILFHDTLYEKADDGT 92 (364)
Q Consensus 22 ~~~a~gKGiLA-aDES~gt~~Krl~~~Gventeenr--------r~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~ 92 (364)
.-+++|||||| +|||+|||||||+.|||||||+|| |+||++|||||.|+++||||||||||||+| ++||+
T Consensus 8 ~~~~~GKG~lAAlDeS~GT~~Krl~~~GVente~n~~~eM~~li~~~R~~l~tsp~f~~~~I~GaILFEeTl~q-~~dG~ 86 (296)
T PRK05377 8 EKMKNGKGFIAALDQSGGSTPKALKLYGVEEDAYSNEEEMFDLVHEMRTRIITSPAFTGDKILGAILFEQTMDR-EIEGK 86 (296)
T ss_pred HhhcCCCceEEehhccCCchHHHHHHcCCCCcccccchhHHHHHHHHhhccccCccccccceEEEEcchHhhcC-ccCCc
Confidence 35789999996 599999999999999999999995 999999999977799999999999999999 78999
Q ss_pred chHHHHhh-CCCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHH
Q psy196 93 PFVELLRQ-RGIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANV 170 (364)
Q Consensus 93 ~~~~~L~~-~GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~ 170 (364)
||+++||+ +|||||||||||++|++ |.+.|++|+|||+|++||++| |++||||||||+|+ +..+|.+|++.
T Consensus 87 p~~d~L~e~kGIVPgIKVDKGl~~l~~gvql~k~~~GLD~Ll~R~~~y---~~~GaKwRsViki~----~~~~I~~na~q 159 (296)
T PRK05377 87 PTADYLWEKKGVVPFLKVDKGLAEEANGVQLMKPIPNLDDLLDRAVEK---GIFGTKMRSVIKEA----NEQGIAAVVAQ 159 (296)
T ss_pred CHHHHHHhcCCcceEEEecCCcccCCCCccccccCCCHHHHHHHHHHh---CCCccceeeeecCC----CHHHHHHHHHH
Confidence 99999997 99999999999999998 788899999999999999988 56679999999995 47899999999
Q ss_pred HHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhh-cCceeeecccc-cCCccCCCCccCCCCChHH
Q psy196 171 LARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALH-DHNVYLEGILL-KPNMVTPGASCSEKYAPSD 248 (364)
Q Consensus 171 LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~-~~~V~LegtlL-KpnmV~pG~~~~~~~~~~e 248 (364)
|||||++||++||||||||||+|||.+ .+.|+.+....+.+-++.|. ++.|||++||+ ++|+|.+..+
T Consensus 160 laryA~~~q~~GLVPIVEPEVli~~~~-k~~~e~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~Y~~l~~--------- 229 (296)
T PRK05377 160 QFEVAKQILAAGLVPIIEPEVDINSPD-KAEAEAILKAEILKQLDALPEDQQVMLKLTIPTEANLYKELID--------- 229 (296)
T ss_pred HHHHHHHHHHcCCCceECCeECCCCcC-HHHHHHHHHHHHHHHHhhCCCCCeEEEEEecCCCCCcchhhcc---------
Confidence 999999999999999999999999995 68887665555554555554 78999999999 8899988655
Q ss_pred HHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHH
Q psy196 249 IALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNEL 328 (364)
Q Consensus 249 vA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~ 328 (364)
||.|++||+||||||++||+++|.. | .+|++||||||.+ .| |+.+.+++|
T Consensus 230 -------------hp~v~rvVaLSGGysr~eA~~~L~~-n-------~g~iASfSRal~e-gl--------~~~qsd~ef 279 (296)
T PRK05377 230 -------------HPRVLRVVALSGGYSRDEANELLAR-N-------HGLIASFSRALTE-GL--------SAQQSDEEF 279 (296)
T ss_pred -------------CCCeeEEEEccCCcCHHHHHHHHhh-C-------CCcEEEehHHhhC-cC--------CccCCHHHH
Confidence 8999999999999999999999995 3 5999999999999 55 667777787
Q ss_pred HHHH
Q psy196 329 LARA 332 (364)
Q Consensus 329 ~~ra 332 (364)
....
T Consensus 280 ~~~l 283 (296)
T PRK05377 280 DATL 283 (296)
T ss_pred HHHH
Confidence 7544
No 11
>cd00949 FBP_aldolase_I_bact Fructose-1.6-bisphosphate aldolase found in gram +/- bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). The enzyme is member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=7.1e-85 Score=621.86 Aligned_cols=261 Identities=31% Similarity=0.390 Sum_probs=233.5
Q ss_pred HhcCCCCceE-eecCCCCchHHHhhhcCCCCC-----hhhHH---HhhhhhcccCCCCCCceEEeeeccccccccccCCc
Q psy196 22 TLVEPGKGIL-AADESVSTMGKRLADIGVENT-----EENRR---LYRQLLFTTDHELGESISGVILFHDTLYEKADDGT 92 (364)
Q Consensus 22 ~~~a~gKGiL-AaDES~gt~~Krl~~~Gvent-----eenrr---~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~ 92 (364)
.-+++||||| |+|||+|||+|||++|||||| ||||+ +||++|||||.|+++||||||||||||+|+ .||+
T Consensus 5 ~~~~~GKGilAAlDES~GT~~Krl~~iGVent~y~~eee~r~~ih~~R~~lftsp~f~~~~IsGaILFEeTl~q~-~dG~ 83 (292)
T cd00949 5 ERMKSGKGFIAALDQSGGSTPKALAAYGIEEDAYSNEEEMFDLVHEMRTRIITSPAFDGDKILGAILFEQTMDRE-IEGK 83 (292)
T ss_pred HhccCCCceEEehhccCCchHHHHHHcCCCCCCCCChHHHHHHHHHHhhccccCccccccceEEEEccHHhhcCc-cCCc
Confidence 3578999999 559999999999999999999 99995 999999999767999999999999999997 7999
Q ss_pred chHHHHhhCC-CeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHH
Q psy196 93 PFVELLRQRG-IIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANV 170 (364)
Q Consensus 93 ~~~~~L~~~G-IvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~ 170 (364)
||+++||++| ||||||||||++|++ |.+.|++|+|||+|++||++| |++||||||||+|++. ||+.+|++|++.
T Consensus 84 p~~d~L~e~ggIVPgIKVDKGl~~la~Ge~lmk~~~GLD~Ll~R~~~~---~~~GaKwRsVIki~~~-~~i~aiv~qq~~ 159 (292)
T cd00949 84 PTADYLWEKKQIVPFLKVDKGLAEEKNGVQLMKPIPNLDELLMRAKEK---GVFGTKMRSVIKEANP-KGIAAVVDQQFE 159 (292)
T ss_pred CHHHHHHhcCCeeeEEEecCCcccCCCCcccCcCCccHHHHHHHHHHh---CCCCcceeeEeecCCc-chHHHHHHHHHH
Confidence 9999999876 999999999999998 778888999999999999988 5666999999999976 999999999988
Q ss_pred HHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhh----cCceeeecccc-cCCccCCCCccCCCCC
Q psy196 171 LARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALH----DHNVYLEGILL-KPNMVTPGASCSEKYA 245 (364)
Q Consensus 171 LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~----~~~V~LegtlL-KpnmV~pG~~~~~~~~ 245 (364)
| |++||++||||||||||+|+.++ .+.|+ +.+.+++.++|+ ++.|||+.||+ ++|+|.+..+
T Consensus 160 l---A~~cq~~GLVPIVEPEVli~~~~-k~~~e---~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~y~~l~~------ 226 (292)
T cd00949 160 L---AKQILSHGLVPIIEPEVDIHSAD-KAKCE---AILKAEILKHLDKLPEGQQVMLKLTLPTEANFYSELIE------ 226 (292)
T ss_pred H---HHHHHHcCCCceECceECCCCcc-HHHHH---HHHHHHHHHHHhcCCCCCeEEEEEecCCCcChhHHHhc------
Confidence 8 79999999999999999999985 46663 335568888885 78999999998 8888888766
Q ss_pred hHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHH
Q psy196 246 PSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQ 325 (364)
Q Consensus 246 ~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ 325 (364)
||.|.+||+||||||++||++.|.. | .+|++||||||.+ .| |+.+.+
T Consensus 227 ----------------hp~v~rvvalsggysr~~a~~~l~~-n-------~g~iasfsral~e-gl--------~~~qsd 273 (292)
T cd00949 227 ----------------HPKVLRVVALSGGYSREEANELLAK-N-------NGVIASFSRALTE-GL--------SADQSD 273 (292)
T ss_pred ----------------CCCeEEEEEcCCCcCHHHHHHHHhh-C-------CCcEEEehHHhhC-cC--------CccCCH
Confidence 8999999999999999999999995 3 5999999999999 55 677778
Q ss_pred HHHHHHHH
Q psy196 326 NELLARAR 333 (364)
Q Consensus 326 ~~~~~ra~ 333 (364)
++|.....
T Consensus 274 ~ef~~~l~ 281 (292)
T cd00949 274 AEFNATLE 281 (292)
T ss_pred HHHHHHHH
Confidence 88875543
No 12
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=97.23 E-value=0.14 Score=51.52 Aligned_cols=276 Identities=19% Similarity=0.220 Sum_probs=162.7
Q ss_pred cCCCCceEee---cCCCCchHHHhhhcC-CCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHH-
Q psy196 24 VEPGKGILAA---DESVSTMGKRLADIG-VENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELL- 98 (364)
Q Consensus 24 ~a~gKGiLAa---DES~gt~~Krl~~~G-venteenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L- 98 (364)
+++.+|++++ ||= |++.|-|.+.+ -+.+.+.=..+-.++.. .+..|-|++.|.+|= |-|-.+.+
T Consensus 12 ls~~~G~i~aLA~DQR-gslkkm~a~~~~~~~~~~~i~~fK~lvs~---~Ltp~ASaILlDpey-------glpa~~~~~ 80 (324)
T PRK12399 12 LSNENGIISALAFDQR-GALKRMMAQHQTEEPTVAQIEELKVLVSE---ELTPYASSILLDPEY-------GLPASKARD 80 (324)
T ss_pred hcCCCCCEEEEEeccH-HHHHHHHHhccCCCCCHHHHHHHHHHHHH---Hhccccceeeecccc-------CchhhcccC
Confidence 4556666544 986 56788888875 34355555677777643 477788887776653 22223333
Q ss_pred hhCCCeeeEecCCCcccCCCCCCCCcCCC-hhhHHH--HHHHhhhCCCccceeeeeeecCCCCccHHHH-HHHHHHHHHH
Q psy196 99 RQRGIIPGIKVDKGVVPLAGTDGETTTQG-LDDLAK--RCDKYKTDGCHFAKWRCVLKIGDHTPSALAI-LENANVLARY 174 (364)
Q Consensus 99 ~~~GIvpGIKvDkGl~pl~g~~~e~~t~G-LD~L~~--R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI-~~na~~LArY 174 (364)
++.|++... .--|- +..++| |++|.. -.++.+++|+.+.|-=--++.++. | .| ..+..-+.|.
T Consensus 81 ~~~GLllay-------EktGy--D~~~~gRl~~ll~~wS~~rike~GadavK~Llyy~pD~~-~---~in~~k~a~verv 147 (324)
T PRK12399 81 EDAGLLLAY-------EKTGY--DATTTGRLPDCLDDWSAKRIKEEGADAVKFLLYYDVDEP-D---EINEQKKAYIERI 147 (324)
T ss_pred cCCceEEEe-------hhhCC--ccCCCCCcccccchhhHHHHHHhCCCeEEEEEEECCCCC-H---HHHHHHHHHHHHH
Confidence 455666552 11122 233444 444433 245557889999997666665432 2 23 3455667889
Q ss_pred HHHHHhCCceeeecceecC---CCccchHHHHHH-HHHHHHHHHHHhhc--Cceee-ecccc-cCCccCCCCcc-CCCCC
Q psy196 175 ASICQASRIVPIVEPEVLP---DGAHDLARCQKV-TEAVLASVVKALHD--HNVYL-EGILL-KPNMVTPGASC-SEKYA 245 (364)
Q Consensus 175 A~icQ~~GLVPIVEPEVl~---dg~h~i~~~~~v-te~vL~~v~~~L~~--~~V~L-egtlL-KpnmV~pG~~~-~~~~~ 245 (364)
.+-|.+++|-=++||=+-. +..++. .-+++ -++|+. -.+.+.+ .||++ +--++ -.|+| -|... ..-+|
T Consensus 148 g~eC~a~dipf~lE~ltY~~~~~d~~~~-~yak~kP~~V~~-a~kefs~~~~gvDVlKvEvPvn~~~v-eG~~~~e~~yt 224 (324)
T PRK12399 148 GSECVAEDIPFFLEILTYDEKIADNGSV-EYAKVKPHKVNE-AMKVFSKPRFGVDVLKVEVPVNMKYV-EGFAEGEVVYT 224 (324)
T ss_pred HHHHHHCCCCeEEEEeeccCcccccccH-HHHhhChHHHHH-HHHHhccCCCCCcEEEEecccccccc-cccCccccccc
Confidence 9999999999999997743 223332 33455 455554 3566654 67764 22222 33445 44332 22345
Q ss_pred hHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHH
Q psy196 246 PSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQ 325 (364)
Q Consensus 246 ~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ 325 (364)
.+|.+. .++-+.+. ..+|= +|||+|-|.+.=..-|.--... + .---.|=.|||+=.++++.+... +.++++
T Consensus 225 ~~eA~~-~f~~~~~~--~~~P~-i~LSaGV~~~~F~~~l~~A~~a-G--a~fsGvL~GRAtW~~~v~~~~~~--g~~~~~ 295 (324)
T PRK12399 225 KEEAAQ-HFKEQDAA--THLPY-IYLSAGVSAELFQETLVFAHEA-G--AKFNGVLCGRATWAGSVKVYIEQ--GEAAAR 295 (324)
T ss_pred HHHHHH-HHHHHhhc--cCCCE-EEEcCCCCHHHHHHHHHHHHHc-C--CCcceEEeehhhhHhhhhhhhcC--CHHHHH
Confidence 555443 34333333 44554 5999999998777666633321 1 11135778999999999988654 346777
Q ss_pred HHHHHHHHhc
Q psy196 326 NELLARARAN 335 (364)
Q Consensus 326 ~~~~~ra~~n 335 (364)
+-|....+.|
T Consensus 296 ewL~t~g~~n 305 (324)
T PRK12399 296 EWLRTEGFEN 305 (324)
T ss_pred HHHHHHhHHH
Confidence 7777666665
No 13
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=97.11 E-value=0.087 Score=53.13 Aligned_cols=273 Identities=19% Similarity=0.169 Sum_probs=139.1
Q ss_pred eEeecCCCCchHHHhhhc-CCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHHhhCCCeeeEe
Q psy196 30 ILAADESVSTMGKRLADI-GVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELLRQRGIIPGIK 108 (364)
Q Consensus 30 iLAaDES~gt~~Krl~~~-Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIK 108 (364)
+||.|+ -|.+.+-+.+. +-+-+.+.=..+..++... +..+.||++|..+ +..-.. .....+.|+|..
T Consensus 22 ~lAiDH-rG~l~~m~~~~~~~~~~~~~l~~~K~lv~~~---l~~~asaILld~~-yG~~a~-----~~~~~~~GLil~-- 89 (340)
T PRK12858 22 AAAMDQ-RGSLKKMLAKARGDEASYTDLVDFKLAVSEA---LTPYASAILLDPE-YGLPAA-----KVRDPNCGLLLS-- 89 (340)
T ss_pred EEecCC-ccHHHHHHHhccccCcchhhHHHHHHHHHHH---HhhCCCEEEEccc-cChhhh-----cccCCCCCeEEE--
Confidence 344499 78888877652 1222222334555555433 3445677766543 322110 111246777766
Q ss_pred cCCCcccCCCCCCCCcCCC-hhhHHHH--HHHhhhCCCccceeeeeeecCCCCccHHHH-HHHHHHHHHHHHHHHhCCce
Q psy196 109 VDKGVVPLAGTDGETTTQG-LDDLAKR--CDKYKTDGCHFAKWRCVLKIGDHTPSALAI-LENANVLARYASICQASRIV 184 (364)
Q Consensus 109 vDkGl~pl~g~~~e~~t~G-LD~L~~R--~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI-~~na~~LArYA~icQ~~GLV 184 (364)
+|+. |. +.++.| ++++..- ..+..++||..-|--..+..+ ..| .| .++...|+|-...|++.|+-
T Consensus 90 ~e~t-----g~--d~t~~gr~~~~~~~~sve~a~~~GAdAVk~lv~~~~d-~~~---~~~~~~~~~l~rv~~ec~~~giP 158 (340)
T PRK12858 90 YEKT-----GY--DATAPGRLPDLLDNWSVRRIKEAGADAVKLLLYYRPD-EDD---AINDRKHAFVERVGAECRANDIP 158 (340)
T ss_pred eccc-----cc--ccCCCCCCccccccccHHHHHHcCCCEEEEEEEeCCC-cch---HHHHHHHHHHHHHHHHHHHcCCc
Confidence 4441 10 001111 2222111 133467899877754444322 122 22 33555799999999999998
Q ss_pred eeecceecCCCccchHH--HHHHHHHHHHHHHHHhh--cCceee-ecccc-cCCccCCCCccCC-CCChHHHHHHHHHHh
Q psy196 185 PIVEPEVLPDGAHDLAR--CQKVTEAVLASVVKALH--DHNVYL-EGILL-KPNMVTPGASCSE-KYAPSDIALATVTAL 257 (364)
Q Consensus 185 PIVEPEVl~dg~h~i~~--~~~vte~vL~~v~~~L~--~~~V~L-egtlL-KpnmV~pG~~~~~-~~~~~evA~~Tv~~l 257 (364)
=++||=+...|..+-.. -+++....+....+.+. +.||++ |--.+ .++.| .|.+..+ .++.++.++. ++-+
T Consensus 159 lllE~l~y~~~~~~~~~~~~a~~~p~~V~~a~r~~~~~elGaDvlKve~p~~~~~v-eg~~~~~~~~~~~~~~~~-f~~~ 236 (340)
T PRK12858 159 FFLEPLTYDGKGSDKKAEEFAKVKPEKVIKTMEEFSKPRYGVDVLKVEVPVDMKFV-EGFDGFEEAYTQEEAFKL-FREQ 236 (340)
T ss_pred eEEEEeccCCCccccccccccccCHHHHHHHHHHHhhhccCCeEEEeeCCCCcccc-cccccccccccHHHHHHH-HHHH
Confidence 78876444444322111 11122223333445555 478863 22221 12222 4543222 2344443333 2222
Q ss_pred hccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHHhc
Q psy196 258 QRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARARAN 335 (364)
Q Consensus 258 ~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~~n 335 (364)
.+..| + -++|||||-|.++--.-|..--.. + .. --.+.+||++=++++..|...+ .+++++-|...++.|
T Consensus 237 ~~a~~--~-P~vvlsgG~~~~~f~~~l~~A~~a-G-a~-f~Gvl~GRniwq~~v~~~~~~~--~~~~~~~l~~~g~~~ 306 (340)
T PRK12858 237 SDATD--L-PFIFLSAGVSPELFRRTLEFACEA-G-AD-FSGVLCGRATWQDGIEPYAAEG--EEARRAWLNTEGVAN 306 (340)
T ss_pred HhhCC--C-CEEEECCCCCHHHHHHHHHHHHHc-C-CC-ccchhhhHHHHhhhhccccCCC--HHHHHHHHHHHhHHH
Confidence 23322 3 477999999998866666532221 1 00 0468899999999999886654 356666665555554
No 14
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=97.05 E-value=0.14 Score=51.66 Aligned_cols=279 Identities=19% Similarity=0.189 Sum_probs=161.8
Q ss_pred cCCCCceEee---cCCCCchHHHhhhcC-CCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHH-
Q psy196 24 VEPGKGILAA---DESVSTMGKRLADIG-VENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELL- 98 (364)
Q Consensus 24 ~a~gKGiLAa---DES~gt~~Krl~~~G-venteenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L- 98 (364)
+++.+|++++ ||= |++.|-|.+.+ -+.+.+.=..+-.++.. .+..|-|++.|.+|==. |=...+
T Consensus 14 ls~~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lvs~---~Ltp~ASaILlDpeygl-------pa~~~~~ 82 (329)
T PRK04161 14 VSNSQGIISALAFDQR-GALKRMMAAHQEGEATVTQIETLKVLVSE---ELTPYASSILLDPEYGL-------PATKVRA 82 (329)
T ss_pred hcCCCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHHHH---HhhhhcceeeeccccCc-------cchhccC
Confidence 4456676554 985 56888888775 44455555677777643 57788777666555322 212222
Q ss_pred hhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHH--HHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHH
Q psy196 99 RQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAK--RCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYAS 176 (364)
Q Consensus 99 ~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~--R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~ 176 (364)
.+.|++... +| -|- .+++..-|++|.+ -.++.+++|+.+.|-=--++.++ .|-+. ..+..-+.|..+
T Consensus 83 ~~~GLllay--Ek-----tGy-D~~~~gRl~~ll~~ws~~rike~GadavK~Llyy~pD~-~~ein--~~k~a~vervg~ 151 (329)
T PRK04161 83 NQTGLLLAY--EK-----TGY-DATTTSRLPDCLVEWSVKRLKEAGADAVKFLLYYDVDG-DEEIN--DQKQAYIERIGS 151 (329)
T ss_pred CCCceEEee--cc-----cCc-ccCCCCccccccchhhHHHHHHhCCCeEEEEEEECCCC-CHHHH--HHHHHHHHHHHH
Confidence 355555542 11 121 2233334555553 34556889999999766666543 23222 345566788999
Q ss_pred HHHhCCceeeecceecC---CCccchHHHHHHHHHHHHHHHHHhhc--Cceee-ecccc-cCCccCCCCcc-CCCCChHH
Q psy196 177 ICQASRIVPIVEPEVLP---DGAHDLARCQKVTEAVLASVVKALHD--HNVYL-EGILL-KPNMVTPGASC-SEKYAPSD 248 (364)
Q Consensus 177 icQ~~GLVPIVEPEVl~---dg~h~i~~~~~vte~vL~~v~~~L~~--~~V~L-egtlL-KpnmV~pG~~~-~~~~~~~e 248 (364)
-|.+++|-=++||=+-. +..++.+-+..--++|+.+ .+.+.+ .||++ +--++ -.|+| -|... ...+|-+|
T Consensus 152 eC~a~dipf~lE~l~Yd~~~~d~~~~eyak~kP~~V~~a-mkefs~~~~gvDVlKvEvPvn~~~v-eG~~~g~~~yt~~e 229 (329)
T PRK04161 152 ECTAEDIPFFLELLTYDERISDNNSAAYAKLKPHKVNGA-MKVFSDKRFGVDVLKVEVPVNMAYV-EGFTEGEVVYSQEE 229 (329)
T ss_pred HHHHCCCCeEEEEeccCCcccccccHHHHhhChHHHHHH-HHHhccCCCCCcEEEEecccccccc-cccCcccccccHHH
Confidence 99999999999987642 2233333322224556654 366653 67764 22232 33455 33322 23455555
Q ss_pred HHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHH
Q psy196 249 IALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNEL 328 (364)
Q Consensus 249 vA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~ 328 (364)
.+.+ ++-+.+. ..+|= +|||+|-|.+.=-.-|.--.+. + .---.|=.|||+=.++++.+..+ +.+++++-|
T Consensus 230 A~~~-f~~~~~~--~~~P~-i~LSaGV~~~~F~~~l~~A~~a-G--a~fnGvL~GRAtW~~~v~~~~~~--g~~a~~~wL 300 (329)
T PRK04161 230 AIKA-FKDQEAA--THLPY-IYLSAGVSAKLFQETLVFAAEA-G--AQFNGVLCGRATWAGSVPVYITE--GEEAARKWL 300 (329)
T ss_pred HHHH-HHHHhcc--cCCCE-EEEcCCCCHHHHHHHHHHHHhc-C--CCcccEEeehhhhhhhhhhhhcC--CHHHHHHHH
Confidence 5433 3333333 44554 5999999998777666632221 1 11125678999999999988654 446777777
Q ss_pred HHHHHhc
Q psy196 329 LARARAN 335 (364)
Q Consensus 329 ~~ra~~n 335 (364)
....+.|
T Consensus 301 ~t~g~~n 307 (329)
T PRK04161 301 CTEGFQN 307 (329)
T ss_pred HHHhHHH
Confidence 6666665
No 15
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase. This family consists of Gram-positive proteins. Tagatose 1,6-diphosphate aldolase is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=96.85 E-value=0.36 Score=48.68 Aligned_cols=278 Identities=18% Similarity=0.204 Sum_probs=161.9
Q ss_pred cCCCCceEee---cCCCCchHHHhhhcC-CCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHH-
Q psy196 24 VEPGKGILAA---DESVSTMGKRLADIG-VENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELL- 98 (364)
Q Consensus 24 ~a~gKGiLAa---DES~gt~~Krl~~~G-venteenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L- 98 (364)
+++.+|++++ ||= |++.|-|.+.+ -+.+.+.=..+-.++.. .+..|-|++.|.+|== -|-.+.+
T Consensus 13 ls~~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lvs~---~LtpyASaILlDpeyg-------lpa~~~~~ 81 (325)
T TIGR01232 13 LSNNEGIISALAFDQR-GALKRLMAKHQTEEPTVAQIEQLKVLVAE---ELTQYASSILLDPEYG-------LPASDARN 81 (325)
T ss_pred hcCCCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHHHH---HhccccceEeEccccC-------cchhhccC
Confidence 3456666544 985 57888888775 34355555677777643 4777888877766532 2223333
Q ss_pred hhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHH--HHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHH
Q psy196 99 RQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKR--CDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYAS 176 (364)
Q Consensus 99 ~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R--~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~ 176 (364)
++.|+|... |+ .|- .++...-|++|+.- .++.+++|+.+.|-=--++.++. |- .-..+..-+.|..+
T Consensus 82 ~~~GLllay--Ek-----tGy-d~~~~gRl~~ll~~~s~~rike~GadavK~Llyy~pD~~-~e--in~~k~a~vervg~ 150 (325)
T TIGR01232 82 KDCGLLLAY--EK-----TGY-DVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDA-EE--INIQKKAYIERIGS 150 (325)
T ss_pred cCCceEEEe--Hh-----hCC-cCCCCCcCccccccccHHHHHHhCCCeEEEEEEeCCCCC-hH--HHHHHHHHHHHHHH
Confidence 466666552 22 122 12222234555332 45557889999997666665432 32 22346667889999
Q ss_pred HHHhCCceeeecceecC---CCccchHHHHHH-HHHHHHHHHHHhhc--Cceee-ecccc-cCCccCCCCcc-CCCCChH
Q psy196 177 ICQASRIVPIVEPEVLP---DGAHDLARCQKV-TEAVLASVVKALHD--HNVYL-EGILL-KPNMVTPGASC-SEKYAPS 247 (364)
Q Consensus 177 icQ~~GLVPIVEPEVl~---dg~h~i~~~~~v-te~vL~~v~~~L~~--~~V~L-egtlL-KpnmV~pG~~~-~~~~~~~ 247 (364)
-|.++||-=++||=+-- ...++.+ -+++ -++|+.+ .+.+.+ .||++ +--++ -.++| -|... ..-+|-+
T Consensus 151 ec~a~dipf~lE~ltYd~~~~~~~~~~-yak~kP~~V~~a-~kefs~~~~gvDVlKvEvPvn~~~v-eG~~~~e~~yt~~ 227 (325)
T TIGR01232 151 ECVAEDIPFFLEVLTYDDNIPDNGSVE-FAKVKPRKVNEA-MKLFSEPRFNVDVLKVEVPVNVKYV-EGFAEGEVVYTKE 227 (325)
T ss_pred HHHHCCCCeEEEEeccCCCCCCCCcHH-HHHhChHHHHHH-HHHhccCCCCCcEEEEecccccccc-cccCcccccccHH
Confidence 99999999999987752 1223333 3334 4555554 566655 67764 22222 22334 34332 2234545
Q ss_pred HHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHH
Q psy196 248 DIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNE 327 (364)
Q Consensus 248 evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~ 327 (364)
|.+.+ ++-+.+. ..+|= +|||+|-|.+.=-.-|.--... + .---.|=.|||+=.++++.+... +.+++++-
T Consensus 228 eA~~~-f~eq~~~--~~~P~-i~LSaGV~~~~F~~~l~~A~~a-G--a~fsGvL~GRAtW~~~v~~~~~~--g~~~~~ew 298 (325)
T TIGR01232 228 EAAQH-FKDQDAA--THLPY-IYLSAGVSAELFQETLKFAHEA-G--AKFNGVLCGRATWSGAVQVYIEQ--GEDAAREW 298 (325)
T ss_pred HHHHH-HHHHhhc--cCCCE-EEEcCCCCHHHHHHHHHHHHHc-C--CCcceEEeehhhhHhhhhhhhcC--CHHHHHHH
Confidence 54433 3322222 44554 5999999998777666633321 1 11135778999999999888654 34677777
Q ss_pred HHHHHHhc
Q psy196 328 LLARARAN 335 (364)
Q Consensus 328 ~~~ra~~n 335 (364)
|....+.|
T Consensus 299 L~t~g~~n 306 (325)
T TIGR01232 299 LRTTGFKN 306 (325)
T ss_pred HHHHhHHH
Confidence 77766665
No 16
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=88.13 E-value=12 Score=35.96 Aligned_cols=156 Identities=15% Similarity=0.185 Sum_probs=84.4
Q ss_pred hhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHH
Q psy196 129 DDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEA 208 (364)
Q Consensus 129 D~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~ 208 (364)
..+...+++..+.||..-+.|.-+. .. ... +....+++-..+|++.|+.=||. +..+|.| ++.|... .
T Consensus 93 ~~~~~~ve~A~~~Gad~v~~~~~~g--~~--~~~---~~~~~~~~v~~~~~~~g~pl~vi--~~~~g~~-~e~~~~~--~ 160 (267)
T PRK07226 93 KVLVGTVEEAIKLGADAVSVHVNVG--SE--TEA---EMLEDLGEVAEECEEWGMPLLAM--MYPRGPG-IKNEYDP--E 160 (267)
T ss_pred ceeeecHHHHHHcCCCEEEEEEecC--Ch--hHH---HHHHHHHHHHHHHHHcCCcEEEE--EecCCCc-cCCCccH--H
Confidence 3344456666788998666654433 21 122 24556666678999999865663 3456666 3444322 1
Q ss_pred HHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCC-CCCceEEEcCCCCC---HHHHHHHH
Q psy196 209 VLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLP-VAVPGVVFLSGGQT---EEEASVHL 284 (364)
Q Consensus 209 vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP-~aVpgVvFLSGGqs---~eeAt~~L 284 (364)
.+....+...+.|++ ++|+++. | + +..|++.+. ..+| ++.|||-+ .+++-+++
T Consensus 161 ~i~~a~~~a~e~GAD----~vKt~~~--~-------~--------~~~l~~~~~~~~ip--V~a~GGi~~~~~~~~l~~v 217 (267)
T PRK07226 161 VVAHAARVAAELGAD----IVKTNYT--G-------D--------PESFREVVEGCPVP--VVIAGGPKTDTDREFLEMV 217 (267)
T ss_pred HHHHHHHHHHHHCCC----EEeeCCC--C-------C--------HHHHHHHHHhCCCC--EEEEeCCCCCCHHHHHHHH
Confidence 222222333344544 3577732 2 1 233333333 2456 48999988 35666666
Q ss_pred HHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 285 NAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 285 naiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
...-+. +- -..|+||++-+ .+|..++-++|..--.
T Consensus 218 ~~~~~a-GA----~Gis~gr~i~~---------~~~p~~~~~~l~~~v~ 252 (267)
T PRK07226 218 RDAMEA-GA----AGVAVGRNVFQ---------HEDPEAITRAISAVVH 252 (267)
T ss_pred HHHHHc-CC----cEEehhhhhhc---------CCCHHHHHHHHHHHHh
Confidence 332221 21 17789998764 2567777766665443
No 17
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=86.19 E-value=13 Score=34.61 Aligned_cols=149 Identities=17% Similarity=0.188 Sum_probs=76.7
Q ss_pred HHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHH
Q psy196 133 KRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLAS 212 (364)
Q Consensus 133 ~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~ 212 (364)
..+.+..+.||..-.. +++++.. + -.++...+++....|.+.|+--||| +..+|.|- .. ..+...+..
T Consensus 80 ~~v~~a~~~Ga~~v~~--~~~~~~~-~----~~~~~~~i~~v~~~~~~~g~~~iie--~~~~g~~~-~~--~~~~~~i~~ 147 (235)
T cd00958 80 ASVEDAVRLGADAVGV--TVYVGSE-E----EREMLEELARVAAEAHKYGLPLIAW--MYPRGPAV-KN--EKDPDLIAY 147 (235)
T ss_pred cCHHHHHHCCCCEEEE--EEecCCc-h----HHHHHHHHHHHHHHHHHcCCCEEEE--EeccCCcc-cC--ccCHHHHHH
Confidence 3445556778764222 2333321 2 2456667777788999999988884 56677763 21 111111221
Q ss_pred HHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCC---CCHHHHHHHHHHhhc
Q psy196 213 VVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGG---QTEEEASVHLNAINQ 289 (364)
Q Consensus 213 v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGG---qs~eeAt~~LnaiN~ 289 (364)
..+...+.|.++ +|.+. +. +.+. ++.+.+.+| +| ++.||| .+.+++-.|+...-+
T Consensus 148 ~~~~a~~~GaD~----Ik~~~-~~--------~~~~-----~~~i~~~~~--~p--vv~~GG~~~~~~~~~l~~~~~~~~ 205 (235)
T cd00958 148 AARIGAELGADI----VKTKY-TG--------DAES-----FKEVVEGCP--VP--VVIAGGPKKDSEEEFLKMVYDAME 205 (235)
T ss_pred HHHHHHHHCCCE----EEecC-CC--------CHHH-----HHHHHhcCC--CC--EEEeCCCCCCCHHHHHHHHHHHHH
Confidence 112222344443 23321 11 1122 222333344 45 377898 467777677665443
Q ss_pred ccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHH
Q psy196 290 TQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELL 329 (364)
Q Consensus 290 ~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~ 329 (364)
. + .=.+++||++.+ .+|..++-++|.
T Consensus 206 ~-G----a~gv~vg~~i~~---------~~dp~~~~~~~~ 231 (235)
T cd00958 206 A-G----AAGVAVGRNIFQ---------RPDPVAMLRAIS 231 (235)
T ss_pred c-C----CcEEEechhhhc---------CCCHHHHHHHHH
Confidence 2 2 226799999874 346666665553
No 18
>COG3684 LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=44.73 E-value=2.3e+02 Score=28.58 Aligned_cols=179 Identities=18% Similarity=0.232 Sum_probs=100.0
Q ss_pred CCCCceEee---cCCCCchHHHhhhcCCCC--ChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHH-
Q psy196 25 EPGKGILAA---DESVSTMGKRLADIGVEN--TEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELL- 98 (364)
Q Consensus 25 a~gKGiLAa---DES~gt~~Krl~~~Gven--teenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L- 98 (364)
.+.+|+++| ||- |.+.+-|++-+-+. |-.+-..+..++ | ..+..|-|.+.|..|=-.-...+ -..|
T Consensus 15 s~~~G~iaaLA~DQR-gamr~m~a~~~~~epvt~~~led~Kv~v--a-~eLtpyASaiLLDpeyg~pa~~~----~~~~~ 86 (306)
T COG3684 15 SRASGGIAALAFDQR-GAMRRMMAAAQAEEPVTVSQLEDFKVLV--A-EELTPYASAILLDPEYGLPAIVE----RNAIA 86 (306)
T ss_pred hccCCceEEEEeccH-hHHHHHHHhCCCCCCcHHHHHHHHHHHH--H-HHhhhhhHHhhcChhhcchHHHH----hcccc
Confidence 345566555 886 45677777777665 444444555443 2 45777888877766643322111 0011
Q ss_pred hhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHH--HHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHH
Q psy196 99 RQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKR--CDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYAS 176 (364)
Q Consensus 99 ~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R--~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~ 176 (364)
++-|.+.+. |+ .| .+-+++.-|-+|... +++.++.|+.--|.---+.++. | ..-..+...+-|.-+
T Consensus 87 ~~~~lL~a~--dk-----tg-yd~t~~~rlp~l~~~isa~riK~~G~~avK~Lvy~~~D~--~--e~neqk~a~ierigs 154 (306)
T COG3684 87 KSCALLLAY--DK-----TG-YDNTIPVRLPDLLRKISAKRIKEDGGDAVKFLVYYRSDE--D--EINEQKLAYIERIGS 154 (306)
T ss_pred cccceeeeh--hh-----hc-CCCCCCccchhhhhhhCHHHHHHhcccceEEEEEEcCCc--h--HHhHHHHHHHHHHHH
Confidence 233444332 11 12 122333444444433 3566788998888766555543 4 233556677889999
Q ss_pred HHHhCCceeeecceecC-CCccchHHHHHHHHHHHHHHHHHhhcCceee
Q psy196 177 ICQASRIVPIVEPEVLP-DGAHDLARCQKVTEAVLASVVKALHDHNVYL 224 (364)
Q Consensus 177 icQ~~GLVPIVEPEVl~-dg~h~i~~~~~vte~vL~~v~~~L~~~~V~L 224 (364)
.|-+++|+=|+||=+.. ++... +.-+++.-....+-.+.+.+-||.+
T Consensus 155 ec~aedi~f~lE~ltyd~~~~d~-~eyak~kp~kV~~a~k~fsd~Gadv 202 (306)
T COG3684 155 ECHAEDLPFFLEPLTYDPRIGDK-EEYAKRKPQKVIEAMKEFSDSGADV 202 (306)
T ss_pred HhhhcCCceeEeeeecCCCCCCh-HHHHhhchHHHHHHHHHhccCCCce
Confidence 99999999999998743 44433 3444454222333355566666653
No 19
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=44.62 E-value=2.1e+02 Score=24.76 Aligned_cols=65 Identities=22% Similarity=0.164 Sum_probs=43.5
Q ss_pred hhhHHHHHHHhhhCCCccceeeeeeecC-----CCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCc
Q psy196 128 LDDLAKRCDKYKTDGCHFAKWRCVLKIG-----DHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGA 196 (364)
Q Consensus 128 LD~L~~R~~~y~~~GarFaKWRaVi~i~-----~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~ 196 (364)
++.+.+-+...+.+|++. -++..+ ...........-+..|.+.+.++.+.|+...+||.--...+
T Consensus 70 ~~~~~~~i~~a~~lg~~~----i~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~ 139 (213)
T PF01261_consen 70 LEYLKKAIDLAKRLGAKY----IVVHSGRYPSGPEDDTEENWERLAENLRELAEIAEEYGVRIALENHPGPFSE 139 (213)
T ss_dssp HHHHHHHHHHHHHHTBSE----EEEECTTESSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SSSSSSS
T ss_pred HHHHHHHHHHHHHhCCCc----eeecCcccccccCCCHHHHHHHHHHHHHHHHhhhhhhcceEEEecccCcccc
Confidence 666666666667778655 223322 22344566677777888888889999999999997766543
No 20
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally.
Probab=40.88 E-value=3.3e+02 Score=25.96 Aligned_cols=150 Identities=13% Similarity=0.154 Sum_probs=80.3
Q ss_pred HHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHH
Q psy196 133 KRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLAS 212 (364)
Q Consensus 133 ~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~ 212 (364)
...++..+.||..-..|.-+ +.. +. .+....+++=.++|.+.|+.=||..+ .+|.|.-.. +...+..
T Consensus 94 ~~v~~al~~Ga~~v~~~~~~--g~~--~~---~~~~~~~~~i~~~~~~~g~~liv~~~--~~Gvh~~~~----~~~~~~~ 160 (258)
T TIGR01949 94 TTVEDAIRMGADAVSIHVNV--GSD--TE---WEQIRDLGMIAEICDDWGVPLLAMMY--PRGPHIDDR----DPELVAH 160 (258)
T ss_pred eeHHHHHHCCCCEEEEEEec--CCc--hH---HHHHHHHHHHHHHHHHcCCCEEEEEe--ccCcccccc----cHHHHHH
Confidence 34555568898776666443 221 11 22334455556899999976666333 678874221 1111222
Q ss_pred HHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCC-CCCceEEEcCCCCC---HHHHHHHHHHhh
Q psy196 213 VVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLP-VAVPGVVFLSGGQT---EEEASVHLNAIN 288 (364)
Q Consensus 213 v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP-~aVpgVvFLSGGqs---~eeAt~~LnaiN 288 (364)
..+...+.|++.=++ +. + .+++. |++.+. ..+| | +.+||-+ .+++-+|+..+-
T Consensus 161 ~~~~a~~~GADyikt----~~--~-------~~~~~--------l~~~~~~~~iP-V-va~GGi~~~~~~~~~~~i~~~~ 217 (258)
T TIGR01949 161 AARLGAELGADIVKT----PY--T-------GDIDS--------FRDVVKGCPAP-V-VVAGGPKTNSDREFLQMIKDAM 217 (258)
T ss_pred HHHHHHHHCCCEEec----cC--C-------CCHHH--------HHHHHHhCCCc-E-EEecCCCCCCHHHHHHHHHHHH
Confidence 122333455544332 21 1 12222 222222 2344 3 3379995 788888887655
Q ss_pred cccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHH
Q psy196 289 QTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARA 332 (364)
Q Consensus 289 ~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra 332 (364)
+. +- =.+|.||++.+ .+|..++-++|..--
T Consensus 218 ~a-Ga----~Gia~g~~i~~---------~~dp~~~~~~l~~~i 247 (258)
T TIGR01949 218 EA-GA----AGVAVGRNIFQ---------HDDPVGITKAVCKIV 247 (258)
T ss_pred Hc-CC----cEEehhhHhhc---------CCCHHHHHHHHHHHH
Confidence 43 21 27889999875 357888888777543
No 21
>KOG0742|consensus
Probab=38.40 E-value=22 Score=38.02 Aligned_cols=69 Identities=20% Similarity=0.301 Sum_probs=49.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCC--CChhhHHHhhhhhcccCCCCCC
Q psy196 4 HFNYL-SPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVE--NTEENRRLYRQLLFTTDHELGE 72 (364)
Q Consensus 4 ~~~~~-~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gve--nteenrr~yR~~l~tt~~~~~~ 72 (364)
.|||. +-+.-+.=....+.+.+.||+-|--==-..++.||++.+-+. ||..++.-||.+||--|||.++
T Consensus 326 ~~pw~gsls~~k~~i~~~~~~s~~gk~pl~~ViL~psLe~Rie~lA~aTaNTK~h~apfRNilfyGPPGTGK 397 (630)
T KOG0742|consen 326 RFPWIGSLSALKHPIQGSRSASSRGKDPLEGVILHPSLEKRIEDLAIATANTKKHQAPFRNILFYGPPGTGK 397 (630)
T ss_pred cCCCcccHHHHhchhhhhHhhhhcCCCCcCCeecCHHHHHHHHHHHHHhcccccccchhhheeeeCCCCCCc
Confidence 46777 444444444557888889998331111257889999987654 8999999999999999998864
No 22
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=37.23 E-value=2.1e+02 Score=26.73 Aligned_cols=150 Identities=19% Similarity=0.242 Sum_probs=75.4
Q ss_pred HHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCcc-chHHHHHHHHHHH
Q psy196 132 AKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAH-DLARCQKVTEAVL 210 (364)
Q Consensus 132 ~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h-~i~~~~~vte~vL 210 (364)
..-+.++.++||.--+ .|+.++...+.. -..+...+++..+.|+..||-=|+||... +.. +-+. ...++
T Consensus 79 ~~~ve~A~~~GAd~vd--~vi~~~~~~~~~--~~~~~~~i~~v~~~~~~~gl~vIlE~~l~--~~~~~~~~----~~~~I 148 (236)
T PF01791_consen 79 VAEVEEAIRLGADEVD--VVINYGALGSGN--EDEVIEEIAAVVEECHKYGLKVILEPYLR--GEEVADEK----KPDLI 148 (236)
T ss_dssp HHHHHHHHHTT-SEEE--EEEEHHHHHTTH--HHHHHHHHHHHHHHHHTSEEEEEEEECEC--HHHBSSTT----HHHHH
T ss_pred HHHHHHHHHcCCceee--eecccccccccc--HHHHHHHHHHHHHHHhcCCcEEEEEEecC--chhhcccc----cHHHH
Confidence 5567788899985444 455552111222 46678889999999999999999996543 221 0000 11122
Q ss_pred HHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCC-CCCce-E-EEcCCCCCHHHHHHHHHHh
Q psy196 211 ASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLP-VAVPG-V-VFLSGGQTEEEASVHLNAI 287 (364)
Q Consensus 211 ~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP-~aVpg-V-vFLSGGqs~eeAt~~Lnai 287 (364)
....+...+.|.++ +|-+.-.+ ...+.+++... ++.+. ..+|+ + |.+|||-+.++--..|+..
T Consensus 149 ~~a~ria~e~GaD~----vKt~tg~~-----~~~t~~~~~~~-----~~~~~~~~~p~~~~Vk~sGGi~~~~~~~~l~~a 214 (236)
T PF01791_consen 149 ARAARIAAELGADF----VKTSTGKP-----VGATPEDVELM-----RKAVEAAPVPGKVGVKASGGIDAEDFLRTLEDA 214 (236)
T ss_dssp HHHHHHHHHTT-SE----EEEE-SSS-----SCSHHHHHHHH-----HHHHHTHSSTTTSEEEEESSSSHHHHHHSHHHH
T ss_pred HHHHHHHHHhCCCE----EEecCCcc-----ccccHHHHHHH-----HHHHHhcCCCcceEEEEeCCCChHHHHHHHHHH
Confidence 22233334455544 44433211 34455555432 22222 11332 2 5788886444333333322
Q ss_pred hcc--cCCCCCeeEEeehhhhh
Q psy196 288 NQT--QALTPWALSFSYGRALQ 307 (364)
Q Consensus 288 N~~--~~~~PW~lsFSfgRALq 307 (364)
.++ .+- =...+|+||.+=
T Consensus 215 ~~~i~aGa--~~~G~~~Gr~i~ 234 (236)
T PF01791_consen 215 LEFIEAGA--DRIGTSSGRNIW 234 (236)
T ss_dssp HHHHHTTH--SEEEEEEHHHHH
T ss_pred HHHHHcCC--hhHHHHHHHHHH
Confidence 210 110 028899999864
No 23
>PF09863 DUF2090: Uncharacterized protein conserved in bacteria (DUF2090); InterPro: IPR018659 This domain, found in various prokaryotic carbohydrate kinases, has no known function.
Probab=35.90 E-value=4.9e+02 Score=26.59 Aligned_cols=189 Identities=24% Similarity=0.312 Sum_probs=117.8
Q ss_pred eeccccccccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceee--eeeec-
Q psy196 78 ILFHDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWR--CVLKI- 154 (364)
Q Consensus 78 ILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWR--aVi~i- 154 (364)
||-|+|+.|.. -.-...+|...|-=| .+||+..- .-++=+++..++. -|- -|+|.
T Consensus 89 iL~D~~~Gqda------L~~atg~G~WIgRPv-----E~pgSrPL-~fE~G~digs~L~----------~WP~ehvVKcL 146 (311)
T PF09863_consen 89 ILCDGRYGQDA------LNAATGRGWWIGRPV-----ELPGSRPL-RFEHGRDIGSQLI----------EWPQEHVVKCL 146 (311)
T ss_pred EEeecchhHHH------HHHHhcCCCeEEeec-----ccCCCCce-eeecCcCHHHHHH----------hCCcccEEEEE
Confidence 78889998743 333457888877654 45664321 1223345544443 342 24443
Q ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHHhCCc---eeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecc
Q psy196 155 ----GDHTPSALAILENANVLARYASICQASRI---VPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGI 227 (364)
Q Consensus 155 ----~~~~Ps~~aI~~na~~LArYA~icQ~~GL---VPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~Legt 227 (364)
.++.|... .+|...|.+-...|+++|. +=|+=|... +.+ ..++....+.+++.||
T Consensus 147 vfyHPdD~~~lr--~~Qe~~l~~l~~ac~~sg~ElLLEvI~p~~~---~~~--------~~~~~~ai~r~Y~lGI----- 208 (311)
T PF09863_consen 147 VFYHPDDDPELR--LEQEAQLRRLYDACRRSGHELLLEVIPPKDM---PVD--------DDTYARAIERFYNLGI----- 208 (311)
T ss_pred eecCCCCCHHHH--HHHHHHHHHHHHHHHhcCcceeEEEecCCCC---CCC--------hHHHHHHHHHHHHcCC-----
Confidence 23433333 5677888888889999995 445555542 222 2234445677788885
Q ss_pred cccCCccC-CCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhh
Q psy196 228 LLKPNMVT-PGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRAL 306 (364)
Q Consensus 228 lLKpnmV~-pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRAL 306 (364)
||.... |+.+ .+ +-..+..+-+.--|.+-|||.|==+.++|+-..=+++-- ..||--.|--||.+
T Consensus 209 --~PDWWKLep~s------~~--~W~~i~~~I~~~Dp~crGvVvLGLdAP~e~L~~~F~~Aa----~~p~vkGFAVGRTI 274 (311)
T PF09863_consen 209 --KPDWWKLEPLS------AA--AWQAIEALIEERDPYCRGVVVLGLDAPEEELAAGFAAAA----GSPLVKGFAVGRTI 274 (311)
T ss_pred --CCCeeccCCCC------HH--HHHHHHHHHHHhCCCceeEEEecCCCCHHHHHHHHHHhh----CCCceeeeeechhh
Confidence 455443 3331 11 222334444455688889999999999998888777532 36999999999999
Q ss_pred hHHHHHhhcCCCCC
Q psy196 307 QASVLRAWGGRPGN 320 (364)
Q Consensus 307 q~s~L~~W~G~~~n 320 (364)
=..+.+.|-...=+
T Consensus 275 F~~~sr~Wl~g~i~ 288 (311)
T PF09863_consen 275 FGEPSRAWLAGEID 288 (311)
T ss_pred hHHHHHHHHcCCCC
Confidence 99999999865544
No 24
>PF08742 C8: C8 domain; InterPro: IPR014853 The proteins in this entry contained a domain rich in positionally conserved cysteine residues. Most proteins contains 7 or 8 cysteine residues. The domain is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing IPR001846 from INTERPRO and IPR002919 from INTERPRO.
Probab=35.77 E-value=28 Score=26.77 Aligned_cols=18 Identities=33% Similarity=0.541 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhCCcee
Q psy196 168 ANVLARYASICQASRIVP 185 (364)
Q Consensus 168 a~~LArYA~icQ~~GLVP 185 (364)
..+|+-||+.|+..|+++
T Consensus 47 C~~l~~Ya~~C~~~g~~~ 64 (74)
T PF08742_consen 47 CEALSAYARECQRAGICV 64 (74)
T ss_pred hHHHHHHHHHHHHCcCCC
Confidence 789999999999999864
No 25
>TIGR01227 hutG formimidoylglutamase. Formiminoglutamase, the fourth enzyme of histidine degradation, is similar to arginases and agmatinases. It is often encoded near other enzymes of the histidine degredation pathway: histidine ammonia-lyase, urocanate hydratase, and imidazolonepropionase.
Probab=33.41 E-value=1.7e+02 Score=28.71 Aligned_cols=88 Identities=20% Similarity=0.310 Sum_probs=53.6
Q ss_pred CeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceee-eeeecCCCCccHHHHHHHHHHHHHHHHHHHhC
Q psy196 103 IIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWR-CVLKIGDHTPSALAILENANVLARYASICQAS 181 (364)
Q Consensus 103 IvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWR-aVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~ 181 (364)
.|.|+-.|.|...-.+.+| .-.|=+.+++-...+...+ |. .+...++-......+.+....++...+-..+.
T Consensus 38 ~iiGvP~d~g~~~n~~r~G--~~~gP~aiR~a~~~~~~~~-----~~~~i~D~Gdv~~~~~~~~~~~~~i~~~v~~~~~~ 110 (307)
T TIGR01227 38 ALIGFPLDKGVIRNKGRRG--ARHGPSAIRQALAHLGDWH-----VSELLYDLGDIVIHGDDLEDTQHEIAQTAAALLAD 110 (307)
T ss_pred EEEeeccCccccCCCCCcC--hhHCHHHHHHHHHhccccC-----CCCEEEeCCCCccCchhHHHHHHHHHHHHHHHHhc
Confidence 4778888888763112222 1356677765554332111 11 24555542222234677778888777777889
Q ss_pred CceeeecceecCCCccchHHH
Q psy196 182 RIVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 182 GLVPIVEPEVl~dg~h~i~~~ 202 (364)
|.+||+ +-|||++.-.
T Consensus 111 g~~Pi~-----lGGdHsit~~ 126 (307)
T TIGR01227 111 HRVPVI-----LGGGHSIAYA 126 (307)
T ss_pred CCeEEE-----ECCcchhHHH
Confidence 999976 8999987655
No 26
>PF06169 DUF982: Protein of unknown function (DUF982); InterPro: IPR010385 This family consists of several hypothetical proteins from Rhizobium meliloti (Sinorhizobium meliloti), Rhizobium loti (Mesorhizobium loti) and Agrobacterium tumefaciens. The function of this family is unknown.; PDB: 2KPQ_A.
Probab=33.23 E-value=80 Score=25.08 Aligned_cols=52 Identities=27% Similarity=0.392 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHhhcccCCCCCee--EEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHHhccc
Q psy196 276 TEEEASVHLNAINQTQALTPWAL--SFSYGRALQASVLRAWGGRPGNVLAGQNELLARARANGC 337 (364)
Q Consensus 276 s~eeAt~~LnaiN~~~~~~PW~l--sFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~~n~~ 337 (364)
|..||...|- + -|+. .-+|.+|++. |+.+=.|. .-.+.|+++|..-|+..+.
T Consensus 19 s~~~A~~~L~--~------~WP~~~g~~y~~A~~a-C~~Al~g~-~~~e~AR~AFi~AA~eAgi 72 (76)
T PF06169_consen 19 SVRDAADFLL--D------EWPVRRGPAYRAALRA-CRAALDGR-KPPEDARRAFIAAAREAGI 72 (76)
T ss_dssp EHHHHHHHHH--H--------S---SHHHHHHHHH-HHHHHTT--S-HHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHH--c------cCCCCCCHHHHHHHHH-HHHHHcCC-CCHHHHHHHHHHHHHHcCC
Confidence 7789999993 1 2888 7789999998 88888885 3589999999999887653
No 27
>smart00832 C8 C8 domain. This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin.
Probab=32.78 E-value=33 Score=27.24 Aligned_cols=17 Identities=29% Similarity=0.659 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhCCce
Q psy196 168 ANVLARYASICQASRIV 184 (364)
Q Consensus 168 a~~LArYA~icQ~~GLV 184 (364)
...|+-||..|++.|+.
T Consensus 49 C~al~aYa~aC~~~Gv~ 65 (76)
T smart00832 49 CDALAAYAAACAEAGVC 65 (76)
T ss_pred CHHHHHHHHHHHHCcCc
Confidence 78999999999999964
No 28
>KOG4266|consensus
Probab=31.18 E-value=24 Score=39.22 Aligned_cols=88 Identities=24% Similarity=0.423 Sum_probs=57.8
Q ss_pred cCCCccchHHHHHHHHHHHHHHHHHhhcCceeee--------------cccccCCccCCCCccCCCCChHHHHHHHHHHh
Q psy196 192 LPDGAHDLARCQKVTEAVLASVVKALHDHNVYLE--------------GILLKPNMVTPGASCSEKYAPSDIALATVTAL 257 (364)
Q Consensus 192 l~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~Le--------------gtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l 257 (364)
+.+||| |.+- ....|.+|++.|-|+| |||| ||.+ ...+-||||+. |
T Consensus 641 DW~gDH-iHTN-------FrdMY~hLR~~GYyievLg~PfTCFdAsqYGtLL---mVD~----E~~yfpEEI~k-----L 700 (1033)
T KOG4266|consen 641 DWHGDH-IHTN-------FRDMYNHLRDAGYYIEVLGSPFTCFDASQYGTLL---MVDL----EDDYFPEEIEK-----L 700 (1033)
T ss_pred cccccc-cccc-------HHHHHHHHHhcceehhhhcCCceeccHhHCceEE---EEcc----ccccCHHHHHH-----H
Confidence 578898 5655 4457999999998887 6664 6666 44688999984 5
Q ss_pred hccCCCCCceEEEcCCCCCH-------------------HHHHHHHHHhhcccCCCCCeeEEe
Q psy196 258 QRTLPVAVPGVVFLSGGQTE-------------------EEASVHLNAINQTQALTPWALSFS 301 (364)
Q Consensus 258 ~rtvP~aVpgVvFLSGGqs~-------------------eeAt~~LnaiN~~~~~~PW~lsFS 301 (364)
++.|--.=.|+|..+-=|.. +.--+|.-|+|.+ .+||++-|+
T Consensus 701 r~dV~n~GL~lVvF~dWYNt~vM~K~kFfDeNTRqWWtPdTGGANIPALN~L--L~~fgiaFg 761 (1033)
T KOG4266|consen 701 RDDVINTGLGLVVFADWYNTDVMVKMKFFDENTRQWWTPDTGGANIPALNNL--LASFGIAFG 761 (1033)
T ss_pred HHHHHhcCceEEEEeccccceeeeeeeeeccCcceeccCCCCCcCcHhHHHH--Hhhhccccc
Confidence 66666655676666543321 1223567777743 467887765
No 29
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=30.88 E-value=1.7e+02 Score=27.63 Aligned_cols=54 Identities=20% Similarity=0.201 Sum_probs=35.7
Q ss_pred eee-ecccccCCccC----CCCccC-CCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHH
Q psy196 222 VYL-EGILLKPNMVT----PGASCS-EKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLN 285 (364)
Q Consensus 222 V~L-egtlLKpnmV~----pG~~~~-~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~Ln 285 (364)
+.+ -||++-+..+. .|.+.- .....++|.++..+. ||.++.|-.|.+|+..-+.
T Consensus 68 ~~vGaGTV~~~~~~~~a~~aGA~FivsP~~~~~v~~~~~~~----------~i~~iPG~~T~~E~~~A~~ 127 (213)
T PRK06552 68 VLIGAGTVLDAVTARLAILAGAQFIVSPSFNRETAKICNLY----------QIPYLPGCMTVTEIVTALE 127 (213)
T ss_pred eEEeeeeCCCHHHHHHHHHcCCCEEECCCCCHHHHHHHHHc----------CCCEECCcCCHHHHHHHHH
Confidence 444 48888877654 333322 123347888886653 8888889999998876654
No 30
>KOG1749|consensus
Probab=30.45 E-value=29 Score=30.98 Aligned_cols=84 Identities=25% Similarity=0.334 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHh-----cCCCCceEeecCCCCchHHHhhhcCCCCCh---hhHHHhhhhhcccCCCCCCceEEeeecc
Q psy196 10 PELQAELKLIAETL-----VEPGKGILAADESVSTMGKRLADIGVENTE---ENRRLYRQLLFTTDHELGESISGVILFH 81 (364)
Q Consensus 10 ~~~~~eL~~~A~~~-----~a~gKGiLAaDES~gt~~Krl~~~Gvente---enrr~yR~~l~tt~~~~~~~IsGvILfe 81 (364)
.++++.+..||-+- ....|||. |+++|||.-. .-|...|--|+.. ++.|..++-+|
T Consensus 25 ~~ykk~~lGta~K~~pfggashAKgIv------------LEKigVEAKQPNSAiRKcvRvQLIkn----gKKITafVp~d 88 (143)
T KOG1749|consen 25 KHYKKRLLGTAYKSSPFGGASHAKGIV------------LEKIGVEAKQPNSAIRKCVRVQLIKN----GKKITAFVPND 88 (143)
T ss_pred hhhhhhhhcchhhcCCCCCccccceeE------------EEeeeeeccCCcHHHhhheeeeeeeC----CceEEEEecCC
Confidence 34555555555443 34568888 9999999544 4578899888876 78999988888
Q ss_pred ccccccccCCcchHHHH----hhCCCeeeEec
Q psy196 82 DTLYEKADDGTPFVELL----RQRGIIPGIKV 109 (364)
Q Consensus 82 ETl~q~~~~G~~~~~~L----~~~GIvpGIKv 109 (364)
-.+.=-..+..-++.-. +..|=||||+.
T Consensus 89 gcln~ieendevlv~gfgrkg~avgdipgvrf 120 (143)
T KOG1749|consen 89 GCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120 (143)
T ss_pred CceeeeccCCeeeeeccCccCccccCCCceEE
Confidence 77654333322222222 36677888753
No 31
>PF10058 DUF2296: Predicted integral membrane metal-binding protein (DUF2296); InterPro: IPR019273 This domain, found mainly in the eukaryotic lunapark proteins, has no known function [].
Probab=29.32 E-value=7.3 Score=29.56 Aligned_cols=20 Identities=40% Similarity=0.640 Sum_probs=16.1
Q ss_pred HHHHHHH----hCCceeeecceec
Q psy196 173 RYASICQ----ASRIVPIVEPEVL 192 (364)
Q Consensus 173 rYA~icQ----~~GLVPIVEPEVl 192 (364)
|||-||+ .||++|..|++-+
T Consensus 20 r~aLIC~~C~~hNGla~~~~~~~i 43 (54)
T PF10058_consen 20 RYALICSKCFSHNGLAPKEEFEEI 43 (54)
T ss_pred ceeEECcccchhhcccccccCCce
Confidence 7889998 5899998777643
No 32
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=28.42 E-value=1.3e+02 Score=26.86 Aligned_cols=44 Identities=16% Similarity=0.379 Sum_probs=25.6
Q ss_pred HHHHHHhCCceeee---------ccee-cCCCccchHHHHH-HHHHHHHHHHHHhh
Q psy196 174 YASICQASRIVPIV---------EPEV-LPDGAHDLARCQK-VTEAVLASVVKALH 218 (364)
Q Consensus 174 YA~icQ~~GLVPIV---------EPEV-l~dg~h~i~~~~~-vte~vL~~v~~~L~ 218 (364)
+..+|++++ ||.| .||. ..||=|-=+.-++ .++.+..++.+.|+
T Consensus 134 ~~~~a~~~~-v~~id~~~~~~~~~~~~~~~DGiHpn~~Gy~~~A~~i~~~l~~~~~ 188 (191)
T PRK10528 134 YPKLAKEFD-IPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVN 188 (191)
T ss_pred HHHHHHHhC-CCccHHHHHhhccCHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 456788777 5543 2554 3599997555544 55555555555543
No 33
>PRK13773 formimidoylglutamase; Provisional
Probab=27.20 E-value=2.7e+02 Score=27.79 Aligned_cols=85 Identities=22% Similarity=0.255 Sum_probs=50.3
Q ss_pred CeeeEecCCCcc---cCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHH
Q psy196 103 IIPGIKVDKGVV---PLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQ 179 (364)
Q Consensus 103 IvpGIKvDkGl~---pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ 179 (364)
+|.|+-.|.|.. .-+|+ -.|=+.+++-...+.. +.-|+ +...++-......+.++...++.-.+-..
T Consensus 47 ~iiGvP~d~g~~~n~~r~G~-----~~gP~aIR~a~~~~~~----~~~~~-i~D~Gdv~~~~~~~~~~~~~i~~~v~~~~ 116 (324)
T PRK13773 47 VLLGFASDEGVRRNKGRVGA-----AAGPDALRGALGSLAL----HEPRR-VYDAGTVTVPGGDLEAGQERLGDAVSALL 116 (324)
T ss_pred EEEEeccccCCCCCCCCCCh-----hHCHHHHHHHHhhchh----ccCCe-EEeCCCcCCCCcCHHHHHHHHHHHHHHHH
Confidence 478999999984 33443 3456666544433211 11122 44444321111235566777776666677
Q ss_pred hCCceeeecceecCCCccchHHH
Q psy196 180 ASRIVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 180 ~~GLVPIVEPEVl~dg~h~i~~~ 202 (364)
+.|.+||| +-|||+|.-.
T Consensus 117 ~~g~~Piv-----LGGdHsit~g 134 (324)
T PRK13773 117 DAGHLPVV-----LGGGHETAFG 134 (324)
T ss_pred HCCCeeEE-----ECCchHHHHH
Confidence 89999954 9999998766
No 34
>PRK13776 formimidoylglutamase; Provisional
Probab=27.12 E-value=3.6e+02 Score=26.84 Aligned_cols=88 Identities=19% Similarity=0.218 Sum_probs=50.4
Q ss_pred CeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCC
Q psy196 103 IIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASR 182 (364)
Q Consensus 103 IvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~G 182 (364)
.|.|+-.|.|+.+-.+.+| .-.|=+.+++....+. + +..+ .+.-.++-.+....+.+....++.-.+-..+.|
T Consensus 45 ~iiGvP~d~g~~~n~~r~G--~r~gP~aiR~a~~~~~--~--~~~~-~i~D~Gdv~~~~~~~~~~~~~i~~~v~~i~~~g 117 (318)
T PRK13776 45 ALLGFACDAGVRRNQGRVG--AKHGPDAIRRALANLP--W--HGGR-AVVDAGDVVCEDDDLEAAQSRYAQRVHDLLDRG 117 (318)
T ss_pred EEEeeccccccCCCCCCcC--hhHCHHHHHHHhhccc--c--cCCC-eEEECCCCCCCcchHHHHHHHHHHHHHHHHhCC
Confidence 4778888888743112222 1246666765543321 0 1111 244445422222346666777776666667899
Q ss_pred ceeeecceecCCCccchHHH
Q psy196 183 IVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 183 LVPIVEPEVl~dg~h~i~~~ 202 (364)
.+||+ +-|||+|.-.
T Consensus 118 ~~Pi~-----lGGdHsit~g 132 (318)
T PRK13776 118 HLPIG-----LGGGHEIAWA 132 (318)
T ss_pred CeEEE-----EcCchHHHHH
Confidence 99965 8999998766
No 35
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=25.95 E-value=1.4e+02 Score=32.13 Aligned_cols=44 Identities=25% Similarity=0.222 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhc
Q psy196 246 PSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQ 289 (364)
Q Consensus 246 ~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~ 289 (364)
.+++...=..+..+.+-..||..+|||||-..---...+...+.
T Consensus 212 ~~~l~~~l~~sV~~r~~advpvg~~lSGGlDSS~Iaa~a~~~~~ 255 (542)
T COG0367 212 AEHLRSLLEDAVKRRLVADVPVGVFLSGGLDSSLIAAIAAEELG 255 (542)
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEEeCCCccHHHHHHHHHHhcc
Confidence 44454444455555556789999999999888777777777663
No 36
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO). Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B (6.3.5.4 from EC) catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase [].; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A 1Q15_D 1Q19_C 1CT9_C 3K32_F.
Probab=25.29 E-value=1.2e+02 Score=27.38 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=21.6
Q ss_pred HHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhc
Q psy196 254 VTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQ 289 (364)
Q Consensus 254 v~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~ 289 (364)
-+++.+.++...+-.++||||. |++.-+....+
T Consensus 7 ~~av~~rl~~~~~i~~~LSGGl---DSs~i~~~~~~ 39 (255)
T PF00733_consen 7 EEAVARRLRSDKPIGILLSGGL---DSSAIAALAAR 39 (255)
T ss_dssp HHHHHHHCGCTSEEEEE--SSH---HHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCh---hHHHHHHHHHH
Confidence 4566777778888889999994 55555555554
No 37
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=24.84 E-value=64 Score=29.36 Aligned_cols=47 Identities=28% Similarity=0.357 Sum_probs=33.1
Q ss_pred cccCCccCCCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCC
Q psy196 228 LLKPNMVTPGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQT 276 (364)
Q Consensus 228 lLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs 276 (364)
++|||++.+........|..++-++-++.|+..=+.. =+++=|.+..
T Consensus 3 ~IKpN~~~~~~~~~~~~T~P~vv~avv~~l~~~g~~~--i~i~e~~~~~ 49 (206)
T PF04015_consen 3 LIKPNFVNPGPPESGATTHPEVVRAVVEMLKEAGAKE--IIIAESPGSG 49 (206)
T ss_pred EEEeCCCCCCCCCCCccCCHHHHHHHHHHHHHcCCCc--eEEEeCCCcc
Confidence 6799999987644456788899999999998765422 2445555544
No 38
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=24.38 E-value=1.9e+02 Score=29.44 Aligned_cols=84 Identities=21% Similarity=0.315 Sum_probs=59.7
Q ss_pred CCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCC------CHHHHHHHHHHhhcccCCCCCeeEEeehhhh---
Q psy196 236 PGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQ------TEEEASVHLNAINQTQALTPWALSFSYGRAL--- 306 (364)
Q Consensus 236 pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGq------s~eeAt~~LnaiN~~~~~~PW~lsFSfgRAL--- 306 (364)
|-..++.+.++.-.| +-..++++-.|--=|.|+.|-||- ++++|-.+-..+|+...+.-|++-.||||=-
T Consensus 133 pi~Gs~h~Vt~~~lA-a~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~ 211 (329)
T COG3660 133 PINGSPHNVTSQRLA-ALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDT 211 (329)
T ss_pred eccCCCCcccHHHhh-hhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHH
Confidence 334445555544443 445666777798889999999995 5889999999999865556799999999953
Q ss_pred hHHHHHh---------hcCC--CCC
Q psy196 307 QASVLRA---------WGGR--PGN 320 (364)
Q Consensus 307 q~s~L~~---------W~G~--~~n 320 (364)
.++.|++ |.++ ..|
T Consensus 212 ~~s~l~~~l~s~~~i~w~~~d~g~N 236 (329)
T COG3660 212 VKSILKNNLNSSPGIVWNNEDTGYN 236 (329)
T ss_pred HHHHHHhccccCceeEeCCCCCCCC
Confidence 2335555 9888 456
No 39
>PRK15410 DgsA anti-repressor MtfA; Provisional
Probab=24.36 E-value=76 Score=31.37 Aligned_cols=69 Identities=19% Similarity=0.229 Sum_probs=50.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhc-CCCCChhhHH---Hhhh-hhcccCCCCCCceEEee
Q psy196 4 HFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADI-GVENTEENRR---LYRQ-LLFTTDHELGESISGVI 78 (364)
Q Consensus 4 ~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~-Gventeenrr---~yR~-~l~tt~~~~~~~IsGvI 78 (364)
+|..|+++.+..|+..+...++ .|+|... |++-|+++|- +.=. +++.-+-..-+.+.+||
T Consensus 27 fy~~Ls~~~~~~L~~~v~~FL~---------------eK~f~G~~glevTdemkv~IAAqAclpiL~lg~~~y~~~~~Il 91 (260)
T PRK15410 27 LLTPLTEQEQQKLVALAERFLQ---------------QKRLVPLQGLELDSLMSARIALLFCLPVLELGIEWLDGFHEVL 91 (260)
T ss_pred HHhcCCHHHHHHHHHHHHHHhc---------------cceEeCCCCceeCHHHHHHHHHHHHHHHhcCCchHhcCCCEEE
Confidence 5678999999999999998776 4666666 7999999982 2211 33343212347899999
Q ss_pred ecccccccc
Q psy196 79 LFHDTLYEK 87 (364)
Q Consensus 79 LfeETl~q~ 87 (364)
+|+.++.-.
T Consensus 92 vYP~~f~~~ 100 (260)
T PRK15410 92 IYPAPFVVD 100 (260)
T ss_pred EcCcccccC
Confidence 999999743
No 40
>PF06167 Peptidase_M90: Glucose-regulated metallo-peptidase M90; InterPro: IPR010384 MtfA (earlier known as YeeI) is a transcription factor that binds Mlc (make large colonies), itself a repressor of glucose and hence a protein important in regulation of the phosphoenolpyruvate:glucose-phosphotransferase (PtsG) system, the major glucose transporter in Escherichia coli. Mlc is a repressor of ptsG, and MtfA is found to bind and inactivate Mlc with high affinity []. The membrane-bound protein EIICBGlc encoded by the ptsG gene is the major glucose transporter in E. coli. ; PDB: 3DL1_A 3KHI_A.
Probab=24.15 E-value=62 Score=31.56 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=41.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhc-CCCCChhhHH----HhhhhhcccCCCCCCceEEe
Q psy196 3 THFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADI-GVENTEENRR----LYRQLLFTTDHELGESISGV 77 (364)
Q Consensus 3 ~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~-Gventeenrr----~yR~~l~tt~~~~~~~IsGv 77 (364)
.+|..|+++.+..|...+...++ .|+|... |++-|+++|- .-=-++|.-+...-+.+..|
T Consensus 36 p~y~~L~~~~~~~l~~~~~~Fl~---------------~K~f~g~~glevtdemkl~IAa~Acll~l~~~~~~y~~~~~I 100 (253)
T PF06167_consen 36 PFYRRLSPEEQRRLRQRVQLFLA---------------EKRFEGCGGLEVTDEMKLLIAAQACLLTLGLGLDWYDGWRTI 100 (253)
T ss_dssp GGGTT--HHHHHHHHHHHHHHHH---------------HSEEEE-TT----HHHHHHHHHHHHGGGTTT-GGGGTT-SEE
T ss_pred HHhhcCCHHHHHHHHHHHHHHhc---------------cCEEEecCCCcCCHHHHHHHHHHHHHHHcCCChhHhCCCcEE
Confidence 35778899999999999988776 5777777 6999999983 22234444444556788999
Q ss_pred eecccccccc
Q psy196 78 ILFHDTLYEK 87 (364)
Q Consensus 78 ILfeETl~q~ 87 (364)
|+|+.+++.+
T Consensus 101 liYP~~f~~~ 110 (253)
T PF06167_consen 101 LIYPDAFVSP 110 (253)
T ss_dssp EEESS-----
T ss_pred EEeCccccCC
Confidence 9999999754
No 41
>PRK13775 formimidoylglutamase; Provisional
Probab=23.84 E-value=3.1e+02 Score=27.36 Aligned_cols=85 Identities=24% Similarity=0.330 Sum_probs=50.2
Q ss_pred CeeeEecCCCcc---cCCCCCCCCcCCChhhHHHHHHHhh-hCCCccceeeeeeecCCCC-ccHHHHHHHHHHHHHHHHH
Q psy196 103 IIPGIKVDKGVV---PLAGTDGETTTQGLDDLAKRCDKYK-TDGCHFAKWRCVLKIGDHT-PSALAILENANVLARYASI 177 (364)
Q Consensus 103 IvpGIKvDkGl~---pl~g~~~e~~t~GLD~L~~R~~~y~-~~GarFaKWRaVi~i~~~~-Ps~~aI~~na~~LArYA~i 177 (364)
+|.|+-.|.|+. .-+|+ -.|=+.+++....|. ..|. . ..+...++-. |. ....+....|+.-.+-
T Consensus 49 ~iiGvP~d~g~~~n~~r~Ga-----~~gP~aIR~~l~~~~~~~~~---~-~~i~D~Gdv~~~~-~~~~~~~~~l~~~v~~ 118 (328)
T PRK13775 49 ALIGFKSDKGVYINNGRVGA-----VESPAAIRTQLAKFPWHLGN---Q-VMVYDVGNIDGPN-RSLEQLQNSLSKAIKR 118 (328)
T ss_pred EEEEeccccccCCCCCCcCh-----hHhHHHHHHHHhccccccCC---C-CEEEeCCCcCCCC-cCHHHHHHHHHHHHHH
Confidence 478899999984 33343 356777777654431 0111 0 1233344321 21 2234556666666666
Q ss_pred HHhCCceeeecceecCCCccchHHH
Q psy196 178 CQASRIVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 178 cQ~~GLVPIVEPEVl~dg~h~i~~~ 202 (364)
+.+.|.+||| +-|||+|.-.
T Consensus 119 ~~~~g~~Piv-----lGGdHsit~g 138 (328)
T PRK13775 119 MCDLNLKPIV-----LGGGHETAYG 138 (328)
T ss_pred HHhCCCeEEE-----EcCcHHHHHH
Confidence 7789999965 8999998766
No 42
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Rhizobium meliloti (Sinorhizobium meliloti), a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA [, ]. In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance []. The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr [].; PDB: 3BL5_B 2PG3_A.
Probab=23.39 E-value=60 Score=30.43 Aligned_cols=33 Identities=36% Similarity=0.681 Sum_probs=19.4
Q ss_pred EEEcCCCCCHHHHHHHHH-HhhcccCCCCCeeEEeehhh
Q psy196 268 VVFLSGGQTEEEASVHLN-AINQTQALTPWALSFSYGRA 305 (364)
Q Consensus 268 VvFLSGGqs~eeAt~~Ln-aiN~~~~~~PW~lsFSfgRA 305 (364)
||.+|||+ |+|.-|. +.++ +...+.|+|.||.-
T Consensus 3 vvl~SGG~---DSt~~l~~~~~~--~~~v~al~~~YGq~ 36 (209)
T PF06508_consen 3 VVLFSGGL---DSTTCLYWAKKE--GYEVYALTFDYGQR 36 (209)
T ss_dssp EEE--SSH---HHHHHHHHHHHH---SEEEEEEEESSST
T ss_pred EEEeCCCH---HHHHHHHHHHHc--CCeEEEEEEECCCC
Confidence 78899995 4444443 2232 23468999999975
No 43
>KOG2311|consensus
Probab=23.27 E-value=46 Score=36.27 Aligned_cols=68 Identities=19% Similarity=0.230 Sum_probs=42.9
Q ss_pred hhhcccCCCCCCceEEeeeccccccccccCCcchHHHHhhCCCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHH
Q psy196 61 QLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRC 135 (364)
Q Consensus 61 ~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~ 135 (364)
++|+..+......|.||.|+|+|-.....==..+...| +=++..|+.-+| |.-||.+++||-.-++++
T Consensus 149 dliv~~~~~~~~~~~gV~l~dgt~v~a~~VilTTGTFL-------~~~I~iGlk~~pAGRiGe~ps~~Lse~l~kl 217 (679)
T KOG2311|consen 149 DLIVEDPDDGHCVVSGVVLVDGTVVYAESVILTTGTFL-------RGQINIGLKTHPAGRIGEQPSIGLSETLQKL 217 (679)
T ss_pred heeeccCCCCceEEEEEEEecCcEeccceEEEeeccce-------eeEEeeccccccCccccCCcchHHHHHHHHh
Confidence 45666644445679999999999764321001112222 224555666677 899999999998877664
No 44
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=23.20 E-value=2.2e+02 Score=27.14 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHhhcCc
Q psy196 202 CQKVTEAVLASVVKALHDHN 221 (364)
Q Consensus 202 ~~~vte~vL~~v~~~L~~~~ 221 (364)
+.++.+.+...+.+++.+++
T Consensus 5 ~~~~~~~~~~~v~~~i~~~~ 24 (258)
T PRK10696 5 FNKLQKRLRRQVGQAIADFN 24 (258)
T ss_pred hhHHHHHHHHHHHHHHHHcC
Confidence 44556677778888888776
No 45
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=23.09 E-value=3.4e+02 Score=24.32 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=24.0
Q ss_pred CCChHHHHHHHHHHhhccCCCCC-ceEEEcCCCCCH
Q psy196 243 KYAPSDIALATVTALQRTLPVAV-PGVVFLSGGQTE 277 (364)
Q Consensus 243 ~~~~~evA~~Tv~~l~rtvP~aV-pgVvFLSGGqs~ 277 (364)
-.+++|+|++.+.++.... ..+ -.+..++||.+.
T Consensus 220 ~~~~~d~a~~~~~~~~~~~-~~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 220 FVTVDEVAETALFLASDAA-AGITGQAIVLDGGWTA 254 (255)
T ss_pred CcCHHHHHHHHHHHcCccc-cCccceEEEEcCcccc
Confidence 4678999999998887532 333 356788888764
No 46
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=22.34 E-value=7.1e+02 Score=24.03 Aligned_cols=168 Identities=16% Similarity=0.220 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCC-ceEeecCCCCc-------hHHHhh-hcCCCCC------hhhHHHhhhhhcccCCC
Q psy196 5 FNYLSPELQAELKLIAETLVEPGK-GILAADESVST-------MGKRLA-DIGVENT------EENRRLYRQLLFTTDHE 69 (364)
Q Consensus 5 ~~~~~~~~~~eL~~~A~~~~a~gK-GiLAaDES~gt-------~~Krl~-~~Gvent------eenrr~yR~~l~tt~~~ 69 (364)
+|..+.+-.+.|-++++.|..-+- .|-.+|-.+|+ +.+++. ..|++.- ..||.+.++.|... ..
T Consensus 6 ~PP~~~~~~~~l~~~~~~l~~~~pd~isvT~~~~~~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~-~~ 84 (272)
T TIGR00676 6 FPPKTDEGEENLWETVDRLSPLDPDFVSVTYGAGGSTRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREY-RE 84 (272)
T ss_pred ECcCCchhHHHHHHHHHHHhcCCCCEEEeccCCCCCcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHH-HH
Confidence 455655555788889998877654 44444866664 557777 5688822 34555555544332 11
Q ss_pred CCCceEEeee--------ccccccccccCCcchHHHHhhC-CCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhh
Q psy196 70 LGESISGVIL--------FHDTLYEKADDGTPFVELLRQR-GIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKT 140 (364)
Q Consensus 70 ~~~~IsGvIL--------feETl~q~~~~G~~~~~~L~~~-GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~ 140 (364)
.+ |..+.+ .++.-...-++...+.+++++. + .+.+--...|. |++. .+..+...+|+++-.+
T Consensus 85 ~G--i~nvL~l~GD~~~~~~~~~~~~f~~a~~Li~~i~~~~~---~f~ig~a~~Pe-ghp~---~~~~~~~~~~L~~K~~ 155 (272)
T TIGR00676 85 LG--IRHILALRGDPPKGEGTPTPGGFNYASELVEFIRNEFG---DFDIGVAAYPE-KHPE---APNLEEDIENLKRKVD 155 (272)
T ss_pred CC--CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcC---CeeEEEEeCCC-CCCC---CCCHHHHHHHHHHHHH
Confidence 11 111111 1101101112334455666653 3 23332333443 3333 3457777888998899
Q ss_pred CCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCc
Q psy196 141 DGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGA 196 (364)
Q Consensus 141 ~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~ 196 (364)
.||.|.==..+ =++..+.+|...|++.|+-.-|-|-|.+=..
T Consensus 156 aGA~f~iTQ~~--------------fd~~~~~~~~~~~~~~gi~~PIi~Gi~p~~s 197 (272)
T TIGR00676 156 AGADYAITQLF--------------FDNDDYYRFVDRCRAAGIDVPIIPGIMPITN 197 (272)
T ss_pred cCCCeEeeccc--------------cCHHHHHHHHHHHHHcCCCCCEecccCCcCC
Confidence 99865211111 1366777888999999865555677764433
No 47
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=21.76 E-value=1.4e+02 Score=27.62 Aligned_cols=20 Identities=45% Similarity=0.594 Sum_probs=14.0
Q ss_pred hccCCCCCceEEEcCCCCCH
Q psy196 258 QRTLPVAVPGVVFLSGGQTE 277 (364)
Q Consensus 258 ~rtvP~aVpgVvFLSGGqs~ 277 (364)
++....-+|-.++||||..-
T Consensus 9 ~~~~~~~~~v~~~LSGGlDS 28 (269)
T cd01991 9 RRRLRSDVPVGVLLSGGLDS 28 (269)
T ss_pred HHHhccCCceEEeecccHHH
Confidence 33456777788999999643
No 48
>COG5400 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.23 E-value=78 Score=29.94 Aligned_cols=104 Identities=22% Similarity=0.336 Sum_probs=68.8
Q ss_pred HHHHHHHhcCCCCceEee-cCCCC-chHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcc
Q psy196 16 LKLIAETLVEPGKGILAA-DESVS-TMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTP 93 (364)
Q Consensus 16 L~~~A~~~~a~gKGiLAa-DES~g-t~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~ 93 (364)
=.=+|+.|+..|.||+-. -++-+ -+.|.|+++|++|-- |+.- .+.+-+|.|+--=|-|||-|...
T Consensus 46 ~~YtaqEivdagh~FfG~Tsggla~vvEkaF~~yGlPnGY---------ilGe-EGSGAfIaGltYGeG~LytKn~g--- 112 (205)
T COG5400 46 QTYTAQEIVDAGHGFFGETSGGLAKVVEKAFQSYGLPNGY---------ILGE-EGSGAFIAGLTYGEGTLYTKNAG--- 112 (205)
T ss_pred ccccHHHHHHhcccccccccchHHHHHHHHHHhcCCCCce---------Eecc-ccccceEeeeeeccceEEecCCC---
Confidence 345789999999999965 33332 356899999999963 4554 78899999999999999987531
Q ss_pred hHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHh
Q psy196 94 FVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKY 138 (364)
Q Consensus 94 ~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y 138 (364)
--++.|.- |-|-.|=|=. |+.-|...-.||+...--.+|
T Consensus 113 ~h~vFWQG---PslGwD~GGq---gsRvmmLvYnL~~v~aly~Ry 151 (205)
T COG5400 113 DHKVFWQG---PSLGWDWGGQ---GSRVMMLVYNLDDVDALYRRY 151 (205)
T ss_pred CcceEeeC---CccccccCCC---ceEEEEEEecCCCHHHHHhhc
Confidence 12333321 3344444432 455566667777765544444
No 49
>PHA02513 V1 structural protein V1; Reviewed
Probab=20.88 E-value=93 Score=27.58 Aligned_cols=30 Identities=23% Similarity=0.496 Sum_probs=25.3
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHhccccccccc
Q psy196 311 LRAWGGRPGNVLAGQNELLARARANGCASLGHY 343 (364)
Q Consensus 311 L~~W~G~~~nv~~aQ~~~~~ra~~n~~A~~G~y 343 (364)
.++|.| |+-..-+.|.+-|++|-.-++|+-
T Consensus 35 ~qtwdg---nii~sa~~fveva~~npkltkge~ 64 (135)
T PHA02513 35 YQTWDG---NIISSARRFVEVAKANPKLTKGEG 64 (135)
T ss_pred HHhcCc---hHHHHHHHHHHHHhcCCccccccc
Confidence 457877 888888999999999998888753
No 50
>PRK13772 formimidoylglutamase; Provisional
Probab=20.73 E-value=3e+02 Score=27.26 Aligned_cols=88 Identities=20% Similarity=0.297 Sum_probs=50.0
Q ss_pred CeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCC
Q psy196 103 IIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASR 182 (364)
Q Consensus 103 IvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~G 182 (364)
+|.|+--|.|...=.+.+| .-.|=+.+++-...+...+. ..+.-.++-......+.+....++...+-..+.|
T Consensus 44 ~ilGvP~D~g~~~n~~r~G--ar~gP~aIR~as~~l~~~~~-----~~i~D~Gdv~~~~~~~~~~~~~i~~~v~~~~~~g 116 (314)
T PRK13772 44 VLLGFACDAGVRRNQGRAG--AAHGPREIRRALAGVPAHGL-----PALADAGDVVCDDGDLESAQAALAEVVAEVLAAG 116 (314)
T ss_pred EEEEeecCcccCcCCCCch--HhHhHHHHHHHHhcCCcCCC-----CeEEECCCCCcCCcCHHHHHHHHHHHHHHHHHCC
Confidence 3777777877632112222 23567777655543322221 1233444321112234556677776666677899
Q ss_pred ceeeecceecCCCccchHHH
Q psy196 183 IVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 183 LVPIVEPEVl~dg~h~i~~~ 202 (364)
.+||| +-|||+|.-.
T Consensus 117 ~~Piv-----lGGdHsit~g 131 (314)
T PRK13772 117 ARPLV-----LGGGHEVAWG 131 (314)
T ss_pred CEEEE-----EcCchHHHHh
Confidence 99965 8999997755
No 51
>cd00635 PLPDE_III_YBL036c_like Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.
Probab=20.53 E-value=6.7e+02 Score=23.05 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=51.7
Q ss_pred CeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhC
Q psy196 103 IIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQAS 181 (364)
Q Consensus 103 IvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~ 181 (364)
+-..||||+|..+-. |.+ + +-+..+.+++..+ ..-+.+.+........+.....++...+...+..+++.
T Consensus 117 ~~v~lkvdtG~~~~R~G~~---~-~~~~~~~~~i~~~-----~~l~~~Gi~sh~s~~~~~~~~~~~~~~~~~~~~~l~~~ 187 (222)
T cd00635 117 LDVLVQVNIGGEESKSGVA---P-EELEELLEEIAAL-----PNLRIRGLMTIAPLTEDPEEVRPYFRELRELRDELGAK 187 (222)
T ss_pred CcEEEEEecCCCCCCCCCC---H-HHHHHHHHHHHcC-----CCCcEEEEEEECCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 446899999964321 332 2 1244555554332 22345556555444445556788888888888888877
Q ss_pred C-ceeeecceecCCCccchH
Q psy196 182 R-IVPIVEPEVLPDGAHDLA 200 (364)
Q Consensus 182 G-LVPIVEPEVl~dg~h~i~ 200 (364)
| +.+ ++|.+.|..+.+
T Consensus 188 ~g~~~---~~is~G~t~~~~ 204 (222)
T cd00635 188 GGVNL---KELSMGMSGDFE 204 (222)
T ss_pred cCCCC---CEEECcccHhHH
Confidence 5 522 677888776654
No 52
>COG0285 FolC Folylpolyglutamate synthase [Coenzyme metabolism]
Probab=20.50 E-value=1.7e+02 Score=30.92 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=42.0
Q ss_pred EEEcCCCCCHHHHHHHHHHhhcccCCCCCeeE-EeehhhhhHHHHHhhcCCCCCHH-HHHHHHHHHHH
Q psy196 268 VVFLSGGQTEEEASVHLNAINQTQALTPWALS-FSYGRALQASVLRAWGGRPGNVL-AGQNELLARAR 333 (364)
Q Consensus 268 VvFLSGGqs~eeAt~~LnaiN~~~~~~PW~ls-FSfgRALq~s~L~~W~G~~~nv~-~aQ~~~~~ra~ 333 (364)
+.++.|-++..|...-|...... ..-|-++ |.+-||+-...|..-.+...++. ...+..+.+++
T Consensus 331 ~~~v~g~l~dKd~~~~l~~L~~~--~~~~~~~~~~~~ra~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 396 (427)
T COG0285 331 LTLVFGMLKDKDIAGMLAALLPI--VDEIYTTPLPWPRALDAEELLAFAGERGGVELDDVAEALELAL 396 (427)
T ss_pred eEEEEEeecCCCHHHHHHHhhcc--CcEEEEccCCCcccCCHHHHHHHHHhhcCCccccHHHHHHHHH
Confidence 67777777888888888777755 3346554 88888888888876666544442 44444555444
Done!