Query psy196
Match_columns 364
No_of_seqs 161 out of 710
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 20:40:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 4E-159 1E-163 1164.7 35.1 354 6-364 24-379 (379)
2 2pc4_A 41 kDa antigen, fructos 100.0 2E-157 6E-162 1153.9 36.1 361 1-364 5-369 (369)
3 2qap_A Fructose-1,6-bisphospha 100.0 2E-157 6E-162 1159.5 33.7 361 1-364 30-391 (391)
4 3mbd_A Fructose-bisphosphate a 100.0 1E-154 4E-159 1122.6 32.7 337 6-345 4-340 (342)
5 3bv4_A Fructose-bisphosphate a 100.0 2E-153 7E-158 1116.9 35.9 339 6-344 2-340 (341)
6 3mmt_A Fructose-bisphosphate a 100.0 2E-153 8E-158 1115.2 30.9 336 11-348 4-343 (347)
7 2iqt_A Fructose-bisphosphate a 100.0 1E-106 4E-111 775.9 20.9 259 18-316 6-275 (296)
8 3iv3_A Tagatose 1,6-diphosphat 96.9 0.034 1.2E-06 54.5 16.5 269 30-335 26-310 (332)
9 1to3_A Putative aldolase YIHT; 88.2 9.2 0.00031 36.4 13.9 149 135-312 114-263 (304)
10 3fst_A 5,10-methylenetetrahydr 80.8 14 0.00049 35.2 11.5 161 4-194 29-214 (304)
11 3apt_A Methylenetetrahydrofola 73.7 23 0.0008 33.7 10.8 167 4-194 19-211 (310)
12 1w8s_A FBP aldolase, fructose- 61.2 1E+02 0.0034 28.3 12.5 171 106-332 76-251 (263)
13 3sy1_A UPF0001 protein YGGS; e 35.9 1.6E+02 0.0055 26.8 9.0 101 90-202 105-212 (245)
14 2lmt_A Calmodulin-related prot 35.4 61 0.0021 25.7 5.4 48 5-56 1-48 (148)
15 2b8n_A Glycerate kinase, putat 32.8 75 0.0026 32.1 6.6 94 167-276 263-363 (429)
16 3b8i_A PA4872 oxaloacetate dec 32.3 75 0.0026 30.1 6.2 51 124-195 163-213 (287)
17 3khi_A Putative metal-dependen 31.0 35 0.0012 32.4 3.7 69 3-86 28-101 (267)
18 3fok_A Uncharacterized protein 29.7 3.9E+02 0.013 25.8 12.2 148 139-330 138-293 (307)
19 1j7q_A CAVP, calcium vector pr 27.7 98 0.0034 22.0 5.0 56 4-63 4-59 (86)
20 3i5g_B Myosin regulatory light 27.0 67 0.0023 26.2 4.4 48 6-57 8-55 (153)
21 1wdc_C Scallop myosin; calcium 26.6 1E+02 0.0035 24.0 5.2 50 6-59 1-52 (156)
22 3vni_A Xylose isomerase domain 25.5 3.1E+02 0.011 24.0 8.8 93 94-190 52-153 (294)
23 2ktg_A Calmodulin, putative; e 24.8 1.8E+02 0.0062 20.3 5.9 50 2-55 2-51 (85)
24 1dp7_P MHC class II transcript 23.2 45 0.0015 25.9 2.4 18 168-185 20-37 (76)
25 3ngf_A AP endonuclease, family 22.5 2.1E+02 0.0073 25.0 7.1 61 127-189 91-151 (269)
26 4do4_A Alpha-N-acetylgalactosa 22.5 86 0.0029 29.7 4.7 56 92-151 86-141 (400)
27 3i5g_C Myosin catalytic light 22.2 1.3E+02 0.0045 24.6 5.3 66 7-84 2-69 (159)
28 3glc_A Aldolase LSRF; TIM barr 22.2 5E+02 0.017 24.4 11.7 228 21-333 45-278 (295)
29 1nsj_A PRAI, phosphoribosyl an 22.0 43 0.0015 30.0 2.4 29 269-303 154-182 (205)
30 3qc0_A Sugar isomerase; TIM ba 21.1 2.3E+02 0.0079 24.3 7.0 61 126-190 80-144 (275)
31 2ovk_B RLC, myosin regulatory 20.4 1E+02 0.0035 24.0 4.1 49 4-56 6-54 (153)
32 1w7j_B Myosin light chain 1; m 20.0 1.2E+02 0.004 23.4 4.4 46 6-55 2-47 (151)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=4.1e-159 Score=1164.72 Aligned_cols=354 Identities=55% Similarity=0.867 Sum_probs=335.4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeecccccc
Q psy196 6 NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLY 85 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~ 85 (364)
.+++.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||+||||| |++++||||||||||||+
T Consensus 24 ~~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLfts-p~~~~~IsGvILFeETl~ 102 (379)
T 3kx6_A 24 VKLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTT-KGLGKYISGCILFEETLF 102 (379)
T ss_dssp SSCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEECHHHHT
T ss_pred hhcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcC-cccccceeEEEcchhhcc
Confidence 4679999999999999999999999999999999999999999999999999999999999 678899999999999999
Q ss_pred ccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCC--CccHHH
Q psy196 86 EKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDH--TPSALA 163 (364)
Q Consensus 86 q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~--~Ps~~a 163 (364)
|+++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|+++ +||..+
T Consensus 103 Qk~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~a 182 (379)
T 3kx6_A 103 QQAPNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLS 182 (379)
T ss_dssp CBCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHH
T ss_pred ccccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999977 999999
Q ss_pred HHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCC
Q psy196 164 ILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEK 243 (364)
Q Consensus 164 I~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~ 243 (364)
|.+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||.+|+.+
T Consensus 183 I~ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k 262 (379)
T 3kx6_A 183 ILETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDK 262 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCC
T ss_pred HHHHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHH
Q psy196 244 YAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLA 323 (364)
Q Consensus 244 ~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~ 323 (364)
++++|||++||++|+||||++||||+|||||||+||||.||||||+++ ++||.||||||||||+|+||+|+||++||++
T Consensus 263 ~s~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~-~~PW~LsFSyGRALQ~s~LkaW~Gk~eNv~a 341 (379)
T 3kx6_A 263 PAPQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCN-KHPWSLSFSYGRALQSSVLKTWNGSMSNAAA 341 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHHHHHHHHHHTTCGGGHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhhcC-CCCcceeeechhhhchHHHHHHhcCchhHHH
Confidence 999999999999999999999999999999999999999999999985 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 324 GQNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 324 aQ~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
||++|++|||+||+|++|+|.++++ ++++||||+||+|
T Consensus 342 aQ~~l~~Ra~~Ns~A~~Gky~~~~~---~a~~sl~v~~~~y 379 (379)
T 3kx6_A 342 AQDVLMKLAQQNSEASLGSLKTDLS---DDGESLFEAKYIY 379 (379)
T ss_dssp HHHHHHHHHHHHHHHTTTCCC-----------------CCC
T ss_pred HHHHHHHHHHhhhHHhcCCcCCCcc---cccccccccCccC
Confidence 9999999999999999999998775 5689999999998
No 2
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=1.6e-157 Score=1153.94 Aligned_cols=361 Identities=54% Similarity=0.848 Sum_probs=346.4
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEee
Q psy196 1 MPTHF--NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVI 78 (364)
Q Consensus 1 ~~~~~--~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvI 78 (364)
|++++ |++++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||+||||| |++++||||||
T Consensus 5 ~~~~~~~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~ts-p~~~~~IsGvI 83 (369)
T 2pc4_A 5 TEYMNAPKKLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGT-KGLGKFISGAI 83 (369)
T ss_dssp CSCCSSCCCCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTC-TTCTTTEEEEE
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccC-CCcccceEEEE
Confidence 56677 8999999999999999999999999999999999999999999999999999999999999 56999999999
Q ss_pred eccccccccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCC--
Q psy196 79 LFHDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGD-- 156 (364)
Q Consensus 79 LfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~-- 156 (364)
||||||+|+++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|++
T Consensus 84 LfeETl~qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~ 163 (369)
T 2pc4_A 84 LFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAK 163 (369)
T ss_dssp ECHHHHTCBCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGG
T ss_pred cchHhccCcCcCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCC
Q psy196 157 HTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTP 236 (364)
Q Consensus 157 ~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~p 236 (364)
++||..+|.+|++.|||||+|||++||||||||||||||||||++|++||++||+++|++|++|+|||||||||||||+|
T Consensus 164 ~~PS~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~ 243 (369)
T 2pc4_A 164 GKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTA 243 (369)
T ss_dssp TBSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcC
Q psy196 237 GASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGG 316 (364)
Q Consensus 237 G~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G 316 (364)
|.+|+.+++++|||++||++|+|||||+||||+|||||||+||||.||||||+++ ++||.||||||||||+++|++|+|
T Consensus 244 G~~~~~k~s~e~vA~~Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~-~~PW~lsFSygRALq~~~lk~W~G 322 (369)
T 2pc4_A 244 GYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQG 322 (369)
T ss_dssp CTTCSSCCCHHHHHHHHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHHHHHHHHTTTT
T ss_pred cccccccCCHHHHHHHHHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCC-CCCceeEEehHHhhhhHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999986 789999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 317 RPGNVLAGQNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 317 ~~~nv~~aQ~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
|++||++||++|++|||+||+|++|+|.++. .+.++++||||+||+|
T Consensus 323 k~env~aaQ~~l~~ra~~n~~A~~G~y~~~~-~~~~~~~sl~v~~~~y 369 (369)
T 2pc4_A 323 KKENVAKAREVLLQRAEANSLATYGKYKGGA-GGENAGASLYEKKYVY 369 (369)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHTCCCCCC-C-----CCCCCCC---
T ss_pred ChHHHHHHHHHHHHHHHhhhHHhcCcccCCC-CccccccceeeccccC
Confidence 9999999999999999999999999997665 3445689999999998
No 3
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=1.6e-157 Score=1159.51 Aligned_cols=361 Identities=48% Similarity=0.774 Sum_probs=341.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeec
Q psy196 1 MPTHFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILF 80 (364)
Q Consensus 1 ~~~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILf 80 (364)
|++++|++++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||+||||| |++++||||||||
T Consensus 30 ~~~~~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~ts-p~~~~~IsGvILF 108 (391)
T 2qap_A 30 QLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEA-EGFEQYISGVILH 108 (391)
T ss_dssp GSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEEC
T ss_pred cccccccCCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecC-CCccCceEEEEcc
Confidence 577899999999999999999999999999999999999999999999999999999999999999 5699999999999
Q ss_pred cccccccccCCcchHHHHhhCCCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCc
Q psy196 81 HDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTP 159 (364)
Q Consensus 81 eETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~P 159 (364)
||||+|+++||+||+++|+++|||||||||||++||+ |+++|++|||||||++||++||++|||||||||||+|++++|
T Consensus 109 eETl~Qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~P 188 (391)
T 2qap_A 109 DETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTV 188 (391)
T ss_dssp HHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBC
T ss_pred hHhccCcCcCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCC
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCc
Q psy196 160 SALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGAS 239 (364)
Q Consensus 160 s~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~ 239 (364)
|..+|.+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|||||||||||||+||.+
T Consensus 189 S~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~ 268 (391)
T 2qap_A 189 SESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAE 268 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCC
Q psy196 240 CSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPG 319 (364)
Q Consensus 240 ~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~ 319 (364)
|+.+++|+|||++||++|+|||||+||||||||||||+||||.||||||+++.++||.||||||||||+|+||+|+||++
T Consensus 269 ~~~k~s~eevA~~Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRALq~s~LkaW~Gk~e 348 (391)
T 2qap_A 269 SGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSALKAWGGKES 348 (391)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHHHHHTTSGG
T ss_pred ccccCCHHHHHHHHHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHHhHHHHHHhcCCch
Confidence 99999999999999999999999999999999999999999999999999977889999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccccccccccCCcccCccCccccccccccC
Q psy196 320 NVLAGQNELLARARANGCASLGHYKAGAVKGVAGERDLFVKDHAY 364 (364)
Q Consensus 320 nv~~aQ~~~~~ra~~n~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 364 (364)
||++||++|++|||+||+|++|+|.++.+ .++++||||+||+|
T Consensus 349 Nv~aaQ~~l~~Ra~~Ns~A~~Gky~~~~~--~~~~~sl~v~~~~y 391 (391)
T 2qap_A 349 GLAAGRRAFLHRARMNSMAQLGKYKRSDD--DASSSSLYVKGNTY 391 (391)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCGGGC--C-------------
T ss_pred hHHHHHHHHHHHHHhchHhhCcccCCCCC--ccccCceeeccccC
Confidence 99999999999999999999999987665 35678999999998
No 4
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=1.2e-154 Score=1122.63 Aligned_cols=337 Identities=40% Similarity=0.683 Sum_probs=331.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeecccccc
Q psy196 6 NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLY 85 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~ 85 (364)
+.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||| |++++||||||||||||+
T Consensus 4 ~~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~ts-p~~~~~IsGvILfeETl~ 82 (342)
T 3mbd_A 4 SMMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFST-KGIERYIGGVILNQETFE 82 (342)
T ss_dssp --CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEECGGGGG
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcC-cccccceeEEEcchhhcc
Confidence 5689999999999999999999999999999999999999999999999999999999999 578899999999999999
Q ss_pred ccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHH
Q psy196 86 EKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAIL 165 (364)
Q Consensus 86 q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~ 165 (364)
|+++||+||+++|+++|||||||||||++|| +++|++|||||||++||++||++|||||||||||+|++++||..+|.
T Consensus 83 qk~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~ 160 (342)
T 3mbd_A 83 QTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCIN 160 (342)
T ss_dssp CBCTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHH
T ss_pred ccccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHH
Confidence 9999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCC
Q psy196 166 ENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYA 245 (364)
Q Consensus 166 ~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~ 245 (364)
+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||++|+.+++
T Consensus 161 ena~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s 240 (342)
T 3mbd_A 161 ENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYT 240 (342)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHH
Q psy196 246 PSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQ 325 (364)
Q Consensus 246 ~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ 325 (364)
++|||++||++|+||||++||||+|||||||+||||.||||||+++.++||.||||||||||+|+||+|+||++|+++||
T Consensus 241 ~eeVA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ 320 (342)
T 3mbd_A 241 PKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQ 320 (342)
T ss_dssp HHHHHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEecchhhhhHHHHHhcCCcccHHHHH
Confidence 99999999999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccccccC
Q psy196 326 NELLARARANGCASLGHYKA 345 (364)
Q Consensus 326 ~~~~~ra~~n~~A~~G~y~~ 345 (364)
++|++|||+||+|++|+|..
T Consensus 321 ~~l~~Ra~~N~~A~~Gky~~ 340 (342)
T 3mbd_A 321 KILLETSFKACRGAEGKLWD 340 (342)
T ss_dssp HHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHhhHHhCCCCcC
Confidence 99999999999999999974
No 5
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=2e-153 Score=1116.85 Aligned_cols=339 Identities=67% Similarity=1.074 Sum_probs=334.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeecccccc
Q psy196 6 NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLY 85 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~ 85 (364)
|.+++++++||.+||++|++|||||||||||+|||+|||++|||||||||||+||+||||||.++++||||||||||||+
T Consensus 2 ~~~~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~ 81 (341)
T 3bv4_A 2 PALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLY 81 (341)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhcc
Confidence 56789999999999999999999999999999999999999999999999999999999997779999999999999999
Q ss_pred ccccCCcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHH
Q psy196 86 EKADDGTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAIL 165 (364)
Q Consensus 86 q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~ 165 (364)
|+++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|++++||..+|.
T Consensus 82 qk~~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~ 161 (341)
T 3bv4_A 82 QKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIM 161 (341)
T ss_dssp CBCTTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHH
T ss_pred ccCcCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCC
Q psy196 166 ENANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYA 245 (364)
Q Consensus 166 ~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~ 245 (364)
+|++.|||||+|||++||||||||||||||||||++|++||++||+++|++|++|+|||||||||||||+||.+|+.+++
T Consensus 162 ~na~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~ 241 (341)
T 3bv4_A 162 ENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYS 241 (341)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCC
T ss_pred HHHHHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHH
Q psy196 246 PSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQ 325 (364)
Q Consensus 246 ~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ 325 (364)
++|||++||++|+|||||+||||||||||||+||||.||||||+++.++||.||||||||||+++||+|+||++||++||
T Consensus 242 ~e~va~~Tv~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRALq~~~lk~W~Gk~env~aaQ 321 (341)
T 3bv4_A 242 HEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQ 321 (341)
T ss_dssp HHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHHhHHHHHHhCCChhhHHHHH
Confidence 99999999999999999999999999999999999999999999877789999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccccc
Q psy196 326 NELLARARANGCASLGHYK 344 (364)
Q Consensus 326 ~~~~~ra~~n~~A~~G~y~ 344 (364)
++|++|||+||+|++|+|.
T Consensus 322 ~~l~~ra~~n~~A~~G~y~ 340 (341)
T 3bv4_A 322 EEYVKRALANSLACQGKYT 340 (341)
T ss_dssp HHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHhhhHHhcCcCC
Confidence 9999999999999999996
No 6
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=2.3e-153 Score=1115.20 Aligned_cols=336 Identities=50% Similarity=0.821 Sum_probs=330.5
Q ss_pred HHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccC
Q psy196 11 ELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADD 90 (364)
Q Consensus 11 ~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~ 90 (364)
.|.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||+|||||+|++++||||||||||||+|+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 36689999999999999999999999999999999999999999999999999999778899999999999999999999
Q ss_pred CcchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecC-CCCccHHHHHHHHH
Q psy196 91 GTPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIG-DHTPSALAILENAN 169 (364)
Q Consensus 91 G~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~-~~~Ps~~aI~~na~ 169 (364)
|+||+++|+++|||||||||||++||+|+++|++|||||||.+||++||++|||||||||||+|+ +++||..+|.+|++
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHHhCCceeeecceecCCC---ccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCCh
Q psy196 170 VLARYASICQASRIVPIVEPEVLPDG---AHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAP 246 (364)
Q Consensus 170 ~LArYA~icQ~~GLVPIVEPEVl~dg---~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~ 246 (364)
.|||||+|||++|||||||||||||| ||||++|++|||+||++||++|++|||+|||||||||||+||++ +.++++
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~-~~k~s~ 242 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKD-ARIASV 242 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTT-SCCCCH
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCC-CCcCCH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHH
Q psy196 247 SDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQN 326 (364)
Q Consensus 247 ~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~ 326 (364)
+|||++||+||+||||++||||+|||||||+||||.||||||++ .++||.||||||||||+|+||+|+||++||++||+
T Consensus 243 eevA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~-~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~ 321 (347)
T 3mmt_A 243 EEVAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNAL-GALPWKLTFSYGRALQAAALKAWAGKNENIVVAQK 321 (347)
T ss_dssp HHHHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTS-CCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHHHHhhCCcccCcceecCCCCCHHHHHHHHHHHhcC-CCCCeeeEeccchhhhHHHHHHhCCChhhHHHHHH
Confidence 99999999999999999999999999999999999999999997 67899999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccccCCcc
Q psy196 327 ELLARARANGCASLGHYKAGAV 348 (364)
Q Consensus 327 ~~~~ra~~n~~A~~G~y~~~~~ 348 (364)
+|++|||+||+|++|+|.++++
T Consensus 322 ~~~~Ra~~N~~A~~G~y~~~~e 343 (347)
T 3mmt_A 322 AFCHRARMNHLAALGQWTKDQE 343 (347)
T ss_dssp HHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHHhHHHHcCCcCcccc
Confidence 9999999999999999998876
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.1e-106 Score=775.87 Aligned_cols=259 Identities=26% Similarity=0.320 Sum_probs=243.1
Q ss_pred HHHHHhcCCCCceEee-cCCCCchHHHhhhcCCCCChhh--------HHHhhhhhcccCCCCCCceEEeeeccccccccc
Q psy196 18 LIAETLVEPGKGILAA-DESVSTMGKRLADIGVENTEEN--------RRLYRQLLFTTDHELGESISGVILFHDTLYEKA 88 (364)
Q Consensus 18 ~~A~~~~a~gKGiLAa-DES~gt~~Krl~~~Gventeen--------rr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~ 88 (364)
....+.++|||||||| |||+|||+|||++||||||||| ||+||++|||||.+.++||||||||||||+|++
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~ 85 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI 85 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC
Confidence 4556789999999987 9999999999999999999988 699999999996656999999999999999985
Q ss_pred cCCcchHHHH-hhCCCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHH
Q psy196 89 DDGTPFVELL-RQRGIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILE 166 (364)
Q Consensus 89 ~~G~~~~~~L-~~~GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~ 166 (364)
||+||+++| +++|||||||||||++||+ |+++|++|||||||++||++|+++| |||||||+|++ ..+|.+
T Consensus 86 -dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~----~~aI~~ 157 (296)
T 2iqt_A 86 -EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN----EQGIRD 157 (296)
T ss_dssp -TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC----HHHHHH
T ss_pred -CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc----hhHHHH
Confidence 999999999 6999999999999999999 9999999999999999999997666 99999999985 789999
Q ss_pred HHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCCh
Q psy196 167 NANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAP 246 (364)
Q Consensus 167 na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~ 246 (364)
|++.|||||+|||++||||||||||||||+ ||++|++||++||+++|++|++ +||||||| ||.+| ++
T Consensus 158 na~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~----~~ 224 (296)
T 2iqt_A 158 IVEQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN----FY 224 (296)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT----TT
T ss_pred HHHHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC----CH
Confidence 999999999999999999999999999999 9999999999999999999999 99999999 99998 67
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcC
Q psy196 247 SDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGG 316 (364)
Q Consensus 247 ~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G 316 (364)
++||+ ||+||||||||||||+||||.|||+|| .||||||||||++ |.+|+.
T Consensus 225 ~~va~----------ppaVpgVvfLSGGqSeeeAt~~L~a~n--------~l~fSfgRALq~~-l~~~q~ 275 (296)
T 2iqt_A 225 KEIIE----------HPMMLRVVALSGGYSREQANELLSRNH--------GVIASFSRALVEG-LSARQT 275 (296)
T ss_dssp HHHHT----------STTEEEEEEECTTCCHHHHHHHHTTST--------TCEEEESHHHHTT-CCTTSC
T ss_pred HhhcC----------CCCCCeeeeCCCCCCHHHHHHHHHhcC--------CcEEEeHHHhhCh-hhhccC
Confidence 88884 999999999999999999999999998 3899999999995 545554
No 8
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.87 E-value=0.034 Score=54.48 Aligned_cols=269 Identities=17% Similarity=0.162 Sum_probs=143.5
Q ss_pred eEeecCCCCchHHHhhhcCCC-CChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHHH-hhCCCeeeE
Q psy196 30 ILAADESVSTMGKRLADIGVE-NTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVELL-RQRGIIPGI 107 (364)
Q Consensus 30 iLAaDES~gt~~Krl~~~Gve-nteenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~L-~~~GIvpGI 107 (364)
|+|.|+. +++.+-++..|-. .+.+.-..+++++... +..+.+||+|.++ +.+.. .... .+.|++.++
T Consensus 26 ilA~DHR-~sl~~m~~~~~~~~~~~~~l~~~K~lv~~~---~~~~asaILlD~~-~G~~a------~~~~~~~~GLii~~ 94 (332)
T 3iv3_A 26 ALAFDQR-GALKCLMAQYQMKEPTVAQMEELKVLVSEE---LTPYASSILLDPE-YGLPA------AQARDREAGLLLAY 94 (332)
T ss_dssp EEEECCS-HHHHHHHHTTTTSCCCHHHHHHHHHHHHHH---HGGGSSEEEECTT-TCHHH------HHTSCTTCEEEEEC
T ss_pred EEEcCCh-hHHHHHHHhcCCCCCChHHHHHHHHHHHHH---HhcCCcEEEEchh-hCHHH------hccccCCCcEEEEe
Confidence 4455986 5667778777643 2344456777777543 4455777766554 43321 1112 577777666
Q ss_pred ecCC----CcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHH-HHHHHHHHHHHHHHHhCC
Q psy196 108 KVDK----GVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAI-LENANVLARYASICQASR 182 (364)
Q Consensus 108 KvDk----Gl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI-~~na~~LArYA~icQ~~G 182 (364)
++ ...+ |. .+..=++.-.+++ .++||..-|-=.-+..+ .+. .+ .++...|.|.+.-|++.|
T Consensus 95 --E~~G~~~~~~--gr---~p~~l~~~sve~a---~~~GADAVk~lv~~g~d--~~~--e~~~~q~~~l~rv~~ec~~~G 160 (332)
T 3iv3_A 95 --EKTGYDANTT--SR---LPDCLVDWSIKRL---KEAGADAVKFLLYYDVD--GDP--QVNVQKQAYIERIGSECQAED 160 (332)
T ss_dssp --BCCCCCTTSS--CC---CCCBCTTCCHHHH---HHTTCSEEEEEEEECTT--SCH--HHHHHHHHHHHHHHHHHHHHT
T ss_pred --ccCCCCcCCC--CC---CCccccccCHHHH---HHcCCCEEEEEEEcCCC--chH--HHHHHHHHHHHHHHHHHHHcC
Confidence 22 1111 10 0111122234455 57799888865444332 222 22 357788999999999999
Q ss_pred ceeeecceecC---CCccchHHHHHHHHHHHHHHHHHh--hcCceeeecccc--cCCccCCCC-ccCCCCChHHHHHHHH
Q psy196 183 IVPIVEPEVLP---DGAHDLARCQKVTEAVLASVVKAL--HDHNVYLEGILL--KPNMVTPGA-SCSEKYAPSDIALATV 254 (364)
Q Consensus 183 LVPIVEPEVl~---dg~h~i~~~~~vte~vL~~v~~~L--~~~~V~LegtlL--KpnmV~pG~-~~~~~~~~~evA~~Tv 254 (364)
+-=++||=.-. .++||.+-+ ++...++....+.+ .+.++++=-+-. -|++|- |. ++..-+|-++.++. +
T Consensus 161 iPlllEil~y~~~~~~~~~~~~a-~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~-g~~~~~~~y~~~ea~~~-f 237 (332)
T 3iv3_A 161 IPFFLEILTYDETISNNSSVEFA-KVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVE-GFAEGEVVYSKEEAAQA-F 237 (332)
T ss_dssp CCEEEEEEECBTTBSCTTSHHHH-TTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBT-TTCSSCCCBCHHHHHHH-H
T ss_pred CceEEEEeccCCCCCCCcchhhh-ccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhc-ccccccccccHHHHHHH-H
Confidence 97777774422 345664443 33444555556666 344655421111 223331 22 22234455554332 2
Q ss_pred HHhhccCCCCCceEEEcCCCCCHHHHHHHH-HHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 255 TALQRTLPVAVPGVVFLSGGQTEEEASVHL-NAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 255 ~~l~rtvP~aVpgVvFLSGGqs~eeAt~~L-naiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
+-+-... .| -++|||||-|.++--.-| .||-. + .+| -.++.||++=+++++.|..+. .+++++-|....+
T Consensus 238 ~~~~~a~--~~-P~v~lsgG~~~~~fl~~v~~A~~a--G-a~f-~Gv~~GRnvwq~~v~~~~~~~--~~~~~~~l~~~g~ 308 (332)
T 3iv3_A 238 REQEAST--DL-PYIYLSAGVSAELFQETLVFAHKA--G-AKF-NGVLCGRATWAGSVQVYMEEG--KEAARQWLRTSGL 308 (332)
T ss_dssp HHHHHTC--SS-CEEEECTTCCHHHHHHHHHHHHHH--T-CCC-CEEEECHHHHTTHHHHHHHHC--HHHHHHHHTTHHH
T ss_pred HHHHhcC--CC-CEEEECCCCCHHHHHHHHHHHHHc--C-CCc-ceEEeeHHHHHhhhhhhcccc--HHHHHHHHHHHhH
Confidence 2221222 23 378999999988777776 34432 1 011 478999999888888775422 2344444433343
Q ss_pred hc
Q psy196 334 AN 335 (364)
Q Consensus 334 ~n 335 (364)
.|
T Consensus 309 ~~ 310 (332)
T 3iv3_A 309 QN 310 (332)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 9
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=88.19 E-value=9.2 Score=36.38 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=82.2
Q ss_pred HHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchH-HHHHHHHHHHHHH
Q psy196 135 CDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDGAHDLA-RCQKVTEAVLASV 213 (364)
Q Consensus 135 ~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~-~~~~vte~vL~~v 213 (364)
..+..++||..-|-=..+. .+.|. .++-..+++-...|.+.|+-=||| +..+|.|--+ ... ...+...
T Consensus 114 ve~a~~~GAdaV~vlv~~~--~d~~~----~~~~~~i~~v~~~~~~~G~p~lv~--~~~~g~~v~~~~~~---~~~v~~a 182 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWR--SDEDA----QQRLNMVKEFNELCHSNGLLSIIE--PVVRPPRCGDKFDR---EQAIIDA 182 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEC--TTSCH----HHHHHHHHHHHHHHHTTTCEEEEE--EEECCCSSCSCCCH---HHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcC--CCccH----HHHHHHHHHHHHHHHHcCCcEEEE--EECCCCccccCCCh---hHHHHHH
Confidence 3344678998777333333 23333 556777888889999999988888 4444443100 000 0122222
Q ss_pred HHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCCHHHHHHHHHHhhcccCC
Q psy196 214 VKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQTEEEASVHLNAINQTQAL 293 (364)
Q Consensus 214 ~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs~eeAt~~LnaiN~~~~~ 293 (364)
.+...+.|++ ++|-....-+. .++++..+..-. +...+ .+| .|++|||-++++.-.++...-+.
T Consensus 183 a~~a~~lGaD----~iKv~~~~~~~-----g~~~~~~~vv~~-~~~~~--~~P-~Vv~aGG~~~~~~~~~~~~a~~a--- 246 (304)
T 1to3_A 183 AKELGDSGAD----LYKVEMPLYGK-----GARSDLLTASQR-LNGHI--NMP-WVILSSGVDEKLFPRAVRVAMEA--- 246 (304)
T ss_dssp HHHHTTSSCS----EEEECCGGGGC-----SCHHHHHHHHHH-HHHTC--CSC-EEECCTTSCTTTHHHHHHHHHHT---
T ss_pred HHHHHHcCCC----EEEeCCCcCCC-----CCHHHHHHHHHh-ccccC--CCC-eEEEecCCCHHHHHHHHHHHHHc---
Confidence 3444456665 34433311111 144554433222 11111 223 47899999988766666654332
Q ss_pred CCCeeEEeehhhhhHHHHH
Q psy196 294 TPWALSFSYGRALQASVLR 312 (364)
Q Consensus 294 ~PW~lsFSfgRALq~s~L~ 312 (364)
..-.|..||++-++.++
T Consensus 247 --Ga~Gv~vGRaI~q~~~~ 263 (304)
T 1to3_A 247 --GASGFLAGRAVWSSVIG 263 (304)
T ss_dssp --TCCEEEESHHHHGGGTT
T ss_pred --CCeEEEEehHHhCcccc
Confidence 46889999999887664
No 10
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=80.75 E-value=14 Score=35.24 Aligned_cols=161 Identities=16% Similarity=0.153 Sum_probs=93.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCC-ceEeecCCCCch-------HHHhh-hcCCC------CChhhHHHhhhhhcccC-
Q psy196 4 HFNYLSPELQAELKLIAETLVEPGK-GILAADESVSTM-------GKRLA-DIGVE------NTEENRRLYRQLLFTTD- 67 (364)
Q Consensus 4 ~~~~~~~~~~~eL~~~A~~~~a~gK-GiLAaDES~gt~-------~Krl~-~~Gve------nteenrr~yR~~l~tt~- 67 (364)
++|..+.+..+.|.+++++|..-+- .|-..|-.+|++ .+++. .+|++ ...-||.+.++.|....
T Consensus 29 ~fPPk~~~~~~~l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~ 108 (304)
T 3fst_A 29 FFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWN 108 (304)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHH
T ss_pred EcCCCCccHHHHHHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHH
Confidence 4788888888889999999987443 344448777763 34555 47888 22455555555554331
Q ss_pred CCC-------CCceEEeeeccccccccccCCcchHHHHhhCCCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhh
Q psy196 68 HEL-------GESISGVILFHDTLYEKADDGTPFVELLRQRGIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYK 139 (364)
Q Consensus 68 ~~~-------~~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~ 139 (364)
-|+ ++...+. + ....+...+++++++.+ +. +-|+.-.| |++. .+.++...+|+++-.
T Consensus 109 ~GI~nILaLrGDpp~~~---~----~~~~~A~dLv~~ir~~~---~f--~IgvA~yPE~Hp~---a~~~~~d~~~Lk~Kv 173 (304)
T 3fst_A 109 NGIRHIVALRGDLPPGS---G----KPEMYASDLVTLLKEVA---DF--DISVAAYPEVHPE---AKSAQADLLNLKRKV 173 (304)
T ss_dssp TTCCEEEEECCCCC-------------CCCHHHHHHHHHHHC---CC--EEEEEECTTCCTT---CSCHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCC---C----CCCCCHHHHHHHHHHcC---CC--eEEEEeCCCcCCC---CCCHHHHHHHHHHHH
Confidence 111 2222220 1 11223344667776543 22 22333333 4433 456777888999989
Q ss_pred hCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCc-eeeecceecCC
Q psy196 140 TDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRI-VPIVEPEVLPD 194 (364)
Q Consensus 140 ~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GL-VPIVEPEVl~d 194 (364)
+.||.| +++-- -. +.+.+-+|...|.+.|+ |||+ |-|++=
T Consensus 174 dAGAdf-----~iTQ~-ff--------D~~~~~~f~~~~r~~Gi~vPIi-~GImPi 214 (304)
T 3fst_A 174 DAGANR-----AITQF-FF--------DVESYLRFRDRCVSAGIDVEII-PGILPV 214 (304)
T ss_dssp HHTCCE-----EEECC-CS--------CHHHHHHHHHHHHHTTCCSCEE-CEECCC
T ss_pred HcCCCE-----EEeCc-cC--------CHHHHHHHHHHHHhcCCCCcEE-EEeccc
Confidence 999998 33321 01 25667788999999997 6654 777743
No 11
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=73.68 E-value=23 Score=33.65 Aligned_cols=167 Identities=19% Similarity=0.250 Sum_probs=96.5
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCC-CceEeecCCCCch-------HHHhhhcCCCCC------hhhHHHhhhhhcccCC-
Q psy196 4 HFNYLSPELQAELKLIAETLVEPG-KGILAADESVSTM-------GKRLADIGVENT------EENRRLYRQLLFTTDH- 68 (364)
Q Consensus 4 ~~~~~~~~~~~eL~~~A~~~~a~g-KGiLAaDES~gt~-------~Krl~~~Gvent------eenrr~yR~~l~tt~~- 68 (364)
.+|..+.+..+.|.+++++|..-+ .+|-..|=.+|++ .+++..+|++.- ..||.+.++.|.....
T Consensus 19 ~~PPk~~~~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~ 98 (310)
T 3apt_A 19 FFPPKDPEGEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVES 98 (310)
T ss_dssp ECCCSSHHHHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EeCCCCcchHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHC
Confidence 357777776778999999997633 6777778666662 466777898832 3555555555543311
Q ss_pred CCCCceE---Eeee-----ccccccccccCCcchHHHHhhC-CCeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHh
Q psy196 69 ELGESIS---GVIL-----FHDTLYEKADDGTPFVELLRQR-GIIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKY 138 (364)
Q Consensus 69 ~~~~~Is---GvIL-----feETl~q~~~~G~~~~~~L~~~-GIvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y 138 (364)
|+ +.|. |=.- |+..-.. -.+..-+++++++. |- ....|+.--| |++. .+.++...+++++-
T Consensus 99 GI-~niLaLrGD~p~~~g~~~~~~~~-f~~a~~Lv~~ir~~~g~----~f~igvA~yPE~Hp~---~~~~~~d~~~Lk~K 169 (310)
T 3apt_A 99 GV-ENLLALRGDPPRGERVFRPHPEG-FRYAAELVALIRERYGD----RVSVGGAAYPEGHPE---SESLEADLRHFKAK 169 (310)
T ss_dssp TC-CEEEEECCCCSTTCCSCCCCTTS-CSSHHHHHHHHHHHHGG----GSEEEEEECTTCCTT---SSCHHHHHHHHHHH
T ss_pred CC-CEEEEEcCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHhCCC----CeEEEEEeCCCcCCC---CCCHHHHHHHHHHH
Confidence 11 1111 1100 0010000 11333466777766 52 1222333333 4432 45688888899988
Q ss_pred hhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCc-eeeecceecCC
Q psy196 139 KTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRI-VPIVEPEVLPD 194 (364)
Q Consensus 139 ~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GL-VPIVEPEVl~d 194 (364)
.+.||.|.==..++ +...+-+|...|++.|+ |||+ |-|++=
T Consensus 170 v~aGAdf~iTQ~ff--------------D~~~~~~f~~~~r~~Gi~vPIi-~GImPi 211 (310)
T 3apt_A 170 VEAGLDFAITQLFF--------------NNAHYFGFLERARRAGIGIPIL-PGIMPV 211 (310)
T ss_dssp HHHHCSEEEECCCS--------------CHHHHHHHHHHHHHTTCCSCEE-CEECCC
T ss_pred HHcCCCEEEecccC--------------CHHHHHHHHHHHHHcCCCCeEE-EEeccc
Confidence 89999854332222 25677788999999997 6754 777743
No 12
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=61.24 E-value=1e+02 Score=28.34 Aligned_cols=171 Identities=16% Similarity=0.157 Sum_probs=91.8
Q ss_pred eEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCcee
Q psy196 106 GIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVP 185 (364)
Q Consensus 106 GIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVP 185 (364)
-+|+..+. .++|. .++.-+- ..+++..+.||..=++|.-++ +. +... .-..+++-...|.+.|+-=
T Consensus 76 iv~~~~~~-~~~g~---~~~~~~~---~~ve~Ai~~Ga~~v~~~~nig--~~--~~~~---~~~~~~~v~~~~~~~~~~v 141 (263)
T 1w8s_A 76 ILKLNGKT-TLYNG---EPVSVAN---CSVEEAVSLGASAVGYTIYPG--SG--FEWK---MFEELARIKRDAVKFDLPL 141 (263)
T ss_dssp EEECEECC-TTCCS---SCCCEES---SCHHHHHHTTCSEEEEEECTT--ST--THHH---HHHHHHHHHHHHHHHTCCE
T ss_pred EEEEeCCC-CcCCC---CccchHH---HHHHHHHHCCCCEEEEEEecC--Cc--CHHH---HHHHHHHHHHHHHHcCCeE
Confidence 36776665 23231 1333222 234444678999888865444 32 2333 3455555578899888655
Q ss_pred eecceecCCCccchH--HHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCCC
Q psy196 186 IVEPEVLPDGAHDLA--RCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLPV 263 (364)
Q Consensus 186 IVEPEVl~dg~h~i~--~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP~ 263 (364)
|+| ...+|.|--+ .+..+ .. ..+...+.|+++ +|-+. |+ +++.+. .+++.+ +
T Consensus 142 Ii~--~~~~G~~~~~~~s~~~i----~~-a~~~a~~~GAD~----vkt~~--~~-------~~e~~~-----~~~~~~-~ 195 (263)
T 1w8s_A 142 VVE--SFPRGGKVVNETAPEIV----AY-AARIALELGADA----MKIKY--TG-------DPKTFS-----WAVKVA-G 195 (263)
T ss_dssp EEE--ECCCSTTCCCTTCHHHH----HH-HHHHHHHHTCSE----EEEEC--CS-------SHHHHH-----HHHHHT-T
T ss_pred EEE--eeCCCCccccCCCHHHH----HH-HHHHHHHcCCCE----EEEcC--CC-------CHHHHH-----HHHHhC-C
Confidence 775 6677776211 11111 11 111122334433 44442 32 344444 334445 3
Q ss_pred CCceEEEcCCCC---CHHHHHHHHHHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHH
Q psy196 264 AVPGVVFLSGGQ---TEEEASVHLNAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARA 332 (364)
Q Consensus 264 aVpgVvFLSGGq---s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra 332 (364)
.+| |..|||- +.+++-+++...-+. +- =..|.||++-++ +|..++=++|.+.-
T Consensus 196 ~~p--V~asGGi~~~~~~~~l~~i~~~~~a-GA----~GvsvgraI~~~---------~dp~~~~~~l~~~v 251 (263)
T 1w8s_A 196 KVP--VLMSGGPKTKTEEDFLKQVEGVLEA-GA----LGIAVGRNVWQR---------RDALKFARALAELV 251 (263)
T ss_dssp TSC--EEEECCSCCSSHHHHHHHHHHHHHT-TC----CEEEESHHHHTS---------TTHHHHHHHHHHHH
T ss_pred CCe--EEEEeCCCCCCHHHHHHHHHHHHHc-CC----eEEEEehhhcCC---------cCHHHHHHHHHHHH
Confidence 356 6789998 578888888543322 22 278899998663 57777766666544
No 13
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=35.89 E-value=1.6e+02 Score=26.77 Aligned_cols=101 Identities=14% Similarity=0.027 Sum_probs=64.5
Q ss_pred CCcchHHHHh----hCC--CeeeEecCCCcccCC-CCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHH
Q psy196 90 DGTPFVELLR----QRG--IIPGIKVDKGVVPLA-GTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSAL 162 (364)
Q Consensus 90 ~G~~~~~~L~----~~G--IvpGIKvDkGl~pl~-g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~ 162 (364)
|-....+.|. +.| +=.-||||+|-.+-- |... +-+..+.+++.+ ...=+++-+..+....+...
T Consensus 105 ds~~~a~~l~~~a~~~~~~~~V~lqVntG~e~~R~G~~~----ee~~~l~~~i~~-----~~~l~l~Glmt~~~~~~d~~ 175 (245)
T 3sy1_A 105 DRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQL----AELDELAAAVAE-----LPRLRLRGLSAIPAPESEYV 175 (245)
T ss_dssp CCHHHHHHHHHHSCTTSCCEEEEEEBCCSCTTCCSSBCG----GGHHHHHHHHTT-----CTTEEEEEEECCCCCCSCHH
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEEEECCCCcCCcCCCH----HHHHHHHHHHHc-----CCCCeEEEEEEeCCCCCCHH
Confidence 4444555553 223 445799999965432 4331 245666665532 33467888888876556666
Q ss_pred HHHHHHHHHHHHHHHHHhCCceeeecceecCCCccchHHH
Q psy196 163 AILENANVLARYASICQASRIVPIVEPEVLPDGAHDLARC 202 (364)
Q Consensus 163 aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~ 202 (364)
.+.+....|...+...++.|. + -+++.|-+.+|.+.+
T Consensus 176 ~~~~~f~~l~~l~~~l~~~~~-~--~~~LSmGmS~d~~~A 212 (245)
T 3sy1_A 176 RQFEVARQMAVAFAGLKTRYP-H--IDTLALGQSDDMEAA 212 (245)
T ss_dssp HHHHHHHHHHHHHHHHHTTST-T--CCEEECCCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC-C--CCEEeccCcHhHHHH
Confidence 677777778777777777764 3 367888888887764
No 14
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=35.36 E-value=61 Score=25.69 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhH
Q psy196 5 FNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENR 56 (364)
Q Consensus 5 ~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenr 56 (364)
|+.||.++.++|++.=+.+=.+|.|.|-.+| +...|..+|...+++.-
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~E----l~~~l~~~~~~~~~~~~ 48 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRE----LGTLMRTLGQNPTEAEL 48 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGG----HHHHHHHHTCCCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHH----HHHHHHhcCCCchHHHH
Confidence 4568999999999999999999999998888 67888999998886543
No 15
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=32.76 E-value=75 Score=32.13 Aligned_cols=94 Identities=19% Similarity=0.250 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCC-
Q psy196 167 NANVLARYASICQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYA- 245 (364)
Q Consensus 167 na~~LArYA~icQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~- 245 (364)
|...|.--+..+++.|+-|+|=..- ++|+ +.+| .++++.+.+.+..++.- +-+|-.++.|-+.+....
T Consensus 263 n~~al~AAa~~A~~~G~~~~il~~~-l~Ge-----arev-g~~~a~ia~~~~~~~~p----~~~P~~llsGGEtTVtv~G 331 (429)
T 2b8n_A 263 VQKVCDEAKSLAKEKGFNAEIITTS-LDCE-----AREA-GRFIASIMKEVKFKDRP----LKKPAALIFGGETVVHVKG 331 (429)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE-ECSB-----HHHH-HHHHHHHHHHHHHHCCS----SCSSEEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHHHHHcCCeEEEecCC-Ccee-----HHHH-HHHHHHHHHHHHhcCCC----CCCCeEEEEcCCcEEEeCC
Confidence 5666666678889999988776653 3555 2223 44556666665544311 124445555555443332
Q ss_pred ------hHHHHHHHHHHhhccCCCCCceEEEcCCCCC
Q psy196 246 ------PSDIALATVTALQRTLPVAVPGVVFLSGGQT 276 (364)
Q Consensus 246 ------~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs 276 (364)
.+|.|-.-...|.. .++|+|||+|-.
T Consensus 332 ~G~GGRNqElaL~~a~~l~g-----~~~v~~ls~gTD 363 (429)
T 2b8n_A 332 NGIGGRNQELALSAAIALEG-----IEGVILCSAGTD 363 (429)
T ss_dssp CCCCCHHHHHHHHHHHHTTT-----CTTEEEEEEETT
T ss_pred CCCCchhHHHHHHHHHHhcC-----CCCeEEEEECCC
Confidence 57777665555543 358999998753
No 16
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=32.29 E-value=75 Score=30.13 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=34.6
Q ss_pred cCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCC
Q psy196 124 TTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPDG 195 (364)
Q Consensus 124 ~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dg 195 (364)
...|||++.+|++.|.+.||+ .|-+. ..|+..-+ .++|++-. +|++ ++..|
T Consensus 163 a~~gl~~ai~Ra~ay~eAGAd------~i~~e-~~~~~~~~----------~~i~~~~~-~P~i---i~~~g 213 (287)
T 3b8i_A 163 ELIDVDAVIQRTLAYQEAGAD------GICLV-GVRDFAHL----------EAIAEHLH-IPLM---LVTYG 213 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCS------EEEEE-CCCSHHHH----------HHHHTTCC-SCEE---EECTT
T ss_pred hhcCHHHHHHHHHHHHHcCCC------EEEec-CCCCHHHH----------HHHHHhCC-CCEE---EeCCC
Confidence 346899999999999999995 23332 34654332 46677665 7888 55443
No 17
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=30.97 E-value=35 Score=32.38 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=51.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhc-CCCCChhhHH---H-hhhhhcccCCCCCCceEEe
Q psy196 3 THFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADI-GVENTEENRR---L-YRQLLFTTDHELGESISGV 77 (364)
Q Consensus 3 ~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~-Gventeenrr---~-yR~~l~tt~~~~~~~IsGv 77 (364)
.+|..|+++.+..|+..+...++ .|+|... |++-|+++|- + -=-++|.-+...-+.+.+|
T Consensus 28 p~y~~L~~~e~~~L~~~~~~FL~---------------~K~f~g~~glevtdem~v~IAaqAcLpvL~l~~~~y~~~~~I 92 (267)
T 3khi_A 28 PVLAHLSSTEQHKLTQMAARFLQ---------------QKRLVALQGLELTPLHQARIAMLFCLPVLELGIEWLDGFHEV 92 (267)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHH---------------HCEEEECTTCCCCHHHHHHHHHHHHGGGTTTCGGGGTTCSEE
T ss_pred HHHhcCCHHHHHHHHHHHHHHHc---------------cCEEeccCCCccCHHHHHHHHHHHHHHHcCCCchHhCCCcEE
Confidence 46788999999999999998775 6788888 8999999983 2 2223454433455788999
Q ss_pred eeccccccc
Q psy196 78 ILFHDTLYE 86 (364)
Q Consensus 78 ILfeETl~q 86 (364)
|+|+.++.-
T Consensus 93 lvYP~~f~~ 101 (267)
T 3khi_A 93 LIYPAPFIV 101 (267)
T ss_dssp EEESSCC--
T ss_pred EEeCccccc
Confidence 999999974
No 18
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=29.66 E-value=3.9e+02 Score=25.77 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=83.8
Q ss_pred hhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecceecCC--C----ccchHHHHHHHHHHHHH
Q psy196 139 KTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEPEVLPD--G----AHDLARCQKVTEAVLAS 212 (364)
Q Consensus 139 ~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~d--g----~h~i~~~~~vte~vL~~ 212 (364)
..+||..-|.= +.|.-+-|.+ .++-..+++-..-|.+.||.=++||=+... | ++|.+.....
T Consensus 138 vrlGADaV~~l--~~i~~Gs~~e---~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~a------- 205 (307)
T 3fok_A 138 VDRGVDFAKTL--VRINLSDAGT---APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQS------- 205 (307)
T ss_dssp HHHTCCEEEEE--EEECTTCTTH---HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHH-------
T ss_pred HHCCCCEEEEE--EEECCCChhH---HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHH-------
Confidence 45699888863 3443333544 567888888899999999988998633221 1 3443322211
Q ss_pred HHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHhhccCCCCCceEEEcCCCCC--HHHHHHHHHHhhcc
Q psy196 213 VVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTALQRTLPVAVPGVVFLSGGQT--EEEASVHLNAINQT 290 (364)
Q Consensus 213 v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqs--~eeAt~~LnaiN~~ 290 (364)
.+--.+.|.+.--|++|-+.. + +.++|.++ .| +| |+++.|+-. +++.-+.+...=++
T Consensus 206 -aRiAaELGADs~~tivK~~y~----e-----~f~~Vv~a--------~~--vP-VViaGG~k~~~~~e~L~~v~~A~~~ 264 (307)
T 3fok_A 206 -VAIAAGLGNDSSYTWMKLPVV----E-----EMERVMES--------TT--MP-TLLLGGEGGNDPDATFASWEHALTL 264 (307)
T ss_dssp -HHHHHTCSSCCSSEEEEEECC----T-----THHHHGGG--------CS--SC-EEEECCSCC--CHHHHHHHHHHTTS
T ss_pred -HHHHHHhCCCcCCCEEEeCCc----H-----HHHHHHHh--------CC--CC-EEEeCCCCCCCHHHHHHHHHHHHHh
Confidence 122235565555567776543 1 23444322 22 33 667766653 45555555432211
Q ss_pred cCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHH
Q psy196 291 QALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLA 330 (364)
Q Consensus 291 ~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ 330 (364)
+=.-..++||.+ |+-..+|..++=+++..
T Consensus 265 ----aGa~Gv~vGRNI-------fQ~~~~dp~~~v~al~~ 293 (307)
T 3fok_A 265 ----PGVRGLTVGRTL-------LYPQDGDVAAAVDTAAR 293 (307)
T ss_dssp ----TTEEEEEECTTT-------SSCSSSCHHHHHHHHHH
T ss_pred ----CCCeEEeechhh-------ccCCCCCHHHHHHHHHH
Confidence 346778999986 44445677766655543
No 19
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=27.73 E-value=98 Score=21.96 Aligned_cols=56 Identities=16% Similarity=0.152 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhh
Q psy196 4 HFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLL 63 (364)
Q Consensus 4 ~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l 63 (364)
....+++++.++|...=+.+=.++.|.|-.+| +.+.|..+|...+++.....++++
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~e----l~~~l~~~g~~~~~~~~~~~~~~~ 59 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSD----TMDMLTKLGQTYTKRETEAIMKEA 59 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHH----HHHHHHHTSCCCSHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHH----HHHHHHHHcCCCCHHHHHHHHHHH
Confidence 34567888888999998888889999986655 567888899887776544455544
No 20
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=26.95 E-value=67 Score=26.23 Aligned_cols=48 Identities=15% Similarity=0.229 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhHH
Q psy196 6 NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENRR 57 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenrr 57 (364)
..||.++.++|++.=+.+=.+|.|.|-.+| +...|+++|...+++...
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~E----l~~~l~~lg~~~~~~~~~ 55 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMED----LKDMFSSLGRVPPDDELN 55 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHH----HHHHHHHTTSCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHH----HHHHHHHcCCCccHHHHH
Confidence 358999999999999999999999998777 788999999999886643
No 21
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=26.62 E-value=1e+02 Score=24.00 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CCCceEeecCCCCchHHHhhhcCCCCChhhHHHh
Q psy196 6 NYLSPELQAELKLIAETLVE--PGKGILAADESVSTMGKRLADIGVENTEENRRLY 59 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a--~gKGiLAaDES~gt~~Krl~~~Gventeenrr~y 59 (364)
+.+|+++..+|...=+.+=. ++.|.|-.+| +.+.|..+|+..+++.-..+
T Consensus 1 ~~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~e----l~~~l~~~g~~~~~~~~~~l 52 (156)
T 1wdc_C 1 PKLSQDEIDDLKDVFELFDFWDGRDGAVDAFK----LGDVCRCLGINPRNEDVFAV 52 (156)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTCSSSCEEGGG----HHHHHHHTTCCCCHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHccCCCCCCCCcHHH----HHHHHHHcCCCCCHHHHHHH
Confidence 35788999999999999988 9999997776 67888889988776654444
No 22
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=25.48 E-value=3.1e+02 Score=23.98 Aligned_cols=93 Identities=11% Similarity=0.015 Sum_probs=52.8
Q ss_pred hHHHHhhCCCeeeEecCCCc---ccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecC------CCCccHHHH
Q psy196 94 FVELLRQRGIIPGIKVDKGV---VPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIG------DHTPSALAI 164 (364)
Q Consensus 94 ~~~~L~~~GIvpGIKvDkGl---~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~------~~~Ps~~aI 164 (364)
+.+.+++.|+-+-. + .+. ..+.+.+.+.....++.+..-+....++||..-. .++..+ ...+....+
T Consensus 52 ~~~~l~~~gl~i~~-~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~--~~~~~~~~~~~~~~~~~~~~~ 127 (294)
T 3vni_A 52 LKACAHGNGITLTV-G-HGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIG--GALYSYWPIDYTKTIDKKGDW 127 (294)
T ss_dssp HHHHHHHTTCEEEE-E-ECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEE--ESTTSCSSCCTTSCCCHHHHH
T ss_pred HHHHHHHcCCeEEE-e-ecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeee--ccccCCCCCcCCCCCCHHHHH
Confidence 56667777776543 1 010 0111112222223455555555556677875432 122211 123445677
Q ss_pred HHHHHHHHHHHHHHHhCCceeeecce
Q psy196 165 LENANVLARYASICQASRIVPIVEPE 190 (364)
Q Consensus 165 ~~na~~LArYA~icQ~~GLVPIVEPE 190 (364)
...+..|.+-+.++++.|+.-.+||-
T Consensus 128 ~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 128 ERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 77788888888889999999999985
No 23
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=24.80 E-value=1.8e+02 Score=20.30 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=39.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhh
Q psy196 2 PTHFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEEN 55 (364)
Q Consensus 2 ~~~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeen 55 (364)
......++++..++|...=+.+=.+|.|.|-.+| +.+.|..+|...+++.
T Consensus 2 ~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 51 (85)
T 2ktg_A 2 SEQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEE----LGTVMRALGANPTKQK 51 (85)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHTCTTCCSEEEHHH----HHHHHHTTSSCCCHHH
T ss_pred chhhhhCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHhCCCCCHHH
Confidence 3445678999999999999999899999997766 5677888898766543
No 24
>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20
Probab=23.25 E-value=45 Score=25.90 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhCCcee
Q psy196 168 ANVLARYASICQASRIVP 185 (364)
Q Consensus 168 a~~LArYA~icQ~~GLVP 185 (364)
...-++|...|+++|+-|
T Consensus 20 ~~vY~~Y~~~C~~~~~~p 37 (76)
T 1dp7_P 20 STLYNHYLLHSQEQKLEP 37 (76)
T ss_dssp HHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhcCCcc
Confidence 567899999999999877
No 25
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=22.48 E-value=2.1e+02 Score=24.96 Aligned_cols=61 Identities=13% Similarity=-0.032 Sum_probs=40.4
Q ss_pred ChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHHHHhCCceeeecc
Q psy196 127 GLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASICQASRIVPIVEP 189 (364)
Q Consensus 127 GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEP 189 (364)
.++.+.+-+....++||..-..-.- ...+.+...++..-+..|.+-+.++++.|+.-.+||
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG--ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC--BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 4555655556667789754321111 122334566777778888888899999999999997
No 26
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=22.46 E-value=86 Score=29.74 Aligned_cols=56 Identities=18% Similarity=0.260 Sum_probs=43.2
Q ss_pred cchHHHHhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeee
Q psy196 92 TPFVELLRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCV 151 (364)
Q Consensus 92 ~~~~~~L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaV 151 (364)
++++++++++|+-+||=.|-|.....|.++ ..++-...-++.|.+-|..|=|+-..
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~----~~~~~~~~da~~~a~wGvdylK~D~~ 141 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPG----TTLDKVVQDAQTFAEWKVDMLKLDGC 141 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBC----BCGGGHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCc----hhHhHHHHHHHHHHHhCCceEeeccC
Confidence 478999999999999999998887666543 13555555678888999998887643
No 27
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=22.22 E-value=1.3e+02 Score=24.60 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHHhc--CCCCceEeecCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccc
Q psy196 7 YLSPELQAELKLIAETLV--EPGKGILAADESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTL 84 (364)
Q Consensus 7 ~~~~~~~~eL~~~A~~~~--a~gKGiLAaDES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl 84 (364)
-||+++.++|++.=..+= .++.|.|-.+| +...|+++|+..|++.-+.+ +.... .+ +|.|=|+|=+
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~E----l~~~lr~lG~~~t~~el~~~----~~~d~-~~---~g~i~f~eFl 69 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAK----VGDLLRCLGMNPTEAQVHQH----GGTKK-MG---EKAYKLEEIL 69 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGG----HHHHHHHTTCCCCHHHHHTT----TCCSS-TT---SCEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHH----HHHHHHHcCCCCCHHHHHHH----Hcccc-cC---CCcccHHHHH
Confidence 589999999988766553 37889997766 78899999999887654433 22211 11 4667676644
No 28
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=22.16 E-value=5e+02 Score=24.44 Aligned_cols=228 Identities=15% Similarity=0.122 Sum_probs=108.9
Q ss_pred HHhcC--CCCceEee-cCCCCchHHHhhhcCCCCChhhHHHhhhhhcccCCCCCCceEEeeeccccccccccCCcchHHH
Q psy196 21 ETLVE--PGKGILAA-DESVSTMGKRLADIGVENTEENRRLYRQLLFTTDHELGESISGVILFHDTLYEKADDGTPFVEL 97 (364)
Q Consensus 21 ~~~~a--~gKGiLAa-DES~gt~~Krl~~~Gventeenrr~yR~~l~tt~~~~~~~IsGvILfeETl~q~~~~G~~~~~~ 97 (364)
++|+. .||-++.+ |..-.-=|- -|+++-. ...+.+ + .+..+|++.--.+.+.. . .+
T Consensus 45 ~ri~~~~~G~~~iv~~DHG~~~gp~----~gl~~~~---~~i~~l---~-----~g~dav~~~~G~~~~~~-~-----~~ 103 (295)
T 3glc_A 45 SRIFNPKTGKTVMLAFDHGYFQGPT----TGLERID---INIAPL---F-----EHADVLMCTRGILRSVV-P-----PA 103 (295)
T ss_dssp HHHSCTTTSCEEEEECCTHHHHCSC----TTCTTHH---HHTGGG---G-----GGCSEEEECHHHHHHHS-C-----GG
T ss_pred HHhcCCCCCCEEEEecCCCcccCCC----CchhhhH---HHHHHh---h-----cCCCEEEECHhHHhhhc-c-----cc
Confidence 67885 47776666 975421010 1444322 222222 1 23667777655554321 1 11
Q ss_pred HhhCCCeeeEecCCCcccCCCCCCCCcCCChhhHHHHHHHhhhCCCccceeeeeeecCCCCccHHHHHHHHHHHHHHHHH
Q psy196 98 LRQRGIIPGIKVDKGVVPLAGTDGETTTQGLDDLAKRCDKYKTDGCHFAKWRCVLKIGDHTPSALAILENANVLARYASI 177 (364)
Q Consensus 98 L~~~GIvpGIKvDkGl~pl~g~~~e~~t~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~~~Ps~~aI~~na~~LArYA~i 177 (364)
.++---+|++-+.--.+..+.+..+. .+.+..++||..-..+ +.+++. .... .-..+++-...
T Consensus 104 ---~~~~lil~l~~~t~~~~~~~~~~l~~-------~ve~Av~~GAdaV~~~--i~~Gs~--~~~~---~l~~i~~v~~~ 166 (295)
T 3glc_A 104 ---TNRPVVLRASGANSILAELSNEAVAL-------SMDDAVRLNSCAVAAQ--VYIGSE--YEHQ---SIKNIIQLVDA 166 (295)
T ss_dssp ---GCCCEEEECEECCCTTSCTTCCEECS-------CHHHHHHTTCSEEEEE--ECTTST--THHH---HHHHHHHHHHH
T ss_pred ---CCccEEEEEcCCCcCCCCCccchhHH-------HHHHHHHCCCCEEEEE--EECCCC--cHHH---HHHHHHHHHHH
Confidence 13334567776543222222233222 2334457898876653 444432 2222 34456666788
Q ss_pred HHhCCceeeecceecCCCccchHHHHHHHHHHHHHHHHHhhcCceeeecccccCCccCCCCccCCCCChHHHHHHHHHHh
Q psy196 178 CQASRIVPIVEPEVLPDGAHDLARCQKVTEAVLASVVKALHDHNVYLEGILLKPNMVTPGASCSEKYAPSDIALATVTAL 257 (364)
Q Consensus 178 cQ~~GLVPIVEPEVl~dg~h~i~~~~~vte~vL~~v~~~L~~~~V~LegtlLKpnmV~pG~~~~~~~~~~evA~~Tv~~l 257 (364)
|.+.|+.=|+|+ ..|.|-......+ ....+.-.+.|.+ ++|.+. + + .+.++|.+.
T Consensus 167 a~~~GlpvIie~---~~G~~~~~d~e~i-----~~aariA~elGAD----~VKt~~-t-~------e~~~~vv~~----- 221 (295)
T 3glc_A 167 GMKVGMPTMAVT---GVGKDMVRDQRYF-----SLATRIAAEMGAQ----IIKTYY-V-E------KGFERIVAG----- 221 (295)
T ss_dssp HHTTTCCEEEEE---CC----CCSHHHH-----HHHHHHHHHTTCS----EEEEEC-C-T------TTHHHHHHT-----
T ss_pred HHHcCCEEEEEC---CCCCccCCCHHHH-----HHHHHHHHHhCCC----EEEeCC-C-H------HHHHHHHHh-----
Confidence 999998778876 3454421111111 1011111233443 355552 2 2 123444322
Q ss_pred hccCCCCCceEEEcCCCCC--HHHHHHHH-HHhhcccCCCCCeeEEeehhhhhHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy196 258 QRTLPVAVPGVVFLSGGQT--EEEASVHL-NAINQTQALTPWALSFSYGRALQASVLRAWGGRPGNVLAGQNELLARAR 333 (364)
Q Consensus 258 ~rtvP~aVpgVvFLSGGqs--~eeAt~~L-naiN~~~~~~PW~lsFSfgRALq~s~L~~W~G~~~nv~~aQ~~~~~ra~ 333 (364)
. .+| | ..|||-+ ++++-+++ .+|.. + .-..++||++-++ +|..++-++|..--.
T Consensus 222 ---~--~vP-V-v~~GG~~~~~~~~l~~v~~ai~a--G----A~Gv~vGRnI~q~---------~dp~~~~~al~~ivh 278 (295)
T 3glc_A 222 ---C--PVP-I-VIAGGKKLPEREALEMCWQAIDQ--G----ASGVDMGRNIFQS---------DHPVAMMKAVQAVVH 278 (295)
T ss_dssp ---C--SSC-E-EEECCSCCCHHHHHHHHHHHHHT--T----CSEEEESHHHHTS---------SSHHHHHHHHHHHHH
T ss_pred ---C--CCc-E-EEEECCCCCHHHHHHHHHHHHHh--C----CeEEEeHHHHhcC---------cCHHHHHHHHHHHHh
Confidence 2 245 3 4688864 56666666 34432 2 3378899998764 466666666554433
No 29
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=22.04 E-value=43 Score=29.97 Aligned_cols=29 Identities=31% Similarity=0.612 Sum_probs=23.0
Q ss_pred EEcCCCCCHHHHHHHHHHhhcccCCCCCeeEEeeh
Q psy196 269 VFLSGGQTEEEASVHLNAINQTQALTPWALSFSYG 303 (364)
Q Consensus 269 vFLSGGqs~eeAt~~LnaiN~~~~~~PW~lsFSfg 303 (364)
+||+||.+.|...+-+... .||++-.|=|
T Consensus 154 ~~LAGGL~peNV~~ai~~~------~p~gVDvsSG 182 (205)
T 1nsj_A 154 LVLSGGLNPENVRSAIDVV------RPFAVDVSSG 182 (205)
T ss_dssp EEEESSCCTTTHHHHHHHH------CCSEEEESGG
T ss_pred EEEECCCCHHHHHHHHHhc------CCCEEEECCc
Confidence 7999999998876666644 4899988855
No 30
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=21.14 E-value=2.3e+02 Score=24.34 Aligned_cols=61 Identities=18% Similarity=0.142 Sum_probs=41.3
Q ss_pred CChhhHHHHHHHhhhCCCccceeeeeeecCC----CCccHHHHHHHHHHHHHHHHHHHhCCceeeecce
Q psy196 126 QGLDDLAKRCDKYKTDGCHFAKWRCVLKIGD----HTPSALAILENANVLARYASICQASRIVPIVEPE 190 (364)
Q Consensus 126 ~GLD~L~~R~~~y~~~GarFaKWRaVi~i~~----~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPE 190 (364)
..++.+..-+....++||..-. +..+. ..+...++...+..|.+-+.++++.|+.-.+||.
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~----~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLV----LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEE----EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHHHHhCCCEEE----EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 3456666666666788975422 22221 1244567777788888888999999999999983
No 31
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=20.37 E-value=1e+02 Score=23.98 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=39.7
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhhH
Q psy196 4 HFNYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEENR 56 (364)
Q Consensus 4 ~~~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeenr 56 (364)
..+.+++++..+|...=+.+=.++.|.|-.+| +.+.|..+|...+++.-
T Consensus 6 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~~ 54 (153)
T 2ovk_B 6 RRVKLSQRQMQELKEAFTMIDQDRDGFIGMED----LKDMFSSLGRVPPDDEL 54 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCSTTTCCCHHH----HHHHTTTTTSCCCHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCCCeECHHH----HHHHHHHhCCCCCHHHH
Confidence 35678999999999999999899999997766 67888889988776543
No 32
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=20.02 E-value=1.2e+02 Score=23.37 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCceEeecCCCCchHHHhhhcCCCCChhh
Q psy196 6 NYLSPELQAELKLIAETLVEPGKGILAADESVSTMGKRLADIGVENTEEN 55 (364)
Q Consensus 6 ~~~~~~~~~eL~~~A~~~~a~gKGiLAaDES~gt~~Krl~~~Gventeen 55 (364)
+.+|+++.++|...=+.+=.++.|.|-.+| +.+.|..+|...+++.
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 47 (151)
T 1w7j_B 2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQ----CGDVMRALGQNPTNAE 47 (151)
T ss_dssp ---------CHHHHHHHHCCSSSSEEESTT----HHHHHHHTTCCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCCCHHH
Confidence 457888888999999999999999998877 7888899998877543
Done!