BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1960
(428 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 291 bits (744), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 205/349 (58%), Gaps = 44/349 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + E +P V+G +E T +QYQ
Sbjct: 31 KVANEPILAFSQGSPERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQYQLS------- 83
Query: 90 QPMPHNHKKKIAKFYYA-TPVLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A+D + L P + L ++L
Sbjct: 84 ---PFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 140
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + G+QP + T Y
Sbjct: 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVY--- 197
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 198 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 249
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FP
Sbjct: 250 REAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFP 309
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
RL GECGGKNFHF+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+
Sbjct: 310 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPK 358
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 149 LKYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
L+ AAGN+YINDKSTGSVVGQQPFGG R S
Sbjct: 497 LRNAAGNFYINDKSTGSVVGQQPFGGARAS 526
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 290 bits (742), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 206/348 (59%), Gaps = 44/348 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + +E +P V+G +E T VQYQ VS
Sbjct: 34 KVANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQ--VS----- 86
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 87 ---PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR 143
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + GQQP + T Y
Sbjct: 144 AEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVY--- 200
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 201 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 252
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVPTF LW QV +N++ + FP
Sbjct: 253 REAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFP 312
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
RL GECGGKNFHF+H SA+VESVV+GT+RSAFEY GQKCSACSR+YVP
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVP 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 100 IAKFYYATPVLKSALDIVSSLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYIN 159
++ + Y K L +V S Y GL D+ L+ AAGN+YIN
Sbjct: 456 LSVYVYPDDKYKETLQLVDSTTSY-----GLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 160 DKSTGSVVGQQPFGGGRMS 178
DKSTGS+VGQQPFGG R S
Sbjct: 511 DKSTGSIVGQQPFGGARAS 529
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/348 (46%), Positives = 206/348 (59%), Gaps = 44/348 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + +E +P V+G +E T VQYQ VS
Sbjct: 34 KVANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQ--VS----- 86
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 87 ---PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR 143
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + GQQP + T Y
Sbjct: 144 AEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVY--- 200
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 201 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 252
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVPTF LW QV +N++ + FP
Sbjct: 253 REAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFP 312
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
RL GECGGKNFHF+H SA+VESVV+GT+RSAFEY GQKCSAC+R+YVP
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVP 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 100 IAKFYYATPVLKSALDIVSSLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYIN 159
++ + Y K L +V S Y GL D+ L+ AAGN+YIN
Sbjct: 456 LSVYVYPDDKYKETLQLVDSTTSY-----GLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 160 DKSTGSVVGQQPFGGGRMS 178
DKSTGS+VGQQPFGG R S
Sbjct: 511 DKSTGSIVGQQPFGGARAS 529
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/348 (46%), Positives = 205/348 (58%), Gaps = 44/348 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + +E +P V+G +E T VQYQ VS
Sbjct: 34 KVANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQ--VS----- 86
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 87 ---PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRR 143
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + GQQP + T Y
Sbjct: 144 AEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVY--- 200
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 201 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 252
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVPTF LW QV +N++ + FP
Sbjct: 253 REAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFP 312
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
RL GECGGKNFHF+H SA+VESVV+GT+RSAFEY GQKCSAC R+YVP
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVP 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 100 IAKFYYATPVLKSALDIVSSLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYIN 159
++ + Y K L +V S Y GL D+ L+ AAGN+YIN
Sbjct: 456 LSVYVYPDDKYKETLQLVDSTTSY-----GLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 160 DKSTGSVVGQQPFGGGRMS 178
DKSTGS+VGQQPFGG R S
Sbjct: 511 DKSTGSIVGQQPFGGARAS 529
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 204 VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 262
++P+NF AI + P +G++V+ KP++ A++ +++I EAG PPGVVNF+P
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHA 322
G G + P + INFTGS+ +++ G+ F R E GGKN +
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDE 299
Query: 323 SANVESVVNGTIRSAFEYCGQKCSACSRM 351
+A+ + G + SA+ + GQKCSA SR+
Sbjct: 300 TADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 137 LHDDLYFRCLDDLKYA-----AGNYYINDKSTGSVVGQQPFGGGRMS 178
L +Y R + L++A GN Y N K TG++VG QPFGG ++S
Sbjct: 445 LTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A ++P+NF AI +A + G+ V++KPS + + + ++ EAG+P GV N
Sbjct: 668 GVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFN 727
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
F P G V GD + P ++ I FTGS+ T R+ + K N ++I E GGKN
Sbjct: 728 FTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNA 787
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ V + SAF + GQKCSACSR+ V
Sbjct: 788 IIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIV 823
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 150 KYAAGNYYINDKSTGSVVGQQPFGGGRMSAL 180
++ GN YIN +TG++V +QPFGG RMS +
Sbjct: 957 EFRVGNLYINRNNTGALVERQPFGGARMSGV 987
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 204 VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 262
++P+NF AI + P +G++V+ KP++ A++ +++I EAG PPGVVNF+P
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHA 322
G G + P + INFTGS+ +++ G+ F R E GGK+ +
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDE 299
Query: 323 SANVESVVNGTIRSAFEYCGQKCSACSRM 351
+A+ + G + SA+ + GQKCSA SR+
Sbjct: 300 TADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 137 LHDDLYFRCLDDLKYA-----AGNYYINDKSTGSVVGQQPFGGGRMS 178
L +Y R + L++A GN Y N K TG++VG QPFGG ++S
Sbjct: 445 LTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 204 VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 262
++P+NF AI + P +G++V+ KP++ A++ +++I EAG PPGVVNF+P
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHA 322
G G + P + INFTGS+ +++ G+ F R E GGK+ +
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDE 299
Query: 323 SANVESVVNGTIRSAFEYCGQKCSACSRM 351
+A+ + G + SA+ + GQK SA SR+
Sbjct: 300 TADFDLAAEGVVVSAYGFQGQKXSAASRL 328
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 137 LHDDLYFRCLDDLKYA-----AGNYYINDKSTGSVVGQQPFGGGRMS 178
L +Y R + L++A GN Y N K TG++VG QPFGG ++S
Sbjct: 445 LTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 199 GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF AI P + G++V+ KP+ A + +++ E+G+P GVVN
Sbjct: 174 GVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVN 233
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
FVP G GD + P + I FTGS R++ + K + ++I E GGK+
Sbjct: 234 FVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDT 293
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ ++E SAF + GQKCSA SR V E
Sbjct: 294 VVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHE 331
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 150 KYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
++ GN Y N TG++VG PFGG +MS
Sbjct: 463 EFHVGNLYFNRNCTGAIVGYHPFGGFKMS 491
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 199 GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G +SP+NF AI A P + G++V+ KP+ T + +++ +AG+P GV+N
Sbjct: 174 GVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVIN 233
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+VP G GD + P + I FTGS RL+ + + R+I E GGK+
Sbjct: 234 YVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDT 293
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A+++ + SAF + GQKCSA SR +
Sbjct: 294 VVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVI 329
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 150 KYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
++ GN Y N TG++VG PFGG +MS
Sbjct: 463 EFHVGNLYFNRNCTGAIVGYHPFGGFKMS 491
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N+ L PAL+ G +++ KPS+ A LS +I+ EA +P GV N
Sbjct: 163 GVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFN 222
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
+ DG G ++A P L I+FTGS + GK+I N R+ E GGK
Sbjct: 223 LINGDGANVGSYLSAHPDLEMISFTGST--------RAGKDISKNASNTLKRVCLELGGK 274
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ I A A+++++ G +R F GQ C+A +RM V +
Sbjct: 275 GANIIFADADIDALQRG-VRHCFYNSGQSCNAPTRMLVEQ 313
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N+ + + PAL G S++ KPS+ L+ ++++M E G P G +N
Sbjct: 172 GVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
+ G GD ++ + ++FTG + T GK+I N N + E GGK
Sbjct: 232 LILGAGSEVGDVMSGHKEVDLVSFTGGIET--------GKHIMKNAANNVTNIALELGGK 283
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
N + I A+ E V+ + + + GQ CSA SR+ V
Sbjct: 284 NPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILV 321
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A PAL G +++ KP+ S + ++ I AGVP GV N
Sbjct: 147 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G+ +T++P + ++FTGS +L Q K+I ++ E GG
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK------KVSLELGGNAP 260
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A+++ V G + S F GQ C +R+YV +
Sbjct: 261 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQD 298
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A PAL G +++ KP+ S + ++ I AGVP GV N
Sbjct: 147 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G+ +T++P + ++FTGS +L Q K+I ++ E GG
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK------KVSLELGGNAP 260
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A+++ V G + S F GQ C +R+YV +
Sbjct: 261 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQD 298
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ +V+ +KP +S + + EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD I + INFTGS +G+ I ++ E GGK+
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGST--------GIGERIGKMAGMRPIMLELGGKDS 256
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++E I AF Y GQ+C+A R+ V E
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 193 RGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGV 251
RG G+ FVA +SP+NF T ALM G+SV+ KP++ ++ EAG+
Sbjct: 648 RGRGV--FVA-ISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGI 704
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN---VYKNFP-- 306
P + V DG + G +TA P +AG+ FTGS +V ++IN K+ P
Sbjct: 705 PKSALYLVTGDGRI-GAALTAHPDIAGVVFTGST--------EVARSINRALAAKDGPIV 755
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
LI E GG N A+A E V + + SAF GQ+CSA ++V E
Sbjct: 756 PLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQE 804
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 120 LCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
L E+ GL + DD +D ++ GN Y+N G+VVG QPFGG +S
Sbjct: 906 LRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV--GNIYVNRNMIGAVVGVQPFGGNGLS 962
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++V+ KP++ LS + ++ EAG PPGVVN
Sbjct: 159 GVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVN 218
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+P GP G I + + I FTGS + G++ N R+ E GGK+
Sbjct: 219 ILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRS-----NLKRVTLELGGKSP 273
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ I A A+++ V + F GQ C+A SR++V E
Sbjct: 274 NIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 311
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ +V+ +KP +S + + EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD I + INF+GS +G+ I ++ E GGK+
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFSGST--------GIGERIGKMAGMRPIMLELGGKDS 256
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++E I AF Y GQ+C+A R+ V E
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+N I PAL G++V+ KP++ L+ + ++ EAG PPGVVN
Sbjct: 161 GVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVN 220
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN---VYKNFPRLIGECGG 314
VP GP G I++ + + FTGS +VGK I N R+ E G
Sbjct: 221 IVPGYGPTAGAAISSHMDVDKVAFTGST--------EVGKMIQEAAAKSNLKRVTLELGA 272
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
KN + A A+++S V + F GQ C A S+++V E
Sbjct: 273 KNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEE 313
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N + PAL G++V+ KP++ + + + +I+ EA +PPGV N
Sbjct: 164 GPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFN 223
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V G G + A P + + TG T GK + N + RL E GGK
Sbjct: 224 LVQGFGEEAGAALVAHPLVPLLTLTGETET--------GKIVMRNAADHLKRLSPELGGK 275
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ + A A++E ++ + F + G++C+A SR+ V E
Sbjct: 276 SPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEE 315
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++V+ KP++ L+ + ++ EAG PPGVVN
Sbjct: 161 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 220
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
VP GP G I++ + + FTGS + GK+ N R+ E GGK+
Sbjct: 221 IVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKS-----NLKRVSLELGGKSP 275
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A A++++ V + F + GQ C A SR++V E
Sbjct: 276 CIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 313
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ +V+ +KP +S + + EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD I + INFTGS +G+ I ++ GGK+
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGST--------GIGERIGKMAGMRPIMLALGGKDS 256
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++E I AF Y GQ+C+A R+ V E
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ +V+ +KP +S + + EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD I + INFTGS +G+ I ++ E GGK+
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGST--------GIGERIGKMAGMRPIMLELGGKDS 256
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++E I AF Y GQ+ +A R+ V E
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVME 294
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ G++V++KP+ LS + + + +AG P G++
Sbjct: 154 GVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQ 213
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G V GD + P + I FTG T R+ + K P ++ E GGK+
Sbjct: 214 VVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA-------KMIPVVL-ELGGKDP 265
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A+++ + + AF Y GQ+C+A R++V +
Sbjct: 266 AIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQD 303
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 170 QPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228
+ G + + +T +E S++ R G V +SP+N+ + PAL G + +
Sbjct: 123 EALDGKQKAPVTLPMERFKSHVLRQPL--GVVGLISPWNYPLLMATWKIAPALAAGCTAV 180
Query: 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTF 288
KPS+ A ++ ++ E G+PPGV+N + GP G + + P + I FTGS T
Sbjct: 181 LKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATG 240
Query: 289 NRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSAC 348
+++ + + + E GGK+ + +++ VV TI F GQ CSA
Sbjct: 241 SKVMASAAQLVK------PVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSAT 294
Query: 349 SRMYVPE 355
SR+ V E
Sbjct: 295 SRLLVHE 301
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G ++P+NF +L A GS V+ KPS+ + + +I + GVP GV N
Sbjct: 141 GVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFN 200
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V DG G+ ++ P + +FTGS PT +++ + K+F ++ E GGK+
Sbjct: 201 LVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA------KDFKKVSLELGGKSP 254
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
+ + +++ T GQ C+A +R+ VP
Sbjct: 255 YIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ + GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLQLGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ CSA SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQE 312
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 159 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 218
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+P GP G I + + + FTGS + + + GK+ N R+ E GGK+
Sbjct: 219 VIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKS-----NLKRVTLEIGGKSP 273
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ I + A+++ V + F GQ C A SR +V E
Sbjct: 274 NIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 311
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA P+NF N PAL+ G+ V++KPS+ K I+AG+P GV+N
Sbjct: 141 GVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLN 200
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + A L G+ FTGS T N L Q G L E GG N
Sbjct: 201 LVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI-----LALEXGGNNP 254
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++++ V I+SAF GQ+C+ R+ VP+
Sbjct: 255 LVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQ 292
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 256
G ++++SPFNF + PA+ +G+SV+ KP TA+ I K AG+P GV+
Sbjct: 145 GVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVL 204
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGECGG 314
N + D GD + +P I+FTGS VG++I + F R+ E GG
Sbjct: 205 NVMLTDVKEIGDGMLTNPIPRLISFTGSTA--------VGRHIGEIAGRAFKRMALELGG 256
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
N + + A+V+ V+ I F + GQ C +R+ V
Sbjct: 257 NNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIV 295
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ C A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ C A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 154 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 213
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 214 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 265
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ C A SR +V E
Sbjct: 266 KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 306
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ C A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 220 PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278
PAL+ G+++++KPS+ L I +I+IEAG+P G+ N + D G + P +A
Sbjct: 173 PALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAK 231
Query: 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAF 338
++ TGSVPT ++ ++ + E GGK+ + A++ES V G + F
Sbjct: 232 VSLTGSVPTGRKVAAAAAGHLK------HVTMELGGKSPMIVFDDADIESAVGGAMLGNF 285
Query: 339 EYCGQKCSACSRMYV 353
GQ CS +R++V
Sbjct: 286 YSSGQVCSNGTRVFV 300
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA----GVPP 253
G V A++PFNF PA+ G+ ++ PS A L + KI+ A VP
Sbjct: 132 GIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPL 191
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG 313
GV N + G V GD I + + I+FTGS +VG+ I F ++ E G
Sbjct: 192 GVYNLLTGAGEVVGDEIVVNEKVNMISFTGSS--------KVGELITKKAGFKKIALELG 243
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
G N + + A++ VN I+ +F Y GQ C + + V E
Sbjct: 244 GVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDE 285
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A PAL G ++ KP+++ S + + AGVP GV++
Sbjct: 150 GVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLS 209
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V D G IT++P + ++FTGS L Q + +L E GG
Sbjct: 210 VVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVK------KLTLELGGNAP 263
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++++ V G I S + GQ C +R +V E
Sbjct: 264 FIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHE 301
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMG-SSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V +++P+N+ PA+ G ++V++KPS+ L+ + +++ + +P GVVN
Sbjct: 163 GIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVN 221
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G+ + P + ++ TG + T ++ K + R E GGK
Sbjct: 222 VITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVK------RTHLELGGKAP 275
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMY 352
++ A++E+VVNG + GQ C+A R+Y
Sbjct: 276 VIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIY 310
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++ +NF PAL+ G++++ KP+ L+ + +I EAG+P GV+N
Sbjct: 150 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 209
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G V G T+ SP I TGS +++ + + P ++ E GGK
Sbjct: 210 VINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMT-----PVML-ELGGKAP 263
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A+++ + F CGQ C+ R+YV
Sbjct: 264 MVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYV 299
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + F GS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFAGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ C A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA+++P+N+ + PAL G+ V+ KPS+ L+ + ++ + P GVVN
Sbjct: 161 GVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD +T P + ++ TGS+ T + +I R E GGK
Sbjct: 220 ILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIK------RTHMELGGKAP 273
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMY 352
+ A++E+VV G + GQ C+A R+Y
Sbjct: 274 VIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIY 308
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N+ + PAL G + + KPS+ A ++ + I E G+P GV+N
Sbjct: 170 GVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLN 229
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V GP G ++A P + + FTGS T ++ + + E GGK+
Sbjct: 230 IVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVK------PVTLELGGKSP 283
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ +++ V T+ F GQ CSA SR+ +
Sbjct: 284 IVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLI 319
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF PAL+ G++++ KPS+ + KI+ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + +P +A ++ TGSV ++ KNI ++ E GGK
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT------KVXLELGGKAP 257
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A++E V + S GQ C+ R+YV
Sbjct: 258 AIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYV 293
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF PAL+ G++++ KPS+ + KI+ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + +P +A ++ TGSV ++ KNI ++ E GGK
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT------KVCLELGGKAP 257
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A++E V + S GQ C+ R+YV
Sbjct: 258 AIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYV 293
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF PAL+ G++++ KPS+ + KI+ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + +P +A ++ TGSV ++ KNI ++ E GGK
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT------KVCLELGGKAP 257
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A++E V + S GQ C+ R+YV
Sbjct: 258 AIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYV 293
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ E GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ C A R++V E
Sbjct: 318 KGENCIAAGRLFVEE 332
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A + +N+ + PAL G++V++KPS ++ + +I EAGVP G+VN
Sbjct: 157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVN 216
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + P +A ++FTGSVPT ++ K + + E GGK+
Sbjct: 217 VVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK------HVTLELGGKSP 269
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I +E+ V G + + F GQ C+ +R++V
Sbjct: 270 LLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFV 305
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP GP G I + + + FTGS ++G+ I V N R+ E GG
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRVTLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + I + A+++ V + F GQ A SR +V E
Sbjct: 272 KSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQE 312
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ + GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ C A R++V E
Sbjct: 318 KGENCIAAGRLFVEE 332
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G A ++P+NF + +G LA G +V+ KP++ S + ++ +AG+P
Sbjct: 148 GVAAVITPWNFPSAMITRKVGAALA-----AGCTVVVKPAEDTPFSALALAELASQAGIP 202
Query: 253 PGVVNFVPA---DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309
GV N +P + G+ I P ++ I+FTGS T L ++ R+
Sbjct: 203 SGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK------RVS 256
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
E GG + SANV+ V G + S F GQ C CS ++
Sbjct: 257 MELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC-VCSNQFL 299
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 192 GRGEGLD--------GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242
G G G+D G A ++PFNF + PA+ G++ + KPS+ +
Sbjct: 149 GAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRL 208
Query: 243 YKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINV 301
++ IEAG+P G++N V D G V D I P +A ++F GS P ++ N
Sbjct: 209 AELXIEAGLPAGILNVVNGDKGAV--DAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKR 266
Query: 302 YKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ F G KN I A+++ N I + + G++C A S
Sbjct: 267 AQCF------GGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAIS 308
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA + +N+ PAL G+++++KPS+ L+ + +I EAGVP GV N
Sbjct: 143 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 202
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G +T P + I+FTG T ++ + + + E GGK+
Sbjct: 203 VLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-----SLKEVTMELGGKSP 257
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ + + + F GQ C+ +R+++
Sbjct: 258 LIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFI 293
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA + +N+ PAL G+++++KPS+ L+ + +I EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G +T P + I+FTG T ++ + + + E GGK+
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-----SLKEVTMELGGKSP 258
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ + + + F GQ C+ +R+++
Sbjct: 259 LIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFI 294
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ C A R++V E
Sbjct: 318 KGENCIAAGRLFVEE 332
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++PFNF + + A+ +G++ + KPS+ L + ++ +AG+P GV N
Sbjct: 143 GVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFN 202
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V V + I P + I+F GS P ++ + +N+ R+ G KN
Sbjct: 203 VVYGAHDVV-NGILEHPEIKAISFVGSKPVGEYVYKKGSENLK------RVQSLTGAKNH 255
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ AN+E V + +AF G++C AC+ + V E
Sbjct: 256 TIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEE 293
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ E GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ A R++V E
Sbjct: 318 KGENAIAAGRLFVEE 332
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ E GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ A R++V E
Sbjct: 318 KGENSIAAGRLFVEE 332
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA + +N+ PAL G+++++KPS+ L+ + +I EAGVP GV N
Sbjct: 143 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 202
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G +T P + I+FTG T ++ + + + GGK+
Sbjct: 203 VLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-----SLKEVTMALGGKSP 257
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ + + + F GQ C+ +R+++
Sbjct: 258 LIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFI 293
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G A ++P+NF + +G LA G +V+ KP++ S + ++ +AG+P
Sbjct: 148 GVAAVITPWNFPSAMITRKVGAALA-----AGCTVVVKPAEDTPFSALALAELASQAGIP 202
Query: 253 PGVVNFVPA---DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309
GV N +P + G+ I P ++ I+FTGS T L ++ R+
Sbjct: 203 SGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK------RVS 256
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
E GG + SANV+ V G + S F GQ + CS ++
Sbjct: 257 MELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQ-TAVCSNQFL 299
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA + +N+ PAL G+++++KPS+ L+ + +I EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G +T P + I+FTG T ++ + + + E GGK+
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-----SLKEVTMELGGKSP 258
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ + + + F GQ + +R+++
Sbjct: 259 LIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFI 294
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G++V+ KP+ L+ ++ ++AG+P GVVN +P G + G ++ P + I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 284 SVPTFNRLWLQVGKNIN---VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
S +VGK+I N ++ GGK+ I A ++ V + S F
Sbjct: 266 ST--------EVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFN 317
Query: 341 CGQKCSACSRMYVPE 355
G+ A R++V E
Sbjct: 318 KGENAIAAGRLFVEE 332
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA + +N+ PAL G+++++KPS+ L+ + +I EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G G +T P + I+FTG T ++ + + + E GGK+
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-----SLKEVTMELGGKSP 258
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
I A+++ + + + F GQ + +R+++
Sbjct: 259 LIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFI 294
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 199 GFVAAVSPFN---FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G VAA++PFN F A+ + Y+ + G++V+ KPS + L K +++AG PP
Sbjct: 159 GVVAAITPFNYPLFDAVN-KITYS-FIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDA 216
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ + G + I A +A ++FTGS +VG+ + + + E GG
Sbjct: 217 IALLNLPGK-EAEKIVADDRVAAVSFTGST--------EVGERVVKVGGVKQYVMELGGG 267
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ + A+++ + R + Y GQ+C A
Sbjct: 268 DPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 199 GFVAAVSPFN---FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G VAA++PFN F A+ + Y+ + G++V+ KPS + L K +++AG PP
Sbjct: 159 GVVAAITPFNYPLFDAVN-KITYS-FIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDA 216
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ + G + I A +A ++FTGS +VG+ + + + E GG
Sbjct: 217 IALLNLPGK-EAEKIVADDRVAAVSFTGST--------EVGERVVKVGGVKQYVMELGGG 267
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ + A+++ + R + Y GQ+C A
Sbjct: 268 DPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 199 GFVAAVSPFN---FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G VAA++PFN F A+ + Y+ + G++V+ KPS + L K +++AG PP
Sbjct: 159 GVVAAITPFNYPLFDAVN-KITYS-FIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDA 216
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ + G + I A +A ++FTGS +VG+ + + + E GG
Sbjct: 217 IALLNLPGK-EAEKIVADDRVAAVSFTGST--------EVGERVVKVGGVKQYVMELGGG 267
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ + A+++ + R + Y GQ+C A
Sbjct: 268 DPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 199 GFVAAVSPFN--FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
G VA ++P+N F +A A +++L KPS+ A ++ + +I E G+P GV+
Sbjct: 153 GVVALITPWNYPFLMATWKIAPALAAGCAAIL-KPSELASVTCLELGEICKEVGLPRGVL 211
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWL---QVGKNINVYKNFPRLIGECG 313
N V G G ++ + P + I+FTGS T +++ Q+ K +++ E G
Sbjct: 212 NIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSL---------ELG 262
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
GK+ + +++ V T+ F GQ CSA SR+ V E
Sbjct: 263 GKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHE 304
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 199 GFVAAVSPFNFTAIGGNL-AYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N+ + G + + KPS+ A L+ + +I E G+PPGV+N
Sbjct: 153 GVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLN 212
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWL---QVGKNINVYKNFPRLIGECGG 314
+ GP G + P + + FTGS T +++ Q+ K +++ E GG
Sbjct: 213 ILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSL---------ELGG 263
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + +++ I F GQ CSA SR+ + E
Sbjct: 264 KSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHE 304
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A PAL G +++ +P+D L+ + + +AG+P GV+
Sbjct: 170 GVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQ 229
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G +T++ + ++FTGS L Q I R+ E GG
Sbjct: 230 IVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIK------RISLELGGNAP 283
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
+ A++++ V+G + S + GQ C +R+YV
Sbjct: 284 FIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYV 319
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM---IEAGVPPG 254
G V ++ FNF A+ G + G+ LWK + T L + + KI+ +E PG
Sbjct: 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPG 218
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGEC 312
+ + G G + + ++FTGS QVGK + V + F R + E
Sbjct: 219 AICSLTCGGADIGTAMAKDERVNLLSFTGST--------QVGKQVGLMVQERFGRSLLEL 270
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
GG N A++ VV + +A GQ+C+ R+++ E
Sbjct: 271 GGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHE 313
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 230 KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFN 289
KPS+ A ++ + +I E G+P G +N + GP G + + P++ I+FTGS PT +
Sbjct: 198 KPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGS 257
Query: 290 RLWL---QVGKNINVYKNFPRLIGECGGKNFHFIHAS-ANVESVVNGTIRSAFEYCGQKC 345
++ Q+ K +++ E GGK+ + N++ T+ F GQ C
Sbjct: 258 KIMTAAAQLVKPVSL---------ELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVC 308
Query: 346 SACSRMYVPE 355
SA SR+ V E
Sbjct: 309 SATSRLIVQE 318
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGS--SVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
G V ++P+NF I + P +GS +V+ KPS+ ++ + ++ EAG+P GV
Sbjct: 163 GVVGIITPWNFPFIIAS-ERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVF 221
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKN 316
N V G G + P + + FTGSV +L + + R+ E GGK
Sbjct: 222 NVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVK------RVGLELGGKG 275
Query: 317 FHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A A++++ +G + GQ C + SR+ V E
Sbjct: 276 PQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQE 314
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 230 KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFN 289
KPS+ A ++ + +I E G+P G +N + GP G + + P++ I+FTGS PT +
Sbjct: 198 KPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGS 257
Query: 290 RLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
++ + + P + G N++ T+ F GQ CSA S
Sbjct: 258 KIMTAAAQLVK-----PVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATS 312
Query: 350 RMYVPE 355
R+ V E
Sbjct: 313 RLIVQE 318
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKP-SDTALLSNYTIYKIMIEAGVPPGVV 256
G V +SP+NF + PAL +G++V+ KP SDT + +I EAGVP GV+
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRL 291
+ V G GD I+FTGS P R+
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM---IEAGVPPG 254
G V ++ FNF A+ G G+ LWK + T L++ + KI+ +E PG
Sbjct: 157 GLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPG 216
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGEC 312
+ + G G + + ++FTGS VGK + V + F R + E
Sbjct: 217 AICSMTCGGADIGTAMAKDERVDLLSFTGST--------HVGKMVAMMVQERFGRKLLEL 268
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
GG N + A++ VV + ++ GQ+C+ R+ + E
Sbjct: 269 GGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHE 311
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 8/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + A+ P+NF P L+ G+S L K + I +I+ EAG P GV
Sbjct: 128 GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYG 187
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+V A+ I P +A + TGSV + + E GG +
Sbjct: 188 WVNANNEGVSQXIN-DPRIAAVTVTGSVRAGAA------IGAQAGAALKKCVLELGGSDP 240
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ A++E V + ++ GQ C+A R V E
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEE 278
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPP--GVV 256
V +SP+NF + PAL+ G +V+ KPS+ A + + VP V+
Sbjct: 129 LVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIA--PRFVAPLLXALNTVPELRDVL 186
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGG 314
FV G + I Y+ + FTGSV T G+ + + F E GG
Sbjct: 187 IFVEGGGETGANLIN---YVDFVCFTGSVAT--------GREVAETAARRFIPAYLELGG 235
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
K+ + SAN+E + + A GQ C + R+YV E
Sbjct: 236 KDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAE 276
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+ +N PAL+ G +++ KP+ L+ + ++ E G+P GV++
Sbjct: 148 GVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLS 207
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
VP G G +T++P + FTGS + + +VG+ L E GGK+
Sbjct: 208 VVPG-GIETGQALTSNPDIDMFTFTGS----SAVGREVGRRAAEMLKPCTL--ELGGKSA 260
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
I ++ + + + S GQ C +R+ P
Sbjct: 261 AIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPR 298
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGV-PPGVVNFVP 260
++ FNF + G PAL+ G V+ KP+ TA L+ + + ++AG+ PPG ++ +
Sbjct: 158 INAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADV-VDAGILPPGALSIIC 216
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRL-----WLQVGKNINVYKNFPRLIGECGGK 315
D I + ++FTGS T L ++Q G +NV E
Sbjct: 217 GSSAGLLDQIRSFDV---VSFTGSADTAATLRAHPAFVQRGARLNV---------EADSL 264
Query: 316 NFHFIHASANVES-----VVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + A A ++ + +R GQKC+A R +VPE
Sbjct: 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPE 309
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGV-PPGVVNFVP 260
++ FNF + G PAL+ G V+ KP+ TA L+ + + ++AG+ PPG ++ +
Sbjct: 156 INAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV-VDAGILPPGALSIIC 214
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRL-----WLQVGKNINVYKNFPRLIGECGGK 315
D I + ++FTGS T L ++Q G +NV E
Sbjct: 215 GSSAGLLDQIRSFDV---VSFTGSADTAATLRAHPAFVQRGARLNV---------EADSL 262
Query: 316 NFHFIHASANVES-----VVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + A A ++ + +R GQKC+A R +VPE
Sbjct: 263 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPE 307
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGV-PPGVVNFVP 260
++ FNF + G PAL+ G V+ KP+ TA L+ + + ++AG+ PPG ++ +
Sbjct: 158 INAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV-VDAGILPPGALSIIC 216
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRL-----WLQVGKNINVYKNFPRLIGECGGK 315
D I + ++FTGS T L ++Q G +NV E
Sbjct: 217 GSSAGLLDQIRSFDV---VSFTGSADTAATLRAHPAFVQRGARLNV---------EADSL 264
Query: 316 NFHFIHASANVES-----VVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + A A ++ + +R GQKC+A R +VPE
Sbjct: 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPE 309
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTP----ALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G + PFN+ NL TP + G++ + KPS+T ++ I KI+ EA P
Sbjct: 132 GVTYIIGPFNYPV---NLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEY 188
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
V V G + + P+ I FTGS P ++ +Q K+ ++ E GG
Sbjct: 189 VA--VIQGGRDENSHLLSLPF-DFIFFTGS-PNVGKVVMQAAA-----KHLTPVVLELGG 239
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
K + A+++ VN + F GQ C A +YV
Sbjct: 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYV 278
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGV-PPGVVNFVP 260
++ FNF + G PAL+ G V+ KP+ TA L+ + + ++AG+ PPG ++ +
Sbjct: 158 INAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV-VDAGILPPGALSIIC 216
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRL-----WLQVGKNINVYKNFPRLIGECGGK 315
D I + ++FTGS T L ++Q G +NV +
Sbjct: 217 GSSAGLLDQIRSFDV---VSFTGSADTAATLRAHPAFVQRGARLNV---------QADSL 264
Query: 316 NFHFIHASANVES-----VVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + A A ++ + +R GQKC+A R +VPE
Sbjct: 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPE 309
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGV-PPGVVNFVP 260
++ FNF + G PAL+ G V+ KP+ TA L+ + + ++AG+ PPG ++ +
Sbjct: 158 INAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV-VDAGILPPGALSIIC 216
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRL-----WLQVGKNINVYKNFPRLIGECGGK 315
D I + ++FTGS T L ++Q G +NV E
Sbjct: 217 GSSAGLLDQIRSFDV---VSFTGSADTAATLRAHPAFVQRGARLNV---------EADSL 264
Query: 316 NFHFIHASANVES-----VVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + A A ++ + +R GQK +A R +VPE
Sbjct: 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPE 309
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G + KP+ L+ + + + +P G VN V V G + + ++FTG
Sbjct: 175 GCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTG 234
Query: 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQ 343
S +L + + + +L E GG + A++E+ + I + F GQ
Sbjct: 235 STEVGRKLIVDTAEQVK------KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQ 288
Query: 344 KCSACSRMYVPE 355
C +R++V E
Sbjct: 289 TCVCANRIFVHE 300
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTP----ALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G + PFN+ NL TP + G++ + KPS+T ++ I KI+ EA P
Sbjct: 132 GVTYIIGPFNYPV---NLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEY 188
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
V V G + + P+ I FTGS P ++ +Q K+ ++ E GG
Sbjct: 189 VA--VIQGGRDENSHLLSLPF-DFIFFTGS-PNVGKVVMQAAA-----KHLTPVVLELGG 239
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
K + A+++ VN + F GQ A +YV
Sbjct: 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYV 278
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 19/157 (12%)
Query: 200 FVAAVSPFNFTAIGGNLAYTPALMGSSVLWK-----PSDTALLSNYTIYKIMIEAGVPPG 254
F A+ P F+A GG+ A A G V+ K P + +++ I + + + +P
Sbjct: 143 FGASNFPLAFSAAGGDTASALA-AGCPVIVKGHTAHPGTSQIVAE-CIEQALKQEQLPQA 200
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI---GE 311
+ + + G + + P + + FTGSV L+ N+ P I GE
Sbjct: 201 IFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALF-------NLAHERPEPIPFYGE 253
Query: 312 CGGKNFHFIHASA--NVESVVNGTIRSAFEYCGQKCS 346
G N FI SA + + + S CGQ C+
Sbjct: 254 LGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCT 290
>pdb|3OC6|A Chain A, Crystal Structure Of 6-Phosphogluconolactonase From
Mycobacterium Smegmatis, Apo Form
Length = 248
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 231 PSDTALLSNYTIYKIMIE-AGVPPGVVNFVPADGPVFGDTITAS----PYLAGINFTGSV 285
P D ++ + +++ G+PP V+ + A FGD + A+ L NF SV
Sbjct: 81 PQDDDERNDKQAREALLDHIGIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFDSSV 140
Query: 286 PTFNRLWLQVGKNINVYKNFP 306
P F+ L +G +V FP
Sbjct: 141 PGFDVHLLGMGGEGHVNSLFP 161
>pdb|1JY5|A Chain A, Rnase-Related Protein From Calystegia Sepium
pdb|1JY5|B Chain B, Rnase-Related Protein From Calystegia Sepium
Length = 212
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 15 QIEYLHFSLLILDRYNVQET-PEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYK 73
Q EY +L++ +YN+ E E YLP + + + + S + P V+ K
Sbjct: 116 QYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTP-VVKCKSDA 174
Query: 74 TEHVQYQPMVSLHVQYQP 91
E VQ +L +Q P
Sbjct: 175 VEQVQICFDKTLQLQECP 192
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,043,314
Number of Sequences: 62578
Number of extensions: 516366
Number of successful extensions: 1158
Number of sequences better than 100.0: 96
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 113
length of query: 428
length of database: 14,973,337
effective HSP length: 102
effective length of query: 326
effective length of database: 8,590,381
effective search space: 2800464206
effective search space used: 2800464206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)