Query psy1960
Match_columns 428
No_of_seqs 247 out of 2327
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 20:41:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3x_A Delta-1-pyrroline-5-car 100.0 4.3E-70 1.5E-74 579.8 32.2 339 15-374 16-377 (563)
2 3qan_A 1-pyrroline-5-carboxyla 100.0 6.9E-63 2.4E-67 522.7 33.8 323 30-374 5-350 (538)
3 2wme_A BADH, betaine aldehyde 100.0 1.1E-62 3.9E-67 515.5 28.6 288 61-374 5-315 (490)
4 4f9i_A Proline dehydrogenase/d 100.0 5.4E-61 1.8E-65 536.9 32.1 323 30-374 499-844 (1026)
5 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.1E-60 3.9E-65 504.0 29.6 323 30-374 5-351 (516)
6 3ifg_A Succinate-semialdehyde 100.0 1.6E-59 5.5E-64 491.5 27.8 286 63-374 13-320 (484)
7 3ed6_A Betaine aldehyde dehydr 100.0 3.6E-59 1.2E-63 492.5 30.2 288 61-374 31-342 (520)
8 3ek1_A Aldehyde dehydrogenase; 100.0 2.5E-59 8.4E-64 492.0 27.2 284 64-373 34-339 (504)
9 3k2w_A Betaine-aldehyde dehydr 100.0 7.1E-59 2.4E-63 488.2 30.4 289 60-374 10-320 (497)
10 3rh9_A Succinate-semialdehyde 100.0 5E-59 1.7E-63 489.9 29.1 287 61-373 10-318 (506)
11 4f3x_A Putative aldehyde dehyd 100.0 8E-59 2.7E-63 487.7 28.9 287 60-374 23-332 (498)
12 3u4j_A NAD-dependent aldehyde 100.0 1.1E-58 3.9E-63 489.5 29.6 289 61-374 21-333 (528)
13 3i44_A Aldehyde dehydrogenase; 100.0 8.9E-59 3E-63 487.2 28.3 287 61-374 24-332 (497)
14 3iwj_A Putative aminoaldehyde 100.0 1.9E-58 6.5E-63 485.6 29.8 287 61-373 6-322 (503)
15 4e4g_A Methylmalonate-semialde 100.0 1.2E-58 4.2E-63 488.5 28.2 288 60-374 24-334 (521)
16 2o2p_A Formyltetrahydrofolate 100.0 1E-58 3.5E-63 488.7 27.3 286 63-374 37-351 (517)
17 1bxs_A Aldehyde dehydrogenase; 100.0 2.8E-58 9.6E-63 483.8 29.6 286 62-373 20-331 (501)
18 1a4s_A ALDH, betaine aldehyde 100.0 2E-58 6.8E-63 485.3 28.4 287 60-373 17-325 (503)
19 2imp_A Lactaldehyde dehydrogen 100.0 3.2E-58 1.1E-62 481.4 28.7 288 60-373 4-313 (479)
20 1o04_A Aldehyde dehydrogenase, 100.0 2.7E-58 9.1E-63 483.9 27.5 285 63-373 20-330 (500)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 3E-58 1E-62 485.3 27.8 286 63-374 27-334 (515)
22 3b4w_A Aldehyde dehydrogenase; 100.0 5.4E-58 1.8E-62 481.2 28.9 284 63-373 9-316 (495)
23 3r31_A BADH, betaine aldehyde 100.0 3.3E-58 1.1E-62 484.9 27.0 286 61-374 13-321 (517)
24 2ve5_A BADH, betaine aldehyde 100.0 6.4E-58 2.2E-62 480.4 28.6 288 60-373 4-314 (490)
25 3jz4_A Succinate-semialdehyde 100.0 5.8E-58 2E-62 479.7 28.2 286 63-374 10-317 (481)
26 3prl_A NADP-dependent glyceral 100.0 4.1E-58 1.4E-62 483.1 26.9 286 61-374 10-322 (505)
27 1wnd_A Putative betaine aldehy 100.0 1E-57 3.4E-62 479.0 29.3 284 62-373 23-329 (495)
28 2w8n_A Succinate-semialdehyde 100.0 1E-57 3.5E-62 478.3 26.2 283 63-373 13-321 (487)
29 2j6l_A Aldehyde dehydrogenase 100.0 3.3E-57 1.1E-61 475.9 28.6 285 60-373 21-331 (500)
30 3r64_A NAD dependent benzaldeh 100.0 4.1E-57 1.4E-61 476.0 29.0 288 60-373 10-322 (508)
31 4dng_A Uncharacterized aldehyd 100.0 2.4E-57 8.3E-62 475.5 26.6 287 61-373 5-315 (485)
32 1t90_A MMSDH, probable methylm 100.0 3.9E-57 1.3E-61 473.9 28.1 286 61-374 4-312 (486)
33 1euh_A NADP dependent non phos 100.0 4.1E-57 1.4E-61 472.6 27.6 283 62-374 4-313 (475)
34 3ty7_A Putative aldehyde dehyd 100.0 1.8E-57 6.1E-62 475.7 24.5 287 62-374 7-311 (478)
35 3pqa_A Lactaldehyde dehydrogen 100.0 2.5E-57 8.6E-62 475.0 25.6 279 65-374 2-304 (486)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 1E-56 3.5E-61 472.1 26.9 283 61-374 17-326 (501)
37 3ju8_A Succinylglutamic semial 100.0 4.5E-56 1.5E-60 466.3 28.9 283 64-374 7-312 (490)
38 3ros_A NAD-dependent aldehyde 100.0 7.2E-56 2.5E-60 463.8 24.9 265 90-373 8-293 (484)
39 3v4c_A Aldehyde dehydrogenase 100.0 2.3E-55 7.9E-60 464.8 24.7 289 54-373 21-352 (528)
40 3etf_A Putative succinate-semi 100.0 6.3E-54 2.2E-58 447.1 25.9 265 90-373 11-296 (462)
41 2y53_A Aldehyde dehydrogenase 100.0 3.4E-54 1.2E-58 456.4 23.2 282 62-374 7-328 (534)
42 1ez0_A ALDH, aldehyde dehydrog 100.0 7.1E-54 2.4E-58 451.7 21.9 266 90-373 11-318 (510)
43 3lns_A Benzaldehyde dehydrogen 100.0 5E-53 1.7E-57 439.7 24.3 263 90-373 10-298 (457)
44 4h7n_A Aldehyde dehydrogenase; 100.0 3.2E-53 1.1E-57 443.0 22.1 263 90-373 10-294 (474)
45 3haz_A Proline dehydrogenase; 100.0 1.4E-50 4.9E-55 451.8 26.4 287 31-373 513-822 (1001)
46 3sza_A Aldehyde dehydrogenase, 100.0 5.9E-50 2E-54 417.6 22.3 248 105-372 14-287 (469)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 6.4E-49 2.2E-53 409.1 15.7 263 90-377 11-313 (463)
48 3my7_A Alcohol dehydrogenase/a 100.0 1E-47 3.4E-52 399.3 21.6 245 103-368 1-269 (452)
49 3k9d_A LMO1179 protein, aldehy 100.0 5.3E-47 1.8E-51 395.0 19.3 245 103-369 6-275 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 1.5E-46 5.2E-51 389.6 21.8 244 108-374 25-308 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 2.9E-46 1E-50 385.6 18.3 246 109-377 14-299 (427)
52 1vlu_A Gamma-glutamyl phosphat 100.0 3.9E-46 1.3E-50 388.6 17.1 239 111-374 17-298 (468)
53 2xw6_A MGS, methylglyoxal synt 50.8 9.4 0.00032 32.3 2.9 69 222-300 29-106 (134)
54 3e2i_A Thymidine kinase; Zn-bi 46.0 30 0.001 31.7 5.7 69 347-425 101-175 (219)
55 2ioj_A Hypothetical protein AF 43.5 30 0.001 28.7 5.0 45 254-298 53-97 (139)
56 1b93_A Protein (methylglyoxal 40.4 29 0.001 29.9 4.4 114 198-342 11-135 (152)
57 2yvq_A Carbamoyl-phosphate syn 36.6 41 0.0014 28.2 4.8 67 224-300 50-126 (143)
58 3pzy_A MOG; ssgcid, seattle st 34.3 25 0.00087 30.4 3.1 50 238-288 28-79 (164)
59 3iwt_A 178AA long hypothetical 33.3 34 0.0012 29.6 3.9 52 237-288 40-94 (178)
60 1g1p_A Conotoxin EVIA; three d 30.0 7.3 0.00025 23.8 -0.8 14 391-404 2-15 (33)
61 3rfq_A Pterin-4-alpha-carbinol 30.0 26 0.00087 31.1 2.4 52 237-288 49-102 (185)
62 1xx6_A Thymidine kinase; NESG, 26.2 1E+02 0.0036 27.0 5.8 68 348-425 82-155 (191)
63 1y5e_A Molybdenum cofactor bio 22.7 59 0.002 28.0 3.4 53 236-288 30-85 (169)
64 1k87_A PUTA, proline dehydroge 22.5 18 0.00063 38.6 0.0 52 32-95 617-668 (669)
65 2zfz_A Arginine repressor; DNA 22.0 1.6E+02 0.0054 22.0 5.3 36 224-263 21-56 (79)
66 2pjk_A 178AA long hypothetical 21.5 44 0.0015 29.2 2.3 53 236-288 39-94 (178)
67 1vmd_A MGS, methylglyoxal synt 21.1 81 0.0028 27.8 3.9 116 196-342 25-151 (178)
68 2ab9_A Pro-SFTI-1; protein, be 20.7 30 0.001 20.8 0.7 11 390-400 18-28 (31)
69 2j9r_A Thymidine kinase; TK1, 20.6 1.1E+02 0.0038 27.6 4.9 68 348-425 102-175 (214)
70 2i2c_A Probable inorganic poly 20.2 1.3E+02 0.0045 27.8 5.5 88 227-338 5-95 (272)
No 1
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.3e-70 Score=579.82 Aligned_cols=339 Identities=46% Similarity=0.755 Sum_probs=311.3
Q ss_pred hhhhhhhhccccCCCccCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCC
Q psy1960 15 QIEYLHFSLLILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~ 94 (428)
--.|.+++++++.+++++|||+++|.++|++|+++++++++++++..++|++|||+|+.+.+... ++||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~nep~~~~~~~~~~r~~~~~a~~~~~~~~~~~~~~I~G~~~~~~~~~~----------~~~P~ 85 (563)
T 4e3x_A 16 PRGSHMLRWKHTSSLKVANEPILAFSQGSPERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQY----------QLSPF 85 (563)
T ss_dssp ----CCCCCCCCCCCCCCCCCCCCCCTTCHHHHHHHHHHHTTTTCCEECCEEETTEEECCSCEEE----------EEETT
T ss_pred cCCcccccccccCCCCcCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccCCeEECCEEeecCCcee----------eeCCC
Confidence 34688899999999999999999999999999999999999988888999999999998876544 78999
Q ss_pred CCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhc-cchhHHHHHHHhcCCC
Q psy1960 95 NHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGN-YYINDKSTGSVVGQQP 171 (428)
Q Consensus 95 ~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~-~~~~~~~~~~l~~gkp 171 (428)
++++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++ ++ ....+..++.||+
T Consensus 86 ~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~-------~iL~~~-a~~--l~~~~~~-el~~~~~~e~Gk~ 154 (563)
T 4e3x_A 86 NHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRA-------QVFLKA-ADM--LSGPRRA-EVLAKTMVGQGKT 154 (563)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHTTTHH-HHHHHHHHHHCCC
T ss_pred CCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhccHH-HHHHHHHHHcCCC
Confidence 8779999999999999 99999999 99999999999999 999999 999 9988 66 5666677899999
Q ss_pred CCcccch-------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcCCCEEEEeC
Q psy1960 172 FGGGRMS-------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKP 231 (428)
Q Consensus 172 ~~~~~~~-------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKP 231 (428)
+.+++.+ .++|++.. +..+.+.+++|+|||++|+|||||+....++++|||+||+||+||
T Consensus 155 ~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apALaGNtVVlKP 234 (563)
T 4e3x_A 155 VIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKP 234 (563)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhhcCCEEEEEC
Confidence 8776543 45555431 123467889999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEe
Q psy1960 232 SDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311 (428)
Q Consensus 232 s~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lE 311 (428)
|+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++++++++++|+++||+++|
T Consensus 235 s~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lE 314 (563)
T 4e3x_A 235 SDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGE 314 (563)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEE
T ss_pred CCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceecc
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 312 lGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|||||+||++|||+|.|++.+++++|.|+||+|++++|+|||+++||+|+++|+++++++++
T Consensus 315 lGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 315 CGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred CCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999998764
No 2
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=6.9e-63 Score=522.73 Aligned_cols=323 Identities=20% Similarity=0.264 Sum_probs=291.4
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
.+.|||.++|. ++.+|++++++++++++. ...++++|||+|+.++.... ++||+++++++++++.++.
T Consensus 5 ~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~----------~~nP~t~~~~i~~~~~~~~ 73 (538)
T 3qan_A 5 PYKHEPFTDFT-VEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKIQ----------SWNPARKDQLVGSVSKANQ 73 (538)
T ss_dssp CCCCCCCCCTT-SHHHHHHHHHHHHHHHHHTTEEECEEETTEEECCSSEEE----------EECSSSTTCEEEEEECBCH
T ss_pred ccCCCcccccC-CcHHHHHHHHHHHHhhhccCcccceeECCEEecCCCeEE----------EECCCCCCcEEEEEcCCCH
Confidence 67899999998 899999999999887654 46789999999998444444 7899987899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------AL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l 180 (428)
++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||..+++.+ .+
T Consensus 74 ~dv~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l 142 (538)
T 3qan_A 74 DLAEKAIQSADEAFQTWRNVNPEERA-------NILVKA-AAI--IRRRKH-EFSAWLVHEAGKPWKEADADTAEAIDFL 142 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999988 77778899999998876643 45
Q ss_pred hhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 181 TFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 181 ~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+|++.. .+...+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~ 222 (538)
T 3qan_A 143 EYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVL 222 (538)
T ss_dssp HHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH
Confidence 555432 1223466788899999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.++++...|+.++|+++|+|||||+||++|||+
T Consensus 223 ~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl 302 (538)
T 3qan_A 223 EDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADL 302 (538)
T ss_dssp HHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCH
T ss_pred HHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCH
Confidence 99999999999999988889999999999999999999999999999999884334444599999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 303 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 303 DLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999998764
No 3
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.1e-62 Score=515.51 Aligned_cols=288 Identities=21% Similarity=0.276 Sum_probs=262.7
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
.+.++||||+|+++.+..+++ ++||+| ++++++++.++.+| ++||++|+ ||+.|+++|..+|.
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~------ 69 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFE--------TINPAN-GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS------ 69 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred CCCcEEECCeeeCCCCCCEEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH------
Confidence 456799999999876655444 899999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...++|||+.+++. +.++|++.. .....+.++.|+|
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G 144 (490)
T 2wme_A 70 -RILRRA-VDI--LRERND-ELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLG 144 (490)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECS
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEeccee
Confidence 999999 999 999988 7778888999999877654 356676541 1233567788999
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++
T Consensus 145 Vv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~ 224 (490)
T 2wme_A 145 VVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEK 224 (490)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCE
T ss_pred EEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCChhhHHHHHHHH-hcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQV-GKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~-a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+++|+.+++.+ +++++ |+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 225 I~FTGS~~~G~~i~~~~a~~~lk------~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i 298 (490)
T 2wme_A 225 ISFTGGTSTGKKVMASASSSSLK------EVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298 (490)
T ss_dssp EEEESCHHHHHHHHHHHHHHHCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred EEEECChHHHHHHHHhhhccCCc------eEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhH
Confidence 99999999999987754 55666 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 299 ~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 299 QARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 99999999999998653
No 4
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=5.4e-61 Score=536.86 Aligned_cols=323 Identities=22% Similarity=0.323 Sum_probs=292.9
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
.+.|||.++|.. +.+|++++++++++++. ...+|++|||+|+.++.... ++||+++++++++++.++.
T Consensus 499 ~~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~----------v~nPa~~~~~i~~v~~a~~ 567 (1026)
T 4f9i_A 499 PFNNEAMVDFTR-ADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRTNDLIP----------TVNPNKPSEVLGQICQAGT 567 (1026)
T ss_dssp CCCCCCCCCTTS-HHHHHHHHHHHHHHHTTCCEEECEEETTEEECCSCEEE----------EEETTEEEEEEEEEECCCH
T ss_pred CCCCCCCCCCCC-HHHHHHHHHHHHHHhhccccccCceECCEEecCCCcEE----------EeCCCCCCceEEEEeCCCH
Confidence 589999999986 77999999999998766 46889999999998765554 8899987899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SAL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l 180 (428)
++ ++|+++|+ |++.|+.+|.++|+ ++|+++ +++ |+++.+ ....+...+.||++.++.. +.+
T Consensus 568 ~dv~~Av~aA~~A~~~W~~~~~~eRa-------~iL~~~-Adl--l~~~~~-eLa~~~~~E~GK~~~ea~~Ev~~aid~l 636 (1026)
T 4f9i_A 568 TEVGDAIAAAKAAFPAWRDTDPRTRA-------EYLLKA-AQA--ARKRLF-ELSAWQVLEIGKQWDQAYADVTEAIDFL 636 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCChhhHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999887 7777888999999877654 456
Q ss_pred hhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 181 TFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 181 ~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+|++.. .+......+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++
T Consensus 637 r~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell 716 (1026)
T 4f9i_A 637 EYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELF 716 (1026)
T ss_dssp HHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHH
Confidence 776541 1112345567799999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
+++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+++....|++++|+++|+|||||+||++|||+
T Consensus 717 ~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADl 796 (1026)
T 4f9i_A 717 REAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADL 796 (1026)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCH
T ss_pred HHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCH
Confidence 99999999999999999999999999999999999999999999999998655445667799999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++|+|.|+||+|+|++|+|||++++|+|+++|++++++++|
T Consensus 797 d~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 797 DEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999998763
No 5
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.1e-60 Score=503.97 Aligned_cols=323 Identities=23% Similarity=0.278 Sum_probs=282.2
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
+|.|+|.++|... ..|+++.+++.+++.. ...++++|||+|+.++.... ++||+++++++++++.++.
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~----------~~nP~~t~~~i~~~~~~~~ 73 (516)
T 1uzb_A 5 PFRNEPIETFQTE-EARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMV----------SLNPSAPSEVVGTTAKAGK 73 (516)
T ss_dssp CCCCCCCCCCCSH-HHHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEE----------EEETTEEEEEEEEEECCCH
T ss_pred cccccccccccch-hhhhhHHHHHHHhhhhhccccceeECCEEecCCCeEE----------EECCCCCCcEEEEEeCCCH
Confidence 5799999999864 4478888888766543 34678999999997644444 7899933899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------AL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l 180 (428)
++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||+.+++.| .+
T Consensus 74 ~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~ 142 (516)
T 1uzb_A 74 AEAEAALEAAWKAFKTWKDWPQEDRS-------RLLLKA-AAL--MRRRKR-ELEATLVYEVGKNWVEASADVAEAIDFI 142 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999988 77778889999998776542 45
Q ss_pred hhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 181 TFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 181 ~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
+|++.. .+...+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l 222 (516)
T 1uzb_A 143 EYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEI 222 (516)
T ss_dssp HHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHH
Confidence 555431 0112356778899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
++++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+++++++...+++++|+++|+|||||+||++|||
T Consensus 223 ~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dAD 302 (516)
T 1uzb_A 223 FHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETAD 302 (516)
T ss_dssp HHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSC
T ss_pred HHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCC
Confidence 99999999999999998888999999999999999999999999999999832222223339999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 303 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 303 FDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999998763
No 6
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.6e-59 Score=491.51 Aligned_cols=286 Identities=21% Similarity=0.266 Sum_probs=262.2
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. +
T Consensus 13 ~~~~I~G~~~~~~~~~~~~--------v~~P~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~-------~ 76 (484)
T 3ifg_A 13 HQAYIGGEWQAADSDATFE--------VFDPAT-GESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA-------A 76 (484)
T ss_dssp CSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHH-------H
T ss_pred cceeECCEEeeCCCCCEEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 4689999999765543333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+|||
T Consensus 77 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 152 (484)
T 3ifg_A 77 ILRRW-FDL--VIANSD-DLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVC 152 (484)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEE
Confidence 99999 999 999988 7777888999999887654 356666541 122346678889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++++|+.||+|++|+
T Consensus 153 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~ 232 (484)
T 3ifg_A 153 AAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLS 232 (484)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEE
T ss_pred EEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998889999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 233 FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (484)
T 3ifg_A 233 FTGSTAVGRLLMAQSAPTVK------KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306 (484)
T ss_dssp EESCHHHHHHHHHHTGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHH
T ss_pred EECCHHHHHHHHHHhhccCC------ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 307 f~~~l~~~~~~~~~ 320 (484)
T 3ifg_A 307 FADKLAAAVSKLKV 320 (484)
T ss_dssp HHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998753
No 7
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.6e-59 Score=492.49 Aligned_cols=288 Identities=18% Similarity=0.241 Sum_probs=263.4
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc--CccccCChhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL--CPYEKNSVGLLINTEV 136 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~--~~W~~~~~~~R~~~~~ 136 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ || +.|+.++..+|.
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~---- 97 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRD--------IINPYN-QEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRG---- 97 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHH----
T ss_pred cCCceEECCEEecCCCCCEEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHH----
Confidence 356899999999865543333 789999 89999999999999 99999999 99 999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .....+..+.|
T Consensus 98 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P 170 (520)
T 3ed6_A 98 ---KKVRAI-ADK--IKEHRE-ALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEP 170 (520)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccC
Confidence 999999 999 999988 7778889999999887654 346666531 11234667888
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+.+..++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|
T Consensus 171 ~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~v 250 (520)
T 3ed6_A 171 VGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250 (520)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTC
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCc
Confidence 99999999999999999999999999 99999999999999999999999999999999999999888999999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 251 d~V~FTGS~~vG~~i~~~aa~~l~------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~ 324 (520)
T 3ed6_A 251 DLVSFTGGIETGKHIMKNAANNVT------NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNS 324 (520)
T ss_dssp SEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHH
T ss_pred CEEEEECCHHHHHHHHHHhhhcCC------CEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 325 i~d~f~~~l~~~~~~l~v 342 (520)
T 3ed6_A 325 IKDKFEQALIDRVKKIKL 342 (520)
T ss_dssp HHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999998753
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.5e-59 Score=492.04 Aligned_cols=284 Identities=20% Similarity=0.276 Sum_probs=261.4
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
++||||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++
T Consensus 34 ~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~-------~~ 97 (504)
T 3ek1_A 34 QCLVNGRWIDAADGTTIK--------VTNPAD-GSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA-------GI 97 (504)
T ss_dssp SEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HH
T ss_pred CeEECCEEeeCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHH-------HH
Confidence 689999999875544433 789998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+|||+
T Consensus 98 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~ 173 (504)
T 3ek1_A 98 LRKW-FDL--IIANAD-DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTA 173 (504)
T ss_dssp HHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEE
T ss_pred HHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEE
Confidence 9999 999 999988 7778889999999887654 346666531 1123467788999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+|
T Consensus 174 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~F 253 (504)
T 3ek1_A 174 AITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSF 253 (504)
T ss_dssp EECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEE
Confidence 999999999999999999998 9999999999999999999999999999999999999988899999999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHH
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFC 361 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f 361 (428)
|||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 254 TGS~~~G~~i~~~aa~~lk------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f 327 (504)
T 3ek1_A 254 TGSTEVGRLLMAQCAPTIK------RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKF 327 (504)
T ss_dssp ESCHHHHHHHHHHHGGGTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHH
T ss_pred ECCHHHHHHHHHhhhhhcC------CeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHH
Confidence 9999999999999999888 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy1960 362 SCFLLLFLFSAS 373 (428)
Q Consensus 362 ~~~L~~~l~~l~ 373 (428)
+++|++++++++
T Consensus 328 ~~~l~~~~~~~~ 339 (504)
T 3ek1_A 328 AEKLAAKVKELK 339 (504)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhhcc
Confidence 999999999865
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=7.1e-59 Score=488.21 Aligned_cols=289 Identities=19% Similarity=0.265 Sum_probs=264.1
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
....+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~----- 75 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTID--------ILSPST-GKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ----- 75 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEE--------EECSSS-CSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-----
T ss_pred ccccceeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 4557899999999876544433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .....+..+.|+
T Consensus 76 --~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 149 (497)
T 3k2w_A 76 --NMLRTF-ANK--IRENKH-ILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPR 149 (497)
T ss_dssp --HHHHHH-HHH--HHTTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCC
Confidence 999999 999 999988 7777888999999887654 245555431 122346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+
T Consensus 150 GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd 229 (497)
T 3k2w_A 150 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITK 229 (497)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEE
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 230 ~I~fTGS~~~G~~i~~~aa~~l~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 303 (497)
T 3k2w_A 230 MITMTGSTVAGKQIYKTSAEYMT------PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASV 303 (497)
T ss_dssp EEEEESCHHHHHHHHHHHTTTTC------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTT
T ss_pred EEEEECcHHHHHHHHHHhhhcCC------CeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 304 ~d~f~~~l~~~~~~~~v 320 (497)
T 3k2w_A 304 YDEFMAKFLPLVKGLKV 320 (497)
T ss_dssp HHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999998764
No 10
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5e-59 Score=489.92 Aligned_cols=287 Identities=17% Similarity=0.168 Sum_probs=262.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~--------v~~P~t-g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 74 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFD--------VYNPAT-GSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRR------ 74 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHH------
T ss_pred cccCeeECCEEeeCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH------
Confidence 446899999999865443333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------ccccceeee-cccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------LASNLGRGE-GLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~-~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+ .|+|
T Consensus 75 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~G 149 (506)
T 3rh9_A 75 -KWLEDI-RDG--LKENRE-EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVG 149 (506)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECC
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccce
Confidence 999999 999 999988 7778889999999887664 245555431 123345667 8899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++
T Consensus 150 VV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~ 229 (506)
T 3rh9_A 150 VTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPM 229 (506)
T ss_dssp SEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCE
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCE
Confidence 999999999999999999999999 9999999999999999999999999999999999999988899999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 230 I~FTGS~~vG~~i~~~aa~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 303 (506)
T 3rh9_A 230 LSFTGSTEVGRKLIVDTAEQVK------KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVA 303 (506)
T ss_dssp EEEESCHHHHHHHHHHTTTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTH
T ss_pred EEEECCHHHHHHHHHHhhhcCC------ceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHH
Confidence 9999999999999999999888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 304 d~f~~~l~~~~~~~~ 318 (506)
T 3rh9_A 304 DAFGQKLAERVNKMT 318 (506)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999875
No 11
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=8e-59 Score=487.66 Aligned_cols=287 Identities=18% Similarity=0.295 Sum_probs=263.3
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+...+++|||+|+.+.+. .++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~----- 87 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEH--------ILNPRT-GAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS----- 87 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHH-----
T ss_pred ccccCeeECCEEeeCCCC-eEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 455689999999987764 333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcc-cc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-RM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~-~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++ +. +.++|++.. .+...+..+.|
T Consensus 88 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (498)
T 4f3x_A 88 --NALLKI-ADA--IEKEAD-EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDP 161 (498)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEE
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcC
Confidence 999999 999 999988 77778899999998877 43 345666531 12335677889
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+++++|+.||+|
T Consensus 162 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v 240 (498)
T 4f3x_A 162 IGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKV 240 (498)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTC
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999 99999999999988899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 241 ~~V~FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 314 (498)
T 4f3x_A 241 GMVSITGDIATGKKVLAAAAKTVK------RTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAG 314 (498)
T ss_dssp CEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETT
T ss_pred CEEEEECCHHHHHHHHHHHHhhCC------ceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 315 i~d~f~~~l~~~~~~~~v 332 (498)
T 4f3x_A 315 IYEKLVADLTSAVSTIRY 332 (498)
T ss_dssp THHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999999998753
No 12
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-58 Score=489.47 Aligned_cols=289 Identities=20% Similarity=0.228 Sum_probs=263.4
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc--CccccCChhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL--CPYEKNSVGLLINTEV 136 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~--~~W~~~~~~~R~~~~~ 136 (428)
...+++|||+|+.+.+...++ ++||+++++++++++.++.++ ++|+++|+ || ..|+.++.++|.
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~---- 88 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTID--------RVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERS---- 88 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEE--------EECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHH----
T ss_pred cccceeECCEEecCCCCCEEE--------EeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHH----
Confidence 346899999999876543333 789998679999999999999 99999999 99 899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .+...+..+.|
T Consensus 89 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (528)
T 3u4j_A 89 ---RLMFKV-ADL--ILARQE-ELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREP 161 (528)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEecc
Confidence 999999 999 999988 7777889999999887653 345665431 12235677888
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|
T Consensus 162 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v 241 (528)
T 3u4j_A 162 VGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNV 241 (528)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTC
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 242 d~I~FTGS~~~G~~i~~~aa~~lk------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 315 (528)
T 3u4j_A 242 DMVAFTGSVRVGTKLGEIAARTVK------RVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEG 315 (528)
T ss_dssp CEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGG
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCC------ceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEech
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 316 i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 316 IRDALMERLLDISRKVAF 333 (528)
T ss_dssp GHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 999999999999998753
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=8.9e-59 Score=487.20 Aligned_cols=287 Identities=21% Similarity=0.248 Sum_probs=262.0
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++..+|.
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 88 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLY--------VIDPST-EEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL------ 88 (497)
T ss_dssp EECCEEETTEEECCSSCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHH------
Confidence 456899999999876644433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-ch------hhhhhhcc---------c--cccceee-ecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-MS------ALTFYLEV---------L--ASNLGRG-EGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~~------~l~~~~~~---------~--~~~~~~~-~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++ .+ .+++++.. . +...+.+ +.|+|
T Consensus 89 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G 163 (497)
T 3i44_A 89 -GFVEKI-LEI--YEKRSS-DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIG 163 (497)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESSTTCSSCEEEEEECC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCceeEEEeecCce
Confidence 999999 999 999988 777888999999988776 32 34444421 1 2234566 88899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++
T Consensus 164 Vv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~ 243 (497)
T 3i44_A 164 VVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEM 243 (497)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCE
T ss_pred EEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999988899999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|.+.++++++ |+++|+|||||+||++||| |.|++.+++++|.|+||.|++++|+|||++++
T Consensus 244 I~FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~ 316 (497)
T 3i44_A 244 ISFTGSTRAGKDISKNASNTLK------RVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIY 316 (497)
T ss_dssp EEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGH
T ss_pred EEEeCcHHHHHHHHHHHhhcCC------ceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHH
Confidence 9999999999999999999888 8999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCc
Q psy1960 359 CFCSCFLLLFLFSASV 374 (428)
Q Consensus 359 d~f~~~L~~~l~~l~v 374 (428)
|+|+++|+++++++++
T Consensus 317 d~f~~~l~~~~~~~~v 332 (497)
T 3i44_A 317 DKAIKTAKDIAEKTQV 332 (497)
T ss_dssp HHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999998764
No 14
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.9e-58 Score=485.63 Aligned_cols=287 Identities=20% Similarity=0.248 Sum_probs=261.8
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-----ccccCChhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-----PYEKNSVGLLIN 133 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-----~W~~~~~~~R~~ 133 (428)
...+++|||+|+.+.+...++ ++||+| ++++++++.++.++ ++|+++|+ ||+ .|+.++..+|.
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~- 75 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIP--------VINPAT-QNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRA- 75 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHH-
T ss_pred CCCceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHH-
Confidence 345799999999875544333 789999 89999999999999 99999999 998 99999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc----------------ccccc
Q psy1960 134 TEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV----------------LASNL 191 (428)
Q Consensus 134 ~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~----------------~~~~~ 191 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++.+ .++|++.. .....
T Consensus 76 ------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 145 (503)
T 3iwj_A 76 ------RYLRAI-AAK--VTEKKP-ELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKS 145 (503)
T ss_dssp ------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEE
T ss_pred ------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccc
Confidence 999999 999 999988 77778899999998876542 45555421 11234
Q ss_pred eeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhh
Q psy1960 192 GRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI 270 (428)
Q Consensus 192 ~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L 270 (428)
+..+.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|
T Consensus 146 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L 225 (503)
T 3iwj_A 146 HVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPL 225 (503)
T ss_dssp EEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHH
T ss_pred eEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHH
Confidence 66788899999999999999999999999998 99999999999999999999999999999999999999888899999
Q ss_pred hcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCce
Q psy1960 271 TASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSR 350 (428)
Q Consensus 271 ~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~sr 350 (428)
+.||+|++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|
T Consensus 226 ~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~r 299 (503)
T 3iwj_A 226 ATHPDVDKVAFTGSSATGSKIMTAAAQLVK------PVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSR 299 (503)
T ss_dssp HTCTTCCEEEEESCHHHHHHHHHHHGGGTC------CEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEE
T ss_pred hhCCCccEEEEECcHHHHHHHHHHHhcCCC------CEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCe
Confidence 999999999999999999999999999888 89999999999999999999999999999999999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhcCC
Q psy1960 351 MYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 351 v~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|||++++|+|+++|++++++++
T Consensus 300 vlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 300 LILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCC
T ss_pred eEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999865
No 15
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-58 Score=488.50 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=262.4
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~----- 89 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSN--------IFNPAT-GEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA----- 89 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-----
T ss_pred hhccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 5678999999999876544433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+
T Consensus 90 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 163 (521)
T 4e4g_A 90 --RVFMKF-VQL--LNDNMN-ELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPV 163 (521)
T ss_dssp --HHHHHH-HHH--HHHHHH-HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCC
Confidence 999999 999 999988 7777889999999877654 345666531 112346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.+++|+.||+|+
T Consensus 164 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~~~~L~~~p~vd 242 (521)
T 4e4g_A 164 GIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDK-GAVDAILTHPDIA 242 (521)
T ss_dssp CEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCC
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCCh-HHHHHHHhCCCcC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999954 5679999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC-
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES- 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s- 356 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 243 ~I~FTGS~~vG~~i~~~aa~~lk------pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~ 316 (521)
T 4e4g_A 243 AVSFVGSTPIARYVYGTAAMNGK------RAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEE 316 (521)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHH
T ss_pred EEEEECCHHHHHHHHHHHhhcCC------CeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCch
Confidence 99999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 317 i~d~f~~~l~~~~~~~~v 334 (521)
T 4e4g_A 317 TANRLIDKLVPMVESLRI 334 (521)
T ss_dssp HHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999998764
No 16
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1e-58 Score=488.68 Aligned_cols=286 Identities=19% Similarity=0.263 Sum_probs=260.0
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|..+|.
T Consensus 37 ~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~------ 101 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYN--------TINPTD-GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRG------ 101 (517)
T ss_dssp CSEEETTEEECCGGGCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHH------
T ss_pred CCeEECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHH------
Confidence 4689999999764333323 789999 89999999999999 99999999 998 89999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhcc----------c-----c-ccceeee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEV----------L-----A-SNLGRGE 195 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~----------~-----~-~~~~~~~ 195 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++ . +.++|++.. . . ...+..+
T Consensus 102 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~ 176 (517)
T 2o2p_A 102 -RLLYRL-ADV--MEQHQE-ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKK 176 (517)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEE
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEe
Confidence 999999 999 999988 777888899999987765 3 346666431 0 1 1236778
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||
T Consensus 177 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~ 256 (517)
T 2o2p_A 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHP 256 (517)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCT
T ss_pred cCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCC
Confidence 8899999999999999999999999998 999999999999999999999999999999999999998888999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
+|++|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 257 ~v~~V~FTGS~~~G~~I~~~aa~~~lk------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V 330 (517)
T 2o2p_A 257 DVRKIGFTGSTEVGKHIMKSCALSNVK------KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFV 330 (517)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHTCC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHhHHhcCC------eEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEE
Confidence 9999999999999999999999 8887 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 331 ~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 331 EESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp EHHHHHHHHHHHHHHHTTCCB
T ss_pred eHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999998764
No 17
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.8e-58 Score=483.84 Aligned_cols=286 Identities=22% Similarity=0.256 Sum_probs=259.4
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhh
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEV 136 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~ 136 (428)
..+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~---- 86 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFP--------VFNPAT-EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERG---- 86 (501)
T ss_dssp CCSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH----
T ss_pred ccCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHH----
Confidence 45789999999875433323 789998 89999999999999 99999999 999 89999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|++.. .+...+..+.|
T Consensus 87 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 159 (501)
T 1bxs_A 87 ---RLLNKL-ADL--IERDRL-LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 159 (501)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecC
Confidence 999999 999 999988 7777888999999876432 345666531 11223567788
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v 239 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 277 AGINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
++|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+
T Consensus 240 ~~I~FTGS~~~G~~i~~~aa~~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~ 313 (501)
T 1bxs_A 240 DKVAFTGSTEVGKLIKEAAGKSNLK------RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 313 (501)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEH
T ss_pred CEEEEECCHHHHHHHHHHhhhccCC------cEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEch
Confidence 99999999999999999999 8887 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCC
Q psy1960 356 SLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|+++|++++++++
T Consensus 314 ~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 314 SIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 999999999999999865
No 18
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2e-58 Score=485.35 Aligned_cols=287 Identities=19% Similarity=0.252 Sum_probs=260.5
Q ss_pred CcccCeEEcCEEeecCCeee-eccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQY-QPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEV 136 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~-~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~ 136 (428)
+..++++|||+|+.+.+... ++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~---- 83 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEP--------VFEPAT-GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS---- 83 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEE--------EECTTT-CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHH----
T ss_pred ccccceeECCEEecCCCCCceEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHH----
Confidence 34567899999997654322 23 789999 89999999999999 99999999 99999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------ccccceeeeccc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .....+..+.|+
T Consensus 84 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 156 (503)
T 1a4s_A 84 ---RVMLEA-ARI--IRERRD-NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPL 156 (503)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEEC
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecC
Confidence 999999 999 999988 7777888999999876654 345665431 112245678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ +++++|+.||+|+
T Consensus 157 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~ 235 (503)
T 1a4s_A 157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVA 235 (503)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCC
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999988 8999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 236 ~V~FTGS~~~G~~i~~~aa~~~~------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 309 (503)
T 1a4s_A 236 KVSFTGSVPTGKKVMEMSAKTVK------HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309 (503)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGG
T ss_pred EEEEeCCHHHHHHHHHHhhhcCC------ceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 310 ~d~f~~~l~~~~~~~~ 325 (503)
T 1a4s_A 310 MPQFLEEVVKRTKAIV 325 (503)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999875
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=3.2e-58 Score=481.43 Aligned_cols=288 Identities=19% Similarity=0.212 Sum_probs=261.6
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~--------v~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 69 (479)
T 2imp_A 4 PVQHPMYIDGQFVTWRGDAWID--------VVNPAT-EAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA----- 69 (479)
T ss_dssp CEECCEEETTEEECCCCSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred CcccceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-----
Confidence 4567899999999764433323 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+
T Consensus 70 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 143 (479)
T 2imp_A 70 --SWLRKI-SAG--IRERAS-EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRAL 143 (479)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEecc
Confidence 999999 999 999988 7777888999999877653 345665531 011235677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+++++|+.||+++
T Consensus 144 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~ 223 (479)
T 2imp_A 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223 (479)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEE
T ss_pred ceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 224 ~V~fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i 297 (479)
T 2imp_A 224 MVSMTGSVSAGEKIMATAAKNIT------KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGI 297 (479)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGG
T ss_pred EEEEeCCHHHHHHHHHHHhccCC------cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhh
Confidence 99999999999999999998888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 298 ~d~f~~~l~~~~~~~~ 313 (479)
T 2imp_A 298 YDQFVNRLGEAMQAVQ 313 (479)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999875
No 20
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.7e-58 Score=483.91 Aligned_cols=285 Identities=22% Similarity=0.248 Sum_probs=258.9
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhhh
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEVL 137 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~~ 137 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~----- 85 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFP--------TVNPST-GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRG----- 85 (500)
T ss_dssp CSEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH-----
T ss_pred cCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHH-----
Confidence 3689999999864433323 789998 89999999999999 99999999 999 89999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|++.. .+...+..+.|+
T Consensus 86 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 159 (500)
T 1o04_A 86 --RLLNRL-ADL--IERDRT-YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPV 159 (500)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecC
Confidence 999999 999 999988 7778888999999876532 346666531 112235677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|+
T Consensus 160 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~ 239 (500)
T 1o04_A 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239 (500)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCC
T ss_pred CcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 240 ~I~FTGS~~~G~~i~~~aa~~~l~------pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 313 (500)
T 1o04_A 240 KVAFTGSTEIGRVIQVAAGSSNLK------RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 313 (500)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred EEEEECCHHHHHHHHHhhhhhcCc------eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehh
Confidence 9999999999999999999 8887 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 314 i~d~f~~~l~~~~~~~~ 330 (500)
T 1o04_A 314 IYDEFVERSVARAKSRV 330 (500)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999999865
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3e-58 Score=485.26 Aligned_cols=286 Identities=20% Similarity=0.248 Sum_probs=260.0
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. +
T Consensus 27 ~~~~i~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~ 90 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFP--------SLDPAT-NEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK-------R 90 (515)
T ss_dssp BCEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------H
T ss_pred cCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 5689999999865433333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-----c--------cccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-----L--------ASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-----~--------~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. + +...+..+.|+|||
T Consensus 91 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 166 (515)
T 2d4e_A 91 YLLRI-AEL--IEKHAD-ELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPV 166 (515)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCce
Confidence 99999 999 999988 7777888999999876653 245555431 0 11235677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||+|++|+
T Consensus 167 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~ 246 (515)
T 2d4e_A 167 GIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLT 246 (515)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 247 FTGS~~~G~~I~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 320 (515)
T 2d4e_A 247 LTGETETGKIVMRNAADHLK------RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320 (515)
T ss_dssp EESCHHHHHHHHHHHGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHH
T ss_pred EeCcHHHHHHHHHHHhhcCC------ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 321 f~~~l~~~~~~~~~ 334 (515)
T 2d4e_A 321 FVGKVVERARAIRV 334 (515)
T ss_dssp HHHHHHHHHHHCCB
T ss_pred HHHHHHHHHhhccc
Confidence 99999999998753
No 22
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-58 Score=481.21 Aligned_cols=284 Identities=19% Similarity=0.219 Sum_probs=259.1
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 9 ~~~~i~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~------ 73 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIE--------VRCPAT-GEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERA------ 73 (495)
T ss_dssp SSEEETTEEECCSSCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHH------
T ss_pred cceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHH------
Confidence 3689999999765433323 789998 89999999999999 99999999 999 99999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhccc------------cccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEVL------------ASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~~------------~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++ . +.++|++... ....+..+.|+|
T Consensus 74 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~G 148 (495)
T 3b4w_A 74 -AVIAAA-VKM--LAERKD-LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVG 148 (495)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCc
Confidence 999999 999 999988 777788899999987765 3 3456665321 113466778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+++++|+.||+|++
T Consensus 149 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~ 227 (495)
T 3b4w_A 149 VVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDM 227 (495)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCE
T ss_pred eEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCE
Confidence 999999999999999999999998 99999999999999999999999999999999999999 8889999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 228 I~FTGS~~~G~~i~~~aa~~l~------pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 301 (495)
T 3b4w_A 228 FTFTGSSAVGREVGRRAAEMLK------PCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301 (495)
T ss_dssp EEEESCHHHHHHHHHHHHHTTC------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGH
T ss_pred EEEeCCHHHHHHHHHHhhhcCC------ceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHH
Confidence 9999999999999999998888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 302 d~f~~~l~~~~~~~~ 316 (495)
T 3b4w_A 302 DEIVAAVTNFVTALP 316 (495)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999865
No 23
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.3e-58 Score=484.86 Aligned_cols=286 Identities=21% Similarity=0.235 Sum_probs=260.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 77 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFE--------SIFPAT-GEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG------ 77 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH------
Confidence 456899999999766544433 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc----hhhhhhhcc----------------ccccceeeeccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM----SALTFYLEV----------------LASNLGRGEGLD 198 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~----~~l~~~~~~----------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..++.. +.++|++.. .+. .+..+.|+
T Consensus 78 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~eaev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~ 151 (517)
T 3r31_A 78 -RILKRA-ADI--MRERND-ALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPL 151 (517)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEEC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCc
Confidence 999999 999 999988 7777888999999876522 345554321 122 56778899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|+
T Consensus 152 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd 230 (517)
T 3r31_A 152 GVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVA 230 (517)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEE
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 99999999999999999999999999999999999999 778999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 231 ~I~FTGS~~~G~~i~~~aa~~lk------~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 304 (517)
T 3r31_A 231 KVSLTGSVPTGRKVAAAAAGHLK------HVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKA 304 (517)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGG
T ss_pred EEeccCCHHHHHHHHHHhhcCCC------cEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 305 ~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 305 KARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999998653
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.4e-58 Score=480.45 Aligned_cols=288 Identities=21% Similarity=0.274 Sum_probs=263.5
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
++.++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.++.++|.
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~--------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 69 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFE--------TINPAN-GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS----- 69 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred cccCCeeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 4567899999999875544433 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.+++++.. .....+..+.|+
T Consensus 70 --~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~ 143 (490)
T 2ve5_A 70 --RILRRA-VDI--LRERND-ELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPL 143 (490)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccc
Confidence 999999 999 999988 7777888999999877664 345565431 122346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+
T Consensus 144 GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd 223 (490)
T 2ve5_A 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIE 223 (490)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCC
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHH-hcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQV-GKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~-a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|+||||+++|+.|++++ +++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 224 ~v~fTGS~~~g~~i~~~a~a~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 297 (490)
T 2ve5_A 224 KISFTGGTSTGKKVMASASSSSLK------EVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRS 297 (490)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGG
T ss_pred EEEEeCCcHHHHHHHHhchhcccc------ceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHH
Confidence 999999999999999999 88888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|.+++++++
T Consensus 298 i~d~f~~~l~~~~~~~~ 314 (490)
T 2ve5_A 298 QQARFEAKVLERVQRIR 314 (490)
T ss_dssp GHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999865
No 25
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.8e-58 Score=479.67 Aligned_cols=286 Identities=21% Similarity=0.301 Sum_probs=261.5
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++.++|. +
T Consensus 10 ~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~ 73 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAID--------VTNPAN-GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA-------T 73 (481)
T ss_dssp CSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------H
T ss_pred cceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHH-------H
Confidence 3689999999875543333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+|||
T Consensus 74 ~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 149 (481)
T 3jz4_A 74 ILRNW-FNL--MMEHQD-DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVT 149 (481)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEE
Confidence 99999 999 999988 7777888999999877654 345666531 122345678889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+
T Consensus 150 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~ 229 (481)
T 3jz4_A 150 AAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLS 229 (481)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998889999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 230 fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 303 (481)
T 3jz4_A 230 FTGSTEIGRQLMEQCAKDIK------KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 303 (481)
T ss_dssp EESCHHHHHHHHHHHTTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred EECCHHHHHHHHHHHhhcCC------ceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 304 f~~~l~~~~~~~~~ 317 (481)
T 3jz4_A 304 FAEKLQQAMSKLHI 317 (481)
T ss_dssp HHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998753
No 26
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.1e-58 Score=483.06 Aligned_cols=286 Identities=20% Similarity=0.250 Sum_probs=259.7
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||+| ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 74 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERIS--------ISAPAS-GVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERV------ 74 (505)
T ss_dssp EECCEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH------
Confidence 445799999999876543333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc--------------c----cccceee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV--------------L----ASNLGRG 194 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~--------------~----~~~~~~~ 194 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. . ....+..
T Consensus 75 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (505)
T 3prl_A 75 -DLLYAW-ADL--LEERKE-IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVE 149 (505)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEE
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEE
Confidence 999999 999 999988 7777888999999877654 245555431 0 1224566
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
+.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.|
T Consensus 150 ~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~ 229 (505)
T 3prl_A 150 REPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEH 229 (505)
T ss_dssp EEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTC
T ss_pred EcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhC
Confidence 88899999999999999999999999998 99999999999999999999999999999999999999888999999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|+|++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 230 p~vd~I~FTGS~~~G~~i~~~aa--l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 301 (505)
T 3prl_A 230 PGIDMITFTGGTTTGERISEKAK--MI------PVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFV 301 (505)
T ss_dssp TTCCEEEEESCHHHHHHHHHHCC--SS------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEE
T ss_pred CCCCEEEEeCCHHHHHHHHHHcc--CC------cEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEE
Confidence 99999999999999999999887 66 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 302 ~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 302 QDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp EHHHHHHHHHHHHHHHHHCCB
T ss_pred eHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999998753
No 27
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1e-57 Score=479.02 Aligned_cols=284 Identities=20% Similarity=0.294 Sum_probs=259.5
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
..+++|||+|+.+.+ ..++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 85 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQP--------VYNPAT-GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA------- 85 (495)
T ss_dssp CCCEEETTEEECCCS-CEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------
T ss_pred ccCeEECCEEecCCC-CeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------
Confidence 467999999998754 3333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-------------ccccceeeecccc
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDG 199 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. ++...+..+.|+|
T Consensus 86 ~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~G 161 (495)
T 1wnd_A 86 ECLLKL-ADV--IEENGQ-VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLG 161 (495)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECS
T ss_pred HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCC
Confidence 999999 999 999988 7777888999999877654 345665531 1112356678899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+++++|+.||+|++
T Consensus 162 VV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~ 240 (495)
T 1wnd_A 162 VVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRM 240 (495)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEE
T ss_pred eEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCE
Confidence 999999999999999999999998 99999999999999999999999999 9999999999988889999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 241 I~FTGS~~~G~~i~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 314 (495)
T 1wnd_A 241 VSLTGSIATGEHIISHTASSIK------RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314 (495)
T ss_dssp EEEESCHHHHHHHHHHHGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred EEEECcHHHHHHHHHHHHhcCC------ccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhH
Confidence 9999999999999999999888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 315 d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 315 DTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999875
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1e-57 Score=478.29 Aligned_cols=283 Identities=20% Similarity=0.253 Sum_probs=258.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+..... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. +
T Consensus 13 ~~~~i~g~~~~~~~~~~----------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~ 74 (487)
T 2w8n_A 13 TDSFVGGRWLPAAATFP----------VQDPAS-GAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS-------S 74 (487)
T ss_dssp CSEEETTEEECCSCEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------H
T ss_pred cCeeECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 57899999997763233 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+|||
T Consensus 75 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 150 (487)
T 2w8n_A 75 LLRKW-YNL--MIQNKD-DLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVA 150 (487)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEE
Confidence 99999 999 999988 7777888999999877654 345665531 112235677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEee---CCChhhhhhhhcCCCee
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP---ADGPVFGDTITASPYLA 277 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~---g~g~~~g~~L~~~~~v~ 277 (428)
++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++ |++.+++++|+.||+|+
T Consensus 151 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~ 230 (487)
T 2w8n_A 151 AVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVS 230 (487)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcC
Confidence 9999999999999999999998 9999999999999999999999999999999999999 87778999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 231 ~V~fTGS~~~g~~i~~~aa~~~~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 304 (487)
T 2w8n_A 231 KISFTGSTTTGKILLHHAANSVK------RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304 (487)
T ss_dssp EEEEEECHHHHHHHHHHHHTTTC------EEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred EEEEeCCHHHHHHHHHHHhccCC------cEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence 99999999999999999998888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhc-CC
Q psy1960 358 FCFCSCFLLLFLFS-AS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~-l~ 373 (428)
+|+|+++|++++++ ++
T Consensus 305 ~d~f~~~l~~~~~~~~~ 321 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLR 321 (487)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 99999999999998 65
No 29
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.3e-57 Score=475.87 Aligned_cols=285 Identities=19% Similarity=0.174 Sum_probs=256.5
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
..++|.+|||+|+.++.... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 21 ~~~~~~~i~g~~~~~~~~~~----------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 84 (500)
T 2j6l_A 21 REENEGVYNGSWGGRGEVIT----------TYCPAN-NEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRG----- 84 (500)
T ss_dssp CSEEECEESSSEECCSCEEE----------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-----
T ss_pred CCCCCceECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 36689999999996433333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+
T Consensus 85 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~ 158 (500)
T 2j6l_A 85 --EIVRQI-GDA--LREKIQ-VLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPV 158 (500)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecc
Confidence 999999 999 999988 7777888999999876543 245555431 011234567889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHH----cCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE----AGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~e----AGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+| +.+++++|+.|
T Consensus 159 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~ 237 (500)
T 2j6l_A 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKD 237 (500)
T ss_dssp SEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHC
T ss_pred cEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcC
Confidence 9999999999999999999999998 9999999999999999999988764 6999999999999 77899999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|++++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 238 ~~vd~I~FTGS~~~g~~i~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 311 (500)
T 2j6l_A 238 ERVNLLSFTGSTQVGKQVGLMVQERFG------RSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFI 311 (500)
T ss_dssp TTCSEEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CCcCEEEEECCHHHHHHHHHHhccCCC------ceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEE
Confidence 999999999999999999999999888 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCC
Q psy1960 354 PESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~ 373 (428)
|++++|+|+++|++++++++
T Consensus 312 ~~~i~d~f~~~l~~~~~~~~ 331 (500)
T 2j6l_A 312 HESIHDEVVNRLKKAYAQIR 331 (500)
T ss_dssp ETTTHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999865
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.1e-57 Score=475.99 Aligned_cols=288 Identities=18% Similarity=0.189 Sum_probs=262.3
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
....+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~--------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 75 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRIST--------NINPYD-DSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERS----- 75 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred ccccceeECCEEecCCCCCEEE--------eECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH-----
Confidence 3556899999999765543333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .+++++.. .+...+..+.|+
T Consensus 76 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 149 (508)
T 3r64_A 76 --AIIYRA-AEL--LEEHRE-EIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAK 149 (508)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCEEEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCcccccCCCCceeEEEEecc
Confidence 999999 999 999988 77778899999998776642 45555432 112346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++ ..+++++.++|+|+|++|+++|++.+++++|+.||+|
T Consensus 150 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v 229 (508)
T 3r64_A 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVP 229 (508)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSC
T ss_pred eEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCc
Confidence 9999999999999999999999998 9999999999999999 9999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhc--ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 277 AGINFTGSVPTFNRLWLQVGK--NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~--~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
++|+||||+++|+.|++++++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||
T Consensus 230 d~I~fTGS~~~g~~i~~~aa~~~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 303 (508)
T 3r64_A 230 KLISFTGSTPVGRRVGELAINGGPMK------TVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD 303 (508)
T ss_dssp SEEEEESCHHHHHHHHHHHHSSSSCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEE
T ss_pred cEEEEECCHHHHHHHHHHhhcccCCC------ceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEe
Confidence 999999999999999999988 777 899999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCC
Q psy1960 355 ESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~ 373 (428)
++++|+|+++|++++++++
T Consensus 304 ~~i~d~f~~~l~~~~~~~~ 322 (508)
T 3r64_A 304 AAVHDEFLEKFVEAVKNIP 322 (508)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999875
No 31
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.4e-57 Score=475.49 Aligned_cols=287 Identities=21% Similarity=0.182 Sum_probs=257.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------ 69 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTED--------ILNPYD-QSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRK------ 69 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHH------
T ss_pred cccceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH------
Confidence 346799999999765544333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc--------------ccccceeeeccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV--------------LASNLGRGEGLD 198 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~--------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++.+ .+++++.. .+...+.++.|+
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 144 (485)
T 4dng_A 70 -AVLQKA-RGY--LHENRD-DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPL 144 (485)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEEC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecc
Confidence 999999 999 999988 77778889999998776542 45555431 112346778899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.++++.|+.||++
T Consensus 145 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v 224 (485)
T 4dng_A 145 GVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIP 224 (485)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSC
T ss_pred eEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCC
Confidence 9999999999999999999999998 9999999999999999 9999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 225 ~~v~fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~ 298 (485)
T 4dng_A 225 RLISFTGSTAVGRHIGEIAGRAFK------RMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQD 298 (485)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHTC------EEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHH
T ss_pred CEEEEECCcHHHHHHHHHHhhhcc------chhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 299 i~d~f~~~l~~~~~~~~ 315 (485)
T 4dng_A 299 VYDEFVEKFTARVKQLP 315 (485)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999865
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.9e-57 Score=473.95 Aligned_cols=286 Identities=19% Similarity=0.233 Sum_probs=258.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|.
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------ 68 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYED--------VVNPAT-KEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA------ 68 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH------
Confidence 457899999999765433333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. .+...+.++.|+|
T Consensus 69 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~G 143 (486)
T 1t90_A 69 -RILFNF-QQL--LSQHKE-ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIG 143 (486)
T ss_dssp -HHHHHH-HHH--HHTTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECS
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccC
Confidence 999999 999 999988 77778889999998766542 45555421 1123356778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++| +.+++++|+.||+|++
T Consensus 144 VV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~ 222 (486)
T 1t90_A 144 VVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKA 222 (486)
T ss_dssp EEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEE
T ss_pred EEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCE
Confidence 999999999999999999999998 99999999999999999999999999999999999999 4578999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCce-EEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSR-MYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~sr-v~V~~si 357 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++| ++||++
T Consensus 223 I~fTGS~~~g~~i~~~aa~~~~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~- 295 (486)
T 1t90_A 223 ISFVGSKPVGEYVYKKGSENLK------RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI- 295 (486)
T ss_dssp EEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-
T ss_pred EEEeCCHHHHHHHHHHHhccCC------cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-
Confidence 9999999999999999998888 89999999999999999999999999999999999999999999 999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 296 ~d~f~~~l~~~~~~~~v 312 (486)
T 1t90_A 296 ADEFMAKLQEKVADIKI 312 (486)
T ss_dssp HHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999998764
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.1e-57 Score=472.56 Aligned_cols=283 Identities=20% Similarity=0.236 Sum_probs=257.8
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
.++++|||+|+.+.+... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|.
T Consensus 4 ~~~~~i~g~~~~~~~~~~----------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 65 (475)
T 1euh_A 4 QYKNYVNGEWKLSENEIK----------IYEPAS-GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA------- 65 (475)
T ss_dssp BCCEEETTEEECCSSEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------
T ss_pred ccceeECCEEecCCCceE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------
Confidence 468999999998766333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------cc----ccc-eeee
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LA----SNL-GRGE 195 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~----~~~-~~~~ 195 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+ ... +..+
T Consensus 66 ~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (475)
T 1euh_A 66 AYLHKV-ADI--LMRDKE-KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRR 141 (475)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEE
T ss_pred HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEE
Confidence 999999 999 999988 7777888999999876653 345555431 11 123 6777
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++++|+.||
T Consensus 142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~ 221 (475)
T 1euh_A 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ 221 (475)
T ss_dssp EECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT
T ss_pred eccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC
Confidence 8899999999999999999999999998 999999999999999999999999999999999999998788999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
++++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||
T Consensus 222 ~v~~V~fTGS~~~g~~i~~~aa--~~------~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~ 293 (475)
T 1euh_A 222 AVNFINFTGSTGIGERIGKMAG--MR------PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293 (475)
T ss_dssp TCCEEEEESCHHHHHHHHHHTT--TS------CEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEE
T ss_pred CcCEEEEECchHHHHHHHHhcC--CC------cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEe
Confidence 9999999999999999999887 66 899999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCc
Q psy1960 355 ESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~v 374 (428)
++++|+|+++|+++++++++
T Consensus 294 ~~i~d~f~~~l~~~~~~~~~ 313 (475)
T 1euh_A 294 ESVADELVEKIREKVLALTI 313 (475)
T ss_dssp HHHHHHHHHHHHHHHHTSCB
T ss_pred hhHHHHHHHHHHHHHHhccC
Confidence 99999999999999998764
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-57 Score=475.70 Aligned_cols=287 Identities=19% Similarity=0.216 Sum_probs=260.4
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
..+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.++.++|.
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 70 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIE--------VINPAT-EEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ------- 70 (478)
T ss_dssp CCEEEETTEEEECSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-------
T ss_pred hhhheECCEEecCCCCCeEE--------eECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------
Confidence 46799999999876544333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcc-cc------hhhhhhhcc--------ccccceeeecccceEEEE
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-RM------SALTFYLEV--------LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~-~~------~~l~~~~~~--------~~~~~~~~~~p~GVV~~I 204 (428)
++|+++ +++ |+++.+ ....+...+.|||..++ .. +.+++++.. .....+.++.|+|||++|
T Consensus 71 ~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~P~GVv~~I 146 (478)
T 3ty7_A 71 ALLDKI-VKE--YENRKD-DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGDDLVVKEAIGVSGLI 146 (478)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEEETTEEEEEEECCCEEEE
T ss_pred HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccCCccceEEecCceEEEEE
Confidence 999999 999 999988 77778889999998877 32 245555532 123456778899999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeC
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTG 283 (428)
+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+|||
T Consensus 147 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTG 226 (478)
T 3ty7_A 147 TPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTG 226 (478)
T ss_dssp CCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECS
T ss_pred CCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999 999999999999999999999999999999999999998889999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHH
Q psy1960 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSC 363 (428)
Q Consensus 284 S~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~ 363 (428)
|+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++
T Consensus 227 S~~~G~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~ 300 (478)
T 3ty7_A 227 SGPTGSKIMEKAAKDFK------KVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLA 300 (478)
T ss_dssp CHHHHCC--CSTTTTTC------EEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHH
T ss_pred cHHHHHHHHHHHHhcCC------ceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHH
Confidence 99999999999998888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCc
Q psy1960 364 FLLLFLFSASV 374 (428)
Q Consensus 364 ~L~~~l~~l~v 374 (428)
+|+++++++++
T Consensus 301 ~l~~~~~~~~~ 311 (478)
T 3ty7_A 301 ELKEQFSQVRV 311 (478)
T ss_dssp HHHHHHHTCCB
T ss_pred HHHHHHHhccC
Confidence 99999998753
No 35
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.5e-57 Score=475.00 Aligned_cols=279 Identities=22% Similarity=0.240 Sum_probs=249.8
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
++|||+|+.++. .. ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|
T Consensus 2 ~~I~G~~~~~~~-~~----------~~nP~t-g~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L 62 (486)
T 3pqa_A 2 MFIDGKWINRED-MD----------VINPYS-LEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY-------NIL 62 (486)
T ss_dssp -------CCCCC-EE----------EECTTT-CCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHH-------HHH
T ss_pred eeECCEEecCCC-eE----------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHH
Confidence 589999998754 43 899999 89999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----------ccccceeeecccceEEEEC
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-----------LASNLGRGEGLDGFVAAVS 205 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-----------~~~~~~~~~~p~GVV~~I~ 205 (428)
+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. .+...+..+.|+|||++|+
T Consensus 63 ~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 138 (486)
T 3pqa_A 63 MNI-AKQ--IKEKKE-ELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSDDRLIFTRREPVGIVGAIT 138 (486)
T ss_dssp HHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCTTEEEEEEEEECSEEEEEE
T ss_pred HHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEEEEccccEEEEEC
Confidence 999 999 999988 77778899999998876543 45665531 1223567788899999999
Q ss_pred CCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 206 PFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 206 P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++ |+|+|++|+++|++.++++.|+.||+|++|+
T Consensus 139 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~ 218 (486)
T 3pqa_A 139 PFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMIS 218 (486)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEE
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEE
Confidence 999999999999999998 99999999999999999999999999 9999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 219 fTGS~~~g~~i~~~aa--~~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 290 (486)
T 3pqa_A 219 FTGSSKVGELITKKAG--FK------KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADK 290 (486)
T ss_dssp EESCHHHHHHHHHHCC--SS------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred EECChHHHHHHHHHcC--CC------ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHH
Confidence 9999999999998877 55 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 291 f~~~l~~~~~~~~~ 304 (486)
T 3pqa_A 291 FIEMFVNKAKVLNV 304 (486)
T ss_dssp HHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHhccc
Confidence 99999999998653
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1e-56 Score=472.14 Aligned_cols=283 Identities=19% Similarity=0.197 Sum_probs=256.8
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-ccccCChhhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-PYEKNSVGLLINTEVL 137 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-~W~~~~~~~R~~~~~~ 137 (428)
..++++|||+|+.+..... ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|.++|.
T Consensus 17 ~~~~~~i~g~~~~~~~~~~----------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~----- 80 (501)
T 1uxt_A 17 PVYPSYLAGEWGGSGQEIE----------VKSPID-LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL----- 80 (501)
T ss_dssp EEECEECSSSEECCSCEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHH-----
T ss_pred cccceeECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHH-----
Confidence 4678999999998753233 789999 89999999999999 99999999 999 99999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc--------------c---cccceee
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV--------------L---ASNLGRG 194 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~--------------~---~~~~~~~ 194 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. . ....+.+
T Consensus 81 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~ 154 (501)
T 1uxt_A 81 --AVLRKA-ADI--IERNLD-VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVR 154 (501)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEE
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEE
Confidence 999999 999 999988 7777888999999876654 245555431 1 1134567
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +++++|+.|
T Consensus 155 ~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~ 233 (501)
T 1uxt_A 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVAD 233 (501)
T ss_dssp EEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTC
T ss_pred EeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhC
Confidence 78899999999999999999999999998 9999999999999999999999999999999999999987 899999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|+|++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 234 ~~vd~I~FTGS~~~G~~i~~~aa--l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 305 (501)
T 1uxt_A 234 DRVAAVSFTGSTEVGERVVKVGG--VK------QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 305 (501)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHC--SS------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CCcCEEEEeCcHHHHHHHHHhcC--CC------eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEe
Confidence 99999999999999999999887 66 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 306 ~~~i~d~f~~~l~~~~~~~~~ 326 (501)
T 1uxt_A 306 ERPVYGKLVEEVAKRLSSLRV 326 (501)
T ss_dssp EHHHHHHHHHHHHHHHHTCCB
T ss_pred ccchHHHHHHHHHHHHHhccC
Confidence 999999999999999998764
No 37
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.5e-56 Score=466.30 Aligned_cols=283 Identities=23% Similarity=0.244 Sum_probs=256.0
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
+++|||+|+.+.+... + ++||.+ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++
T Consensus 7 ~~~I~G~~~~~~~~~~-~--------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~ 69 (490)
T 3ju8_A 7 THYIAGQWLAGQGETL-E--------SLDPVG-QGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI-------EL 69 (490)
T ss_dssp CEEETTEEECCCSCEE-E--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HH
T ss_pred CceECCEEecCCCCeE-E--------EECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HH
Confidence 7999999998754322 2 679998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. ........+.|+|||++
T Consensus 70 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 145 (490)
T 3ju8_A 70 LERF-AAT--LKSRAD-ELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAV 145 (490)
T ss_dssp HHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEE
T ss_pred HHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEE
Confidence 9999 999 999988 77778889999998776542 44554321 11223455788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+++++|+.||+|++|+||
T Consensus 146 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fT 224 (490)
T 3ju8_A 146 FGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFT 224 (490)
T ss_dssp ECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEE
T ss_pred ECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999 57889999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcE-EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc-hHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRL-IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL-FCF 360 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~-~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si-~d~ 360 (428)
||+++|+.|+++++++++ |+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+
T Consensus 225 GS~~~g~~i~~~aa~~~~------~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 298 (490)
T 3ju8_A 225 GSSRTGNLLHSQFGGQPQ------KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDA 298 (490)
T ss_dssp SCHHHHHHHHHHTTTCTT------SEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHH
T ss_pred CcHHHHHHHHHHhhccCC------CcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHH
Confidence 999999999999999888 77 7999999999999999999999999999999999999999999999997 999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 299 f~~~l~~~~~~~~~ 312 (490)
T 3ju8_A 299 LLARLVAVSATLRV 312 (490)
T ss_dssp HHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998754
No 38
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7.2e-56 Score=463.75 Aligned_cols=265 Identities=17% Similarity=0.181 Sum_probs=246.6
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||+| ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 8 ~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 75 (484)
T 3ros_A 8 SVNPYT-NEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRA-------EILHDI-ANA--LKEHED-ELAKMMTLE 75 (484)
T ss_dssp EEETTT-TEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred eeCCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccc------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRM------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
.|||..+++. +.++|++.. .....+..+.|+|||++|+|||||+....++++|||+ ||+||
T Consensus 76 ~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VV 155 (484)
T 3ros_A 76 MGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPIL 155 (484)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEE
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9999887654 245555431 1234567788999999999999999999999999999 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+++|+.|+++++++++ |+
T Consensus 156 lKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk------~v 228 (484)
T 3ros_A 156 LKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLK------KS 228 (484)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTC------EE
T ss_pred EECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCC------ce
Confidence 9999999999999999999999999999999998888888 9999999999999999999999999999888 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 229 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 293 (484)
T 3ros_A 229 TMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLK 293 (484)
T ss_dssp EEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred EeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999865
No 39
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.3e-55 Score=464.77 Aligned_cols=289 Identities=17% Similarity=0.103 Sum_probs=256.3
Q ss_pred HHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEE-EEeCCCHhH-HHHHHHHh-ccCccccCChhh
Q psy1960 54 KRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIA-KFYYATPVL-KSALDIVS-SLCPYEKNSVGL 130 (428)
Q Consensus 54 ~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia-~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~ 130 (428)
+.+.+.....++||||+|+.+.+ ++||+| +++++ +++.++.++ ++|+++|+ ||+.|+.++.++
T Consensus 21 ~~~~~~~~~~~~~I~G~~~~~~~-------------v~nP~t-g~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~ 86 (528)
T 3v4c_A 21 QSMMIFTPKGKHLVAGEWLDGAG-------------TFASAP-AHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKE 86 (528)
T ss_dssp --CCSCCCCCCEEETTEEECCSS-------------EEECCC-SSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHhhhcccccCceECCEEecCCC-------------ccCCCC-CCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 33444456678999999998754 379998 89998 999999999 99999999 999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------------
Q psy1960 131 LINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------------ 186 (428)
Q Consensus 131 R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------------ 186 (428)
|. ++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++..
T Consensus 87 R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~ 155 (528)
T 3v4c_A 87 RA-------AFLRAI-ADE--IEARAE-AITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPER 155 (528)
T ss_dssp HH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTC
T ss_pred HH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccc
Confidence 99 999999 999 999988 7777888999999876554 244554321
Q ss_pred ---ccccceeeecccceEEEECCCchhhhhhH--hhhhhhcC-CCEEEEeCCccchHHHHHHHHHH----HHcCCCCccE
Q psy1960 187 ---LASNLGRGEGLDGFVAAVSPFNFTAIGGN--LAYTPALM-GSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVV 256 (428)
Q Consensus 187 ---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~--~~iapALa-GN~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv 256 (428)
.....+..+.|+|||++|+|||||+...+ ++++|||+ ||+||+|||+.+|+++..+++++ .++|+|+|++
T Consensus 156 ~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv 235 (528)
T 3v4c_A 156 QPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVF 235 (528)
T ss_dssp SSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeE
Confidence 11224567888999999999999988754 89999999 99999999999999999999875 4689999999
Q ss_pred EEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhccc--CcccCCCcEEEecCCCceeEEcCCC---CHHHHHH
Q psy1960 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGKNFHFIHASA---NVESVVN 331 (428)
Q Consensus 257 ~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~--~~~~~~~~~~lElGGkn~~iV~~dA---Dld~Aa~ 331 (428)
|+|+|++.+++++|+.||+|++|+||||+++|+.|++++++++ + |+++|+|||||+||++|| |+|.|++
T Consensus 236 ~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~------pv~lElGGk~p~iV~~dAd~~dl~~Aa~ 309 (528)
T 3v4c_A 236 SLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPI------PFFGELGSVNPMFLLPEALKARAETLGQ 309 (528)
T ss_dssp EEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCC------CEEEECCCCCCEEECHHHHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCC------ceEEecCCCCeEEECCCCChhhHHHHHH
Confidence 9999988899999999999999999999999999999999988 5 899999999999999999 8999999
Q ss_pred HHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHHHHhcCC
Q psy1960 332 GTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 332 ~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~~l~~l~ 373 (428)
.+++++|.|+||.|++++|+|||++ ++|+|+++|++++++++
T Consensus 310 ~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 352 (528)
T 3v4c_A 310 GWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVA 352 (528)
T ss_dssp HHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999998 99999999999998875
No 40
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=6.3e-54 Score=447.12 Aligned_cols=265 Identities=20% Similarity=0.229 Sum_probs=245.0
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 11 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 78 (462)
T 3etf_A 11 SVNPAT-GQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRA-------QTLRDI-GQA--LRAHAE-EMAQCITRE 78 (462)
T ss_dssp EECTTT-CCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred eECCCC-CCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
.|||..+++.+ .++|++.. .+...+.++.|+|||++|+|||||+....+++++||+ ||+||
T Consensus 79 ~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vv 158 (462)
T 3etf_A 79 MGKPIKQARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYL 158 (462)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEE
Confidence 99998776542 45555431 1223566788899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.||++++|+||||+++|+.|++.++++++ |+
T Consensus 159 lKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~------~v 231 (462)
T 3etf_A 159 LKHAPNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALK------KC 231 (462)
T ss_dssp EECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTC------CE
T ss_pred EECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCC------ce
Confidence 9999999999999999999999999999999995 5678999999999999999999999999999999888 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 232 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 296 (462)
T 3etf_A 232 VLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALK 296 (462)
T ss_dssp EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999865
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.4e-54 Score=456.42 Aligned_cols=282 Identities=17% Similarity=0.171 Sum_probs=246.7
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-c-cCccccCChhhhhhhhhhH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-S-LCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A-~~~W~~~~~~~R~~~~~~~ 138 (428)
.++++|||+|+.+.+. .++ ++||++ ++++++++.++ ++ ++|+++|+ | |+.|+.++.++|.
T Consensus 7 ~~~~~i~G~~~~~~~~-~~~--------v~nP~t-g~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~------ 69 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGA-GIT--------LTDPVT-GVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRA------ 69 (534)
T ss_dssp ECCEEETTEEECCSSS-CEE--------EECTTT-CCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred hhhhEECCEEecCCCC-eEE--------EECCCC-CCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHH------
Confidence 4789999999976443 222 789999 89999999987 78 99999999 9 5999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------cc-------c--cc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LA-------S--NL 191 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~-------~--~~ 191 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. ++ . ..
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 144 (534)
T 2y53_A 70 -ARLADI-VKL--LQAKRG-DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSA 144 (534)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEE
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccc
Confidence 999999 999 999988 77778889999998766542 35555431 00 0 12
Q ss_pred eeeeccc-ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhhh
Q psy1960 192 GRGEGLD-GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGD 268 (428)
Q Consensus 192 ~~~~~p~-GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g~ 268 (428)
...+.|. |||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++
T Consensus 145 ~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~ 224 (534)
T 2y53_A 145 QHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD 224 (534)
T ss_dssp EEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGG
T ss_pred eEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHh
Confidence 4556675 9999999999999999999999998 999999999999999999999999999 799999999997655444
Q ss_pred hhhcCCCeeEEEeeCChhhHHHHHHHHh--cccCcccCCCcEEEecCCCceeEEcCCC-----CHHHHHHHHHHHHhhcC
Q psy1960 269 TITASPYLAGINFTGSVPTFNRLWLQVG--KNINVYKNFPRLIGECGGKNFHFIHASA-----NVESVVNGTIRSAFEYC 341 (428)
Q Consensus 269 ~L~~~~~v~~I~fTGS~~~g~~i~~~~a--~~~~~~~~~~~~~lElGGkn~~iV~~dA-----Dld~Aa~~iv~saf~~~ 341 (428)
.| +++++|+||||+++|+.|++.++ ++++ |+++|+|||||+||++|| |+|.|++.+++++|.|+
T Consensus 225 ~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k------~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~ 295 (534)
T 2y53_A 225 QI---RSFDVVSFTGSADTAATLRAHPAFVQRGA------RLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKS 295 (534)
T ss_dssp GC---CTTCEEEEESCHHHHHHHHTSHHHHTTCC------EEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGG
T ss_pred cc---cccCEEEEECCHHHHHHHHHhhhhhcCCC------cEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCC
Confidence 43 57899999999999999998775 7777 899999999999999999 99999999999999999
Q ss_pred CCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 342 GQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 342 GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
||.|++++|+|||++++|+|+++|+++++++++
T Consensus 296 GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 328 (534)
T 2y53_A 296 GQKCTAIRRAFVPEAALEPVLEALKAKLAKITV 328 (534)
T ss_dssp GCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCB
T ss_pred CCcccCCCEEEEeccHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999764
No 42
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=7.1e-54 Score=451.66 Aligned_cols=266 Identities=16% Similarity=0.130 Sum_probs=240.7
Q ss_pred cccCCCCCeeE-EEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 90 QPMPHNHKKKI-AKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 90 ~~~P~~~g~~i-a~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
++||++ ++++ ++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...
T Consensus 11 ~~nP~t-g~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~ 78 (510)
T 1ez0_A 11 ATNAFT-GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRA-------SLLRTI-ASE--LEARSD-DIIARAHL 78 (510)
T ss_dssp EECTTT-SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHH
T ss_pred eECCCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHH
Confidence 789998 8999 7999999999 99999999 99999999999999 999999 999 999988 77778889
Q ss_pred hcCCCCCcccch------hhhhhhcc-------------------c-c-ccceeeecccceEEEECCCchhhhhh--Hhh
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV-------------------L-A-SNLGRGEGLDGFVAAVSPFNFTAIGG--NLA 217 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~-------------------~-~-~~~~~~~~p~GVV~~I~P~NfP~~~~--~~~ 217 (428)
+.|||..+++.| .++|++.. . . ...+.++.|+|||++|+|||||+... .++
T Consensus 79 e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 158 (510)
T 1ez0_A 79 ETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGD 158 (510)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHH
Confidence 999998655432 34444320 0 1 12356778899999999999998874 499
Q ss_pred hhhhcC-CCEEEEeCCccchHHHHHHHHHH----HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHH
Q psy1960 218 YTPALM-GSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLW 292 (428)
Q Consensus 218 iapALa-GN~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~ 292 (428)
+++||+ ||+||+|||+.+|+++..+++++ .++|+|+|++|+++|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 159 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (510)
T 1ez0_A 159 TASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALF 238 (510)
T ss_dssp HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHH
Confidence 999998 99999999999999999999998 5679999999999998888999999999999999999999999999
Q ss_pred HHHhccc--CcccCCCcEEEecCCCceeEEcCCCCHH--HHHHHHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHH
Q psy1960 293 LQVGKNI--NVYKNFPRLIGECGGKNFHFIHASANVE--SVVNGTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLL 367 (428)
Q Consensus 293 ~~~a~~~--~~~~~~~~~~lElGGkn~~iV~~dADld--~Aa~~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~ 367 (428)
+++++++ + |+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|++
T Consensus 239 ~~aa~~l~~~------pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~ 312 (510)
T 1ez0_A 239 NLAHERPEPI------PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQS 312 (510)
T ss_dssp HHHHHSSSCC------CEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHH
T ss_pred HHhhccCCCc------cEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHH
Confidence 9999886 6 899999999999999999999 99999999999999999999999999999 99999999999
Q ss_pred HHhcCC
Q psy1960 368 FLFSAS 373 (428)
Q Consensus 368 ~l~~l~ 373 (428)
++++++
T Consensus 313 ~~~~~~ 318 (510)
T 1ez0_A 313 LIRQQS 318 (510)
T ss_dssp HHHHCC
T ss_pred HHHhcC
Confidence 998875
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=5e-53 Score=439.72 Aligned_cols=263 Identities=20% Similarity=0.152 Sum_probs=230.1
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
..||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 10 ~~~~~~-~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 77 (457)
T 3lns_A 10 HSSGHI-DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRK-------QSLERL-KEA--VINNKE-ALYSALAED 77 (457)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHH-------HHHHHH-HHH--HHTTHH-HHHHHHHHH
T ss_pred ccCCCC-CCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 678998 89999999999999 99999999 99999999999999 999999 999 999988 777888999
Q ss_pred cCCCCCcccc-------hhhhhhhcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRM-------SALTFYLEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~-------~~l~~~~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
.|||..+++. +.+++++.. .....+..+.|+|||++|+|||||+....+++++||+
T Consensus 78 ~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaa 157 (457)
T 3lns_A 78 LGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIG 157 (457)
T ss_dssp HCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHc
Confidence 9999887653 234444320 1233467788899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+++++.++ +|+|++|+++| +.+++++|+. ++|++|+||||+++|+.|+++++++++
T Consensus 158 GN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~--- 231 (457)
T 3lns_A 158 GNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLT--- 231 (457)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTC---
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccC---
Confidence 99999999999999999999999999 99999999999 6678999998 689999999999999999999999888
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 232 ---pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 298 (457)
T 3lns_A 232 ---PVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL 298 (457)
T ss_dssp ---CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC
T ss_pred ---ceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999998864
No 44
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.2e-53 Score=443.03 Aligned_cols=263 Identities=19% Similarity=0.135 Sum_probs=236.9
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||+| |+++++++.+++++ ++|+++|+ ||+.|+++|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 10 v~nP~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 77 (474)
T 4h7n_A 10 VRNPRT-GKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRI-------TTLQQW-KQA--ILSRRE-QLTEALVND 77 (474)
T ss_dssp EECTTT-CSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHH-------HHHHHH-HHH--HHTTHH-HHHHHHHHH
T ss_pred eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCccc-----chhhhhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 168 GQQPFGGGR-----MSALTFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 168 ~gkp~~~~~-----~~~l~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
+||+..... .+.++++... +.......+.|+|||++|+|||||+....++++|||+ ||+|
T Consensus 78 ~Gk~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~V 157 (474)
T 4h7n_A 78 TGRLSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAV 157 (474)
T ss_dssp HSCSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEE
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCce
Confidence 999743211 1234444320 1122334567899999999999999999999999999 9999
Q ss_pred EEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 228 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+++|+.|++.++++++ |
T Consensus 158 VlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~------~ 228 (474)
T 4h7n_A 158 VVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFI------P 228 (474)
T ss_dssp EEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTC------C
T ss_pred eecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccc------c
Confidence 9999999999999999999999999999999999 55778889876 8999999999999999999999988 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 229 v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 294 (474)
T 4h7n_A 229 AYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQ 294 (474)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCC
T ss_pred ccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999865
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.4e-50 Score=451.83 Aligned_cols=287 Identities=22% Similarity=0.245 Sum_probs=254.4
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
..|++.+||. ...+++++.++++.+... | . | ++.++.++
T Consensus 513 r~n~~~~d~~-~~~~~~~~~~~~~~~~~~-----------~-------~-------------p---------v~~a~~~d 551 (1001)
T 3haz_A 513 RRNSRGVEFG-ARTALDQLLTDVKAETGD-----------L-------K-------------P---------IADATPDQ 551 (1001)
T ss_dssp CCCCCCCCTT-SHHHHHHHHHHHHHCCCC-----------C-------C-------------C---------CCCCCHHH
T ss_pred cCCCCCCCCC-CHHHHHHHHHHHHHHhhc-----------C-------C-------------C---------cccCCHHH
Confidence 4699999997 467788898888887431 1 1 2 56778999
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhh
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTF 182 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~ 182 (428)
++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|
T Consensus 552 v~~Av~aA~~A~~~W~~~~~~eR~-------~iL~~~-ad~--l~~~~~-eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 552 AHAAVAAARAGFAGWSRTPAGIRA-------AALEQA-AHL--LESRSA-HFIALLQREGGKTLDDALSELREAADFCRY 620 (1001)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 999988 7777888999999877654 35666
Q ss_pred hhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH
Q psy1960 183 YLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 183 ~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
|+.. .+......+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 6541 1122345677899999999999999999999999998 999999999999999999999999
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+|+|++.+ ++.|+.||+|++|+||||+++|+.|.+.++++.. +.+|+++|+|||||+||++|||+|
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~---~l~pv~lElGGknp~IV~~dADld 776 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDG---PIVPLIAETGGINAMIADATALPE 776 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS---CCCCEEEECCCCEEEEECTTSCHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccC---CCceEEeecCCcceEEEcCCCCHH
Confidence 999999999999998887 9999999999999999999999999999887511 123899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|++.+++|+|.|+||.|+|++|+|||++++|+|+++|++++++++
T Consensus 777 ~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~ 822 (1001)
T 3haz_A 777 QVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELK 822 (1001)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999865
No 46
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=5.9e-50 Score=417.64 Aligned_cols=248 Identities=13% Similarity=0.077 Sum_probs=219.5
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-----
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM----- 177 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~----- 177 (428)
..+.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||..+++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~ 82 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRI-------QQLEAL-QRL--IQEQEQ-ELVGALAADLHKNEWNAYYEEVVY 82 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHH
Confidence 345668 99999999 99999999999999 999999 999 999988 7777888999999876642
Q ss_pred --hhhhhhh--------cc--------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH
Q psy1960 178 --SALTFYL--------EV--------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS 238 (428)
Q Consensus 178 --~~l~~~~--------~~--------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~ 238 (428)
+.++++. +. .....+..+.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t 162 (469)
T 3sza_A 83 VLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENM 162 (469)
T ss_dssp HHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHH
T ss_pred HHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 1222221 11 0123466788999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 239 a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+..+++++.++ +|+|++|+++|++. .+..|+.| ++++|+||||+++|+.|+++++++++ |+++|+|||||+
T Consensus 163 ~~~l~~l~~~a-lP~gvv~vv~g~~~-~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lk------pv~lELGGk~p~ 233 (469)
T 3sza_A 163 ASLLATIIPQY-LDKDLYPVINGGVP-ETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLT------PVTLELGGKSPC 233 (469)
T ss_dssp HHHHHHHHHHH-SCTTTSCBCCCSHH-HHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTC------CEEEECCCCCEE
T ss_pred HHHHHHHHHHh-CCcceEEEEECCHH-HHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccC------ceEEecCCCCce
Confidence 99999999998 99999999999554 46677778 89999999999999999999999888 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcC
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSA 372 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l 372 (428)
||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++
T Consensus 234 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 287 (469)
T 3sza_A 234 YVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF 287 (469)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999873
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-49 Score=409.09 Aligned_cols=263 Identities=13% Similarity=0.037 Sum_probs=204.8
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ ||+.|+.++..+|. ++|+++ +++ |+++.+ ....+...+
T Consensus 11 ~~~P~t-g~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 78 (463)
T 2h5g_A 11 VDLGTE-NLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRA-------EIIHHL-ADL--LTDQRD-EILLANKKD 78 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred CcCCCC-CCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 999887 665666666
Q ss_pred c-------CCCCC----cccc------hhhhhhhcc---------------ccccceeeecccceEEEECCCchhhhhhH
Q psy1960 168 G-------QQPFG----GGRM------SALTFYLEV---------------LASNLGRGEGLDGFVAAVSPFNFTAIGGN 215 (428)
Q Consensus 168 ~-------gkp~~----~~~~------~~l~~~~~~---------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~ 215 (428)
. |||+. ++.. +.++|++.. .+...+..+.|+|||++|+||| |....
T Consensus 79 ~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p- 156 (463)
T 2h5g_A 79 LEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP- 156 (463)
T ss_dssp HHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-
T ss_pred hhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-
Confidence 6 68875 2222 345666521 1112356778899999999776 65554
Q ss_pred hhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHH
Q psy1960 216 LAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNR 290 (428)
Q Consensus 216 ~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~ 290 (428)
++++|||+ ||+||+|||+.+|+++..++++++++ | |+|++|+|+| +.++++.|+.||+|++|+||||+++|+.
T Consensus 157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 234 (463)
T 2h5g_A 157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRD 234 (463)
T ss_dssp HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 78999998 99999999999999999999999999 9 9999999999 6778999999999999999999999999
Q ss_pred HHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH-HHHHHHHHHH
Q psy1960 291 LWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC-FCSCFLLLFL 369 (428)
Q Consensus 291 i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d-~f~~~L~~~l 369 (428)
|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|+|||++++| .+.+++.+.+
T Consensus 235 i~~~aa--l~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 235 IQKAAK--GI------PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp HHHHCS--SS------CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred HHHhcC--CC------CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 999887 56 8999999999999999999999999999999999 999999999999999998 5777887777
Q ss_pred hcCCcceE
Q psy1960 370 FSASVPVF 377 (428)
Q Consensus 370 ~~l~v~~~ 377 (428)
.+-+..++
T Consensus 306 ~~~Ga~v~ 313 (463)
T 2h5g_A 306 RVEQVKIH 313 (463)
T ss_dssp HHTTCEEE
T ss_pred HhCCCEEE
Confidence 66555544
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1e-47 Score=399.28 Aligned_cols=245 Identities=11% Similarity=0.073 Sum_probs=214.5
Q ss_pred EeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc---
Q psy1960 103 FYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM--- 177 (428)
Q Consensus 103 v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~--- 177 (428)
++.++.++ ++++++|+ ||+.|+.++.++|. ++|+++ +++ ++++.+ ....+...++|++..+++.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~il~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~e~~~~~~ 69 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVD-------KIFRAA-SLA--ANQARI-PLAQQAVEESGMGIVEDKVIKN 69 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHH
Confidence 35678899 99999999 99999999999999 999999 999 999888 7777888999999887654
Q ss_pred ----hhh-hhhhcc---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHH
Q psy1960 178 ----SAL-TFYLEV---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242 (428)
Q Consensus 178 ----~~l-~~~~~~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l 242 (428)
+.+ +++... .....+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+
T Consensus 70 ~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~ 149 (452)
T 3my7_A 70 HFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDA 149 (452)
T ss_dssp HHHHHHHHHHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHH
Confidence 122 344321 1223467788899999999999999999999999998 9999999999999999998
Q ss_pred HHHHH----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 243 YKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 243 ~~ll~----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+++++ ++|+|+|++|+++|++.++++.|+.||+|++|+||||+++++ +++++++ |+++|+|||||+
T Consensus 150 ~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~k------p~~~e~gG~~p~ 219 (452)
T 3my7_A 150 AKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGK------PAIGVGAGNVPV 219 (452)
T ss_dssp HHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSS------CEEECC--CEEE
T ss_pred HHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCC------CEEecCCCCCeE
Confidence 88876 789999999999998889999999999999999999998654 4555666 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHH
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLF 368 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~ 368 (428)
||++|||+|+|++.+++|+|.|+||.|++.+|+|||+++||+|+++|+++
T Consensus 220 iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 220 VIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp EECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998764
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=5.3e-47 Score=395.04 Aligned_cols=245 Identities=13% Similarity=0.016 Sum_probs=214.1
Q ss_pred EeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch--
Q psy1960 103 FYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS-- 178 (428)
Q Consensus 103 v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~-- 178 (428)
++.++.++ ++++++|+ ||+.|+.++.++|. ++|+++ +++ ++++.+ ....+...++|++..+++..
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~e~~~~~~ 74 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQKELAAMSQQQID-------TIVKAI-ADA--GYGARE-KLAKMAHEETGFGIWQDKVIKN 74 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCSCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCcCHHHHHHHHH
Confidence 34567788 99999999 99999999999999 999999 999 999888 77777888999998765431
Q ss_pred -----hh-hhhhc---------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHH
Q psy1960 179 -----AL-TFYLE---------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242 (428)
Q Consensus 179 -----~l-~~~~~---------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l 242 (428)
.+ +|+.. ..+...+.++.|+|||++|+|||||+.+.++++++||+ ||+||+|||+.+|+++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l 154 (464)
T 3k9d_A 75 VFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILET 154 (464)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHH
Confidence 11 12211 11234566788999999999999999999999999998 9999999999999999986
Q ss_pred HH----HHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecC-CCce
Q psy1960 243 YK----IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG-GKNF 317 (428)
Q Consensus 243 ~~----ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElG-Gkn~ 317 (428)
++ ++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+++ .++++++++ |+ +|+| ||||
T Consensus 155 ~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~k------pv-lelG~G~~p 223 (464)
T 3k9d_A 155 VRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGT------PA-IGVGPGNGP 223 (464)
T ss_dssp HHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSS------CE-EEBCCCCCE
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCC------cE-EeeCCCCCe
Confidence 55 5688999999999999988899999999999999999999984 455666666 78 7888 9999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHH
Q psy1960 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFL 369 (428)
Q Consensus 318 ~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l 369 (428)
+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++.
T Consensus 224 ~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~ 275 (464)
T 3k9d_A 224 AFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQG 275 (464)
T ss_dssp EEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999875
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-46 Score=389.55 Aligned_cols=244 Identities=15% Similarity=0.088 Sum_probs=204.8
Q ss_pred HhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Ccccc----
Q psy1960 108 PVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGRM---- 177 (428)
Q Consensus 108 ~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~~---- 177 (428)
.++ ++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+.|++. .+++.
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~gk~~~~g~~ea~~~~~~ 93 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKN-------AALEAV-ARA--IERDAG-ALKAANARDVARAKDKGLDAAFVDRLT 93 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHH-------HHHHHH-HHH--HHHSHH-HHHHHHHHHHCC------CCSHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHHhhhhhccchHHHHHHhh
Confidence 467 99999999 99999999999999 999999 999 999887 66666677777763 34331
Q ss_pred ----------hhhhhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCC
Q psy1960 178 ----------SALTFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPS 232 (428)
Q Consensus 178 ----------~~l~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs 232 (428)
+.+++++.. .+...+.++.|+|||++|+||| | ....++++|||+ ||+||+|||
T Consensus 94 ~~~~~v~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps 171 (444)
T 4ghk_A 94 LSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGG 171 (444)
T ss_dssp CCTTHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECC
T ss_pred ccHHHHHHHHHHHHHHHhhccccCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECC
Confidence 234554321 1223466788999999999999 8 578899999998 999999999
Q ss_pred ccchHHHHHHHHHH----HHcCCCCccEEEeeCCCh-hhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 233 DTALLSNYTIYKIM----IEAGVPPGVVNFVPADGP-VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 233 ~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~-~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
+.+|+++..+++++ .++|+|+|++|+++|++. ++++.|..||+|++|+||||+.+|+.+++++ ++ |
T Consensus 172 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~------p 242 (444)
T 4ghk_A 172 SEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RV------P 242 (444)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CS------C
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CC------C
Confidence 99999999999997 799999999999998665 5788899999999999999999999998765 44 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||++++|+|+++|+++++++++
T Consensus 243 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 308 (444)
T 4ghk_A 243 MIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGV 308 (444)
T ss_dssp BCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999 9999999999999999999999999999987
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.9e-46 Score=385.65 Aligned_cols=246 Identities=14% Similarity=0.066 Sum_probs=214.0
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Cccc------
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGR------ 176 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~------ 176 (428)
++ ++++++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...+.|++. .++.
T Consensus 14 ~~~~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~gk~~~~g~~ea~~~~~~~ 82 (427)
T 1o20_A 14 DELLEKAKKVREAWDVLRNATTREKN-------KAIKKI-AEK--LDERRK-EILEANRIDVEKARERGVKESLVDRLAL 82 (427)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHTTCCHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhhccccccccHHHHHHHhc
Confidence 35 99999999 99999999999999 999999 999 999887 66666666667653 3322
Q ss_pred --------chhhhhhhcc----c----------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCc
Q psy1960 177 --------MSALTFYLEV----L----------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSD 233 (428)
Q Consensus 177 --------~~~l~~~~~~----~----------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~ 233 (428)
.+.+++++.. + +...+.++.|+|||++|+||| | ....++++|||+ ||+||+|||+
T Consensus 83 ~~~ev~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~ 160 (427)
T 1o20_A 83 NDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGS 160 (427)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCG
T ss_pred CHHHHHHHHHHHHHHHhcccccCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCH
Confidence 1345565431 0 112356778899999999987 4 578899999998 9999999999
Q ss_pred cchHHHHHHHHHHH----HcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 234 TALLSNYTIYKIMI----EAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 234 ~apl~a~~l~~ll~----eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
.+|+++..+++++. ++|+|+|++|+|+|+ ++++++.|..||+|++|+||||+++|+.|++++ .+ |+
T Consensus 161 ~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~------~v 231 (427)
T 1o20_A 161 DALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TV------PV 231 (427)
T ss_dssp GGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SS------CB
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CC------CE
Confidence 99999999999998 679999999999984 567889999999999999999999999998876 34 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceE
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVF 377 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~ 377 (428)
++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||++++|+|+++|+++++++++.+.
T Consensus 232 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~ 299 (427)
T 1o20_A 232 LETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR 299 (427)
T ss_dssp CCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCeee
Confidence 9999999999999999999999999999999999 9999999999999999999999999999987543
No 52
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.9e-46 Score=388.58 Aligned_cols=239 Identities=12% Similarity=0.088 Sum_probs=208.0
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Cccc--------c
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGR--------M 177 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~--------~ 177 (428)
++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||. .++. .
T Consensus 17 ~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~ 85 (468)
T 1vlu_A 17 QQIAKNARKAGNILKTISNEGRS-------DILYKI-HDA--LKANAH-AIEEANKIDLAVAKETGLADSLLKRLDLFKG 85 (468)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHSSCCHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCcccccccchHHHHHHhhhhH
Confidence 89999999 99999999999999 999999 999 999988 77777788888886 5542 1
Q ss_pred hhhhhhhc-------------c--c------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccc
Q psy1960 178 SALTFYLE-------------V--L------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 235 (428)
Q Consensus 178 ~~l~~~~~-------------~--~------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~a 235 (428)
+.+++++. . . +...+..+.|+|||++|+||| | ....++++|||+ ||+||+|||+.+
T Consensus 86 ~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~t 163 (468)
T 1vlu_A 86 DKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKES 163 (468)
T ss_dssp THHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCcc
Confidence 22333321 0 0 112356778899999999999 9 889999999999 999999999999
Q ss_pred hHHHHHHHHHHH----H----cCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 236 LLSNYTIYKIMI----E----AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 236 pl~a~~l~~ll~----e----AGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+++..++++++ + +|+|+|++|+|+ +++++++.|..||+|++|+||||+++|+.|++++ ++ |
T Consensus 164 p~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~k------p 233 (468)
T 1vlu_A 164 VNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KI------P 233 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CS------C
T ss_pred HHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CC------C
Confidence 999999999995 8 999999999999 7778899999999999999999999999998876 44 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++
T Consensus 234 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v 298 (468)
T 1vlu_A 234 VLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGV 298 (468)
T ss_dssp BTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCC
T ss_pred EEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999 99999999999999 9999999999999886
No 53
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=50.79 E-value=9.4 Score=32.32 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=46.2
Q ss_pred cCCCEEEEeCCccchHHHHHHHHHHHH-cCCCCccEEEee-CCChhhhhhhhcCCCeeEEEeeCC-------hhhHHHHH
Q psy1960 222 LMGSSVLWKPSDTALLSNYTIYKIMIE-AGVPPGVVNFVP-ADGPVFGDTITASPYLAGINFTGS-------VPTFNRLW 292 (428)
Q Consensus 222 LaGN~VVlKPs~~apl~a~~l~~ll~e-AGlP~gvv~vv~-g~g~~~g~~L~~~~~v~~I~fTGS-------~~~g~~i~ 292 (428)
|.|..++- |.-++ +.+++ .|++-..++-++ +.++.+++.+.+. +|+.|+||-+ ...+..|.
T Consensus 29 l~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~g-eIdlVInt~~pl~~~~h~~D~~~Ir 98 (134)
T 2xw6_A 29 LARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAEG-RILAVIFFRDPLTAQPHEPDVQALL 98 (134)
T ss_dssp HTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHTT-CEEEEEEECCTTTCCTTSCCSHHHH
T ss_pred hCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHCC-CccEEEEccCcccCCCccchHHHHH
Confidence 34666653 33344 44556 899988877776 5455677777654 7999999977 33567788
Q ss_pred HHHhcccC
Q psy1960 293 LQVGKNIN 300 (428)
Q Consensus 293 ~~~a~~~~ 300 (428)
+.+..+-.
T Consensus 99 R~A~~~~I 106 (134)
T 2xw6_A 99 RVCDVHGV 106 (134)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 87776544
No 54
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=46.03 E-value=30 Score=31.67 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=44.5
Q ss_pred cCceEEEeCCch--HHHHHHHHHHHhcCCcceEEEeehh-hhcccccccCCcccccchHHHHHHhhcc--cceee-eecC
Q psy1960 347 ACSRMYVPESLF--CFCSCFLLLFLFSASVPVFCFCSCF-LLLFLFSTSVPVFCFCSCFLLLFLFSAS--VPVFC-FCGN 420 (428)
Q Consensus 347 a~srv~V~~si~--d~f~~~L~~~l~~l~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~ 420 (428)
....|+|.|.-+ +++++.+.+.+ ...++|+|+++.- +.|. -|+..+.||-+-.-- +-..| +||+
T Consensus 101 ~~dvV~IDEaQFf~~~~v~~l~~la-~~gi~Vi~~GLd~DF~~~---------~F~~~~~Ll~~Ad~v~kl~aiC~~CG~ 170 (219)
T 3e2i_A 101 NVDVIGIDEVQFFDDEIVSIVEKLS-ADGHRVIVAGLDMDFRGE---------PFEPMPKLMAVSEQVTKLQAVCAVCGS 170 (219)
T ss_dssp TCSEEEECCGGGSCTHHHHHHHHHH-HTTCEEEEEEESBCTTSC---------BCTTHHHHHHHCSEEEEECEECTTTCS
T ss_pred CCCEEEEechhcCCHHHHHHHHHHH-HCCCEEEEeecccccccC---------CCccHHHHHHhcceEEEeeeEccCCCC
Confidence 356778887654 35777776555 5899999999871 1122 355666666543322 34589 6999
Q ss_pred Ccccc
Q psy1960 421 SAWYG 425 (428)
Q Consensus 421 ~~~~~ 425 (428)
.|.+-
T Consensus 171 ~A~~~ 175 (219)
T 3e2i_A 171 SSSRT 175 (219)
T ss_dssp EECEE
T ss_pred cceEE
Confidence 98763
No 55
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=43.55 E-value=30 Score=28.66 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=33.7
Q ss_pred ccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcc
Q psy1960 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKN 298 (428)
Q Consensus 254 gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~ 298 (428)
|.+++++|+.+++-......+++.+|++||+......+.+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~ 97 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEER 97 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHC
Confidence 578888898876555544435799999999988888887766543
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=40.41 E-value=29 Score=29.87 Aligned_cols=114 Identities=13% Similarity=0.024 Sum_probs=70.8
Q ss_pred cceEEEECCCch-h-hhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHHHH-cCCCCccEEEeeC-CChhhhhhhhcC
Q psy1960 198 DGFVAAVSPFNF-T-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIE-AGVPPGVVNFVPA-DGPVFGDTITAS 273 (428)
Q Consensus 198 ~GVV~~I~P~Nf-P-~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll~e-AGlP~gvv~vv~g-~g~~~g~~L~~~ 273 (428)
.|.|+++..-+- + +..........|.|-.++--. -++ +.+++ .|+|-..++-++. .++.+++.+.+
T Consensus 11 ~g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~- 80 (152)
T 1b93_A 11 RKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE- 80 (152)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-
Confidence 477776666554 4 333444444445588887532 333 44456 8999877775553 23456776655
Q ss_pred CCeeEEEeeCC-------hhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCC
Q psy1960 274 PYLAGINFTGS-------VPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCG 342 (428)
Q Consensus 274 ~~v~~I~fTGS-------~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~G 342 (428)
.+|+.|+||-+ ...+..|.+.+..+-. |+.- +++ .++.++.+.+.+..
T Consensus 81 geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~I------P~~T--------------~la-tA~a~v~ai~~~~~ 135 (152)
T 1b93_A 81 GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNI------PVAT--------------NVA-TADFIIQSPHFNDA 135 (152)
T ss_dssp TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTC------CEES--------------SHH-HHHHHHTSGGGGSC
T ss_pred CCccEEEEcCCcccCCcccccHHHHHHHHHHcCC------CEEe--------------CHH-HHHHHHHHHhcccc
Confidence 57999999876 3456778888776654 2222 333 55777777777654
No 57
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.65 E-value=41 Score=28.23 Aligned_cols=67 Identities=7% Similarity=-0.055 Sum_probs=46.6
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCC-C----hhhhhhhhcCCCeeEEEeeCCh-----hhHHHHHH
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD-G----PVFGDTITASPYLAGINFTGSV-----PTFNRLWL 293 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~-g----~~~g~~L~~~~~v~~I~fTGS~-----~~g~~i~~ 293 (428)
|-.++- |.-+ ++.+++.|+|-..++-++.+ . +.+.+.+.++ +|+.|++|-+. ..+..|.+
T Consensus 50 Gf~i~A-----T~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g-~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 50 GFKLFA-----TEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDG-SIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TCEEEE-----EHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTT-SCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCEEEE-----CchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCC-CceEEEECCCCCCcCCccHHHHHH
Confidence 888764 2233 44567899998888877643 2 4577776655 79999998765 26777888
Q ss_pred HHhcccC
Q psy1960 294 QVGKNIN 300 (428)
Q Consensus 294 ~~a~~~~ 300 (428)
.+-.+..
T Consensus 120 ~Av~~~I 126 (143)
T 2yvq_A 120 TAVDSGI 126 (143)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 7777655
No 58
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=34.27 E-value=25 Score=30.35 Aligned_cols=50 Identities=12% Similarity=0.138 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC--CCeeEEEeeCChhhH
Q psy1960 238 SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS--PYLAGINFTGSVPTF 288 (428)
Q Consensus 238 ~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~--~~v~~I~fTGS~~~g 288 (428)
.+..+.+.+++.|...-...+++-+ +++.++|.+. .+.|.|+.||++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4577888999999877777888877 7777766432 357889999988754
No 59
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=33.26 E-value=34 Score=29.56 Aligned_cols=52 Identities=23% Similarity=0.098 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhh---cCCCeeEEEeeCChhhH
Q psy1960 237 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTIT---ASPYLAGINFTGSVPTF 288 (428)
Q Consensus 237 l~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~---~~~~v~~I~fTGS~~~g 288 (428)
..+.+|.+.+.+.|+..-...+++-+...+.+++. ...+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 45678899999999876666777665555555553 34568899999988754
No 60
>1g1p_A Conotoxin EVIA; three disulfide linkages, CIS/trans isomerism of Leu12- Pro13 peptide bond, hydroxyproline; HET: HYP; NMR {Synthetic} SCOP: g.3.6.1 PDB: 1g1z_A*
Probab=30.00 E-value=7.3 Score=23.79 Aligned_cols=14 Identities=29% Similarity=0.622 Sum_probs=11.5
Q ss_pred ccCCcccccchHHH
Q psy1960 391 TSVPVFCFCSCFLL 404 (428)
Q Consensus 391 ~~~~~~~~~~~~~~ 404 (428)
+|+-||-|||.|-|
T Consensus 2 dcikpygfcslpil 15 (33)
T 1g1p_A 2 DCIKPYGFCSLPIL 15 (33)
T ss_dssp CCBCTTSBCCCSSS
T ss_pred Cccccccceechhh
Confidence 57889999998865
No 61
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=29.97 E-value=26 Score=31.14 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC--CCeeEEEeeCChhhH
Q psy1960 237 LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS--PYLAGINFTGSVPTF 288 (428)
Q Consensus 237 l~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~--~~v~~I~fTGS~~~g 288 (428)
.....+.+.+++.|...-...+++-+...+.++|... .+.|.|+.||++..+
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 3567888999999987666777777666666666442 468899999988764
No 62
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=26.19 E-value=1e+02 Score=26.99 Aligned_cols=68 Identities=18% Similarity=0.104 Sum_probs=42.0
Q ss_pred CceEEEeCCch--HHHHHHHHHHHhcCCcceEEEeehh-hhcccccccCCcccccchHHHHHHhhcc--cceee-eecCC
Q psy1960 348 CSRMYVPESLF--CFCSCFLLLFLFSASVPVFCFCSCF-LLLFLFSTSVPVFCFCSCFLLLFLFSAS--VPVFC-FCGNS 421 (428)
Q Consensus 348 ~srv~V~~si~--d~f~~~L~~~l~~l~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 421 (428)
.+.|+|.|.-+ ++.++.+....+. +++++|+...- .-+.| |+..++|+.+-.-- +--.| +||+.
T Consensus 82 ~dvViIDEaqfl~~~~v~~l~~l~~~-~~~Vi~~Gl~~df~~~~---------F~~~~~L~~~AD~V~el~~iC~~Cg~~ 151 (191)
T 1xx6_A 82 TEVIAIDEVQFFDDEIVEIVNKIAES-GRRVICAGLDMDFRGKP---------FGPIPELMAIAEFVDKIQAICVVCGNP 151 (191)
T ss_dssp CSEEEECSGGGSCTHHHHHHHHHHHT-TCEEEEEECSBCTTSCB---------CTTHHHHHHHCSEEEECCEECTTTSSE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEecccccccCc---------CccHHHHHHHcccEEeeeeEccccCCc
Confidence 46777776533 3456666554554 89999998740 01222 46678888765443 33479 59998
Q ss_pred cccc
Q psy1960 422 AWYG 425 (428)
Q Consensus 422 ~~~~ 425 (428)
|.+.
T Consensus 152 a~~~ 155 (191)
T 1xx6_A 152 ATRT 155 (191)
T ss_dssp ECEE
T ss_pred ceEE
Confidence 7763
No 63
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.74 E-value=59 Score=27.96 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhc---CCCeeEEEeeCChhhH
Q psy1960 236 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA---SPYLAGINFTGSVPTF 288 (428)
Q Consensus 236 pl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~---~~~v~~I~fTGS~~~g 288 (428)
-..+..+.+.+++.|+......+++-+..++.++|.. +.+.|.|+.||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3456778889999998766666776655555555532 2357888899888653
No 64
>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2
Probab=22.46 E-value=18 Score=38.63 Aligned_cols=52 Identities=6% Similarity=0.006 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCC
Q psy1960 32 QETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHN 95 (428)
Q Consensus 32 ~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~ 95 (428)
.|.+.+||.. ...++.+.++++....+....+.+||| .+.++.... ++||++
T Consensus 617 ~Ns~g~d~~~-~~~~~~~~~~~~~~~~~~~~~~p~i~g-~~~~~~~~~----------v~nPa~ 668 (669)
T 1k87_A 617 DNSAGLDLAN-EHRLASLSSALLNSALQKWQALPMLEQ-PVAAGEMSP----------VINPAE 668 (669)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCCCCCCCCC-HHHHHHHHHHHHHHHhCCcccccccCC-CCCCCCcce----------eeCCCC
Confidence 7999999974 456788888888876543334778999 344433333 789986
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=22.03 E-value=1.6e+02 Score=22.01 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=29.7
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCC
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADG 263 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g 263 (428)
||-+|+|-.+-+ +..++.++.+.++|+ ++-.+.||+
T Consensus 21 ~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 21 GNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp TTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred CCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 999999987655 678888888998876 899888864
No 66
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.45 E-value=44 Score=29.23 Aligned_cols=53 Identities=23% Similarity=0.063 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhc---CCCeeEEEeeCChhhH
Q psy1960 236 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA---SPYLAGINFTGSVPTF 288 (428)
Q Consensus 236 pl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~---~~~v~~I~fTGS~~~g 288 (428)
-..+..+.+.+++.|...-...+++-+..++.++|.. +.+.|.|+.||++..+
T Consensus 39 Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred ehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3456788899999998766666777665666665533 2247899999988754
No 67
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.13 E-value=81 Score=27.84 Aligned_cols=116 Identities=9% Similarity=-0.091 Sum_probs=73.2
Q ss_pred cccceEEEECCCch-h-hhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHHHH-cCCCCccEEEeeC-CChhhhhhhh
Q psy1960 196 GLDGFVAAVSPFNF-T-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIE-AGVPPGVVNFVPA-DGPVFGDTIT 271 (428)
Q Consensus 196 ~p~GVV~~I~P~Nf-P-~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll~e-AGlP~gvv~vv~g-~g~~~g~~L~ 271 (428)
|..|.|+++..-+- + +..........|.|-.++. |.-++ +.+++ .|+|-..++-++. ..+.+++.+.
T Consensus 25 P~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~ 95 (178)
T 1vmd_A 25 DKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGAMIA 95 (178)
T ss_dssp CSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHH
T ss_pred CCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHHHHH
Confidence 33587777766555 4 3334444454455998874 33444 44556 8999777665543 2345677665
Q ss_pred cCCCeeEEEeeCC-------hhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCC
Q psy1960 272 ASPYLAGINFTGS-------VPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCG 342 (428)
Q Consensus 272 ~~~~v~~I~fTGS-------~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~G 342 (428)
+ .+|+.|+||-+ ...+..|.+.+..+-. |+.- +++ .++.++.+.+.+..
T Consensus 96 ~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~I------P~~T--------------nla-tA~A~v~ail~~~~ 151 (178)
T 1vmd_A 96 E-GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNI------PVAI--------------TRS-TADFLISSPLMNDV 151 (178)
T ss_dssp T-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTC------CEES--------------SHH-HHHHHHHSGGGGSC
T ss_pred C-CCccEEEEccCccCCCcccccHHHHHHHHHHcCC------CEEe--------------CHH-HHHHHHHHHhcccc
Confidence 5 57999999976 3357888888877654 2222 333 56788888877664
No 68
>2ab9_A Pro-SFTI-1; protein, beta-sheet, random coil, hydrolase inhibitor; NMR {Helianthus annuus}
Probab=20.69 E-value=30 Score=20.80 Aligned_cols=11 Identities=36% Similarity=0.896 Sum_probs=8.4
Q ss_pred cccCCcccccc
Q psy1960 390 STSVPVFCFCS 400 (428)
Q Consensus 390 ~~~~~~~~~~~ 400 (428)
..|+||.|||.
T Consensus 18 tksippicfpd 28 (31)
T 2ab9_A 18 TKSIPPICFPD 28 (31)
T ss_dssp CSSSSCSSSSC
T ss_pred cccCCCcccCC
Confidence 45888888874
No 69
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=20.64 E-value=1.1e+02 Score=27.60 Aligned_cols=68 Identities=13% Similarity=0.052 Sum_probs=41.5
Q ss_pred CceEEEeCCch--HHHHHHHHHHHhcCCcceEEEeehh-hhcccccccCCcccccchHHHHHHhhcc--cceeee-ecCC
Q psy1960 348 CSRMYVPESLF--CFCSCFLLLFLFSASVPVFCFCSCF-LLLFLFSTSVPVFCFCSCFLLLFLFSAS--VPVFCF-CGNS 421 (428)
Q Consensus 348 ~srv~V~~si~--d~f~~~L~~~l~~l~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 421 (428)
.+.|+|.|..+ ++.++.+....+ .+++++|+...- .-+. -|+.-++||.+-.-- +--.|. ||+.
T Consensus 102 ~dvViIDEaQF~~~~~V~~l~~l~~-~~~~Vi~~Gl~~DF~~~---------~F~~~~~Ll~~AD~Vtel~aiC~~Cg~~ 171 (214)
T 2j9r_A 102 MDVIAIDEVQFFDGDIVEVVQVLAN-RGYRVIVAGLDQDFRGL---------PFGQVPQLMAIAEHVTKLQAVCSACGSP 171 (214)
T ss_dssp CCEEEECCGGGSCTTHHHHHHHHHH-TTCEEEEEECSBCTTSC---------BCTTHHHHHHHCSEEEECCCBCTTTSSB
T ss_pred CCEEEEECcccCCHHHHHHHHHHhh-CCCEEEEEecccccccC---------ccccHHHHHHhcccEEeeeeEecCcCCc
Confidence 46777777654 344544443333 489999999850 1222 356667888764433 334785 9998
Q ss_pred cccc
Q psy1960 422 AWYG 425 (428)
Q Consensus 422 ~~~~ 425 (428)
|.+-
T Consensus 172 A~~~ 175 (214)
T 2j9r_A 172 ASRT 175 (214)
T ss_dssp CCEE
T ss_pred ceEE
Confidence 8763
No 70
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=20.18 E-value=1.3e+02 Score=27.76 Aligned_cols=88 Identities=14% Similarity=0.009 Sum_probs=54.3
Q ss_pred EEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcc--cCcccC
Q psy1960 227 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKN--INVYKN 304 (428)
Q Consensus 227 VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~--~~~~~~ 304 (428)
+|.+|++.+......+.+.+++.|+.- + ..+.|.|+.-|+..|.....+..... -.
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v--------~----------~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~---- 62 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY--------D----------DVEPEIVISIGGDGTFLSAFHQYEERLDEI---- 62 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE--------C----------SSSCSEEEEEESHHHHHHHHHHTGGGTTTC----
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe--------C----------CCCCCEEEEEcCcHHHHHHHHHHhhcCCCC----
Confidence 456665555445556666677766531 0 23578999999999988877776543 22
Q ss_pred CCc-EEEecCCCceeEEcCCCCHHHHHHHHHHHHh
Q psy1960 305 FPR-LIGECGGKNFHFIHASANVESVVNGTIRSAF 338 (428)
Q Consensus 305 ~~~-~~lElGGkn~~iV~~dADld~Aa~~iv~saf 338 (428)
| +-.-+|-.+..-=....|++.+++.++.+.+
T Consensus 63 --PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 63 --AFIGIHTGHLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp --EEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred --CEEEEeCCCCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 5 3445554443211124578999999887743
Done!