BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1961
(147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 193 bits (491), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 113/148 (76%), Gaps = 5/148 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
I+ GGQ +ES GY+++P I+++KDP E IM EEIFGPVLT++VYPD +TLK+V +T
Sbjct: 415 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTT 474
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAVFA+D++ + L+ AAGN+YINDKSTGSVVGQQPFG GTNDK GG
Sbjct: 475 SYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
PHY+LRW +PQ IKET PL +W+Y YM
Sbjct: 535 PHYILRWTSPQVIKETHKPLGDWRYSYM 562
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD +TL++V +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAVF++D+ + L+ AAGN+YINDKSTGS+VGQQPFG GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
PHY+LRW +PQ IKET PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD +TL++V +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAVF++D+ + L+ AAGN+YINDKSTGS+VGQQPFG GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
PHY+LRW +PQ IKET PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 187 bits (475), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD +TL++V +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAVF++D+ + L+ AAGN+YINDKSTGS+VGQQPFG GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
PHY+LRW +PQ IKET PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
++ GG+ D+S GYFI+PTI DP ++M EEIFGPV+ D+ L+ V ++T
Sbjct: 385 LVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAF--SKVSSFDEALE-VANNT 441
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAV ++ R + + GN Y N TG++VG PFG GT+ KAGG
Sbjct: 442 EYGLTGAVITKNRDHINRAKQE--FHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGG 499
Query: 119 PHYVLRWATPQSIKETF 135
P Y+ ++I E F
Sbjct: 500 PDYLALHMQAKTISEMF 516
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 92.0 bits (227), Expect = 9e-20, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
++ GG+ D S G+FIQPTI+ DP IM EEIFGPV+ D D L+I ++T
Sbjct: 385 LMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAF--SKANDFDHALEI-ANNT 441
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
Y LTGAV + + ++ ++ GN Y N TG++VG PFG GT+ KAGG
Sbjct: 442 EYGLTGAVITRNRAHIEQA--KREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGG 499
Query: 119 PHYVLRWATPQSIKETF 135
P Y+ +++ E +
Sbjct: 500 PDYLALHMQAKTVSEMY 516
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 84.0 bits (206), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
GYF+ TI+ P +I EEIFGPVL V KD D+ ++ +ST +ALTG +F+
Sbjct: 890 GYFVPMTIIGGIKPEHRIAQEEIFGPVLA--VMRAKDFDQAIEW-ANSTQFALTGGIFSR 946
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLRWATPQ 129
+ + + GN YIN +TG++V +QPFG G KAGGP Y+L + P+
Sbjct: 947 SPEHLAKARREFR--VGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004
Query: 130 SIKET-----FVPLTE 140
+ E F P+ E
Sbjct: 1005 VVTENTMRRGFAPIEE 1020
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
+++ GG+ E GYFI PT+ P +I EEIFGPVL++ KD + L++ D
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63 TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
TPY LTG V++ E + +R ++ GN Y N K TG++VG QPFG GTN
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
K G Y+ + +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
+++ GG+ E GYFI PT+ P +I EEIFGPVL++ KD + L++ D
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63 TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
TPY LTG V++ E + +R ++ GN Y N K TG++VG QPFG GTN
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
K G Y+ + +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
+++ GG+ E GYFI PT+ P +I EEIFGPVL++ KD + L++ D
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63 TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
TPY LTG V++ E + +R ++ GN Y N K TG++VG QPFG GTN
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
K G Y+ + +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 80.9 bits (198), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G F+ P I + + + +TEE+FGP+L + Y ++L++ L+ + + T Y LT V +
Sbjct: 867 GCFVAPHIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAI-ERTGYGLTLGVHSR 923
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLRWATPQ 129
+ + +D ++ GN Y+N G+VVG QPFG GT KAGGPHY+ R+AT Q
Sbjct: 924 IDDSIEAIIDRVQ--VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQ 981
Query: 130 SI 131
++
Sbjct: 982 TV 983
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G F +PT++ D +I+ EE+FGPV+T+ + + + +++ DS Y L GAVF++
Sbjct: 393 GLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETE--QEAIQLANDSI-YGLAGAVFSK 449
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
D +R + LK G +IND Q P+GG
Sbjct: 450 DIGKAQRVANKLKL--GTVWINDFH--PYFAQAPWGG 482
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
++ GG +D+S Y I PTI+ DP +M EEIFGPV+ I + L++ ++ +
Sbjct: 301 KVAHGGTWDQSSRY-IAPTILVDVDPQSPVMQEEIFGPVMPIVCV--RSLEEAIQFINQR 357
Query: 63 -TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
P AL VF+ +E K+ + + ++G ND V PFGG + G ++
Sbjct: 358 EKPLALY--VFSNNEKVIKKMIAET--SSGGVTANDVIVHITVPTLPFGGVGNSGMGAYH 413
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
GYF +PTI D I EEIFGPV ++ Y DLD+ ++I D T Y L G V +
Sbjct: 361 GYFARPTIFINVDNQXTIAQEEIFGPVXSVITY--NDLDEAIQIAND-TKYGLAGYVIGK 417
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
D+ + ++ AG IN+ + PFGG
Sbjct: 418 DKETLHKVARSIE--AGTVEINEAGRKPDL---PFGG 449
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 4 IIGGGQYDESCG--YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
I GGG + G ++QPT+ I EEIFGPV+ + + D+D + +
Sbjct: 358 ITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED---EVLARAN 414
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT--------N 113
+T + L G VF D + R +D L+ AG +IN + V + PFGG+ N
Sbjct: 415 ATEFGLAGGVFTADLARAHRVVDGLE--AGTLWINTYNLCPV--EIPFGGSKQSGFGREN 470
Query: 114 DKAGGPHYVLRWATPQSIKETFVPLTEWKYPY 145
A HY +K +V + PY
Sbjct: 471 SAAALEHY-------SELKTVYVSTGKVDAPY 495
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 11 DESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGA 70
D S G ++ PT+ ++ + KI EEIFGPVL P KD ++ L+ D T Y L
Sbjct: 385 DLSRGNYLLPTVFVGENHM-KIAQEEIFGPVLVAI--PFKDEEEALRKAND-TKYGLAAY 440
Query: 71 VFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG---GTNDKAGGPHYVLRWAT 127
VF D R L+ AG Y+N + + PFG G+ D+ G Y L + T
Sbjct: 441 VFTRDLERAHRLA--LELEAGMVYLNSHNVRHL--PTPFGGVKGSGDRREGGTYALDFYT 496
Query: 128 PQSIKETFVPLTEWKYPYMG 147
+K +PL P G
Sbjct: 497 --DLKTIALPLRPPHVPKFG 514
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG G+F QPT+ + I EE FGP++ I + D D+D L +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+T + L VF D K K AG +IN + V PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 6 GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
GGG + GYFIQPT+ +I EEIFGPV I + K LD +K ++T Y
Sbjct: 371 GGGPWGNK-GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF--KSLDDVIK-RANNTFY 426
Query: 66 ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
L+ +F D K +G ++N S V Q PFGG
Sbjct: 427 GLSAGIFTND--IDKAITVSSALQSGTVWVNCYSV--VSAQCPFGG 468
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
EI GG+ G+F QPT+V ++I+ E+FGPV+++ + K D + DS
Sbjct: 368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK--DDAVAWANDS 425
Query: 63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
Y L +V+ +D S R L+Y G +IN + + + P GG G
Sbjct: 426 D-YGLASSVWTKDISKAXRAASRLQY--GCTWIN--THFXLTNEXPHGGIKQSGYG 476
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
GY+++PT+ P +I EEIFGPVL++ + +D TL + T Y LT + ++
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTL---ANDTEYGLTNYIQSQ 438
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
D S +R ++ ++ GS G F G + G
Sbjct: 439 DRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREGG 481
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 4 IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
I+ GG E GY+I+PTIV +I EE+FGPVL + + + D+ + + D
Sbjct: 356 ILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSE--DEAIALAND 413
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
T Y L AVF+ D +R L+ G ++N V Q P+GG G
Sbjct: 414 -TEYGLAAAVFSNDLERCERITKALE--VGAVWVNCSQPCFV--QAPWGGIKRSGFG 465
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 6 GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
GGG + GYFIQPT+ +I EEIFGPV I + K LD+ +K ++T Y
Sbjct: 371 GGGPWGNK-GYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKF--KSLDEVIK-RANNTYY 426
Query: 66 ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
L VF +D K AG ++N S Q P GG
Sbjct: 427 GLVAGVFTKD--LDKAVTVSSALQAGTVWVNCYLAAS--AQSPAGG 468
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 7 GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
GG+ E GY+ PT++ IM EE FGPVL + + L++ + + DS Y
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEEAISMANDSD-YG 410
Query: 67 LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
LT +++ ++ + + + LK+ G YIN ++ ++ G + GG + K G
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
Y+
Sbjct: 469 YL 470
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 7 GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
GG+ E GY+ PT++ IM EE FGPVL + + L+ + + DS Y
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEDAISMANDSD-YG 410
Query: 67 LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
LT +++ ++ + + + LK+ G YIN ++ ++ G + GG + K G
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
Y+
Sbjct: 469 YL 470
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 7 GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
GG+ E GY+ PT++ IM EE FGPVL + + L+ + + DS Y
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEDAISMANDSD-YG 410
Query: 67 LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
LT +++ ++ + + + LK+ G YIN ++ ++ G + GG + K G
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
Y+
Sbjct: 469 YL 470
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
++++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +
Sbjct: 359 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 416
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
ST Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 417 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 461
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 7 GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
GG+ G+FI+PT+ +I EEIFGPV I + K +D+ ++ +S +
Sbjct: 369 GGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRF--KTMDEVIERANNSD-FG 425
Query: 67 LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
L AVF D K + AG +IN ++ Q PFGG
Sbjct: 426 LVAAVFTND--INKALMVSSAMQAGTVWIN--CYNALNAQSPFGG 466
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G+FI+PTI+ +I EE+FGPVL + + + D+ +++ D T Y L GAV +
Sbjct: 389 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTE--DEAIELAND-TQYGLAGAVISG 445
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
D +R +++ AG ++N + Q P+GG N ++G
Sbjct: 446 DRERCQRLSEEID--AGCIWVN--CSQPCFCQAPWGG-NKRSG 483
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
GYF+ P ++ + EEIFGPV+++ + D ++ + ++T + L VF
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF---DTEEEVLQRANNTTFGLASGVFTR 435
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
D S R +L+ AG YIN S V + PFGG
Sbjct: 436 DISRAHRVAANLE--AGTCYINTYSISPV--EVPFGG 468
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 7 GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS-TPY 65
GG D + Y I PTI+ DP +M EEIFGPVL I + L++ ++ + P
Sbjct: 322 GGTGDAATRY-IAPTILTDVDPQSPVMQEEIFGPVLPIVCV--RSLEEAIQFINQREKPL 378
Query: 66 ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
AL +F+ ++ K+ + + ++G ND + PFGG + G ++
Sbjct: 379 ALY--MFSSNDKVIKKMIAET--SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYH 430
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 4 IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
I+ GG+ + GY++QPTI+ + +I EE+FGPVL + + K ++ +++ D
Sbjct: 373 ILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF--KTEEQAIELAND 430
Query: 62 STPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGG 111
T Y L AV ++D KRC K + G +IN + + P+GG
Sbjct: 431 -TKYGLGAAVMSKD---VKRCERFTKAFQTGIIWIN--CSQPTFNELPWGG 475
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
+++ GG GYFIQPT+ I EEIFGPV+ I + K +++ + +S
Sbjct: 365 KLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKF--KSMEEVVGRANNS 422
Query: 63 TPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
Y L AVF +D LD Y AG ++N V G Q PFGG
Sbjct: 423 K-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 466
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G ++ PT+ I+ EEIFGPV++I VY D+ D+ ++ D T Y L V +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 421
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D + R + L+ AG +IN + G + P GG G
Sbjct: 422 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 461
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G ++ PT+ I+ EEIFGPV++I VY D+ D+ ++ D T Y L V +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D + R + L+ AG +IN + G + P GG G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G ++ PT+ I+ EEIFGPV++I VY D+ D+ ++ D T Y L V +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 421
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D + R + L+ AG +IN + G + P GG G
Sbjct: 422 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 461
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 4 IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
I+ GG+ + GY++QPTI+ + +I EE+FGPVL + + K ++ +++ D
Sbjct: 373 ILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF--KTEEQAIELAND 430
Query: 62 STPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGG 111
T Y L AV ++D KRC K + G +IN + + P+GG
Sbjct: 431 -TKYGLGAAVMSKD---VKRCERFTKAFQTGIIWIN--CSQPTFNELPWGG 475
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G ++ PT+ I+ EEIFGPV++I VY D+ D+ ++ D T Y L V +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D + R + L+ AG +IN + G + P GG G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G ++ PT+ I+ EEIFGPV++I VY D+ D+ ++ D T Y L V +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D + R + L+ AG +IN + G + P GG G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 45.4 bits (106), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 7 GGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
GG+ +E G++ +PT+ + K+ TEE FGP+ + +P D+++ + + D T Y
Sbjct: 334 GGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFP--DVEEAVYLAND-TIY 390
Query: 66 ALTGAVFA--EDESFQ-KRCLDDLKYAAGNYYINDKS 99
L+ AVFA EDE+ + R L+ AG IND +
Sbjct: 391 GLSAAVFAGSEDEALKVARQLN-----AGAISINDAA 422
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 2 SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
+ ++ GG E G+FIQPT+ D I EEIFGPVL I Y D + D + I
Sbjct: 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPY-DTEED-AIAIA 408
Query: 60 TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN 96
DS Y L G+V+ D + ++ G Y IN
Sbjct: 409 NDSV-YGLAGSVWTTDVPKGIKISQQIR--TGTYGIN 442
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 2 SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
+ I+ GG+ E GYF++PTI+ +I EE+FGPVL + + + ++ + +
Sbjct: 357 ATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTE--EEAINLA 414
Query: 60 TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
D T Y L AV + D +R L+ AG +IN + Q P+GG
Sbjct: 415 ND-THYGLGSAVMSNDLERCERLSKALQ--AGIVWINCAQPSFI--QAPWGG 461
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 2 SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
+ I+ GG E G+FI+PTI+ +I EE+FGPVL + + + ++ + +
Sbjct: 357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTE--EEAIDLA 414
Query: 60 TDSTPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
D T Y L AV + D +RC K + AG ++N + Q P+GG G
Sbjct: 415 ND-TVYGLGAAVISND---LERCERVTKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFG 468
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 43.1 bits (100), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG+ E G F QPTI+ K+ EE FGP+ +F + D + + +
Sbjct: 351 ARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD---EADVIAQAN 407
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
T + L +A D S R + L+Y I +TG + + PFGG KA G
Sbjct: 408 DTEFGLAAYFYARDLSRVFRVGEALEYG-----IVGINTGIISNEVAPFGGI--KASG 458
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 43.1 bits (100), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG+ E G F QPTI+ K+ EE FGP+ +F + D + + +
Sbjct: 351 ARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD---EADVIAQAN 407
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
T + L +A D S R + L+Y I +TG + + PFGG KA G
Sbjct: 408 DTEFGLAAYFYARDLSRVFRVGEALEYG-----IVGINTGIISNEVAPFGGI--KASG 458
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
++I GG+ + GY+ PT++ + I+ +E+FGPV++ V P + ++ + DS
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVS--VTPFDNEEQVVNWANDS 423
Query: 63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
Y L +V+ +D R L+Y G ++N +V + P GG
Sbjct: 424 Q-YGLASSVWTKDVGRAHRVSARLQY--GCTWVNTHFM--LVSEMPHGG 467
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 40.4 bits (93), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 9 QYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
QY E S G F +PTI+ + +E+FGP+ +FV D + +++ DS+ Y
Sbjct: 333 QYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDD--NAAIQLANDSS-YG 389
Query: 67 LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
L +V D K+ ++ G IN + S G+ PFGG G
Sbjct: 390 LGSSVIGSDIDRAKKVSAQIE--TGXTVINGRWITS--GELPFGGIKKSGYG 437
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 39.3 bits (90), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
++GG + G + PT+ P I EEIFGPVL+ + D L ++T
Sbjct: 370 LLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVAL---ANAT 426
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
+ L+ +V++ + + + ++ AG +IN G+ + P GG
Sbjct: 427 EFGLSASVWSTNLETALQTIRRIR--AGRCWINSVIDGT--PELPIGG 470
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
S + GG ++ G+F +PT++ P + EE FGP+ +F + ++ L + +
Sbjct: 355 SLMTGGKRHALGHGFF-EPTVLTGVKPDMDVAKEETFGPLAPLFRFAS---EEELVRLAN 410
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKA---G 117
T + L +++ D R + L+Y G IN TG + + PFGG
Sbjct: 411 DTEFGLAAYLYSRDIGRVWRVAEALEY--GMVGIN---TGLISNEVAPFGGVKQSGLGRE 465
Query: 118 GPHY 121
G HY
Sbjct: 466 GSHY 469
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
++ GG+ + G +++PTIV I E F P+L +F + + ++ + +
Sbjct: 368 VVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN---EEEVFAWNNEV 424
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
L+ ++F +D R L G +N ++G+ +G FGG GG
Sbjct: 425 KQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGG 478
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 34.7 bits (78), Expect = 0.018, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G + PT++ P ++ EE FGPVL I KD ++ + + ++ + Y L ++F +
Sbjct: 365 GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRV--KDANEAISL-SNQSDYGLQASIFTK 421
Query: 75 DESFQKRCLDDLKY-AAGNYYINDKS 99
D R ++ K+ G +IN K+
Sbjct: 422 DTD---RAINIGKHLEVGTVHINAKT 444
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 34.7 bits (78), Expect = 0.021, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
+++ GG+ D++ Y PTI++ D + E F PV+ I ++++ + +S
Sbjct: 339 KLLLGGKRDKALFY---PTILEV-DRDNILCKTETFAPVIPIIRTNEEEMID----IANS 390
Query: 63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
T Y L A+F D + + ++L++ G IND S PFGG G
Sbjct: 391 TEYGLHSAIFTNDINKSLKFAENLEF--GGVVINDSSLFR-QDNMPFGGVKKSGLG 443
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 34.3 bits (77), Expect = 0.026, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
+ ++ GG+ G + T++ P +E+FGPV I V KD L + D
Sbjct: 331 ARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITV--AKDAAHALALAND 388
Query: 62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
S + L+ +F D++ L+ G +IN S + FGG G
Sbjct: 389 SE-FGLSATIFTADDTLAAEXAARLE--CGGVFINGYSASD--ARVAFGGVKKSGFG 440
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 3 EIIGGGQYDESCGYFIQPTI--VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
+++ G Q D S + V+ DPL M+EE+FGP+L + + + + V
Sbjct: 326 QVLVGSQADVSKRALSATVVDGVEWNDPL---MSEELFGPILPVLEF--DSVRTAIDQVN 380
Query: 61 DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPH 120
P L VF +D K ++ ++ +G+ +N + PFGG G +
Sbjct: 381 KHHPKPLAVYVFGKDMDVAKGIINQIQ--SGDAQVNGVMLHAFSPYLPFGGIGASGMGEY 438
Query: 121 Y 121
+
Sbjct: 439 H 439
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 3 EIIGGGQYDESCGYFIQPTI--VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
+++ G Q D S + V+ DPL M+EE+FGP+L + + + + V
Sbjct: 326 QVLVGSQADVSKRALSATVVDGVEWNDPL---MSEELFGPILPVLEF--DSVRTAIDQVN 380
Query: 61 DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPH 120
P L VF +D K ++ ++ +G+ +N + PFGG G +
Sbjct: 381 KHHPKPLAVYVFGKDMDVAKGIINQIQ--SGDAQVNGVMLHAFSPYLPFGGIGASGMGEY 438
Query: 121 Y 121
+
Sbjct: 439 H 439
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 33.5 bits (75), Expect = 0.044, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 2 SEIIGGGQYDESCGYFIQPTIVQ--TKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
+++I GG+ E G F +P I+ T D L + EE FGP+ +F + D ++ +
Sbjct: 374 AKLITGGK--ELGGLFFEPGILTGVTSDML--VAKEETFGPLAPLFAF---DTEEEVIAQ 426
Query: 60 TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
+ T + L + E+ S R + L+Y + +TG + + PFGG G
Sbjct: 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGH-----NTGLISNEVAPFGGVKQSGLG 481
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 32.7 bits (73), Expect = 0.081, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS---TPYALTGAV 71
G F PT+VQ D EE FGP++ ++ +T + V D+ T + L V
Sbjct: 367 GLFFPPTVVQGVDREXCCYQEETFGPLVPXALF------RTEEEVIDAGNDTEFGLASYV 420
Query: 72 FAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTN----DKAGGPHYVLRWAT 127
F D +R L++ + + TG + PFGG + GG + +
Sbjct: 421 FTADAERAQRVAAGLRFGHVGW---NTGTGP-TPEAPFGGXKASGIGREGGLEGLFEFVE 476
Query: 128 PQSIKETF 135
Q++ F
Sbjct: 477 AQTVPRGF 484
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 32.0 bits (71), Expect = 0.14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G + P + +I EEIFGP++++ D+ L +D + L+ AV+++
Sbjct: 367 GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASD---FGLSAAVWSK 423
Query: 75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQP---FGGTNDKAGG 118
D + L+ +G +IND + V +P FGG+ + G
Sbjct: 424 D--IDRAAQFALQIDSGMVHINDLT----VNDEPHVMFGGSKNSGLG 464
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 30.8 bits (68), Expect = 0.25, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
GYF+ PTI I +EIF PVL++ K+L + ++I S
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRV--KNLKEAIEIANKS 405
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
G + +PT++ ++ EE FGP+L I +++ ++ DS Y L+ V +
Sbjct: 371 GCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV--SSMEQAIEFCNDSI-YGLSAYVHTQ 427
Query: 75 DESFQKRCLDDLKYAAGNYYIN----DKSTGSVVG--QQPFGGTNDKAGGPHYV 122
+ + + DL+ G YIN ++ G G Q FGG + K G Y+
Sbjct: 428 SFANINQAISDLE--VGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYL 479
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
++ GG+ + G +++PTI+ I+ E F P+L + + ++ +
Sbjct: 366 LVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWN---NEV 422
Query: 64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
L+ ++F +D R L G +N ++G+ +G FGG GG
Sbjct: 423 QQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGG 476
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 35 EEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED-ESFQKRCLDDLKYAAGNY 93
EE FGP+L + Y D ++ ++T Y L + ++ E F++ ++ AG
Sbjct: 379 EEFFGPLLQVIRY--SDFAAAIR-EANATQYGLAAGLLSDSRERFEQFLVES---RAGIV 432
Query: 94 YINDKSTGSVVGQQPFGGTNDKAGGPH 120
N + TG+ PFGG A G H
Sbjct: 433 NWNKQLTGA-ASSAPFGGIG--ASGNH 456
>pdb|3CLK|A Chain A, Crystal Structure Of A Transcription Regulator From
Lactobacillus Plantarum
pdb|3CLK|B Chain B, Crystal Structure Of A Transcription Regulator From
Lactobacillus Plantarum
Length = 290
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 25 TKDPLEK--IMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS-TPYALTGAVFAEDESFQKR 81
+ DP E+ + I PV I + D L+++ S PY F +D F
Sbjct: 48 SADPEEQKHALLTAIERPVXGILLLSIALTDDNLQLLQSSDVPYCFLSXGFDDDRPFISS 107
Query: 82 CLDDLKYAAGNYYIND--KSTG-SVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPL 138
+D+ Y A N IN+ + G + + Q P+ G AG +++KE + +
Sbjct: 108 DDEDIGYQATNLLINEGHRQIGIAGIDQYPYTGRKRLAG---------YKKALKEANIAI 158
Query: 139 T-EWKYP 144
EW P
Sbjct: 159 NQEWIKP 165
>pdb|4DSG|A Chain A, Crystal Structure Of Oxidized Udp-Galactopyranose Mutase
pdb|4DSG|B Chain B, Crystal Structure Of Oxidized Udp-Galactopyranose Mutase
pdb|4DSH|A Chain A, Crystal Structure Of Reduced Udp-Galactopyranose Mutase
pdb|4DSH|B Chain B, Crystal Structure Of Reduced Udp-Galactopyranose Mutase
Length = 484
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-GTNDKAGGPHY 121
PY + E +KRCLD+L + Y + + FG G D P+
Sbjct: 101 VPYPFQNNIHRLPEQDRKRCLDELVRSHARTYTEPPNNFEESFTRQFGEGIADIFMRPYN 160
Query: 122 VLRWATPQSIKET 134
WA P + T
Sbjct: 161 FKVWAVPPCLMST 173
>pdb|2ZWY|A Chain A, Alpha-L-Fucosidase
pdb|2ZWY|B Chain B, Alpha-L-Fucosidase
pdb|2ZWZ|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, Core1
pdb|2ZWZ|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, Core1
pdb|2ZX5|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, F10
pdb|2ZX5|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, F10
pdb|2ZX6|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, F10-1c
pdb|2ZX6|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, F10-1c
pdb|2ZX7|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, F10-2c
pdb|2ZX7|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, F10-2c
pdb|2ZX8|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, F10-2c-O
pdb|2ZX8|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, F10-2c-O
pdb|2ZX9|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, B4
pdb|2ZX9|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, B4
pdb|2ZXA|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, Fnj-Acetyl
pdb|2ZXA|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, Fnj-Acetyl
pdb|2ZXB|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, Ph-6fnj
pdb|2ZXB|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, Ph-6fnj
pdb|2ZXD|A Chain A, Alpha-L-Fucosidase Complexed With Inhibitor, Iso-6fnj
pdb|2ZXD|B Chain B, Alpha-L-Fucosidase Complexed With Inhibitor, Iso-6fnj
Length = 455
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
Query: 71 VFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
V D + ++ +DLKY YY + P G ND+ G PH+
Sbjct: 220 VLWNDMGWPEKGKEDLKYLFAYYY----------NKHPEGSVNDRWGVPHW 260
>pdb|1ODU|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
In Complex With Fucose
pdb|1ODU|B Chain B, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
In Complex With Fucose
Length = 449
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
Query: 71 VFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
V D + ++ +DLKY YY + P G ND+ G PH+
Sbjct: 220 VLWNDMGWPEKGKEDLKYLFAYYY----------NKHPEGSVNDRWGVPHW 260
>pdb|1HL8|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
pdb|1HL8|B Chain B, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
pdb|1HL9|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
In Complex With A Mechanism Based Inhibitor
pdb|1HL9|B Chain B, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase
In Complex With A Mechanism Based Inhibitor
Length = 449
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
Query: 71 VFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
V D + ++ +DLKY YY + P G ND+ G PH+
Sbjct: 220 VLWNDMGWPEKGKEDLKYLFAYYY----------NKHPEGSVNDRWGVPHW 260
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 115 KAGGPHYVLRWATPQSIKETFVPLTEW 141
+A G H+V+ P++++ET + EW
Sbjct: 290 RADGTHFVMDRRGPRAVQETVTAMWEW 316
>pdb|1NI7|A Chain A, Northeast Structural Genomic Consortium Target Er75
Length = 155
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 127 TPQSIKETFVPLTEWKYPY 145
T ++++ TF PLT+W+ Y
Sbjct: 16 TAETLRNTFAPLTQWEDKY 34
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,281,457
Number of Sequences: 62578
Number of extensions: 228157
Number of successful extensions: 481
Number of sequences better than 100.0: 84
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 392
Number of HSP's gapped (non-prelim): 84
length of query: 147
length of database: 14,973,337
effective HSP length: 90
effective length of query: 57
effective length of database: 9,341,317
effective search space: 532455069
effective search space used: 532455069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)