BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1962
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7SY23|AL4A1_DANRE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Danio rerio GN=aldh4a1 PE=2 SV=1
Length = 556
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 KLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSD 62
++K+GD VE +F AVID K+F RI G+++HA+SSP+L+II GG D++ E +
Sbjct: 367 QIKVGDPVEDFSTFFSAVIDDKSFSRIKGWLEHARSSPHLKIIAGGNCDDKKGYFVEPTI 426
Query: 63 LE 64
+E
Sbjct: 427 IE 428
>sp|Q54RA2|AL4A1_DICDI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0283293 PE=3 SV=1
Length = 558
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51
+K+G + SF AVIDK +F+ I YI+HAK+SP+ EII GG+ D
Sbjct: 367 MKMGQSDDFSSFVSAVIDKNSFNNIQSYIEHAKASPDAEIIVGGKCD 413
>sp|Q8CHT0|AL4A1_MOUSE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus
musculus GN=Aldh4a1 PE=1 SV=3
Length = 562
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 4 KLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE 52
++K+GD E +F AVID KAF RI +++HA+SSP+L I+ GGQ +E
Sbjct: 373 RIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 422
>sp|P0C2X9|AL4A1_RAT Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Aldh4a1 PE=1 SV=1
Length = 563
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 4 KLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE 52
++K+G+ E +F AVID KAF RI +++HA+SSP+L I+ GGQ +E
Sbjct: 373 RIKVGNPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 422
>sp|P30038|AL4A1_HUMAN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Homo sapiens GN=ALDH4A1 PE=1 SV=3
Length = 563
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 4 KLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE 52
++K+GD E +F AVID K+F RI +++HA+SSP+L I+ GG+ D+
Sbjct: 374 RIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDD 423
>sp|A7YWE4|AL4A1_BOVIN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos
taurus GN=ALDH4A1 PE=2 SV=1
Length = 563
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 LDKLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE 52
L +K+G+ E +F AVID K+F RI +++HA+SSP+L I+ GG D+
Sbjct: 372 LGGIKVGNPAEDFGTFFSAVIDAKSFGRIRKWLEHARSSPSLTILAGGHCDD 423
>sp|P07275|PUT2_YEAST Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PUT2 PE=1 SV=2
Length = 575
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE 52
F G VI +++FD++ I+ AK P LEI+ GGQYD+
Sbjct: 398 FMGPVIHEQSFDKLVKVIEDAKKDPELEILYGGQYDK 434
>sp|P78568|PUT2_AGABI Delta-1-pyrroline-5-carboxylate dehydrogenase OS=Agaricus bisporus
GN=pruA PE=3 SV=1
Length = 546
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
K+K+G +++ G VI ++A+D ITG+IK AK +IGG D +G
Sbjct: 358 KIKVGPCLDWNNYMGPVIGRRAYDNITGFIKKAKEEGGEVLIGGSGDDSKG 408
>sp|Q9P8I0|PUT2_EMENI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=prnC PE=3 SV=2
Length = 572
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51
LK+G +F G VI + +F ++ I AK+ P LE++ GG YD
Sbjct: 381 LKVGPPSDFTNFCGPVIHEASFTKLAKVIDEAKNDPELELLAGGSYD 427
>sp|Q8CN04|ROCA_STAES 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=rocA PE=3 SV=1
Length = 514
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ KL +G+ E ++F G VI++K FD+I YI+ K LE GGG D G
Sbjct: 343 LTQKLTLGNTE-ENTFMGPVINQKQFDKIKNYIEIGKKEGKLE-TGGGTDDSTG 394
>sp|Q5HL59|ROCA_STAEQ 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=rocA PE=3
SV=1
Length = 514
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ KL +G+ E ++F G VI++K FD+I YI+ K LE GGG D G
Sbjct: 343 LTQKLTLGNTE-ENTFMGPVINQKQFDKIKNYIEIGKKEGKLE-TGGGTDDSTG 394
>sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus
GN=Aldh1b1 PE=1 SV=1
Length = 519
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES--S 61
K K+G+ D+ G +DK+ F++I GYI+ + + GG ++ ERG +K +
Sbjct: 347 KRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLLCGGERFGERGFFIKPTVFG 406
Query: 62 DLEDLAFIARNTL 74
+++D IAR +
Sbjct: 407 NVQDDMRIAREEI 419
>sp|Q9CZS1|AL1B1_MOUSE Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1
PE=2 SV=1
Length = 519
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 6 KIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES--SDL 63
K+G+ D+ G +DK+ F+RI GYI+ + + GG + ERG +K + D+
Sbjct: 349 KVGNPFELDTQQGPQVDKEQFERILGYIRLGQKEGAKLLCGGERLGERGFFIKPTVFGDV 408
Query: 64 EDLAFIARNTL 74
+D IA+ +
Sbjct: 409 QDGMRIAKEEI 419
>sp|P41751|ALDH_ASPNG Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1
Length = 497
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 6 KIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
K+GD D+F G + + FDRI YI+H K + +GG ++ G
Sbjct: 327 KVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATVAVGGERHGTEG 375
>sp|B7GFV3|ROCA_ANOFW 1-pyrroline-5-carboxylate dehydrogenase OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=rocA PE=3 SV=1
Length = 515
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ +LK+G+ E +F G VID+ A+++I YI+ K L + GG D +G
Sbjct: 343 LTKQLKVGNPEEQSTFMGPVIDQSAYNKIMEYIEIGKQEGKL-MTGGEGDDSKG 395
>sp|C6DD82|ABDH_PECCP Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=prr PE=3
SV=1
Length = 474
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVK 58
LK+GD + G +I ++ +R+ G+++ AK+ P++ ++ G GERVK
Sbjct: 307 LKMGDPHDETTELGPLITEQQLERVVGFVERAKALPHITVVTG------GERVK 354
>sp|Q6D6Y7|ABDH_ERWCT Gamma-aminobutyraldehyde dehydrogenase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=prr
PE=3 SV=1
Length = 474
Score = 35.8 bits (81), Expect = 0.084, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVK 58
LKIGD + G +I + +R+ G+++ AK+ P++ ++ G GERVK
Sbjct: 307 LKIGDPRDETTELGPLITEPQLERVMGFVERAKALPHITVVTG------GERVK 354
>sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1
PE=2 SV=1
Length = 517
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 6 KIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
K+G+ D+ G +DK+ F+R+ GYI+ + + GG ++ ERG +K +
Sbjct: 347 KVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPT 401
>sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1
PE=1 SV=3
Length = 517
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 6 KIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
K+G+ D+ G +DK+ F+R+ GYI+ + + GG ++ ERG +K +
Sbjct: 347 KVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPT 401
>sp|P42041|ALDH_ALTAL Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2
Length = 497
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 7 IGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+GD D+F G + + FDRI GYI+ K S GG + ++G
Sbjct: 327 VGDPFAADTFQGPQVSQLQFDRIMGYIEEGKKSGATIETGGNRKGDKG 374
>sp|Q9K9B2|ROCA1_BACHD 1-pyrroline-5-carboxylate dehydrogenase 1 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=rocA1 PE=1 SV=1
Length = 515
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51
L +GD D++ G VID+KAF++I YI+ K L + GG+ D
Sbjct: 347 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRL--MTGGEGD 391
>sp|O14293|YF19_SCHPO Putative aldehyde dehydrogenase-like protein C9E9.09c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC9E9.09c PE=1 SV=1
Length = 503
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKE---SS 61
LK+GD D+F GA + K+ ++RI YI+ + IGG ++ G V+ S+
Sbjct: 331 LKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGAKLEIGGKRHGNLGYFVEPTILSN 390
Query: 62 DLEDLA 67
ED+A
Sbjct: 391 VTEDMA 396
>sp|P08157|ALDH_EMENI Aldehyde dehydrogenase OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=aldA PE=3
SV=2
Length = 497
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
K K+G+ D+F G + + FDRI YI H K + GG ++ G
Sbjct: 324 KNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDRHGNEG 374
>sp|A8GHZ8|ABDH_SERP5 Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans
(strain 568) GN=prr PE=3 SV=1
Length = 474
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ 49
LKIG S G +I + +R+ G+++ AK+ P+++++ GG+
Sbjct: 307 LKIGPPIDASSELGPLITAQHLERVVGFVERAKALPHVQVVTGGE 351
>sp|Q6G6C0|ROCA_STAAS 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q65NN2|ROCA_BACLD 1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=rocA PE=1 SV=1
Length = 516
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 6 KIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLED 65
K+G+ + D + G VID+ +F++I YI+ K L + GG+ D+ E + D
Sbjct: 349 KVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRL--VSGGKGDDSKGYFIEPTIFAD 406
Query: 66 LAFIAR 71
L AR
Sbjct: 407 LDPKAR 412
>sp|Q8NUR2|ROCA_STAAW 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|A8Z3F5|ROCA_STAAT 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q6GDP4|ROCA_STAAR 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|P99076|ROCA_STAAN 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=rocA PE=1 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|P63939|ROCA_STAAM 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=rocA PE=1 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|A6QK44|ROCA_STAAE 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain Newman) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q5HCZ6|ROCA_STAAC 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q2YWA6|ROCA_STAAB 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|A5IVY0|ROCA_STAA9 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain JH9) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q2FV67|ROCA_STAA8 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain NCTC 8325) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q2FDV3|ROCA_STAA3 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain USA300) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|A6U4T5|ROCA_STAA2 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain JH1) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|A7X6R7|ROCA_STAA1 1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=rocA PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES 60
+++ G VI+KK FD+I YI+ K LE GGG D +G V+ +
Sbjct: 355 NTYMGPVINKKQFDKIKNYIEIGKEEGKLE-QGGGTDDSKGYFVEPT 400
>sp|Q7MF13|BETB_VIBVY Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016)
GN=betB PE=3 SV=1
Length = 486
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+KL +GD ++ G++I K +++ G I AK S + GG Q ERG
Sbjct: 306 EKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGATLLTGGFQVTERG 357
>sp|Q8D3K3|BETB_VIBVU Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain CMCP6)
GN=betB PE=3 SV=1
Length = 486
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+KL +GD ++ G++I K +++ G I AK S + GG Q ERG
Sbjct: 306 EKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGATLLTGGFQVTERG 357
>sp|C5D4J5|ROCA_GEOSW 1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus sp. (strain
WCH70) GN=rocA PE=3 SV=1
Length = 515
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ +LK+GD +F G VID+ A+++I YI+ K L + GG D +G
Sbjct: 343 LTKQLKVGDPADQSTFMGPVIDQSAYNKIMEYIEIGKKEGRL-MTGGEGDDSKG 395
>sp|A6W2P7|BETB_MARMS Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1)
GN=betB PE=3 SV=1
Length = 485
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ + IGD D+ GA+I K ++ GYI+ AK + + GG Q E G
Sbjct: 306 EAMIIGDPMDMDTQVGALISKDHMQKVLGYIQAAKDAGATLLCGGYQVTENG 357
>sp|Q9K5Z5|ROCA2_BACHD 1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=rocA2 PE=3 SV=1
Length = 515
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ +L +G+ D + G V+D+ AF +I YI+ K L ++GG D +G
Sbjct: 343 LTKQLSVGEPTAPDVYMGPVVDQGAFSKIMSYIEVGKEEGRL-MVGGEGDDSKG 395
>sp|Q5R8A4|AL9A1_PONAB 4-trimethylaminobutyraldehyde dehydrogenase OS=Pongo abelii
GN=ALDH9A1 PE=2 SV=2
Length = 494
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKE 59
++KIGD D+ G +I++ +R+ G++K AK + GG Y ++K+
Sbjct: 314 RIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD 369
>sp|P49189|AL9A1_HUMAN 4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens
GN=ALDH9A1 PE=1 SV=3
Length = 494
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKE 59
++KIGD D+ G +I++ +R+ G++K AK + GG Y ++K+
Sbjct: 314 RIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD 369
>sp|A8F9T1|ROCA_BACP2 1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus pumilus (strain
SAFR-032) GN=rocA PE=3 SV=1
Length = 515
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES--SDLE 64
D + G VID+ +FD+IT YI+ K L + GG D G + + +DLE
Sbjct: 356 DVYMGPVIDQASFDKITDYIEVGKQEGRL-VTGGTSDDTEGYFIHPTVFADLE 407
>sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2
SV=1
Length = 521
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 18 GAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKES--SDLEDLAFIARNTL 74
G ID+ F +I GYIK K + GGG +RG ++ + D++D IA+ +
Sbjct: 363 GPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEI 421
>sp|Q5L3K8|ROCA_GEOKA 1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus
(strain HTA426) GN=rocA PE=3 SV=1
Length = 515
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1 MLDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERG 54
+ +L +GD +F G VID+ A+++I YI+ K L + GG D +G
Sbjct: 343 LTKQLNVGDPAEQATFMGPVIDQNAYNKIMEYIEIGKQEGRL-MTGGEGDDAKG 395
>sp|Q967D7|TUTL_DROME Protein turtle OS=Drosophila melanogaster GN=tutl PE=2 SV=2
Length = 1531
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIAR 71
V+D + ++ GY + S N++++ GG ++ R V + S +D F++R
Sbjct: 1020 VLDVEGVSKL-GYSQQTLESGNVDVVDGGLFERRNSNVSQKSSSDDGGFLSR 1070
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,827,218
Number of Sequences: 539616
Number of extensions: 1093460
Number of successful extensions: 2236
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2146
Number of HSP's gapped (non-prelim): 100
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)