Query psy1962
Match_columns 79
No_of_seqs 172 out of 1518
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 20:43:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1962.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1962hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2450|consensus 99.7 7.9E-17 1.7E-21 114.4 6.7 70 4-74 329-398 (501)
2 PRK11241 gabD succinate-semial 99.6 2.1E-15 4.5E-20 107.7 7.2 70 2-72 313-382 (482)
3 cd07140 ALDH_F1L_FTFDH 10-form 99.6 1.9E-15 4.2E-20 107.9 6.8 71 2-73 315-385 (486)
4 TIGR01780 SSADH succinate-semi 99.6 4.1E-15 8.8E-20 105.0 7.0 71 2-73 285-355 (448)
5 KOG2451|consensus 99.6 4E-15 8.8E-20 103.7 6.0 71 2-73 329-400 (503)
6 cd07123 ALDH_F4-17_P5CDH Delta 99.6 8.1E-15 1.8E-19 105.4 7.1 72 2-73 342-413 (522)
7 PLN02766 coniferyl-aldehyde de 99.6 9.7E-15 2.1E-19 104.6 7.1 71 2-73 326-396 (501)
8 TIGR01236 D1pyr5carbox1 delta- 99.5 1.6E-14 3.4E-19 104.3 7.0 72 2-73 342-414 (533)
9 cd07141 ALDH_F1AB_F2_RALDH1 NA 99.5 1.9E-14 4.1E-19 102.5 7.1 71 2-73 313-383 (481)
10 PLN02419 methylmalonate-semial 99.5 1.8E-14 4E-19 105.3 6.9 71 2-73 414-488 (604)
11 cd07113 ALDH_PADH_NahF Escheri 99.5 2.5E-14 5.4E-19 101.8 7.1 70 2-72 308-377 (477)
12 PRK09406 gabD1 succinic semial 99.5 2.4E-14 5.1E-19 101.6 6.9 70 2-72 289-358 (457)
13 PRK10090 aldehyde dehydrogenas 99.5 3E-14 6.5E-19 100.0 6.8 71 2-73 238-309 (409)
14 TIGR03374 ABALDH 1-pyrroline d 99.5 3.6E-14 7.9E-19 101.0 7.1 71 2-73 303-374 (472)
15 COG1012 PutA NAD-dependent ald 99.5 4.1E-14 9E-19 101.0 7.4 67 4-73 302-368 (472)
16 TIGR03216 OH_muco_semi_DH 2-hy 99.5 4.6E-14 9.9E-19 100.5 7.0 71 2-73 307-382 (481)
17 cd07106 ALDH_AldA-AAD23400 Str 99.5 6.1E-14 1.3E-18 98.9 7.0 70 2-72 279-348 (446)
18 cd07559 ALDH_ACDHII_AcoD-like 99.5 6.1E-14 1.3E-18 100.0 7.0 70 2-72 307-380 (480)
19 PLN02278 succinic semialdehyde 99.5 6.5E-14 1.4E-18 100.3 7.1 71 2-73 327-397 (498)
20 PLN02466 aldehyde dehydrogenas 99.5 6.1E-14 1.3E-18 101.4 7.0 70 3-73 364-433 (538)
21 cd07099 ALDH_DDALDH Methylomon 99.5 7.4E-14 1.6E-18 98.5 6.9 71 2-73 284-354 (453)
22 cd07142 ALDH_F2BC Arabidosis a 99.5 7.2E-14 1.6E-18 99.4 6.8 70 3-73 310-379 (476)
23 TIGR02278 PaaN-DH phenylacetic 99.5 6E-14 1.3E-18 103.4 6.5 68 2-71 316-383 (663)
24 PRK13473 gamma-aminobutyraldeh 99.5 7.8E-14 1.7E-18 99.1 6.9 70 2-72 304-374 (475)
25 cd07085 ALDH_F6_MMSDH Methylma 99.5 8.8E-14 1.9E-18 98.9 6.8 71 2-73 302-376 (478)
26 PRK13968 putative succinate se 99.5 1.1E-13 2.3E-18 98.4 7.0 70 2-72 292-361 (462)
27 cd07130 ALDH_F7_AASADH NAD+-de 99.5 1.2E-13 2.5E-18 98.4 7.1 69 2-72 302-370 (474)
28 cd07097 ALDH_KGSADH-YcbD Bacil 99.5 1.4E-13 3E-18 97.8 7.0 71 2-73 302-374 (473)
29 cd07117 ALDH_StaphAldA1 Unchar 99.5 1.3E-13 2.9E-18 98.2 6.9 71 2-73 302-376 (475)
30 cd07091 ALDH_F1-2_Ald2-like AL 99.5 1.3E-13 2.9E-18 97.9 6.7 71 2-73 309-379 (476)
31 PLN02315 aldehyde dehydrogenas 99.5 1.4E-13 3E-18 98.9 6.8 70 2-73 324-393 (508)
32 cd07100 ALDH_SSADH1_GabD1 Myco 99.5 1.4E-13 3.1E-18 96.8 6.7 70 2-72 262-331 (429)
33 cd07143 ALDH_AldA_AN0554 Asper 99.5 1.6E-13 3.4E-18 98.0 6.9 71 2-73 312-382 (481)
34 cd07107 ALDH_PhdK-like Nocardi 99.5 1.6E-13 3.4E-18 97.1 6.8 71 2-73 283-357 (456)
35 cd07086 ALDH_F7_AASADH-like NA 99.5 1.8E-13 3.9E-18 97.4 6.8 71 2-73 303-375 (478)
36 cd07110 ALDH_F10_BADH Arabidop 99.5 1.6E-13 3.4E-18 97.1 6.3 70 2-72 287-358 (456)
37 TIGR03250 PhnAcAld_DH putative 99.5 1.7E-13 3.7E-18 97.5 6.5 68 2-73 304-371 (472)
38 PRK13252 betaine aldehyde dehy 99.5 1.9E-13 4E-18 97.6 6.6 71 2-73 308-382 (488)
39 cd07088 ALDH_LactADH-AldA Esch 99.5 2.1E-13 4.6E-18 96.6 6.7 71 2-73 300-371 (468)
40 cd07115 ALDH_HMSADH_HapE Pseud 99.4 2.7E-13 5.8E-18 95.8 7.0 71 2-73 284-354 (453)
41 PLN02174 aldehyde dehydrogenas 99.4 2.4E-13 5.1E-18 97.4 6.7 68 2-73 277-344 (484)
42 TIGR02299 HpaE 5-carboxymethyl 99.4 2.6E-13 5.6E-18 96.8 6.9 70 2-72 302-378 (488)
43 PLN02467 betaine aldehyde dehy 99.4 2.7E-13 5.9E-18 97.3 7.0 71 2-73 318-390 (503)
44 cd07118 ALDH_SNDH Gluconobacte 99.4 3.8E-13 8.3E-18 95.2 7.4 71 2-73 286-357 (454)
45 PRK09407 gabD2 succinic semial 99.4 3.2E-13 6.9E-18 97.2 7.0 71 2-73 319-390 (524)
46 cd07101 ALDH_SSADH2_GabD2 Myco 99.4 3.6E-13 7.9E-18 95.2 7.0 70 2-72 283-353 (454)
47 cd07092 ALDH_ABALDH-YdcW Esche 99.4 4.3E-13 9.3E-18 94.6 7.1 70 2-73 284-353 (450)
48 cd07119 ALDH_BADH-GbsA Bacillu 99.4 4.5E-13 9.8E-18 95.3 7.3 71 2-73 301-375 (482)
49 TIGR01722 MMSDH methylmalonic 99.4 3.8E-13 8.3E-18 95.7 6.8 70 2-72 301-374 (477)
50 cd07089 ALDH_CddD-AldA-like Rh 99.4 4.2E-13 9.1E-18 95.1 6.9 71 2-73 290-362 (459)
51 cd07120 ALDH_PsfA-ACA09737 Pse 99.4 4.4E-13 9.4E-18 95.1 6.7 70 2-72 285-357 (455)
52 cd07112 ALDH_GABALDH-PuuC Esch 99.4 5.4E-13 1.2E-17 94.7 7.0 71 2-73 293-365 (462)
53 cd07139 ALDH_AldA-Rv0768 Mycob 99.4 5.9E-13 1.3E-17 94.5 6.8 71 2-73 303-375 (471)
54 cd07114 ALDH_DhaS Uncharacteri 99.4 6.2E-13 1.4E-17 94.1 6.8 70 3-73 287-360 (457)
55 cd07148 ALDH_RL0313 Uncharacte 99.4 6.9E-13 1.5E-17 94.0 6.9 68 2-72 289-356 (455)
56 cd07131 ALDH_AldH-CAJ73105 Unc 99.4 7.6E-13 1.7E-17 94.0 7.0 70 2-72 302-375 (478)
57 cd07083 ALDH_P5CDH ALDH subfam 99.4 7.9E-13 1.7E-17 94.7 7.1 69 2-72 327-395 (500)
58 cd07111 ALDH_F16 Aldehyde dehy 99.4 7.7E-13 1.7E-17 94.5 7.0 70 2-72 313-382 (480)
59 cd07098 ALDH_F15-22 Aldehyde d 99.4 8.6E-13 1.9E-17 93.5 6.9 71 2-73 290-364 (465)
60 cd07145 ALDH_LactADH_F420-Bios 99.4 6.7E-13 1.5E-17 93.9 6.4 69 2-73 290-358 (456)
61 cd07138 ALDH_CddD_SSP0762 Rhod 99.4 7.7E-13 1.7E-17 93.9 6.5 70 3-73 298-370 (466)
62 cd07108 ALDH_MGR_2402 Magnetos 99.4 1.1E-12 2.5E-17 92.7 7.3 71 2-73 284-359 (457)
63 cd07090 ALDH_F9_TMBADH NAD+-de 99.4 8E-13 1.7E-17 93.5 6.5 71 2-73 282-357 (457)
64 cd07095 ALDH_SGSD_AstD N-succi 99.4 8.2E-13 1.8E-17 93.2 6.5 70 2-73 265-334 (431)
65 TIGR01804 BADH glycine betaine 99.4 1E-12 2.2E-17 93.2 7.0 70 2-72 300-373 (467)
66 PF00171 Aldedh: Aldehyde dehy 99.4 7.6E-13 1.7E-17 93.7 6.4 71 2-73 293-366 (462)
67 cd07102 ALDH_EDX86601 Uncharac 99.4 1.2E-12 2.5E-17 92.5 7.0 71 2-73 282-355 (452)
68 cd07103 ALDH_F5_SSADH_GabD Mit 99.4 1.2E-12 2.6E-17 92.3 6.9 70 3-73 285-354 (451)
69 cd07144 ALDH_ALD2-YMR170C Sacc 99.4 1.8E-12 4E-17 92.3 7.7 68 4-72 314-384 (484)
70 cd07094 ALDH_F21_LactADH-like 99.4 1.3E-12 2.8E-17 92.3 6.7 68 2-73 288-355 (453)
71 cd07124 ALDH_PutA-P5CDH-RocA D 99.4 1.2E-12 2.6E-17 94.0 6.6 70 2-73 339-410 (512)
72 PRK09457 astD succinylglutamic 99.4 1.4E-12 3E-17 93.2 6.8 70 2-73 302-372 (487)
73 TIGR01237 D1pyr5carbox2 delta- 99.4 1.2E-12 2.6E-17 94.0 6.6 69 2-72 340-408 (511)
74 cd07116 ALDH_ACDHII-AcoD Ralst 99.4 1.2E-12 2.7E-17 93.2 6.5 69 2-72 307-379 (479)
75 cd07151 ALDH_HBenzADH NADP+-de 99.4 1.3E-12 2.8E-17 92.7 6.5 68 2-73 298-365 (465)
76 cd07150 ALDH_VaniDH_like Pseud 99.4 1.8E-12 3.9E-17 91.5 6.7 66 3-72 287-352 (451)
77 PRK11563 bifunctional aldehyde 99.4 1.7E-12 3.7E-17 95.9 6.6 65 2-68 320-391 (675)
78 cd07146 ALDH_PhpJ Streptomyces 99.4 2.2E-12 4.8E-17 91.4 6.7 67 2-72 285-351 (451)
79 cd07152 ALDH_BenzADH NAD-depen 99.4 1.9E-12 4.2E-17 91.3 6.4 67 2-72 277-343 (443)
80 KOG2455|consensus 99.4 1.6E-12 3.5E-17 91.9 5.8 69 3-71 370-439 (561)
81 cd07128 ALDH_MaoC-N N-terminal 99.3 2.9E-12 6.3E-17 92.3 6.4 66 2-69 316-388 (513)
82 cd07147 ALDH_F21_RNP123 Aldehy 99.3 3.7E-12 8E-17 90.0 6.5 67 3-73 288-354 (452)
83 PRK03137 1-pyrroline-5-carboxy 99.3 4.6E-12 9.9E-17 91.1 6.8 68 2-72 344-411 (514)
84 PRK09847 gamma-glutamyl-gamma- 99.3 6.4E-12 1.4E-16 90.0 6.9 69 2-73 326-394 (494)
85 cd07109 ALDH_AAS00426 Uncharac 99.3 5.7E-12 1.2E-16 89.1 6.6 70 2-73 284-356 (454)
86 cd07082 ALDH_F11_NP-GAPDH NADP 99.3 7.7E-12 1.7E-16 88.8 7.0 69 2-73 306-374 (473)
87 cd07104 ALDH_BenzADH-like ALDH 99.3 6.3E-12 1.4E-16 88.1 6.4 67 3-73 267-333 (431)
88 KOG2452|consensus 99.3 2.7E-12 5.8E-17 92.1 4.6 69 2-71 710-778 (881)
89 PLN02203 aldehyde dehydrogenas 99.3 6.6E-12 1.4E-16 90.0 6.6 68 2-73 276-343 (484)
90 TIGR03240 arg_catab_astD succi 99.3 8.5E-12 1.8E-16 89.1 7.0 69 2-72 300-369 (484)
91 cd07093 ALDH_F8_HMSADH Human a 99.3 8.6E-12 1.9E-16 88.1 6.9 69 3-72 285-357 (455)
92 cd07149 ALDH_y4uC Uncharacteri 99.3 9.4E-12 2E-16 87.7 6.6 67 2-72 288-354 (453)
93 PLN00412 NADP-dependent glycer 99.3 1.1E-11 2.3E-16 88.9 6.6 67 2-73 322-388 (496)
94 cd07134 ALDH_AlkH-like Pseudom 99.3 1.4E-11 3E-16 87.0 6.7 68 3-72 265-333 (433)
95 cd07137 ALDH_F3FHI Plant aldeh 99.3 1.2E-11 2.6E-16 87.4 6.3 66 3-72 267-332 (432)
96 PRK11903 aldehyde dehydrogenas 99.3 1.3E-11 2.9E-16 89.0 6.5 66 2-69 320-391 (521)
97 KOG2454|consensus 99.2 3.6E-12 7.8E-17 89.5 2.2 71 2-73 358-432 (583)
98 KOG2453|consensus 99.2 2.4E-11 5.3E-16 84.1 6.2 73 3-77 324-396 (507)
99 cd07133 ALDH_CALDH_CalB Conife 99.2 3.2E-11 6.9E-16 85.2 6.5 68 3-73 266-335 (434)
100 cd07125 ALDH_PutA-P5CDH Delta( 99.2 3.8E-11 8.2E-16 86.4 6.5 67 2-72 337-403 (518)
101 cd07135 ALDH_F14-YMR110C Sacch 99.2 3.3E-11 7.1E-16 85.3 5.7 64 3-72 273-336 (436)
102 cd07078 ALDH NAD(P)+ dependent 99.2 7.3E-11 1.6E-15 82.6 7.1 70 2-72 263-333 (432)
103 TIGR01238 D1pyr5carbox3 delta- 99.1 1.2E-10 2.5E-15 83.8 6.3 67 2-71 330-399 (500)
104 PRK11904 bifunctional proline 99.1 1.8E-10 4E-15 88.5 6.6 62 2-65 854-917 (1038)
105 cd07105 ALDH_SaliADH Salicylal 99.1 2.5E-10 5.5E-15 80.4 6.3 65 3-73 269-334 (432)
106 PRK11809 putA trifunctional tr 99.1 2.9E-10 6.4E-15 88.9 6.7 63 2-65 941-1006(1318)
107 cd07136 ALDH_YwdH-P39616 Bacil 99.1 2.9E-10 6.2E-15 80.9 5.8 62 3-72 265-326 (449)
108 PRK11905 bifunctional proline 99.0 9.2E-10 2E-14 85.7 6.3 62 2-64 846-908 (1208)
109 PTZ00381 aldehyde dehydrogenas 99.0 1.6E-09 3.4E-14 77.9 7.1 60 8-72 278-337 (493)
110 cd07132 ALDH_F3AB Aldehyde deh 99.0 1.4E-09 3E-14 77.2 6.3 62 3-72 265-326 (443)
111 cd07087 ALDH_F3-13-14_CALDH-li 98.7 2.7E-08 5.8E-13 70.2 5.7 62 3-72 265-326 (426)
112 cd07127 ALDH_PAD-PaaZ Phenylac 98.7 2.3E-08 5E-13 72.9 5.4 63 3-72 373-439 (549)
113 KOG2456|consensus 98.7 2E-08 4.3E-13 70.9 3.5 60 7-72 272-331 (477)
114 cd07126 ALDH_F12_P5CDH Delta(1 98.6 8.4E-08 1.8E-12 69.1 6.4 63 3-72 308-382 (489)
115 TIGR02288 PaaN_2 phenylacetic 98.6 6.1E-08 1.3E-12 70.8 5.0 64 2-72 372-439 (551)
116 cd07084 ALDH_KGSADH-like ALDH 98.4 3.1E-07 6.7E-12 65.3 4.2 59 3-70 268-332 (442)
117 COG4230 Delta 1-pyrroline-5-ca 98.3 9.9E-07 2.1E-11 64.7 3.7 64 2-67 406-471 (769)
118 cd07129 ALDH_KGSADH Alpha-Keto 97.9 2.7E-05 5.9E-10 55.6 5.9 55 17-72 289-346 (454)
119 TIGR02518 EutH_ACDH acetaldehy 97.7 1.9E-05 4.1E-10 57.0 2.0 46 3-49 279-325 (488)
120 cd07081 ALDH_F20_ACDH_EutE-lik 97.7 3E-05 6.6E-10 55.4 2.5 56 17-73 262-324 (439)
121 cd07121 ALDH_EutE Ethanolamine 97.1 0.00027 5.8E-09 50.4 1.9 56 18-73 265-327 (429)
122 PRK15398 aldehyde dehydrogenas 96.5 0.0022 4.8E-08 46.2 2.7 54 18-72 297-356 (465)
123 PRK13805 bifunctional acetalde 95.5 0.0071 1.5E-07 46.5 1.6 56 17-73 275-340 (862)
124 KOG2449|consensus 95.0 0.047 1E-06 34.0 3.8 61 3-72 20-80 (157)
125 cd07122 ALDH_F20_ACDH Coenzyme 93.6 0.021 4.6E-07 41.0 0.1 42 6-48 273-315 (436)
126 PF08846 DUF1816: Domain of un 62.6 12 0.00026 20.4 2.7 28 17-45 25-53 (68)
127 TIGR01358 DAHP_synth_II 3-deox 49.7 38 0.00082 24.9 4.2 35 16-51 32-66 (443)
128 COG1105 FruK Fructose-1-phosph 48.4 45 0.00097 23.4 4.3 32 17-49 107-138 (310)
129 PLN02291 phospho-2-dehydro-3-d 47.5 44 0.00095 24.8 4.3 35 16-51 51-85 (474)
130 PF01474 DAHP_synth_2: Class-I 44.5 40 0.00086 24.8 3.7 35 16-51 33-67 (439)
131 PF01383 CpcD: CpcD/allophycoc 39.6 57 0.0012 16.8 3.0 19 26-45 33-51 (56)
132 PF07508 Recombinase: Recombin 39.4 31 0.00068 19.0 2.1 19 16-34 82-100 (102)
133 TIGR02117 chp_urease_rgn conse 36.0 1.1E+02 0.0024 20.1 4.5 19 20-38 127-145 (208)
134 KOG1757|consensus 32.3 14 0.00031 22.2 -0.1 9 70-78 83-91 (131)
135 PF09601 DUF2459: Protein of u 31.5 1.4E+02 0.003 18.9 4.8 21 18-38 95-115 (173)
136 cd07079 ALDH_F18-19_ProA-GPR G 30.7 51 0.0011 23.5 2.4 44 20-72 258-302 (406)
137 TIGR02530 flg_new flagellar op 30.3 85 0.0018 18.3 2.9 23 20-43 31-53 (96)
138 KOG0805|consensus 29.6 2E+02 0.0043 20.1 5.2 24 22-46 32-55 (337)
139 PHA02415 DNA primase domain-co 28.9 57 0.0012 26.2 2.5 27 16-43 476-502 (930)
140 cd07972 OBF_DNA_ligase_Arch_Li 27.7 1.3E+02 0.0027 17.7 3.5 41 21-72 46-86 (122)
141 COG5007 Predicted transcriptio 27.1 1.3E+02 0.0027 17.0 3.2 43 27-76 4-46 (80)
142 PF13119 DUF3973: Domain of un 26.2 31 0.00066 16.9 0.5 18 53-70 22-39 (41)
143 PF08625 Utp13: Utp13 specific 26.0 68 0.0015 19.7 2.1 16 21-36 115-130 (141)
144 cd08577 PI-PLCc_GDPD_SF_unchar 24.6 1.7E+02 0.0036 19.3 3.9 25 21-46 179-203 (228)
145 PF11464 Rbsn: Rabenosyn Rab b 24.0 1.1E+02 0.0023 15.1 2.6 16 24-39 3-18 (42)
146 PF07090 DUF1355: Protein of u 23.5 1.2E+02 0.0025 19.5 2.9 25 22-50 87-111 (177)
147 COG2240 PdxK Pyridoxal/pyridox 23.3 2.6E+02 0.0057 19.4 5.0 46 17-62 79-125 (281)
148 PF11294 DUF3095: Protein of u 22.1 1.4E+02 0.0029 21.6 3.3 28 21-50 308-335 (373)
149 cd07574 nitrilase_Rim1_like Un 21.7 1.4E+02 0.0031 19.5 3.2 23 23-46 17-39 (280)
150 cd07570 GAT_Gln-NAD-synth Glut 20.6 1.6E+02 0.0035 19.0 3.2 23 23-46 15-37 (261)
151 KOG2756|consensus 20.3 2E+02 0.0043 20.4 3.6 33 18-50 219-252 (349)
152 cd07569 DCase N-carbamyl-D-ami 20.2 1.7E+02 0.0037 19.6 3.4 23 23-46 21-43 (302)
No 1
>KOG2450|consensus
Probab=99.68 E-value=7.9e-17 Score=114.44 Aligned_cols=70 Identities=23% Similarity=0.303 Sum_probs=65.0
Q ss_pred ceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhcc
Q psy1962 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNTL 74 (79)
Q Consensus 4 ~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~~ 74 (79)
++++|||.++.++.||+||+.|++||.+||+.++++ ||++++||......||||.||||.+|.++||+-.
T Consensus 329 ~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~e-Ga~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~ 398 (501)
T KOG2450|consen 329 KLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKE-GATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAK 398 (501)
T ss_pred ccccCCCCCcccccccccCHHHHHHHHHHHHHHHhc-CCEEEecCcccCCCceEECCeeccCCChhhhhhH
Confidence 489999999999999999999999999999999999 8999999976556899999999999999999753
No 2
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.61 E-value=2.1e-15 Score=107.67 Aligned_cols=70 Identities=27% Similarity=0.342 Sum_probs=62.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||...+.+|+|++||||.+++++|+.
T Consensus 313 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i 382 (482)
T PRK11241 313 VSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEK-GARVVCGGKAHELGGNFFQPTILVDVPANAKV 382 (482)
T ss_pred HhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhC-CCEEEecCCCCCCCCeEEeeEEEECCCCCChh
Confidence 45789999999999999999999999999999999988 89999998654336899999999999999875
No 3
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.60 E-value=1.9e-15 Score=107.88 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=63.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.++|++++++ |+++++||...+..|+|++||||++++++|+..
T Consensus 315 ~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~ 385 (486)
T cd07140 315 VKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKE-GATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIA 385 (486)
T ss_pred HHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCeeECCEEEeCCCCCChhh
Confidence 46789999999999999999999999999999999998 899999986533468999999999999998753
No 4
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.59 E-value=4.1e-15 Score=105.03 Aligned_cols=71 Identities=23% Similarity=0.320 Sum_probs=63.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||++.|++++.+++++++++ |+++++||...+..|+|++||||.+++++|+..
T Consensus 285 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~ 355 (448)
T TIGR01780 285 VKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEK-GAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVA 355 (448)
T ss_pred HHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeeEcCEEEecCCCCChHh
Confidence 46788999999999999999999999999999999998 899999996544468999999999999998764
No 5
>KOG2451|consensus
Probab=99.57 E-value=4e-15 Score=103.72 Aligned_cols=71 Identities=27% Similarity=0.360 Sum_probs=64.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcc-cCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQY-DERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~-~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++||.+++++..||+||++++++++.++++|.++ |++|++||+. .+...+|++|||+.+|+++|..+
T Consensus 329 vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsK-ga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s 400 (503)
T KOG2451|consen 329 VKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSK-GAKIILGGKERSELGPTFYEPTVLSNVTQNMLVS 400 (503)
T ss_pred HHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhc-CCeEEeCCeEccccCCccccceEeecCCccceee
Confidence 57899999999999999999999999999999999998 8999999974 33455999999999999999875
No 6
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.57 E-value=8.1e-15 Score=105.42 Aligned_cols=72 Identities=44% Similarity=0.666 Sum_probs=62.9
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.++++++.+++|+++++||..+...|+|++||||++++++|+..
T Consensus 342 ~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~ 413 (522)
T cd07123 342 LKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM 413 (522)
T ss_pred HhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhh
Confidence 457899999999999999999999999999999998863689999986543458999999999999998864
No 7
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.56 E-value=9.7e-15 Score=104.61 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=63.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.++|++++++ |+++++||...+..|+|++|||+.+++++|+..
T Consensus 326 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 396 (501)
T PLN02766 326 AKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKRE-GATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIA 396 (501)
T ss_pred HHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 35688999999999999999999999999999999988 899999986543468999999999999998753
No 8
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.54 E-value=1.6e-14 Score=104.28 Aligned_cols=72 Identities=32% Similarity=0.503 Sum_probs=63.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCC-CcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSP-NLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~-ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.++++++.++| |+++++||......|+|++||||.+++++|++.
T Consensus 342 ~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~ 414 (533)
T TIGR01236 342 LAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLM 414 (533)
T ss_pred HhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 467899999999999999999999999999999999873 379999986543458999999999999998753
No 9
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.54 E-value=1.9e-14 Score=102.45 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||++.|++++.+++++++++ |+++++||...+..|+|++|||+.+++++|+..
T Consensus 313 ~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 383 (481)
T cd07141 313 AKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKE-GAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIA 383 (481)
T ss_pred HHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 35688999999999999999999999999999999987 899999997644468999999999999998653
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.54 E-value=1.8e-14 Score=105.26 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=62.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc----CCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD----ERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~----~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||... ...|+|++||||++++++|++.
T Consensus 414 ~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~-GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~ 488 (604)
T PLN02419 414 AKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD-GAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECY 488 (604)
T ss_pred HHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhc-CCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHH
Confidence 35688999999999999999999999999999999998 89999998642 1358999999999999999853
No 11
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.53 E-value=2.5e-14 Score=101.77 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||......|+|++|||+.+++++|+.
T Consensus 308 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~ 377 (477)
T cd07113 308 LSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAE-GDEIVRGGEALAGEGYFVQPTLVLARSADSRL 377 (477)
T ss_pred HHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCeeEeCEEEecCCCCChH
Confidence 35788999999999999999999999999999999988 89999998654345899999999999998865
No 12
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.53 E-value=2.4e-14 Score=101.59 Aligned_cols=70 Identities=17% Similarity=0.264 Sum_probs=62.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||++++++++.++++++.++ |+++++||...+..|+|++|||+.+++++|+.
T Consensus 289 ~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 358 (457)
T PRK09406 289 MAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAA-GATILCGGKRPDGPGWFYPPTVITDITPDMRL 358 (457)
T ss_pred HhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCceEccEEeecCCCCCHH
Confidence 45788999999999999999999999999999999988 89999998754446899999999999998875
No 13
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.52 E-value=3e-14 Score=100.04 Aligned_cols=71 Identities=17% Similarity=0.187 Sum_probs=62.5
Q ss_pred CCceecCCCCCC-CCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYT-DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~-~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|||.++ +++|||||+++|++++++++++++++ |+++++||..++..|+|++|||+++++++|+..
T Consensus 238 ~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~ 309 (409)
T PRK10090 238 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEE-GARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309 (409)
T ss_pred HHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHH
Confidence 356789999987 88999999999999999999999988 899999987544468999999999999998753
No 14
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.52 E-value=3.6e-14 Score=101.03 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=62.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCC-cEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPN-LEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~g-a~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.+++++++++ | +++++||...+..|+|+.|||+.+++++|+..
T Consensus 303 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~ 374 (472)
T TIGR03374 303 VATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL-GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIV 374 (472)
T ss_pred HhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHc-CCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhh
Confidence 46788999999999999999999999999999999988 6 79999986543458999999999999998753
No 15
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.52 E-value=4.1e-14 Score=100.97 Aligned_cols=67 Identities=27% Similarity=0.414 Sum_probs=60.3
Q ss_pred ceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 4 ~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++||+.++.++|||||+++|+++++++|++++++ |+.++.||. ... |+|++||||++++++|++-
T Consensus 302 ~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~-G~~~~~Gg~-~~~-g~~~~PTv~~~v~~~~~i~ 368 (472)
T COG1012 302 SLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAE-GARLLAGGK-RPG-GYFVEPTILEGVTPDMRIA 368 (472)
T ss_pred cCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc-CCEEEeCCc-CCC-CeEECCEEEecCCCCChhh
Confidence 588999889999999999999999999999999998 789998887 323 8999999999999999864
No 16
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.51 E-value=4.6e-14 Score=100.51 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||...+ .+|+|++||||++++++|+.-
T Consensus 307 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 382 (481)
T TIGR03216 307 AESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEE-GATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVV 382 (481)
T ss_pred HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHH
Confidence 35688999999999999999999999999999999998 899999986432 358999999999999998753
No 17
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.50 E-value=6.1e-14 Score=98.92 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=62.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||+|+++|++++.++++++..+ |+++++||...+..|+|++|||+++++++|+.
T Consensus 279 ~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i 348 (446)
T cd07106 279 AKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAK-GAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRI 348 (446)
T ss_pred HHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHH
Confidence 35678999999999999999999999999999999987 89999998754446899999999999999875
No 18
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.50 E-value=6.1e-14 Score=99.96 Aligned_cols=70 Identities=19% Similarity=0.307 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+.
T Consensus 307 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 380 (480)
T cd07559 307 FEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEE-GAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRI 380 (480)
T ss_pred HHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcH
Confidence 45788999999999999999999999999999999998 899999986532 35899999999999988864
No 19
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.50 E-value=6.5e-14 Score=100.29 Aligned_cols=71 Identities=21% Similarity=0.257 Sum_probs=62.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++.|++++.+++++++++ |+++++||...+.+|+|++||||.+++++|+..
T Consensus 327 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~ 397 (498)
T PLN02278 327 VQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSK-GAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIF 397 (498)
T ss_pred HHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCceEeeEEEecCCCCChhh
Confidence 35688999999999999999999999999999999987 899999986543358999999999999998754
No 20
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.50 E-value=6.1e-14 Score=101.36 Aligned_cols=70 Identities=20% Similarity=0.158 Sum_probs=62.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
.++++|+|.+++++|||+|+++|++++++++++++++ |+++++||...+..|+|++|||+.+++++|+..
T Consensus 364 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~-Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~ 433 (538)
T PLN02466 364 LKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVES-GATLECGGDRFGSKGYYIQPTVFSNVQDDMLIA 433 (538)
T ss_pred HhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHC-CCEEEecCCcCCCCceEEEEEEEecCCCCCchh
Confidence 4678999999999999999999999999999999988 899999987544468999999999999998753
No 21
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.49 E-value=7.4e-14 Score=98.50 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=62.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|++++++++.+++++++++ |+++++||......|+|++|||+.+++++|+..
T Consensus 284 ~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~ 354 (453)
T cd07099 284 ARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAK-GAKALTGGARSNGGGPFYEPTVLTDVPHDMDVM 354 (453)
T ss_pred HHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCCcCCCCCeEEecEEEecCCCCCHHH
Confidence 35688999999999999999999999999999999988 899999986543468999999999999998753
No 22
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.49 E-value=7.2e-14 Score=99.39 Aligned_cols=70 Identities=23% Similarity=0.279 Sum_probs=62.6
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++|||+|++++++++.++++++.++ |+++++||......|+|+.|||+.+++++|+..
T Consensus 310 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~ 379 (476)
T cd07142 310 LKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEE-GATLITGGDRIGSKGYYIQPTIFSDVKDDMKIA 379 (476)
T ss_pred HhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhC-CCEEEecCCcCCCCCeeEccEEeecCCCCChhh
Confidence 4678999999999999999999999999999999988 899999987544468999999999999998754
No 23
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.49 E-value=6e-14 Score=103.40 Aligned_cols=68 Identities=15% Similarity=0.063 Sum_probs=60.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIAR 71 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~ 71 (79)
++++++|+|.+++++||||||++|++++++++++++++ |+++++||..+ .+|+|++||||.+++++|.
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~-Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~ 383 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAA-GAEVRLGGPGR-LDGAFFPPTLLLAEDPWAG 383 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEECCCcC-CCCeeEccEEEeeCCcchh
Confidence 45789999999999999999999999999999999988 89999998653 3589999999999988763
No 24
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.49 E-value=7.8e-14 Score=99.08 Aligned_cols=70 Identities=23% Similarity=0.359 Sum_probs=62.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCC-cEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPN-LEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~g-a~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||+++|++++.++++++.++ | +++++||...+..|+|++|||+.+++++++.
T Consensus 304 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 374 (475)
T PRK13473 304 VATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKAL-GHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEI 374 (475)
T ss_pred HHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCeEEEECCCcCCCCceeEcCEEEecCCCCChh
Confidence 35688999999999999999999999999999999987 7 9999999754346899999999999988874
No 25
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.48 E-value=8.8e-14 Score=98.95 Aligned_cols=71 Identities=20% Similarity=0.228 Sum_probs=62.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|+++|++++.++++++.++ |+++++||.... .+|+|++||||++++++|+..
T Consensus 302 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 376 (478)
T cd07085 302 AKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEE-GAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIY 376 (478)
T ss_pred HHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhh
Confidence 35688999999999999999999999999999999998 899999986421 358999999999999988753
No 26
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.48 E-value=1.1e-13 Score=98.41 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+.++++||||+++|++++.++++++..+ |+++++||......|+|++||||.+++++|+.
T Consensus 292 ~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~ 361 (462)
T PRK13968 292 AAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAE-GARLLLGGEKIAGAGNYYAPTVLANVTPEMTA 361 (462)
T ss_pred HhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCceEECCEEEeCCCCCChH
Confidence 45688999999999999999999999999999999998 89999998654335899999999999998865
No 27
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.48 E-value=1.2e-13 Score=98.36 Aligned_cols=69 Identities=25% Similarity=0.265 Sum_probs=60.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|||.++++++||||+++|++++.+++++++++ |+++++||...+.+|+|++||||.++++ |+.
T Consensus 302 ~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i 370 (474)
T cd07130 302 YKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQ-GGTVLFGGKVIDGPGNYVEPTIVEGLSD-API 370 (474)
T ss_pred HhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEECCCcCCCCCeEEccEEEecCCC-CHH
Confidence 35688999999999999999999999999999999998 8999999975434689999999998766 654
No 28
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.47 E-value=1.4e-13 Score=97.83 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++.++|||||+++|++++.+++++++++ |+++++||...+ ..|+|++|||+.+++++++..
T Consensus 302 ~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 374 (473)
T cd07097 302 TKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSE-GAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIA 374 (473)
T ss_pred HHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhh
Confidence 45788999999999999999999999999999999988 899999986532 358999999999999988653
No 29
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.47 E-value=1.3e-13 Score=98.18 Aligned_cols=71 Identities=23% Similarity=0.338 Sum_probs=62.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.+++++++++ |+++++||.... ..|+|++||||.+++++|+..
T Consensus 302 ~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~ 376 (475)
T cd07117 302 FENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEE-GAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVA 376 (475)
T ss_pred HHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhh
Confidence 45688999999999999999999999999999999988 899999986432 358999999999999998653
No 30
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.47 E-value=1.3e-13 Score=97.89 Aligned_cols=71 Identities=23% Similarity=0.360 Sum_probs=63.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|++++++++.+++++++++ |+++++||..+...|+|++|||+.+++++|+..
T Consensus 309 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~ 379 (476)
T cd07091 309 AEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKE-GATLLTGGERHGSKGYFIQPTVFTDVKDDMKIA 379 (476)
T ss_pred HhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCceECcEEecCCCCCChhh
Confidence 35688999999999999999999999999999999987 899999987654568999999999999998654
No 31
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.47 E-value=1.4e-13 Score=98.94 Aligned_cols=70 Identities=19% Similarity=0.183 Sum_probs=61.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||++.+++++.+++++++++ |+++++||...+..|+|++|||+ +++++|+..
T Consensus 324 ~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~ 393 (508)
T PLN02315 324 YKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQ-GGKILTGGSAIESEGNFVQPTIV-EISPDADVV 393 (508)
T ss_pred HHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEECCCcCCCCCeEEecEEE-ecCCCChHH
Confidence 35688999999999999999999999999999999998 89999998754446899999999 599888753
No 32
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.47 E-value=1.4e-13 Score=96.75 Aligned_cols=70 Identities=19% Similarity=0.219 Sum_probs=61.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|+++++++||+|++.+++++.+++++++++ |+++++||...+..|+|++|||+.+++++|+.
T Consensus 262 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~ 331 (429)
T cd07100 262 MAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA-GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPA 331 (429)
T ss_pred HHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHH
Confidence 35678999999999999999999999999999999998 89999998654345899999999999998875
No 33
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.47 E-value=1.6e-13 Score=97.95 Aligned_cols=71 Identities=24% Similarity=0.374 Sum_probs=62.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|+++|++++.+++++++++ |+++++||......|+|++|||+.+++++++..
T Consensus 312 ~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 382 (481)
T cd07143 312 AKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAE-GATVETGGKRHGNEGYFIEPTIFTDVTEDMKIV 382 (481)
T ss_pred HHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCCCCCCCceEEeeEEEecCCCCChhh
Confidence 35678999999999999999999999999999999887 899999987544468999999999999998753
No 34
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.46 E-value=1.6e-13 Score=97.10 Aligned_cols=71 Identities=24% Similarity=0.414 Sum_probs=62.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||++.|++++.++++++.++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 283 ~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 357 (456)
T cd07107 283 VAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKRE-GARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIA 357 (456)
T ss_pred HHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHC-CCEEEeCCCccccccCCCCceECCEEEECCCCCChhh
Confidence 35688999999999999999999999999999999987 899999986432 358999999999999998764
No 35
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.46 E-value=1.8e-13 Score=97.41 Aligned_cols=71 Identities=21% Similarity=0.272 Sum_probs=62.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCC--CCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDER--GERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~--~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.+||||+++|++++.+++++++++ |+++++||..... .|+|++|||+++++++|+..
T Consensus 303 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 375 (478)
T cd07086 303 YKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQ-GGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIV 375 (478)
T ss_pred HHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhh
Confidence 35678999999999999999999999999999999988 8999999865432 58999999999999988753
No 36
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.45 E-value=1.6e-13 Score=97.06 Aligned_cols=70 Identities=13% Similarity=0.299 Sum_probs=62.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||++++++++.++++++..+ |+++++||.... ..|+|+.|||+.+++++|+.
T Consensus 287 ~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~-Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i 358 (456)
T cd07110 287 AEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEE-GARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRI 358 (456)
T ss_pred HHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCCcccccCCCCcCCCEEEecCCCCChH
Confidence 35688999999999999999999999999999999987 899999986543 35899999999999999876
No 37
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.45 E-value=1.7e-13 Score=97.49 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=61.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++|||++++|++++.+++++++++ |+++++||.. .|+|++||||++++++|+..
T Consensus 304 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~ 371 (472)
T TIGR03250 304 TRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQ-GARLLLGNVR---DGALYAPTVLDRVDPSMTLV 371 (472)
T ss_pred HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEECCCc---CCEEEcCEEEeCCCCCChHH
Confidence 35678999999999999999999999999999999988 8999998853 48999999999999998764
No 38
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.45 E-value=1.9e-13 Score=97.56 Aligned_cols=71 Identities=17% Similarity=0.274 Sum_probs=61.9
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++++++++++++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 308 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~ 382 (488)
T PRK13252 308 VERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAE-GARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIV 382 (488)
T ss_pred HHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCCcccccccCCCCeEEccEEeccCCCCChHh
Confidence 35688999999999999999999999999999999988 899999985321 358999999999999988753
No 39
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.45 E-value=2.1e-13 Score=96.61 Aligned_cols=71 Identities=17% Similarity=0.285 Sum_probs=62.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.|||+|++++++++.+++++++++ |+++++||...+ ..|+|++|||+.+++++|+..
T Consensus 300 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~ 371 (468)
T cd07088 300 MKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEA-GATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIV 371 (468)
T ss_pred HHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCceeEcCEEEecCCCCCchh
Confidence 35678999999999999999999999999999999988 899999986543 358999999999999998753
No 40
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.45 E-value=2.7e-13 Score=95.82 Aligned_cols=71 Identities=17% Similarity=0.279 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++++++++.+++++++++ |+++++||..+...|+|++|||+.+++++|+..
T Consensus 284 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 354 (453)
T cd07115 284 ARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREE-GARLLTGGKRPGARGFFVEPTIFAAVPPEMRIA 354 (453)
T ss_pred HhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCceECCEEEecCCCCChHh
Confidence 35688999999999999999999999999999999987 799999886543358999999999999887653
No 41
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.45 E-value=2.4e-13 Score=97.41 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=58.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+ +++||||||++|++++.++|+++ .+ |+++++||..+ ..|+|++|||+.+++++|+..
T Consensus 277 ~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~-ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~ 344 (484)
T PLN02174 277 LETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EV-SDKIVYGGEKD-RENLKIAPTILLDVPLDSLIM 344 (484)
T ss_pred HHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-Hc-CCEEEECCCcC-CCCCEEEEEEEecCCCCChhh
Confidence 35678899987 78899999999999999999997 55 78999998653 358999999999999998763
No 42
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.44 E-value=2.6e-13 Score=96.76 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=61.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-------CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-------RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-------~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+++++||.... .+|+|++|||+.+++++|+.
T Consensus 302 ~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i 378 (488)
T TIGR02299 302 VRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKE-GATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRI 378 (488)
T ss_pred HhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCch
Confidence 45788999999999999999999999999999999987 899999986432 24899999999999988864
No 43
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.44 E-value=2.7e-13 Score=97.28 Aligned_cols=71 Identities=21% Similarity=0.296 Sum_probs=62.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|||.++++++||||++.+++++.+++++++.+ |+++++||...+ ..|+|++||||.+++++|+..
T Consensus 318 ~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~-Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~ 390 (503)
T PLN02467 318 AKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE-GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIW 390 (503)
T ss_pred HHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHh
Confidence 35688999999999999999999999999999999998 899999986432 358999999999999988754
No 44
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.44 E-value=3.8e-13 Score=95.24 Aligned_cols=71 Identities=17% Similarity=0.285 Sum_probs=62.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|+++|++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 286 ~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~ 357 (454)
T cd07118 286 SRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAE-GATLLLGGERLASAAGLFYQPTIFTDVTPDMAIA 357 (454)
T ss_pred HHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHH
Confidence 35688999999999999999999999999999999987 899999987543 368999999999999998753
No 45
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.44 E-value=3.2e-13 Score=97.24 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=61.9
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.+++++++++ |+++++||.... ..|+|++|||+++++++|+..
T Consensus 319 ~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~ 390 (524)
T PRK09407 319 VRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAK-GATVLAGGKARPDLGPLFYEPTVLTGVTPDMELA 390 (524)
T ss_pred HHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCCceEeCEEEeCCCCCChHH
Confidence 35688999999999999999999999999999999988 899999986432 257999999999999988753
No 46
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.44 E-value=3.6e-13 Score=95.24 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=61.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++|||||++|++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+.
T Consensus 283 ~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~-Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~ 353 (454)
T cd07101 283 TRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAK-GATVLAGGRARPDLGPYFYEPTVLTGVTEDMEL 353 (454)
T ss_pred HhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHH
Confidence 35688999999999999999999999999999999987 899999886422 35799999999999998875
No 47
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.43 E-value=4.3e-13 Score=94.58 Aligned_cols=70 Identities=17% Similarity=0.325 Sum_probs=61.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++++++++.++++++. + |+++++||...+..|+|++|||+.+++.+|+.-
T Consensus 284 ~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 353 (450)
T cd07092 284 VSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-A-HARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIV 353 (450)
T ss_pred HhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-c-CCEEEeCCCCCCCCccEEeeEEEEcCCCCChHH
Confidence 356789999999999999999999999999999998 6 799999987544468999999999999888753
No 48
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.43 E-value=4.5e-13 Score=95.34 Aligned_cols=71 Identities=18% Similarity=0.308 Sum_probs=61.9
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 301 ~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~ 375 (482)
T cd07119 301 AKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEE-GARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIV 375 (482)
T ss_pred HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCcccccccCCCCceECCEEEecCCCCChHh
Confidence 35688999999999999999999999999999999987 899999986432 258999999999999998753
No 49
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.43 E-value=3.8e-13 Score=95.73 Aligned_cols=70 Identities=19% Similarity=0.241 Sum_probs=61.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc--C--CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD--E--RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~--~--~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||++++++++.+++++++++ |+++++||... + .+|+|++|||+.+++++|..
T Consensus 301 ~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~-Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 374 (477)
T TIGR01722 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAE-GAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKA 374 (477)
T ss_pred HhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChh
Confidence 45789999999999999999999999999999999998 89999998642 1 35899999999999998865
No 50
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.43 E-value=4.2e-13 Score=95.15 Aligned_cols=71 Identities=21% Similarity=0.344 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|++.+++++.+++++++++ |+++++||.... ..|+|++|||+++++++|+..
T Consensus 290 ~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~-Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 362 (459)
T cd07089 290 FEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDE-GARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIA 362 (459)
T ss_pred HHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHH
Confidence 35688999999999999999999999999999999987 899999986543 368999999999999988653
No 51
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.42 E-value=4.4e-13 Score=95.13 Aligned_cols=70 Identities=21% Similarity=0.153 Sum_probs=60.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++++++++++++++.++ |++++++|.... .+|+|++|||+.+++++|+.
T Consensus 285 ~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i 357 (455)
T cd07120 285 LAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAA-GAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI 357 (455)
T ss_pred HHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHC-CCEEEeCCccCcccCCCCceECCEEEecCCCCChh
Confidence 35688999999999999999999999999999999987 899998764322 25899999999999998865
No 52
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.42 E-value=5.4e-13 Score=94.67 Aligned_cols=71 Identities=23% Similarity=0.348 Sum_probs=61.9
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|++.|++++.+++++++++ |+++++||.... ..|+|+.|||+.+++++++..
T Consensus 293 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~-Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 365 (462)
T cd07112 293 AREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAE-GARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIA 365 (462)
T ss_pred HhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHH
Confidence 35688999999999999999999999999999999987 899999886432 258999999999999988753
No 53
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.41 E-value=5.9e-13 Score=94.46 Aligned_cols=71 Identities=20% Similarity=0.318 Sum_probs=62.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||++++++++.+++++++++ |+++++||.... ..|+|++|||+.+++++++..
T Consensus 303 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~ 375 (471)
T cd07139 303 VAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAE-GARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIA 375 (471)
T ss_pred HHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHH
Confidence 35678999999999999999999999999999999988 899999986533 358999999999999998754
No 54
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.41 E-value=6.2e-13 Score=94.05 Aligned_cols=70 Identities=16% Similarity=0.329 Sum_probs=61.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++|||||++++++++.+++++++++ |+++++||.... ..|+|++|||++++++++...
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 360 (457)
T cd07114 287 RAIRVGDPLDPETQMGPLATERQLEKVERYVARAREE-GARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIA 360 (457)
T ss_pred HhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhh
Confidence 4678999999999999999999999999999999987 799999886432 258999999999999887643
No 55
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.41 E-value=6.9e-13 Score=93.96 Aligned_cols=68 Identities=22% Similarity=0.337 Sum_probs=61.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||++++++++.+++++++++ |+++++||... .|+|++|||+++++++|+.
T Consensus 289 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~ 356 (455)
T cd07148 289 AEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAA-GARLLCGGKRL--SDTTYAPTVLLDPPRDAKV 356 (455)
T ss_pred HhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCccC--CCCeEcCEEEeCCCCCCHH
Confidence 35688999999999999999999999999999999998 89999998653 3689999999999999875
No 56
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.40 E-value=7.6e-13 Score=94.05 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=61.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||+++|++++.+++++++++ |+++++||.... ..|+|++||||.+++++++.
T Consensus 302 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 375 (478)
T cd07131 302 AKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEE-GATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRI 375 (478)
T ss_pred HHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCccccccCCCCceECCEEEeCCCCCChH
Confidence 35688999999999999999999999999999999998 899999986432 35899999999999998875
No 57
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.40 E-value=7.9e-13 Score=94.68 Aligned_cols=69 Identities=25% Similarity=0.362 Sum_probs=60.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||++++++++.+++++++++ | ++++||...+..|+|+.|||+.+++++|+.
T Consensus 327 ~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 395 (500)
T cd07083 327 AERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNE-G-QLVLGGKRLEGEGYFVAPTVVEEVPPKARI 395 (500)
T ss_pred HHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC-C-EEEeCCCcCCCCCeEEccEEEeCCCCCChH
Confidence 35688999999999999999999999999999999886 5 889988755446899999999999998874
No 58
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.40 E-value=7.7e-13 Score=94.49 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=61.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||+|+++|++++.+++++++++ |++++.||......|+|++|||+.+++++|+.
T Consensus 313 ~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i 382 (480)
T cd07111 313 MSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAE-GADVFQPGADLPSKGPFYPPTLFTNVPPASRI 382 (480)
T ss_pred HHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCeEEeeEEEecCCCCChh
Confidence 35688999999999999999999999999999999988 79999887543346899999999999988864
No 59
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.40 E-value=8.6e-13 Score=93.51 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=61.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||++.+++++.++++++..+ |+++++||.... ..|+|++|||+++++++|+..
T Consensus 290 ~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 364 (465)
T cd07098 290 VQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEK-GARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIA 364 (465)
T ss_pred HHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHH
Confidence 35678999999999999999999999999999999987 899999875421 258999999999999988754
No 60
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.40 E-value=6.7e-13 Score=93.86 Aligned_cols=69 Identities=23% Similarity=0.251 Sum_probs=60.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++.|++++.+++++++++ |+++++||..+ .|+|++|||+++++++|...
T Consensus 290 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~ 358 (456)
T cd07145 290 VKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEK-GGKILYGGKRD--EGSFFPPTVLENDTPDMIVM 358 (456)
T ss_pred HhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCCC--CCeEECCEeecCCCCCChHh
Confidence 35678999999999999999999999999999999988 89999998643 28999999999999888653
No 61
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.40 E-value=7.7e-13 Score=93.85 Aligned_cols=70 Identities=17% Similarity=0.301 Sum_probs=61.2
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|||.++++++||||++++++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 298 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~-Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~ 370 (466)
T cd07138 298 EAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEE-GARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIA 370 (466)
T ss_pred HhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHH
Confidence 4678999999999999999999999999999999987 899999985322 358999999999999888754
No 62
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.39 E-value=1.1e-12 Score=92.74 Aligned_cols=71 Identities=28% Similarity=0.363 Sum_probs=61.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhh-CCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKS-SPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~-~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||++++++++.++++++.+ + |+++++||.... ..|+|++|||+++++++|+..
T Consensus 284 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~-ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 359 (457)
T cd07108 284 LSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTS-GATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLA 359 (457)
T ss_pred HhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCC-CCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhh
Confidence 3567899999999999999999999999999999987 7 799999986531 358999999999999998753
No 63
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.39 E-value=8e-13 Score=93.51 Aligned_cols=71 Identities=24% Similarity=0.331 Sum_probs=61.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++++++++.+++++++++ |+++++||.... ..|+|++|||+++++++|+..
T Consensus 282 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 357 (457)
T cd07090 282 TKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE-GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIV 357 (457)
T ss_pred HHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC-CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHH
Confidence 35678999999999999999999999999999999987 899999986431 258999999999999998653
No 64
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=99.39 E-value=8.2e-13 Score=93.18 Aligned_cols=70 Identities=17% Similarity=0.073 Sum_probs=60.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.|||+++++|++++.+++++++++ |+++++||...+.+|+|++|||+ +++++|++.
T Consensus 265 ~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~-ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~ 334 (431)
T cd07095 265 AKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLAL-GGEPLLAMERLVAGTAFLSPGII-DVTDAADVP 334 (431)
T ss_pred HHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc-CCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHH
Confidence 35688999999989999999999999999999999998 89999988644446899999999 688887753
No 65
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.39 E-value=1e-12 Score=93.25 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=61.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||++.+++++.+++++++++ |+++++||.... ..|+|+.|||+.+++++|+.
T Consensus 300 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 373 (467)
T TIGR01804 300 TKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEE-GATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTI 373 (467)
T ss_pred HHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChH
Confidence 35688999999999999999999999999999999887 899999986432 25899999999999999865
No 66
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.39 E-value=7.6e-13 Score=93.71 Aligned_cols=71 Identities=23% Similarity=0.300 Sum_probs=62.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCC---cccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGG---QYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg---~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++.+++||++++++++++.++++++..+ |+++++|| ......|+|++|||+.+++++|+..
T Consensus 293 ~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 366 (462)
T PF00171_consen 293 VAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAE-GAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIM 366 (462)
T ss_dssp HHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHT-TSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHH
T ss_pred cccccccCCccccccccccccchhhhhccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 35689999999999999999999999999999999998 89999988 2334578999999999999998764
No 67
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.39 E-value=1.2e-12 Score=92.46 Aligned_cols=71 Identities=18% Similarity=0.201 Sum_probs=62.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc---CCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD---ERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~---~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||+|++.+++++.++++++..+ |+++++||... +..|+|++|||+++++++|++.
T Consensus 282 ~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~-ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~ 355 (452)
T cd07102 282 VKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK-GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVM 355 (452)
T ss_pred HHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhh
Confidence 35688999999999999999999999999999999987 89999988642 2358999999999999998764
No 68
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.38 E-value=1.2e-12 Score=92.30 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=61.6
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++||+|++.+++++.+++++++.+ |+++++||......|+|++|||+.++++++..-
T Consensus 285 ~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~-ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~ 354 (451)
T cd07103 285 KKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAK-GAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIM 354 (451)
T ss_pred HhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHH
Confidence 4678999999999999999999999999999999987 899999986544468999999999999887653
No 69
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.38 E-value=1.8e-12 Score=92.35 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=60.1
Q ss_pred ceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEecCCCchhh
Q psy1962 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 4 ~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~v~~~~~~ 72 (79)
.+++|+|.+++++|||||+++|++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|..
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~ 384 (484)
T cd07144 314 NYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKE-GAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRI 384 (484)
T ss_pred hCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCcccCCCCceECCEEEeCCCCCCch
Confidence 378899999999999999999999999999999987 899999886532 35899999999999998864
No 70
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.38 E-value=1.3e-12 Score=92.32 Aligned_cols=68 Identities=24% Similarity=0.394 Sum_probs=60.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.||||+++.+++++.+++++++++ |+++++||.. .|+|++|||+.+++++|+..
T Consensus 288 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~ 355 (453)
T cd07094 288 VKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEA-GARLLCGGER---DGALFKPTVLEDVPRDTKLS 355 (453)
T ss_pred HHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCccC---CCeEEeCEEEeCCCCCChhh
Confidence 35678999999999999999999999999999999998 8999998853 47899999999999998764
No 71
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.38 E-value=1.2e-12 Score=93.99 Aligned_cols=70 Identities=33% Similarity=0.390 Sum_probs=60.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCC--CCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDER--GERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~--~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.++++++.+ |+++++||..... .|+|+.||||++++++|+..
T Consensus 339 ~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~--g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~ 410 (512)
T cd07124 339 TKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS--EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLA 410 (512)
T ss_pred HHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh--CCEEEecCccCCCCCCCceEcCEEEecCCCCChHH
Confidence 3567899999999999999999999999999999986 5799999875432 68999999999999988754
No 72
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.38 E-value=1.4e-12 Score=93.22 Aligned_cols=70 Identities=16% Similarity=0.148 Sum_probs=59.1
Q ss_pred CCceecCCCC-CCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVE-YTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~-~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|. ++.+++||||+++|++++.+++++++++ |+++++||...+.+|+|++|||+ +++++|+..
T Consensus 302 ~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~ 372 (487)
T PRK09457 302 AKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLAL-GGKSLLEMTQLQAGTGLLTPGII-DVTGVAELP 372 (487)
T ss_pred HhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCccCCCCeeEecEEe-ccCCCChHH
Confidence 4578899996 6788999999999999999999999988 79999887543345799999999 688888653
No 73
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.38 E-value=1.2e-12 Score=93.96 Aligned_cols=69 Identities=25% Similarity=0.327 Sum_probs=60.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||+|+++|++++.+++++++++ | ++++||......|+|++||||.+++++|+.
T Consensus 340 ~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~-g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i 408 (511)
T TIGR01237 340 TRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAE-G-ELAIGGCDAPSEGYFIGPTIFKDVDRHARL 408 (511)
T ss_pred HHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-C-cEEECCccCCCCCeEEcCEEEeCCCCCChH
Confidence 35688999999999999999999999999999999887 5 788887644346899999999999999874
No 74
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.38 E-value=1.2e-12 Score=93.19 Aligned_cols=69 Identities=22% Similarity=0.336 Sum_probs=59.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++.+.||||++++|++++.+++++++++ |+++++||.... ..|+|+.||||++++ +|+.
T Consensus 307 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~ 379 (479)
T cd07116 307 VKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEE-GAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRI 379 (479)
T ss_pred HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChh
Confidence 35678999999999999999999999999999999998 899999986432 258999999999875 6654
No 75
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.37 E-value=1.3e-12 Score=92.73 Aligned_cols=68 Identities=22% Similarity=0.312 Sum_probs=60.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.+||||+++|++++.+++++++++ |+++++||.. .|+|++|||+.+++++|+..
T Consensus 298 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~-ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~ 365 (465)
T cd07151 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEE-GATLLVGGEA---EGNVLEPTVLSDVTNDMEIA 365 (465)
T ss_pred HHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CCEEEecCCc---CCEEEccEEEeCCCCCCchh
Confidence 35678999999999999999999999999999999988 8999998853 47999999999999988643
No 76
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.36 E-value=1.8e-12 Score=91.48 Aligned_cols=66 Identities=26% Similarity=0.443 Sum_probs=59.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+++++|||||+++|++++.+++++++.+ |+++++||.. +|+|++||||.+++++|..
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~ 352 (451)
T cd07150 287 SKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAK-GAKLLTGGKY---DGNFYQPTVLTDVTPDMRI 352 (451)
T ss_pred HhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCcc---CCcEEcCEEEeCCCCCCHH
Confidence 5678999999999999999999999999999999988 8999998853 4799999999999998764
No 77
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.36 E-value=1.7e-12 Score=95.88 Aligned_cols=65 Identities=17% Similarity=0.113 Sum_probs=57.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-------CCCCCeEeeeEEecCCC
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-------ERGERVKESSDLEDLAF 68 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-------~~~g~~v~Ptil~~v~~ 68 (79)
++++++|+|.+++++||||||++|++++.+++++++++ +++++||... ...|+|++||||.++++
T Consensus 320 ~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~--a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~ 391 (675)
T PRK11563 320 LAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA--AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDP 391 (675)
T ss_pred HhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC--CEEEECCcccccccCCCCCCCeeECCEEEeccCc
Confidence 46789999999999999999999999999999999975 7999988521 13589999999999988
No 78
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.35 E-value=2.2e-12 Score=91.38 Aligned_cols=67 Identities=21% Similarity=0.193 Sum_probs=60.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||||++.+++++.++++++.++ |+++++||.. .|+|++|||+++++++|+.
T Consensus 285 ~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~-Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~ 351 (451)
T cd07146 285 SAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQ-GARVLLGNQR---QGALYAPTVLDHVPPDAEL 351 (451)
T ss_pred HhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCCc---CCEEEcCEEeecCCCCCHH
Confidence 35678999999999999999999999999999999998 8999998853 4799999999999999865
No 79
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.35 E-value=1.9e-12 Score=91.27 Aligned_cols=67 Identities=16% Similarity=0.286 Sum_probs=60.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++.+|||+++.+++++.++++++.++ |+++++||.. .|+|++|||+.+++++|+.
T Consensus 277 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~ 343 (443)
T cd07152 277 AKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA-GARLEAGGTY---DGLFYRPTVLSGVKPGMPA 343 (443)
T ss_pred HHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CCEEEeccCc---CCEEEcCEEEecCCCCChh
Confidence 35678999999999999999999999999999999988 8999998863 4799999999999998864
No 80
>KOG2455|consensus
Probab=99.35 E-value=1.6e-12 Score=91.94 Aligned_cols=69 Identities=35% Similarity=0.505 Sum_probs=61.8
Q ss_pred CceecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchh
Q psy1962 3 DKLKIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIAR 71 (79)
Q Consensus 3 ~~l~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~ 71 (79)
+++++||| .|..+++|+||+.+.|+|+..+|++|+.....+|++||.+++..|+|+.|||+..-++..+
T Consensus 370 ~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~p 439 (561)
T KOG2455|consen 370 SQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDP 439 (561)
T ss_pred hhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcc
Confidence 56899997 7889999999999999999999999998766789999999988999999999987776654
No 81
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=99.33 E-value=2.9e-12 Score=92.33 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-------CCCCCeEeeeEEecCCCc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-------ERGERVKESSDLEDLAFI 69 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-------~~~g~~v~Ptil~~v~~~ 69 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ +++++||... ...|+|++||||.+++++
T Consensus 316 ~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~--A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~ 388 (513)
T cd07128 316 LAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE--AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPD 388 (513)
T ss_pred HHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC--CEEEECCCccccccCCCCCCCEEECCEEEeccCCc
Confidence 45788999999999999999999999999999999874 8999988542 135899999999988874
No 82
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.33 E-value=3.7e-12 Score=89.99 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=59.9
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++.+|||+++++++++.+++++++++ |+++++||.. .|+|++|||+.+++++|...
T Consensus 288 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~ 354 (452)
T cd07147 288 KALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDA-GAKLLTGGKR---DGALLEPTILEDVPPDMEVN 354 (452)
T ss_pred HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEecCCc---CCEEEcCEEEeCCCCCChHH
Confidence 5678899999999999999999999999999999987 8999998863 47899999999999988754
No 83
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.32 E-value=4.6e-12 Score=91.07 Aligned_cols=68 Identities=26% Similarity=0.433 Sum_probs=59.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++. ++||+|++.|++++.++++++.++ +++++||......|+|++||||.+++++|+.
T Consensus 344 ~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~--~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~ 411 (514)
T PRK03137 344 TKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE--GRLVLGGEGDDSKGYFIQPTIFADVDPKARI 411 (514)
T ss_pred HHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC--CEEEeCCCcCCCCceEEeeEEEeCCCCCCHH
Confidence 3567899999988 899999999999999999999875 5899998654446899999999999998875
No 84
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.31 E-value=6.4e-12 Score=90.00 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++.|||||+++|++++.+++++++++ | ++++||... ..++|++|||+.+++++|+..
T Consensus 326 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~-G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~ 394 (494)
T PRK09847 326 AQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESK-G-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLS 394 (494)
T ss_pred HHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC-C-eEEECCccC-CCCceEeeEEEeCCCCCChHH
Confidence 35678899999999999999999999999999999987 7 888888653 347899999999999988654
No 85
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.31 E-value=5.7e-12 Score=89.13 Aligned_cols=70 Identities=26% Similarity=0.441 Sum_probs=59.7
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+ ++++||+|++++++++.+++++++++ |+++++||.... ..|+|++|||+.+++++|+..
T Consensus 284 ~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~-ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~ 356 (454)
T cd07109 284 FRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARAR-GARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLA 356 (454)
T ss_pred HHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhC-CCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhh
Confidence 45688999986 67899999999999999999999887 899999886432 358999999999999988753
No 86
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.30 E-value=7.7e-12 Score=88.84 Aligned_cols=69 Identities=23% Similarity=0.267 Sum_probs=60.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||+|+++|++++.++++++..+ |+++++||... .|+|+.|||+.+++++++..
T Consensus 306 ~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~-ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~ 374 (473)
T cd07082 306 VAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAK-GATVLNGGGRE--GGNLIYPTLLDPVTPDMRLA 374 (473)
T ss_pred HhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCccC--CCeEEeeEEEecCCCCCHHH
Confidence 35678899999999999999999999999999999987 89999998643 38999999999999988653
No 87
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.30 E-value=6.3e-12 Score=88.14 Aligned_cols=67 Identities=21% Similarity=0.373 Sum_probs=59.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++.+||+|++.+++++.+++++++.+ |+++++||.. .|+|++|||+.+++++|...
T Consensus 267 ~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~-G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~ 333 (431)
T cd07104 267 KALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAA-GARLLTGGTY---EGLFYQPTVLSDVTPDMPIF 333 (431)
T ss_pred HhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHC-CCEEEeCCCC---CCceECCEEeecCCCCChhh
Confidence 4678899999999999999999999999999999987 8999998853 47999999999999887653
No 88
>KOG2452|consensus
Probab=99.30 E-value=2.7e-12 Score=92.11 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=64.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIAR 71 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~ 71 (79)
++++++|||+|.+++-||...-+|+.++.+|++.+.+. ||++.+||+..+..|+|++||||+++++.|-
T Consensus 710 ~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~-ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f 778 (881)
T KOG2452|consen 710 VRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKE-GATLVCGGNQVPRPGFFFEPTVFTDVEDHMF 778 (881)
T ss_pred HHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhcc-CcEEEECCccCCCCCcccCCeeecccchhhh
Confidence 46789999999999999999999999999999999997 8999999998888899999999999987664
No 89
>PLN02203 aldehyde dehydrogenase
Probab=99.30 E-value=6.6e-12 Score=89.98 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=57.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++ ++||||||++|++++.+++++++.+ +++++||..+ ..|+|++||||.+++++|+..
T Consensus 276 ~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~--~~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~ 343 (484)
T PLN02203 276 IKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA--ASIVHGGSID-EKKLFIEPTILLNPPLDSDIM 343 (484)
T ss_pred HHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC--CeEEeCCCcC-CCCCEEeeEEEecCCCCCHHH
Confidence 346789999885 5799999999999999999999874 5788888643 368999999999999998763
No 90
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.30 E-value=8.5e-12 Score=89.07 Aligned_cols=69 Identities=17% Similarity=0.169 Sum_probs=57.8
Q ss_pred CCceecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+| .+++++|||||+++|++++.++++++.++ |++++++|...+..|+|++|||+ +++++|+.
T Consensus 300 ~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i 369 (484)
T TIGR03240 300 AERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLAL-GGKSLLAMRQLDPGAALLTPGII-DVTGVAEL 369 (484)
T ss_pred HHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHH
Confidence 356889997 47788899999999999999999999987 79998887543345789999999 58888764
No 91
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.29 E-value=8.6e-12 Score=88.10 Aligned_cols=69 Identities=28% Similarity=0.449 Sum_probs=60.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.++++++||||++.+++++.+++++++.+ |+++++||.... ..|+|+.|||+++++++++.
T Consensus 285 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~ 357 (455)
T cd07093 285 KALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAE-GATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357 (455)
T ss_pred HhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCCccccccCCCCceECCEEEecCCCCChH
Confidence 5678899999999999999999999999999999887 899999986532 24899999999999988764
No 92
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.28 E-value=9.4e-12 Score=87.73 Aligned_cols=67 Identities=22% Similarity=0.338 Sum_probs=59.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++|||+++.+++++.+++++++.+ |+++++||.. .|+|++|||+.+++++|+.
T Consensus 288 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~ 354 (453)
T cd07149 288 TKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEG-GARLLTGGKR---DGAILEPTVLTDVPPDMKV 354 (453)
T ss_pred HHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHC-CCEEEeCCCC---CCeEEcCEEEeCCCCCCHH
Confidence 35678999999999999999999999999999999987 7999998853 3789999999999988764
No 93
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.28 E-value=1.1e-11 Score=88.90 Aligned_cols=67 Identities=19% Similarity=0.162 Sum_probs=58.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+ +++|||+|++++++++.+++++++.+ |+++++++. ..|+|++||||.+++++|+..
T Consensus 322 ~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~-Ga~~l~~~~---~~g~~~~Ptvl~~v~~~~~i~ 388 (496)
T PLN00412 322 VAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEK-GATFCQEWK---REGNLIWPLLLDNVRPDMRIA 388 (496)
T ss_pred HHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHC-CCEEEecCC---CCCeEEecEEEeCCCCCCHHH
Confidence 35688999987 77899999999999999999999988 899988763 358999999999999998754
No 94
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.27 E-value=1.4e-11 Score=87.02 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=58.4
Q ss_pred CceecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++..|+| .+.++++||||++.|++++.++++++.++ |+++++||..+ ..|+|++|||+.+++++|..
T Consensus 265 ~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~-ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~ 333 (433)
T cd07134 265 EKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAK-GAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKI 333 (433)
T ss_pred HHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhC-CCEEEeCCCcC-CCCCEEeeEEEeCCCCccHH
Confidence 34556776 77888899999999999999999999987 89999998653 35799999999999999875
No 95
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.27 E-value=1.2e-11 Score=87.39 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=56.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|. ++++|||||+++|++++.++++++.. |+++++||..+ .+|+|++|||+.+++++|+.
T Consensus 267 ~~~~~g~p~-~~~~~gpli~~~~~~~v~~~i~~a~~--ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~ 332 (432)
T cd07137 267 EKFFGENPK-ESKDLSRIVNSHHFQRLSRLLDDPSV--ADKIVHGGERD-EKNLYIEPTILLDPPLDSSI 332 (432)
T ss_pred HHHhCCCCC-ccCCcCCcCCHHHHHHHHHHHHHHHh--CCeEEeCCCcC-CCCCEEeeEEEecCCCcchh
Confidence 457789994 58889999999999999999999986 58899988643 35899999999999998875
No 96
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=99.26 E-value=1.3e-11 Score=89.00 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=55.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc------CCCCCeEeeeEEecCCCc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD------ERGERVKESSDLEDLAFI 69 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~------~~~g~~v~Ptil~~v~~~ 69 (79)
++++++|+|.+++++|||||++.|++++.++++.+. + |+++++||... ...|+|++||||++++.+
T Consensus 320 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~-~-ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~ 391 (521)
T PRK11903 320 LAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALR-A-QAEVLFDGGGFALVDADPAVAACVGPTLLGASDPD 391 (521)
T ss_pred HHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHh-c-CCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCC
Confidence 457899999999999999999999999999998654 5 79999998541 124899999999976654
No 97
>KOG2454|consensus
Probab=99.23 E-value=3.6e-12 Score=89.47 Aligned_cols=71 Identities=14% Similarity=0.147 Sum_probs=62.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++.++.|-|.....+||.|++.++|+.+++++++|.++ ||+++.||.+.. ..|.|++||++.|++++|.+-
T Consensus 358 v~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~K-GArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIa 432 (583)
T KOG2454|consen 358 VKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDK-GARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIA 432 (583)
T ss_pred HHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhh-cchhhhcccccCCCCCCcccccCCeEEEecCchhhhH
Confidence 34577898888899999999999999999999999998 899999997532 458999999999999999863
No 98
>KOG2453|consensus
Probab=99.23 E-value=2.4e-11 Score=84.12 Aligned_cols=73 Identities=23% Similarity=0.298 Sum_probs=67.1
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhccccc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNTLRHL 77 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~~~~~ 77 (79)
+++++|+|+|+.+.+||+-++++..+...-++.++++ |++|++||+..+.+|+|+.|||++ ..+|+.+.+|.+
T Consensus 324 aq~~ignpld~ntl~gplht~qav~~f~~~veeak~~-ggki~yggkv~er~gnfveptivt-l~hda~vv~~et 396 (507)
T KOG2453|consen 324 AQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKAS-GGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRET 396 (507)
T ss_pred HheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhc-CCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhh
Confidence 4678999999999999999999999999999999998 789999999888889999999998 899998887754
No 99
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.22 E-value=3.2e-11 Score=85.23 Aligned_cols=68 Identities=13% Similarity=0.146 Sum_probs=56.7
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+ ..++++||+++++|++++.+++++++++ |+++++||.... .+|+|++|||+.+++++|+..
T Consensus 266 ~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~ 335 (434)
T cd07133 266 AKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAK-GARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVM 335 (434)
T ss_pred HHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhC-CCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCccc
Confidence 4566775 3577899999999999999999999988 899999886432 358999999999999988753
No 100
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.21 E-value=3.8e-11 Score=86.44 Aligned_cols=67 Identities=18% Similarity=0.139 Sum_probs=56.3
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||+++++|++++.+++++++.. +++++||..+...|+|++|||+.++ +|+.
T Consensus 337 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~--~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i 403 (518)
T cd07125 337 MASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE--AWLIAPAPLDDGNGYFVAPGIIEIV--GIFD 403 (518)
T ss_pred HhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC--CEEEeCCCcCCCCCeEEccEEEeec--CChH
Confidence 35688999999999999999999999999999999863 6888888653336899999999988 5543
No 101
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.20 E-value=3.3e-11 Score=85.30 Aligned_cols=64 Identities=14% Similarity=0.303 Sum_probs=55.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+| +++++|||+|++++++++.++++++ |+++++||... .+|+|++|||+++++++|+.
T Consensus 273 ~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a----g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~ 336 (436)
T cd07135 273 DEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT----KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSL 336 (436)
T ss_pred HHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc----CCeEEECCCcC-CCCCEEccEEEecCCCccHH
Confidence 46788999 8899999999999999999999876 46899988654 36899999999999998875
No 102
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=99.19 E-value=7.3e-11 Score=82.59 Aligned_cols=70 Identities=24% Similarity=0.324 Sum_probs=60.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCC-CCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDER-GERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~-~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.++++++||++++.+++++.++++++.++ |+++++||..+.. .|+|++|||+.++++++..
T Consensus 263 l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~ 333 (432)
T cd07078 263 VKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAE-GAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPI 333 (432)
T ss_pred HHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCCcEEccEEEecCCCCChh
Confidence 35678899999999999999999999999999999887 7999998865432 4899999999999988754
No 103
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.14 E-value=1.2e-10 Score=83.79 Aligned_cols=67 Identities=18% Similarity=0.115 Sum_probs=54.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc---ccCCCCCeEeeeEEecCCCchh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ---YDERGERVKESSDLEDLAFIAR 71 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~---~~~~~g~~v~Ptil~~v~~~~~ 71 (79)
++++++|+|.+++++|||++++++++++.+++++++++ |++++.++. .....|+|++|||+++ .+|+
T Consensus 330 ~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~ 399 (500)
T TIGR01238 330 MQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQT-QKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIA 399 (500)
T ss_pred HHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEeeccCCCCCCCCCeeEcCEEEcc--CCch
Confidence 35688999999999999999999999999999999987 788774322 1123589999999974 4554
No 104
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.11 E-value=1.8e-10 Score=88.50 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=53.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEec
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLED 65 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~ 65 (79)
++++++|+|.+.+++|||+|++.+++++.++|+++++ |+++++||..++ ..|+|+.|||+..
T Consensus 854 ~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~--ga~vl~gg~~~~~~~~G~fv~PTvi~~ 917 (1038)
T PRK11904 854 MAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR--EARLLAQLPLPAGTENGHFVAPTAFEI 917 (1038)
T ss_pred HHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc--CCEEEeCCCCCCCCCCceEEeeEEEcc
Confidence 4578999999999999999999999999999999875 589999986543 2589999999963
No 105
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.09 E-value=2.5e-10 Score=80.43 Aligned_cols=65 Identities=22% Similarity=0.272 Sum_probs=54.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++| .+++||+|++.|++++.+++++++.+ |+++++||..+. ..|+|+.|||+++++++|+.-
T Consensus 269 ~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~ 334 (432)
T cd07105 269 EKLFAG-----PVVLGSLVSAAAADRVKELVDDALSK-GAKLVVGGLADESPSGTSMPPTILDNVTPDMDIY 334 (432)
T ss_pred HhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHH
Confidence 345666 56799999999999999999999887 899999886542 358999999999999988753
No 106
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.08 E-value=2.9e-10 Score=88.86 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=54.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEec
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLED 65 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~ 65 (79)
++++++|||.+.++++||+|++.+++++.++|++++++ |++++.++.... ..|+|++||||..
T Consensus 941 ~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~-G~~v~~g~~~~~~~~~~G~fv~PTIi~~ 1006 (1318)
T PRK11809 941 MAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAK-GRPVFQAARENSEDWQSGTFVPPTLIEL 1006 (1318)
T ss_pred HHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEecCCCCCCCCCCCeEEeeEEEec
Confidence 45789999999999999999999999999999999987 788888764321 3589999999974
No 107
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.07 E-value=2.9e-10 Score=80.93 Aligned_cols=62 Identities=26% Similarity=0.340 Sum_probs=52.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+ +++|||+||++|++++.+++++ +++++||..+ .+|+|++|||+.+++++|..
T Consensus 265 ~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~------a~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~ 326 (449)
T cd07136 265 KKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN------GKIVFGGNTD-RETLYIEPTILDNVTWDDPV 326 (449)
T ss_pred HHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc------ceEEECCCcC-CCCCEEeeEEEecCCCcChH
Confidence 4677899987 7889999999999999999874 3688888653 35899999999999998864
No 108
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.00 E-value=9.2e-10 Score=85.71 Aligned_cols=62 Identities=23% Similarity=0.208 Sum_probs=52.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEe
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLE 64 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~ 64 (79)
++++++|||.+.+++|||||++.+++++.++|++++++ |+.++.++.... ..|+|+.|||+.
T Consensus 846 ~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~-G~~l~~g~~~~~~~~G~fv~PTVl~ 908 (1208)
T PRK11905 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAA-GRLVHQLPLPAETEKGTFVAPTLIE 908 (1208)
T ss_pred HHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHC-CCEEEEccCCCCCCCCeEEeeEEEe
Confidence 35688999999999999999999999999999999987 777776653222 468999999997
No 109
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=98.99 E-value=1.6e-09 Score=77.94 Aligned_cols=60 Identities=12% Similarity=0.145 Sum_probs=50.5
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 8 GDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 8 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
|++.+++++|||||+++|++++.+++++ + |+++++||..+ ..++|++|||+++++++|+.
T Consensus 278 g~~~~~~~~~gpli~~~~~~ri~~~i~~---~-ga~~~~gG~~~-~~~~~i~Ptvl~~v~~~~~i 337 (493)
T PTZ00381 278 GEDPKKSEDYSRIVNEFHTKRLAELIKD---H-GGKVVYGGEVD-IENKYVAPTIIVNPDLDSPL 337 (493)
T ss_pred CCCCccCCCcCCCCCHHHHHHHHHHHHh---C-CCcEEECCCcC-CCCCeEeeEEEecCCCCChH
Confidence 6666778899999999999999999963 3 67888988653 35789999999999999875
No 110
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=98.98 E-value=1.4e-09 Score=77.19 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=51.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++.|+| +++++|||||+++|++++.++++ ++++++||..+ ..|+|++|||+.+++++|+.
T Consensus 265 ~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~------~a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~ 326 (443)
T cd07132 265 KEFYGEDP-KESPDYGRIINDRHFQRLKKLLS------GGKVAIGGQTD-EKERYIAPTVLTDVKPSDPV 326 (443)
T ss_pred HHhcCCCC-CcccccCCcCCHHHHHHHHHHHh------CCEEEeCCccC-CCCCEEeeEEEeCCCCCChH
Confidence 35667888 67888999999999999999986 24788888653 35899999999999998875
No 111
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=98.73 E-value=2.7e-08 Score=70.23 Aligned_cols=62 Identities=23% Similarity=0.371 Sum_probs=49.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++.|+|. +.+++||+++++|++++.++++++ ++++||..+ ..|+|++|||+.+++++|+.
T Consensus 265 ~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a------~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~ 326 (426)
T cd07087 265 KEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG------KVVIGGQVD-KEERYIAPTILDDVSPDSPL 326 (426)
T ss_pred HHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc------eEEeCCccC-CCCCEEeeEEEecCCCCCHH
Confidence 345555554 688899999999999999998743 688888643 35899999999999998865
No 112
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=98.72 E-value=2.3e-08 Score=72.91 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=47.6
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCC-CeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGE-RVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g-~~v~Ptil~~v~~~~~~ 72 (79)
+++ +|||.+..++||||||+++++|+.+.+ +. |+ +++||..+. ..| +|++||||.+++++|++
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~a~----~~-g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i 439 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAEAR----QL-GE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAA 439 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHHHH----hC-CC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHH
Confidence 456 899999999999999999999996544 43 44 777775431 134 56799999988888765
No 113
>KOG2456|consensus
Probab=98.67 E-value=2e-08 Score=70.91 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=48.8
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 7 IGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 7 ~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+|+...++.+++.|||++||+|+.++++.. .+|+.||..++. ..||+|||+.||++++..
T Consensus 272 YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~-----~kv~~Gg~~d~~-d~~I~PTIL~DV~~~~p~ 331 (477)
T KOG2456|consen 272 YGENPKESKDLSRIINQRHFQRLSALLDET-----GKVAIGGESDES-DRYIAPTILLDVPEDSPV 331 (477)
T ss_pred hCCCccccccHHHHhhHHHHHHHHHHhcCC-----CceecCCccchh-hcccCCeEEecCCCCChh
Confidence 465556788899999999999999998632 579999986643 479999999999988653
No 114
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=98.65 E-value=8.4e-08 Score=69.14 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=47.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhh-CCCcEEEeCCcccCC----CC-CeEeeeEEec------CCCch
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKS-SPNLEIIGGGQYDER----GE-RVKESSDLED------LAFIA 70 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~-~~ga~i~~gg~~~~~----~g-~~v~Ptil~~------v~~~~ 70 (79)
+++++|+ +++|||||+. .+++.++++++++ + |+++++||..++. .+ .|++||||.. ++++|
T Consensus 308 ~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~-Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~ 380 (489)
T cd07126 308 EQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIP-GAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENF 380 (489)
T ss_pred HhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCC-CCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCC
Confidence 3455553 4699999998 9999999999986 7 7999999865332 23 3899999952 45676
Q ss_pred hh
Q psy1962 71 RN 72 (79)
Q Consensus 71 ~~ 72 (79)
+.
T Consensus 381 ~i 382 (489)
T cd07126 381 EL 382 (489)
T ss_pred HH
Confidence 64
No 115
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=98.62 E-value=6.1e-08 Score=70.78 Aligned_cols=64 Identities=23% Similarity=0.231 Sum_probs=45.2
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc---CCCC-CeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD---ERGE-RVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~---~~~g-~~v~Ptil~~v~~~~~~ 72 (79)
++++ +|||.++.+++|||||+++++|| +++.++ | +++++|... ...| +|++|||+.....+|++
T Consensus 372 ~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~-G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i 439 (551)
T TIGR02288 372 IDGL-LGDPARATAVLGAIQSPDTLARI----AEARAL-G-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAA 439 (551)
T ss_pred HHHh-cCCcccccccccCcCCHHHHHHH----HHHHhC-C-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHH
Confidence 3467 89999999999999999999996 445555 5 566665432 1134 68999999533346654
No 116
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=98.42 E-value=3.1e-07 Score=65.26 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=42.8
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC------CCCCeEeeeEEecCCCch
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE------RGERVKESSDLEDLAFIA 70 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~------~~g~~v~Ptil~~v~~~~ 70 (79)
+++++| ++++||+++++.. ++++++.+++|+++++||.... ..|+|++||||.+++++|
T Consensus 268 ~~~~~g-----~~~~gpl~~~~~~----~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~ 332 (442)
T cd07084 268 ARRKLE-----DLLLGPVQTFTTL----AMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEIL 332 (442)
T ss_pred HhcccC-----ccccChhhhHHHH----HHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCccc
Confidence 456676 6679999887555 4555555553489999886421 248999999999999987
No 117
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=98.25 E-value=9.9e-07 Score=64.74 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=50.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-C-CCCCeEeeeEEecCC
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-E-RGERVKESSDLEDLA 67 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-~-~~g~~v~Ptil~~v~ 67 (79)
+..+++|+|..-.+++||+|+..+.+.++++|+..+.. | +.+.--... + .+|.|+.||+|+--+
T Consensus 406 m~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~-g-r~v~q~~~~~~~q~GtFv~Ptl~El~~ 471 (769)
T COG4230 406 MAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSK-G-RLVHQAAAPNSLQKGTFVAPTLIELEN 471 (769)
T ss_pred HHHhccCCccceeccccccccHHHHHHHHHHHHHHHhc-c-cchhhccCCCccCCceeeCceeEEcCC
Confidence 35689999999999999999999999999999999876 3 433322111 1 469999999997544
No 118
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=97.94 E-value=2.7e-05 Score=55.56 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=41.6
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCC---Cchhh
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLA---FIARN 72 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~---~~~~~ 72 (79)
.||++++.+.+++.++++++.++.|+++++||... .+|+|++||||...+ ++|+.
T Consensus 289 ~g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i 346 (454)
T cd07129 289 AQTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPA 346 (454)
T ss_pred CCCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchh
Confidence 46788888888888888888775368999998643 368999999998555 45554
No 119
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=97.71 E-value=1.9e-05 Score=57.02 Aligned_cols=46 Identities=15% Similarity=0.142 Sum_probs=41.0
Q ss_pred CceecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc
Q psy1962 3 DKLKIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ 49 (79)
Q Consensus 3 ~~l~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~ 49 (79)
+++++|+| .++++++||+++.++++++.++++.++.+ |+++++||.
T Consensus 279 ~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~-gakll~gg~ 325 (488)
T TIGR02518 279 EAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE-DAKVLIGEQ 325 (488)
T ss_pred HHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC-CCEEEEeCC
Confidence 46788996 56788899999999999999999999998 899999874
No 120
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=97.67 E-value=3e-05 Score=55.37 Aligned_cols=56 Identities=7% Similarity=0.054 Sum_probs=44.0
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc-c-cCCCCCeEeee---EEecCC--Cchhhc
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ-Y-DERGERVKESS---DLEDLA--FIARNT 73 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~-~-~~~~g~~v~Pt---il~~v~--~~~~~~ 73 (79)
+||+++.+|++++.++++++.++ |++++.|+. . ....|+|++|| ++.+++ .+|++.
T Consensus 262 ~gpli~~~~~~~v~~~i~~a~~~-Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~ 324 (439)
T cd07081 262 GAYKLTAEELQQVQPVILKNGDV-NRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPF 324 (439)
T ss_pred CCccCCHHHHHHHHHHHHhcCCc-CCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchh
Confidence 59999999999999999999987 787754432 1 11248899998 999888 888753
No 121
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=97.11 E-value=0.00027 Score=50.35 Aligned_cols=56 Identities=4% Similarity=-0.096 Sum_probs=43.2
Q ss_pred cccCCHHHHHHHHHHHHHHhhC-CCcEEEeCCccc---CCCCCeEe---eeEEecCCCchhhc
Q psy1962 18 GAVIDKKAFDRITGYIKHAKSS-PNLEIIGGGQYD---ERGERVKE---SSDLEDLAFIARNT 73 (79)
Q Consensus 18 Gpli~~~~~~rv~~~i~~a~~~-~ga~i~~gg~~~---~~~g~~v~---Ptil~~v~~~~~~~ 73 (79)
..+++++|++++.++++++.+. +|++++.||... ...|+|++ |||+++++++|+..
T Consensus 265 ~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~ 327 (429)
T cd07121 265 AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFV 327 (429)
T ss_pred CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCcc
Confidence 3589999999999999988752 258888887431 12478887 59999999998754
No 122
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=96.50 E-value=0.0022 Score=46.23 Aligned_cols=54 Identities=4% Similarity=-0.104 Sum_probs=39.0
Q ss_pred cccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcc---cCCCCCeE---eeeEEecCCCchhh
Q psy1962 18 GAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQY---DERGERVK---ESSDLEDLAFIARN 72 (79)
Q Consensus 18 Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~---~~~~g~~v---~Ptil~~v~~~~~~ 72 (79)
+++|+++|++++.++++++.++ +++++.|+.. ....|+|+ +|||+++++++|..
T Consensus 297 ~~li~~~~~~~v~~~l~~~~~~-~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i 356 (465)
T PRK15398 297 AVLLTAEQAEKLQKVVLKNGGT-VNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPF 356 (465)
T ss_pred CccCCHHHHHHHHHHHhhcccc-cchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCch
Confidence 4799999999999999865433 4566666532 11246666 48999999998875
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=95.52 E-value=0.0071 Score=46.53 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=40.1
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEE-EeCCccc---CCCCCeEeeeE------EecCCCchhhc
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEI-IGGGQYD---ERGERVKESSD------LEDLAFIARNT 73 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i-~~gg~~~---~~~g~~v~Pti------l~~v~~~~~~~ 73 (79)
.++|++++|++++.++++++... ++.. ++|+... ...|+|++|++ +++++++|+..
T Consensus 275 g~~l~~~~~~~~v~~~i~~a~~~-~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~ 340 (862)
T PRK13805 275 GAYFLNKKELKKLEKFIFGKENG-ALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLS 340 (862)
T ss_pred CCeeCCHHHHHHHHHHHhhccCC-CcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcch
Confidence 37999999999999999987653 4432 4455321 12478899997 77888888654
No 124
>KOG2449|consensus
Probab=95.04 E-value=0.047 Score=34.04 Aligned_cols=61 Identities=15% Similarity=-0.024 Sum_probs=39.8
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+.+++-+...++++. .+...||..+++.-.-.-|..+.+.|. ..|+|+.||||. |+++|..
T Consensus 20 k~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~ms~ 80 (157)
T KOG2449|consen 20 KVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNMSC 80 (157)
T ss_pred hheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCcce
Confidence 445665555666666 677788888886421111344555443 467899999998 8888864
No 125
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=93.57 E-value=0.021 Score=40.96 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=33.1
Q ss_pred ecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCC
Q psy1962 6 KIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGG 48 (79)
Q Consensus 6 ~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg 48 (79)
++|++ .+.++.+||+++.++++++..+++.+..+ |++++.++
T Consensus 273 ~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-ga~vl~~~ 315 (436)
T cd07122 273 KLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPE-DTKVLVAE 315 (436)
T ss_pred HHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCC-CCeEEEEe
Confidence 66777 35677799999999999988888777776 78887665
No 126
>PF08846 DUF1816: Domain of unknown function (DUF1816); InterPro: IPR014945 Q4C9H3 from SWISSPROT is associated with the IPR008213 from INTERPRO domain suggesting this protein could have a role in phycobilisomes.
Probab=62.60 E-value=12 Score=20.45 Aligned_cols=28 Identities=21% Similarity=0.368 Sum_probs=21.5
Q ss_pred ccccCCHHHHH-HHHHHHHHHhhCCCcEEE
Q psy1962 17 AGAVIDKKAFD-RITGYIKHAKSSPNLEII 45 (79)
Q Consensus 17 ~Gpli~~~~~~-rv~~~i~~a~~~~ga~i~ 45 (79)
+||..+++.++ .+..|+++..++ |++.+
T Consensus 25 FGPF~s~~eA~~~~~gyieDL~~E-ga~~I 53 (68)
T PF08846_consen 25 FGPFDSREEAEAALPGYIEDLESE-GAQGI 53 (68)
T ss_pred eCCcCCHHHHHHHhccHHHHHHhh-CcceE
Confidence 79999998775 455699999887 56543
No 127
>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.
Probab=49.71 E-value=38 Score=24.94 Aligned_cols=35 Identities=9% Similarity=0.143 Sum_probs=29.1
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~ 51 (79)
.+.|++.....+++.+.+.++.. |.|=++.||.|-
T Consensus 32 ~~PPLV~a~Ei~~Lr~~La~va~-G~aFlLQgGDCA 66 (443)
T TIGR01358 32 SLPPLVFAGEIRRLKRQLAQVAE-GEAFLLQGGDCA 66 (443)
T ss_pred cCCCcCCHHHHHHHHHHHHHHhC-CCEEEEeCcccc
Confidence 37899999999999999988765 467788899763
No 128
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=48.41 E-value=45 Score=23.36 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=24.6
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ 49 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~ 49 (79)
-||.|++++++.+.++++....+ ...++..|.
T Consensus 107 ~Gp~is~~~~~~~l~~~~~~l~~-~d~VvlsGS 138 (310)
T COG1105 107 PGPEISEAELEQFLEQLKALLES-DDIVVLSGS 138 (310)
T ss_pred CCCCCCHHHHHHHHHHHHHhccc-CCEEEEeCC
Confidence 69999999999999999885554 455555553
No 129
>PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase
Probab=47.53 E-value=44 Score=24.83 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=29.1
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~ 51 (79)
.+.||+.....+++.+.+.++.. |.|=++.||.|-
T Consensus 51 ~~PPLV~a~Ei~~Lr~~LA~va~-G~AFlLQgGDCA 85 (474)
T PLN02291 51 AFPPLVFAGEARSLEERLAEAAM-GRAFLLQGGDCA 85 (474)
T ss_pred cCCCcCCHHHHHHHHHHHHHHhc-CCeEEEeCCchh
Confidence 47899999999999999988765 467788899763
No 130
>PF01474 DAHP_synth_2: Class-II DAHP synthetase family; InterPro: IPR002480 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family (2.5.1.54 from EC) catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I (see IPR006218 from INTERPRO) includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products.; GO: 0003849 3-deoxy-7-phosphoheptulonate synthase activity, 0009073 aromatic amino acid family biosynthetic process; PDB: 3NUD_A 3KGF_A 2W19_A 3NUE_B 3PFP_A 2B7O_B 3RZI_A 3NV8_B 2W1A_A.
Probab=44.45 E-value=40 Score=24.81 Aligned_cols=35 Identities=9% Similarity=0.131 Sum_probs=26.6
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~ 51 (79)
.+.||+.....+++.+.+.++.. |.+-++.||.|-
T Consensus 33 ~~PPLV~~~Ei~~Lr~~La~va~-G~AFlLQgGDCA 67 (439)
T PF01474_consen 33 SLPPLVFAGEIRRLREQLADVAR-GEAFLLQGGDCA 67 (439)
T ss_dssp TS--SS-HHHHHHHHHHHHHHHT-TSSEEEEEEESS
T ss_pred cCCCCCCHHHHHHHHHHHHHHHc-CCeEEEeCCCcc
Confidence 37899999999999999988765 467888899763
No 131
>PF01383 CpcD: CpcD/allophycocyanin linker domain; InterPro: IPR008213 Ferredoxin-NADP(+) oxydoreductase (FNR) (EC=1.18.1.2) transfers electrons from ferredoxin (or flavodoxin) to NADP(+) to generate NADPH. In eucaryotes, the nuclear-encoded, chloroplast-targeted enzyme contains two domains: an FAD-binding domain (see PDOC51384 from PROSITEDOC) and an NADP(+)-binding domain. With the exception of Gloeobacter violaceus PCC 7421, the predicted sequences of all cyanobacterial petH genes, encoding FNR, correspond to a protein containing three domains. Two domains at the C terminus correspond to the FAD- and NADP(+)-binding domains of higher plants FNR protein, which compose the catalytic domains of the enzyme. The N-terminal domain is similar to phycobilisome (PBS)-associated linker proteins from numerous cyanobacteria [, , ] and is associated with: - CpcD, the phycocyanin (PC)-associated, rod-capping, linker polypeptide of PBS. The similarity spans nearly the entire sequence of this linker class. - CpcC, the PC-associated rod linker polypeptide. The similarity is confined only to the C terminus of this linker class. - ApcC, the allophycocyanin (APC)-associated, core linker polypeptide. The similarity only correspond to about half of the molecule. The CpcD-like domain has an elongated shape and consists of a three-stranded beta-sheet, two alpha-helices, one of which has only about one turn, and the connecting random coil segments [].; GO: 0030089 phycobilisome; PDB: 1B33_O.
Probab=39.61 E-value=57 Score=16.82 Aligned_cols=19 Identities=5% Similarity=0.293 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhCCCcEEE
Q psy1962 26 FDRITGYIKHAKSSPNLEII 45 (79)
Q Consensus 26 ~~rv~~~i~~a~~~~ga~i~ 45 (79)
|+++.+.++...+. |++|+
T Consensus 33 y~~ls~~~q~I~r~-GGkIv 51 (56)
T PF01383_consen 33 YSQLSQEMQRINRQ-GGKIV 51 (56)
T ss_dssp HHHHHHHHHHHHHC-T-EEE
T ss_pred HHHhHHHHHHHHHC-CCEEE
Confidence 57888888887777 78886
No 132
>PF07508 Recombinase: Recombinase; InterPro: IPR011109 This domain is usually found associated with IPR006119 from INTERPRO in putative integrases/recombinases of mobile genetic elements of diverse bacteria and phages.
Probab=39.36 E-value=31 Score=19.02 Aligned_cols=19 Identities=16% Similarity=0.538 Sum_probs=16.3
Q ss_pred cccccCCHHHHHHHHHHHH
Q psy1962 16 FAGAVIDKKAFDRITGYIK 34 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~ 34 (79)
.+-|+|++..|+++++.++
T Consensus 82 ~~~~IIs~~~f~~vq~~l~ 100 (102)
T PF07508_consen 82 YHPPIISEEEFERVQKKLD 100 (102)
T ss_pred CCCCccCHHHHHHHHHHHh
Confidence 3669999999999998875
No 133
>TIGR02117 chp_urease_rgn conserved hypothetical protein. This conserved hypothetical protein of unknown function is found in several Proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.
Probab=35.98 E-value=1.1e+02 Score=20.06 Aligned_cols=19 Identities=11% Similarity=0.469 Sum_probs=16.5
Q ss_pred cCCHHHHHHHHHHHHHHhh
Q psy1962 20 VIDKKAFDRITGYIKHAKS 38 (79)
Q Consensus 20 li~~~~~~rv~~~i~~a~~ 38 (79)
.+|+.|++++.++|+..-+
T Consensus 127 ~vs~~qy~~L~~~I~~sf~ 145 (208)
T TIGR02117 127 LVSENQYNRLMDFISASFV 145 (208)
T ss_pred EcCHHHHHHHHHHHHHhcC
Confidence 6899999999999987644
No 134
>KOG1757|consensus
Probab=32.33 E-value=14 Score=22.20 Aligned_cols=9 Identities=56% Similarity=0.615 Sum_probs=7.0
Q ss_pred hhhcccccc
Q psy1962 70 ARNTLRHLS 78 (79)
Q Consensus 70 ~~~~~~~~~ 78 (79)
-|+|||||.
T Consensus 83 KRitprHlq 91 (131)
T KOG1757|consen 83 KRITPRHLQ 91 (131)
T ss_pred eeccchhhe
Confidence 488999974
No 135
>PF09601 DUF2459: Protein of unknown function (DUF2459); InterPro: IPR011727 This conserved hypothetical protein of unknown function is predominantly found in proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.
Probab=31.52 E-value=1.4e+02 Score=18.93 Aligned_cols=21 Identities=10% Similarity=0.339 Sum_probs=17.3
Q ss_pred cccCCHHHHHHHHHHHHHHhh
Q psy1962 18 GAVIDKKAFDRITGYIKHAKS 38 (79)
Q Consensus 18 Gpli~~~~~~rv~~~i~~a~~ 38 (79)
-=.++++|++++.++|+..-+
T Consensus 95 ~i~ls~~~y~~L~~~I~~sf~ 115 (173)
T PF09601_consen 95 PIRLSEAQYRRLVAFIRASFQ 115 (173)
T ss_pred EEEcCHHHHHHHHHHHHHHhc
Confidence 336899999999999987654
No 136
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=30.69 E-value=51 Score=23.48 Aligned_cols=44 Identities=5% Similarity=0.121 Sum_probs=26.1
Q ss_pred cCCHHHHHHHHHHHH-HHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 20 VIDKKAFDRITGYIK-HAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 20 li~~~~~~rv~~~i~-~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+|.+.-++.+.+.+. ...+. |++++.|+.. . .|++|| ++++|++
T Consensus 258 ~V~~si~d~f~~~l~~~~~~~-ga~~~~g~~~---~-~~~~pt----v~~d~~i 302 (406)
T cd07079 258 LVHRDIAEEFLPKLAEALREA-GVELRGDEET---L-AILPGA----KPATEED 302 (406)
T ss_pred EEeHHHHHHHHHHHHHHHHHC-CCEEecCHHH---H-Hhcccc----cCCCcch
Confidence 456677777665444 44445 7886544321 1 378888 6677664
No 137
>TIGR02530 flg_new flagellar operon protein. Members of this family are found in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function is unknown.
Probab=30.28 E-value=85 Score=18.27 Aligned_cols=23 Identities=13% Similarity=0.351 Sum_probs=19.3
Q ss_pred cCCHHHHHHHHHHHHHHhhCCCcE
Q psy1962 20 VIDKKAFDRITGYIKHAKSSPNLE 43 (79)
Q Consensus 20 li~~~~~~rv~~~i~~a~~~~ga~ 43 (79)
-++..+.+++.+-++.|.++ |++
T Consensus 31 ~l~~~~~~~i~~av~~A~~K-G~k 53 (96)
T TIGR02530 31 SINPDDWKKLLEAVEEAESK-GVK 53 (96)
T ss_pred CCCHHHHHHHHHHHHHHHhc-CCC
Confidence 37888999999999999988 554
No 138
>KOG0805|consensus
Probab=29.63 E-value=2e+02 Score=20.08 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHHhhCCCcEEEe
Q psy1962 22 DKKAFDRITGYIKHAKSSPNLEIIG 46 (79)
Q Consensus 22 ~~~~~~rv~~~i~~a~~~~ga~i~~ 46 (79)
.++-++++++++.++.+. |++++.
T Consensus 32 tpaTL~K~~~~~~Eaa~~-Ga~LV~ 55 (337)
T KOG0805|consen 32 TPATLDKAEKYIVEAASK-GAELVL 55 (337)
T ss_pred CHHHHHHHHHHHHHHhcC-CceEEE
Confidence 467789999999999987 788764
No 139
>PHA02415 DNA primase domain-containing protein
Probab=28.85 E-value=57 Score=26.16 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=23.3
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcE
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLE 43 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~ 43 (79)
.+|++-++++|.|+...++++..- |++
T Consensus 476 ~~g~i~~p~~f~rmv~~ler~a~l-g~r 502 (930)
T PHA02415 476 KFGPIWAPAPFKRMVNILERGADL-GAR 502 (930)
T ss_pred hcCcccCcHHHHHHHHHHHHhhhc-chh
Confidence 489999999999999999988765 555
No 140
>cd07972 OBF_DNA_ligase_Arch_LigB The Oligonucleotide/oligosaccharide binding (OB)-fold domain of archaeal and bacterial ATP-dependent DNA ligases is a DNA-binding module that is part of the catalytic core unit. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation using nicked nucleic acid substrates with the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. DNA ligases play a vital role in the diverse processes of DNA replication, recombination and repair. ATP-dependent ligases are present in many organisms such as viruses, bacteriohages, eukarya, archaea and bacteria. Bacterial DNA ligases are divided into two broad classes: NAD-dependent and ATP-dependent. All bacterial species have a NAD-dependent DNA ligase (LigA). Some bacterial genomes contain multiple genes for DNA ligases that are predicted to use ATP as their cofactor, including Mycobacterium tuberculosis LigB, LigC, and LigD. This group is composed of Pyrococcus furiosus DN
Probab=27.68 E-value=1.3e+02 Score=17.67 Aligned_cols=41 Identities=7% Similarity=0.056 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 21 IDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 21 i~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
.+.++++.+.+.++..... + .....|+.|.|+..|.....+
T Consensus 46 ~~~~~~~~l~~~l~~~~~~---~--------~~~~~wv~P~lV~eV~~~e~t 86 (122)
T cd07972 46 LTDEELEELTERLRELIIE---K--------FGPVVSVKPELVFEVAFEEIQ 86 (122)
T ss_pred CCHHHHHHHHHHhhhhhcc---c--------cCCcEEEeceEEEEEEeeEEE
Confidence 6888888888877543221 0 123479999888777754433
No 141
>COG5007 Predicted transcriptional regulator, BolA superfamily [Transcription]
Probab=27.11 E-value=1.3e+02 Score=16.99 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhcccc
Q psy1962 27 DRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNTLRH 76 (79)
Q Consensus 27 ~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~~~~ 76 (79)
+.|+.+++.+.. ..++...| +|..+.-+++.+.-.+++..-||
T Consensus 4 e~Ik~ll~~~L~--~e~v~V~G-----dg~Hf~vi~Vs~~F~g~srvkrq 46 (80)
T COG5007 4 EEIKSLLENALP--LEEVEVEG-----DGSHFQVIAVSEEFAGKSRVKRQ 46 (80)
T ss_pred HHHHHHHHhcCC--ccEEEEec-----CCceEEEEEehHhhcCccHHHHH
Confidence 567788887764 35565544 45677778887777777666554
No 142
>PF13119 DUF3973: Domain of unknown function (DUF3973)
Probab=26.22 E-value=31 Score=16.87 Aligned_cols=18 Identities=6% Similarity=-0.221 Sum_probs=12.7
Q ss_pred CCCCeEeeeEEecCCCch
Q psy1962 53 RGERVKESSDLEDLAFIA 70 (79)
Q Consensus 53 ~~g~~v~Ptil~~v~~~~ 70 (79)
+.|+||.|-+-+-+...|
T Consensus 22 ~ngfYIdPflgek~hLGM 39 (41)
T PF13119_consen 22 KNGFYIDPFLGEKYHLGM 39 (41)
T ss_pred hCceeecccccceeeccc
Confidence 468999998876554433
No 143
>PF08625 Utp13: Utp13 specific WD40 associated domain; InterPro: IPR013934 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]. This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp13 is a nucleolar protein and component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA []. Upt13 is also a component of the Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome []. Components of the Pwp2 complex are: Utp1 (Pwp2), Utp6, Utp12 (Dip2), Utp13, Utp18, and Utp21. The relationship between the Pwp2 complex and the t-Utps complex [] that also associates with the 5' end of nascent pre-18S rRNA is unclear. ; GO: 0006364 rRNA processing, 0032040 small-subunit processome
Probab=26.05 E-value=68 Score=19.68 Aligned_cols=16 Identities=13% Similarity=0.476 Sum_probs=13.1
Q ss_pred CCHHHHHHHHHHHHHH
Q psy1962 21 IDKKAFDRITGYIKHA 36 (79)
Q Consensus 21 i~~~~~~rv~~~i~~a 36 (79)
-+++||.|+.+++++.
T Consensus 115 YteRH~~Rl~~L~q~s 130 (141)
T PF08625_consen 115 YTERHFQRLDRLLQKS 130 (141)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4689999999988764
No 144
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=24.63 E-value=1.7e+02 Score=19.33 Aligned_cols=25 Identities=8% Similarity=0.123 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHHhhCCCcEEEe
Q psy1962 21 IDKKAFDRITGYIKHAKSSPNLEIIG 46 (79)
Q Consensus 21 i~~~~~~rv~~~i~~a~~~~ga~i~~ 46 (79)
.+..|.++|.++++.+.+. |.++.+
T Consensus 179 ~~~~q~~~l~~~v~~a~~~-Gl~vr~ 203 (228)
T cd08577 179 TPEDEKEKLKSIIDKAHAR-GKKVRF 203 (228)
T ss_pred CCHHHHHHHHHHHHHHHHC-CCEEEE
Confidence 5667999999999999987 666543
No 145
>PF11464 Rbsn: Rabenosyn Rab binding domain; InterPro: IPR021565 Rabenosyn-5 (Rbsn) is a multivalent effector with interacts with the Rab family.Rsbn contains distinct Rab4 and Rab5 binding sites within residues 264-500 and 627-784 respectively []. Rab proteins are GTPases involved in the regulation of all stages of membrane trafficking []. ; PDB: 1Z0K_B 1YZM_A 1Z0J_B.
Probab=23.97 E-value=1.1e+02 Score=15.09 Aligned_cols=16 Identities=38% Similarity=0.627 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHhhC
Q psy1962 24 KAFDRITGYIKHAKSS 39 (79)
Q Consensus 24 ~~~~rv~~~i~~a~~~ 39 (79)
.|..-|.+||+.|+..
T Consensus 3 eQi~~I~~~I~qAk~~ 18 (42)
T PF11464_consen 3 EQINIIESYIKQAKAA 18 (42)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4667889999999875
No 146
>PF07090 DUF1355: Protein of unknown function (DUF1355); InterPro: IPR010768 This entry is found in several hypothetical bacterial proteins of around 250 residues in length. The function of these proteins is unknown.; PDB: 2GK3_D 3SOZ_C 3RHT_D.
Probab=23.50 E-value=1.2e+02 Score=19.45 Aligned_cols=25 Identities=12% Similarity=0.323 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHHHhhCCCcEEEeCCcc
Q psy1962 22 DKKAFDRITGYIKHAKSSPNLEIIGGGQY 50 (79)
Q Consensus 22 ~~~~~~rv~~~i~~a~~~~ga~i~~gg~~ 50 (79)
+..+++.|.+|+++ ||+-+..||..
T Consensus 87 ~~~~~~~l~~yV~~----GGgLlmigG~~ 111 (177)
T PF07090_consen 87 SPNQLELLADYVRD----GGGLLMIGGPR 111 (177)
T ss_dssp -HHHHHHHHHHHHT----T-EEEEE-STT
T ss_pred CHHHHHHHHHHHHh----CCEEEEEeChh
Confidence 67777888877753 57777788864
No 147
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=23.28 E-value=2.6e+02 Score=19.38 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=28.4
Q ss_pred ccccCCHHHHHHHHHHHHHHhhC-CCcEEEeCCcccCCCCCeEeeeE
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSS-PNLEIIGGGQYDERGERVKESSD 62 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~-~ga~i~~gg~~~~~~g~~v~Pti 62 (79)
-|-+=|.+|.+.+.+++..-++. +.+.+++.--.-+.+|.|+.|-+
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~ 125 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEV 125 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccch
Confidence 57777888888888888776654 23345554322223477877643
No 148
>PF11294 DUF3095: Protein of unknown function (DUF3095); InterPro: IPR021445 Some members in this bacterial family of proteins are annotated as adenylyl cyclase however this cannot be confirmed. Currently no function is known.
Probab=22.09 E-value=1.4e+02 Score=21.62 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHHHHHhhCCCcEEEeCCcc
Q psy1962 21 IDKKAFDRITGYIKHAKSSPNLEIIGGGQY 50 (79)
Q Consensus 21 i~~~~~~rv~~~i~~a~~~~ga~i~~gg~~ 50 (79)
.+.+|.++++++++++.++ +.+.+|-..
T Consensus 308 ~t~~~~~~l~~~L~~~~~~--G~~~YGlH~ 335 (373)
T PF11294_consen 308 CTPEQRDALEARLEQAEAA--GKLRYGLHR 335 (373)
T ss_pred CCHHHHHHHHHHHHHHHHC--CceEEeeec
Confidence 5789999999999999987 378777654
No 149
>cd07574 nitrilase_Rim1_like Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases). Some members of this subgroup are implicated in post-translational modification, as they contain an N-terminal GCN5-related N-acetyltransferase (GNAT) protein RimI family domain. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 12. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=21.69 E-value=1.4e+02 Score=19.50 Aligned_cols=23 Identities=4% Similarity=0.163 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEe
Q psy1962 23 KKAFDRITGYIKHAKSSPNLEIIG 46 (79)
Q Consensus 23 ~~~~~rv~~~i~~a~~~~ga~i~~ 46 (79)
+.-.+++.++++.|.++ |+.+++
T Consensus 17 ~~n~~~i~~~i~~A~~~-gadliv 39 (280)
T cd07574 17 EEFAAKVEYWVAEAAGY-GADLLV 39 (280)
T ss_pred HHHHHHHHHHHHHHHHc-CCCEEE
Confidence 45668999999999887 788765
No 150
>cd07570 GAT_Gln-NAD-synth Glutamine aminotransferase (GAT, glutaminase) domain of glutamine-dependent NAD synthetases (class 7 and 8 nitrilases). Glutamine-dependent NAD synthetases are bifunctional enzymes, which have an N-terminal GAT domain and a C-terminal NAD+ synthetase domain. The GAT domain is a glutaminase (EC 3.5.1.2) which hydrolyses L-glutamine to L-glutamate and ammonia. The ammonia is used by the NAD+ synthetase domain in the ATP-dependent amidation of nicotinic acid adenine dinucleotide. Glutamine aminotransferases are categorized depending on their active site residues into different unrelated classes. This class of GAT domain belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this sub
Probab=20.59 E-value=1.6e+02 Score=19.03 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEe
Q psy1962 23 KKAFDRITGYIKHAKSSPNLEIIG 46 (79)
Q Consensus 23 ~~~~~rv~~~i~~a~~~~ga~i~~ 46 (79)
+..++++.+++++|.++ |+.+++
T Consensus 15 ~~N~~~~~~~i~~A~~~-gadlvv 37 (261)
T cd07570 15 EGNAEKILEAIREAKAQ-GADLVV 37 (261)
T ss_pred HHHHHHHHHHHHHHHHc-CCCEEE
Confidence 56778999999999887 787765
No 151
>KOG2756|consensus
Probab=20.29 E-value=2e+02 Score=20.36 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=19.6
Q ss_pred cccCCHHHHHHHHHHHHHHhhC-CCcEEEeCCcc
Q psy1962 18 GAVIDKKAFDRITGYIKHAKSS-PNLEIIGGGQY 50 (79)
Q Consensus 18 Gpli~~~~~~rv~~~i~~a~~~-~ga~i~~gg~~ 50 (79)
+|--.-+||....+.++++.+. ++|.+++||..
T Consensus 219 h~P~r~~qF~~~~~k~~EaIe~lPnA~ViFGGD~ 252 (349)
T KOG2756|consen 219 HAPERMNQFKMVLKKMQEAIESLPNATVIFGGDT 252 (349)
T ss_pred CChHHHHHHHHHHHHHHHHHHhCCCceEEEcCcc
Confidence 4434445665444444554443 58999999963
No 152
>cd07569 DCase N-carbamyl-D-amino acid amidohydrolase (DCase, class 6 nitrilases). DCase hydrolyses N-carbamyl-D-amino acids to produce D-amino acids. It is an important biocatalyst in the pharmaceutical industry, producing useful D-amino acids for example in the preparation of beta-lactam antibiotics. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 6. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Agrobacterium radiobacter DCase forms a tetramer (dimer of dimers). Some DCases may form trimers.
Probab=20.16 E-value=1.7e+02 Score=19.62 Aligned_cols=23 Identities=13% Similarity=0.299 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEe
Q psy1962 23 KKAFDRITGYIKHAKSSPNLEIIG 46 (79)
Q Consensus 23 ~~~~~rv~~~i~~a~~~~ga~i~~ 46 (79)
++.++++.++++.|.++ |+.+++
T Consensus 21 ~~n~~~i~~~i~~A~~~-gadliv 43 (302)
T cd07569 21 ESVVARLIALLEEAASR-GAQLVV 43 (302)
T ss_pred HHHHHHHHHHHHHHHhC-CCcEEE
Confidence 45679999999999887 788775
Done!