Query psy1962
Match_columns 79
No_of_seqs 172 out of 1518
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 20:43:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 99.6 1.5E-15 5.1E-20 107.5 6.9 70 2-72 310-383 (490)
2 2o2p_A Formyltetrahydrofolate 99.6 2.6E-15 8.8E-20 106.9 7.7 71 2-73 346-416 (517)
3 3ifg_A Succinate-semialdehyde 99.6 2.4E-15 8.2E-20 106.3 6.8 70 3-73 316-385 (484)
4 3ros_A NAD-dependent aldehyde 99.6 2.7E-15 9.3E-20 106.0 6.8 70 3-73 290-359 (484)
5 4e3x_A Delta-1-pyrroline-5-car 99.6 4.9E-15 1.7E-19 106.4 7.6 71 2-73 372-444 (563)
6 4f3x_A Putative aldehyde dehyd 99.6 4.2E-15 1.4E-19 105.3 6.6 71 2-73 327-398 (498)
7 3rh9_A Succinate-semialdehyde 99.6 4.9E-15 1.7E-19 105.2 6.6 70 3-73 315-385 (506)
8 3iwj_A Putative aminoaldehyde 99.6 6E-15 2E-19 104.6 7.1 71 2-73 318-390 (503)
9 1bxs_A Aldehyde dehydrogenase; 99.6 6.4E-15 2.2E-19 104.5 7.2 70 2-72 327-396 (501)
10 1o04_A Aldehyde dehydrogenase, 99.6 6E-15 2E-19 104.6 6.9 69 3-72 327-395 (500)
11 3ed6_A Betaine aldehyde dehydr 99.6 7.8E-15 2.7E-19 104.5 7.5 71 2-73 337-411 (520)
12 3jz4_A Succinate-semialdehyde 99.6 1.2E-14 4.2E-19 102.4 7.9 71 2-73 312-382 (481)
13 2j6l_A Aldehyde dehydrogenase 99.6 8.7E-15 3E-19 103.7 7.1 70 3-73 328-397 (500)
14 3u4j_A NAD-dependent aldehyde 99.5 1E-14 3.5E-19 104.0 7.0 70 3-73 329-399 (528)
15 3i44_A Aldehyde dehydrogenase; 99.5 9.6E-15 3.3E-19 103.5 6.8 70 3-73 328-400 (497)
16 3b4w_A Aldehyde dehydrogenase; 99.5 1.2E-14 4E-19 103.0 6.8 69 3-72 313-383 (495)
17 2imp_A Lactaldehyde dehydrogen 99.5 1.7E-14 5.7E-19 101.7 7.1 70 3-73 310-380 (479)
18 3qan_A 1-pyrroline-5-carboxyla 99.5 2E-14 6.8E-19 102.7 7.3 70 2-73 345-414 (538)
19 3ek1_A Aldehyde dehydrogenase; 99.5 1.3E-14 4.6E-19 103.0 6.3 68 3-73 336-403 (504)
20 1wnd_A Putative betaine aldehy 99.5 2.2E-14 7.6E-19 101.6 6.9 69 3-73 326-396 (495)
21 3etf_A Putative succinate-semi 99.5 2.4E-14 8.1E-19 100.4 6.9 70 3-73 293-362 (462)
22 1a4s_A ALDH, betaine aldehyde 99.5 2.2E-14 7.4E-19 101.8 6.5 69 3-72 322-396 (503)
23 4e4g_A Methylmalonate-semialde 99.5 2.3E-14 7.9E-19 102.0 6.4 70 2-72 329-402 (521)
24 3k2w_A Betaine-aldehyde dehydr 99.5 1.8E-14 6.3E-19 101.9 5.2 69 3-72 316-388 (497)
25 2ve5_A BADH, betaine aldehyde 99.5 4.8E-14 1.6E-18 99.5 6.9 70 3-73 311-384 (490)
26 2w8n_A Succinate-semialdehyde 99.5 5.1E-14 1.7E-18 99.5 6.5 66 5-72 320-386 (487)
27 3r31_A BADH, betaine aldehyde 99.5 3.2E-14 1.1E-18 101.2 5.4 70 3-73 317-389 (517)
28 3pqa_A Lactaldehyde dehydrogen 99.5 7E-14 2.4E-18 98.9 7.0 66 3-73 300-365 (486)
29 2d4e_A 5-carboxymethyl-2-hydro 99.5 6.6E-14 2.3E-18 99.5 6.9 68 3-72 330-405 (515)
30 1uxt_A Glyceraldehyde-3-phosph 99.5 7E-14 2.4E-18 99.1 6.2 66 3-72 322-391 (501)
31 3r64_A NAD dependent benzaldeh 99.5 9E-14 3.1E-18 98.6 6.7 67 3-73 319-385 (508)
32 1t90_A MMSDH, probable methylm 99.5 1E-13 3.4E-18 97.9 6.8 70 2-72 307-377 (486)
33 3prl_A NADP-dependent glyceral 99.5 9.2E-14 3.1E-18 98.6 6.6 66 3-73 318-383 (505)
34 1uzb_A 1-pyrroline-5-carboxyla 99.5 9.6E-14 3.3E-18 98.7 6.5 69 2-73 346-414 (516)
35 3ty7_A Putative aldehyde dehyd 99.5 9.5E-14 3.2E-18 97.8 6.3 69 3-72 307-378 (478)
36 4dng_A Uncharacterized aldehyd 99.5 1.2E-13 4.1E-18 97.4 6.8 66 3-72 312-377 (485)
37 3ju8_A Succinylglutamic semial 99.4 1.4E-13 4.6E-18 97.3 6.6 68 3-72 308-376 (490)
38 2y53_A Aldehyde dehydrogenase 99.4 2.1E-13 7.1E-18 97.2 6.8 67 2-70 323-395 (534)
39 4h7n_A Aldehyde dehydrogenase; 99.4 9.2E-14 3.1E-18 97.8 4.8 70 3-73 291-361 (474)
40 1euh_A NADP dependent non phos 99.4 1.3E-13 4.4E-18 97.1 5.3 66 3-73 309-374 (475)
41 4f9i_A Proline dehydrogenase/d 99.4 3.2E-13 1.1E-17 102.2 5.7 69 3-73 840-908 (1026)
42 3sza_A Aldehyde dehydrogenase, 99.2 1.4E-11 4.7E-16 86.8 6.5 60 7-73 288-347 (469)
43 3haz_A Proline dehydrogenase; 99.0 2.9E-10 9.9E-15 86.1 5.2 59 3-65 819-877 (1001)
44 3lns_A Benzaldehyde dehydrogen 98.9 2.9E-09 1E-13 74.6 5.9 57 10-73 299-355 (457)
45 1ez0_A ALDH, aldehyde dehydrog 98.0 4.4E-06 1.5E-10 59.2 4.1 49 17-69 319-367 (510)
46 3v4c_A Aldehyde dehydrogenase 98.0 2.3E-06 7.8E-11 61.0 1.9 49 14-69 354-402 (528)
47 3my7_A Alcohol dehydrogenase/a 97.1 1.1E-05 3.7E-10 56.5 -4.2 55 17-73 270-334 (452)
48 3k9d_A LMO1179 protein, aldehy 96.9 1.8E-05 6.1E-10 55.5 -4.3 45 4-49 284-329 (464)
49 3rzi_A Probable 3-deoxy-D-arab 39.6 39 0.0013 24.0 4.0 35 16-51 54-88 (462)
50 2ikf_A RNA uridylyl transferas 34.7 60 0.002 21.6 4.3 35 4-38 312-346 (353)
51 4fh3_A Poly(A) RNA polymerase 28.8 79 0.0027 20.7 4.0 33 5-37 298-330 (349)
52 3o85_A Ribosomal protein L7AE; 24.0 1.1E+02 0.0036 17.3 3.8 31 16-48 6-36 (122)
53 4e8f_A Poly(A) RNA polymerase 22.6 1.2E+02 0.0043 20.6 4.2 33 5-37 326-358 (405)
54 3omy_A Protein TRAM; DNA bindi 21.3 88 0.003 15.4 3.2 23 19-42 6-28 (52)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.60 E-value=1.5e-15 Score=107.54 Aligned_cols=70 Identities=14% Similarity=0.274 Sum_probs=63.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|||.+++++||||||++|++|+.++|++++++ |+++++||.... .+|+|++||||++++++|+.
T Consensus 310 ~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i 383 (490)
T 2wme_A 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQ-KARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTI 383 (490)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHH
T ss_pred HHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhc-CCEEEECCcccCcccccCCCccCCEEEEcCCCCChh
Confidence 35789999999999999999999999999999999998 899999987532 35899999999999999975
No 2
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=99.59 E-value=2.6e-15 Score=106.88 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=63.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|||.+++++||||||++|++++.+++++++++ |+++++||...+..|+|++||||++++++|+.-
T Consensus 346 ~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 416 (517)
T 2o2p_A 346 VEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKE-GATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIA 416 (517)
T ss_dssp HTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCSBCSSSSCCBCCEEEESCCTTSGGG
T ss_pred HHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEeccccCCCCCCeECCEEEeCCCCCChhh
Confidence 45789999999999999999999999999999999988 899999997543468999999999999998754
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=99.59 E-value=2.4e-15 Score=106.25 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=63.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++||||||++|++++.+++++++++ |+++++||...+..|+|++||||++++++|+..
T Consensus 316 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 385 (484)
T 3ifg_A 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAK-GASLMTGGKRHALGHGFFEPTVLTGVKPDMDVA 385 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCSBCTTCTTCBCCEEEEEECTTSGGG
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEECCCccCCCCceEcCEEEecCCCCChhh
Confidence 5678999999999999999999999999999999998 899999997644478999999999999999764
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=99.58 E-value=2.7e-15 Score=106.00 Aligned_cols=70 Identities=17% Similarity=0.085 Sum_probs=63.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|||.+++++||||||++|++|+.+++++++++ |+++++||...+..|+|++||||++++++|+..
T Consensus 290 ~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 359 (484)
T 3ros_A 290 SNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDA-GAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEEECCCCCCSSCCCCCEEEECCCTTSTTT
T ss_pred HhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc-CCeEEecCCcCCCCCceeCCeEeecCCCCCccc
Confidence 5688999999999999999999999999999999998 899999987544578999999999999998763
No 5
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=99.57 E-value=4.9e-15 Score=106.39 Aligned_cols=71 Identities=35% Similarity=0.473 Sum_probs=63.5
Q ss_pred CCceecCCC-CCCCCcccccCCHHHHHHHHHHHHHHhh-CCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDV-EYTDSFAGAVIDKKAFDRITGYIKHAKS-SPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp-~~~~~~~Gpli~~~~~~rv~~~i~~a~~-~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++||| .+++++|||||+++|++|+.++|+++++ + |+++++||..++..|+|++||||.+++++|++-
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~-ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~ 444 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSP-SLSILAGGQCNESVGYYVEPCIIESKDPQEPIM 444 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCT-TEEEEECCCEECSSSCEECCEEEEESCTTCGGG
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcC-CCEEEeCCccCCCCCcEecCEEEecCCCCChhh
Confidence 356889999 9999999999999999999999999985 5 799999997655579999999999999998763
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=99.56 E-value=4.2e-15 Score=105.33 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=63.8
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCc-EEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNL-EIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga-~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++|||||+++|++++.+++++++++ |+ ++++||...+..|+|++||||.+++++|+.-
T Consensus 327 ~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 398 (498)
T 4f3x_A 327 VSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ-KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIV 398 (498)
T ss_dssp HTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS-TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHH
T ss_pred HHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC-CCCEEEECCccCCCCCcEECCEEeecCCCCChhh
Confidence 35788999999999999999999999999999999998 79 9999997644579999999999999998753
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=99.56 E-value=4.9e-15 Score=105.23 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=62.8
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCC-CCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDER-GERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~-~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||...+. .|+|++||||.+++++|+..
T Consensus 315 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 385 (506)
T 3rh9_A 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDK-GASLVAGKQPAELGDGLFFPPTVVQGVDREMCCY 385 (506)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHH
T ss_pred HhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEecCCcCCCCCCcEECCeEEccCCCCChhh
Confidence 4678999999999999999999999999999999998 8999999975333 68999999999999998753
No 8
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=99.56 E-value=6e-15 Score=104.58 Aligned_cols=71 Identities=21% Similarity=0.316 Sum_probs=63.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++|||||++|++++.+++++++++ |+++++||...+ ..|+|++||||++++++|+.-
T Consensus 318 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~ 390 (503)
T 3iwj_A 318 IKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSE-GATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIW 390 (503)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHH
T ss_pred HHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHC-CCEEEecCCCCccCCCCceeCCeeeecCCCCchhh
Confidence 35688999999999999999999999999999999998 899999997543 468999999999999998753
No 9
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=99.56 E-value=6.4e-15 Score=104.48 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=62.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|||.+++++||||||++|++|+.+++++++++ |+++++||...+..|+|++||||.+++++|+.
T Consensus 327 ~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i 396 (501)
T 1bxs_A 327 AKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKE-GAKLECGGGPWGNKGYFIQPTVFSDVTDDMRI 396 (501)
T ss_dssp HTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEECSCCSEECSSSCEECCEEEESCCTTSHH
T ss_pred HHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCCeeCCEEEecCCCCCHH
Confidence 35788999999999999999999999999999999988 89999998654346899999999999999875
No 10
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=99.56 E-value=6e-15 Score=104.61 Aligned_cols=69 Identities=17% Similarity=0.265 Sum_probs=62.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|||.+++++||||||++|++|+.+++++++++ |+++++||...+..|+|++||||++++++|+.
T Consensus 327 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i 395 (500)
T 1o04_A 327 KSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE-GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395 (500)
T ss_dssp HHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCSBCCSSSSCBCCEEEESCCTTSHH
T ss_pred HhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCCeeCCEEEeCCCCCChh
Confidence 4678999999999999999999999999999999988 89999998754346899999999999999875
No 11
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=99.56 E-value=7.8e-15 Score=104.47 Aligned_cols=71 Identities=23% Similarity=0.310 Sum_probs=63.4
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++|||||++|++++.+++++++++ |+++++||.... ..|+|++||||.+++++|+..
T Consensus 337 ~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~ 411 (520)
T 3ed6_A 337 VKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE-GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIV 411 (520)
T ss_dssp HTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHH
T ss_pred HHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC-CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccc
Confidence 45788999999999999999999999999999999998 899999997532 368999999999999999763
No 12
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=99.55 E-value=1.2e-14 Score=102.41 Aligned_cols=71 Identities=28% Similarity=0.383 Sum_probs=63.6
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.++++++||||+++|++|+.+++++++++ |+++++||...+..|+|++||||.+++++|+..
T Consensus 312 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~ 382 (481)
T 3jz4_A 312 MSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEK-GARVVCGGKAHERGGNFFQPTILVDVPANAKVS 382 (481)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCTTCTTCBCCEEEESCCTTSGGG
T ss_pred HHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHC-CCEEEeCCcccCCCCceeccEEEecCCCCcccc
Confidence 35688999999999999999999999999999999998 899999997544468999999999999998764
No 13
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=99.55 E-value=8.7e-15 Score=103.68 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=62.2
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||...+..|+|++||||.+++++|+.-
T Consensus 328 ~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~ 397 (500)
T 2j6l_A 328 AQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKE-GGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIA 397 (500)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCSSSSSCBCCEEEESCCTTCHHH
T ss_pred hhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHC-CCEEEECCcccCCCCCEEcCEEEECCCCcChhh
Confidence 4678999999999999999999999999999999998 799999987533468999999999999998753
No 14
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=99.54 E-value=1e-14 Score=103.99 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=63.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCC-CCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDER-GERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~-~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++|||||++|++|+.+++++++++ |+++++||...+. .|+|++||||.+++++|+..
T Consensus 329 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 399 (528)
T 3u4j_A 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITS-GAELLLGGERIGREAGLYYAPTVFAGVTPDMSIA 399 (528)
T ss_dssp HHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSEECTTTSCEECCEEEESCCTTSHHH
T ss_pred HhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHC-CCEEEeCCCcCCCCCCcEecceEEecCCCCCccc
Confidence 4678999999999999999999999999999999998 8999999975433 68999999999999998763
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=99.54 E-value=9.6e-15 Score=103.50 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=62.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc-ccC--CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ-YDE--RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~-~~~--~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|||.+++++||||||++|++++.+++++++++ |+++++||. ... ..|+|++||||.+++++|+..
T Consensus 328 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 400 (497)
T 3i44_A 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDE-GATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIF 400 (497)
T ss_dssp HHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHH
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHH
Confidence 5688999999999999999999999999999999998 899999984 322 268999999999999999763
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1.2e-14 Score=102.96 Aligned_cols=69 Identities=19% Similarity=0.269 Sum_probs=61.7
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--CCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||.... ..|+|++||||++++++|+.
T Consensus 313 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i 383 (495)
T 3b4w_A 313 TALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE-GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383 (495)
T ss_dssp HHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHH
T ss_pred HhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhC-CCEEEecCcccccccCCceeCCEEecCCCCCChh
Confidence 4678999999999999999999999999999999988 899999986543 25899999999999999874
No 17
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=99.53 E-value=1.7e-14 Score=101.71 Aligned_cols=70 Identities=17% Similarity=0.176 Sum_probs=61.8
Q ss_pred CceecCCCCC-CCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEY-TDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~-~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+ ++++||||||++|++|+.+++++++++ |+++++||...+..|+|++||||++++++|+.-
T Consensus 310 ~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~ 380 (479)
T 2imp_A 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEE-GARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIM 380 (479)
T ss_dssp HTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCCCCCSSSCCCCCEEEESCCTTSGGG
T ss_pred HhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEECCcccCCCCceECCEEEeCCCCCCHHH
Confidence 5678999999 899999999999999999999999987 899999986533358999999999999998753
No 18
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=99.52 E-value=2e-14 Score=102.70 Aligned_cols=70 Identities=30% Similarity=0.462 Sum_probs=62.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+|.+++++||||||++|++|+.+++++++++ | ++++||...+..|+|++||||.+++++|+.-
T Consensus 345 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 414 (538)
T 3qan_A 345 AKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKE-G-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIM 414 (538)
T ss_dssp HTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH-S-EEEECCCEECSSSCEECCEEEESCCTTSHHH
T ss_pred HHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHC-C-eEEeCCCcCCCCCceeCCeeeecCCCCChhh
Confidence 35788999999999999999999999999999999987 7 9999997654468999999999999998753
No 19
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=99.52 E-value=1.3e-14 Score=102.95 Aligned_cols=68 Identities=24% Similarity=0.302 Sum_probs=61.8
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|||.+++++||||||++|++++.+++++++++ |+++++||.. ..|+|++||||.+++++|+..
T Consensus 336 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~ 403 (504)
T 3ek1_A 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSK-GAKLITGGKE--LGGLFFEPGILTGVTSDMLVA 403 (504)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCCE--EETTEECCEEEEEECTTSGGG
T ss_pred hhcccCCCccccCccccccCHHHHHHHHHHHHHHHHC-CCEEEeCCcc--CCCceECCeEEecCCCcChhh
Confidence 4678999999999999999999999999999999998 8999999864 358999999999999998763
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=99.52 E-value=2.2e-14 Score=101.60 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=61.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCC-cEEEeCCc-ccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPN-LEIIGGGQ-YDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~g-a~i~~gg~-~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ | +++++||. .. ..|+|++||||.+++++|+..
T Consensus 326 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~ 396 (495)
T 1wnd_A 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT-GHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIV 396 (495)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-SSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHH
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC-CCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhh
Confidence 5678999999999999999999999999999999987 8 99999986 43 258999999999999998753
No 21
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=99.52 E-value=2.4e-14 Score=100.43 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=63.1
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++||||+++|++++.+++++++++ |+++++||...+..|+|++||||.+++++|+..
T Consensus 293 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~ 362 (462)
T 3etf_A 293 AALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE-GARLLLGGEKIAGEGNYYAATVLADVTPDMTAF 362 (462)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHH
T ss_pred HhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCcccCCCCcEEeeEEEECCCCCChhh
Confidence 4678999999999999999999999999999999998 899999987544578999999999999998753
No 22
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=99.51 E-value=2.2e-14 Score=101.76 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=61.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc--C----CCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD--E----RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~--~----~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||... + ..|+|++||||.+++++|+.
T Consensus 322 ~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i 396 (503)
T 1a4s_A 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE-GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTC 396 (503)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH-TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHH
T ss_pred HhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHH
Confidence 5678999999999999999999999999999999887 79999998653 2 35899999999999999875
No 23
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=99.51 E-value=2.3e-14 Score=102.05 Aligned_cols=70 Identities=17% Similarity=0.186 Sum_probs=62.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc----CCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD----ERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~----~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++|+.+++++++++ |+++++||... ...|+|++||||++++++|+.
T Consensus 329 ~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i 402 (521)
T 4e4g_A 329 VESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQ-GAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDI 402 (521)
T ss_dssp HHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHH-TCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHH
T ss_pred HHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHC-CCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHh
Confidence 35688999999999999999999999999999999987 89999998642 146899999999999999875
No 24
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=99.50 E-value=1.8e-14 Score=101.95 Aligned_cols=69 Identities=25% Similarity=0.257 Sum_probs=59.9
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcc--cCC--CCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQY--DER--GERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~--~~~--~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||.. .+. .|+|++||||.+++++|+.
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i 388 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQ-GATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIV 388 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH-HCEEEECCC---------CCCCCCEEEESCCTTSHH
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHC-CCEEEecCccCCccccCCCceeCCEEEecCCCCcHh
Confidence 5678999999999999999999999999999999988 8999999862 222 6899999999999999875
No 25
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.49 E-value=4.8e-14 Score=99.53 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=62.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC----CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE----RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~----~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++|||||+++|++++.+++++++++ |+++++||.... ..|+|++||||++++++|+.-
T Consensus 311 ~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~ 384 (490)
T 2ve5_A 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQ-KARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIV 384 (490)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHH
T ss_pred HhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCcccccccCCCCceEccEEEecCCCCCccc
Confidence 4688999999999999999999999999999999998 899999986521 358999999999999999753
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=99.48 E-value=5.1e-14 Score=99.51 Aligned_cols=66 Identities=18% Similarity=0.263 Sum_probs=60.0
Q ss_pred eecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCC-eEeeeEEecCCCchhh
Q psy1962 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGER-VKESSDLEDLAFIARN 72 (79)
Q Consensus 5 l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~-~v~Ptil~~v~~~~~~ 72 (79)
+++|+|.+++++||||||++|++++.+++++++++ |+++++||... ..|+ |++||||++++++|+.
T Consensus 320 ~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i 386 (487)
T 2w8n_A 320 LRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSK-GATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLC 386 (487)
T ss_dssp CCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTT-TCEEEECCSBC-TTCTTCBCCEEEEEECGGGGT
T ss_pred cccCCcccccCcccCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCccC-CCCCceECCEEEecCCCcchh
Confidence 78999999999999999999999999999999987 89999998754 2589 9999999999999874
No 27
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=99.48 E-value=3.2e-14 Score=101.25 Aligned_cols=70 Identities=16% Similarity=0.264 Sum_probs=61.5
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC---CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE---RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~---~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++|||||++|++|+.+++++++++ |+++++||...+ ..|+|++||||.+++++|+..
T Consensus 317 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 389 (517)
T 3r31_A 317 EAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAE-GATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIA 389 (517)
T ss_dssp HHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHH-TCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHH
T ss_pred HhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhC-CCEEEECCccCcccCCCCceECCEEEecCCCCCccc
Confidence 4678999999999999999999999999999999998 899999993121 368999999999999998753
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=99.48 E-value=7e-14 Score=98.87 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=60.1
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+++++|||||+++|++++.+++++++++ |+++++||.. .|+|++|||| +++++|+.-
T Consensus 300 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~ 365 (486)
T 3pqa_A 300 KVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDE-GGKLLLGGKR---DKALFYPTIL-EVDRDNILC 365 (486)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCCE---ETTEECCEEE-ECCTTSGGG
T ss_pred HhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHC-CCEEEecCCC---CCcEeccEEE-eCCCCChhh
Confidence 5688999999999999999999999999999999998 8999999853 5799999999 999998753
No 29
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=99.48 E-value=6.6e-14 Score=99.52 Aligned_cols=68 Identities=13% Similarity=0.262 Sum_probs=60.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC--------CCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE--------RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~--------~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.+++++||||||++|++|+.+++++++++ |+++++||.... ..|+|++||||.+ +++|+.
T Consensus 330 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i 405 (515)
T 2d4e_A 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKRE-GARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKI 405 (515)
T ss_dssp HHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHH
T ss_pred hhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChh
Confidence 5678999999999999999999999999999999988 899999987533 2589999999999 888865
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=99.46 E-value=7e-14 Score=99.11 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=60.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCC-CeEeeeEEecCC---Cchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGE-RVKESSDLEDLA---FIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g-~~v~Ptil~~v~---~~~~~ 72 (79)
+++++|||.+++++||||||++|++|+.+++++++++ |+++++||.. .| +|++||||.+++ ++|+.
T Consensus 322 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~-Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i 391 (501)
T 1uxt_A 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK-GGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVL 391 (501)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHH
T ss_pred HhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHH
Confidence 5678999999999999999999999999999999987 8999999864 57 999999999999 88764
No 31
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=99.46 E-value=9e-14 Score=98.64 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=61.2
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++||||+++|++++.+++++++++ |+++++||.. .|+|++|||+.+++++|+..
T Consensus 319 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~ 385 (508)
T 3r64_A 319 KNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKE-GATVQVEGPI---EGRLVHPHVFSDVTSDMEIA 385 (508)
T ss_dssp HTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTT-TCEEEECCCE---ETTEECCEEEEEECTTSGGG
T ss_pred HhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHc-CCEEEecCCC---CCcEEecEEEecCCCCChhh
Confidence 4678999999999999999999999999999999998 8999999864 58999999999999998764
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=99.46 E-value=1e-13 Score=97.91 Aligned_cols=70 Identities=16% Similarity=0.240 Sum_probs=61.5
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-CCCCCeEeeeEEecCCCchhh
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-ERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-~~~g~~v~Ptil~~v~~~~~~ 72 (79)
++++++|+|.+++++|||||+++|++|+.+++++++++ |+++++||... ...|+|++||||++++++|+.
T Consensus 307 ~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~ 377 (486)
T 1t90_A 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEE-GARLVCDGRENVSDDGYFVGPTIFDNVTTEMTI 377 (486)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH-TCEEEECSSSSCCSSSSCCCCEEEESCCTTSHH
T ss_pred HHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCccCCCCCCCEECCEEEeCCCCCCHh
Confidence 35688999999999999999999999999999999887 89999998632 235899999999999999865
No 33
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=99.46 E-value=9.2e-14 Score=98.64 Aligned_cols=66 Identities=26% Similarity=0.380 Sum_probs=60.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|||. ++++|||||+++|++++.+++++++++ |+++++||. ..|+|++||||++++++|+..
T Consensus 318 ~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~-Ga~v~~gG~---~~g~~~~PTvl~~v~~~~~i~ 383 (505)
T 3prl_A 318 EQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALEN-GATLLSGNK---RQGNLLSPTLLDDVTPAMRVA 383 (505)
T ss_dssp HHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCC---EETTEECCEEEESCCTTSGGG
T ss_pred HhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHC-CCEEEecCC---CCCceeCCeEeecCCCCChhh
Confidence 467899999 899999999999999999999999998 899999986 258999999999999998763
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=99.46 E-value=9.6e-14 Score=98.65 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=60.1
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
++++++|+| +++++||||||++|++++.+++++++++ | ++++||......|+|++||||++++++|+..
T Consensus 346 ~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~-G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~ 414 (516)
T 1uzb_A 346 AERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNE-G-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIA 414 (516)
T ss_dssp HTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTT-S-EEEECCSBCSSSSCCBCCEEEESCCTTSGGG
T ss_pred HHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHC-C-CEEECCccCCCCCcEECCEEEECCCCCCHhh
Confidence 357889999 9999999999999999999999999987 6 8888886532358999999999999998753
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=99.46 E-value=9.5e-14 Score=97.77 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=61.0
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-C--CCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-E--RGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-~--~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.++++++||||+++|++++.+++++++++ |+++++||... . ..|+|++|||+.+++++|+.
T Consensus 307 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~ 378 (478)
T 3ty7_A 307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEE-GAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTI 378 (478)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH-TCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHH
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHC-CCEEEecCccCccccCCCceeCCEEEecCCCCCcc
Confidence 4688999999999999999999999999999999887 89999998422 1 36899999999999999875
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=99.46 E-value=1.2e-13 Score=97.37 Aligned_cols=66 Identities=17% Similarity=0.240 Sum_probs=60.7
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+|.++++++||+|+++|++++.+++++++++ |+++++||.. .|+|++||||.+++++|+.
T Consensus 312 ~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i 377 (485)
T 4dng_A 312 KQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTD-GIELAVEGKR---VGNVLTPYVFVGADNNSKI 377 (485)
T ss_dssp HHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCCE---ETTEECCEEEESCCTTSHH
T ss_pred HhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCCC---CCcEECCEEEecCCCCChh
Confidence 4678999999999999999999999999999999998 8999999864 5899999999999999875
No 37
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=99.45 E-value=1.4e-13 Score=97.33 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=60.9
Q ss_pred CceecCC-CCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhh
Q psy1962 3 DKLKIGD-VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARN 72 (79)
Q Consensus 3 ~~l~~Gd-p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~ 72 (79)
+++++|+ |.+++++|||||+++|++++.+++++++++ |+++++||...+..|+|++||||. ++++|+.
T Consensus 308 ~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i 376 (490)
T 3ju8_A 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGK-GAQPLLAMTQPIDGAALLTPGILD-VSAVAER 376 (490)
T ss_dssp HHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHT-TCEEEECCCCCSTTSCCCCCEEEE-CTTCSSC
T ss_pred HhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHC-CCEEEECCCccCCCCCEEccEEEE-eCCCCcc
Confidence 4578999 999999999999999999999999999998 899999986544578999999999 9999875
No 38
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=99.43 E-value=2.1e-13 Score=97.22 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=58.0
Q ss_pred CCceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc-----C-CCCCeEeeeEEecCCCch
Q psy1962 2 LDKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD-----E-RGERVKESSDLEDLAFIA 70 (79)
Q Consensus 2 ~~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~-----~-~~g~~v~Ptil~~v~~~~ 70 (79)
++++++|||.+++++||||||++|++|+.++++++ .+ |+++++||... + ..|+|++||||+++++++
T Consensus 323 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~-ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 395 (534)
T 2y53_A 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-RE-EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDN 395 (534)
T ss_dssp HTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HT-SSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGG
T ss_pred HHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-Hc-CCEEEECCcccccccccCCCCceecCEEEEecCccc
Confidence 45788999999999999999999999999999999 55 79999988632 1 358999999999999874
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=99.43 E-value=9.2e-14 Score=97.82 Aligned_cols=70 Identities=19% Similarity=0.203 Sum_probs=62.7
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccC-CCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDE-RGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~-~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++||+|+++|++++.++++++.++ |++++.||...+ ..|+|++|||+++++++|+..
T Consensus 291 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~ 361 (474)
T 4h7n_A 291 HRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEK-GAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVM 361 (474)
T ss_dssp HHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHT-TCEEEECCCCEEETTEEECCCEEEESCCTTSGGG
T ss_pred hccccCCCcccccccCccccHHHHHHHHHHHHHHHhh-CceeccCCcccccCCCcccCceeEEeeccccccc
Confidence 4678999999999999999999999999999999998 899999986543 468999999999999999864
No 40
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=99.43 E-value=1.3e-13 Score=97.10 Aligned_cols=66 Identities=20% Similarity=0.168 Sum_probs=59.4
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.+ +++||||||++|++++.+++++++++ |+++++||.. .|+|++||||.+++++|+.-
T Consensus 309 ~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~ 374 (475)
T 1euh_A 309 LALTIGNPED-DADITPLIDTKSADYVEGLINDANDK-GATALTEIKR---EGNLICPILFDKVTTDMRLA 374 (475)
T ss_dssp HTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHT-TCEECSCCCE---ETTEECCEEEESCCTTSGGG
T ss_pred HhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHC-CCEEEeCCcc---CCceeCCEEEeCCCCcCHHH
Confidence 5678999999 99999999999999999999999987 8999998864 48999999999999998753
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=99.39 E-value=3.2e-13 Score=102.22 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=61.3
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+++++|+|.++++++||||+++|++++.++|++++++ | ++++||..++..|+|++||||.+++++|+..
T Consensus 840 ~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~-G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~ 908 (1026)
T 4f9i_A 840 KATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKRE-G-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIA 908 (1026)
T ss_dssp HHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHH-S-EEEEECCCCSSSSCCCCCEEEESCCTTSGGG
T ss_pred HhcccCCcccccCccccccCHHHHHHHHHHHHHHHhC-C-eEEecCCcCCCCCceecceeeecCCCCcccc
Confidence 5688999999999999999999999999999999987 6 8888886544458999999999999998763
No 42
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=99.24 E-value=1.4e-11 Score=86.81 Aligned_cols=60 Identities=22% Similarity=0.289 Sum_probs=53.2
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 7 IGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 7 ~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
+|+|.++++++|||||++|++|+.+++ + |+++++||..+ ..|+|++||||++++++|+..
T Consensus 288 ~g~~~~~~~~~gpli~~~~~~rv~~~i-----~-ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~ 347 (469)
T 3sza_A 288 YGEDAKKSRDYGRIISARHFQRVMGLI-----E-GQKVAYGGTGD-AATRYIAPTILTDVDPQSPVM 347 (469)
T ss_dssp HCSCGGGCTTCCCCSCHHHHHHHHHHH-----T-TSEEEECCCEE-TTTTEECCEEEESCCTTSGGG
T ss_pred cCCCCcccCcccccCCHHHHHHHHHHH-----c-CCEEEeCCccC-CCCceeCCeeecCCCCcchhh
Confidence 589988999999999999999999998 3 78999999754 368999999999999999864
No 43
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=99.01 E-value=2.9e-10 Score=86.12 Aligned_cols=59 Identities=24% Similarity=0.211 Sum_probs=51.6
Q ss_pred CceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEec
Q psy1962 3 DKLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLED 65 (79)
Q Consensus 3 ~~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~ 65 (79)
+++++|+|.++++++||||++.|++++.+++++++++ | ++ +||..+ ..|+|++|||+++
T Consensus 819 ~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~-g-~v-~gg~~~-~~G~fv~PTvl~~ 877 (1001)
T 3haz_A 819 RELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE-A-RL-HFAGPA-PEGCFVAPHIFEL 877 (1001)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH-S-EE-EEECCC-CSSSCCCCEEEEC
T ss_pred HhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc-C-eE-eccccC-CCCcEEeeEEecC
Confidence 5688999999999999999999999999999999886 5 77 777643 3589999999985
No 44
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=98.88 E-value=2.9e-09 Score=74.62 Aligned_cols=57 Identities=12% Similarity=0.261 Sum_probs=48.0
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCchhhc
Q psy1962 10 VEYTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFIARNT 73 (79)
Q Consensus 10 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~~~~~ 73 (79)
|.++ +||||||++|++|+.++++++ ++++++||..+ ..|+|++|||+++++++|+.-
T Consensus 299 p~~~--~~gpli~~~~~~rv~~~i~~a----~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~ 355 (457)
T 3lns_A 299 PEIN--STGKLVTERQVQRLVSLLEAT----QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLM 355 (457)
T ss_dssp CSTT--TTCCCSSHHHHHHHHHHHHHC----CSEEEECCCEE-GGGTEECCEEEESCCTTSGGG
T ss_pred CCcc--cccCCCCHHHHHHHHHHHHhc----CCeEEeCCccC-CCCceeCCEEEecCCCCChhh
Confidence 5555 799999999999999999985 25899998653 358999999999999998763
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=98.02 E-value=4.4e-06 Score=59.25 Aligned_cols=49 Identities=6% Similarity=-0.031 Sum_probs=41.6
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCc
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFI 69 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~ 69 (79)
.||++++.+.+++.++++++.++.|+++++||. .|+|++||||.+++++
T Consensus 319 ~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~ 367 (510)
T 1ez0_A 319 PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSEN 367 (510)
T ss_dssp CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCc
Confidence 589999999999999999988423799999986 2899999999987666
No 46
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=97.97 E-value=2.3e-06 Score=60.96 Aligned_cols=49 Identities=10% Similarity=0.020 Sum_probs=40.9
Q ss_pred CCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCcccCCCCCeEeeeEEecCCCc
Q psy1962 14 DSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYDERGERVKESSDLEDLAFI 69 (79)
Q Consensus 14 ~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~~~~g~~v~Ptil~~v~~~ 69 (79)
++.+||++++++.+++.++++ ++ |+++++||.. .|+|++||||.+++++
T Consensus 354 ~~~~gp~~~~~~~~~v~~~~~---~~-Ga~v~~gG~~---~g~~~~PTvl~~~~~~ 402 (528)
T 3v4c_A 354 QTMLTDGIAKAYRDGQARFAT---RN-AVKPLLATES---SGRDASPNLFETTGAQ 402 (528)
T ss_dssp EECSCHHHHHHHHHHHHHHHT---CT-TCEEEECCCC---CTTEECCEEEEEEHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH---hC-CCEEEeCCCc---CCceeccEEEEecCcc
Confidence 456999999999999888864 34 7999999863 6899999999988776
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=97.11 E-value=1.1e-05 Score=56.48 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=41.7
Q ss_pred ccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc---CCCCCeEeeeE-------EecCCCchhhc
Q psy1962 17 AGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD---ERGERVKESSD-------LEDLAFIARNT 73 (79)
Q Consensus 17 ~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~---~~~g~~v~Pti-------l~~v~~~~~~~ 73 (79)
+||+++++|++++.++++.+... |+++ +|+... ...|+|++||+ +++++++++..
T Consensus 270 ~gpli~~~~~~~v~~~i~~~~~~-~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~ 334 (452)
T 3my7_A 270 KAHVLSKTDADKVRKVLLIDGAL-NAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFA 334 (452)
T ss_dssp TEEECCHHHHHHHHHHHEETTEE-CGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGG
T ss_pred CCCcCCHHHHHHHHHHHHhhccc-CCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhh
Confidence 69999999999999999865554 5666 465432 13589999997 67888887754
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=96.95 E-value=1.8e-05 Score=55.53 Aligned_cols=45 Identities=9% Similarity=0.151 Sum_probs=38.6
Q ss_pred ceecCCCC-CCCCcccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCc
Q psy1962 4 KLKIGDVE-YTDSFAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQ 49 (79)
Q Consensus 4 ~l~~Gdp~-~~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~ 49 (79)
++++|+|. ++++++||+|+.++++++.++++.+..+ |+++++||.
T Consensus 284 ~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~-ga~vl~gg~ 329 (464)
T 3k9d_A 284 AVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPA-DARVLIAEE 329 (464)
T ss_dssp HHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCT-TCCEEEEEC
T ss_pred hhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcC-CCEEEEcCC
Confidence 45678887 6788899999999999999999988877 799998874
No 49
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=39.59 E-value=39 Score=24.04 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=29.2
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcEEEeCCccc
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGGQYD 51 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg~~~ 51 (79)
.+.|++.....+++.+.+.++.. |.|=++.||.|-
T Consensus 54 ~~PPLV~a~Ei~~Lr~~La~va~-G~AFlLQGGDCA 88 (462)
T 3rzi_A 54 SVPPVTVPSEIVRLQEQLAQVAK-GEAFLLQGGDCA 88 (462)
T ss_dssp TSCCSSCHHHHHHHHHHHHHHHT-TSCEEEEEECSS
T ss_pred cCCCcCCHHHHHHHHHHHHHHHC-CCEEEEeCcccc
Confidence 37899999999999999987765 467788899764
No 50
>2ikf_A RNA uridylyl transferase; tutase, nucleotidyltransferase, UTP-binding, RNA editing; HET: UTP; 2.00A {Trypanosoma brucei} PDB: 2nom_A* 2q0c_A* 2q0d_A* 2q0e_A* 2q0f_A* 2q0g_A*
Probab=34.67 E-value=60 Score=21.61 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=30.3
Q ss_pred ceecCCCCCCCCcccccCCHHHHHHHHHHHHHHhh
Q psy1962 4 KLKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAKS 38 (79)
Q Consensus 4 ~l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 38 (79)
.+.+-||.+++.+.|.-++...++++...++.|.+
T Consensus 312 ~l~IeDP~~~~~N~~r~v~~~~~~~i~~~f~~A~~ 346 (353)
T 2ikf_A 312 QWCIEDPYELNLNVGRNVTPLKRDFLRRHLEKARD 346 (353)
T ss_dssp SSEEBCSSSTTCBTTTTCCHHHHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 35677999998889999999999999999988865
No 51
>4fh3_A Poly(A) RNA polymerase protein CID1; nucleotidyltransferase, poly(U) polymerase, transferase; 2.00A {Schizosaccharomyces pombe} PDB: 4fh5_A* 4fhp_A* 4fhv_A* 4fhw_A* 4fhy_A* 4fhx_A* 4ep7_A*
Probab=28.77 E-value=79 Score=20.69 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=27.7
Q ss_pred eecCCCCCCCCcccccCCHHHHHHHHHHHHHHh
Q psy1962 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAK 37 (79)
Q Consensus 5 l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 37 (79)
|.+-||.+++...|.-++...+.+|...+..|.
T Consensus 298 l~IeDPf~~~~Nvar~Vs~~~~~~I~~eF~~A~ 330 (349)
T 4fh3_A 298 LAIEDPFEISHNVGRTVSSSGLYRIRGEFMAAS 330 (349)
T ss_dssp SCBBCSSSTTCBGGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 556799998888999999999999988877664
No 52
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=24.04 E-value=1.1e+02 Score=17.33 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=25.1
Q ss_pred cccccCCHHHHHHHHHHHHHHhhCCCcEEEeCC
Q psy1962 16 FAGAVIDKKAFDRITGYIKHAKSSPNLEIIGGG 48 (79)
Q Consensus 16 ~~Gpli~~~~~~rv~~~i~~a~~~~ga~i~~gg 48 (79)
.--|+.++.-.+++.+++..|... | ++..|-
T Consensus 6 ~a~p~a~~~l~~kil~~L~lA~ka-g-klv~G~ 36 (122)
T 3o85_A 6 RAIPFANEELSLELLNLVKHGASL-Q-AIKRGA 36 (122)
T ss_dssp TSCSBCCHHHHHHHHHHHHHHHHT-T-CEEESH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHh-C-CEeEcH
Confidence 346899999999999999999886 3 576664
No 53
>4e8f_A Poly(A) RNA polymerase protein CID1; beta polymerase-like nucleotidyl transferase, terminal uridi transferase, UTP, cytoplasmic; 2.60A {Schizosaccharomyces pombe 972h-} PDB: 4e7x_A* 4e80_A
Probab=22.60 E-value=1.2e+02 Score=20.64 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.3
Q ss_pred eecCCCCCCCCcccccCCHHHHHHHHHHHHHHh
Q psy1962 5 LKIGDVEYTDSFAGAVIDKKAFDRITGYIKHAK 37 (79)
Q Consensus 5 l~~Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 37 (79)
|-+-||.+.+.++|.-++...+.+|...+..|.
T Consensus 326 L~IeDPf~~~~Nv~r~vs~~~~~~I~~eF~rA~ 358 (405)
T 4e8f_A 326 LAIEDPFEISHNVGRTVSSSGLYRIRGEFMAAS 358 (405)
T ss_dssp SEEBCSSSTTCBTTTTCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCcccccccCCCHHHHHHHHHHHHHHH
Confidence 567799998888999999999999988887764
No 54
>3omy_A Protein TRAM; DNA binding protein, dimer, bacterial conjugation, ribbon-HE helix, transcriptional repressor, DNA; 1.30A {Escherichia coli} SCOP: a.55.1.0
Probab=21.28 E-value=88 Score=15.42 Aligned_cols=23 Identities=13% Similarity=0.430 Sum_probs=19.0
Q ss_pred ccCCHHHHHHHHHHHHHHhhCCCc
Q psy1962 19 AVIDKKAFDRITGYIKHAKSSPNL 42 (79)
Q Consensus 19 pli~~~~~~rv~~~i~~a~~~~ga 42 (79)
--++.+-++++..+++.-+.+ ||
T Consensus 6 ~Y~s~~v~~~I~~iVe~r~qe-GA 28 (52)
T 3omy_A 6 TYVNNNVYEQITDLVTIRKQE-GI 28 (52)
T ss_dssp CCCCHHHHHHHHHHHHHHHHT-TC
T ss_pred eeechHHHHHHHHHHHHHHHc-Cc
Confidence 357888899999999988887 66
Done!