Query psy1963
Match_columns 250
No_of_seqs 196 out of 2040
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 20:44:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m3h_A OPRT, oprtase, orotate 100.0 6.8E-46 2.3E-50 317.1 24.6 207 3-231 20-233 (234)
2 3dez_A OPRT, oprtase, orotate 100.0 2.5E-45 8.6E-50 315.0 25.3 204 5-230 35-242 (243)
3 2wns_A Orotate phosphoribosylt 100.0 6.5E-43 2.2E-47 293.9 23.4 198 8-227 3-200 (205)
4 3mjd_A Orotate phosphoribosylt 100.0 5.6E-43 1.9E-47 298.5 20.5 197 6-227 21-231 (232)
5 3n2l_A OPRT, oprtase, orotate 100.0 1.4E-42 4.7E-47 296.6 19.3 197 6-227 28-237 (238)
6 1lh0_A OMP synthase; loop clos 100.0 3.6E-40 1.2E-44 278.7 19.8 197 6-227 3-212 (213)
7 2aee_A OPRT, oprtase, orotate 100.0 3.6E-39 1.2E-43 272.2 24.8 204 6-231 4-211 (211)
8 3qw4_B UMP synthase; N-termina 100.0 1.5E-39 5E-44 301.9 23.5 194 8-225 259-452 (453)
9 2ps1_A Orotate phosphoribosylt 100.0 1.4E-38 4.9E-43 271.2 21.2 198 6-228 7-224 (226)
10 2yzk_A OPRT, oprtase, orotate 100.0 3.9E-37 1.3E-41 253.3 18.3 175 11-209 2-177 (178)
11 2p1z_A Phosphoribosyltransfera 100.0 1.9E-35 6.5E-40 243.6 13.2 170 8-202 7-178 (180)
12 1y0b_A Xanthine phosphoribosyl 99.9 2E-26 7E-31 191.9 16.6 182 6-202 2-185 (197)
13 1qb7_A APRT, adenine phosphori 99.9 1.8E-26 6.1E-31 197.6 15.5 165 24-201 31-208 (236)
14 2dy0_A APRT, adenine phosphori 99.9 3.1E-26 1.1E-30 189.9 14.9 169 15-199 17-188 (190)
15 1o57_A PUR operon repressor; p 99.9 1.6E-24 5.5E-29 190.7 14.9 175 5-201 81-255 (291)
16 1zn8_A APRT, adenine phosphori 99.9 3.2E-24 1.1E-28 176.1 15.0 167 16-198 9-179 (180)
17 1g2q_A Adenine phosphoribosylt 99.9 2.9E-24 1E-28 177.6 14.2 173 10-200 5-182 (187)
18 1l1q_A Adenine phosphoribosylt 99.9 8.5E-23 2.9E-27 168.6 15.7 162 19-196 11-178 (186)
19 1vch_A Phosphoribosyltransfera 99.9 1.5E-22 5E-27 165.3 13.5 156 22-198 14-172 (175)
20 1wd5_A Hypothetical protein TT 99.8 1.3E-19 4.6E-24 151.9 12.9 168 52-224 8-204 (208)
21 1hgx_A HGXPRTASE, hypoxanthine 99.7 1E-17 3.5E-22 137.6 11.4 131 33-179 3-136 (183)
22 3dah_A Ribose-phosphate pyroph 99.7 5.7E-17 2E-21 143.8 14.0 158 7-194 113-273 (319)
23 1u9y_A RPPK;, ribose-phosphate 99.7 2E-17 7E-22 144.9 10.5 155 7-191 104-259 (284)
24 2ywu_A Hypoxanthine-guanine ph 99.7 8.7E-17 3E-21 132.1 13.1 130 30-179 2-136 (181)
25 2ji4_A Phosphoribosyl pyrophos 99.7 1E-16 3.5E-21 145.5 13.9 180 8-196 137-331 (379)
26 3s5j_B Ribose-phosphate pyroph 99.7 1.6E-16 5.6E-21 141.1 14.7 162 7-196 108-272 (326)
27 1vdm_A Purine phosphoribosyltr 99.7 2.4E-16 8.2E-21 125.5 14.1 116 46-179 7-124 (153)
28 3hvu_A Hypoxanthine phosphorib 99.7 1.7E-16 5.8E-21 132.6 13.7 134 25-179 19-157 (204)
29 1pzm_A HGPRT, hypoxanthine-gua 99.7 1.2E-16 4.3E-21 134.2 12.0 131 35-180 18-160 (211)
30 3o7m_A Hypoxanthine phosphorib 99.7 3.2E-16 1.1E-20 129.2 13.6 124 39-179 7-135 (186)
31 3lrt_A Ribose-phosphate pyroph 99.7 5.9E-16 2E-20 135.5 15.2 155 7-193 103-258 (286)
32 1fsg_A HGPRTASE, hypoxanthine- 99.7 1.5E-16 5.1E-21 135.6 10.5 138 20-179 29-183 (233)
33 2geb_A Hypoxanthine-guanine ph 99.7 4.6E-16 1.6E-20 128.1 12.8 121 42-179 14-139 (185)
34 2jbh_A Phosphoribosyltransfera 99.7 9E-16 3.1E-20 130.2 12.8 136 22-179 25-175 (225)
35 1tc1_A Protein (hypoxanthine p 99.7 2E-15 6.9E-20 127.6 14.6 124 39-179 6-144 (220)
36 1dku_A Protein (phosphoribosyl 99.7 1.6E-15 5.3E-20 134.8 14.5 154 7-190 114-270 (317)
37 1yfz_A Hypoxanthine-guanine ph 99.6 6.5E-16 2.2E-20 129.1 11.2 120 43-179 35-159 (205)
38 1a3c_A PYRR, pyrimidine operon 99.6 6.2E-16 2.1E-20 126.6 10.5 128 40-178 3-139 (181)
39 3ohp_A Hypoxanthine phosphorib 99.6 5.2E-15 1.8E-19 121.0 13.9 117 46-179 10-132 (177)
40 1z7g_A HGPRT, HGPRTASE, hypoxa 99.6 6.6E-15 2.2E-19 124.2 13.0 140 37-197 28-182 (217)
41 1w30_A PYRR bifunctional prote 99.6 6.7E-15 2.3E-19 122.7 12.2 131 34-178 7-153 (201)
42 1nul_A XPRT, xanthine-guanine 99.6 3.9E-15 1.3E-19 118.8 9.8 111 44-179 6-117 (152)
43 3ozf_A Hypoxanthine-guanine-xa 99.6 1.1E-14 3.6E-19 125.0 11.4 126 36-179 55-197 (250)
44 1ufr_A TT1027, PYR mRNA-bindin 99.6 8E-15 2.7E-19 120.1 10.1 120 46-178 9-137 (181)
45 2xbu_A Hypoxanthine-guanine ph 99.5 1.5E-13 5.2E-18 116.1 10.9 124 46-178 10-160 (221)
46 1ecf_A Glutamine phosphoribosy 99.5 1.1E-12 3.7E-17 123.4 16.0 150 49-207 274-448 (504)
47 3acd_A Hypoxanthine-guanine ph 99.4 1.6E-12 5.5E-17 106.5 13.4 121 43-178 12-135 (181)
48 1ao0_A Glutamine phosphoribosy 99.4 3.1E-12 1.1E-16 119.0 14.1 148 49-207 258-427 (459)
49 1dqn_A Guanine phosphoribosylt 99.2 1.9E-11 6.6E-16 103.7 8.5 113 46-179 37-154 (230)
50 1i5e_A Uracil phosphoribosyltr 98.9 4.3E-09 1.5E-13 88.0 9.5 103 68-189 71-174 (209)
51 1o5o_A Uracil phosphoribosyltr 98.9 5E-09 1.7E-13 88.1 9.5 102 69-189 84-186 (221)
52 2e55_A Uracil phosphoribosyltr 98.7 9E-08 3.1E-12 79.8 11.4 98 69-188 70-170 (208)
53 2ehj_A Uracil phosphoribosyltr 98.7 8.7E-08 3E-12 79.9 10.5 99 69-188 71-172 (208)
54 1v9s_A Uracil phosphoribosyltr 98.6 6.5E-08 2.2E-12 80.6 7.9 101 69-188 71-172 (208)
55 1bd3_D Uprtase, uracil phospho 98.6 2.4E-07 8.2E-12 78.9 9.2 98 70-188 105-207 (243)
56 3dmp_A Uracil phosphoribosyltr 98.4 8.4E-07 2.9E-11 74.3 9.3 105 69-194 79-188 (217)
57 1xtt_A Probable uracil phospho 98.3 4.2E-06 1.4E-10 70.0 10.0 108 69-194 73-190 (216)
58 2l69_A Rossmann 2X3 fold prote 77.8 9.1 0.00031 27.2 6.8 61 141-207 55-119 (134)
59 3iwh_A Rhodanese-like domain p 63.0 12 0.00042 26.4 4.9 50 135-194 53-102 (103)
60 1u9y_A RPPK;, ribose-phosphate 58.1 45 0.0015 28.1 8.5 75 77-173 8-85 (284)
61 1r6j_A Syntenin 1; PDZ, membra 57.9 13 0.00045 25.3 4.1 37 135-171 41-77 (82)
62 3dah_A Ribose-phosphate pyroph 57.6 57 0.0019 28.2 9.1 77 76-174 14-94 (319)
63 3s5j_B Ribose-phosphate pyroph 49.9 65 0.0022 27.9 8.2 76 77-174 11-90 (326)
64 3av3_A Phosphoribosylglycinami 47.2 90 0.0031 25.0 8.3 49 147-197 10-61 (212)
65 3p9x_A Phosphoribosylglycinami 46.0 62 0.0021 26.1 7.1 47 150-196 12-59 (211)
66 2ywr_A Phosphoribosylglycinami 45.1 88 0.003 25.1 7.9 48 149-196 10-58 (216)
67 3kcq_A Phosphoribosylglycinami 44.8 69 0.0023 25.9 7.2 68 139-208 9-81 (215)
68 3ilm_A ALR3790 protein; rhodan 44.7 50 0.0017 24.4 6.0 53 135-196 53-105 (141)
69 2xf7_A GP23.1; viral protein; 44.4 15 0.00051 22.3 2.2 26 198-223 20-45 (51)
70 3f6p_A Transcriptional regulat 44.3 71 0.0024 21.8 6.6 27 139-168 3-29 (120)
71 4ds3_A Phosphoribosylglycinami 44.1 79 0.0027 25.4 7.4 55 140-196 9-64 (209)
72 3eod_A Protein HNR; response r 43.5 69 0.0024 22.1 6.4 29 137-168 6-34 (130)
73 3hix_A ALR3790 protein; rhodan 42.7 57 0.0019 22.6 5.7 51 136-195 50-100 (106)
74 3da8_A Probable 5'-phosphoribo 41.7 62 0.0021 26.2 6.4 46 149-195 21-66 (215)
75 3foj_A Uncharacterized protein 41.3 66 0.0023 21.8 5.8 29 135-166 53-81 (100)
76 3uw1_A Ribose-5-phosphate isom 38.9 13 0.00044 31.0 1.8 46 148-196 38-83 (239)
77 3to5_A CHEY homolog; alpha(5)b 38.7 26 0.0009 25.9 3.5 30 136-168 10-39 (134)
78 3tqr_A Phosphoribosylglycinami 38.5 1.2E+02 0.0042 24.4 7.8 47 149-196 14-61 (215)
79 3aek_B Light-independent proto 38.5 69 0.0024 29.5 7.0 71 134-208 276-348 (525)
80 3s2u_A UDP-N-acetylglucosamine 38.0 54 0.0019 28.2 6.0 49 139-195 3-57 (365)
81 3gge_A PDZ domain-containing p 37.6 47 0.0016 23.3 4.4 45 133-177 45-89 (95)
82 1meo_A Phosophoribosylglycinam 36.1 98 0.0033 24.8 6.8 46 149-196 9-57 (209)
83 1vp8_A Hypothetical protein AF 36.0 33 0.0011 27.7 3.7 69 139-212 45-123 (201)
84 3gl9_A Response regulator; bet 35.6 63 0.0021 22.3 5.0 27 139-168 3-29 (122)
85 3e17_A Tight junction protein 35.3 57 0.002 21.8 4.6 34 135-168 40-73 (88)
86 3kwm_A Ribose-5-phosphate isom 35.2 26 0.00089 28.8 3.1 45 148-195 32-76 (224)
87 2o3i_A Hypothetical protein; N 35.0 44 0.0015 29.9 4.8 44 53-96 86-131 (405)
88 4hwg_A UDP-N-acetylglucosamine 35.0 78 0.0027 27.7 6.5 47 48-96 77-123 (385)
89 3s2e_A Zinc-containing alcohol 34.6 1.2E+02 0.0042 25.5 7.6 50 135-192 164-213 (340)
90 1i16_A Interleukin 16, LCF; cy 34.1 40 0.0014 24.5 3.8 40 134-173 75-114 (130)
91 1wi4_A Synip, syntaxin binding 34.1 42 0.0014 23.6 3.8 31 135-165 60-90 (109)
92 2ji4_A Phosphoribosyl pyrophos 33.0 81 0.0028 27.8 6.3 73 79-173 39-118 (379)
93 2d92_A INAD-like protein; PDZ 32.6 89 0.003 21.6 5.4 34 135-168 63-96 (108)
94 3o46_A Maguk P55 subfamily mem 32.0 64 0.0022 21.6 4.4 32 135-166 47-78 (93)
95 3l7o_A Ribose-5-phosphate isom 32.0 20 0.00067 29.5 1.9 45 148-196 24-72 (225)
96 3h5i_A Response regulator/sens 31.5 72 0.0025 22.5 4.9 28 137-167 4-31 (140)
97 3lrt_A Ribose-phosphate pyroph 31.4 1E+02 0.0035 26.0 6.4 72 79-174 10-85 (286)
98 3fio_A A cystathionine beta-sy 31.1 53 0.0018 20.2 3.6 46 148-208 5-50 (70)
99 4a2c_A Galactitol-1-phosphate 30.8 1.8E+02 0.006 24.4 8.0 50 135-191 158-207 (346)
100 3n2n_F Anthrax toxin receptor 30.2 58 0.002 24.5 4.4 66 139-205 108-177 (185)
101 3auf_A Glycinamide ribonucleot 30.1 2.1E+02 0.0072 23.1 8.0 56 139-196 23-79 (229)
102 1jkx_A GART;, phosphoribosylgl 29.4 1.4E+02 0.0047 23.9 6.6 46 149-196 9-57 (212)
103 1f2v_A COBH, precorrin-8X meth 29.3 1.3E+02 0.0043 24.6 6.3 42 58-99 155-200 (219)
104 3b76_A E3 ubiquitin-protein li 29.1 79 0.0027 22.6 4.7 34 135-168 72-105 (118)
105 2jtq_A Phage shock protein E; 29.1 85 0.0029 20.5 4.6 31 136-169 39-69 (85)
106 3uog_A Alcohol dehydrogenase; 28.8 2.1E+02 0.007 24.4 8.2 49 135-191 187-235 (363)
107 3lte_A Response regulator; str 28.7 88 0.003 21.5 4.9 28 137-167 5-32 (132)
108 3ghd_A A cystathionine beta-sy 28.4 67 0.0023 20.6 3.8 45 148-207 5-49 (70)
109 1kol_A Formaldehyde dehydrogen 27.9 1.7E+02 0.0059 25.1 7.6 51 135-192 183-233 (398)
110 3egg_C Spinophilin; PP1, serin 27.0 86 0.003 24.1 4.8 36 133-168 128-163 (170)
111 3m6m_D Sensory/regulatory prot 27.0 1.5E+02 0.0051 20.9 6.0 28 137-167 13-40 (143)
112 2afr_A Cobalamin biosynthesis 26.5 1.3E+02 0.0045 24.7 5.9 52 44-99 140-199 (231)
113 3gqv_A Enoyl reductase; medium 26.1 2.7E+02 0.0093 23.7 8.5 48 136-191 163-210 (371)
114 2iwo_A Multiple PDZ domain pro 26.1 1E+02 0.0035 22.0 4.8 34 134-167 71-104 (120)
115 1a5t_A Delta prime, HOLB; zinc 25.9 2E+02 0.0069 24.2 7.5 83 137-221 107-192 (334)
116 2bw0_A 10-FTHFDH, 10-formyltet 25.8 2.5E+02 0.0084 24.1 8.0 55 139-198 23-81 (329)
117 3mvn_A UDP-N-acetylmuramate:L- 25.7 88 0.003 23.6 4.6 24 140-163 36-59 (163)
118 2vn2_A DNAD, chromosome replic 25.6 1.5E+02 0.0053 21.3 5.8 53 1-60 61-113 (128)
119 1ijb_A VON willebrand factor; 25.6 1.4E+02 0.0049 22.9 6.0 67 139-205 117-188 (202)
120 3grc_A Sensor protein, kinase; 25.3 1.7E+02 0.0058 20.2 6.9 27 138-167 6-32 (140)
121 3r68_A Na(+)/H(+) exchange reg 25.1 86 0.003 20.9 4.1 35 135-169 47-81 (95)
122 3gt7_A Sensor protein; structu 24.9 1.1E+02 0.0037 22.0 4.9 12 138-149 7-18 (154)
123 4eez_A Alcohol dehydrogenase 1 24.8 2.7E+02 0.0092 23.2 8.1 49 135-191 161-210 (348)
124 2yx6_A Hypothetical protein PH 24.6 1.1E+02 0.0038 21.7 4.8 49 156-207 54-104 (121)
125 4hqf_A Thrombospondin-related 24.3 2.9E+02 0.0098 22.4 8.2 68 139-206 130-203 (281)
126 3e7d_A COBH, precorrin-8X meth 24.0 1.8E+02 0.0062 23.5 6.3 53 43-99 137-193 (212)
127 3eme_A Rhodanese-like domain p 24.0 1.3E+02 0.0046 20.3 5.0 48 135-192 53-100 (103)
128 1dku_A Protein (phosphoribosyl 23.9 3.3E+02 0.011 23.0 9.7 77 76-174 16-96 (317)
129 4b79_A PA4098, probable short- 23.8 1.1E+02 0.0036 25.2 5.0 33 136-178 9-44 (242)
130 1sxj_A Activator 1 95 kDa subu 23.7 4E+02 0.014 23.9 10.7 57 41-97 39-109 (516)
131 1ou0_A Precorrin-8X methylmuta 23.7 94 0.0032 25.1 4.5 52 44-99 135-188 (207)
132 4g81_D Putative hexonate dehyd 23.6 65 0.0022 26.6 3.7 51 136-196 7-64 (255)
133 1apy_A Aspartylglucosaminidase 23.5 1.6E+02 0.0056 22.7 5.7 54 194-248 102-160 (162)
134 2fz5_A Flavodoxin; alpha/beta 23.4 1.9E+02 0.0065 20.2 6.0 39 136-174 78-117 (137)
135 1g9o_A NHE-RF; PDZ domain, com 23.3 1.2E+02 0.0041 19.9 4.5 34 135-168 45-78 (91)
136 2byg_A Channel associated prot 23.2 1.2E+02 0.0041 21.4 4.7 33 135-167 73-105 (117)
137 2dc2_A GOPC, golgi associated 23.2 1.1E+02 0.0036 21.0 4.3 35 134-168 53-87 (103)
138 3eul_A Possible nitrate/nitrit 23.1 1.8E+02 0.0062 20.5 5.9 15 136-150 13-27 (152)
139 3hhe_A Ribose-5-phosphate isom 22.9 73 0.0025 26.6 3.8 50 139-196 42-94 (255)
140 3hzh_A Chemotaxis response reg 22.6 1.3E+02 0.0044 21.6 5.0 29 138-169 36-64 (157)
141 3pty_A Arabinosyltransferase C 22.6 19 0.00067 32.2 0.2 11 239-249 271-281 (406)
142 3fpc_A NADP-dependent alcohol 22.4 2.2E+02 0.0074 24.0 7.0 49 135-191 164-213 (352)
143 3i42_A Response regulator rece 22.4 1.9E+02 0.0063 19.6 5.8 12 139-150 4-15 (127)
144 2xdq_B Light-independent proto 22.4 1.9E+02 0.0066 26.3 7.0 70 135-208 300-371 (511)
145 3d4o_A Dipicolinate synthase s 22.3 3E+02 0.01 22.6 7.8 51 135-193 152-202 (293)
146 4b7c_A Probable oxidoreductase 22.3 2.6E+02 0.009 23.2 7.5 51 134-191 146-197 (336)
147 4eyb_A Beta-lactamase NDM-1; m 22.1 1.5E+02 0.0052 24.0 5.7 58 137-195 82-142 (270)
148 3two_A Mannitol dehydrogenase; 22.0 2.6E+02 0.0088 23.5 7.4 49 135-191 174-222 (348)
149 4ej6_A Putative zinc-binding d 21.9 2.2E+02 0.0075 24.3 7.0 66 135-207 180-245 (370)
150 3fet_A Electron transfer flavo 21.7 1.2E+02 0.0042 23.2 4.7 41 51-95 57-98 (166)
151 1v9c_A Precorrin-8X methyl mut 21.7 1.5E+02 0.005 24.2 5.3 35 65-99 150-186 (218)
152 4e34_A Golgi-associated PDZ an 21.5 1.2E+02 0.0042 19.7 4.2 35 134-168 46-80 (87)
153 4dup_A Quinone oxidoreductase; 21.4 2.6E+02 0.0089 23.6 7.3 51 135-192 165-215 (353)
154 2wfb_A Putative uncharacterize 21.3 1E+02 0.0036 21.8 4.0 50 155-207 57-109 (120)
155 3gk5_A Uncharacterized rhodane 21.2 1.1E+02 0.0039 21.0 4.2 28 136-166 53-80 (108)
156 1f8f_A Benzyl alcohol dehydrog 21.1 2.7E+02 0.0092 23.6 7.4 50 135-191 188-237 (371)
157 3l4f_D SH3 and multiple ankyri 21.0 1.6E+02 0.0054 21.3 5.1 35 135-169 83-117 (132)
158 4eye_A Probable oxidoreductase 20.9 3.7E+02 0.013 22.5 8.2 63 135-205 157-219 (342)
159 4gmk_A Ribose-5-phosphate isom 20.9 15 0.00053 30.3 -0.8 48 147-198 26-77 (228)
160 1kyq_A Met8P, siroheme biosynt 20.9 1.3E+02 0.0044 25.2 5.0 33 136-172 11-43 (274)
161 3ip1_A Alcohol dehydrogenase, 20.7 2.9E+02 0.0099 23.8 7.6 49 135-191 211-260 (404)
162 1o97_C Electron transferring f 20.6 1.1E+02 0.0039 25.3 4.6 61 30-95 79-144 (264)
163 2re2_A Uncharacterized protein 20.5 2.4E+02 0.0081 20.6 6.0 47 156-206 70-118 (136)
164 2jvf_A De novo protein M7; tet 20.4 1.1E+02 0.0037 20.4 3.5 45 141-185 18-66 (96)
165 3dfz_A SIRC, precorrin-2 dehyd 20.3 1.1E+02 0.0039 24.7 4.4 30 136-169 29-58 (223)
166 1kwa_A Hcask/LIN-2 protein; PD 20.3 1.5E+02 0.0051 19.6 4.5 32 135-166 44-75 (88)
167 1uhp_A Hypothetical protein KI 20.2 1.4E+02 0.0047 20.4 4.4 34 135-168 60-93 (107)
168 1v6b_A Harmonin isoform A1; st 20.1 1.4E+02 0.0048 21.0 4.6 31 134-164 61-91 (118)
169 5nul_A Flavodoxin; electron tr 20.0 1.5E+02 0.005 21.1 4.7 40 136-175 77-117 (138)
No 1
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=100.00 E-value=6.8e-46 Score=317.06 Aligned_cols=207 Identities=23% Similarity=0.381 Sum_probs=183.2
Q ss_pred ccHH-HHHHHHHHHHHCCceeeC---CccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCC
Q psy1963 3 VSQE-KLNHLCLQLFDIDALKFG---DFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTA 78 (250)
Q Consensus 3 ~~~~-~~~~~~~~l~~~~~~~~g---~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~G 78 (250)
++|+ +++++++.|++.||++|| +|+|+||++||||+|++.++++|+.++.+++.|++.+.+...++|+|+|++++|
T Consensus 20 ~~m~~~~~~~~~~L~~~~av~f~~~g~F~l~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gG 99 (234)
T 3m3h_A 20 FQSNAMKKEIASHLLEIGAVFLQPNDPFTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAG 99 (234)
T ss_dssp -CHHHHHHHHHHHHHHHTSEEECTTSCEECTTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---C
T ss_pred HHHHHHHHHHHHHHHHCCCEEECCCCCEEcCcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccch
Confidence 4565 789999999999999998 799999999999999999999999999999999999988655799999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHH
Q psy1963 79 LPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETI 158 (250)
Q Consensus 79 i~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~ 158 (250)
+++|..+|..+++|++++||+.|.+|.. ..++|.+.+|++||||||++|||+|+.+++
T Consensus 100 i~~a~~lA~~L~~p~~~vrk~~k~~G~~----------------------~~i~g~~~~Gk~VLIVDDvitTG~Tl~~a~ 157 (234)
T 3m3h_A 100 IAHAAWVSDRMDLPMCYVRSKAKGHGKG----------------------NQIEGKAEKGQKVVVVEDLISTGGSAITCV 157 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEC-------------------------------CCEESCCCTTCEEEEEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEeeccCCcc----------------------eEEecccCCCCEEEEEecccchhHHHHHHH
Confidence 9999999999999999999988888765 556777789999999999999999999999
Q ss_pred HHHHhCCCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcC--CCCC
Q psy1963 159 NDLKSVGIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQ--VLPK 231 (250)
Q Consensus 159 ~~L~~~Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~--~~~~ 231 (250)
+.|+++|++++++++++++. +++.+++++.|++++||++++++++++.+.|.|++++.+.+.+|++||. .|..
T Consensus 158 ~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~dl~~~~~~~~~i~~~~~~~~~~~~~~p~~~~w~~ 233 (234)
T 3m3h_A 158 EALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSALTEVAAEKGIIGQAETKKLQEWRKNPADEAWIT 233 (234)
T ss_dssp HHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHHHHHHHHHHTTSSCHHHHHHHHHHHHCTTCGGGGG
T ss_pred HHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHHHHHHHHHHcCCCCHHHHHHHHHHHhCcccccCCC
Confidence 99999999999999999997 6788999999999999999999999999999999999999999999999 8864
No 2
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=100.00 E-value=2.5e-45 Score=315.03 Aligned_cols=204 Identities=25% Similarity=0.385 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHCCceeeC---CccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHH
Q psy1963 5 QEKLNHLCLQLFDIDALKFG---DFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPI 81 (250)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~g---~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~ 81 (250)
++.++++++.|++.+|++|| +|+|+||++||||+|++.++++|+.++.+++.|++.+.+...++|+|+|++++|+++
T Consensus 35 m~~~~~~a~~L~~~gav~~~~~g~F~L~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~ 114 (243)
T 3dez_A 35 MTLAKDIARDLLDIKAVYLKPEEPFTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPH 114 (243)
T ss_dssp HHHHHHHHHHHHHHTSEEECTTSCEEC---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHH
T ss_pred cHHHHHHHHHHHHCCCEEEcCCCcEEeCCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHH
Confidence 67789999999999999998 799999999999999999999999999999999999987655799999999999999
Q ss_pred HHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHH
Q psy1963 82 ATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDL 161 (250)
Q Consensus 82 a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L 161 (250)
|..+|..+++|++++||+.|.+|.. ..++|.+.+|++||||||++|||+|+.++++.|
T Consensus 115 A~~lA~~L~~p~~~vrk~~k~~G~~----------------------~~ieg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L 172 (243)
T 3dez_A 115 GAIIADKMNLPLAYIRSKPKDHGAG----------------------NQIEGRVTKGQKMVIIEDLISTGGSVLDAVAAA 172 (243)
T ss_dssp HHHHHHHTTCCEEEECSSCC---------------------------CCEESCCCTTCEEEEEEEEESSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEeeccCCce----------------------eEEEeccCCCCEEEEEEeeccccHHHHHHHHHH
Confidence 9999999999999999998888765 456777789999999999999999999999999
Q ss_pred HhCCCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCC
Q psy1963 162 KSVGIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQVLP 230 (250)
Q Consensus 162 ~~~Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~~~~ 230 (250)
+++|+++++++++++++ +++.+++++.|++++||+++++|++++.+.|.|++++.+.+++|++||..|+
T Consensus 173 ~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl~~~~~~~~~i~~~~~~~~~~~~~~p~~w~ 242 (243)
T 3dez_A 173 QREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELIKVAKVQGYIDADGLTLLKKFKENQETWQ 242 (243)
T ss_dssp HHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHHHHHHHHTTSSCHHHHHHHHHHHHCTTTTT
T ss_pred HHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHHHHHHHHcCCCCHHHHHHHHHHHhCHHhcC
Confidence 99999999999999997 6789999999999999999999999999999999999999999999999996
No 3
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=293.92 Aligned_cols=198 Identities=49% Similarity=0.850 Sum_probs=183.5
Q ss_pred HHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHH
Q psy1963 8 LNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSV 87 (250)
Q Consensus 8 ~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~ 87 (250)
.+++++.|++.|++++|+|+|+||++||+|+|++.++++|++++.+++.|++.+.+...++|+|+|+|.+|+++|..+|.
T Consensus 3 ~~~~~~~l~~~~a~~~g~f~l~SG~~s~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~ 82 (205)
T 2wns_A 3 LGPLVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICS 82 (205)
T ss_dssp HHHHHHHHHTTTCEEEEEEECTTSCEEEEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEECCeEECCCCcCCEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999987545689999999999999999999
Q ss_pred HcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 88 KYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 88 ~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+++|+++.||..+++|.. ..++|.+.+|++||||||++|||+|+.++++.|+++|++
T Consensus 83 ~l~~p~~~~rk~~k~~g~~----------------------~~~~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~ 140 (205)
T 2wns_A 83 TNQIPMLIRRKETKDYGTK----------------------RLVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLK 140 (205)
T ss_dssp HHTCCEEEECCTTTTSSSC----------------------CSEESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCB
T ss_pred HHCcCEEEEecCcCccCcc----------------------ccccCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCE
Confidence 9999999999887766654 445677779999999999999999999999999999999
Q ss_pred EEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcC
Q psy1963 168 VTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQ 227 (250)
Q Consensus 168 vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~ 227 (250)
++++++++++.+++.+.|++.|++++||+++.++.+++.+++.+++++.+.+.+|+.+|-
T Consensus 141 ~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (205)
T 2wns_A 141 VTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKVDAETVGRVKRFIQEAH 200 (205)
T ss_dssp CCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHHHHHHTTSSCHHHHHHHHHHHHC--
T ss_pred EEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHHHHHHHHHcCCCCHHHHHHHHHHHhChh
Confidence 999999999987889999999999999999999999999999999999999999999884
No 4
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=100.00 E-value=5.6e-43 Score=298.52 Aligned_cols=197 Identities=18% Similarity=0.361 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
.+.+++++.|++.||++||+|+|+||++||||+|++ ++.+|..+..+++.|++.+.+.+.++|+|+|++++|+|+|..+
T Consensus 21 ~~~~~~~~~l~~~~al~~G~F~L~SG~~Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~l 99 (232)
T 3mjd_A 21 QSNAMFIEFALKNQVLKFGEFTLKSGRISPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAI 99 (232)
T ss_dssp CCCCCHHHHHHHTTSEEEEEEECTTSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHCCCeEEeeEEecCCCccceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHH
Confidence 345679999999999999999999999999999997 5689999999999999999987667999999999999999999
Q ss_pred HHHc------CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHH
Q psy1963 86 SVKY------NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETIN 159 (250)
Q Consensus 86 A~~l------~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~ 159 (250)
|..+ ++|++++||+.|.||.. ..++|...+|++|||||||+|||+|+.++++
T Consensus 100 A~~L~~~~g~~~p~~~~RK~~k~~g~~----------------------~~i~g~~~~Gk~VLIVDDVitTG~Tl~~a~~ 157 (232)
T 3mjd_A 100 STVLALKYNIDMPYAFDRKEAKDHGEG----------------------GVFVGADMTNKKVLLIDDVMTAGTAFYESYN 157 (232)
T ss_dssp HHHHHHHHCCCCBEEEECCC-----------------------------CCEEESCCTTCEEEEECSCCSSSHHHHHHHH
T ss_pred HHHHhhhcCCCCcEEEEEeecccCCCC----------------------ceEeccCCCCCEEEEEEeeccccHHHHHHHH
Confidence 9997 89999999998888765 4456656699999999999999999999999
Q ss_pred HHHhCCCeEEEEEEEEeCCccHH--------HHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcC
Q psy1963 160 DLKSVGIVVTDVLTIVDREQGGR--------ANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQ 227 (250)
Q Consensus 160 ~L~~~Ga~vv~~~vlvd~~~~~~--------~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~ 227 (250)
.|+++|++++++++++||+++++ +.+++.|+|++||++++++++++.+. +++++.+.|.+|+..++
T Consensus 158 ~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL~~~~~l~~~~~~~--~~~~~~~~~~~~~~~yg 231 (232)
T 3mjd_A 158 KLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAVTNFESIFEYVKEN--LDETMIDKFKQYRQKYG 231 (232)
T ss_dssp HHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEEEEHHHHHHHHHHH--SCHHHHHHHHHHHHHHB
T ss_pred HHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEEEeHHHHHHHHHhh--CCHHHHHHHHHHHHHhC
Confidence 99999999999999999998766 67778999999999999999999987 89999999999998764
No 5
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=100.00 E-value=1.4e-42 Score=296.62 Aligned_cols=197 Identities=23% Similarity=0.416 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
++++++++.|++.++++||+|+|+||++||||+|++ ++.+|..++.+++.|++.+.+.+.++|+|+|++++|+|+|..+
T Consensus 28 ~~~~~l~~~l~~~~al~~G~F~L~SG~~Sp~y~d~~-ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~l 106 (238)
T 3n2l_A 28 AYQREFIEFALEKQVLKFGEFTLKSGRKSPYFFNAG-LFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTT 106 (238)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECSSSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEecCEEecCCCcccEEEECC-CCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHH
Confidence 568899999999999999999999999999999997 6789999999999999999876667999999999999999999
Q ss_pred HHHc------CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHH
Q psy1963 86 SVKY------NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETIN 159 (250)
Q Consensus 86 A~~l------~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~ 159 (250)
|..+ ++|++++||+.|.||.. ..++|...+| +||||||++|||+|+.++++
T Consensus 107 A~~L~~~~g~~vp~~~~RK~~k~~g~~----------------------~~i~G~~~~G-~VliVDDvitTG~T~~~a~~ 163 (238)
T 3n2l_A 107 AVALADHHDVDTPYCFNRKEAKNHGEG----------------------GNLVGSKLEG-RVMLVDDVITAGTAIRESME 163 (238)
T ss_dssp HHHHHHHSCCCCBEEEECCC------------------------------CEEESCCCS-EEEEECSCCSSSHHHHHHHH
T ss_pred HHHHhHhhCCCccEEEEeeccCCCCCC----------------------ceEeccccCC-cEEEEeeeecccHHHHHHHH
Confidence 9996 89999999998888765 4456756689 99999999999999999999
Q ss_pred HHHhCCCeEEEEEEEEeCCccHH------HHH-HhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcC
Q psy1963 160 DLKSVGIVVTDVLTIVDREQGGR------ANL-KQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQ 227 (250)
Q Consensus 160 ~L~~~Ga~vv~~~vlvd~~~~~~------~~l-~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~ 227 (250)
.|+++|++++++++++||+++|. +.+ ++.|+|++||++++++++++.+.+.++ ++.+.+++|+..++
T Consensus 164 ~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv~v~SL~~~~~l~~~~~~~~~~~-~~~~~~~~~r~~yg 237 (238)
T 3n2l_A 164 LIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLTDLITYLEQQGNNT-EHLEAVKAYRAQYG 237 (238)
T ss_dssp HHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHHSSCCHH-HHHHHHHHHHHHHB
T ss_pred HHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCCCEEEEEEHHHHHHHHHHcCCcH-HHHHHHHHHHHHhC
Confidence 99999999999999999986543 344 678999999999999999999999998 78999999998764
No 6
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=100.00 E-value=3.6e-40 Score=278.72 Aligned_cols=197 Identities=23% Similarity=0.435 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
+.++++++.|++.++++||+|+|+||++||+|+|.+ ++.+|+.+..+++.|++.+.+.+.++|+|+|++.+|+++|..+
T Consensus 3 ~~~~~~~~~l~~~~a~~~g~F~l~SG~~s~~y~d~~-ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~l 81 (213)
T 1lh0_A 3 PYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAG-LFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTT 81 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEECCEEECCCCcccEEEecC-ccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH
Confidence 467789999999999999999999999999999964 7889999999999999999876557899999999999999999
Q ss_pred HHHc------CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHH
Q psy1963 86 SVKY------NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETIN 159 (250)
Q Consensus 86 A~~l------~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~ 159 (250)
|..+ ++|++++||+.+.+|.. ..++|...+| +||||||++|||+|+.++++
T Consensus 82 A~~L~~~~~~~~~~~~~rk~~~~~~~~----------------------~~~~g~~~~g-~VliVDDvitTG~Tl~~a~~ 138 (213)
T 1lh0_A 82 AVALAEHHDKDLPYCFNRKEAKDHGEG----------------------GSLVGSALQG-RVMLVDDVITAGTAIRESME 138 (213)
T ss_dssp HHHHHHHHCCCCBEEEECSSCCSSTTC----------------------SSEEESCCCS-EEEEECSCCSSSCHHHHHHH
T ss_pred HHHHHHhhCCCCCEEEEEeccCccCCC----------------------CceeCCCCCC-CEEEEEecccchHHHHHHHH
Confidence 9999 99999999987777654 3455655689 99999999999999999999
Q ss_pred HHHhCCCeEEEEEEEEeCCccHHHHH-------HhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcC
Q psy1963 160 DLKSVGIVVTDVLTIVDREQGGRANL-------KQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQ 227 (250)
Q Consensus 160 ~L~~~Ga~vv~~~vlvd~~~~~~~~l-------~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~ 227 (250)
.|+++|++++++++++|+.++|++.| ++.|++++||++++++++++.+.|.+ +++.+.+.+|+..++
T Consensus 139 ~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g~~v~sl~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 212 (213)
T 1lh0_A 139 IIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDM-AEHLAAVRAYREEFG 212 (213)
T ss_dssp HHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHHHCGGG-HHHHHHHHHHHHHHB
T ss_pred HHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcCCCeEEEEEHHHHHHHHHHcCCc-HHHHHHHHHHHHHhC
Confidence 99999999999999999987655433 56899999999999999999999988 689999999998764
No 7
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=100.00 E-value=3.6e-39 Score=272.16 Aligned_cols=204 Identities=26% Similarity=0.384 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHCCceeeC---CccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFG---DFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIA 82 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g---~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a 82 (250)
+..+.+++.|.+.|+++++ +|+|+||..||+|+|++.++.+|++++.+++.|++.+.+...++|+|+|++.||+++|
T Consensus 4 ~~~~~~a~~l~~~gai~~~~h~~f~l~sG~~S~~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a 83 (211)
T 2aee_A 4 TLASQIATQLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHG 83 (211)
T ss_dssp CHHHHHHHHHHHTTSEEECTTSCEECGGGCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHH
T ss_pred cHHHHHHHHHHHCCCEEECCCCCeEeCCCCcCCeEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHH
Confidence 5788899999999999997 7999999999999999999999999999999999999765446899999999999999
Q ss_pred HHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHH
Q psy1963 83 TAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLK 162 (250)
Q Consensus 83 ~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~ 162 (250)
..+|..+++|+.++||+.+.+|.. ..++|...+|++||||||++|||+|+.++++.|+
T Consensus 84 ~~la~~l~~p~~~~rk~~~~~g~~----------------------~~i~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~ 141 (211)
T 2aee_A 84 AIIADKMTLPFAYIRSKPKDHGAG----------------------NQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAAS 141 (211)
T ss_dssp HHHHHHHTCCEEEECSSCC----C----------------------CSEESCCCTTCEEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeecCCcCCc----------------------ceecCCCCCcCEEEEEeecccchHHHHHHHHHHH
Confidence 999999999999999876655432 3345656799999999999999999999999999
Q ss_pred hCCCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCC
Q psy1963 163 SVGIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCNNQVLPK 231 (250)
Q Consensus 163 ~~Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~~~~~~~ 231 (250)
++|++++++++++++. +++.+.|++.|++++++++..++.+++.+++.|++++.+.+.+|+++|..|++
T Consensus 142 ~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~w~~ 211 (211)
T 2aee_A 142 REGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKEDQVNWQQ 211 (211)
T ss_dssp HTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTTCC-
T ss_pred HCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHHHHHHHcCCCCHHHHHHHHHHHhChhhcCC
Confidence 9999999999999997 67888998899999999999999999999999999999999999999999973
No 8
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=100.00 E-value=1.5e-39 Score=301.93 Aligned_cols=194 Identities=36% Similarity=0.698 Sum_probs=177.1
Q ss_pred HHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHH
Q psy1963 8 LNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSV 87 (250)
Q Consensus 8 ~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~ 87 (250)
.+++++.|++.|+++||+|+|+||++||||+|++.++.+|+.++.+++.|++.+.+. ++|+|+|++++|+++|..+|.
T Consensus 259 ~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~--~~D~Ivg~~~gGi~~A~~lA~ 336 (453)
T 3qw4_B 259 SVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHY--KFDRIAGLPYAALPIASAISN 336 (453)
T ss_dssp CHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTS--CCSEEEECTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccC--CCCEEEeccCCcHHHHHHHHH
Confidence 467999999999999999999999999999999999999999999999999999754 599999999999999999999
Q ss_pred HcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 88 KYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 88 ~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+|+|++++||+.|+||.. ..++|.+.+|++||||||++|||+|+.++++.|+++|++
T Consensus 337 ~L~~p~~~~rk~~k~~g~~----------------------~~i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~ 394 (453)
T 3qw4_B 337 EMNVPLIYPRREAKIYGTK----------------------AAIEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLE 394 (453)
T ss_dssp HHCCCEEEESSCC-----------------------------CEESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCE
T ss_pred HhCCCEEEEEeeccccCcC----------------------ceEecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCE
Confidence 9999999999998888765 446676779999999999999999999999999999999
Q ss_pred EEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHh
Q psy1963 168 VTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCN 225 (250)
Q Consensus 168 vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~ 225 (250)
++++++++|+.+++++.|++.|++++||++++++++++.+.|.+++++.+.+.+|+.+
T Consensus 395 vv~v~~lvdr~~~g~~~l~~~g~~v~sL~~~~dl~~~~~~~~~i~~~~~~~~~~~~~~ 452 (453)
T 3qw4_B 395 VVSIVVLVDRDMGAKAFLNKLGYDFEAVVGLHQLLPLWRKSNAITSQQEADVRAFLGQ 452 (453)
T ss_dssp EEEEEEEEECSSSHHHHHHHTTCCEEEEEEHHHHHHHTTTTTCSCHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCcchHHHHHhcCCCEEEEeEHHHHHHHHHHcCCCCHHHHHHHHHHHhh
Confidence 9999999999988999999999999999999999999999999999999999999974
No 9
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=100.00 E-value=1.4e-38 Score=271.19 Aligned_cols=198 Identities=23% Similarity=0.368 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
++.+++++.|++.++++||+|+|+||++||+|+|.+ ++.+|+.+..+++.|++.+.+...++|+|+|++.+|+++|..+
T Consensus 7 ~~~~~~~~~l~~~~a~~~g~F~l~SG~~s~~y~d~~-ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~l 85 (226)
T 2ps1_A 7 DYQKNFLELAIECQALRFGSFKLKSGRESPYFFNLG-LFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIV 85 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEECCEEeccCCcCCEEEecC-ccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHH
Confidence 567789999999999999999999999999999965 7889999999999999999876456899999999999999999
Q ss_pred HHHc---------CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHH
Q psy1963 86 SVKY---------NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILE 156 (250)
Q Consensus 86 A~~l---------~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~ 156 (250)
|..+ ++|+++.|++++.+|.. ....+...+|++||||||++|||+|+.+
T Consensus 86 A~~L~~~~~~~~~~~p~~~~rk~~k~~g~~----------------------~~~~~~~i~Gk~VlIVDDvitTG~Tl~~ 143 (226)
T 2ps1_A 86 CVKLAEIGGSKFQNIQYAFNRKEAKDHGEG----------------------GIIVGSALENKRILIIDDVMTAGTAINE 143 (226)
T ss_dssp HHHHHHHSTTTTTTCEEEEEEEEEESSTTC----------------------EEEEESCCTTCEEEEEEEEESSSHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEechhhhcCCC----------------------ceEecCCCCcCEEEEEEecccChHHHHH
Confidence 9998 99999999988877755 3333444589999999999999999999
Q ss_pred HHHHHHhCCCeEEEEEEEEeCCccHH-----------HHHHhcCCcEEEeecHHHHHHHHHHcCCCCHHHHHHHHHHHHh
Q psy1963 157 TINDLKSVGIVVTDVLTIVDREQGGR-----------ANLKQLGYTLHSLFTLSSVMDILYKANKIKVDTVEDVKKYLCN 225 (250)
Q Consensus 157 a~~~L~~~Ga~vv~~~vlvd~~~~~~-----------~~l~~~g~~v~sl~~~~~l~~~~~~~~~i~~~~~~~v~~~l~~ 225 (250)
+++.|+++|++++++++++++.+.+. +.++..|++++||++++++++++.+.+. +++.+.+.+|+.+
T Consensus 144 a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~~~~~~~g~~v~sl~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ 221 (226)
T 2ps1_A 144 AFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQTVSKKYGIPVLSIVSLIHIITYLEGRIT--AEEKSKIEQYLQT 221 (226)
T ss_dssp HHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHHHHHHHHTCCEEEEEEHHHHHHHHGGGCC--SSHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEEEEEEccCcccccccccchHHHHHHHhcCCeEEEEecHHHHHHHHHHcCC--HHHHHHHHHHHHH
Confidence 99999999999999999999986444 2345689999999999999999998877 6889999999998
Q ss_pred cCC
Q psy1963 226 NQV 228 (250)
Q Consensus 226 ~~~ 228 (250)
++.
T Consensus 222 ~~~ 224 (226)
T 2ps1_A 222 YGA 224 (226)
T ss_dssp HBC
T ss_pred hCC
Confidence 854
No 10
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=100.00 E-value=3.9e-37 Score=253.25 Aligned_cols=175 Identities=28% Similarity=0.388 Sum_probs=158.3
Q ss_pred HHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHH-hhcCCCccEEEecCCCCHHHHHHHHHHc
Q psy1963 11 LCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYL-NINKISARTVCGVPYTALPIATAVSVKY 89 (250)
Q Consensus 11 ~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i-~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l 89 (250)
+++.|.+.|++++|+|+|+||++||+|+|++.++.+|++.+.+++.+++.+ ... .++|+|+|++.+|+++|..+|..+
T Consensus 2 ~~~~l~~~ga~~~g~f~L~sG~~s~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~-~~~~~iv~v~~~G~~~a~~la~~l 80 (178)
T 2yzk_A 2 LAKVLKKRGAVLRGDFVLSSGRRSSVYIDMRRLLGDESSYSVALDLLLEVGGQDL-ARSSAVIGVATGGLPWAAMLALRL 80 (178)
T ss_dssp HHHHHHHHTSEEEEEEECTTSCEEEEEECGGGGTTCHHHHHHHHHHHHHHHHHHH-HHCSEEEEETTTTHHHHHHHHHHH
T ss_pred hHHHHHHCCCeEECCeEECCCCCCCeEEEChHhccCHHHHHHHHHHHHHHHhccc-CCCCEEEEecccchHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999988 542 137999999999999999999999
Q ss_pred CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 90 NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 90 ~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
++|+.+.|+..++||.. ..+++.+ +|++||||||++|||+|+.++++.|+++|++++
T Consensus 81 ~~p~~~~r~~~~~~g~~----------------------~~i~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v 137 (178)
T 2yzk_A 81 SKPLGYVRPERKGHGTL----------------------SQVEGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVG 137 (178)
T ss_dssp TCCEEEECCCCTTSCCC----------------------CCCBTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEccccccCcc----------------------ceecccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEE
Confidence 99999999876666654 2234554 899999999999999999999999999999999
Q ss_pred EEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHHcC
Q psy1963 170 DVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYKAN 209 (250)
Q Consensus 170 ~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~~ 209 (250)
.+++++++++++.+.|++.|++++||++++++++++.+.|
T Consensus 138 ~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~~~~~~~~~~ 177 (178)
T 2yzk_A 138 TALVLVDRGEGAGELLARMGVRLVSVATLKTILEKLGWGG 177 (178)
T ss_dssp EEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHHHTTCCC
T ss_pred EEEEEEEcCcCHHHHHHHcCCcEEEEeeHHHHHHHHHHcC
Confidence 9999999988889999889999999999999999987654
No 11
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.9e-35 Score=243.63 Aligned_cols=170 Identities=24% Similarity=0.316 Sum_probs=134.3
Q ss_pred HHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHH
Q psy1963 8 LNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSV 87 (250)
Q Consensus 8 ~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~ 87 (250)
.+++.+.|. .+++++|+|+|+||++||+|+|++.++.+|+.++.+++.|++.+.+. ++|+|+|+|.+|+++|..+|.
T Consensus 7 ~~~l~~ll~-~~a~~~g~f~l~SG~~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~--~~d~vv~v~~gG~~~a~~la~ 83 (180)
T 2p1z_A 7 KAELAELVK-ELAVVHGKVTLSSGKEADYYVDLRRATLHARASRLIGELLRELTADW--DYVAVGGLTLGADPVATSVMH 83 (180)
T ss_dssp HHHHHHHHH-HHTC---------------CCCTHHHHTSHHHHHHHHHHHHHTTTTS--CCSEEEEETTTHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCeEeCcEEECCCCcCCEEEEChhhcCCHHHHHHHHHHHHHHHhhc--CCCEEEEecCCCHHHHHHHHH
Confidence 466777555 59999999999999999999999999999999999999999998764 589999999999999999999
Q ss_pred HcCCC--EEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCC
Q psy1963 88 KYNIP--MLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVG 165 (250)
Q Consensus 88 ~l~ip--~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G 165 (250)
.+++| +.++|+..+++|.. ..++|.+.+|++||||||++|||+|+.++++.|+++|
T Consensus 84 ~l~~~~~~~~~rk~~~~~g~~----------------------~~~~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~G 141 (180)
T 2p1z_A 84 ADGREIHAFVVRKEAKKHGMQ----------------------RRIEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAG 141 (180)
T ss_dssp SSSSCCEEEEECSCCC-CC-C----------------------CSEESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHT
T ss_pred HHCCCCCeEEEEeccccccch----------------------hhccCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcC
Confidence 99866 57788765555543 3455666799999999999999999999999999999
Q ss_pred CeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHH
Q psy1963 166 IVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVM 202 (250)
Q Consensus 166 a~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~ 202 (250)
++++++++++++++++++.+++.|++++||+++++++
T Consensus 142 a~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~l~ 178 (180)
T 2p1z_A 142 AEVVGVATVVDRATGAADVIAAEGLEYRYILGLEDLG 178 (180)
T ss_dssp CEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTTTT
T ss_pred CeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHHhh
Confidence 9999999999999889999988999999999998863
No 12
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.94 E-value=2e-26 Score=191.86 Aligned_cols=182 Identities=19% Similarity=0.295 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 6 EKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 6 ~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
|.+++|++.|.+.+++++|+|. +| ++|+| +.++|.+++.+++.|++.+... ++|+|+|+|.+|+++|..+
T Consensus 2 ~~~~~l~~~l~~~~~~~~g~~l-~~----~~~~~---~~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~rG~~~a~~l 71 (197)
T 1y0b_A 2 NAMEALKRKIEEEGVVLSDQVL-KV----DSFLN---HQIDPLLMQRIGDEFASRFAKD--GITKIVTIESSGIAPAVMT 71 (197)
T ss_dssp CHHHHHHHHHHHHCEEETTTEE-EC----TTTTS---SEECHHHHHHHHHHHHHHTTTT--TCCEEEEETTTTHHHHHHH
T ss_pred CHHHHHHHHHhhCCEecCCCEE-Ee----hhhhc---ccCCHHHHHHHHHHHHHHhhcC--CCCEEEEEcccCHHHHHHH
Confidence 4578899999999999999995 33 35555 4579999999999999998754 5799999999999999999
Q ss_pred HHHcCCCEEEEeeccCCcCccccccc-eeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 86 SVKYNIPMLIRRKDVKTYGTKKLIEG-VYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 86 A~~l~ip~~~~rk~~k~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
|..+++|+++.|+..+.+..+..... .+... .. ....+....+...+|++||||||++|||+|+.+|++.|+++
T Consensus 72 a~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~----~~-~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ 146 (197)
T 1y0b_A 72 GLKLGVPVVFARKHKSLTLTDNLLTASVYSFT----KQ-TESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQA 146 (197)
T ss_dssp HHHHTCCEEEEBSSCCSSCCSSEEEEEEEETT----TT-EEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred HHHhCCCEEEEEecCCCCCCCceEEEeeeccc----cC-ceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHC
Confidence 99999999888886543321110100 01000 00 00001112234468999999999999999999999999999
Q ss_pred CCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEeecHHHHH
Q psy1963 165 GIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLFTLSSVM 202 (250)
Q Consensus 165 Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~~~~~l~ 202 (250)
|++.+.+++++++. .++.+.|++.|+++++|++++++.
T Consensus 147 Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~~sl~~~~~i~ 185 (197)
T 1y0b_A 147 GASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLE 185 (197)
T ss_dssp TCEEEEEEEEEEETTSTHHHHHHHTTCCEEEEEEEEECT
T ss_pred CCEEEEEEEEEEecccchhhhHHhcCCcEEEEEEEEEec
Confidence 99999999999996 578899988999999999988874
No 13
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.94 E-value=1.8e-26 Score=197.63 Aligned_cols=165 Identities=19% Similarity=0.335 Sum_probs=135.8
Q ss_pred CCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEEEEeeccCCc
Q psy1963 24 GDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPMLIRRKDVKTY 103 (250)
Q Consensus 24 g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~~rk~~k~~ 103 (250)
++|+ +.|. |+|+|++.++.+|+.++.+++.|++.+.+...++|+|+|++.+|+++|..+|..+|+|++++||..+.+
T Consensus 31 ~dfp-~~gi--p~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~~p~~~~rk~~k~~ 107 (236)
T 1qb7_A 31 PVFS-PRNV--PRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLMRKADKNA 107 (236)
T ss_dssp GGGS-SSCS--SSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTCCEEEEBCGGGCC
T ss_pred CCCC-CCCC--EeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhCCCEEEEEEecCCC
Confidence 7888 6776 799999999999999999999999999876446899999999999999999999999999999876654
Q ss_pred Cccccc-cceeecCCcccccccc---c--ccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeC
Q psy1963 104 GTKKLI-EGVYEKGDKRKDVKTY---G--TKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDR 177 (250)
Q Consensus 104 g~~~~~-~~~~~~~~~~~~~~~~---~--~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~ 177 (250)
+.. . +..| ..+| + .+....+...+|++||||||++|||+|+.++++.|+++|++++++++++++
T Consensus 108 ~~~--~~s~~~--------~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~ 177 (236)
T 1qb7_A 108 GLL--IRSEPY--------EKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSI 177 (236)
T ss_dssp SSE--EECCCC--------CCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred Ccc--eeceec--------cchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEEEc
Confidence 432 1 1111 1111 1 112222555689999999999999999999999999999999999999999
Q ss_pred Cc-cHHHHHHhc------CCcEEEeecHHHH
Q psy1963 178 EQ-GGRANLKQL------GYTLHSLFTLSSV 201 (250)
Q Consensus 178 ~~-~~~~~l~~~------g~~v~sl~~~~~l 201 (250)
.. ++.+.|.+. |++++||++++++
T Consensus 178 ~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~ 208 (236)
T 1qb7_A 178 PFLKAAEKIHSTANSRYKDIKFISLLSDDAL 208 (236)
T ss_dssp GGGCHHHHHHHHHHHTTTTCCEEEEEEGGGC
T ss_pred ccccHHHHHhhhcccccCCCcEEEEEEcccc
Confidence 84 788888764 9999999999884
No 14
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.94 E-value=3.1e-26 Score=189.88 Aligned_cols=169 Identities=21% Similarity=0.336 Sum_probs=135.7
Q ss_pred HHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEE
Q psy1963 15 LFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPML 94 (250)
Q Consensus 15 l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~ 94 (250)
+++..+..+++|+. .|. .|+|+..++.+|++++.+++.|++.+.+. ++|+|+|+|.+|+++|..+|..+++|++
T Consensus 17 ~l~~~i~~~p~~~~-~g~---~~~d~~~~~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~rG~~~a~~la~~l~~p~~ 90 (190)
T 2dy0_A 17 YLKNSIKSIQDYPK-PGI---LFRDVTSLLEDPKAYALSIDLLVERYKNA--GITKVVGTEARGFLFGAPVALGLGVGFV 90 (190)
T ss_dssp HHHHHSEEETTCSS-TTC---CEEETHHHHHCHHHHHHHHHHHHHHHTTT--TCCEEEEETTHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHhhCCCCCC-CCe---EEEeChhhhcCHHHHHHHHHHHHHHhccC--CCCEEEEECcccHHHHHHHHHHHCCCEE
Confidence 45667778899994 466 69999999999999999999999998754 5899999999999999999999999998
Q ss_pred EEeeccCCcCccccccceeecCCcccccccccc--cceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEE
Q psy1963 95 IRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGT--KKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVL 172 (250)
Q Consensus 95 ~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~ 172 (250)
+.||..+..+.. ....+ ..+|++ +....+...+|++||||||++|||+|+.++++.|+++|++++.++
T Consensus 91 ~~rk~~~~~~~~--~~~~~--------~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~ 160 (190)
T 2dy0_A 91 PVRKPGKLPRET--ISETY--------DLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAA 160 (190)
T ss_dssp EEBSTTCCCSCE--EEEEE--------EETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCCCCccc--cccee--------hhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEE
Confidence 888865422211 11111 111111 111123446899999999999999999999999999999999999
Q ss_pred EEEeCCc-cHHHHHHhcCCcEEEeecHH
Q psy1963 173 TIVDREQ-GGRANLKQLGYTLHSLFTLS 199 (250)
Q Consensus 173 vlvd~~~-~~~~~l~~~g~~v~sl~~~~ 199 (250)
+++++.+ ++.+.|++.|++++||++++
T Consensus 161 ~l~~~~~~~~~~~l~~~g~~v~sl~~~~ 188 (190)
T 2dy0_A 161 FIINLFDLGGEQRLEKQGITSYSLVPFP 188 (190)
T ss_dssp EEEEEGGGCHHHHHHTTTCEEEEEEEEC
T ss_pred EEEEccCcchHHHHhhCCCcEEEEEEec
Confidence 9999974 78899988999999999874
No 15
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=1.6e-24 Score=190.66 Aligned_cols=175 Identities=24% Similarity=0.333 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHH
Q psy1963 5 QEKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATA 84 (250)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~ 84 (250)
.+++++|.+.|.+.+++++|+|.+ ...++.+|++++.+++.+++.+.+. .+|+|+|+|.+|+++|..
T Consensus 81 ~~~~~~l~~~l~~~~~v~~G~f~~-----------~~~ll~~p~l~~~la~~la~~~~~~--~~d~Iv~V~~rG~~~A~~ 147 (291)
T 1o57_A 81 EEFVQTLGQSLANPERILPGGYVY-----------LTDILGKPSVLSKVGKLFASVFAER--EIDVVMTVATKGIPLAYA 147 (291)
T ss_dssp HHHHHHHHHHHTCGGGEETTTEEC-----------CTTTTTCHHHHHHHHHHHHHHTTTS--CCSEEEEETTTTHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcccCCeEE-----------ehhhhCCHHHHHHHHHHHHHHhhcc--CCCEEEEECCCCHHHHHH
Confidence 457788999999999999999884 3457889999999999999998754 589999999999999999
Q ss_pred HHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 85 VSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 85 lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
+|..+|+|++++||..+.. .+......+..+ +... ...+...+..+.+|++||||||++|||+|+.++++.|+++
T Consensus 148 lA~~L~vp~v~~rk~~~~t-~~~~~~~~~~~g---~~~~-~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~a 222 (291)
T 1o57_A 148 AASYLNVPVVIVRKDNKVT-EGSTVSINYVSG---SSNR-IQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEF 222 (291)
T ss_dssp HHHHHTCCEEEEBCC------CCEEEEEEECS---SCCS-EEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGG
T ss_pred HHHHhCCCEEEEEEeccCC-CCceeeeeeecc---cccc-eeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHC
Confidence 9999999999988865431 111111111110 0000 0001122223468999999999999999999999999999
Q ss_pred CCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHH
Q psy1963 165 GIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSV 201 (250)
Q Consensus 165 Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l 201 (250)
||+++++++++++.++ .+ ..+++++||++++++
T Consensus 223 GA~vV~v~vlvdr~~~-~~---~l~~~~~SL~~~~~~ 255 (291)
T 1o57_A 223 NANVAGIGVLVEAEGV-DE---RLVDEYMSLLTLSTI 255 (291)
T ss_dssp TCEEEEEEEEEEESSC-TT---SCCSCCEEEEEEECC
T ss_pred CCEEEEEEEEEEcCcc-cc---ccCCceEEEEEEccc
Confidence 9999999999999865 22 357899999999887
No 16
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.92 E-value=3.2e-24 Score=176.15 Aligned_cols=167 Identities=17% Similarity=0.324 Sum_probs=130.3
Q ss_pred HHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcC-CCccEEEecCCCCHHHHHHHHHHcCCCEE
Q psy1963 16 FDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINK-ISARTVCGVPYTALPIATAVSVKYNIPML 94 (250)
Q Consensus 16 ~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~-~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~ 94 (250)
++.-.-.+.+|. ++|. +|.|.+.++.+|+..+.+++.|++.+.... .++|+|+|++.+|+++|..+|..+++|++
T Consensus 9 l~~~i~~~~~~p-~~g~---~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~~ 84 (180)
T 1zn8_A 9 VEQRIRSFPDFP-TPGV---VFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCV 84 (180)
T ss_dssp HHTTCEEEETCS-STTC---EEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHhcCCCCC-cCCe---EEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCEE
Confidence 444456678898 7777 799999999999999999999999887542 24799999999999999999999999998
Q ss_pred EEeeccCCcCccccccceeecCCccccccccc--ccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEE
Q psy1963 95 IRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYG--TKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVL 172 (250)
Q Consensus 95 ~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~ 172 (250)
+.|+..+..+.. ....+. ..+. .+....+...+|++||||||++|||+|+.++++.|+++|++.+.++
T Consensus 85 ~~r~~~~~~~~~--~~~~~r--------~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~ 154 (180)
T 1zn8_A 85 LIRKRGKLPGPT--LWASYS--------LEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV 154 (180)
T ss_dssp EEEETTCCCSSE--EEEEEE--------ETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCCCCccc--ccHHHH--------HhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEE
Confidence 888764322211 111110 0010 1122223346899999999999999999999999999999999999
Q ss_pred EEEeCCc-cHHHHHHhcCCcEEEeecH
Q psy1963 173 TIVDREQ-GGRANLKQLGYTLHSLFTL 198 (250)
Q Consensus 173 vlvd~~~-~~~~~l~~~g~~v~sl~~~ 198 (250)
+++++.. ++.+.++ |++++||+++
T Consensus 155 ~l~~~~~~~~~~~l~--~~~~~sl~~~ 179 (180)
T 1zn8_A 155 SLVELTSLKGREKLA--PVPFFSLLQY 179 (180)
T ss_dssp EEEEEGGGCHHHHHT--TSCEEEEEEE
T ss_pred EEEEccCcchhhhhc--CCceEEEEec
Confidence 9999974 7788876 8999999875
No 17
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.91 E-value=2.9e-24 Score=177.56 Aligned_cols=173 Identities=16% Similarity=0.276 Sum_probs=129.7
Q ss_pred HHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcC--CCccEEEecCCCCHHHHHHHHH
Q psy1963 10 HLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINK--ISARTVCGVPYTALPIATAVSV 87 (250)
Q Consensus 10 ~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~--~~~d~Ivgv~~~Gi~~a~~lA~ 87 (250)
++.+.|.+ ..-...+|. +.|. +|+|+..++.+|+.++.+++.|++.+.+.. .++|+|+|++.+|+++|..+|.
T Consensus 5 ~~~~~l~~-~~~~~~~~p-~~g~---~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~ 79 (187)
T 1g2q_A 5 SYAQELKL-ALHQYPNFP-SEGI---LFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLAL 79 (187)
T ss_dssp HHHHHHHH-HCEEETTCS-STTC---CEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHH
T ss_pred HHHHHHHH-hcccCCCCC-CCCE---EEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHH
Confidence 34444433 333457788 6776 799999999999999999999999998642 3689999999999999999999
Q ss_pred HcCCCEEEEeeccCCcCccccccceeecCCcccccccccc--cceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCC
Q psy1963 88 KYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGT--KKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVG 165 (250)
Q Consensus 88 ~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G 165 (250)
.+|+|+.++|+..+..+.. ....+ ..++.+ +....+...+|++||||||++|||+|+.++++.|+++|
T Consensus 80 ~l~~p~~~~rk~~~~~~~~--~~~~~--------r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G 149 (187)
T 1g2q_A 80 ALGVGFVPVRKAGKLPGEC--FKATY--------EKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLE 149 (187)
T ss_dssp HHTCEEEEEEETTCSCSSE--EEEEE--------ECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTT
T ss_pred HHCCCEEEEEEeCCCCcce--ecHHH--------HHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcC
Confidence 9999998888864432211 11111 011111 12222344689999999999999999999999999999
Q ss_pred CeEEEEEEEEeCCc-cHHHHHHhcCCcEEEeecHHH
Q psy1963 166 IVVTDVLTIVDREQ-GGRANLKQLGYTLHSLFTLSS 200 (250)
Q Consensus 166 a~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~~~~~ 200 (250)
++++.+++++++.+ ++++.+ |++++||+++++
T Consensus 150 a~~v~~~~l~~~~~~~g~~~l---~~~~~sl~~~~~ 182 (187)
T 1g2q_A 150 ANLLEYNFVMELDFLKGRSKL---NAPVFTLLNAQK 182 (187)
T ss_dssp CEEEEEEEEEECCCSSCCCCC---SSCEEECC----
T ss_pred CeEEEEEEEEEccCcCchhhc---CccEEEEEEech
Confidence 99999999999984 667655 999999999876
No 18
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.90 E-value=8.5e-23 Score=168.65 Aligned_cols=162 Identities=20% Similarity=0.274 Sum_probs=125.6
Q ss_pred CceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEEEEee
Q psy1963 19 DALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPMLIRRK 98 (250)
Q Consensus 19 ~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~~rk 98 (250)
-.-.+.+|. ++|. +|.|...++.+|++.+.+++.|++.+... ++|+|+|+|.+|+++|..+|..+|+|+++.|+
T Consensus 11 ~~~~~p~~p-~~g~---~~~d~~~~l~~~~~~~~l~~~la~~~~~~--~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~rk 84 (186)
T 1l1q_A 11 LIKTIPDFP-TKGI---AFKDLSDILSTPAALDAVRKEVTAHYKDV--PITKVVGIESRGFILGGIVANSLGVGFVALRK 84 (186)
T ss_dssp TCEEETTCS-STTC---CEEECHHHHTCHHHHHHHHHHHHHHTTTS--CCCEEEEESGGGHHHHHHHHHHHTCEEEEEEE
T ss_pred hhccCCCCC-CCCe---EEEEhHHHhCCHHHHHHHHHHHHHHhhcc--CCCEEEEcCcccHHHHHHHHHHhCCCEEEEEe
Confidence 344456788 5666 79999999999999999999999888643 58999999999999999999999999998888
Q ss_pred ccCCcCccccccceeecCCccccccccc---ccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCe--EEEEEE
Q psy1963 99 DVKTYGTKKLIEGVYEKGDKRKDVKTYG---TKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIV--VTDVLT 173 (250)
Q Consensus 99 ~~k~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~--vv~~~v 173 (250)
..+..+.. ....+. ..++ .+....+...+|++||||||++|||+|+.+|++.|+++|++ ++.+++
T Consensus 85 ~~~~~~~~--~~~~~~--------~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~ 154 (186)
T 1l1q_A 85 AGKLPGDV--CKCTFD--------MEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINV 154 (186)
T ss_dssp TTSSCSSE--EEEEEE--------ETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCCCCce--echhhh--------hhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEE
Confidence 75432211 111111 0111 01222244458999999999999999999999999999999 999999
Q ss_pred EEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 174 IVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 174 lvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
++++++ +|++.|.+.+++....+
T Consensus 155 l~~k~~~~g~~~l~~~~~~~~~~~ 178 (186)
T 1l1q_A 155 LYEIEALKGREKVGQKCTRLFSVI 178 (186)
T ss_dssp EEECGGGCHHHHHTTTCCCEEEEE
T ss_pred EEEccCccHHHHHhhcCcceehhh
Confidence 999985 78999987776654443
No 19
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.89 E-value=1.5e-22 Score=165.33 Aligned_cols=156 Identities=13% Similarity=0.192 Sum_probs=119.8
Q ss_pred eeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEEEEeeccC
Q psy1963 22 KFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPMLIRRKDVK 101 (250)
Q Consensus 22 ~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~~rk~~k 101 (250)
.+.+|.+++|. |++..++..++++.+.+++.|++.+.. ++|+|+|++.+|+++|..+|..+++|+++.|+..+
T Consensus 14 ~~~~~~~~~g~----~i~~~k~~~~~~~~~~~~~~la~~~~~---~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~~ 86 (175)
T 1vch_A 14 HVPLIEPLPGR----RIPLVEFLGDPEFTRAAAEALRPLVPK---EAEILFTTETSPIPLTHVLAEALGLPYVVARRRRR 86 (175)
T ss_dssp EECEEEEETTE----EEECCCCTTCHHHHHHHHHHHGGGSCT---TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCC
T ss_pred EcCceEcCCCc----EEEeeeccCCHHHHHHHHHHHHHHhcc---CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecCC
Confidence 34678987766 689999999999999999999888764 47999999999999999999999999998888766
Q ss_pred CcCccccccceeecCCcccccccccccceEecc-c--cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCC
Q psy1963 102 TYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGV-Y--EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDRE 178 (250)
Q Consensus 102 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~-~--~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~ 178 (250)
.++........+.. .. .... ...+.+. . .+|++||||||++|||+|+.++++.|+++|++.+.++++++++
T Consensus 87 ~~~~~~~~~~~~~~----r~-~~~~-~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~ 160 (175)
T 1vch_A 87 PYMEDPIIQEVQTL----TL-GVGE-VLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQG 160 (175)
T ss_dssp TTCCSCEEEECCC-----------C-EEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred CCCCcceeeeeecc----cc-CCce-EEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecC
Confidence 55433111111000 00 0000 0112222 1 3899999999999999999999999999999999999999998
Q ss_pred ccHHHHHHhcCCcEEEeecH
Q psy1963 179 QGGRANLKQLGYTLHSLFTL 198 (250)
Q Consensus 179 ~~~~~~l~~~g~~v~sl~~~ 198 (250)
.+ +.+++||..+
T Consensus 161 ~~--------~~~~~sl~~~ 172 (175)
T 1vch_A 161 TP--------GLAVDTVAEL 172 (175)
T ss_dssp CC--------SSCCEEEEEC
T ss_pred CC--------CcceEEEEee
Confidence 44 7899999865
No 20
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.81 E-value=1.3e-19 Score=151.91 Aligned_cols=168 Identities=17% Similarity=0.143 Sum_probs=112.6
Q ss_pred HHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEEE--EeeccCCc----Cccccc-cce-eecCCc-c--c
Q psy1963 52 YLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPMLI--RRKDVKTY----GTKKLI-EGV-YEKGDK-R--K 120 (250)
Q Consensus 52 ~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~--~rk~~k~~----g~~~~~-~~~-~~~~~~-~--~ 120 (250)
.+++.|++.+.+...+.++|+|+|+||+++|..+|+.+++|+.+ +|+..... +.+++. .+. ...... . +
T Consensus 8 ~a~~~La~~i~~~~~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~ 87 (208)
T 1wd5_A 8 HAGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYAD 87 (208)
T ss_dssp HHHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccC
Confidence 34556666665444467999999999999999999999999876 55542210 000000 000 000000 0 0
Q ss_pred cc----------ccc-cccceEe----ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHH
Q psy1963 121 DV----------KTY-GTKKLIE----GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANL 185 (250)
Q Consensus 121 ~~----------~~~-~~~~~i~----g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l 185 (250)
+. .+. .+...++ ....+|++||||||++|||+|+.++++.|+++|++.+.+++++++. .+.+.|
T Consensus 88 ~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~-~~~~~l 166 (208)
T 1wd5_A 88 QSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP-EAVERL 166 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH-HHHHHh
Confidence 00 000 0000111 1125899999999999999999999999999999999999998886 567778
Q ss_pred HhcCCcEEEeec---HHHHHHHHHHcCCCCHHHHHHHHHHHH
Q psy1963 186 KQLGYTLHSLFT---LSSVMDILYKANKIKVDTVEDVKKYLC 224 (250)
Q Consensus 186 ~~~g~~v~sl~~---~~~l~~~~~~~~~i~~~~~~~v~~~l~ 224 (250)
.+.+ +++++.+ +.++.+++.+++.++ .+++..+|.
T Consensus 167 ~~~~-~~v~~~~~~~f~~v~~~y~~~~~~~---~~ev~~~l~ 204 (208)
T 1wd5_A 167 KARA-EVVALSVPQDFAAVGAYYLDFGEVT---DEDVEAILL 204 (208)
T ss_dssp HTTS-EEEEEECCTTCCCGGGGBSCCCCCC---HHHHHHHHH
T ss_pred cccC-cEEEEecCcchhhHHHHhcCCCCCC---HHHHHHHHH
Confidence 7777 9999998 445678899999999 555566555
No 21
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.74 E-value=1e-17 Score=137.64 Aligned_cols=131 Identities=16% Similarity=0.175 Sum_probs=95.9
Q ss_pred ccCeEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCEEE--EeeccCCcCccccc
Q psy1963 33 KTPVYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPMLI--RRKDVKTYGTKKLI 109 (250)
Q Consensus 33 ~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~--~rk~~k~~g~~~~~ 109 (250)
.||++-|++.++.+++.+..++..|++.+.+. ..++++|+|++.||+++|..+|..+++|+.+ ++.. .|... ..
T Consensus 3 ~~~~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~--~y~~~-~~ 79 (183)
T 1hgx_A 3 ETPMMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICS--SYSGT-KS 79 (183)
T ss_dssp ----CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEE--C-------
T ss_pred CCCcCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEE--ecCCc-cc
Confidence 46788888888899999999999999998753 3368999999999999999999999999643 2221 12100 00
Q ss_pred cceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 110 EGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.+.. .+ . .... ...+|++||||||++|||+|+.++++.|+++|++.+.+++++++..
T Consensus 80 ~~~~----------~~-~-~~~~-~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 80 TGNL----------TI-S-KDLK-TNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp ---C----------EE-E-ECCS-SCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred ccce----------EE-e-ecCC-CCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0000 00 0 0011 2358999999999999999999999999999999999999998864
No 22
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.72 E-value=5.7e-17 Score=143.80 Aligned_cols=158 Identities=15% Similarity=0.096 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHCCceeeCCccccCccccCeEeecc--cccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHH
Q psy1963 7 KLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLR--GIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATA 84 (250)
Q Consensus 7 ~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~--~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~ 84 (250)
..+-+++.|...|+-+.-.+.+++++...|| |.. .+...|. +++.+.+...+..+|+|++.||+++|..
T Consensus 113 sak~vA~ll~~~G~d~vit~DlH~~qiqgfF-~ipvd~l~a~p~--------l~~~i~~~~~~~~vVVspd~Ggv~~A~~ 183 (319)
T 3dah_A 113 SAKVVANMLEIAGVERIITMDLHADQIQGFF-DIPVDNIYATPI--------LLGDLRKQNYPDLLVVSPDVGGVVRARA 183 (319)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCSCGGGGGGC-SSCEEEECCHHH--------HHHHHHTTCCTTEEEECCSSTTHHHHHH
T ss_pred cHHHHHHHHHhcCCCEEEEEECCChHHhhhc-CCceEecccHHH--------HHHHHHHhCCCCcEEEEeCCCccHHHHH
Confidence 5677888888899999999999999988776 432 2333333 3444444333568999999999999999
Q ss_pred HHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 85 VSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 85 lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
+|..+|+|+.+.+|.++..+.. + ...+.|. .+|++|+||||+++||+|+.++++.|+++
T Consensus 184 lA~~L~~p~~~i~K~r~~~~~v----~----------------~~~i~g~-v~gk~viiVDDii~TG~Tl~~a~~~L~~~ 242 (319)
T 3dah_A 184 LAKQLNCDLAIIDKRRPKANVA----E----------------VMNIIGE-VEGRTCVIMDDMVDTAGTLCKAAQVLKER 242 (319)
T ss_dssp HHHHTTCEEEC-----------------------------------------CCSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEEEEeccCCce----E----------------EEEcccc-CCCCEEEEEecccCchHHHHHHHHHHHHc
Confidence 9999999999998875443321 0 0223344 58999999999999999999999999999
Q ss_pred CCeEEEEEEEEeCC-ccHHHHHHhcCCcEEE
Q psy1963 165 GIVVTDVLTIVDRE-QGGRANLKQLGYTLHS 194 (250)
Q Consensus 165 Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~s 194 (250)
|++.+.+++.+... .++.++|++.+++-..
T Consensus 243 Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~vv 273 (319)
T 3dah_A 243 GAKQVFAYATHPVLSGGAADRIAASALDELV 273 (319)
T ss_dssp TCSCEEEEEEEECCCTTHHHHHHTSSCSEEE
T ss_pred CCCEEEEEEEeecCChHHHHHHHhCCCCEEE
Confidence 99999999988875 5788889876665433
No 23
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.72 E-value=2e-17 Score=144.91 Aligned_cols=155 Identities=14% Similarity=0.117 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHH
Q psy1963 7 KLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVS 86 (250)
Q Consensus 7 ~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA 86 (250)
..+-+++.|... .++.++++.+++.+ +.++..|......+..|++.+.+ ..+.++|++++.||+++|..+|
T Consensus 104 ~ak~vA~ll~~~-----~d~vit~dlH~~~~---~~~f~~p~d~l~a~~~La~~i~~-~~~~~vVv~pd~Gg~~~a~~la 174 (284)
T 1u9y_A 104 SIRALAKIYSNI-----VDKLITINPHETHI---KDFFTIPFIYGDAVPKLAEYVKD-KLNDPIVLAPDKGALEFAKTAS 174 (284)
T ss_dssp HHHHHHHHHHHH-----CSEEEEESCSCGGG---GGGCSSCEEEECCHHHHHHHHTT-TCSSCEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHhhc-----cCEEEEecCCChHH---HHHhCCchhHhhHHHHHHHHHHh-cCCCcEEEEEcCChHHHHHHHH
Confidence 456677776664 57777778877753 22333332222345566666665 3357899999999999999999
Q ss_pred HHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 87 VKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 87 ~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
..+|+|+.+.+|+++..+.. . ..+.|...+|++|+||||++|||+|+.++++.|+++|+
T Consensus 175 ~~l~~p~~~i~k~r~~~~~~-----~----------------~~l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga 233 (284)
T 1u9y_A 175 KILNAEYDYLEKTRLSPTEI-----Q----------------IAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGA 233 (284)
T ss_dssp HHHTCCEEEBC-------------------------------CCBSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTC
T ss_pred HHhCCCEEEEEEEEcCCCeE-----E----------------EEecCccCCCCEEEEEecccCchHHHHHHHHHHHHCCC
Confidence 99999999888765432200 0 12234236899999999999999999999999999999
Q ss_pred eEEEEEEEEeCC-ccHHHHHHhcCCc
Q psy1963 167 VVTDVLTIVDRE-QGGRANLKQLGYT 191 (250)
Q Consensus 167 ~vv~~~vlvd~~-~~~~~~l~~~g~~ 191 (250)
+.+.+++++... .++.++|++.|+.
T Consensus 234 ~~V~~~~~h~v~s~~a~~~l~~~~i~ 259 (284)
T 1u9y_A 234 KKIIAACVHPVLIGDALNKLYSAGVE 259 (284)
T ss_dssp CSEEEEEEECCCCTTHHHHHHHHTCS
T ss_pred cEEEEEEEeEecCcHHHHHHHhCCCC
Confidence 999999987775 5678888877654
No 24
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.71 E-value=8.7e-17 Score=132.07 Aligned_cols=130 Identities=13% Similarity=0.173 Sum_probs=92.6
Q ss_pred CccccCeEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCEE--EEeeccCCcCcc
Q psy1963 30 VGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPML--IRRKDVKTYGTK 106 (250)
Q Consensus 30 sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~--~~rk~~k~~g~~ 106 (250)
||..+|.|.+ ++-+++..+...+.|++.+.+. ..+.++|+|+..||+++|..+|..+++|+. +++.. .|+..
T Consensus 2 ~gm~~~~~~~---~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~--~y~~~ 76 (181)
T 2ywu_A 2 KGMFTPGNGP---VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS--SYGNA 76 (181)
T ss_dssp --CCCCCSSS---CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------
T ss_pred CCCCCCCccc---EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEE--EecCC
Confidence 7888888765 3445555666777888888764 236799999999999999999999999953 44432 23221
Q ss_pred ccccceeecCCcccccccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 107 KLIEGVYEKGDKRKDVKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
....+.. ..... ...+|++||||||+++||+|+.++++.|+++|++.+.+++++++.+
T Consensus 77 ~~~~~~v---------------~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 77 FKSSGEV---------------ELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp ----------------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccccCcE---------------EEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 0000000 11111 2258999999999999999999999999999999999999999874
No 25
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.71 E-value=1e-16 Score=145.54 Aligned_cols=180 Identities=9% Similarity=0.075 Sum_probs=116.5
Q ss_pred HHHHHHHHHHCCceeeCCccccCccccCeEeec--ccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHH
Q psy1963 8 LNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDL--RGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAV 85 (250)
Q Consensus 8 ~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~--~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~l 85 (250)
.+.+++.|...|+-++..+.++|++.+.|| |. ..+...|.+ ++.+.+.+.+ .+.++|+|++.||+++|..+
T Consensus 137 ak~vA~lL~~aGad~vit~DlHs~q~qgfF-~ipvD~l~A~p~L----a~~I~~~~~~--~~~~vVV~pd~GGv~~A~~l 209 (379)
T 2ji4_A 137 SKLLASMMCKAGLTHLITMDLHQKEIQGFF-NIPVDNLRASPFL----LQYIQEEIPD--YRNAVIVAKSPASAKRAQSF 209 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEESCSSGGGGGGS-SSCEEEECCHHHH----HHHHHHHSTT--GGGEEEEESSGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCChhhcccc-CCceeeeccHHHH----HHHHHHhccc--CCCcEEEEEccchHHHHHHH
Confidence 467899999999999999999999988775 42 223334443 3333333321 24689999999999999999
Q ss_pred HHHcCCCEEEEeeccCCcCccccccceeecCCc-cccccccc-----------ccceEeccccCCCEEEEEeccccccHH
Q psy1963 86 SVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDK-RKDVKTYG-----------TKKLIEGVYEKGDKCVIIEDVVTSGSS 153 (250)
Q Consensus 86 A~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~-~~~~~~~~-----------~~~~i~g~~~~Gk~VlIVDDvitTG~T 153 (250)
|+.|++|+.+++|+++.... ....++...+.. .....+++ ....+.+. .+|++||||||+++||+|
T Consensus 210 A~~L~~pl~ii~k~r~~~~~-e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l~g~-v~Gk~viiVDDii~TG~T 287 (379)
T 2ji4_A 210 AERLRLGIAVIHGEAQDAES-DLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGD-VGGRIAIIVDDIIDDVDS 287 (379)
T ss_dssp HHHTTCEEEEEC------------------------------------------CCCEESC-CTTSEEEEEEEEECSCHH
T ss_pred HHHhCCCEEEEEEEeecccc-cccccccCCcccccccccccccchhhhhhhcccccccccC-CCCCEEEEEecCCCchHH
Confidence 99999999998776432100 000001000000 00000000 00123343 689999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEee
Q psy1963 154 ILETINDLKSVGIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 154 l~~a~~~L~~~Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~ 196 (250)
+.++++.|++.|++.+.+++.+... .++.+.|++.+++-+...
T Consensus 288 l~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~vvvT 331 (379)
T 2ji4_A 288 FLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVT 331 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEEEEe
Confidence 9999999999999999999988764 477888887665433333
No 26
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.70 E-value=1.6e-16 Score=141.11 Aligned_cols=162 Identities=10% Similarity=0.098 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHCCceeeCCccccCccccCeEeecc--cccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHH
Q psy1963 7 KLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLR--GIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATA 84 (250)
Q Consensus 7 ~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~--~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~ 84 (250)
..+-+++.|...|+-+.-.+.+++++...|| |.. .+...|. +++.+.+.+.+ .+.++|+|+..||+++|..
T Consensus 108 sak~vA~lL~~~G~drvit~DlH~~qiqgfF-~ipvd~l~a~p~----l~~~i~~~~~~--~~~~vVVspd~Ggv~~A~~ 180 (326)
T 3s5j_B 108 SAKLVANMLSVAGADHIITMDLHASQIQGFF-DIPVDNLYAEPA----VLKWIRENISE--WRNCTIVSPDAGGAKRVTS 180 (326)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCSSGGGGGGC-SSCEEEECSHHH----HHHHHHHHCTT--GGGCEEEESSGGGHHHHHH
T ss_pred eHHHHHHHHHHcCCCEEEEEeCCChHHHhhc-CCceeceEcHHH----HHHHHHHhcCc--CCCcEEEEECCCchHHHHH
Confidence 4577888888889888888999999888776 543 1222333 34444443321 1357999999999999999
Q ss_pred HHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 85 VSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 85 lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
+|..+|+|+.+++|.++..|.. +...+.+. .+|++|+||||+++||+|+.++++.|+++
T Consensus 181 lA~~L~~~~~~i~K~r~~~~~v--------------------~~~~l~g~-v~gk~viIVDDii~TG~Tl~~a~~~L~~~ 239 (326)
T 3s5j_B 181 IADRLNVDFALIHKERKKANEV--------------------DRMVLVGD-VKDRVAILVDDMADTCGTICHAADKLLSA 239 (326)
T ss_dssp HHHHHTCEEEEEEEC---------------------------CCEEEESC-CTTSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEEEEecCCCee--------------------eEEecccc-CCCCEEEEEccccCCcHHHHHHHHHHHHc
Confidence 9999999999999876543321 00224454 58999999999999999999999999999
Q ss_pred CCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEee
Q psy1963 165 GIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 165 Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~ 196 (250)
|++.+.+++.+... .++.++|++.+++-....
T Consensus 240 Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t 272 (326)
T 3s5j_B 240 GATRVYAILTHGIFSGPAISRINNACFEAVVVT 272 (326)
T ss_dssp TCSEEEEEEEEECCCTTHHHHHHHSCCSEEEEE
T ss_pred CCCEEEEEEEecccCchHHHHHhhCCCCEEEEe
Confidence 99999999988775 568888987776544433
No 27
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.70 E-value=2.4e-16 Score=125.52 Aligned_cols=116 Identities=16% Similarity=0.097 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEE-EEeec-cCCcCccccccceeecCCcccccc
Q psy1963 46 YPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPML-IRRKD-VKTYGTKKLIEGVYEKGDKRKDVK 123 (250)
Q Consensus 46 ~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~-~~rk~-~k~~g~~~~~~~~~~~~~~~~~~~ 123 (250)
+.+.+..+++.|++.+.+. ++|+|+|+++||+++|..+|..+++|++ +.++. .+.++.. ... .
T Consensus 7 s~~~~~~~~~~la~~i~~~--~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~---~~~----------~ 71 (153)
T 1vdm_A 7 TWWQVDRAIFALAEKLREY--KPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDER---GEK----------P 71 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHH--CCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CC---CSS----------C
T ss_pred CHHHHHHHHHHHHHHHHcc--CCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCccc---ccc----------e
Confidence 3444566788899888653 5899999999999999999999999964 34332 1111110 000 0
Q ss_pred cccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 124 TYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 124 ~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.+ ........+|++||||||++|||+|+.++++.|+++|++.+.+++++++..
T Consensus 72 ~~---~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 72 VI---TIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp EE---EECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred eE---eccCCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 00 111112358999999999999999999999999999999999999998874
No 28
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.70 E-value=1.7e-16 Score=132.58 Aligned_cols=134 Identities=15% Similarity=0.233 Sum_probs=99.9
Q ss_pred CccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCE--EEEeeccC
Q psy1963 25 DFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPM--LIRRKDVK 101 (250)
Q Consensus 25 ~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~--~~~rk~~k 101 (250)
+|. ++|... -|+..++-+++.++...+.|++.+.+. ..++++|+|++.||+++|..+|..+++|+ .++++..
T Consensus 19 ~f~-~~~~~~---~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~- 93 (204)
T 3hvu_A 19 YFQ-SNAMMN---QDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSS- 93 (204)
T ss_dssp CCC-CCCCGG---GGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEE-
T ss_pred CCC-Cchhhh---hcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEE-
Confidence 477 667633 356667778888888888899888764 23589999999999999999999999984 4555532
Q ss_pred CcCccccccceeecCCcccccccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 102 TYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 102 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
|+......+.. ....+ ...+|++||||||+++||+|+.++++.|++.|++.+.+++++++.+
T Consensus 94 -Y~~~~~~~~~v---------------~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 94 -YGHSTVSTGEV---------------KILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp -CSGGGTTSCCE---------------EEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred -ecCCCccCCcE---------------EEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 32210000000 11111 1258999999999999999999999999999999999999999874
No 29
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.69 E-value=1.2e-16 Score=134.20 Aligned_cols=131 Identities=10% Similarity=0.065 Sum_probs=92.2
Q ss_pred CeEeecccccCCHHHHHHHHHHHHHHHhhc-C------CCccEEEecCCCCHHHHHHHHHHc---CCCE--EEEeeccCC
Q psy1963 35 PVYLDLRGIISYPKLMDYLSTIINDYLNIN-K------ISARTVCGVPYTALPIATAVSVKY---NIPM--LIRRKDVKT 102 (250)
Q Consensus 35 ~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~------~~~d~Ivgv~~~Gi~~a~~lA~~l---~ip~--~~~rk~~k~ 102 (250)
++|.|+..++.+++.+...+..|++.+.+. . .++++|+|++.||+++|..+|+.+ ++|+ .+.++. .
T Consensus 18 ~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~--~ 95 (211)
T 1pzm_A 18 RNYPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICAS--S 95 (211)
T ss_dssp --CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC---
T ss_pred ccccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEee--e
Confidence 445577776777777777777888887643 1 357899999999999999999999 9994 445432 2
Q ss_pred cCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCcc
Q psy1963 103 YGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQG 180 (250)
Q Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~ 180 (250)
|+......+.. ... ..+. ...+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+.
T Consensus 96 y~~~~~~~~~~----------~~~--~~~~-~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 96 YGSGVETSGQV----------RML--LDVR-DSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp ----------------------CC--BCCS-SCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred ccCccccCCce----------EEe--ccCC-CCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 22110000000 000 1111 12589999999999999999999999999999999999999998743
No 30
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.69 E-value=3.2e-16 Score=129.25 Aligned_cols=124 Identities=13% Similarity=0.175 Sum_probs=92.4
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCEE--EEeeccCCcCccccccceeec
Q psy1963 39 DLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPML--IRRKDVKTYGTKKLIEGVYEK 115 (250)
Q Consensus 39 d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~--~~rk~~k~~g~~~~~~~~~~~ 115 (250)
|+..++.+++.++...+.|++.+.+. ..++++|+|++.||+++|..+|..+++|+. +++.. .|+......+..
T Consensus 7 di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~--~Y~~~~~~~~~v-- 82 (186)
T 3o7m_A 7 EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISAS--SYGNQTETTGKV-- 82 (186)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEE--ECC-------CE--
T ss_pred cccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEE--EecCCCcccCcE--
Confidence 44556667777888888888888764 236899999999999999999999999963 34442 233210000000
Q ss_pred CCcccccccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 116 GDKRKDVKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 116 ~~~~~~~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
....+ ...+|++||||||+++||+|+.++++.|+++|++.+.+++++++.+
T Consensus 83 -------------~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 83 -------------KLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp -------------EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred -------------EEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 11111 2258999999999999999999999999999999999999999873
No 31
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.68 E-value=5.9e-16 Score=135.45 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHH
Q psy1963 7 KLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVS 86 (250)
Q Consensus 7 ~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA 86 (250)
..+-+++.|... +-+.=.+.+++.+...|| |... .+-. .+..|++++.+ .+.++|+|++.||+++|..+|
T Consensus 103 sak~vA~ll~~~-~d~vit~DlH~~~iq~ff-~~pv--d~l~----~~~~la~~i~~--~~~~vVV~pd~Gg~~~A~~lA 172 (286)
T 3lrt_A 103 SSQILTEIYSSY-SNSIATVDIHDEKTLSYS-KVKF--SDLH----ANDAIVRYYKN--VDVDYVVSPDDGGLARVADIS 172 (286)
T ss_dssp HHHHHHHHHHHT-CSEEEEESCSCGGGGGGC-SSEE--EEEC----CHHHHHHHHTT--SCCSEEEESSSSSHHHHHHHH
T ss_pred cHHHHHHHHHHH-hCeEEEecCChHHHhhhc-CCcE--EEee----cHHHHHHHHHh--cCCCEEEEECCCccHHHHHHH
Confidence 456677777666 666666888888877654 5421 1111 12344555554 357999999999999999999
Q ss_pred HHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 87 VKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 87 ~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
..+|+|+++++|+++..|.. + .....+. .+|++|+||||+++||+|+.++++.|+++|+
T Consensus 173 ~~L~~p~~~i~K~r~~~g~v-------~-------------i~~~~~d-v~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga 231 (286)
T 3lrt_A 173 AKLGKKHFFIEKKRIDDRTV-------E-------------MKVPNVD-VNGKKLLIVDDIISTGGTIAKSSGLLREKGA 231 (286)
T ss_dssp HHHTCEEEEEEEEEETTEEE-------E-------------EEESCCC-CTTCEEEEEEEEESSCHHHHHHHHHHHHTTC
T ss_pred HHhCCCeEEEeeeecCCCcE-------E-------------Eeecccc-CCcCEEEEEeccccccHHHHHHHHHHHhCCC
Confidence 99999999999876443321 0 0112233 5899999999999999999999999999999
Q ss_pred eEEEEEEEEeCC-ccHHHHHHhcCCcEE
Q psy1963 167 VVTDVLTIVDRE-QGGRANLKQLGYTLH 193 (250)
Q Consensus 167 ~vv~~~vlvd~~-~~~~~~l~~~g~~v~ 193 (250)
+.+.+++.+... .++.++| +.|++-.
T Consensus 232 ~~v~~~~th~v~s~~a~~~l-~s~i~~v 258 (286)
T 3lrt_A 232 SKIYVSAVHGLFVNGSENKI-LQNADEI 258 (286)
T ss_dssp SEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred CEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence 999999999986 5778888 7776533
No 32
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.68 E-value=1.5e-16 Score=135.64 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=102.5
Q ss_pred ceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCC-------
Q psy1963 20 ALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNI------- 91 (250)
Q Consensus 20 ~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~i------- 91 (250)
++..++|...++ ++-|+..++.+++.+...++.|++.+.+. +.++++|+|++.||+++|..+|..++.
T Consensus 29 ~~~~~~F~~~~~----~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~ 104 (233)
T 1fsg_A 29 FYNADDFLVPPH----CKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGR 104 (233)
T ss_dssp CEEGGGSCCCTT----TTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSS
T ss_pred CCccccCccCCc----chhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCccccccc
Confidence 566778885433 33466777888988889999999988763 446899999999999999999999987
Q ss_pred -----C--EEEEeeccCCcCccccccceeecCCcccccccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHH
Q psy1963 92 -----P--MLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLK 162 (250)
Q Consensus 92 -----p--~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~ 162 (250)
| +.+++... |... ...+. ...... ...+|++||||||+++||+|+.++++.|+
T Consensus 105 k~~~~P~~~~~i~~~~--y~~~-~~~~~---------------~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~ 166 (233)
T 1fsg_A 105 ESSVPPFFEHYVRLKS--YQND-NSTGQ---------------LTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLK 166 (233)
T ss_dssp CCSSCSCEEEEEEEEE--EETT-EEEEE---------------EEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHH
T ss_pred ccCCCCcEEEEEEEEe--ccCc-ccccc---------------EEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHH
Confidence 6 33444321 1100 00000 011111 23589999999999999999999999999
Q ss_pred hCCCeEEEEEEEEeCCc
Q psy1963 163 SVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 163 ~~Ga~vv~~~vlvd~~~ 179 (250)
++|++.+.+++++++.+
T Consensus 167 ~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 167 AVGPKSMRIATLVEKRT 183 (233)
T ss_dssp TTCCSEEEEEEEEEECC
T ss_pred hcCCCEEEEEEEEECCc
Confidence 99999999999998763
No 33
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.67 E-value=4.6e-16 Score=128.07 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=88.9
Q ss_pred cccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCE--EEEeeccCCcCccccccceeecCCc
Q psy1963 42 GIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPM--LIRRKDVKTYGTKKLIEGVYEKGDK 118 (250)
Q Consensus 42 ~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~--~~~rk~~k~~g~~~~~~~~~~~~~~ 118 (250)
.++.+++.+...+..|++.+.+. ..++++|+|++.||+++|..+|..+++|+ .+.+... ++......+..
T Consensus 14 ~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~--y~~~~~~~~~~----- 86 (185)
T 2geb_A 14 EILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSS--YGSSTKSSGIV----- 86 (185)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEE--CSTTHHHHCCE-----
T ss_pred eEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEe--cCCCCccCccE-----
Confidence 34556666777778888888753 23689999999999999999999999996 4444221 22110000000
Q ss_pred ccccccccccceEe--ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 119 RKDVKTYGTKKLIE--GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 119 ~~~~~~~~~~~~i~--g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.... ....+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus 87 ----------~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 87 ----------KIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp ----------EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ----------EEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 1111 12358999999999999999999999999999999999999999874
No 34
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.65 E-value=9e-16 Score=130.16 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=97.2
Q ss_pred eeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcC---------C
Q psy1963 22 KFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYN---------I 91 (250)
Q Consensus 22 ~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~---------i 91 (250)
..++|++.++.. -|++.++.+++.+...+..|++.+.+. +.++++|+|++.||+++|..+|..++ +
T Consensus 25 ~~~~F~~~~~~~----~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~ 100 (225)
T 2jbh_A 25 DLNLFTYPQHYY----GDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFV 100 (225)
T ss_dssp CGGGSCCCGGGT----TSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CHHHCccCcccc----ccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCC
Confidence 345688654432 255566777877888888899888763 44689999999999999999999998 6
Q ss_pred CE--EEEeeccCCcCccccccceeecCCcccccccccccceEe--c-cccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 92 PM--LIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIE--G-VYEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 92 p~--~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~--g-~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
|+ .+++.. .|... ...+. ..... . ...+|++||||||+++||+|+.++++.|+++|+
T Consensus 101 p~~~~~i~~~--~y~~~-~~~~~---------------~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga 162 (225)
T 2jbh_A 101 SMKVDFIRLK--SYRND-QSMGE---------------MQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKP 162 (225)
T ss_dssp CEEEEEEEEC----------------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCC
T ss_pred CceEEEEEEE--eccCc-ccccc---------------EEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC
Confidence 74 445442 12110 00000 01111 0 235899999999999999999999999999999
Q ss_pred eEEEEEEEEeCCc
Q psy1963 167 VVTDVLTIVDREQ 179 (250)
Q Consensus 167 ~vv~~~vlvd~~~ 179 (250)
+.+.+++++++.+
T Consensus 163 ~~V~va~l~~k~~ 175 (225)
T 2jbh_A 163 NMIKVASLLVKRT 175 (225)
T ss_dssp SEEEEEEEEEECC
T ss_pred CEEEEEEEEECCc
Confidence 9999999998653
No 35
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.65 E-value=2e-15 Score=127.56 Aligned_cols=124 Identities=11% Similarity=0.115 Sum_probs=87.4
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhhc-CCCc-------cEEEecCCCCHHHHHHHHHHc---CCCE--EEEeeccCCcCc
Q psy1963 39 DLRGIISYPKLMDYLSTIINDYLNIN-KISA-------RTVCGVPYTALPIATAVSVKY---NIPM--LIRRKDVKTYGT 105 (250)
Q Consensus 39 d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~-------d~Ivgv~~~Gi~~a~~lA~~l---~ip~--~~~rk~~k~~g~ 105 (250)
|+..++-+++.+...++.|++.+.+. .... ++|+|++.||+++|..+|..+ ++|+ .+.+.. .|+.
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~--~y~~ 83 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVS--SYGE 83 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEE--CC--
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEe--ecCC
Confidence 34444556666777777888777643 2123 899999999999999999999 9994 344432 2321
Q ss_pred cccccceeecCCcccccccccccceEe--ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 106 KKLIEGVYEKGDKRKDVKTYGTKKLIE--GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~i~--g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.....+.. .... ....+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus 84 ~~~~~~~v---------------~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 84 GLTSSGQV---------------RMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp -------C---------------EEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred CcccCCcE---------------EEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 10000000 1111 12258999999999999999999999999999999999999998874
No 36
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.65 E-value=1.6e-15 Score=134.83 Aligned_cols=154 Identities=12% Similarity=0.123 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHCCceeeCCccccCccccCeEeecc--cccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHH
Q psy1963 7 KLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLR--GIISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATA 84 (250)
Q Consensus 7 ~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~--~~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~ 84 (250)
..+.+++.|...|+-+...+.+++++...+| |.. .+..- ..+++++.+.+.+..+|++++.||+++|..
T Consensus 114 ~a~~~a~ll~~~g~~~vit~dlH~~q~~~~f-~~p~d~l~a~--------p~l~~~l~~r~~~~~vVv~pd~Gg~~~A~~ 184 (317)
T 1dku_A 114 TAKLFANLLETAGATRVIALDLHAPQIQGFF-DIPIDHLMGV--------PILGEYFEGKNLEDIVIVSPDHGGVTRARK 184 (317)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCSSGGGGGGC-SSCEEEECSH--------HHHHHHHHTTTCCSEEEEESSGGGHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccCchhhhccc-CCCceEEEeh--------HHHHHHHHhhcCCCcEEEEeCcchHHHHHH
Confidence 3677889999999988888999998877765 432 22222 334455554444567999999999999999
Q ss_pred HHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 85 VSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 85 lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
+|..+++|+.+.+|.++..+.. +. ..+.+. .+|++|+||||++|||+|+.++++.|+++
T Consensus 185 la~~L~~p~~~l~k~r~~~~~~----~~----------------~~l~~~-v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~ 243 (317)
T 1dku_A 185 LADRLKAPIAIIDKRRPRPNVA----EV----------------MNIVGN-IEGKTAILIDDIIDTAGTITLAANALVEN 243 (317)
T ss_dssp HHHHTTCCEEEEECC-----------------------------CEEESC-CTTCEEEEECSEESSCHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEEEEeccccce----eE----------------EEeccc-CCCCEEEEEecccCCCHHHHHHHHHHHHc
Confidence 9999999998887764321111 00 223343 58999999999999999999999999999
Q ss_pred CCeEEEEEEEEeCC-ccHHHHHHhcCC
Q psy1963 165 GIVVTDVLTIVDRE-QGGRANLKQLGY 190 (250)
Q Consensus 165 Ga~vv~~~vlvd~~-~~~~~~l~~~g~ 190 (250)
|++.+.+++.+... .++.++|++.++
T Consensus 244 Ga~~V~~~~tH~v~~~~a~~~l~~~~i 270 (317)
T 1dku_A 244 GAKEVYACCTHPVLSGPAVERINNSTI 270 (317)
T ss_dssp TCSEEEEECSEECCCTTHHHHHHTSSE
T ss_pred CCcEEEEEEECcccChHHHHHHhhCCC
Confidence 99999999833332 246677765443
No 37
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.65 E-value=6.5e-16 Score=129.13 Aligned_cols=120 Identities=18% Similarity=0.278 Sum_probs=87.3
Q ss_pred ccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCE--EEEeeccCCcCccccccceeecCCcc
Q psy1963 43 IISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPM--LIRRKDVKTYGTKKLIEGVYEKGDKR 119 (250)
Q Consensus 43 ~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~--~~~rk~~k~~g~~~~~~~~~~~~~~~ 119 (250)
++.+++.+...+..|++.+.+. ..++|+|+|++.||+++|..+|..+++|+ .+.++. .++......+..
T Consensus 35 ~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~--~y~~~~~~~~~~------ 106 (205)
T 1yfz_A 35 ILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVS--SYGSSTKSSGIV------ 106 (205)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEE--ECSHHHHHHCCE------
T ss_pred EEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEE--eccCCccccceE------
Confidence 3445555666777788888653 23589999999999999999999999995 344432 122110000000
Q ss_pred cccccccccceEe--ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 120 KDVKTYGTKKLIE--GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 120 ~~~~~~~~~~~i~--g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.... ....+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus 107 ---------~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 107 ---------KIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp ---------EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ---------EEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 1111 11358999999999999999999999999999999999999999874
No 38
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.65 E-value=6.2e-16 Score=126.59 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=85.8
Q ss_pred cccccCCHHHHHHHHHHHHHHHhhcC--CCccEEEecCCCCHHHHHHHHHHcC----CC--EEEEeeccCCcCccccccc
Q psy1963 40 LRGIISYPKLMDYLSTIINDYLNINK--ISARTVCGVPYTALPIATAVSVKYN----IP--MLIRRKDVKTYGTKKLIEG 111 (250)
Q Consensus 40 ~~~~~~~p~~~~~l~~~la~~i~~~~--~~~d~Ivgv~~~Gi~~a~~lA~~l~----ip--~~~~rk~~k~~g~~~~~~~ 111 (250)
...++.+++.+..+...|++.+.+.. .++|+|+|++.+|+++|..+|..++ +| +.+.++.. +.......+
T Consensus 3 ~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~--~~~~~~~~~ 80 (181)
T 1a3c_A 3 QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITL--YRDDLSKKT 80 (181)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEC--CC-------
T ss_pred cccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEE--ecCcccccC
Confidence 34455677777778888888887642 2689999999999999999999987 44 44443321 111100000
Q ss_pred eeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCC-CeEEEEEEEEeCC
Q psy1963 112 VYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVG-IVVTDVLTIVDRE 178 (250)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G-a~vv~~~vlvd~~ 178 (250)
. .+..... ...+. ...+|++||||||++|||+|+.++++.|+++| ++.+.+++++++.
T Consensus 81 ~-------~~~~~~~-~~~~~-~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 81 S-------NDEPLVK-GADIP-VDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp --------CCCCEEE-EEECS-SCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred c-------cceeeec-ccccC-cCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 0 0000000 00111 12589999999999999999999999999997 9999999999887
No 39
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.63 E-value=5.2e-15 Score=121.04 Aligned_cols=117 Identities=10% Similarity=0.144 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHHHHHHhhcC-CCc-cEEEecCCCCHHHHHHHHHHcCCCE--EEEeeccCCcCccccccceeecCCcccc
Q psy1963 46 YPKLMDYLSTIINDYLNINK-ISA-RTVCGVPYTALPIATAVSVKYNIPM--LIRRKDVKTYGTKKLIEGVYEKGDKRKD 121 (250)
Q Consensus 46 ~p~~~~~l~~~la~~i~~~~-~~~-d~Ivgv~~~Gi~~a~~lA~~l~ip~--~~~rk~~k~~g~~~~~~~~~~~~~~~~~ 121 (250)
+++......+.|++.+.+.. ... ++|+|++.||+++|..+|..+++|+ .+++.. .|+......+..
T Consensus 10 s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~--~y~~~~~~~~~v-------- 79 (177)
T 3ohp_A 10 SEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTAS--SYGNSMQSSRDV-------- 79 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEC--C--------CCC--------
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEE--EEcCCCccCCcE--------
Confidence 44445556677888777643 234 8999999999999999999999985 445543 232210000000
Q ss_pred cccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 122 VKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 122 ~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
..... ...+|++||||||+++||+|+.++++.|++.|++.+.+++++++..
T Consensus 80 -------~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 80 -------RILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPT 132 (177)
T ss_dssp -------CEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred -------EEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCc
Confidence 11111 1258999999999999999999999999999999999999999973
No 40
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.61 E-value=6.6e-15 Score=124.17 Aligned_cols=140 Identities=13% Similarity=0.072 Sum_probs=96.9
Q ss_pred EeecccccCCHHHHHHHHHHHHHHHhh-cCCCccEEEecCCCCHHHHHHHHHHcC---------CCE--EEEeeccCCcC
Q psy1963 37 YLDLRGIISYPKLMDYLSTIINDYLNI-NKISARTVCGVPYTALPIATAVSVKYN---------IPM--LIRRKDVKTYG 104 (250)
Q Consensus 37 y~d~~~~~~~p~~~~~l~~~la~~i~~-~~~~~d~Ivgv~~~Gi~~a~~lA~~l~---------ip~--~~~rk~~k~~g 104 (250)
+-|++.++.+++.++...+.|++.+.+ .+.+.++|+|+++||+++|..+|+.|+ +|+ .+++.. .|.
T Consensus 28 ~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~~i~~~--~y~ 105 (217)
T 1z7g_A 28 AEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLK--SYC 105 (217)
T ss_dssp TTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEEEECBC-----
T ss_pred ccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeeeeEEEE--Eec
Confidence 446667778888888888899988874 334689999999999999999999998 674 344421 121
Q ss_pred ccccccceeecCCcccccccccccceEe---ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccH
Q psy1963 105 TKKLIEGVYEKGDKRKDVKTYGTKKLIE---GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGG 181 (250)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~---g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~ 181 (250)
.. ...+.. .... -...+|++||||||+++||+|+.++++.|++.|++.+.+++++++.+.
T Consensus 106 ~~-~~~~~~---------------~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~~- 168 (217)
T 1z7g_A 106 ND-QSTGDI---------------KVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTP- 168 (217)
T ss_dssp --------C---------------CBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC--
T ss_pred cc-ccccce---------------EEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECccc-
Confidence 10 000000 1111 023589999999999999999999999999999999999999987643
Q ss_pred HHHHHhcCCcEEEeec
Q psy1963 182 RANLKQLGYTLHSLFT 197 (250)
Q Consensus 182 ~~~l~~~g~~v~sl~~ 197 (250)
++...-..++++..
T Consensus 169 --~~~~~~~dyvg~~~ 182 (217)
T 1z7g_A 169 --RSVGYKPDFVGFEI 182 (217)
T ss_dssp ------CCCSEEEEEE
T ss_pred --ccCCCCCcEEEEEc
Confidence 22233344555443
No 41
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.60 E-value=6.7e-15 Score=122.72 Aligned_cols=131 Identities=15% Similarity=0.168 Sum_probs=87.6
Q ss_pred cCeEeecccccCCHHHHHHHHHHHHHHHhhc-C--------CCccEEEecCCCCHHHHHHHHHHc----CCCE--EEEee
Q psy1963 34 TPVYLDLRGIISYPKLMDYLSTIINDYLNIN-K--------ISARTVCGVPYTALPIATAVSVKY----NIPM--LIRRK 98 (250)
Q Consensus 34 s~~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~--------~~~d~Ivgv~~~Gi~~a~~lA~~l----~ip~--~~~rk 98 (250)
.|.|.+.+ ++.+++.+....+.|+..+.+. . .+.++|+|++.+|+++|..+|+.+ ++|+ .+++.
T Consensus 7 ~~~~~~~~-~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~ 85 (201)
T 1w30_A 7 AAIGRESR-ELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDI 85 (201)
T ss_dssp -----CEE-EEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCCcce-EEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEE
Confidence 45665544 4557777777888888887653 2 257899999999999999999998 5774 33332
Q ss_pred ccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCC-CeEEEEEEEEeC
Q psy1963 99 DVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVG-IVVTDVLTIVDR 177 (250)
Q Consensus 99 ~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G-a~vv~~~vlvd~ 177 (250)
. .|.......+.. ...+ ..+.....+|++||||||++|||+|+.++++.|+++| ++.+.+++++++
T Consensus 86 ~--~y~~~~~~~~~~--------~~~~---~~~~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k 152 (201)
T 1w30_A 86 T--LYRDDLMIKPPR--------PLAS---TSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDR 152 (201)
T ss_dssp G--GGCC----------------CCCC---CBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEEC
T ss_pred E--EecCCccccccc--------eeec---ccCCCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEec
Confidence 1 122110000000 0000 1111222589999999999999999999999999999 999999999999
Q ss_pred C
Q psy1963 178 E 178 (250)
Q Consensus 178 ~ 178 (250)
+
T Consensus 153 ~ 153 (201)
T 1w30_A 153 G 153 (201)
T ss_dssp C
T ss_pred C
Confidence 6
No 42
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.59 E-value=3.9e-15 Score=118.80 Aligned_cols=111 Identities=13% Similarity=0.161 Sum_probs=82.6
Q ss_pred cCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCC-EEEEeeccCCcCccccccceeecCCccccc
Q psy1963 44 ISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIP-MLIRRKDVKTYGTKKLIEGVYEKGDKRKDV 122 (250)
Q Consensus 44 ~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip-~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~ 122 (250)
+-+++.+...+..|++.+.+.. ++|+|+|++.||+++|..+|..+++| +.+.+... |+.. ..+.
T Consensus 6 l~~~~~i~~~~~~La~~i~~~~-~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~--y~~~--~~~~---------- 70 (152)
T 1nul_A 6 IVTWDMLQIHARKLASRLMPSE-QWKGIIAVSRGGLVPGALLARELGIRHVDTVCISS--YDHD--NQRE---------- 70 (152)
T ss_dssp ECCHHHHHHHHHHHHHHHCSGG-GCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC----------------------
T ss_pred ecCHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEE--ecCc--ccce----------
Confidence 4456667777888999887632 46899999999999999999999999 76665331 2111 0000
Q ss_pred ccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 123 KTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 123 ~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.....+...+|++||||||+++||+|+.++++.|++ +.+++++++..
T Consensus 71 -----~~~~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~ 117 (152)
T 1nul_A 71 -----LKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPA 117 (152)
T ss_dssp -----CEEEECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGG
T ss_pred -----EEEecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCC
Confidence 022333335899999999999999999999999986 78899999973
No 43
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.57 E-value=1.1e-14 Score=124.96 Aligned_cols=126 Identities=12% Similarity=0.114 Sum_probs=93.3
Q ss_pred eEeecccccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcC------------CCEE--EEeecc
Q psy1963 36 VYLDLRGIISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYN------------IPML--IRRKDV 100 (250)
Q Consensus 36 ~y~d~~~~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~------------ip~~--~~rk~~ 100 (250)
++-|+..++-+++.++...+.||+.+.+. ..+.++|+|++.||+++|..+|..++ +|+- +++..
T Consensus 55 ~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~fI~~s- 133 (250)
T 3ozf_A 55 YKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVK- 133 (250)
T ss_dssp GGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEEEEEEE-
T ss_pred hhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEEEEEEE-
Confidence 44466667778888888888899888754 33579999999999999999999987 6642 23321
Q ss_pred CCcCccccccceeecCCcccccccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCC
Q psy1963 101 KTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDRE 178 (250)
Q Consensus 101 k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~ 178 (250)
.|... ...+.. ....+ ...+|++||||||+++||+|+.++++.|++.|++.+.+++++++.
T Consensus 134 -sY~~~-~s~g~v---------------~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~ 196 (250)
T 3ozf_A 134 -SYCND-QSTGTL---------------EIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKR 196 (250)
T ss_dssp -EEETT-EEEEEE---------------EEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEEC
T ss_pred -EecCC-cccCcE---------------EEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECC
Confidence 12111 000000 11111 124899999999999999999999999999999999999999987
Q ss_pred c
Q psy1963 179 Q 179 (250)
Q Consensus 179 ~ 179 (250)
+
T Consensus 197 ~ 197 (250)
T 3ozf_A 197 T 197 (250)
T ss_dssp C
T ss_pred c
Confidence 4
No 44
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.57 E-value=8e-15 Score=120.07 Aligned_cols=120 Identities=15% Similarity=0.140 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHHHhhc--CCCccEEEecCCCCHHHHHHHHHHcC----CCEE--EEeeccCCcCccccccceeecCC
Q psy1963 46 YPKLMDYLSTIINDYLNIN--KISARTVCGVPYTALPIATAVSVKYN----IPML--IRRKDVKTYGTKKLIEGVYEKGD 117 (250)
Q Consensus 46 ~p~~~~~l~~~la~~i~~~--~~~~d~Ivgv~~~Gi~~a~~lA~~l~----ip~~--~~rk~~k~~g~~~~~~~~~~~~~ 117 (250)
+++.+......|++.+.+. +.+.++|+|++.+|+++|..+|..++ +|+. +.++.. |.......+.
T Consensus 9 ~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~--~~~~~~~~~~----- 81 (181)
T 1ufr_A 9 NAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITL--YRDDLTEIGY----- 81 (181)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC-----------------
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEE--ecCccccccc-----
Confidence 4445555666677777543 22467999999999999999999887 7752 343321 1110000000
Q ss_pred cccccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCC-CeEEEEEEEEeCC
Q psy1963 118 KRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVG-IVVTDVLTIVDRE 178 (250)
Q Consensus 118 ~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G-a~vv~~~vlvd~~ 178 (250)
...+. ...+... .+|++||||||++|||+|+.++++.|+++| ++.+.+++++++.
T Consensus 82 ----~~~~~-~~~~~~~-~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 82 ----RPQVR-ETRIPFD-LTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp -----CEEE-EEEECSC-CTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ----cceec-ccccCcC-CCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00000 0112222 589999999999999999999999999999 8999999999887
No 45
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.48 E-value=1.5e-13 Score=116.12 Aligned_cols=124 Identities=10% Similarity=0.146 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCC------CEEEEeeccCCcCccccccceeecCCcc
Q psy1963 46 YPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNI------PMLIRRKDVKTYGTKKLIEGVYEKGDKR 119 (250)
Q Consensus 46 ~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~i------p~~~~rk~~k~~g~~~~~~~~~~~~~~~ 119 (250)
+.+-+...+..|++.+. +.++++|+|+++||+++|..+|..|++ |+.+++.. .|+..........+. .
T Consensus 10 s~~~i~~~i~~LA~~I~--~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s--~y~~~~~~~~~~~~~--g 83 (221)
T 2xbu_A 10 SYNNVHQLCQVSAERIK--NFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILS--LYEDLNSVGSEVEEV--G 83 (221)
T ss_dssp CHHHHHHHHHHHHHHHT--TTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEE--EEC---------------
T ss_pred CHHHHHHHHHHHHHHhc--cCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEE--EecCCcccccccccc--C
Confidence 34445667788998883 336899999999999999999999998 45555432 122110000000000 0
Q ss_pred cccccccccceEe----ccccCCCEEEEEeccccccHHHHHHHHHHHh--------CCC---------eEEEEEEEEeCC
Q psy1963 120 KDVKTYGTKKLIE----GVYEKGDKCVIIEDVVTSGSSILETINDLKS--------VGI---------VVTDVLTIVDRE 178 (250)
Q Consensus 120 ~~~~~~~~~~~i~----g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~--------~Ga---------~vv~~~vlvd~~ 178 (250)
... . +....+ ....+|++||||||+++||.|+.++++.|++ .|+ ..+.++|++++.
T Consensus 84 ~~~--~-~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~ 160 (221)
T 2xbu_A 84 VKV--S-RTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQ 160 (221)
T ss_dssp CEE--E-EEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEEC
T ss_pred cee--e-eeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEecc
Confidence 000 0 000011 2236899999999999999999999999997 776 578899999987
No 46
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.46 E-value=1.1e-12 Score=123.40 Aligned_cols=150 Identities=13% Similarity=0.171 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHhhc--CCCccEEEecCCCCHHHHHHHHHHcCCCEE--EEeeccCCcCccccccceeecCCccccccc
Q psy1963 49 LMDYLSTIINDYLNIN--KISARTVCGVPYTALPIATAVSVKYNIPML--IRRKDVKTYGTKKLIEGVYEKGDKRKDVKT 124 (250)
Q Consensus 49 ~~~~l~~~la~~i~~~--~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~--~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~ 124 (250)
....+++.|++.+.+. +.++|+|+++|.+|+++|..+|..+++|+. +.+++ ..+...+....-. ... .
T Consensus 274 ~r~~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r--~~~~t~i~~~~~~-----R~~-~ 345 (504)
T 1ecf_A 274 ARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNR--YVGRTFIMPGQQL-----RRK-S 345 (504)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECS--CCCCCCCCSSSCC-----CCC-C
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEec--ccCCceeCccHHH-----HHH-H
Confidence 4556778888877653 235899999999999999999999999985 44432 1121100000000 000 0
Q ss_pred ccccce-EeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEE-----------eCCcc--------HHHH
Q psy1963 125 YGTKKL-IEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIV-----------DREQG--------GRAN 184 (250)
Q Consensus 125 ~~~~~~-i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlv-----------d~~~~--------~~~~ 184 (250)
. +..+ ......+||+||||||++|||+|+.+++++|+++||+.+.++++. +.+.. ..+.
T Consensus 346 v-~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~p~~~gi~~~~~~~lv~~~~~~~e 424 (504)
T 1ecf_A 346 V-RRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDE 424 (504)
T ss_dssp S-TTTEEECGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCCSCCCSSCCCCCGGGCTTTTCCHHH
T ss_pred H-HhhhccccccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecCcccCCeEEEEcCChHHeEEcCCCHHH
Confidence 0 0011 112236899999999999999999999999999999998888862 22211 0122
Q ss_pred -HHhcCCcEEEeecHHHHHHHHHH
Q psy1963 185 -LKQLGYTLHSLFTLSSVMDILYK 207 (250)
Q Consensus 185 -l~~~g~~v~sl~~~~~l~~~~~~ 207 (250)
-+..|.+-...++++++++.+.+
T Consensus 425 ~~~~~~~~~l~~~s~~~l~~~~~~ 448 (504)
T 1ecf_A 425 IRQIIGADGLIFQDLNDLIDAVRA 448 (504)
T ss_dssp HHHHHTCSEEEECCHHHHHHHHHT
T ss_pred HHHHcCCCEEEEEcHHHHHHHhcc
Confidence 23468888899999999988875
No 47
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.44 E-value=1.6e-12 Score=106.50 Aligned_cols=121 Identities=12% Similarity=0.183 Sum_probs=83.5
Q ss_pred ccCCHHHHHHHHHHHHHHHhhc-CCCccEEEecCCCCHHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccc
Q psy1963 43 IISYPKLMDYLSTIINDYLNIN-KISARTVCGVPYTALPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKD 121 (250)
Q Consensus 43 ~~~~p~~~~~l~~~la~~i~~~-~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~ 121 (250)
++-+.+-.+...+.||..|.+. ..+..+++|+..||+++|.-+++.++.|.....-...+|+.....++..
T Consensus 12 vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~~~~~g~~-------- 83 (181)
T 3acd_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFKSSGEV-------- 83 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC--------------------
T ss_pred EEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCCcCCCCce--------
Confidence 3445555555666777777654 2355689999999999999999999999543322223343220001110
Q ss_pred cccccccceEec--cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCC
Q psy1963 122 VKTYGTKKLIEG--VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDRE 178 (250)
Q Consensus 122 ~~~~~~~~~i~g--~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~ 178 (250)
....+ ....|++|||||||+.||.|+.++.+.|.+.|++.+.++|++++.
T Consensus 84 -------~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~ 135 (181)
T 3acd_A 84 -------ELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp -------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred -------EeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence 11111 236899999999999999999999999999999999999999864
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.40 E-value=3.1e-12 Score=119.02 Aligned_cols=148 Identities=14% Similarity=0.259 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEE--EEeeccCCcCccccccceeecCCccccccccc
Q psy1963 49 LMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPML--IRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYG 126 (250)
Q Consensus 49 ~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~--~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~ 126 (250)
....+++.|++.+. .+.|+|+++|.+|.++|..+|..+|+|+. +.|++. .+........-. +....-.
T Consensus 258 ~r~~lg~~La~~~~---~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~--~~~~~~~~~~~~-----R~~~~~~ 327 (459)
T 1ao0_A 258 ARKNLGKMLAQESA---VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRY--VGRTFIQPSQAL-----REQGVRM 327 (459)
T ss_dssp HHHHHHHHHHHHHC---CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTT--CCTTSCCCCHHH-----HHHTCCS
T ss_pred HHHHHHHHHHHhcc---cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecC--CCccccCCCHHH-----HHhhhhh
Confidence 56677777777664 25799999999999999999999999986 344321 111100000000 0000000
Q ss_pred ccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEE-----------EeCC---c--cH---HHHH-H
Q psy1963 127 TKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTI-----------VDRE---Q--GG---RANL-K 186 (250)
Q Consensus 127 ~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vl-----------vd~~---~--~~---~~~l-~ 186 (250)
.+..+.+ ..+||+||||||++|||+|+.++++.|+++||+.+.++++ +|.+ + .. .+.+ +
T Consensus 328 ~~~~~~~-~v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~pp~~~~~~~gid~~~~~~li~~~~~~~~i~~ 406 (459)
T 1ao0_A 328 KLSAVRG-VVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVEEIRQ 406 (459)
T ss_dssp SEEECHH-HHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCCSCCCSCTTTCCSSCCSTTTSCHHHHHH
T ss_pred hcccccc-cCCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEecCCccccceeeecCCCHHHhhccCCCHHHHHH
Confidence 0111122 3589999999999999999999999999999999998885 2311 1 01 1223 2
Q ss_pred hcCCcEEEeecHHHHHHHHHH
Q psy1963 187 QLGYTLHSLFTLSSVMDILYK 207 (250)
Q Consensus 187 ~~g~~v~sl~~~~~l~~~~~~ 207 (250)
..+.+...+++++++++.+.+
T Consensus 407 ~~~~~~l~~~s~~~l~~~~~~ 427 (459)
T 1ao0_A 407 EIGADTLSFLSVEGLLKGIGR 427 (459)
T ss_dssp HHTCSEEEECCHHHHHHHHTC
T ss_pred HhCcCEEEEEcHHHHHHHhcC
Confidence 468888999999999888754
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.23 E-value=1.9e-11 Score=103.66 Aligned_cols=113 Identities=15% Similarity=0.168 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHHHhhc-CC--CccEEEecCCCCHHHHHHHHHHcCCCEEE--EeeccCCcCccccccceeecCCccc
Q psy1963 46 YPKLMDYLSTIINDYLNIN-KI--SARTVCGVPYTALPIATAVSVKYNIPMLI--RRKDVKTYGTKKLIEGVYEKGDKRK 120 (250)
Q Consensus 46 ~p~~~~~l~~~la~~i~~~-~~--~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~--~rk~~k~~g~~~~~~~~~~~~~~~~ 120 (250)
+.+.....+..||+.+.+. .. +.++|+|++.||+++|..+|+.+++|+.+ .+.. .|+.. ...+ ..
T Consensus 37 s~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs--~y~~~-~s~~-v~------ 106 (230)
T 1dqn_A 37 TFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS--SYKGT-RQES-VV------ 106 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE--EEECS-SCEE-EE------
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE--EeCCC-ccCc-eE------
Confidence 4444556667777777643 22 56899999999999999999999999743 3322 23111 0000 00
Q ss_pred ccccccccceEeccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc
Q psy1963 121 DVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ 179 (250)
Q Consensus 121 ~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~ 179 (250)
.+ ...+.+ ..+||+||||||+++||.|+.++++.|++ +.+++++++..
T Consensus 107 ---i~--~~~l~~-~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 107 ---FD--EEDLKQ-LKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp ---CC--HHHHHH-HHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred ---EE--eccCcc-CCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 00 010111 25899999999999999999999999988 77888999884
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.92 E-value=4.3e-09 Score=87.96 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=71.9
Q ss_pred ccEEEecCCCCHHHHHHHHHHc-CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEec
Q psy1963 68 ARTVCGVPYTALPIATAVSVKY-NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIED 146 (250)
Q Consensus 68 ~d~Ivgv~~~Gi~~a~~lA~~l-~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDD 146 (250)
..+++++-++|++++..+.+.+ +.++..+...+.. ... ....+ | ..+.+ ..+|++|+||||
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~-~t~--~~~~~-----------~---~~lp~-~i~~~~VllvDd 132 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP-QTL--KPVEY-----------Y---VKLPS-DVEERDFIIVDP 132 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT-TCS--SCEEE-----------E---EECCT-TTTTSEEEEECS
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC-CCC--ceEEE-----------E---EcCCC-ccCCCEEEEEcC
Confidence 4578999999999999999987 4554433332111 111 00000 0 11112 357999999999
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcC
Q psy1963 147 VVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLG 189 (250)
Q Consensus 147 vitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g 189 (250)
+++||+|+.++++.|++.|++.+.+++++... .+.+.+.+..
T Consensus 133 ~l~TG~T~~~a~~~L~~~G~~~I~~~~lv~~~-~g~~~l~~~~ 174 (209)
T 1i5e_A 133 MLATGGSAVAAIDALKKRGAKSIKFMCLIAAP-EGVKAVETAH 174 (209)
T ss_dssp EESSSHHHHHHHHHHHHTTCCCEEEECSEECH-HHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEEEEEECH-HHHHHHHHhC
Confidence 99999999999999999999988888887766 4667776543
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.90 E-value=5e-09 Score=88.12 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=72.6
Q ss_pred cEEEecCCCCHHHHHHHHHHc-CCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEecc
Q psy1963 69 RTVCGVPYTALPIATAVSVKY-NIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDV 147 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l-~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDv 147 (250)
-+++++.++|++++..+++.+ +.++..+...+.. .+. ....+ | ..+.+ ..+|++|+||||+
T Consensus 84 lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~-~t~--~~~~~-----------~---~~lp~-di~gr~VilvDd~ 145 (221)
T 1o5o_A 84 IVVVPILRAGLVMADGILELLPNASVGHIGIYRDP-ETL--QAVEY-----------Y---AKLPP-LNDDKEVFLLDPM 145 (221)
T ss_dssp EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECT-TTC--CEEEE-----------E---EECCC-CCTTCEEEEECSE
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcC-CCC--ceeEE-----------E---ecCCC-ccCCCEEEEECCc
Confidence 378999999999999999998 5555443332111 111 00000 0 11112 2589999999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcC
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLG 189 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g 189 (250)
++||+|+.++++.|++.|++.+.+++++... .+.++|.+..
T Consensus 146 laTG~Tl~~ai~~L~~~G~~~I~~~~lv~~~-~g~~~l~~~~ 186 (221)
T 1o5o_A 146 LATGVSSIKAIEILKENGAKKITLVALIAAP-EGVEAVEKKY 186 (221)
T ss_dssp ESSSHHHHHHHHHHHHTTCCEEEEECSEECH-HHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEEEEEeCH-HHHHHHHHHC
Confidence 9999999999999999999988888888876 4677776543
No 52
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.73 E-value=9e-08 Score=79.77 Aligned_cols=98 Identities=11% Similarity=0.186 Sum_probs=69.8
Q ss_pred cEEEecCCCCHHHHHHHHHHcC-CCE--EEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEe
Q psy1963 69 RTVCGVPYTALPIATAVSVKYN-IPM--LIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIE 145 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l~-ip~--~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVD 145 (250)
-+++++-++|++++..+.+.+. .++ +-..+. .+.+.. ..+ |. .+. ..+|++|+|||
T Consensus 70 ~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd-~~t~~~----~~~-----------~~--~lp---di~~r~vilvD 128 (208)
T 2e55_A 70 IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRN-EETLES----HIY-----------YS--RLP---ELKGKIVVILD 128 (208)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCEECEEEEEEC-TTTCCE----EEE-----------EE--ECC---CCBTSEEEEEC
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEe-cCCCce----EEE-----------ec--CCC---CCCCCEEEEEC
Confidence 4789999999999999999875 222 222221 111110 000 10 222 35799999999
Q ss_pred ccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhc
Q psy1963 146 DVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQL 188 (250)
Q Consensus 146 DvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~ 188 (250)
|+++||+|+.++++.|++.|++.+.+++++... .+.+++.+.
T Consensus 129 d~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~-~g~~~l~~~ 170 (208)
T 2e55_A 129 PMLATGGTLEVALREILKHSPLKVKSVHAIAAP-EGLKRIEEK 170 (208)
T ss_dssp SEESSSHHHHHHHHHHHTTCBSEEEEEEEEECH-HHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEEEEEEECH-HHHHHHHHH
Confidence 999999999999999999999999999998877 567777653
No 53
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.70 E-value=8.7e-08 Score=79.86 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=69.5
Q ss_pred cEEEecCCCCHHHHHHHHHHcC-CC--EEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEe
Q psy1963 69 RTVCGVPYTALPIATAVSVKYN-IP--MLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIE 145 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l~-ip--~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVD 145 (250)
-+++++-++|++++..+.+.+. .+ ++-..+.. +.+.. ..+ | ..+.. ...|++|+|||
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-~t~~~----~~~-----------~---~~lp~-di~~r~VilvD 130 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRNE-ETLEP----VPY-----------F---QKLVS-NIDERMALIVD 130 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-TTCCE----EEE-----------E---EECCS-CGGGCEEEEEE
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-CCCce----EEE-----------e---cCCCC-ccCCCEEEEEC
Confidence 4789999999999999999875 22 22222211 11110 000 0 11112 25789999999
Q ss_pred ccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhc
Q psy1963 146 DVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQL 188 (250)
Q Consensus 146 DvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~ 188 (250)
|+++||+|+.++++.|++.|++.+.+++++... .+.+++.+.
T Consensus 131 d~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~p-~g~~~l~~~ 172 (208)
T 2ehj_A 131 PMLATGGSVIATIDLLKKAGCSSIKVLVLVAAP-EGIAALEKA 172 (208)
T ss_dssp EEESSCHHHHHHHHHHHHTTCCEEEEEEEEECH-HHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEEEEEEeCH-HHHHHHHHH
Confidence 999999999999999999999999999998887 456667543
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.64 E-value=6.5e-08 Score=80.65 Aligned_cols=101 Identities=10% Similarity=0.064 Sum_probs=68.5
Q ss_pred cEEEecCCCCHHHHHHHHHHcC-CCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEecc
Q psy1963 69 RTVCGVPYTALPIATAVSVKYN-IPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDV 147 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l~-ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDv 147 (250)
-+++++-++|++++..+.+.+. .++.++.-.+ ...+. ....+ | ..+.+ ...|++|+||||+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~r-d~~t~--~~~~~-----------~---~~lp~-di~~r~vilvDd~ 132 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYR-DPESL--NPVQY-----------Y---IKLPP-DIAERRAFLLDPM 132 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC------------CE-----------E---EECCS-CGGGSCEEEECSE
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEE-cCCCC--CceEE-----------e---ccCCC-ccCCCEEEEECCc
Confidence 4789999999999999998865 2232222211 00000 00000 0 11112 2478999999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhc
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQL 188 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~ 188 (250)
++||+|+.++++.|++.|++.+.+++++... .+.+++.+.
T Consensus 133 laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~-~g~~~l~~~ 172 (208)
T 1v9s_A 133 LATGGSASLALSLLKERGATGVKLMAILAAP-EGLERIAKD 172 (208)
T ss_dssp ESSSHHHHHHHHHHHHTTCCSCEEEEEEECH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEEEEEeCH-HHHHHHHHH
Confidence 9999999999999999999988888888876 566777653
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.56 E-value=2.4e-07 Score=78.90 Aligned_cols=98 Identities=9% Similarity=0.184 Sum_probs=67.9
Q ss_pred EEEecCCCCHHHHHHHHHHcC-CCE--EEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEec
Q psy1963 70 TVCGVPYTALPIATAVSVKYN-IPM--LIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIED 146 (250)
Q Consensus 70 ~Ivgv~~~Gi~~a~~lA~~l~-ip~--~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDD 146 (250)
+++++-++|++++..+.+.+. .++ +-..+. ...+.. ..+ | ..+.. ...|++|+||||
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd-~~t~~~----~~~-----------~---~~lp~-di~~r~VilvDd 164 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRD-ETTAEP----KLI-----------Y---EKLPA-DIRERWVMLLDP 164 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEEC-SSSCCE----EEE-----------E---EECCT-TGGGSEEEEECS
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEc-CCCCCe----EEE-----------e---ccCCc-ccCCCEEEEECC
Confidence 678999999999999999864 333 222221 111110 000 0 11111 247899999999
Q ss_pred cccccHHHHHHHHHHHhCCC--eEEEEEEEEeCCccHHHHHHhc
Q psy1963 147 VVTSGSSILETINDLKSVGI--VVTDVLTIVDREQGGRANLKQL 188 (250)
Q Consensus 147 vitTG~Tl~~a~~~L~~~Ga--~vv~~~vlvd~~~~~~~~l~~~ 188 (250)
+++||+|+.++++.|++.|+ +.+.+++++... .+.++|.+.
T Consensus 165 mlaTG~T~~~ai~~L~~~G~~p~~I~~~~lvaap-~g~~~l~~~ 207 (243)
T 1bd3_D 165 MCATAGSVCKAIEVLLRLGVKEERIIFVNILAAP-QGIERVFKE 207 (243)
T ss_dssp EESSCHHHHHHHHHHHHHTCCGGGEEEEEEEECH-HHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCCcceEEEEEEEeCH-HHHHHHHHH
Confidence 99999999999999999999 888888888776 466777653
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.43 E-value=8.4e-07 Score=74.32 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=70.0
Q ss_pred cEEEecCCCCHHHHHHHHHHcC-CCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEecc
Q psy1963 69 RTVCGVPYTALPIATAVSVKYN-IPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDV 147 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l~-ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDv 147 (250)
-+++++-++|.+++..+.+.+. .++..+--.+.+.. . ...| | ..+. ...|+.|+||||+
T Consensus 79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t-~---p~~~-----------~---~~lP--~i~~~~VilvD~~ 138 (217)
T 3dmp_A 79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDH-R---PVEY-----------L---VRLP--DLEDRIFILCDPM 138 (217)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCCCSS-S---CCCS-----------E---EECC--CCTTCEEEEECSE
T ss_pred EEEEEecccchHHHHHHHHhCcCCceeEEEEEECCCC-C---cEEE-----------e---ecCC--CCCCCEEEEEcCc
Confidence 3678999999999999999874 44322211110000 1 0000 0 1122 3578999999999
Q ss_pred ccccHHHHHHHHHHHhCCC--eEEEEEEEEeCCccHHHHHHhc--CCcEEE
Q psy1963 148 VTSGSSILETINDLKSVGI--VVTDVLTIVDREQGGRANLKQL--GYTLHS 194 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga--~vv~~~vlvd~~~~~~~~l~~~--g~~v~s 194 (250)
++||+|+.+|++.|++.|+ +.+.+++++... .+.+++.+. +++++.
T Consensus 139 laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~-egl~~l~~~~P~v~i~t 188 (217)
T 3dmp_A 139 VATGYSAAHAIDVLKRRGVPGERLMFLALVAAP-EGVQVFQDAHPDVKLYV 188 (217)
T ss_dssp ESSSHHHHHHHHHHHTTTCCGGGEEEECSEECH-HHHHHHHHHCTTCEEEE
T ss_pred ccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCH-HHHHHHHHHCCCCEEEE
Confidence 9999999999999999999 777777777765 456666542 344443
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.28 E-value=4.2e-06 Score=70.01 Aligned_cols=108 Identities=14% Similarity=0.210 Sum_probs=68.9
Q ss_pred cEEEecCCCCHHHHHHHHHHcC-CCE--E-EEeeccCCc-CccccccceeecCCcccccccccccceEeccccCCC--EE
Q psy1963 69 RTVCGVPYTALPIATAVSVKYN-IPM--L-IRRKDVKTY-GTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGD--KC 141 (250)
Q Consensus 69 d~Ivgv~~~Gi~~a~~lA~~l~-ip~--~-~~rk~~k~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk--~V 141 (250)
-+++++-++|.+++..+...+. .+. + +.|.+.... ......... .| ..+. ...++ +|
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~p~~-----------~y---~klP--~i~~~~~~V 136 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYI-----------YY---KKIP--DIRAKVDNV 136 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSCCCEEE-----------EE---EECC--CCCTTTCEE
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccccccccCceE-----------ee---ccCC--CccCCcceE
Confidence 4688999999999999999863 333 2 334321100 000000000 01 1111 24678 99
Q ss_pred EEEeccccccHHHHHHHHHHHhCCC-eEEEEEEEEeCCccHHHHHHhc--CCcEEE
Q psy1963 142 VIIEDVVTSGSSILETINDLKSVGI-VVTDVLTIVDREQGGRANLKQL--GYTLHS 194 (250)
Q Consensus 142 lIVDDvitTG~Tl~~a~~~L~~~Ga-~vv~~~vlvd~~~~~~~~l~~~--g~~v~s 194 (250)
+||||+++||+|+.+|++.|++ |+ +.+.+++++... .+.+++.+. +++++.
T Consensus 137 ilvDp~laTG~T~~~ai~~L~~-G~p~~I~~~~~vaa~-~gl~~l~~~~P~v~I~t 190 (216)
T 1xtt_A 137 IIADPMIATASTMLKVLEEVVK-ANPKRIYIVSIISSE-YGVNKILSKYPFIYLFT 190 (216)
T ss_dssp EEECSEESSSHHHHHHHHHHGG-GCCSEEEEECSEEEH-HHHHHHHHHCTTSEEEE
T ss_pred EEEcCCccchHHHHHHHHHHHh-CCCCeEEEEEEecCH-HHHHHHHHHCCCcEEEE
Confidence 9999999999999999999999 98 777777777655 456666542 444443
No 58
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=77.82 E-value=9.1 Score=27.19 Aligned_cols=61 Identities=20% Similarity=0.337 Sum_probs=43.1
Q ss_pred EEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHH----HHhcCCcEEEeecHHHHHHHHHH
Q psy1963 141 CVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRAN----LKQLGYTLHSLFTLSSVMDILYK 207 (250)
Q Consensus 141 VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~----l~~~g~~v~sl~~~~~l~~~~~~ 207 (250)
|++||| -.=...++..+++.||.+. .++.|..++-.+. .++.|+.+....+.+|+...+++
T Consensus 55 vvvvdd----kewaekairfvkslgaqvl--iiiydqdqnrleefsrevrrrgfevrtvtspddfkksler 119 (134)
T 2l69_A 55 VVVVDD----KEWAEKAIRFVKSLGAQVL--IIIYDQDQNRLEEFSREVRRRGFEVRTVTSPDDFKKSLER 119 (134)
T ss_dssp EEECSS----HHHHHHHHHHHHHHCCCCE--EEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHH
T ss_pred EEEEcc----HHHHHHHHHHHHhcCCeEE--EEEEeCchhHHHHHHHHHHhcCceEEEecChHHHHHHHHH
Confidence 555666 3456778899999999874 3455665544333 34689999999999988777654
No 59
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=63.01 E-value=12 Score=26.42 Aligned_cols=50 Identities=22% Similarity=0.378 Sum_probs=35.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHS 194 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~s 194 (250)
+.+++.|+++- .+|.....+++.|++.|-+++. + .+|...-.+.|+|+-+
T Consensus 53 l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~~----l---~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAVN----V---EGGMHAWGDEGLEIKS 102 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEEE----E---TTHHHHHCSSSCBCCC
T ss_pred hcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEEE----e---cChHHHHHHCCCccee
Confidence 45778888874 6788888899999999987531 2 3455544567888754
No 60
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=58.09 E-value=45 Score=28.13 Aligned_cols=75 Identities=15% Similarity=0.115 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccccHH---
Q psy1963 77 TALPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSGSS--- 153 (250)
Q Consensus 77 ~Gi~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG~T--- 153 (250)
+.-.+|..+|..||+|+.-..-.+=.-|+. + -.+... ..|+.|.||-.....=..
T Consensus 8 ~~~~la~~ia~~l~~~l~~~~~~~F~dGE~------~---------------v~i~~~-vrg~dv~iiqs~~~pn~~lme 65 (284)
T 1u9y_A 8 QSQNLAFKVAKLLNTKLTRVEYKRFPDNEI------Y---------------VRIVDE-INDDEAVIINTQKNQNDAIVE 65 (284)
T ss_dssp TCHHHHHHHHHHTTCCEECEEEEECTTCCE------E---------------EEECSC-CCSSEEEEECCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHhCCeeeeeEEEECCCCCE------E---------------EEeCCC-CCCCEEEEEeCCCCCcHHHHH
Confidence 345789999999999986544321112321 0 122223 479999999886542122
Q ss_pred HHHHHHHHHhCCCeEEEEEE
Q psy1963 154 ILETINDLKSVGIVVTDVLT 173 (250)
Q Consensus 154 l~~a~~~L~~~Ga~vv~~~v 173 (250)
+.-++.+++.+||+.+.+++
T Consensus 66 ll~~~~a~~~~~a~~i~~v~ 85 (284)
T 1u9y_A 66 TILLCDALRDEGVKKITLVA 85 (284)
T ss_dssp HHHHHHHHHTTTCCEEEEEC
T ss_pred HHHHHHHHHHcCCceEEEEe
Confidence 33357888999998765444
No 61
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=57.95 E-value=13 Score=25.33 Aligned_cols=37 Identities=19% Similarity=0.065 Sum_probs=32.3
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDV 171 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~ 171 (250)
+..|++++=|+..-..|.|..+++++|++.|-.+.-.
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~ 77 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT 77 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 4689999999999999999999999999888775443
No 62
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=57.60 E-value=57 Score=28.16 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=47.0
Q ss_pred CCCHHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEecccccc-HH-
Q psy1963 76 YTALPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTSG-SS- 153 (250)
Q Consensus 76 ~~Gi~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitTG-~T- 153 (250)
.+.-.+|..+|..||+|+.-..-.+=.-|+. + -.+.. -.+|+.|.||-.....- ..
T Consensus 14 ~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~------~---------------v~i~e-svrg~dV~iiqs~~~p~nd~l 71 (319)
T 3dah_A 14 NANPALAQEVVKILGIPLGKAMVSRFSDGEI------Q---------------VEIQE-NVRGKDVFVLQSTCAPTNDNL 71 (319)
T ss_dssp SSCHHHHHHHHHHHTSCCCCEEEEECTTSCE------E---------------EEECS-CCBTCEEEEECCCCSSHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEECCCCCE------E---------------EEECC-CcCCCeEEEEccCCCCCcHHH
Confidence 4455799999999999975433221112321 0 11222 24799999997765431 12
Q ss_pred --HHHHHHHHHhCCCeEEEEEEE
Q psy1963 154 --ILETINDLKSVGIVVTDVLTI 174 (250)
Q Consensus 154 --l~~a~~~L~~~Ga~vv~~~vl 174 (250)
+.-.+.+++.+||+.+.+++.
T Consensus 72 meLl~~idA~k~asA~rIt~ViP 94 (319)
T 3dah_A 72 MELMIMVDALKRASAGRITAAIP 94 (319)
T ss_dssp HHHHHHHHHHHHTTBSEEEEEES
T ss_pred HHHHHHHHHHHHcCCcEEEEEcc
Confidence 344678889999988765553
No 63
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=49.87 E-value=65 Score=27.90 Aligned_cols=76 Identities=8% Similarity=0.058 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccc-cHHHH
Q psy1963 77 TALPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTS-GSSIL 155 (250)
Q Consensus 77 ~Gi~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitT-G~Tl~ 155 (250)
+.-.+|..+|..||+|+.-..-.+=.-|+. + -.+.. -.+|+.|.||-..... -..+.
T Consensus 11 ~~~~La~~ia~~lg~~l~~~~~~~F~dGE~------~---------------v~i~e-svrg~dV~iiqs~~~p~nd~lm 68 (326)
T 3s5j_B 11 SHQDLSQKIADRLGLELGKVVTKKFSNQET------C---------------VEIGE-SVRGEDVYIVQSGCGEINDNLM 68 (326)
T ss_dssp SCCHHHHHHHHHTTCCCCCEEEEECTTSCE------E---------------EEECS-CCTTCEEEEECCCCSCHHHHHH
T ss_pred CCHHHHHHHHHHhCCceeeeEEeECCCCCE------E---------------EEECC-CcCCCcEEEEecCCCCccHHHH
Confidence 334799999999999975433221112322 0 12222 3579999999764332 12233
Q ss_pred ---HHHHHHHhCCCeEEEEEEE
Q psy1963 156 ---ETINDLKSVGIVVTDVLTI 174 (250)
Q Consensus 156 ---~a~~~L~~~Ga~vv~~~vl 174 (250)
-.+.+++.+||+.+.+++.
T Consensus 69 eLl~~idA~k~asA~rIt~ViP 90 (326)
T 3s5j_B 69 ELLIMINACKIASASRVTAVIP 90 (326)
T ss_dssp HHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHHhcCCcEEEEecc
Confidence 3577888999988766543
No 64
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=47.19 E-value=90 Score=24.98 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=32.5
Q ss_pred cccccHHHHHHHHHHHhCC--CeEEEEEEEEeCCc-cHHHHHHhcCCcEEEeec
Q psy1963 147 VVTSGSSILETINDLKSVG--IVVTDVLTIVDREQ-GGRANLKQLGYTLHSLFT 197 (250)
Q Consensus 147 vitTG~Tl~~a~~~L~~~G--a~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~~ 197 (250)
+.-||+-+.++++.+.+.+ +++ ++|+.++.. ...+..++.|+|++.+-.
T Consensus 10 ~sG~g~~~~~~l~~l~~~~l~~~I--~~Vit~~~~~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 10 ASGSGTNFQAIVDAAKRGDLPARV--ALLVCDRPGAKVIERAARENVPAFVFSP 61 (212)
T ss_dssp CCSSCHHHHHHHHHHHTTCCCEEE--EEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred EECCcHHHHHHHHHHHhCCCCCeE--EEEEeCCCCcHHHHHHHHcCCCEEEeCc
Confidence 3467888888999988773 344 344456543 445555689999987543
No 65
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=45.98 E-value=62 Score=26.14 Aligned_cols=47 Identities=19% Similarity=0.119 Sum_probs=31.2
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 150 SGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 150 TG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
+|+.+.+.++..++......-++|+.++.. ...+.-++.|+|++.+-
T Consensus 12 ~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~ 59 (211)
T 3p9x_A 12 SGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALD 59 (211)
T ss_dssp TCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECC
T ss_pred CchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeC
Confidence 688888889888765433223455557653 34555568999998764
No 66
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=45.12 E-value=88 Score=25.10 Aligned_cols=48 Identities=17% Similarity=0.139 Sum_probs=32.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 149 TSGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 149 tTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
-||+-+.++++.+.+.+....-++|+.++.. .+.+..++.|+|++.+-
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 5677888889999887653333445556543 45555678999998754
No 67
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=44.82 E-value=69 Score=25.93 Aligned_cols=68 Identities=12% Similarity=0.129 Sum_probs=42.6
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEeec--H--HHHHHHHHHc
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLFT--L--SSVMDILYKA 208 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~~--~--~~l~~~~~~~ 208 (250)
+||.|+ +.-+|+-+.+.++.+++.+...--++|+-++.. .+.+..++.|+|++.+-. + .++.+.+.+.
T Consensus 9 ~ri~vl--~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~ 81 (215)
T 3kcq_A 9 LRVGVL--ISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREH 81 (215)
T ss_dssp EEEEEE--ESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHT
T ss_pred CEEEEE--EECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHh
Confidence 455443 356788888889988765433333455556653 455666789999997632 2 4566666664
No 68
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=44.70 E-value=50 Score=24.40 Aligned_cols=53 Identities=21% Similarity=0.303 Sum_probs=38.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEee
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~ 196 (250)
+.+++.|+++++ +|.....++..|++.|...+. .+ .+|.....+.|.|+.+..
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~---~l---~GG~~~W~~~g~p~~~~~ 105 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS---EL---KGGLAAWKAIGGPTEGII 105 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE---EC---TTHHHHHHHTTCCEEEEC
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE---Ee---cCHHHHHHHCCCCcccCC
Confidence 346788999876 788888899999999986432 11 355555567899988865
No 69
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=44.43 E-value=15 Score=22.25 Aligned_cols=26 Identities=8% Similarity=0.285 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Q psy1963 198 LSSVMDILYKANKIKVDTVEDVKKYL 223 (250)
Q Consensus 198 ~~~l~~~~~~~~~i~~~~~~~v~~~l 223 (250)
...++..+.+.|.|++++.++|-+|-
T Consensus 20 ~~~~mR~AV~~G~iTQ~E~D~I~~yp 45 (51)
T 2xf7_A 20 SEELLRVAVNAGDLTQEEADKIMSYP 45 (51)
T ss_dssp CHHHHHHHHHHTSSCHHHHHHHHTSC
T ss_pred hHHHHHHHHhcCcccHHHHHHHHhCc
Confidence 45678888999999999999998764
No 70
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.30 E-value=71 Score=21.83 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=14.5
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
++|+||||=-.... .....|++.|..+
T Consensus 3 ~~ilivdd~~~~~~---~l~~~L~~~g~~v 29 (120)
T 3f6p_A 3 KKILVVDDEKPIAD---ILEFNLRKEGYEV 29 (120)
T ss_dssp CEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred CeEEEEECCHHHHH---HHHHHHHhCCEEE
Confidence 57888887544332 2334455556543
No 71
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=44.07 E-value=79 Score=25.43 Aligned_cols=55 Identities=22% Similarity=0.331 Sum_probs=37.3
Q ss_pred EEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 140 KCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 140 ~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
|+.|+ +--+|+-+.+.++.+++.+...--++|+.++.. .+.+.-++.|+|++.+-
T Consensus 9 ri~vl--~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~ 64 (209)
T 4ds3_A 9 RVVIF--ISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFK 64 (209)
T ss_dssp EEEEE--ESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred cEEEE--EECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeC
Confidence 55544 456788999999999776544333555666653 45566678999998764
No 72
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=43.51 E-value=69 Score=22.07 Aligned_cols=29 Identities=24% Similarity=0.213 Sum_probs=18.9
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 137 KGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 137 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
.+++|+||||=-..... ..+.|++.|..+
T Consensus 6 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSL---LDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhCCceE
Confidence 56789999986555333 345566677654
No 73
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=42.72 E-value=57 Score=22.58 Aligned_cols=51 Identities=22% Similarity=0.261 Sum_probs=36.1
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL 195 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl 195 (250)
.+++.|+++++ +|.....++..|++.|-..+.. + .+|.....+.|.++.+-
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~---l---~GG~~~W~~~g~~~~~~ 100 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE---L---KGGLAAWKAIGGPTELE 100 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEEE---C---TTHHHHHHHTTCCEEEC
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEEE---e---cCCHHHHHHCCCCCCCC
Confidence 46778999875 7888888999999999864221 1 35555556678877654
No 74
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=41.75 E-value=62 Score=26.21 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe
Q psy1963 149 TSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL 195 (250)
Q Consensus 149 tTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl 195 (250)
-+|+.+.+.++.+++ +...--++|+-++.-.+.+.-++.|+|++.+
T Consensus 21 G~gsnl~all~~~~~-~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~ 66 (215)
T 3da8_A 21 GTGSLLRSLLDAAVG-DYPARVVAVGVDRECRAAEIAAEASVPVFTV 66 (215)
T ss_dssp SCCHHHHHHHHHSST-TCSEEEEEEEESSCCHHHHHHHHTTCCEEEC
T ss_pred CChHHHHHHHHHHhc-cCCCeEEEEEeCCchHHHHHHHHcCCCEEEe
Confidence 468888888888754 3222224555566534555666899999988
No 75
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=41.27 E-value=66 Score=21.84 Aligned_cols=29 Identities=17% Similarity=0.389 Sum_probs=24.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
+.+++.|++.. .+|.....++..|++.|.
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 35678899987 688888899999999998
No 76
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=38.90 E-value=13 Score=31.00 Aligned_cols=46 Identities=24% Similarity=0.193 Sum_probs=32.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEee
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~ 196 (250)
+.||+|...+++.|.+...++.+ ++.-+....+.+.+.|+++.+|-
T Consensus 38 LGtGST~~~~i~~L~~~~~~i~~---~V~tS~~t~~~~~~~Gi~l~~l~ 83 (239)
T 3uw1_A 38 VGTGSTANCFIDALAAVKDRYRG---AVSSSVATTERLKSHGIRVFDLN 83 (239)
T ss_dssp ECCSHHHHHHHHHHHTTGGGSCE---EEESSHHHHHHHHHTTCCBCCGG
T ss_pred ECccHHHHHHHHHHHhhhccceE---EeCCcHHHHHHHHHcCCcEEecc
Confidence 47999999999999876433221 35555556677778999987654
No 77
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=38.65 E-value=26 Score=25.90 Aligned_cols=30 Identities=27% Similarity=0.292 Sum_probs=19.3
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
.++-|||||||--+.-. .....|++.|..+
T Consensus 10 ~k~~rILiVDD~~~~r~---~l~~~L~~~G~~~ 39 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRR---IVKNLLRDLGFNN 39 (134)
T ss_dssp CTTCCEEEECSCHHHHH---HHHHHHHHTTCCC
T ss_pred CCCCEEEEEeCCHHHHH---HHHHHHHHcCCcE
Confidence 35568999999665533 3345566777653
No 78
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=38.53 E-value=1.2e+02 Score=24.37 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=32.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 149 TSGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 149 tTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
-+|+.+.+.++.+++. ....-++|+.++.. .+.+.-++.|+|++.+-
T Consensus 14 G~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 14 GNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIP 61 (215)
T ss_dssp SCCHHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEECC
T ss_pred CCcHHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 4788899999988765 43333455556653 34556668999998863
No 79
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=38.49 E-value=69 Score=29.52 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=41.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHH-HhCCCeEEEEEEEEeCCccH-HHHHHhcCCcEEEeecHHHHHHHHHHc
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDL-KSVGIVVTDVLTIVDREQGG-RANLKQLGYTLHSLFTLSSVMDILYKA 208 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L-~~~Ga~vv~~~vlvd~~~~~-~~~l~~~g~~v~sl~~~~~l~~~~~~~ 208 (250)
....||+|.|. .-+......++.| ++.|.+++.+.......... .+.++..+..+...-+..++.+.+.+.
T Consensus 276 ~~l~GKrv~i~----gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~i~~D~~el~~~i~~~ 348 (525)
T 3aek_B 276 TYLTGKRVFIF----GDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALITDDYLEVEKAIEAA 348 (525)
T ss_dssp GGGTTCEEEEC----SSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCEECSCHHHHHHHHHHH
T ss_pred hhcCCCEEEEE----cCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEEEeCCHHHHHHHHhhc
Confidence 34689999975 4456677778888 79999986554422111111 222344454444444566676666653
No 80
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=38.03 E-value=54 Score=28.19 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=30.5
Q ss_pred CEEEEEeccccccHH------HHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe
Q psy1963 139 DKCVIIEDVVTSGSS------ILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL 195 (250)
Q Consensus 139 k~VlIVDDvitTG~T------l~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl 195 (250)
+|||| ++|+| ..+.++.|++.|.++..+ .+...-..+.+.+.|++++.+
T Consensus 3 ~~i~i-----~~GGTgGHi~palala~~L~~~g~~V~~v---g~~~g~e~~~v~~~g~~~~~i 57 (365)
T 3s2u_A 3 GNVLI-----MAGGTGGHVFPALACAREFQARGYAVHWL---GTPRGIENDLVPKAGLPLHLI 57 (365)
T ss_dssp CEEEE-----ECCSSHHHHHHHHHHHHHHHHTTCEEEEE---ECSSSTHHHHTGGGTCCEEEC
T ss_pred CcEEE-----EcCCCHHHHHHHHHHHHHHHhCCCEEEEE---ECCchHhhchhhhcCCcEEEE
Confidence 56765 46666 577889999999887532 222211133455678887765
No 81
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=37.58 E-value=47 Score=23.32 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=35.7
Q ss_pred ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeC
Q psy1963 133 GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDR 177 (250)
Q Consensus 133 g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~ 177 (250)
|.+..|+.++=|++.-..|.|-.+++++|++.-.....++.++..
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 346789999999999999999999999999975444445555543
No 82
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.13 E-value=98 Score=24.78 Aligned_cols=46 Identities=13% Similarity=0.246 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHHhC--CCeEEEEEEEEeCC-ccHHHHHHhcCCcEEEee
Q psy1963 149 TSGSSILETINDLKSV--GIVVTDVLTIVDRE-QGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 149 tTG~Tl~~a~~~L~~~--Ga~vv~~~vlvd~~-~~~~~~l~~~g~~v~sl~ 196 (250)
.+|+.+.+.++.+++. ++++ ++|+.++. ..+.+..++.|+|++.+-
T Consensus 9 G~Gs~L~aLi~~~~~~~~~~~I--~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 9 GTGSNLQALIDSTREPNSSAQI--DIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp SSCTTHHHHHHHHHSTTCSCEE--EEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred CCchHHHHHHHHHhcCCCCcEE--EEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 4677888888887765 3444 34444554 245666678999998654
No 83
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=36.04 E-value=33 Score=27.65 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=41.9
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCC--------ccHHHHHHhcCCcEEEeecH-HHHHHHHH-Hc
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDRE--------QGGRANLKQLGYTLHSLFTL-SSVMDILY-KA 208 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~--------~~~~~~l~~~g~~v~sl~~~-~~l~~~~~-~~ 208 (250)
++||+- -+||.|...+.+.+ .|.+++.+--..... ++.++.|++.|++++.=.+. +.+-..+. .+
T Consensus 45 k~iVVA---S~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~lsgveR~is~kf 119 (201)
T 1vp8_A 45 KHLVVA---SSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHILSGLERSISRKL 119 (201)
T ss_dssp CEEEEE---CSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTTTTTHHHHHHHT
T ss_pred CEEEEE---eCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccccchhHHHHHhc
Confidence 566664 58999999999977 565554333222221 23477888999999886663 33332222 34
Q ss_pred CCCC
Q psy1963 209 NKIK 212 (250)
Q Consensus 209 ~~i~ 212 (250)
|-++
T Consensus 120 GG~~ 123 (201)
T 1vp8_A 120 GGVS 123 (201)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5444
No 84
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=35.57 E-value=63 Score=22.27 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=14.6
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
++|+||||=-... ......|++.|..+
T Consensus 3 ~~ILivdd~~~~~---~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVLR---KIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHHH---HHHHHHHHHCCcEE
Confidence 5788888754332 23334455566543
No 85
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=35.34 E-value=57 Score=21.79 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=30.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
+..|+.++=|++.-.+|.|..++.+.+++.+..+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 6789999999999999999999999999987753
No 86
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=35.19 E-value=26 Score=28.77 Aligned_cols=45 Identities=27% Similarity=0.392 Sum_probs=31.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL 195 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl 195 (250)
+.||+|...+++.|.+...++. +.+.-+....+.+.+.|++++++
T Consensus 32 lgsGST~~~~i~~L~~~~~~it---v~VtnS~~~a~~l~~~gi~l~~l 76 (224)
T 3kwm_A 32 VGTGSTVGFLIEELVNYRDKIK---TVVSSSEDSTRKLKALGFDVVDL 76 (224)
T ss_dssp ECCSHHHHHHHHHGGGCTTTEE---EEEESCHHHHHHHHHTTCCBCCH
T ss_pred ECCcHHHHHHHHHHHhhcCceE---EEECCcHHHHHHHHHcCCeEEec
Confidence 4699999999999987643322 22455545566777889987664
No 87
>2o3i_A Hypothetical protein; NESG, CVR68, Q7NTB2, structural genomics, PSI-2, protein structure initiative; 2.30A {Chromobacterium violaceum} SCOP: e.73.1.1
Probab=35.02 E-value=44 Score=29.95 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhcCCCccEEEecCCCCHHH--HHHHHHHcCCCEEEE
Q psy1963 53 LSTIINDYLNINKISARTVCGVPYTALPI--ATAVSVKYNIPMLIR 96 (250)
Q Consensus 53 l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~--a~~lA~~l~ip~~~~ 96 (250)
..+.+.+.+...+.+++.|++++.||.+- +..+|-.+|+|++-.
T Consensus 86 A~~~le~~~~~~g~~~~avi~~EiGG~N~~~pl~~AA~~GlPvVDa 131 (405)
T 2o3i_A 86 AALAARQRLESQGRKLAYVVAPESGALGFVVASLVAAKLGLAVVDA 131 (405)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHTCEEESB
T ss_pred HHHHHHHHHHhcCCCccEEEeeccCccchHHHHHHHHHcCCCEEcc
Confidence 44444444333455799999999999874 445567899999854
No 88
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=34.99 E-value=78 Score=27.66 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHHHHHHHcCCCEEEE
Q psy1963 48 KLMDYLSTIINDYLNINKISARTVCGVPYTALPIATAVSVKYNIPMLIR 96 (250)
Q Consensus 48 ~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~~lA~~l~ip~~~~ 96 (250)
+....+...+.+.+.+. +||+|++.......++...|..+++|++..
T Consensus 77 ~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 77 KSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 33333444455555554 489988877555555567778899997654
No 89
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=34.58 E-value=1.2e+02 Score=25.47 Aligned_cols=50 Identities=20% Similarity=0.231 Sum_probs=33.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTL 192 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v 192 (250)
..+|++|||. -+|..=..++++++..|++++. +++.+...+.+++.|...
T Consensus 164 ~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~Vi~----~~~~~~~~~~~~~lGa~~ 213 (340)
T 3s2e_A 164 TRPGQWVVIS----GIGGLGHVAVQYARAMGLRVAA----VDIDDAKLNLARRLGAEV 213 (340)
T ss_dssp CCTTSEEEEE----CCSTTHHHHHHHHHHTTCEEEE----EESCHHHHHHHHHTTCSE
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHCCCeEEE----EeCCHHHHHHHHHcCCCE
Confidence 4689999885 2366667788999999996533 455544455566677653
No 90
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=34.09 E-value=40 Score=24.54 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=33.0
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEE
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLT 173 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~v 173 (250)
.+..|+.|+=|++.-..+.|..+++++|+..+...+...+
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v 114 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEE
Confidence 4578999999999999999999999999998766444333
No 91
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=34.06 E-value=42 Score=23.63 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=28.9
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCC
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVG 165 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G 165 (250)
+..|++|+=|++.-.++.|..+++++|+...
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 6789999999999999999999999999987
No 92
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=32.98 E-value=81 Score=27.82 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=43.7
Q ss_pred HHHHHH---HHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEecccc-ccHHH
Q psy1963 79 LPIATA---VSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVT-SGSSI 154 (250)
Q Consensus 79 i~~a~~---lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvit-TG~Tl 154 (250)
-.+|.. +|..||+|+.-+.-.+=.-|+. + -.+... ..|+.|.||-.... .-..+
T Consensus 39 ~~la~~~~~ia~~lg~~l~~~~~~~F~dGE~------~---------------v~i~es-vrg~dV~iiqs~~~~~nd~l 96 (379)
T 2ji4_A 39 SSCMELSKKIAERLGVEMGKVQVYQEPNRET------R---------------VQIQES-VRGKDVFIIQTVSKDVNTTI 96 (379)
T ss_dssp GGGGHHHHHHHHHHTCCCCCEEEEECTTSCE------E---------------EEECSC-CTTCEEEEECCCCSCHHHHH
T ss_pred HHHHHhHHHHHHHhCCceEeeEEEECCCCCE------E---------------EEeCCC-cCCCEEEEEeCCCCCccHHH
Confidence 457777 9999999975433221111221 0 122222 47999999988654 22333
Q ss_pred HH---HHHHHHhCCCeEEEEEE
Q psy1963 155 LE---TINDLKSVGIVVTDVLT 173 (250)
Q Consensus 155 ~~---a~~~L~~~Ga~vv~~~v 173 (250)
.+ ++.+++.++|+.+.+++
T Consensus 97 meLl~~idA~k~asA~rit~Vi 118 (379)
T 2ji4_A 97 MELLIMVYACKTSCAKSIIGVI 118 (379)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEEE
Confidence 33 46788899998766554
No 93
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=32.57 E-value=89 Score=21.62 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=29.9
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
+..|+.|+=|++.-.++.|..+++++++..+...
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 96 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGL 96 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 6789999999999999999999999999975543
No 94
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=32.05 E-value=64 Score=21.60 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=29.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
+..|+.++=|++.-.+|.|..++.++|+..+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 67899999999999999999999999999875
No 95
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=32.03 E-value=20 Score=29.55 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=31.3
Q ss_pred ccccHHHHHHHHHHHhC----CCeEEEEEEEEeCCccHHHHHHhcCCcEEEee
Q psy1963 148 VTSGSSILETINDLKSV----GIVVTDVLTIVDREQGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~----Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~ 196 (250)
+.||+|...+++.|.+. +.++. ++.-+....+.+.+.|++++++-
T Consensus 24 LGsGST~~~~i~~L~~~~~~~~~~i~----~VttS~~t~~~l~~~Gi~l~~l~ 72 (225)
T 3l7o_A 24 LGTGSTAYYFVEEVGRRVQEEGLQVI----GVTTSSRTTAQAQALGIPLKSID 72 (225)
T ss_dssp ECCSTTHHHHHHHHHHHHHHHCCCCE----EEESSHHHHHHHHHHTCCBCCGG
T ss_pred ECCcHHHHHHHHHHHHhhhhcCCCEE----EEcCCHHHHHHHhccCceEEecC
Confidence 46999999999998764 44332 24555455667777899987753
No 96
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=31.45 E-value=72 Score=22.45 Aligned_cols=28 Identities=29% Similarity=0.325 Sum_probs=15.4
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 137 KGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 137 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+.+||||||=-.... ...+.|++.|..
T Consensus 4 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAK---TIANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHHHH---HHHHHHHHcCCE
Confidence 3568888888654433 334445556654
No 97
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=31.43 E-value=1e+02 Score=26.03 Aligned_cols=72 Identities=10% Similarity=0.092 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccc-cHHH---
Q psy1963 79 LPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTS-GSSI--- 154 (250)
Q Consensus 79 i~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitT-G~Tl--- 154 (250)
-.+|..+|..||+|+.-..-.+=.-|+. + -.+.. . |+.|.||--.... -..+
T Consensus 10 ~~la~~ia~~lg~~l~~~~~~~F~dGE~------~---------------v~i~e--~-g~dV~iiqs~~~p~nd~lmeL 65 (286)
T 3lrt_A 10 LKLAARIAEELKTEPVMPDERRFPDGEL------Y---------------LRYDE--D-LTGHNIFIIGNTHSDAEVMEM 65 (286)
T ss_dssp HHHHHHHHHHTTSCEECCEEEECTTSCE------E---------------EECCS--C-CTTSEEEEECCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCeeeeEEEECCCCCE------E---------------EEEcC--C-CCcEEEEEeCCCCCcHHHHHH
Confidence 4689999999999986433221111221 0 11122 2 8889988755432 1223
Q ss_pred HHHHHHHHhCCCeEEEEEEE
Q psy1963 155 LETINDLKSVGIVVTDVLTI 174 (250)
Q Consensus 155 ~~a~~~L~~~Ga~vv~~~vl 174 (250)
.-.+.+++.+||+.+.+++.
T Consensus 66 l~~ida~k~~~A~~it~ViP 85 (286)
T 3lrt_A 66 ILTLSAIQDYRTKSVNIIAP 85 (286)
T ss_dssp HHHHHHGGGSCCSEEEEEES
T ss_pred HHHHHHHHHcCCCEEEEEec
Confidence 33577888899987655543
No 98
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=31.13 E-value=53 Score=20.22 Aligned_cols=46 Identities=9% Similarity=0.113 Sum_probs=33.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHHc
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYKA 208 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~~ 208 (250)
+....|+.++++.+++.+.. .+.+++.+ .+..+++..|+++.+...
T Consensus 5 v~~~~~~~~a~~~m~~~~~~---~~pV~d~~------------~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 5 VQPKDTVDRVAKILSRNKAG---SAVVMEGD------------EILGVVTERDILDKVVAK 50 (70)
T ss_dssp ECTTCBHHHHHHHHHHTTCS---EEEEEETT------------EEEEEEEHHHHHHHTTTT
T ss_pred ECCCCcHHHHHHHHHHcCCC---EEEEEECC------------EEEEEEEHHHHHHHHHHc
Confidence 35567899999999998743 34444532 577899999999887553
No 99
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=30.84 E-value=1.8e+02 Score=24.39 Aligned_cols=50 Identities=20% Similarity=0.159 Sum_probs=34.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
..+|++|+|. -.|..-..++++++..|+.++. .++..+.-.+.+++.|..
T Consensus 158 ~~~g~~VlV~----GaG~vG~~aiq~ak~~G~~~vi---~~~~~~~k~~~a~~lGa~ 207 (346)
T 4a2c_A 158 GCENKNVIII----GAGTIGLLAIQCAVALGAKSVT---AIDISSEKLALAKSFGAM 207 (346)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EEESCHHHHHHHHHTTCS
T ss_pred cCCCCEEEEE----CCCCcchHHHHHHHHcCCcEEE---EEechHHHHHHHHHcCCe
Confidence 3689999986 3477777889999999998643 345554434455566654
No 100
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=30.21 E-value=58 Score=24.46 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=37.4
Q ss_pred CEEEEEeccccccHHH---HHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeec-HHHHHHHH
Q psy1963 139 DKCVIIEDVVTSGSSI---LETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFT-LSSVMDIL 205 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl---~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~-~~~l~~~~ 205 (250)
+.|+|+=|...+.... ..+++.+++.|..+..+.+- +......+.+...+-.++.+-+ +.++.+.+
T Consensus 108 ~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg-~~~~~~L~~iA~~~~~~~~~~~~~~~L~~~~ 177 (185)
T 3n2n_F 108 SVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK-DFNETQLARIADSKDHVFPVNDGFQALQGII 177 (185)
T ss_dssp EEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS-SCCHHHHTTTSSSGGGEEEHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec-cCCHHHHHHHhCCCCCeEEeccHHHHHHHHH
Confidence 4688888888877654 67888899998766554442 2221222222223345555554 55554443
No 101
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=30.11 E-value=2.1e+02 Score=23.12 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=35.1
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
.||+++ +..||+-+.++++.+.+......-++|+.++.. .+.+..++.|+|++.+-
T Consensus 23 ~rI~~l--~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~ 79 (229)
T 3auf_A 23 IRIGVL--ISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMD 79 (229)
T ss_dssp EEEEEE--ESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECC
T ss_pred cEEEEE--EeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEEC
Confidence 366654 225688888899998876432222344556543 34555678999988654
No 102
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=29.42 E-value=1.4e+02 Score=23.94 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=30.9
Q ss_pred cccHHHHHHHHHHHhCC--CeEEEEEEEEeCCc-cHHHHHHhcCCcEEEee
Q psy1963 149 TSGSSILETINDLKSVG--IVVTDVLTIVDREQ-GGRANLKQLGYTLHSLF 196 (250)
Q Consensus 149 tTG~Tl~~a~~~L~~~G--a~vv~~~vlvd~~~-~~~~~l~~~g~~v~sl~ 196 (250)
.+|+.+.+.++.+++.. .++ ++|+.++.. .+.+..++.|+|++.+-
T Consensus 9 g~gsnl~ali~~~~~~~~~~~i--~~Vis~~~~~~~~~~A~~~gIp~~~~~ 57 (212)
T 1jkx_A 9 GNGSNLQAIIDACKTNKIKGTV--RAVFSNKADAFGLERARQAGIATHTLI 57 (212)
T ss_dssp SCCHHHHHHHHHHHTTSSSSEE--EEEEESCTTCHHHHHHHHTTCEEEECC
T ss_pred CCcHHHHHHHHHHHcCCCCceE--EEEEeCCCchHHHHHHHHcCCcEEEeC
Confidence 45678888888887763 444 444556543 45566678999998754
No 103
>1f2v_A COBH, precorrin-8X methylmutase; alpha-beta WIND, doubly wound sheet, isomerase; 2.10A {Pseudomonas denitrificans} SCOP: c.23.17.1 PDB: 1i1h_A*
Probab=29.34 E-value=1.3e+02 Score=24.60 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=27.6
Q ss_pred HHHHhhcCCCccEEEecCCC--CHHHHHHHHHHc--CCCEEEEeec
Q psy1963 58 NDYLNINKISARTVCGVPYT--ALPIATAVSVKY--NIPMLIRRKD 99 (250)
Q Consensus 58 a~~i~~~~~~~d~Ivgv~~~--Gi~~a~~lA~~l--~ip~~~~rk~ 99 (250)
.+.+.+....+..|+|+|.| |..-+...-... ++|++.++-+
T Consensus 155 leli~~g~~~PalVIG~PVGFVgaaESKe~L~~~~~~vP~I~~~Gr 200 (219)
T 1f2v_A 155 LEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGR 200 (219)
T ss_dssp HHHHHTTCCCCSEEEECCCSSSSHHHHHHHHHHCCTTCCEEEECTT
T ss_pred HHHHHcCCCCCCEEEEeCCCccCHHHHHHHHHhCCCCCCEEEEeCC
Confidence 34444434678999999998 444444333445 7999988764
No 104
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=29.13 E-value=79 Score=22.60 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
+..|+.|+=|++.-.+|.|..++.++++..|..+
T Consensus 72 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 105 (118)
T 3b76_A 72 IKTGDILLNVDGVELTEVSRSEAVALLKRTSSSI 105 (118)
T ss_dssp SCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 6789999999999999999999999999887653
No 105
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=29.07 E-value=85 Score=20.47 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=24.9
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
.+++.|+++.+ +|.....++..|++.|-+.+
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCE
Confidence 46788999875 68888888999999997643
No 106
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=28.82 E-value=2.1e+02 Score=24.36 Aligned_cols=49 Identities=20% Similarity=0.215 Sum_probs=34.0
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
+.+|++|||+ -+|..=..++++++..|++++. +++.+...+.+++.|..
T Consensus 187 ~~~g~~VlV~----G~G~vG~~a~qla~~~Ga~Vi~----~~~~~~~~~~~~~lGa~ 235 (363)
T 3uog_A 187 LRAGDRVVVQ----GTGGVALFGLQIAKATGAEVIV----TSSSREKLDRAFALGAD 235 (363)
T ss_dssp CCTTCEEEEE----SSBHHHHHHHHHHHHTTCEEEE----EESCHHHHHHHHHHTCS
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHcCCEEEE----EecCchhHHHHHHcCCC
Confidence 4689999987 2677777889999999997543 35554444555666764
No 107
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.71 E-value=88 Score=21.47 Aligned_cols=28 Identities=14% Similarity=0.181 Sum_probs=13.7
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 137 KGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 137 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+.+||||||=-.....+ .+.|++.|..
T Consensus 5 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAI---ERVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCccEEEEECCHHHHHHH---HHHHHHCCcE
Confidence 346778887754443333 3334445543
No 108
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=28.40 E-value=67 Score=20.63 Aligned_cols=45 Identities=9% Similarity=0.118 Sum_probs=32.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHH
Q psy1963 148 VTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYK 207 (250)
Q Consensus 148 itTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~ 207 (250)
++-..|+.+|++.+.+.+.. ++.++|.+ .+..+++-.|+...+..
T Consensus 5 v~p~~tv~ea~~~M~~~~i~---~~~V~d~~------------~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 5 VQPKDTVDRVAKILSRNKAG---SAVVMEGD------------EILGVVTERDILDKVVA 49 (70)
T ss_dssp ECTTCBHHHHHHHHHHTTCS---EEEEEETT------------EEEEEEEHHHHHHHTTT
T ss_pred ECCCCcHHHHHHHHHHcCCC---EEEEEECC------------EEEEEEEHHHHHHHHHh
Confidence 34567899999999999743 44455532 57799999998866543
No 109
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=27.88 E-value=1.7e+02 Score=25.15 Aligned_cols=51 Identities=18% Similarity=0.262 Sum_probs=35.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTL 192 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v 192 (250)
+.+|++|||+ -.|..=..++++++..|+..+ +.++..+.-.+.+++.|..+
T Consensus 183 ~~~g~~VlV~----GaG~vG~~aiqlAk~~Ga~~V---i~~~~~~~~~~~a~~lGa~~ 233 (398)
T 1kol_A 183 VGPGSTVYVA----GAGPVGLAAAASARLLGAAVV---IVGDLNPARLAHAKAQGFEI 233 (398)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEE---EEEESCHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEE----CCcHHHHHHHHHHHHCCCCeE---EEEcCCHHHHHHHHHcCCcE
Confidence 4689999885 247777788999999998532 33466654456667788863
No 110
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=27.00 E-value=86 Score=24.12 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=31.2
Q ss_pred ccccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 133 GVYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 133 g~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
|.+..|++|+=|++.-.+|.|...++++|+..|..+
T Consensus 128 G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v 163 (170)
T 3egg_C 128 GRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRV 163 (170)
T ss_dssp CCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEE
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 336789999999999999999999999999987543
No 111
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=26.99 E-value=1.5e+02 Score=20.92 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=12.8
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 137 KGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 137 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+.+|+||||--..... ..+.|++.|..
T Consensus 13 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~ 40 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMV---LQRLLEKAGHK 40 (143)
T ss_dssp --CEEEEECSSHHHHHH---HHHHHHC--CE
T ss_pred ccceEEEEeCCHHHHHH---HHHHHHHcCCe
Confidence 45678888885443322 23334445543
No 112
>2afr_A Cobalamin biosynthesis precorrin isomerase; 2.30A {Leptospira interrogans} PDB: 2afv_A*
Probab=26.49 E-value=1.3e+02 Score=24.70 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=31.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCC--CHHHHHHHHHHc------CCCEEEEeec
Q psy1963 44 ISYPKLMDYLSTIINDYLNINKISARTVCGVPYT--ALPIATAVSVKY------NIPMLIRRKD 99 (250)
Q Consensus 44 ~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~--Gi~~a~~lA~~l------~ip~~~~rk~ 99 (250)
.+-|-.+-.+.++ +.+....|..|+|+|.| |..=+...-... ++|++.++-+
T Consensus 140 GNAPTAL~~Llel----i~~g~~~PalVIG~PVGFVgAaESKe~L~~~~~~~~~~vP~I~~~Gr 199 (231)
T 2afr_A 140 GNAPTALLEIEKL----IRQEGIKPALIVGVPVGFVSAKESKESILKLEYYNVTSIPYILTMGR 199 (231)
T ss_dssp SSCHHHHHHHHHH----HHHHCCCCSEEEECCCCSSSHHHHHHHHHHHHHTTSCCCCEEEECSS
T ss_pred eCcHHHHHHHHHH----HHcCCCCCcEEEEeCCCcccHHHHHHHHHhcccccCCCCCEEEEeCC
Confidence 3456555544443 33334578999999997 444333322333 7999988864
No 113
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=26.13 E-value=2.7e+02 Score=23.67 Aligned_cols=48 Identities=15% Similarity=0.037 Sum_probs=33.4
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
.+|++|||. -.+|..=..++++++..|++++.+ . .. .-.+.+++.|..
T Consensus 163 ~~g~~VlV~---Ga~G~vG~~a~qla~~~Ga~Vi~~---~-~~-~~~~~~~~lGa~ 210 (371)
T 3gqv_A 163 SKPVYVLVY---GGSTATATVTMQMLRLSGYIPIAT---C-SP-HNFDLAKSRGAE 210 (371)
T ss_dssp SSCCEEEEE---STTSHHHHHHHHHHHHTTCEEEEE---E-CG-GGHHHHHHTTCS
T ss_pred CCCcEEEEE---CCCcHHHHHHHHHHHHCCCEEEEE---e-CH-HHHHHHHHcCCc
Confidence 578999886 355777788899999999986543 2 22 334556677865
No 114
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=26.12 E-value=1e+02 Score=21.97 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=30.5
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
.+..|+.|+=|++.-.++.|...++..++..|..
T Consensus 71 gL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 104 (120)
T 2iwo_A 71 KLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGS 104 (120)
T ss_dssp CCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3568999999999999999999999999999766
No 115
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=25.91 E-value=2e+02 Score=24.16 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=45.7
Q ss_pred CCCEEEEEecccc-ccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe--ecHHHHHHHHHHcCCCCH
Q psy1963 137 KGDKCVIIEDVVT-SGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL--FTLSSVMDILYKANKIKV 213 (250)
Q Consensus 137 ~Gk~VlIVDDvit-TG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl--~~~~~l~~~~~~~~~i~~ 213 (250)
.+.+|+|||++=. |.....+..+.|++-....+-+++ .+..+.-...+.... ..+.+ .+.+++.+++.+...+++
T Consensus 107 ~~~kvviIdead~l~~~a~naLLk~lEep~~~~~~Il~-t~~~~~l~~ti~SRc-~~~~~~~~~~~~~~~~L~~~~~~~~ 184 (334)
T 1a5t_A 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA-TREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREVTMSQ 184 (334)
T ss_dssp SSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEE-ESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHCCCCH
T ss_pred CCcEEEEECchhhcCHHHHHHHHHHhcCCCCCeEEEEE-eCChHhCcHHHhhcc-eeeeCCCCCHHHHHHHHHHhcCCCH
Confidence 5679999997643 234456667777765444433332 222222223333322 23333 346678888888777776
Q ss_pred HHHHHHHH
Q psy1963 214 DTVEDVKK 221 (250)
Q Consensus 214 ~~~~~v~~ 221 (250)
+..+.+..
T Consensus 185 ~~~~~l~~ 192 (334)
T 1a5t_A 185 DALLAALR 192 (334)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65554443
No 116
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=25.84 E-value=2.5e+02 Score=24.05 Aligned_cols=55 Identities=20% Similarity=0.177 Sum_probs=34.6
Q ss_pred CEEEEEeccccccHHHH-HHHHHHHhCCCeEEEEEEEEeCC---ccHHHHHHhcCCcEEEeecH
Q psy1963 139 DKCVIIEDVVTSGSSIL-ETINDLKSVGIVVTDVLTIVDRE---QGGRANLKQLGYTLHSLFTL 198 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~-~a~~~L~~~Ga~vv~~~vlvd~~---~~~~~~l~~~g~~v~sl~~~ 198 (250)
.||+++ .+..+. .+++.|.+.|.+++++++--|+. ....+.-.+.|+|++..-++
T Consensus 23 mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~ 81 (329)
T 2bw0_A 23 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRW 81 (329)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCC
T ss_pred CEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcc
Confidence 688888 233444 46888888887766555433442 22234445789999887653
No 117
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=25.74 E-value=88 Score=23.59 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=21.8
Q ss_pred EEEEEeccccccHHHHHHHHHHHh
Q psy1963 140 KCVIIEDVVTSGSSILETINDLKS 163 (250)
Q Consensus 140 ~VlIVDDvitTG~Tl~~a~~~L~~ 163 (250)
.+.+|||-..+-.++.++++.|++
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~ 59 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRA 59 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 488889999999999999999997
No 118
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=25.63 E-value=1.5e+02 Score=21.32 Aligned_cols=53 Identities=19% Similarity=0.293 Sum_probs=29.2
Q ss_pred CcccHHHHHHHHHHHHHCCceeeCCccccCccccCeEeecccccCCHHHHHHHHHHHHHH
Q psy1963 1 MSVSQEKLNHLCLQLFDIDALKFGDFVTKVGIKTPVYLDLRGIISYPKLMDYLSTIINDY 60 (250)
Q Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~~g~f~l~sG~~s~~y~d~~~~~~~p~~~~~l~~~la~~ 60 (250)
|..+.....+.++.|.+.|.+..-.-.-.+|+.+.+| |+++ +...+...+...
T Consensus 61 l~~s~~~V~~~l~~Le~kGlI~~~~~~~~~g~~~~~Y-dl~p------l~~kL~~~~~~~ 113 (128)
T 2vn2_A 61 MTVSAAECMEMVRRLLQKGMIAIEEHTDEQGIRNEKY-TLEP------LWEKLVHHLYTQ 113 (128)
T ss_dssp SSSCHHHHHHHHHHHHHTTSSEECC----------CE-ECHH------HHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHHHCCCEEEEeEECCCCcEEEEE-ehHH------HHHHHHHHHHHH
Confidence 3456677788999999999998865443568877765 7654 344555544433
No 119
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=25.61 E-value=1.4e+02 Score=22.91 Aligned_cols=67 Identities=7% Similarity=0.014 Sum_probs=38.8
Q ss_pred CEEEEEeccccccH---HHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHh--cCCcEEEeecHHHHHHHH
Q psy1963 139 DKCVIIEDVVTSGS---SILETINDLKSVGIVVTDVLTIVDREQGGRANLKQ--LGYTLHSLFTLSSVMDIL 205 (250)
Q Consensus 139 k~VlIVDDvitTG~---Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~--~g~~v~sl~~~~~l~~~~ 205 (250)
+.++|+=|.-.+.. .+.++++.+++.|..+..+.+=-+......+.+.. .+-.++.+-++.++.+.+
T Consensus 117 ~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~L~~~~ 188 (202)
T 1ijb_A 117 RIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSSVDELEQQR 188 (202)
T ss_dssp EEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHHHCTTCCCEEESSGGGHHHHH
T ss_pred eEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhCCCCcccEEEeCCHHHHHHHH
Confidence 34677777766643 67888899999887665443311112223333432 244566777777776554
No 120
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=25.35 E-value=1.7e+02 Score=20.19 Aligned_cols=27 Identities=19% Similarity=0.017 Sum_probs=13.2
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 138 GDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 138 Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
..+||||||=-..... ..+.|++.|..
T Consensus 6 ~~~iLivdd~~~~~~~---l~~~l~~~g~~ 32 (140)
T 3grc_A 6 RPRILICEDDPDIARL---LNLMLEKGGFD 32 (140)
T ss_dssp CSEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCCEEEEcCCHHHHHH---HHHHHHHCCCe
Confidence 3567777775443322 23334445544
No 121
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=25.07 E-value=86 Score=20.86 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=30.3
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
+..|+.|+=||+.-.++.+..++.+.|+..+..+.
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 81 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 81 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 57899999999999999888999999999776653
No 122
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=24.85 E-value=1.1e+02 Score=21.96 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=7.2
Q ss_pred CCEEEEEecccc
Q psy1963 138 GDKCVIIEDVVT 149 (250)
Q Consensus 138 Gk~VlIVDDvit 149 (250)
+.+||||||=-.
T Consensus 7 ~~~ILivdd~~~ 18 (154)
T 3gt7_A 7 AGEILIVEDSPT 18 (154)
T ss_dssp CCEEEEECSCHH
T ss_pred CCcEEEEeCCHH
Confidence 456777777433
No 123
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=24.76 E-value=2.7e+02 Score=23.19 Aligned_cols=49 Identities=29% Similarity=0.172 Sum_probs=29.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCC-CeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVG-IVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~G-a~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
..+|++|+|+ -.|+....+++.++.+| ++++. ++..+.-.+..++.|..
T Consensus 161 ~~~g~~VlV~----GaG~~g~~a~~~a~~~~g~~Vi~----~~~~~~r~~~~~~~Ga~ 210 (348)
T 4eez_A 161 VKPGDWQVIF----GAGGLGNLAIQYAKNVFGAKVIA----VDINQDKLNLAKKIGAD 210 (348)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTSCCEEEE----EESCHHHHHHHHHTTCS
T ss_pred CCCCCEEEEE----cCCCccHHHHHHHHHhCCCEEEE----EECcHHHhhhhhhcCCe
Confidence 3589999986 45666677788888775 45433 34543323344455554
No 124
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=24.61 E-value=1.1e+02 Score=21.70 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=34.2
Q ss_pred HHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEe--ecHHHHHHHHHH
Q psy1963 156 ETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSL--FTLSSVMDILYK 207 (250)
Q Consensus 156 ~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl--~~~~~l~~~~~~ 207 (250)
..++.|.+.|+.++-+. .-++++.+.|.+.|+.++.- -++++.++.+.+
T Consensus 54 ~~~~~L~~~gv~~vi~~---~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~ 104 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY---GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIG 104 (121)
T ss_dssp HHHHHHHHTTCCEEECS---BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEC---CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHc
Confidence 67888888888765443 34667888999999998863 245555555543
No 125
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=24.29 E-value=2.9e+02 Score=22.42 Aligned_cols=68 Identities=13% Similarity=0.020 Sum_probs=40.7
Q ss_pred CEEEEEeccccc-cHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcC-----CcEEEeecHHHHHHHHH
Q psy1963 139 DKCVIIEDVVTS-GSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLG-----YTLHSLFTLSSVMDILY 206 (250)
Q Consensus 139 k~VlIVDDvitT-G~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g-----~~v~sl~~~~~l~~~~~ 206 (250)
+.|||+=|...+ +..+..+++.+++.|..+..+.+--+......+.+.... -.++..-+++++.+...
T Consensus 130 ~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~~~~~~g~~~~~~~~~~~~L~~~~~ 203 (281)
T 4hqf_A 130 QLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSAWENVKNVIG 203 (281)
T ss_dssp EEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTTSCSSSSCCTTEEEECGGGHHHHHH
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhCCCCCCCCCceEEecchhhhhcccC
Confidence 347777777665 447888899999999776554442222222223332221 36777778877766554
No 126
>3e7d_A COBH, precorrin-8X methylmutase; ssgcid, decode, braba00006A, structural genomics, seattle ST genomics center for infectious disease; 1.80A {Brucella abortus} SCOP: c.23.17.1
Probab=24.03 E-value=1.8e+02 Score=23.50 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=32.3
Q ss_pred ccCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHH--HH-HHHH-HcCCCEEEEeec
Q psy1963 43 IISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPI--AT-AVSV-KYNIPMLIRRKD 99 (250)
Q Consensus 43 ~~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~--a~-~lA~-~l~ip~~~~rk~ 99 (250)
+.+-|-.+-.+. +.+.+....+..|+|+|.|=+.. +. .+.. ..++|++.++-+
T Consensus 137 IGNAPTAL~~Ll----eli~~g~~~PalVIG~PVGFV~aaESKe~L~~~~~~vP~I~~~Gr 193 (212)
T 3e7d_A 137 IGNAPTALFRLF----ELLDAGAPKPALIIGMPVGFVGAAESKDELAANSRGVPYVIVRGR 193 (212)
T ss_dssp ESSCHHHHHHHH----HHHHTTCCCCSEEEECCCSSSSHHHHHHHHHHCCTTCCEEEECSS
T ss_pred EECcHHHHHHHH----HHHHcCCCCcceEEEeCCCccChHHHHHHHHhcCCCCCEEEEecC
Confidence 344566554443 33444335789999999983333 33 3333 268999988864
No 127
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=23.99 E-value=1.3e+02 Score=20.27 Aligned_cols=48 Identities=21% Similarity=0.352 Sum_probs=32.1
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTL 192 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v 192 (250)
+.+++.|+++. .+|.....+...|++.|.++ . .+ .+|...-.+.|.|+
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~~v---~-~l---~GG~~~W~~~g~p~ 100 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGIDA---V-NV---EGGMHAWGDEGLEI 100 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEE---E-EE---TTHHHHHCSSSCBC
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCCCe---E-Ee---CCCHHHHHHCCCcC
Confidence 35778899987 57877888899999999832 2 22 24444444556664
No 128
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=23.86 E-value=3.3e+02 Score=23.05 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHcCCCEEEEeeccCCcCccccccceeecCCcccccccccccceEeccccCCCEEEEEeccccc-cHHH
Q psy1963 76 YTALPIATAVSVKYNIPMLIRRKDVKTYGTKKLIEGVYEKGDKRKDVKTYGTKKLIEGVYEKGDKCVIIEDVVTS-GSSI 154 (250)
Q Consensus 76 ~~Gi~~a~~lA~~l~ip~~~~rk~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~Gk~VlIVDDvitT-G~Tl 154 (250)
.+.-.+|..+|..||+|+.-..-.+=.-|+. + -.+... ..|+.|.||-..... -..+
T Consensus 16 ~~~~~la~~ia~~lg~~l~~~~~~~F~dGE~------~---------------v~i~e~-vrg~dv~iiqs~~~~~nd~l 73 (317)
T 1dku_A 16 NSNPELAKEIADIVGVQLGKCSVTRFSDGEV------Q---------------INIEES-IRGCDCYIIQSTSDPVNEHI 73 (317)
T ss_dssp SSCHHHHHHHHHHHTCCCCCEEEEECTTSCE------E---------------EEECSC-CTTCEEEEECCCCSSHHHHH
T ss_pred CCCHHHHHHHHHHhCCeeEeeEEEECCCCCE------E---------------EEecCC-CCCCEEEEEcCCCCCCcHHH
Confidence 4456799999999999985433321111221 0 122223 479999999875432 1223
Q ss_pred H---HHHHHHHhCCCeEEEEEEE
Q psy1963 155 L---ETINDLKSVGIVVTDVLTI 174 (250)
Q Consensus 155 ~---~a~~~L~~~Ga~vv~~~vl 174 (250)
. -.+..++.++++.+.++..
T Consensus 74 mell~~~~a~~~~~a~~i~av~p 96 (317)
T 1dku_A 74 MELLIMVDALKRASAKTINIVIP 96 (317)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHhhccCcceEEEEEE
Confidence 3 3466778888876655443
No 129
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=23.83 E-value=1.1e+02 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=22.5
Q ss_pred cCCCEEEEEeccccccHHH---HHHHHHHHhCCCeEEEEEEEEeCC
Q psy1963 136 EKGDKCVIIEDVVTSGSSI---LETINDLKSVGIVVTDVLTIVDRE 178 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl---~~a~~~L~~~Ga~vv~~~vlvd~~ 178 (250)
.+||.+|| ||++- .++++.|.+.|++|+ ++++.
T Consensus 9 f~GK~alV------TGas~GIG~aia~~la~~Ga~Vv----~~~~~ 44 (242)
T 4b79_A 9 YAGQQVLV------TGGSSGIGAAIAMQFAELGAEVV----ALGLD 44 (242)
T ss_dssp TTTCEEEE------ETTTSHHHHHHHHHHHHTTCEEE----EEESS
T ss_pred CCCCEEEE------eCCCCHHHHHHHHHHHHCCCEEE----EEeCC
Confidence 47988776 44442 456788889999874 44665
No 130
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=23.66 E-value=4e+02 Score=23.91 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=37.1
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhc-------------CCCccEEEecCCCCH-HHHHHHHHHcCCCEEEEe
Q psy1963 41 RGIISYPKLMDYLSTIINDYLNIN-------------KISARTVCGVPYTAL-PIATAVSVKYNIPMLIRR 97 (250)
Q Consensus 41 ~~~~~~p~~~~~l~~~la~~i~~~-------------~~~~d~Ivgv~~~Gi-~~a~~lA~~l~ip~~~~r 97 (250)
..+.++....+.+...+....... ....-++.|++-.|= .+|..+|..+|.+++.+.
T Consensus 39 ~dliG~~~~~~~L~~~l~~~~~~~~~~~~~~g~~~~~~~~~lLL~GppGtGKTtla~~la~~l~~~~i~in 109 (516)
T 1sxj_A 39 QQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQN 109 (516)
T ss_dssp GGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhcCCHHHHHHHHHHHHHhHhhchhhccccCccCCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 346778887777776665432111 012346678877675 578899999998877653
No 131
>1ou0_A Precorrin-8X methylmutase related protein; structural genomics, PSI, protein structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: c.23.17.1
Probab=23.66 E-value=94 Score=25.13 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=31.8
Q ss_pred cCCHHHHHHHHHHHHHHHhhcCCCccEEEecCCCCHHHHH--HHHHHcCCCEEEEeec
Q psy1963 44 ISYPKLMDYLSTIINDYLNINKISARTVCGVPYTALPIAT--AVSVKYNIPMLIRRKD 99 (250)
Q Consensus 44 ~~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~Gi~~a~--~lA~~l~ip~~~~rk~ 99 (250)
.+-|-.+-.+.++ +.+....|..|+|+|.|=+..+. ..-...++|++.++-+
T Consensus 135 GNAPTAL~~Llel----i~~g~~~PalVIG~PVGFVgaaESK~~L~~~~vP~I~~~Gr 188 (207)
T 1ou0_A 135 GNAPTALLEAMRM----IEENGWYDIPIVGIPVGFINASKAKEGLVSSHIEYISVEGH 188 (207)
T ss_dssp SSCHHHHHHHHHH----HHHHTCTTCCEEECCCCSHHHHHHHHHHHHSSSCEEEESSS
T ss_pred eCcHHHHHHHHHH----HHcCCCCCcEEEEeCCCccCHHHHHHHHhcCCCCEEEEeCC
Confidence 3456555544443 33333568999999998444332 2224469999988764
No 132
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=23.59 E-value=65 Score=26.63 Aligned_cols=51 Identities=22% Similarity=0.353 Sum_probs=27.4
Q ss_pred cCCCEEEEEeccccccHHH---HHHHHHHHhCCCeEEEEEEEEeCCcc----HHHHHHhcCCcEEEee
Q psy1963 136 EKGDKCVIIEDVVTSGSSI---LETINDLKSVGIVVTDVLTIVDREQG----GRANLKQLGYTLHSLF 196 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl---~~a~~~L~~~Ga~vv~~~vlvd~~~~----~~~~l~~~g~~v~sl~ 196 (250)
++||.+|| ||++- .++++.|-+.|++| ++.++.+. ..+.+++.|.+++.+.
T Consensus 7 L~gKvalV------TGas~GIG~aia~~la~~Ga~V----vi~~~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 7 LTGKTALV------TGSARGLGFAYAEGLAAAGARV----ILNDIRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp CTTCEEEE------TTCSSHHHHHHHHHHHHTTCEE----EECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCCCEEEE------eCCCcHHHHHHHHHHHHCCCEE----EEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 46766655 33332 44566777778775 34466532 2234445566665543
No 133
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=23.46 E-value=1.6e+02 Score=22.67 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=34.9
Q ss_pred EeecHHHHHHHHHHcC-----CCCHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCC
Q psy1963 194 SLFTLSSVMDILYKAN-----KIKVDTVEDVKKYLCNNQVLPKCDNDVQGRITRCLRPFT 248 (250)
Q Consensus 194 sl~~~~~l~~~~~~~~-----~i~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (250)
+++.=+.-.+|+.+.| .+++...+..++|..+..+..--.++++.-.+.| -||+
T Consensus 102 vlLvG~GA~~fA~~~G~~~~~l~t~~~~~~~~~~~~~~~qpn~~~nv~p~~~~~c-gpy~ 160 (162)
T 1apy_A 102 TLLVGESATTFAQSMGFINEDLSTSASQALHSDWLARNCQPNYWRNVIPDPSKYC-GPYK 160 (162)
T ss_dssp SEEEHHHHHHHHHHTTCCCCCCCCHHHHHHHHHHHHTTSCSCCBCSCBSCTTTCC-SCCB
T ss_pred eEEEcHHHHHHHHHcCCCccccCCHHHHHHHHHHHHhccCCCccccCCCCCCCCC-CCCC
Confidence 3444444445555443 5777778888888887655554457777788888 4665
No 134
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=23.45 E-value=1.9e+02 Score=20.23 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=27.1
Q ss_pred cCCCEEEEEecccc-ccHHHHHHHHHHHhCCCeEEEEEEE
Q psy1963 136 EKGDKCVIIEDVVT-SGSSILETINDLKSVGIVVTDVLTI 174 (250)
Q Consensus 136 ~~Gk~VlIVDDvit-TG~Tl~~a~~~L~~~Ga~vv~~~vl 174 (250)
.+|+++.++-=--. .|.++....+.|++.|+++++.+.+
T Consensus 78 l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~~~~~~ 117 (137)
T 2fz5_A 78 LKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIGTAIV 117 (137)
T ss_dssp CSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEcCcEEE
Confidence 46777776652222 3678888889999999998854443
No 135
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=23.32 E-value=1.2e+02 Score=19.93 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=29.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
+..|+.++=||+.-.++.+..++.+.+++.+..+
T Consensus 45 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 45 LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 5789999999999999988999999999886554
No 136
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=23.25 E-value=1.2e+02 Score=21.41 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=29.4
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCe
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIV 167 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~ 167 (250)
+..|+.|+=|++.-.++.|..++.+.+++.|-.
T Consensus 73 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 105 (117)
T 2byg_A 73 LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEV 105 (117)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 678999999999999999999999999987644
No 137
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=23.20 E-value=1.1e+02 Score=21.03 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=30.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
.+..|+.|+=|++.-.++.|..++.+.+++.+..+
T Consensus 53 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v 87 (103)
T 2dc2_A 53 GLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 87 (103)
T ss_dssp CCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 35689999999999999999999999999987654
No 138
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.13 E-value=1.8e+02 Score=20.47 Aligned_cols=15 Identities=13% Similarity=0.022 Sum_probs=10.0
Q ss_pred cCCCEEEEEeccccc
Q psy1963 136 EKGDKCVIIEDVVTS 150 (250)
Q Consensus 136 ~~Gk~VlIVDDvitT 150 (250)
..+.+||||||--..
T Consensus 13 ~~~~~iLivdd~~~~ 27 (152)
T 3eul_A 13 PEKVRVVVGDDHPLF 27 (152)
T ss_dssp -CCEEEEEECSSHHH
T ss_pred CceEEEEEEcCCHHH
Confidence 356789999985443
No 139
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=22.95 E-value=73 Score=26.64 Aligned_cols=50 Identities=30% Similarity=0.265 Sum_probs=33.7
Q ss_pred CEEEEEeccccccHHHHHHHHHHHhC---CCeEEEEEEEEeCCccHHHHHHhcCCcEEEee
Q psy1963 139 DKCVIIEDVVTSGSSILETINDLKSV---GIVVTDVLTIVDREQGGRANLKQLGYTLHSLF 196 (250)
Q Consensus 139 k~VlIVDDvitTG~Tl~~a~~~L~~~---Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~ 196 (250)
..+|-+ .||+|...+++.|.+. |.++. ++.-+....+.+.+.|++++++-
T Consensus 42 g~vIgL----GsGST~~~~i~~L~~~~~~gl~It----vVttS~~ta~~l~~~GI~l~~l~ 94 (255)
T 3hhe_A 42 DMRLGI----GSGSTVNEFIPLLGERVANGLRVT----CVATSQYSEQLCHKFGVPISTLE 94 (255)
T ss_dssp TEEEEE----CCSHHHHHHHHHHHHHHHTTCCEE----EEESSHHHHHHHHHTTCCBCCTT
T ss_pred CCEEEE----CCcHHHHHHHHHHHHhhccCCcEE----EEcCCHHHHHHHHHcCCcEEecc
Confidence 345544 6999999999998653 43322 34555455667778899987763
No 140
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=22.64 E-value=1.3e+02 Score=21.61 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.9
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 138 GDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 138 Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
..+||||||=-.. .....+.|++.|..++
T Consensus 36 ~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 36 PFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp ECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred ceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 3589999996544 3444555667776653
No 141
>3pty_A Arabinosyltransferase C; beta-sandwich, carbohydrate binding, carbohydrate; HET: AFO; 2.00A {Mycobacterium tuberculosis}
Probab=22.61 E-value=19 Score=32.18 Aligned_cols=11 Identities=36% Similarity=0.703 Sum_probs=9.4
Q ss_pred cccccccCCCC
Q psy1963 239 RITRCLRPFTN 249 (250)
Q Consensus 239 ~~~~~~~~~~~ 249 (250)
..-+|||||.|
T Consensus 271 l~FPCQrP~~~ 281 (406)
T 3pty_A 271 LAFPCQRPFGH 281 (406)
T ss_dssp TTCTTSEECCC
T ss_pred hcCCcCCcchh
Confidence 56799999987
No 142
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=22.42 E-value=2.2e+02 Score=24.02 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=34.1
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCC-eEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGI-VVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga-~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
+.+|++|||+ -.|..=..++++++..|+ +++. ++..+...+.+++.|..
T Consensus 164 ~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~~Vi~----~~~~~~~~~~~~~lGa~ 213 (352)
T 3fpc_A 164 IKLGDTVCVI----GIGPVGLMSVAGANHLGAGRIFA----VGSRKHCCDIALEYGAT 213 (352)
T ss_dssp CCTTCCEEEE----CCSHHHHHHHHHHHTTTCSSEEE----ECCCHHHHHHHHHHTCC
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHcCCcEEEE----ECCCHHHHHHHHHhCCc
Confidence 4689999987 247777778999999998 4533 45654445556677765
No 143
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.38 E-value=1.9e+02 Score=19.56 Aligned_cols=12 Identities=25% Similarity=0.534 Sum_probs=7.0
Q ss_pred CEEEEEeccccc
Q psy1963 139 DKCVIIEDVVTS 150 (250)
Q Consensus 139 k~VlIVDDvitT 150 (250)
.+||||||=-..
T Consensus 4 ~~ilivdd~~~~ 15 (127)
T 3i42_A 4 QQALIVEDYQAA 15 (127)
T ss_dssp EEEEEECSCHHH
T ss_pred ceEEEEcCCHHH
Confidence 467777764443
No 144
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=22.35 E-value=1.9e+02 Score=26.26 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=44.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHH-HhCCCeEEEEEEEEeCCcc-HHHHHHhcCCcEEEeecHHHHHHHHHHc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDL-KSVGIVVTDVLTIVDREQG-GRANLKQLGYTLHSLFTLSSVMDILYKA 208 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L-~~~Ga~vv~~~vlvd~~~~-~~~~l~~~g~~v~sl~~~~~l~~~~~~~ 208 (250)
...||+|+|. ..+......++.| ++.|.+++.+......... -++.+++.+..+..--+..++.+.+.+.
T Consensus 300 ~l~Gkrv~i~----gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~~~~D~~el~~~i~~~ 371 (511)
T 2xdq_B 300 NLTGKKAVVF----GDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVLITDDHTVVGDAIARV 371 (511)
T ss_dssp TTTTCEEEEE----ECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEEECCCHHHHHHHHHHH
T ss_pred hccCCEEEEE----cCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEEEeCCHHHHHHHHHhc
Confidence 4689999987 3455677788889 8999999765554333221 2334555554444444666777777654
No 145
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=22.32 E-value=3e+02 Score=22.58 Aligned_cols=51 Identities=16% Similarity=0.243 Sum_probs=35.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLH 193 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~ 193 (250)
...|++|+|| -.|..=.++++.++..|+++ .+.++.....+.+.+.|....
T Consensus 152 ~l~g~~v~Ii----G~G~iG~~~a~~l~~~G~~V----~~~dr~~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 152 TIHGANVAVL----GLGRVGMSVARKFAALGAKV----KVGARESDLLARIAEMGMEPF 202 (293)
T ss_dssp CSTTCEEEEE----CCSHHHHHHHHHHHHTTCEE----EEEESSHHHHHHHHHTTSEEE
T ss_pred CCCCCEEEEE----eeCHHHHHHHHHHHhCCCEE----EEEECCHHHHHHHHHCCCeec
Confidence 3589999986 57998899999999999854 345776433334445666543
No 146
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=22.29 E-value=2.6e+02 Score=23.22 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=34.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHH-HhcCCc
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANL-KQLGYT 191 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l-~~~g~~ 191 (250)
.+.+|++|||. -.+|..=..++++++..|++++. +++.+...+.+ ++.|..
T Consensus 146 ~~~~g~~vlI~---Ga~g~iG~~~~~~a~~~Ga~Vi~----~~~~~~~~~~~~~~~g~~ 197 (336)
T 4b7c_A 146 QPKNGETVVIS---GAAGAVGSVAGQIARLKGCRVVG----IAGGAEKCRFLVEELGFD 197 (336)
T ss_dssp CCCTTCEEEES---STTSHHHHHHHHHHHHTTCEEEE----EESSHHHHHHHHHTTCCS
T ss_pred CCCCCCEEEEE---CCCCHHHHHHHHHHHHCCCEEEE----EeCCHHHHHHHHHHcCCC
Confidence 34689998875 34466667788999999996533 35654445555 567765
No 147
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=22.10 E-value=1.5e+02 Score=24.04 Aligned_cols=58 Identities=16% Similarity=0.262 Sum_probs=33.5
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHhC-CCeEEEEEEEEeCCc--cHHHHHHhcCCcEEEe
Q psy1963 137 KGDKCVIIEDVVTSGSSILETINDLKSV-GIVVTDVLTIVDREQ--GGRANLKQLGYTLHSL 195 (250)
Q Consensus 137 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~-Ga~vv~~~vlvd~~~--~~~~~l~~~g~~v~sl 195 (250)
.++.++|||=-.+ -....+.++.+++. |..+..++.-+.... ++...|++.|+++++-
T Consensus 82 ~~~~~ilIDtg~~-~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~~~~v~~~ 142 (270)
T 4eyb_A 82 DGGRVLVVDTAWT-DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYAN 142 (270)
T ss_dssp ETTEEEEESCCSS-HHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEE
T ss_pred ECCEEEEEeCCCC-HHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHCCCeEEEC
Confidence 4567888874432 22344556666654 555544443333322 5677788889988764
No 148
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=21.98 E-value=2.6e+02 Score=23.49 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=32.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
+.+|++|||+ -.|..=..++++++..|++++. +++.+...+.+++.|..
T Consensus 174 ~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~Vi~----~~~~~~~~~~~~~lGa~ 222 (348)
T 3two_A 174 VTKGTKVGVA----GFGGLGSMAVKYAVAMGAEVSV----FARNEHKKQDALSMGVK 222 (348)
T ss_dssp CCTTCEEEEE----SCSHHHHHHHHHHHHTTCEEEE----ECSSSTTHHHHHHTTCS
T ss_pred CCCCCEEEEE----CCcHHHHHHHHHHHHCCCeEEE----EeCCHHHHHHHHhcCCC
Confidence 4689999986 2377777889999999996433 34443334455556654
No 149
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=21.94 E-value=2.2e+02 Score=24.34 Aligned_cols=66 Identities=17% Similarity=0.182 Sum_probs=39.3
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHHHH
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDILYK 207 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~~~ 207 (250)
+.+|++|||. -.|..=..++++++..|+..+ +.++..+...+.+++.|....--.+-.++.+.+.+
T Consensus 180 ~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~V---i~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 180 IKAGSTVAIL----GGGVIGLLTVQLARLAGATTV---ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAG 245 (370)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEE---EEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEE---EEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence 4689999986 237777788999999999432 23355544445555667653322222334444443
No 150
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=21.72 E-value=1.2e+02 Score=23.19 Aligned_cols=41 Identities=17% Similarity=-0.039 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhcCCCccEEEecCC-CCHHHHHHHHHHcCCCEEE
Q psy1963 51 DYLSTIINDYLNINKISARTVCGVPY-TALPIATAVSVKYNIPMLI 95 (250)
Q Consensus 51 ~~l~~~la~~i~~~~~~~d~Ivgv~~-~Gi~~a~~lA~~l~ip~~~ 95 (250)
+..++.+++.+. ++|+|+...+ .|-.++..+|.+|+.|++-
T Consensus 57 e~~a~~l~~~~~----~p~~Vl~g~t~~g~~vaprlAa~L~~~~~s 98 (166)
T 3fet_A 57 DAVSEGILKIAG----NYDYIAIGSTEVGREIAGYLSFKTGFYTAT 98 (166)
T ss_dssp HHHHHHHHHHHT----TCSEEEEECSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHc----CCCEEEEcCCCccccHHHHHHHHhCCCcee
Confidence 456667777665 4787765554 5778999999999999854
No 151
>1v9c_A Precorrin-8X methyl mutase; alpha-beta WIND, doubly wound sheet, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.20A {Thermus thermophilus} SCOP: c.23.17.1
Probab=21.68 E-value=1.5e+02 Score=24.17 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=21.3
Q ss_pred CCCccEEEecCCC--CHHHHHHHHHHcCCCEEEEeec
Q psy1963 65 KISARTVCGVPYT--ALPIATAVSVKYNIPMLIRRKD 99 (250)
Q Consensus 65 ~~~~d~Ivgv~~~--Gi~~a~~lA~~l~ip~~~~rk~ 99 (250)
+..|..|+|+|.| |..-+...-...++|++.++-+
T Consensus 150 ~~~PalVIG~PVGFVgaaESKe~L~~~~vP~I~~~Gr 186 (218)
T 1v9c_A 150 GARPALVLGMPVGFVNVLEAKRALMEAPVPWIVTEGR 186 (218)
T ss_dssp TCCCSEEEECCCSSSSHHHHHHHHTTSSSCEEEECTT
T ss_pred CCCCcEEEEeCCCccCHHHHHHHHHhCCCCEEEEeCC
Confidence 3467888888887 4333333223457888777654
No 152
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=21.46 E-value=1.2e+02 Score=19.68 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=30.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
.+..|+.++=||+.-.++.+..++...+++.|..+
T Consensus 46 gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 80 (87)
T 4e34_A 46 GLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 80 (87)
T ss_dssp CCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35689999999999999999999999999887654
No 153
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=21.42 E-value=2.6e+02 Score=23.59 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=33.9
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTL 192 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v 192 (250)
+.+|++|||. -.+|..=..++++++..|++++ .+++.+...+.+++.|...
T Consensus 165 ~~~g~~VlV~---Gg~g~iG~~~~~~a~~~Ga~Vi----~~~~~~~~~~~~~~lGa~~ 215 (353)
T 4dup_A 165 LTEGESVLIH---GGTSGIGTTAIQLARAFGAEVY----ATAGSTGKCEACERLGAKR 215 (353)
T ss_dssp CCTTCEEEES---STTSHHHHHHHHHHHHTTCEEE----EEESSHHHHHHHHHHTCSE
T ss_pred CCCCCEEEEE---cCCCHHHHHHHHHHHHcCCEEE----EEeCCHHHHHHHHhcCCCE
Confidence 4578888763 2567777888999999999743 3455544445555666653
No 154
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=21.26 E-value=1e+02 Score=21.80 Aligned_cols=50 Identities=12% Similarity=0.041 Sum_probs=33.7
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEee---cHHHHHHHHHH
Q psy1963 155 LETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLF---TLSSVMDILYK 207 (250)
Q Consensus 155 ~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~---~~~~l~~~~~~ 207 (250)
....+.|.+.|+.++-+. .-++++.+.|.+.|+.++.-. ++++.++.+.+
T Consensus 57 ~~~~~~l~~~gv~~vi~~---~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~ 109 (120)
T 2wfb_A 57 INAAQVLAKSGAGVLLTG---YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLD 109 (120)
T ss_dssp HHHHHHHHHHTEEEEECS---CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEC---CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHc
Confidence 346677777776554333 335677889999999998753 56676666654
No 155
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=21.18 E-value=1.1e+02 Score=21.02 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=23.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
.+++.|+++. .+|.....++..|++.|.
T Consensus 53 ~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp CTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 4677899887 688888889999999998
No 156
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=21.12 E-value=2.7e+02 Score=23.61 Aligned_cols=50 Identities=24% Similarity=0.190 Sum_probs=32.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
+.+|++|||+ .+|..=..++++++..|+..+ +.+++.+...+.+++.|..
T Consensus 188 ~~~g~~VlV~----GaG~vG~~a~qlak~~Ga~~V---i~~~~~~~~~~~a~~lGa~ 237 (371)
T 1f8f_A 188 VTPASSFVTW----GAGAVGLSALLAAKVCGASII---IAVDIVESRLELAKQLGAT 237 (371)
T ss_dssp CCTTCEEEEE----SCSHHHHHHHHHHHHHTCSEE---EEEESCHHHHHHHHHHTCS
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeE---EEECCCHHHHHHHHHcCCC
Confidence 4689999998 247666778888898998532 2235554444455566654
No 157
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=21.04 E-value=1.6e+02 Score=21.31 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
+..|++|+=|++.-.++.+..++++.+++.|-.+.
T Consensus 83 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~ 117 (132)
T 3l4f_D 83 LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLM 117 (132)
T ss_dssp CCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 57899999999999999999999999999876543
No 158
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=20.91 E-value=3.7e+02 Score=22.46 Aligned_cols=63 Identities=14% Similarity=0.197 Sum_probs=38.0
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecHHHHHHHH
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTLSSVMDIL 205 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~~~l~~~~ 205 (250)
+.+|++|||.- .+|..=..++++++..|++++. +++.+...+.+++.|.....-.+ .++.+.+
T Consensus 157 ~~~g~~VlV~G---asg~iG~~~~~~a~~~Ga~Vi~----~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v 219 (342)
T 4eye_A 157 LRAGETVLVLG---AAGGIGTAAIQIAKGMGAKVIA----VVNRTAATEFVKSVGADIVLPLE-EGWAKAV 219 (342)
T ss_dssp CCTTCEEEESS---TTSHHHHHHHHHHHHTTCEEEE----EESSGGGHHHHHHHTCSEEEESS-TTHHHHH
T ss_pred CCCCCEEEEEC---CCCHHHHHHHHHHHHcCCEEEE----EeCCHHHHHHHHhcCCcEEecCc-hhHHHHH
Confidence 45789988752 3566667788999999996533 34543444555666765433233 4444433
No 159
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=20.90 E-value=15 Score=30.28 Aligned_cols=48 Identities=17% Similarity=0.267 Sum_probs=33.6
Q ss_pred cccccHHHHHHHHHHHh----CCCeEEEEEEEEeCCccHHHHHHhcCCcEEEeecH
Q psy1963 147 VVTSGSSILETINDLKS----VGIVVTDVLTIVDREQGGRANLKQLGYTLHSLFTL 198 (250)
Q Consensus 147 vitTG~Tl~~a~~~L~~----~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~~~ 198 (250)
-+-||+|+..+++.|-+ .|..+.+ +..+....+.+++.|+++.+|-..
T Consensus 26 GlGTGSTv~~~i~~L~~~~~~~~l~i~~----V~tS~~t~~~a~~~Gi~l~~l~~~ 77 (228)
T 4gmk_A 26 GLGTGSTVKYMVDALGKRVNEEGLDIVG----VTTSIRTAEQAKSLGIVIKDIDEV 77 (228)
T ss_dssp EECCSHHHHHHHHHHHHHHHHHCCCCEE----EESSHHHHHHHHHTTCCBCCGGGS
T ss_pred EECchHHHHHHHHHHHHHHhhcCCcEEE----EeCcHHHHHHHHHcCCceeChHHC
Confidence 46899999999988754 3554322 455555666777899998776553
No 160
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.86 E-value=1.3e+02 Score=25.24 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=27.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEEEEE
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVTDVL 172 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv~~~ 172 (250)
.+|++|||| -.|.+....++.|.++|++++.+.
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGGTCEEEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhCCCEEEEEc
Confidence 589999976 788999999999999999865443
No 161
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=20.69 E-value=2.9e+02 Score=23.83 Aligned_cols=49 Identities=29% Similarity=0.367 Sum_probs=33.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCC-eEEEEEEEEeCCccHHHHHHhcCCc
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGI-VVTDVLTIVDREQGGRANLKQLGYT 191 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga-~vv~~~vlvd~~~~~~~~l~~~g~~ 191 (250)
+.+|++|||+ -.|..=..++++++..|+ .++ .++..+.-.+.+++.|..
T Consensus 211 ~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi----~~~~~~~~~~~~~~lGa~ 260 (404)
T 3ip1_A 211 IRPGDNVVIL----GGGPIGLAAVAILKHAGASKVI----LSEPSEVRRNLAKELGAD 260 (404)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEE----EECSCHHHHHHHHHHTCS
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEE----EECCCHHHHHHHHHcCCC
Confidence 4689999986 237777788999999999 443 245554445555667765
No 162
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.63 E-value=1.1e+02 Score=25.33 Aligned_cols=61 Identities=13% Similarity=0.050 Sum_probs=37.4
Q ss_pred CccccCeEeeccccc-CCHHHHHHHHHHHHHHHhhcCCCccEEEecCCC----CHHHHHHHHHHcCCCEEE
Q psy1963 30 VGIKTPVYLDLRGII-SYPKLMDYLSTIINDYLNINKISARTVCGVPYT----ALPIATAVSVKYNIPMLI 95 (250)
Q Consensus 30 sG~~s~~y~d~~~~~-~~p~~~~~l~~~la~~i~~~~~~~d~Ivgv~~~----Gi~~a~~lA~~l~ip~~~ 95 (250)
-|-..-+.++-..+- .++. ..+..|++.+.+. ++|+|++.... |-.++..+|..||+|++-
T Consensus 79 ~GaD~vi~v~d~~~~~~~~~---~~a~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 79 KGADRAVRVWDDAAEGSDAI---VVGRILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp TTCSEEEEECCGGGTTCCHH---HHHHHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred cCCCEEEEEcCcccccCCHH---HHHHHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 344444555543322 2333 3556666666654 37887766553 456899999999999763
No 163
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=20.45 E-value=2.4e+02 Score=20.60 Aligned_cols=47 Identities=6% Similarity=0.043 Sum_probs=31.2
Q ss_pred HHHHHHHhCCCeEEEEEEEEeCCccHHHHHHhcCCcEEEee--cHHHHHHHHH
Q psy1963 156 ETINDLKSVGIVVTDVLTIVDREQGGRANLKQLGYTLHSLF--TLSSVMDILY 206 (250)
Q Consensus 156 ~a~~~L~~~Ga~vv~~~vlvd~~~~~~~~l~~~g~~v~sl~--~~~~l~~~~~ 206 (250)
...+.|.+.|+.++-+. .-++++.+.|++ |+.++.-. ++++.++.+.
T Consensus 70 ~~~~~L~~~gv~~VI~g---~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~ 118 (136)
T 2re2_A 70 FMLKSALDHGANALVLS---EIGSPGFNFIKN-KMDVYIVPEMPVADALKLIL 118 (136)
T ss_dssp HHHHHHHHTTCSEEEES---CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEC---CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHH
Confidence 67788888887654332 335677889999 99998753 3444444443
No 164
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=20.42 E-value=1.1e+02 Score=20.42 Aligned_cols=45 Identities=13% Similarity=0.274 Sum_probs=30.8
Q ss_pred EEEEeccccccHHHHHHHHHHHh----CCCeEEEEEEEEeCCccHHHHH
Q psy1963 141 CVIIEDVVTSGSSILETINDLKS----VGIVVTDVLTIVDREQGGRANL 185 (250)
Q Consensus 141 VlIVDDvitTG~Tl~~a~~~L~~----~Ga~vv~~~vlvd~~~~~~~~l 185 (250)
-+=+|=-++||.-+..+.+-|.+ +|+..+.+.+-.+..+.+.+.|
T Consensus 18 eieidirvstgkeleralqelekalaragarnvqitisaendeqakell 66 (96)
T 2jvf_A 18 EIEIDIRVSTGKELERALQELEKALARAGARNVQITISAENDEQAKELL 66 (96)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHH
T ss_pred EEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEEEEecChHHHHHHH
Confidence 45567778999998888766555 6998877666555545555443
No 165
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.34 E-value=1.1e+02 Score=24.72 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=25.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHhCCCeEE
Q psy1963 136 EKGDKCVIIEDVVTSGSSILETINDLKSVGIVVT 169 (250)
Q Consensus 136 ~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~vv 169 (250)
..|++|||| -.|......++.|.++|+.+.
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 689999987 678888889999999999864
No 166
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=20.32 E-value=1.5e+02 Score=19.57 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=29.1
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCC
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGI 166 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga 166 (250)
+..|+.++=||..-.+|.|..++.+.|++...
T Consensus 44 L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 44 LHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 57899999999999999999999999999854
No 167
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.17 E-value=1.4e+02 Score=20.44 Aligned_cols=34 Identities=9% Similarity=0.107 Sum_probs=29.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHhCCCeE
Q psy1963 135 YEKGDKCVIIEDVVTSGSSILETINDLKSVGIVV 168 (250)
Q Consensus 135 ~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~v 168 (250)
+..|+.|+=|++.-.++.+...+++.++..|-.+
T Consensus 60 L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v 93 (107)
T 1uhp_A 60 LQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPI 93 (107)
T ss_dssp CCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 5789999999999999999999999999877544
No 168
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.15 E-value=1.4e+02 Score=21.00 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHhC
Q psy1963 134 VYEKGDKCVIIEDVVTSGSSILETINDLKSV 164 (250)
Q Consensus 134 ~~~~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 164 (250)
.+..|++|+=||+.-.++.|..++.+.|++.
T Consensus 61 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 61 GVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp SSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 3578999999999999999999999988875
No 169
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=20.05 E-value=1.5e+02 Score=21.12 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=28.4
Q ss_pred cCCCEEEEEeccccc-cHHHHHHHHHHHhCCCeEEEEEEEE
Q psy1963 136 EKGDKCVIIEDVVTS-GSSILETINDLKSVGIVVTDVLTIV 175 (250)
Q Consensus 136 ~~Gk~VlIVDDvitT-G~Tl~~a~~~L~~~Ga~vv~~~vlv 175 (250)
.+|+++.++-=--.+ |.++....+.|++.|+++++-.+.+
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~~~ 117 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIV 117 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCEEE
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCceEE
Confidence 578887777532222 6788999999999999988643333
Done!