Query psy1968
Match_columns 215
No_of_seqs 86 out of 104
Neff 3.6
Searched_HMMs 13730
Date Fri Aug 16 20:51:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1968.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1968hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f4ma1 d.3.1.4 (A:164-450) Pe 49.1 2.8 0.0002 35.1 1.4 90 101-211 58-155 (287)
2 d2bsza1 d.3.1.5 (A:6-275) Aryl 46.1 3.3 0.00024 33.4 1.3 20 193-212 62-81 (270)
3 d1w5ra1 d.3.1.5 (A:3-275) Aryl 43.0 3.9 0.00029 32.8 1.4 20 193-212 62-81 (273)
4 d1w4ta1 d.3.1.5 (A:1-277) Aryl 36.7 5.7 0.00041 31.9 1.4 43 169-212 39-86 (277)
5 d1e2ta_ d.3.1.5 (A:) Arylamine 35.9 5.9 0.00043 31.9 1.4 21 192-212 63-83 (274)
6 d1ofcx1 a.4.1.3 (X:799-850) SA 33.1 6.8 0.0005 25.3 1.0 24 96-121 28-51 (52)
7 d3dbya2 a.29.13.1 (A:126-260) 31.6 8.6 0.00062 28.6 1.6 23 100-122 26-48 (135)
8 d1jhfa1 a.4.5.2 (A:2-72) LexA 24.9 30 0.0022 22.3 3.3 20 99-118 2-21 (71)
9 d3d19a2 a.29.13.1 (A:145-274) 23.8 14 0.0011 26.9 1.6 23 100-122 29-51 (130)
10 d3dbya1 a.29.13.1 (A:5-125) Un 22.9 15 0.0011 26.7 1.6 24 100-123 28-51 (121)
11 d3d19a1 a.29.13.1 (A:11-144) U 21.6 17 0.0012 26.8 1.6 23 100-122 35-57 (134)
No 1
>d2f4ma1 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.15 E-value=2.8 Score=35.08 Aligned_cols=90 Identities=16% Similarity=0.229 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCCccee-cCcccCCcceeee-eeeccCC------CCccccChhhHHHHhhccccc
Q psy1968 101 TDKEKLLIWYCENFRRQYSSRYPLRRPLVMA-LENECGVQKMVCT-SINVTRF------PLVEFKSWSGCASFVSDHIVY 172 (215)
Q Consensus 101 S~KE~llL~yAenF~rQF~~lyPdRRpL~L~-p~NECGV~KFVCT-TIRPT~L------py~ELy~~~~cA~FVSd~L~Y 172 (215)
++.+.++++...=|.++|=+.. .. |..-||-+....- ...||.- .=-|+|--..|...+
T Consensus 58 ~~~d~ll~eLL~wFk~~fF~wv-------~~ppC~~C~~~~~~~~~~~~p~~~e~~~ga~rVE~~~C~~C~~~~------ 124 (287)
T d2f4ma1 58 SDEDFLLLELLHWFKEEFFRWV-------NNIVCSKCGGETRSRDEALLPNDDELKWGAKNVENHYCDACQLSN------ 124 (287)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEC-------SSCCCTTTCCCCEECSSCBCCCSHHHHTTCCCEEEEEETTTTEEE------
T ss_pred ChHhHHHHHHHHHHhhcCceec-------CCCCCcccCCccccccCCCCCChhhhccCCceEEEEEcCCCCCce------
Confidence 3456777888888888865421 11 4456775433221 1123211 112344333343332
Q ss_pred ccCCCCCCCCccccChhhHhhcccCCcchhhHHHHHhhh
Q psy1968 173 EPLDHPTNLPVRLRSPSTVFNGQSGHCFELSTLLVSLLL 211 (215)
Q Consensus 173 EpLe~P~~~P~~l~SPtt~L~~QkGnCFD~S~LLCSLLl 211 (215)
.+|. ..+|..+|..++|.|-|+|+++.++|-
T Consensus 125 -------rfpR-y~~p~~ll~tr~G~C~e~a~~~~~~~R 155 (287)
T d2f4ma1 125 -------RFPR-YNNPEKLLETRCGRCGEWANCFTLCCR 155 (287)
T ss_dssp -------EEEC-CCCHHHHHHHCEESHHHHHHHHHHHHH
T ss_pred -------eCCC-CCCHHHHHHhcCccHHHHHHHHHHHHH
Confidence 2342 358999999999999999999998873
No 2
>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]}
Probab=46.12 E-value=3.3 Score=33.36 Aligned_cols=20 Identities=35% Similarity=0.688 Sum_probs=17.6
Q ss_pred hcccCCcchhhHHHHHhhhh
Q psy1968 193 NGQSGHCFELSTLLVSLLLV 212 (215)
Q Consensus 193 ~~QkGnCFD~S~LLCSLLlG 212 (215)
+.+-|-||+++.|++++|-+
T Consensus 62 ~~rGG~C~E~N~lf~~lL~~ 81 (270)
T d2bsza1 62 GGRGGYCFEHNLLFMHALKA 81 (270)
T ss_dssp SCCCBCHHHHHHHHHHHHHH
T ss_pred cCCcccchhhhHHHHHHHHH
Confidence 46889999999999999954
No 3
>d1w5ra1 d.3.1.5 (A:3-275) Arylamine N-acetyltransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=43.03 E-value=3.9 Score=32.85 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=17.6
Q ss_pred hcccCCcchhhHHHHHhhhh
Q psy1968 193 NGQSGHCFELSTLLVSLLLV 212 (215)
Q Consensus 193 ~~QkGnCFD~S~LLCSLLlG 212 (215)
+++-|-||+++.|++++|-+
T Consensus 62 ~~rGGyC~E~N~lf~~~L~~ 81 (273)
T d1w5ra1 62 RRRGGYQYEHNGLLGYVLEE 81 (273)
T ss_dssp TCCCBCHHHHHHHHHHHHHH
T ss_pred cCCcccchhhhHHHHHHHHH
Confidence 57789999999999999953
No 4
>d1w4ta1 d.3.1.5 (A:1-277) Arylamine N-acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.66 E-value=5.7 Score=31.86 Aligned_cols=43 Identities=33% Similarity=0.644 Sum_probs=28.0
Q ss_pred ccccccCCCCCCCCccccChhhH-----hhcccCCcchhhHHHHHhhhh
Q psy1968 169 HIVYEPLDHPTNLPVRLRSPSTV-----FNGQSGHCFELSTLLVSLLLV 212 (215)
Q Consensus 169 ~L~YEpLe~P~~~P~~l~SPtt~-----L~~QkGnCFD~S~LLCSLLlG 212 (215)
.+.||=|+.-.+-|-.| +|..+ .+++-|-||+++.|++.+|-+
T Consensus 39 ~iPfENL~~~~g~~i~l-d~~~l~~kiV~~~rGGyC~E~N~Lf~~lL~~ 86 (277)
T d1w4ta1 39 RVAFENLDVLLDRPIEI-DADKVFAKVVEGSRGGYCFELNSLFARLLLA 86 (277)
T ss_dssp HSCEECHHHHTTCCCCC-SHHHHHHHHTTTTCCBCHHHHHHHHHHHHHH
T ss_pred cCCcCCcchhcCCCCCC-CHHHHHHHHHhcCCCccchhhhHHHHHHHHH
Confidence 56666553333333222 45544 357889999999999999953
No 5
>d1e2ta_ d.3.1.5 (A:) Arylamine N-acetyltransferase {Salmonella typhimurium [TaxId: 90371]}
Probab=35.91 E-value=5.9 Score=31.94 Aligned_cols=21 Identities=33% Similarity=0.597 Sum_probs=18.1
Q ss_pred hhcccCCcchhhHHHHHhhhh
Q psy1968 192 FNGQSGHCFELSTLLVSLLLV 212 (215)
Q Consensus 192 L~~QkGnCFD~S~LLCSLLlG 212 (215)
...+-|-||++..|++.+|-.
T Consensus 63 ~~~rGGyC~ElN~lf~~lL~~ 83 (274)
T d1e2ta_ 63 YARRGGYCFELNGLFERALRD 83 (274)
T ss_dssp TTCCCBCHHHHHHHHHHHHHH
T ss_pred hcCCCccchhhHHHHHHHHHH
Confidence 367889999999999999953
No 6
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=33.13 E-value=6.8 Score=25.26 Aligned_cols=24 Identities=21% Similarity=0.198 Sum_probs=18.2
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHh
Q psy1968 96 TYLRNTDKEKLLIWYCENFRRQYSSR 121 (215)
Q Consensus 96 SY~~nS~KE~llL~yAenF~rQF~~l 121 (215)
+....|+.| +-.|++-||+.|.++
T Consensus 28 e~~~Kt~eE--V~~Y~~vFw~ry~ei 51 (52)
T d1ofcx1 28 DVEGKTPEE--VIEYNAVFWERCTEL 51 (52)
T ss_dssp SSTTCCHHH--HHHHHHHHHHHGGGC
T ss_pred HhcCCCHHH--HHHHHHHHHHHHHhh
Confidence 344456666 899999999999764
No 7
>d3dbya2 a.29.13.1 (A:126-260) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=31.65 E-value=8.6 Score=28.59 Aligned_cols=23 Identities=26% Similarity=0.245 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC
Q psy1968 100 NTDKEKLLIWYCENFRRQYSSRY 122 (215)
Q Consensus 100 nS~KE~llL~yAenF~rQF~~ly 122 (215)
-+++|+.+.+-|++|.++|.+++
T Consensus 26 Ldp~E~~li~~A~~F~~~Fe~Ll 48 (135)
T d3dbya2 26 LDLVEKRLKEKSEEFTKHFEQFY 48 (135)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999975
No 8
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=24.88 E-value=30 Score=22.32 Aligned_cols=20 Identities=10% Similarity=-0.016 Sum_probs=18.1
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy1968 99 RNTDKEKLLIWYCENFRRQY 118 (215)
Q Consensus 99 ~nS~KE~llL~yAenF~rQF 118 (215)
..|+|++.+|.|..+|+.+.
T Consensus 2 ~LT~rQ~~vL~~I~~~~~~~ 21 (71)
T d1jhfa1 2 ALTARQQEVFDLIRDHISQT 21 (71)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 46899999999999999986
No 9
>d3d19a2 a.29.13.1 (A:145-274) Uncharacterized protein BCE_G9241_1042 {Bacillus cereus [TaxId: 1396]}
Probab=23.79 E-value=14 Score=26.91 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC
Q psy1968 100 NTDKEKLLIWYCENFRRQYSSRY 122 (215)
Q Consensus 100 nS~KE~llL~yAenF~rQF~~ly 122 (215)
-+++|+.++.-|++|.++|.+++
T Consensus 29 L~p~E~~li~~A~~f~~~Fe~Ll 51 (130)
T d3d19a2 29 LDPSERKLVDTARNFSNDFDELM 51 (130)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999876
No 10
>d3dbya1 a.29.13.1 (A:5-125) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=22.93 E-value=15 Score=26.71 Aligned_cols=24 Identities=21% Similarity=0.104 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC
Q psy1968 100 NTDKEKLLIWYCENFRRQYSSRYP 123 (215)
Q Consensus 100 nS~KE~llL~yAenF~rQF~~lyP 123 (215)
-+++|+.++.-|++|.++|.+++-
T Consensus 28 L~p~e~~li~~A~~F~~~Fd~Ll~ 51 (121)
T d3dbya1 28 LAPKEKEDIKKATYFVETFTNLLN 51 (121)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999763
No 11
>d3d19a1 a.29.13.1 (A:11-144) Uncharacterized protein BCE_G9241_1042 {Bacillus cereus [TaxId: 1396]}
Probab=21.62 E-value=17 Score=26.79 Aligned_cols=23 Identities=17% Similarity=0.108 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC
Q psy1968 100 NTDKEKLLIWYCENFRRQYSSRY 122 (215)
Q Consensus 100 nS~KE~llL~yAenF~rQF~~ly 122 (215)
-+++|+.+..-|++|.++|.+++
T Consensus 35 l~p~E~~li~~A~~F~~~Fd~Ll 57 (134)
T d3d19a1 35 FRCEDTQLIEEANQFYRLFEHIE 57 (134)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999875
Done!