RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1969
(256 letters)
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double
layers of alpha helices on TOP and bottom, hydrolase;
HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP:
c.117.1.1 PDB: 1m21_A*
Length = 503
Score = 45.3 bits (108), Expect = 1e-05
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQ 140
L+ PT E Y A V G+PS VP+G +GLPVGL
Sbjct: 412 ALVAPTTGVAWPIRSEGDDFPGESY--SAAAVAGYPSLTVPMGQ-IDGLPVGLL 462
Score = 43.3 bits (103), Expect = 4e-05
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVYYAMLSNVIGFPSTNVPLGLGSNGLPVGLQ 66
L+ PT E Y + V G+PS VP+G +GLPVGL
Sbjct: 412 ALVAPTTGVAWPIRSEGDDFPGESY--SAAAVAGYPSLTVPMGQ-IDGLPVGLL 462
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH,
oxazole, oxadiazole, endoca degradation, membrane
protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB:
2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A*
2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A*
3qj9_A* 3qkv_A*
Length = 573
Score = 44.8 bits (106), Expect = 1e-05
Identities = 20/84 (23%), Positives = 25/84 (29%), Gaps = 30/84 (35%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGL---------------- 130
VL+ P A T V Y ML N + FP+ VP+
Sbjct: 463 VLLTPMLGP-ALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYF 521
Query: 131 -------------GSNGLPVGLQV 141
S GLPV +Q
Sbjct: 522 GDIWDIILKKAMKNSVGLPVAVQC 545
Score = 42.1 bits (99), Expect = 1e-04
Identities = 20/83 (24%), Positives = 25/83 (30%), Gaps = 30/83 (36%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVYYAMLSNVIGFPSTNVPLGL---------------- 56
VL+ P A T V Y ML N + FP+ VP+
Sbjct: 463 VLLTPMLGP-ALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYF 521
Query: 57 -------------GSNGLPVGLQ 66
S GLPV +Q
Sbjct: 522 GDIWDIILKKAMKNSVGLPVAVQ 544
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon
degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A
Length = 493
Score = 44.9 bits (107), Expect = 1e-05
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 16/71 (22%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSG----------------VYYAMLANVIGFPSTNVPLGL 130
+LI PT Q GE++L + + + NV G P+ ++P+G+
Sbjct: 383 LLILPTVTRQTPEIGELMLAKGTDLEGRQSAFISGSLQMLAFTVPFNVSGQPAISLPIGM 442
Query: 131 GSNGLPVGLQV 141
S+G+P+G+Q+
Sbjct: 443 SSDGMPIGVQI 453
Score = 42.6 bits (101), Expect = 7e-05
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 16/70 (22%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSG----------------VYYAMLSNVIGFPSTNVPLGL 56
+LI PT Q GE++L + + + NV G P+ ++P+G+
Sbjct: 383 LLILPTVTRQTPEIGELMLAKGTDLEGRQSAFISGSLQMLAFTVPFNVSGQPAISLPIGM 442
Query: 57 GSNGLPVGLQ 66
S+G+P+G+Q
Sbjct: 443 SSDGMPIGVQ 452
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on
protein structural and functional analyses; 2.00A
{Thermus thermophilus}
Length = 434
Score = 41.8 bits (99), Expect = 1e-04
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 10/64 (15%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVYYAML---------ANVIGFPSTNVPLGLGSNGLPV 137
L+ P P A G + +++G P+ +P G+PV
Sbjct: 350 ALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVPTLALPFAK-VEGMPV 408
Query: 138 GLQV 141
GLQV
Sbjct: 409 GLQV 412
Score = 40.2 bits (95), Expect = 4e-04
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 10/63 (15%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVYYAMLS---------NVIGFPSTNVPLGLGSNGLPV 63
L+ P P A G + +++G P+ +P G+PV
Sbjct: 350 ALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVPTLALPFAK-VEGMPV 408
Query: 64 GLQ 66
GLQ
Sbjct: 409 GLQ 411
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 41.4 bits (96), Expect = 2e-04
Identities = 35/260 (13%), Positives = 68/260 (26%), Gaps = 76/260 (29%)
Query: 2 SLDLEILGTDGVLIYPTFP------AQAQRHGEILLTTSGVYYAMLSNVIGFP--STNVP 53
+ L++ + V F +L + Y + N S+N+
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 54 LGLGS-NGLPVGLQAGQQLA-SYITDGEEILGTDGV---LIYPTFPAQAQRHGEILLTTS 108
L + S L + + +L V + F + ILLTT
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLL-----VL--LNVQNAKAWNAFNLSCK----ILLTTR 273
Query: 109 GVYYAMLANVIGFPSTNVP---------------------LGLGSNGLPVGLQVCETASV 147
+ + + + +T L LP +V T
Sbjct: 274 ---FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR--EVLTTNPR 328
Query: 148 AQSVTSFGVSTHSRLIPSTPQYLDNIDSPRRSTAVDYVWTQVKGFIN------IKLMFV- 200
S+ S +T +++ + +T ++ +N + MF
Sbjct: 329 RLSI--IAESIRDG--LATWDNWKHVNCDKLTTI-------IESSLNVLEPAEYRKMFDR 377
Query: 201 -------VKITSH-LVDYWS 212
I + L W
Sbjct: 378 LSVFPPSAHIPTILLSLIWF 397
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB:
3a1i_A
Length = 521
Score = 40.7 bits (96), Expect = 2e-04
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVYYAML--------ANVIGFPSTNVPLGLGSNGLPVG 138
VL+ PT P A + + L +V G PS +VP GL NGLPVG
Sbjct: 419 VLVMPTLPYVASELPAKDVDRATFITKALGMIANTAPFDVTGHPSLSVPAGL-VNGLPVG 477
Query: 139 LQV 141
+ +
Sbjct: 478 MMI 480
Score = 39.6 bits (93), Expect = 6e-04
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVYYAMLS--------NVIGFPSTNVPLGLGSNGLPVG 64
VL+ PT P A + + L +V G PS +VP GL NGLPVG
Sbjct: 419 VLVMPTLPYVASELPAKDVDRATFITKALGMIANTAPFDVTGHPSLSVPAGL-VNGLPVG 477
Query: 65 LQ 66
+
Sbjct: 478 MM 479
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP:
c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A
1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Length = 414
Score = 40.6 bits (96), Expect = 3e-04
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 141
VL+ + P A L +T Y L ++G P NVP+ GLP+G+QV
Sbjct: 338 VLLTYSAPGTAPAKA--LASTGDPRYNRLWTLMGNPCVNVPVL-KVGGLPIGVQV 389
Score = 37.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVYYAMLSNVIGFPSTNVPLGLGSNGLPVGLQ 66
VL+ + P A L +T Y L ++G P NVP+ GLP+G+Q
Sbjct: 338 VLLTYSAPGTAPAKA--LASTGDPRYNRLWTLMGNPCVNVPVL-KVGGLPIGVQ 388
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 38.9 bits (90), Expect = 0.001
Identities = 46/267 (17%), Positives = 80/267 (29%), Gaps = 71/267 (26%)
Query: 15 IYPTFPAQAQRHGEI------LLTTSGVYYAMLSNVIGFPSTNV-PLGLGSNGLPVGLQA 67
+ F Q G L Y+ ++ ++I F + + L +
Sbjct: 156 LVAIFGGQ----GNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ 211
Query: 68 GQQLASYITDGEEILGTDGVLIYP-TFPAQAQRHGEILLTTSGVYYAMLANVIGF-PSTN 125
G + ++ + D +L P + P I + +Y + A ++GF P
Sbjct: 212 GLNILEWLENPSNTPDKDYLLSIPISCPL-------IGVI-QLAHYVVTAKLLGFTPGEL 263
Query: 126 VPLGLGSNGLPVGLQVCETASVAQSVTSF--------------GVSTH-----SRLIPST 166
G+ G GL + S SF GV + + L PS
Sbjct: 264 RSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI 323
Query: 167 PQYLDNID------SPR---RSTAVDYVWTQVKGF---------INIKL-----MFVVKI 203
+ D+++ SP + + V V + I L VV
Sbjct: 324 LE--DSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVV-- 379
Query: 204 TSHLVDYWS--PALHKVMA--GPNQDR 226
+ + L K A G +Q R
Sbjct: 380 SGPPQSLYGLNLTLRKAKAPSGLDQSR 406
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural
genomics, joint center for structura genomics, JCSG;
HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP:
c.117.1.1 PDB: 3al0_A*
Length = 476
Score = 37.1 bits (87), Expect = 0.004
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 18/65 (27%)
Query: 87 VLIYPTFPAQAQRHGEI----------LLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLP 136
++ PT P A + GEI + T AN+ G P+ +VP G SN LP
Sbjct: 384 AILTPTSPVTAFKIGEIKDPLTYYLMDIFTIP-------ANLAGLPAISVPFGF-SNNLP 435
Query: 137 VGLQV 141
VG+QV
Sbjct: 436 VGVQV 440
Score = 35.2 bits (82), Expect = 0.017
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 18/64 (28%)
Query: 13 VLIYPTFPAQAQRHGEI----------LLTTSGVYYAMLSNVIGFPSTNVPLGLGSNGLP 62
++ PT P A + GEI + T +N+ G P+ +VP G SN LP
Sbjct: 384 AILTPTSPVTAFKIGEIKDPLTYYLMDIFTIP-------ANLAGLPAISVPFGF-SNNLP 435
Query: 63 VGLQ 66
VG+Q
Sbjct: 436 VGVQ 439
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab,
ATP-binding, aminoacyl-tRNA synthetase, ligas
nucleotide-binding, protein biosynthesis, ligase-RNA
comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Length = 471
Score = 36.0 bits (84), Expect = 0.010
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 18/65 (27%)
Query: 87 VLIYPTFPAQAQRHGEI----------LLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLP 136
+L+ PT P A G L T AN+ G P+ + P G LP
Sbjct: 381 LLLLPTTPHPAFPFGARRDPLAMYREDLYTVG-------ANLTGLPALSFPAGF-EGHLP 432
Query: 137 VGLQV 141
VGLQ+
Sbjct: 433 VGLQL 437
Score = 34.1 bits (79), Expect = 0.044
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 18/64 (28%)
Query: 13 VLIYPTFPAQAQRHGEI----------LLTTSGVYYAMLSNVIGFPSTNVPLGLGSNGLP 62
+L+ PT P A G L T +N+ G P+ + P G LP
Sbjct: 381 LLLLPTTPHPAFPFGARRDPLAMYREDLYTVG-------ANLTGLPALSFPAGF-EGHLP 432
Query: 63 VGLQ 66
VGLQ
Sbjct: 433 VGLQ 436
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein
complex, ligase, protein biosynthesis; HET: ADP; 2.30A
{Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Length = 478
Score = 34.4 bits (80), Expect = 0.027
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 87 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 141
V+ PT P + GE L +Y + AN+ G P+ ++P+ +GLPVG Q+
Sbjct: 391 VIASPTTPTLPFKFGERLENPIEMYLSDILTVPANLAGLPAISIPIAW-KDGLPVGGQL 448
Score = 32.5 bits (75), Expect = 0.13
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 13 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLSNVIGFPSTNVPLGLGSNGLPVGLQ 66
V+ PT P + GE L +Y + +N+ G P+ ++P+ +GLPVG Q
Sbjct: 391 VIASPTTPTLPFKFGERLENPIEMYLSDILTVPANLAGLPAISIPIAW-KDGLPVGGQ 447
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein
complex, ligase, ATP-binding, nucleotide-bindi protein
biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB:
2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A
Length = 485
Score = 34.4 bits (80), Expect = 0.031
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 19/66 (28%)
Query: 87 VLIYPTFPAQAQRHGEI-----------LLTTSGVYYAMLANVIGFPSTNVPLGLGSNGL 135
V++ PT P A GE LLTT N+ G P +VP G SNG
Sbjct: 398 VVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTP-------VNLAGLPGISVPCGQ-SNGR 449
Query: 136 PVGLQV 141
P+GLQ
Sbjct: 450 PIGLQF 455
Score = 32.1 bits (74), Expect = 0.15
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 19/65 (29%)
Query: 13 VLIYPTFPAQAQRHGEI-----------LLTTSGVYYAMLSNVIGFPSTNVPLGLGSNGL 61
V++ PT P A GE LLTT N+ G P +VP G SNG
Sbjct: 398 VVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTP-------VNLAGLPGISVPCGQ-SNGR 449
Query: 62 PVGLQ 66
P+GLQ
Sbjct: 450 PIGLQ 454
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM
barrel, riken S genomics/proteomics initiative, RSGI,
structural genomics,; 2.00A {Aeropyrum pernix} SCOP:
c.1.10.1
Length = 234
Score = 29.1 bits (66), Expect = 1.3
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 26/73 (35%)
Query: 69 QQLASYI---------TDGEEI---------LGTDGVLIYPTFPAQAQRHGEILLTTSGV 110
+ LAS I T+ E++ G ++ P + + L GV
Sbjct: 18 EDLASRIDSTLLSPRATE-EDVRNLVREASDYGFRCAVLTPVYTVKISG----LAEKLGV 72
Query: 111 YYAMLANVIGFPS 123
L +VIGFP
Sbjct: 73 ---KLCSVIGFPL 82
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel,
lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB:
1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A
3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Length = 260
Score = 28.0 bits (63), Expect = 2.8
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 79 EEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPS 123
+ T + IYP F A++ L G +A V FP
Sbjct: 39 TPVGNTAAICIYPRFIPIARK----TLKEQGTPEIRIATVTNFPH 79
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A
{Saccharomyces cerevisiae} SCOP: b.86.1.2
Length = 237
Score = 27.5 bits (60), Expect = 3.6
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 196 KLMFVVKITSHLVDYWSPALHKVMAGPNQDRLCLAVAKKLEDIFYGWTMPNST 248
L V+ ++ ++P + + ED +YG T+ + +
Sbjct: 176 LLGSHVRKATYQ--TYAPIGAAFARECRG--FYFELQELKEDDYYGITLSDDS 224
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics,
structural genomics center for infectious disease,
ssgcid; 1.70A {Entamoeba histolytica}
Length = 239
Score = 27.2 bits (61), Expect = 4.8
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Query: 82 LGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPS 123
V + PT+ LL +GV + VIGFP
Sbjct: 55 YKFASVCVNPTWVPLCAE----LLKGTGV---KVCTVIGFPL 89
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE CIT; 1.75A {Thermotoga maritima} PDB: 1o0y_A*
3r13_A*
Length = 260
Score = 27.2 bits (61), Expect = 5.0
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 26/73 (35%)
Query: 69 QQLASYI---------TDGEEI---------LGTDGVLIYPTFPAQAQRHGEILLTTSGV 110
+ + S I T ++I GV + P + A+ L + V
Sbjct: 41 EDVKSAIEHTNLKPFATP-DDIKKLCLEARENRFHGVCVNPCYVKLARE----ELEGTDV 95
Query: 111 YYAMLANVIGFPS 123
+ V+GFP
Sbjct: 96 ---KVVTVVGFPL 105
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate,
carbinolamine, structural genomics, riken structural
genomics/proteomics initiative; HET: HPD; 1.40A {Thermus
thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Length = 220
Score = 26.7 bits (60), Expect = 6.2
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Query: 82 LGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPS 123
G G+ I P++ A + + L V+GFP
Sbjct: 31 YGFYGLCIPPSYVAWVRA----RYPHAPF---RLVTVVGFPL 65
>3oa3_A Aldolase; structural genomics, seattle structural genomics center
for infectious disease, ssgcid, pathogenic fungus; 1.60A
{Coccidioides immitis}
Length = 288
Score = 26.5 bits (59), Expect = 9.3
Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 26/72 (36%)
Query: 70 QLASYI---------TDGEEI---------LGTDGVLIYPTFPAQAQRHGEILLTTSGVY 111
+A I T +I G V + P + ++A + L + V
Sbjct: 57 SIAQIIDHTQLSLSATG-SQIDVLCAEAKEYGFATVCVRPDYVSRAVQ----YLQGTQV- 110
Query: 112 YAMLANVIGFPS 123
+ VIGF
Sbjct: 111 --GVTCVIGFHE 120
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.137 0.409
Gapped
Lambda K H
0.267 0.0749 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,917,392
Number of extensions: 231698
Number of successful extensions: 400
Number of sequences better than 10.0: 1
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 31
Length of query: 256
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 165
Effective length of database: 4,160,982
Effective search space: 686562030
Effective search space used: 686562030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (25.3 bits)