BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1973
         (252 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B2KIK3|UBL4A_RHIFE Ubiquitin-like protein 4A OS=Rhinolophus ferrumequinum GN=UBL4A
           PE=3 SV=1
          Length = 160

 Score = 74.3 bits (181), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 8/136 (5%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK- 175
           ++V+ +  +  LK+ ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK 
Sbjct: 15  LQVSEDELVSTLKHVVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKP 73

Query: 176 --RALKESSQSVAGGSNVTILRDASY----KFLRKYFTETQSNKIADEFIKEFNKSISTL 229
             + L E S +    +   + R  ++    K L ++F+   ++++ D+  +++ +S+S L
Sbjct: 74  LEKVLLEESAAACRLTEAPLPRPPAWQLIAKVLARHFSAADASRVLDQLQRDYERSLSRL 133

Query: 230 SLDDLEALASSYLMEE 245
           +LDD+E LAS +L  E
Sbjct: 134 TLDDIERLASRFLHPE 149



 Score = 65.1 bits (157), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V+ +  +  LK+ ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECSLQVSEDELVSTLKHVVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61  QIKEGTKLNLVVK---RALKESSQSVAGGSNVTILRDASY----KFLRKYFTETQSNKIA 113
            I   +KLNLVVK   + L E S +    +   + R  ++    K L ++F+   ++++ 
Sbjct: 60  SIGPNSKLNLVVKPLEKVLLEESAAACRLTEAPLPRPPAWQLIAKVLARHFSAADASRVL 119

Query: 114 DEF 116
           D+ 
Sbjct: 120 DQL 122


>sp|Q7ZWB2|UBL4A_DANRE Ubiquitin-like protein 4A OS=Danio rerio GN=ubl4a PE=2 SV=1
          Length = 157

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V     +  +K  ++E L IP S Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKESSQSVA--------GGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSIST 228
           A + SS +V         GGS V  L       L K+F+   + K+ ++ IK++ +S+  
Sbjct: 74  AGERSSGAVGTSSANNDKGGSGVWQLLST---VLAKHFSPADAAKVQEQLIKDYERSLRQ 130

Query: 229 LSLDDLEALASSYLMEE 245
           LSLDD+E LAS  L  E
Sbjct: 131 LSLDDIERLASRLLHPE 147



 Score = 61.2 bits (147), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 12/126 (9%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M ++VK LQG+E  + V     +  +K  ++E L IP S Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTVKPLQGKECNVQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVA--------GGSNVTILRDASYKFLRKYFTETQSNKI 112
            I    KLNLVV+ A + SS +V         GGS V  L       L K+F+   + K+
Sbjct: 60  SIGPEAKLNLVVRPAGERSSGAVGTSSANNDKGGSGVWQLLST---VLAKHFSPADAAKV 116

Query: 113 ADEFIK 118
            ++ IK
Sbjct: 117 QEQLIK 122


>sp|A4QND0|UBL4A_XENTR Ubiquitin-like protein 4A OS=Xenopus tropicalis GN=ubl4a PE=2 SV=1
          Length = 148

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 6/126 (4%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           I+V+   ++L +K  + E LK+PVS Q+LL  G+ L D   +  Y  I  G++LNL+VK 
Sbjct: 15  IQVSEGDTVLAVKRLVEEKLKVPVSQQRLLFRGKALADEHCLAHY-SIGPGSRLNLMVKE 73

Query: 177 ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEA 236
            +     S  GG+  T  +  S   LRK+F+ T + ++ +   K++ +S+S LSLDD+E 
Sbjct: 74  QVAPEGHS--GGN--TAWKSLSV-ILRKHFSPTDAERVLEYVQKDYERSLSLLSLDDIER 128

Query: 237 LASSYL 242
           LA+  L
Sbjct: 129 LATRIL 134



 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 7/125 (5%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK L+G+E  + V+   ++L +K  + E LK+PVS Q+LL  G+ L D   +  Y 
Sbjct: 1   MQLTVKALKGKEANIQVSEGDTVLAVKRLVEEKLKVPVSQQRLLFRGKALADEHCLAHY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
            I  G++LNL+VK  +     S  GG+  T  +  S   LRK+F+ T + ++  E+++ +
Sbjct: 60  SIGPGSRLNLMVKEQVAPEGHS--GGN--TAWKSLSV-ILRKHFSPTDAERVL-EYVQKD 113

Query: 121 SEMSI 125
            E S+
Sbjct: 114 YERSL 118


>sp|P21126|UBL4A_MOUSE Ubiquitin-like protein 4A OS=Mus musculus GN=Ubl4a PE=2 SV=1
          Length = 157

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 5/122 (4%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRA----LKESSQ 183
           LK+ +++ L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK      L+E S 
Sbjct: 26  LKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY-NIGPNSKLNLVVKPLEKVLLEEGSA 84

Query: 184 SVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYLM 243
                S  T +     K L ++F+   ++++ ++  +++++S+S L+LDD+E LAS +L 
Sbjct: 85  HRLVDSPATPIWQLISKVLARHFSVADASRVLEQLQRDYDRSLSRLTLDDIERLASRFLH 144

Query: 244 EE 245
            E
Sbjct: 145 PE 146



 Score = 57.8 bits (138), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 5/120 (4%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V  +  +  LK+ +++ L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECSLQVAEDELVSTLKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY- 59

Query: 61  QIKEGTKLNLVVKR----ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEF 116
            I   +KLNLVVK      L+E S      S  T +     K L ++F+   ++++ ++ 
Sbjct: 60  NIGPNSKLNLVVKPLEKVLLEEGSAHRLVDSPATPIWQLISKVLARHFSVADASRVLEQL 119


>sp|B2GV38|UBL4A_RAT Ubiquitin-like protein 4A OS=Rattus norvegicus GN=Ubl4a PE=2 SV=1
          Length = 157

 Score = 68.2 bits (165), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 5/122 (4%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRA----LKESSQ 183
           LK+ +++ L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK      L+E S 
Sbjct: 26  LKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY-NIGPNSKLNLVVKPLEKVLLEEGSA 84

Query: 184 SVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYLM 243
                S+ T +     K L ++F+   ++++ ++  +++++S+S L+LDD+E LAS +L 
Sbjct: 85  HRLVDSSATPIWQLISKVLARHFSIGDASRVLEQLQRDYDRSLSRLTLDDIERLASRFLH 144

Query: 244 EE 245
            E
Sbjct: 145 PE 146



 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V  +  +  LK+ +++ L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECSLQVAEDELVSTLKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY- 59

Query: 61  QIKEGTKLNLVVKR----ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEF 116
            I   +KLNLVVK      L+E S      S+ T +     K L ++F+   ++++ ++ 
Sbjct: 60  NIGPNSKLNLVVKPLEKVLLEEGSAHRLVDSSATPIWQLISKVLARHFSIGDASRVLEQL 119


>sp|Q0D261|UBL4A_XENLA Ubiquitin-like protein 4A OS=Xenopus laevis GN=ubl4a PE=2 SV=1
          Length = 148

 Score = 68.2 bits (165), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 116 FIKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
            I+V+   ++L +K  + E L++PVS Q+LL  G+ L D +  L +  I  G++LNL+VK
Sbjct: 14  HIQVSEGDTVLAVKRLVEEKLQVPVSQQRLLFRGKSLAD-EHCLSHYSIGPGSRLNLMVK 72

Query: 176 RALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLE 235
             +     S     N T  +  S   LRK+F+   + ++ +   K++ +S+S LSLDD+E
Sbjct: 73  DQVAPEGHS----GNNTAWKSLSV-ILRKHFSPADAERVLEYVQKDYERSLSLLSLDDIE 127

Query: 236 ALASSYL 242
            LA+  L
Sbjct: 128 RLATRIL 134



 Score = 61.2 bits (147), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 7/125 (5%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK L+G+E  + V+   ++L +K  + E L++PVS Q+LL  G+ L D +  L + 
Sbjct: 1   MQLTVKALKGKEAHIQVSEGDTVLAVKRLVEEKLQVPVSQQRLLFRGKSLAD-EHCLSHY 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
            I  G++LNL+VK  +     S     N T  +  S   LRK+F+   + ++  E+++ +
Sbjct: 60  SIGPGSRLNLMVKDQVAPEGHS----GNNTAWKSLSV-ILRKHFSPADAERVL-EYVQKD 113

Query: 121 SEMSI 125
            E S+
Sbjct: 114 YERSL 118


>sp|B1MTV8|UBL4A_CALMO Ubiquitin-like protein 4A OS=Callicebus moloch GN=UBL4A PE=3 SV=1
          Length = 157

 Score = 67.8 bits (164), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 5/122 (4%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRA----LKESSQ 183
           LK  ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK      L+E + 
Sbjct: 26  LKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKPLEKVLLEEGAG 84

Query: 184 SVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYLM 243
                S  T +     K L ++F+   ++++ ++  +++ +S+S L+LDD+E LAS +L 
Sbjct: 85  RRLADSPPTQVWQLISKVLARHFSAADASRVLEQLQRDYQRSLSRLTLDDIERLASRFLH 144

Query: 244 EE 245
            E
Sbjct: 145 PE 146



 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 5/120 (4%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61  QIKEGTKLNLVVKR----ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEF 116
            I   +KLNLVVK      L+E +      S  T +     K L ++F+   ++++ ++ 
Sbjct: 60  SIGPNSKLNLVVKPLEKVLLEEGAGRRLADSPPTQVWQLISKVLARHFSAADASRVLEQL 119


>sp|B7NZQ9|UBL4A_RABIT Ubiquitin-like protein 4A OS=Oryctolagus cuniculus GN=UBL4A PE=3
           SV=1
          Length = 157

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 5/133 (3%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK 
Sbjct: 15  LQVPEDEQVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKP 73

Query: 177 A----LKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLD 232
                L E +      S    +     K L ++F+   ++++ ++  +++ +S+S L+LD
Sbjct: 74  LEKVLLAEGTARRLADSPPPPVWHLISKVLARHFSAADASRVLEQLQRDYERSLSRLTLD 133

Query: 233 DLEALASSYLMEE 245
           D+E LAS +L  E
Sbjct: 134 DIERLASRFLHPE 146



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 5/120 (4%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECNLQVPEDEQVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61  QIKEGTKLNLVVKR----ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEF 116
            I   +KLNLVVK      L E +      S    +     K L ++F+   ++++ ++ 
Sbjct: 60  SIGPNSKLNLVVKPLEKVLLAEGTARRLADSPPPPVWHLISKVLARHFSAADASRVLEQL 119


>sp|P11441|UBL4A_HUMAN Ubiquitin-like protein 4A OS=Homo sapiens GN=UBL4A PE=1 SV=1
          Length = 157

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 7/123 (5%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK---RALKES--S 182
           LK  ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK   + L E   +
Sbjct: 26  LKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKPLEKVLLEEGEA 84

Query: 183 QSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYL 242
           Q +A      + +  S K L ++F+   ++++ ++  +++ +S+S L+LDD+E LAS +L
Sbjct: 85  QRLADSPPPQVWQLIS-KVLARHFSAADASRVLEQLQRDYERSLSRLTLDDIERLASRFL 143

Query: 243 MEE 245
             E
Sbjct: 144 HPE 146



 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 7/121 (5%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+++VK LQG+E  L V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1   MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61  QIKEGTKLNLVVK---RALKE--SSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADE 115
            I   +KLNLVVK   + L E   +Q +A      + +  S K L ++F+   ++++ ++
Sbjct: 60  SIGPNSKLNLVVKPLEKVLLEEGEAQRLADSPPPQVWQLIS-KVLARHFSAADASRVLEQ 118

Query: 116 F 116
            
Sbjct: 119 L 119


>sp|C1BGZ8|UB4AA_ONCMY Ubiquitin-like protein 4A-A OS=Oncorhynchus mykiss GN=ubl4aa PE=2
           SV=1
          Length = 154

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 13/133 (9%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP S Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTEDEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKES-------SQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTL 229
           A + S       S S  GG   T+        L K+F+   + K+ ++ +K++ +S+  L
Sbjct: 74  AGERSGVAGMASSSSAVGGVWQTL-----STVLAKHFSPADAAKVQEQLVKDYERSLRQL 128

Query: 230 SLDDLEALASSYL 242
           S+DD+E LA   L
Sbjct: 129 SMDDIERLAGRLL 141



 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 13/125 (10%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M ++VK LQG+E  + V  +  +  +K  ++E L IP S Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTVKPLQGKECNVQVTEDEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKE-------SSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIA 113
            I    KLNLVV+ A +        SS S  GG   T+        L K+F+   + K+ 
Sbjct: 60  SIGPEAKLNLVVRPAGERSGVAGMASSSSAVGGVWQTL-----STVLAKHFSPADAAKVQ 114

Query: 114 DEFIK 118
           ++ +K
Sbjct: 115 EQLVK 119


>sp|Q5R4T1|UBL4A_PONAB Ubiquitin-like protein 4A OS=Pongo abelii GN=UBL4A PE=2 SV=1
          Length = 157

 Score = 64.7 bits (156), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 7/123 (5%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK---RALKES--S 182
           LK  ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK   + L E   +
Sbjct: 26  LKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKPLEKVLLEEGEA 84

Query: 183 QSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYL 242
           Q +A      + +  S K L ++F+   ++++ ++  +++ +S+S L+LDD+E LAS +L
Sbjct: 85  QRLADSPPPQVWQLIS-KVLARHFSAADASRVLEQPQRDYERSLSRLTLDDIERLASRFL 143

Query: 243 MEE 245
             E
Sbjct: 144 HPE 146



 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 1  MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
          M+++VK LQG+E  L V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1  MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61 QIKEGTKLNLVVK 73
           I   +KLNLVVK
Sbjct: 60 SIGPNSKLNLVVK 72


>sp|B0KWT6|UBL4A_CALJA Ubiquitin-like protein 4A OS=Callithrix jacchus GN=UBL4A PE=3 SV=1
          Length = 157

 Score = 64.3 bits (155), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 5/122 (4%)

Query: 128 LKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRA----LKESSQ 183
           LK  ++E L +PV  Q+LL  G+ L D K++ DY  I   +KLNLVVK      L+E + 
Sbjct: 26  LKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY-SIGPNSKLNLVVKPLEKVLLEEGTG 84

Query: 184 SVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEALASSYLM 243
                S    +     K L ++F+   ++++ ++  +++ +S+S L+LDD+E LA  +L 
Sbjct: 85  RRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERSLSRLTLDDIERLAGRFLH 144

Query: 244 EE 245
            E
Sbjct: 145 PE 146



 Score = 54.3 bits (129), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 1  MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
          M+++VK LQG++  L V  +  +  LK  ++E L +PV  Q+LL  G+ L D K++ DY 
Sbjct: 1  MQLTVKALQGRDCSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY- 59

Query: 61 QIKEGTKLNLVVK 73
           I   +KLNLVVK
Sbjct: 60 SIGPNSKLNLVVK 72


>sp|C1BXU5|UBL4A_ESOLU Ubiquitin-like protein 4A OS=Esox lucius GN=ubl4a PE=2 SV=1
          Length = 154

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTEDEKVSTVKELVSERLNIPPNQQRLLYKGKALADEHRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKESSQSVAGGSNVTI--LRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDL 234
           A + S  +    SN  +  +       L K+F+   + K+ ++ IK++ +S+  LSLDD+
Sbjct: 74  AGERSGVTGMASSNSAVGGVWQTLSTVLAKHFSPADAAKVQEQLIKDYERSLRQLSLDDI 133

Query: 235 EALA 238
           E LA
Sbjct: 134 ERLA 137



 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M ++VK LQG+E  + V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTVKPLQGKECNVQVTEDEKVSTVKELVSERLNIPPNQQRLLYKGKALADEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTI--LRDASYKFLRKYFTETQSNKIADEFIK 118
            I    KLNLVV+ A + S  +    SN  +  +       L K+F+   + K+ ++ IK
Sbjct: 60  SIGPEAKLNLVVRPAGERSGVTGMASSNSAVGGVWQTLSTVLAKHFSPADAAKVQEQLIK 119


>sp|B5X9S9|UB4AB_SALSA Ubiquitin-like protein 4A-B OS=Salmo salar GN=ubl4ab PE=2 SV=1
          Length = 151

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEHRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEA 236
           A + S  + +  +   + +  S   L K+F+   + K+ ++ +K++ +S+  LSLDD+E 
Sbjct: 74  AGERSGMASSSSAVSGVWQTLS-TVLAKHFSPADAAKVQEQLVKDYERSLRQLSLDDIER 132

Query: 237 LASSYL 242
           LA   L
Sbjct: 133 LAGRLL 138



 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M +++K LQG+E  + V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTIKPLQGKECNVQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIK 118
            I    KLNLVV+ A + S  + +  +   + +  S   L K+F+   + K+ ++ +K
Sbjct: 60  SIGPEAKLNLVVRPAGERSGMASSSSAVSGVWQTLS-TVLAKHFSPADAAKVQEQLVK 116


>sp|C1BHN7|UB4AB_ONCMY Ubiquitin-like protein 4A-B OS=Oncorhynchus mykiss GN=ubl4ab PE=2
           SV=1
          Length = 151

 Score = 58.9 bits (141), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEYRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDLEA 236
           A + S  + +  +   + +  S   L K+F+   + K+ ++ IK++ +S+  LSLDD+E 
Sbjct: 74  AGERSGMASSSSAVSGVWQTLS-TVLAKHFSPADAAKVHEQLIKDYERSLRQLSLDDIER 132

Query: 237 LASSYL 242
           LA   L
Sbjct: 133 LAGRLL 138



 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M +++K L+G+E  + V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTIKPLKGKECNVQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEYRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIK 118
            I    KLNLVV+ A + S  + +  +   + +  S   L K+F+   + K+ ++ IK
Sbjct: 60  SIGPEAKLNLVVRPAGERSGMASSSSAVSGVWQTLS-TVLAKHFSPADAAKVHEQLIK 116


>sp|B5XFI8|UB4AA_SALSA Ubiquitin-like protein 4A-A OS=Salmo salar GN=ubl4aa PE=2 SV=1
          Length = 154

 Score = 58.2 bits (139), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY  I    KLNLVV+ 
Sbjct: 15  VQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALADEHRLSDY-SIGPEAKLNLVVRP 73

Query: 177 ALKESSQSVAGGSNVTILRDASY--KFLRKYFTETQSNKIADEFIKEFNKSISTLSLDDL 234
           A + S  +    S+  +          L K+F+   + K+ ++ +K++ +S+  LSLDD+
Sbjct: 74  AGERSGVAGMASSSSAVSGVWQTLSTVLAKHFSPADAAKVQEQLVKDYERSLRQLSLDDI 133

Query: 235 EALASSYL 242
           E LA   L
Sbjct: 134 ERLAGRLL 141



 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M ++VK LQG+E  + V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTVKPLQGKECNVQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALADEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASY--KFLRKYFTETQSNKIADEFIK 118
            I    KLNLVV+ A + S  +    S+  +          L K+F+   + K+ ++ +K
Sbjct: 60  SIGPEAKLNLVVRPAGERSGVAGMASSSSAVSGVWQTLSTVLAKHFSPADAAKVQEQLVK 119


>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
          Length = 457

 Score = 58.2 bits (139), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  NQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 LQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376



 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 SSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 452



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK + G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKEST-LHLVLR 300


>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
          Length = 356

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 29/176 (16%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNK-IADEFIKV 119
             KE T L+LV++         + GG  +              F +T + K IA   ++V
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIA---LEV 93

Query: 120 NSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
            S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 94  ESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 29/176 (16%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNK-IADEFIKV 119
             KE T L+LV++         + GG  +              F +T + K IA   ++V
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIA---LEV 245

Query: 120 NSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
            S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 246 ESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300


>sp|P0CG73|UBI1P_CANAX Polyubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1
          Length = 229

 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 137 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 170

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 171 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 224



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++           GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLRS---------RGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148


>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
          Length = 423

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  ++  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 178 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 211

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  ++  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 212 SSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 265



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  ++  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 270 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 329

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 330 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 363

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  ++  +K+KI +   IP   Q+++  G+ L D + + DY   KE T L+LV++
Sbjct: 364 SSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKEST-LHLVLR 417



 Score = 55.5 bits (132), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  ++  +K+KI +   IP   Q+L+  G+ L D   + DY 
Sbjct: 42  MQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYN 101

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 102 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 135

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  ++  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 136 SSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 189



 Score = 37.4 bits (85), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 27/140 (19%)

Query: 36  IPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDA 95
           IP   Q+L+  G+ L D + + DY   KE T L+LV++         + GG  +      
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR---------LRGGMQI------ 44

Query: 96  SYKFLRKYFTETQSNKIADEFIKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDT 155
                   F +T + K     ++V S  ++  +K+KI +   IP   Q+L+  G+ L D 
Sbjct: 45  --------FVKTLTGKTIT--LEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDG 94

Query: 156 KQILDYPQIKEGTKLNLVVK 175
             + DY   KE T L+LV++
Sbjct: 95  LTLADYNIQKEST-LHLVLR 113


>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
          Length = 305

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300


>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
           S288c) GN=UBI4 PE=1 SV=1
          Length = 381

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376


>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
           / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
           PE=1 SV=1
          Length = 381

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376


>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
           24843) GN=ubi4 PE=1 SV=1
          Length = 382

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K+KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376


>sp|P0C032|RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa
           subsp. japonica GN=RUB3 PE=3 SV=2
          Length = 154

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 31/176 (17%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K K+ +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG NV +                    +  + I ++
Sbjct: 61  IQKEST-LHLVLR---------LRGGLNVKV------------------RTLTGKEIDID 92

Query: 121 SEM--SILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVV 174
            EM  ++  +K ++ E   IP   Q+L+  G+ L D K   DY +I+ G+ L+LV+
Sbjct: 93  IEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDY-KIEAGSVLHLVL 147


>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
          Length = 306

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300


>sp|P0CG83|UBIQP_HORVU Polyubiquitin (Fragment) OS=Hordeum vulgare PE=2 SV=1
          Length = 171

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 19  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 78

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 79  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 112

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 113 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 166


>sp|P0CH33|UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis thaliana GN=UBQ11 PE=1 SV=1
          Length = 229

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 137 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 170

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 171 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 224


>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
          Length = 382

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 376


>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
          Length = 458

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 452


>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
          Length = 458

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 452


>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
          Length = 381

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 376


>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
          Length = 377

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 73  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 132

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 133 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 166

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 167 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 220



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 225 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 284

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 285 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 318

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 319 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 372



 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 27/171 (15%)

Query: 5   VKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKE 64
           VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 65  GTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVNSEMS 124
            T L+LV++         + GG  +              F +T + K     ++V S  +
Sbjct: 61  ST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVESSDT 94

Query: 125 ILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 144


>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
          Length = 305

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300


>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
          Length = 305

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300


>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
          Length = 305

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300


>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
          Length = 381

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 137 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 170

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 171 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 224



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 376



 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148


>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
          Length = 305

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 178 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 211

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 212 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 265



 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I +K L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 42  MQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 101

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 102 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 135

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 136 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 189



 Score = 39.3 bits (90), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 27/140 (19%)

Query: 36  IPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDA 95
           IP   Q+L+  G+ L D + + DY   KE T L+LV++                  LR  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR------------------LRGG 41

Query: 96  SYKFLRKYFTETQSNKIADEFIKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDT 155
              FL+    +T +       ++V S  +I  +K KI +   IP   Q+L+  G+ L D 
Sbjct: 42  MQIFLKTLTGKTIT-------LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 94

Query: 156 KQILDYPQIKEGTKLNLVVK 175
           + + DY   KE T L+LV++
Sbjct: 95  RTLADYNIQKEST-LHLVLR 113


>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
          Length = 457

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 452


>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
          Length = 457

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 300



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 452


>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
           / CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
          Length = 305

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  SSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 SSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300


>sp|C3KHF2|UBL4A_ANOFI Ubiquitin-like protein 4A OS=Anoplopoma fimbria GN=ubl4a PE=2 SV=1
          Length = 156

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 117 IKVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVKR 176
           ++V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY  I    KLNLV++ 
Sbjct: 15  VQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALSDEHRLSDY-SIGPEAKLNLVIRP 73

Query: 177 ALKESSQSVAGGSNVTILRDASYK----FLRKYFTETQSNKIADEFIKEFNKSISTLSLD 232
             + +  S    S+ +  +   ++     L ++F+   + K+ ++ IK++ +S+  LSLD
Sbjct: 74  VGERTGASGTAASSSSSSQGRVWQTVSTILARHFSPADAAKVHEQLIKDYERSLRQLSLD 133

Query: 233 DLEALASSYL 242
           D+E LA   L
Sbjct: 134 DIERLAGRLL 143



 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 6/132 (4%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M ++VK LQG+E  + V  +  +  +K  ++E L IP + Q+LL  G+ L D  ++ DY 
Sbjct: 1   MILTVKPLQGKECSVQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALSDEHRLSDY- 59

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYK----FLRKYFTETQSNKIADEF 116
            I    KLNLV++   + +  S    S+ +  +   ++     L ++F+   + K+ ++ 
Sbjct: 60  SIGPEAKLNLVIRPVGERTGASGTAASSSSSSQGRVWQTVSTILARHFSPADAAKVHEQL 119

Query: 117 IKVNSEMSILEL 128
           IK + E S+ +L
Sbjct: 120 IK-DYERSLRQL 130


>sp|P22589|UBIQP_PHYIN Polyubiquitin OS=Phytophthora infestans PE=1 SV=2
          Length = 229

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV    SI  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              SI  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  PSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV    SI  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 77  MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 137 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 170

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              SI  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 171 PSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 224


>sp|P23324|UBIQP_EUPEU Polyubiquitin OS=Euplotes eurystomus PE=3 SV=2
          Length = 229

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  QSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 148



 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 77  MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 137 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 170

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 171 QSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 224


>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
          Length = 457

 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LVV+
Sbjct: 247 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVVR 300



 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LVV+         + GG  +              F +T + K     ++V 
Sbjct: 289 IQKEST-LHLVVR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 452


>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
          Length = 381

 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I LDV +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 229 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     + V 
Sbjct: 289 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLDVE 322

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 323 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 376


>sp|Q9FHQ6|UBQ9_ARATH Polyubiquitin 9 OS=Arabidopsis thaliana GN=UBQ9 PE=3 SV=1
          Length = 322

 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V S  +I  +K KI +   +P   Q+L+  G+ L D + + DY 
Sbjct: 79  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++                  LR     F+R    +T    IA   ++V 
Sbjct: 139 IQKEST-LHLVLR------------------LRGGMQIFVRTLTRKT----IA---LEVE 172

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +   +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 173 SSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-LHLVLR 226



 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I  K L  + I +DV S  +I  +K KI +   IP+  Q+L+ +G+ L D + + DY 
Sbjct: 3   MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
            I++ + L+L ++         + GG  +              F +T + K     ++V 
Sbjct: 63  -IQKDSILHLALR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 96

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           S  +I  +K KI +   +P   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 97  SSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKEST-LHLVLR 150


>sp|P0CG68|UBC_PIG Polyubiquitin-C OS=Sus scrofa GN=UBC PE=2 SV=1
          Length = 533

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI E   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 452



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 441 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 474

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 475 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 528


>sp|P0CH28|UBC_BOVIN Polyubiquitin-C OS=Bos taurus GN=UBC PE=1 SV=1
          Length = 690

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI E   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 365 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 452



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 517 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 550

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 551 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 604



 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V    +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 593 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTIT--LEVE 626

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
              +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 627 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 680


>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
          Length = 838

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 61  IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 94

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 95  ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 148



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 213 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 246

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 247 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 300



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 517 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 550

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 551 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 604



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 669 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 702

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 703 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 756



 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++         + GG  +              F +T + K     ++V 
Sbjct: 745 IQKEST-LHLVLR---------LRGGMQI--------------FVKTLTGKTI--TLEVE 778

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 779 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 832



 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 1   MKISVKVLQGQEIFLDVNSEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYP 60
           M+I VK L G+ I L+V +  +I  +K KI +   IP   Q+L+  G+ L D + + DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 61  QIKEGTKLNLVVKRALKESSQSVAGGSNVTILRDASYKFLRKYFTETQSNKIADEFIKVN 120
             KE T L+LV++                  LR     F++    +T +       ++V 
Sbjct: 365 IQKEST-LHLVLR------------------LRGGMQIFVKTLIGKTIT-------LEVE 398

Query: 121 SEMSILELKNKINEALKIPVSDQKLLATGRPLLDTKQILDYPQIKEGTKLNLVVK 175
           +  +I  +K KI +   IP   Q+L+  G+ L D + + DY   KE T L+LV++
Sbjct: 399 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHLVLR 452


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.130    0.336 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,072,458
Number of Sequences: 539616
Number of extensions: 2992616
Number of successful extensions: 10719
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 9750
Number of HSP's gapped (non-prelim): 581
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)