BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1977
(764 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DWB|A Chain A, Structure Of Human Ece-1 Complexed With Phosphoramidon
Length = 670
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/685 (36%), Positives = 399/685 (58%), Gaps = 22/685 (3%)
Query: 87 TEGCVHTASNLLKNMDLNVDPCDDFYRFSCGKFLKETQIPDDKTAQTAFSVISDALEEQL 146
+E CV S++L +MD VDPC DF+ ++CG ++K +PD + FS + + + +
Sbjct: 1 SEACVSVTSSILSSMDPTVDPCHDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAII 60
Query: 147 RTIVEEP---IRENEPKPFKLVKNLYKACMNVKNIEILGLEPMKRMLQDLGGWPVLEGQN 203
+ ++E + E E K + Y+ACMN IE L +P+ +++ LGGW +
Sbjct: 61 KHLLENSTASVSEAERK----AQVYYRACMNETRIEELRAKPLMELIERLGGWNIT--GP 114
Query: 204 WNEETFSWKDSVYKFHENGYSVDYFIDFSIVINVKNNSERIIDLDQATLGL-SREY-LVK 261
W ++ F V H Y F + + KN++ +I +DQ+ LGL SR+Y L K
Sbjct: 115 WAKDNFQDTLQVVTAH---YRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNK 171
Query: 262 GINEKLVNAYYRYMIDIAVLLGA-DKDVATEELKESLEFEIKLANISLPLEQRRNATKLY 320
NEK++ Y YM+ + LLG D++ ++++ L+FE LANI++P E+RR+ +Y
Sbjct: 172 TENEKVLTGYLNYMVQLGKLLGGGDEEAIRPQMQQILDFETALANITIPQEKRRDEELIY 231
Query: 321 NPMSLDELQTKFPSIPWVEYLNTLLYPKDRLRETDIVVVDVPNYISKLEELLQTTPKKVQ 380
+ ++ ELQT P+I W+ +LNT+ YP + + E++ +VV Y+ ++ L+ TT + +
Sbjct: 232 HKVTAAELQTLAPAINWLPFLNTIFYPVE-INESEPIVVYDKEYLEQISTLINTTDRCLL 290
Query: 381 ANYALWRATAASVSYLTEAIRNRQLQYSTALSGRTQME-PRWKECVDTVSSSISLAMGAL 439
NY +W + S+L + ++ ++ + G + PRWK CV +++ A+G +
Sbjct: 291 NNYMIWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTSLPRWKFCVSDTENNLGFALGPM 350
Query: 440 YVRKFFKEDAKANAIEMVELIREEMNKILNTVEWMDNKTRRKALEKAKAMTAHIAYPDEL 499
+V+ F ED+K+ A E++ I++ + L+T++WMD +TR+ A EKA A+ I YP+ +
Sbjct: 351 FVKATFAEDSKSIATEIILEIKKAFEESLSTLKWMDEETRKSAKEKADAIYNMIGYPNFI 410
Query: 500 LDDNKISEFYDKLEIDPNNYYKSILNLTKFGTGYSFSLLRKPVNKTEWISHGHPALVNAF 559
+D ++ + ++ P+ Y+++ + F + LRK N+ +W P +VNA+
Sbjct: 411 MDPKELDKVFNDYTAVPDLYFENAMRFFNFSWRVTADQLRKAPNRDQW--SMTPPMVNAY 468
Query: 560 YSSIENSITFPAGILQGSFFSNDRPKYMNFGAIGFVIGHEITHGFDDQGRQFDKNGNLVD 619
YS +N I FPAGILQ F++ PK +NFG IG V+GHE+TH FDDQGR++DK+GNL
Sbjct: 469 YSPTKNEIVFPAGILQAPFYTRSSPKALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRP 528
Query: 620 WWQEDTKRSYIEKARCIIEQYGNYSVPEVNLTLNGVNNQGENIADNGGMKEAYNAYVNWA 679
WW+ + ++ + C++EQY NYSV +NG + GENIADNGG+K AY AY NW
Sbjct: 529 WWKNSSVEAFKRQTECMVEQYSNYSVN--GEPVNGRHTLGENIADNGGLKAAYRAYQNWV 586
Query: 680 ATHPAEPRLPGLQNFTPQQMFWISAASTWCSKHRPETLKLRITTGFHSPGEFRVLGPVSN 739
+ AE LP L T Q+F++ A WCS PE+ + T HSP FRV+G +SN
Sbjct: 587 KKNGAEHSLPTL-GLTNNQLFFLGFAQVWCSVRTPESSHEGLITDPHSPSRFRVIGSLSN 645
Query: 740 LESFSRDFQCPSGSRMNPVHKCKVW 764
+ FS F+CP GS MNP HKC+VW
Sbjct: 646 SKEFSEHFRCPPGSPMNPPHKCEVW 670
>pdb|1DMT|A Chain A, Structure Of Human Neutral Endopeptidase Complexed With
Phosphoramidon
pdb|1R1H|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1I|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1J|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1Y8J|A Chain A, Crystal Structure Of Human Nep Complexed With An
Imidazo[4,5- C]pyridine Inhibitor
pdb|2QPJ|A Chain A, Human Nep Complexed With A Bifunctional NepDPP IV
INHIBITOR
pdb|2YB9|A Chain A, Crystal Structure Of Human Neutral Endopeptidase Complexed
With A Heteroarylalanine Diacid
Length = 696
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/701 (35%), Positives = 396/701 (56%), Gaps = 26/701 (3%)
Query: 84 ICFTEGCVHTASNLLKNMDLNVDPCDDFYRFSCGKFLKETQIPDDKTAQTAFSVISDALE 143
IC + C+ +A+ L++NMD +PC DF++++CG +LK IP+ + F ++ D LE
Sbjct: 2 ICKSSDCIKSAARLIQNMDATTEPCTDFFKYACGGWLKRNVIPETSSRYGNFDILRDELE 61
Query: 144 EQLRTIVEEPIRENEPKPFKLVKNLYKACMNVKNIEILGLEPMKRMLQDLGGWPVLEGQN 203
L+ +++EP E + + K LY++C+N I+ G EP+ ++L D+ GWPV +N
Sbjct: 62 VVLKDVLQEPKTE-DIVAVQKAKALYRSCINESAIDSRGGEPLLKLLPDIYGWPVAT-EN 119
Query: 204 WNEE---TFSWKDSVYKFHENGYSVDYFIDFSIVINVKNNSERIIDLDQATLGL-SREYL 259
W ++ +++ + ++ + + Y I+ + + KN+ +I +DQ LGL SR+Y
Sbjct: 120 WEQKYGASWTAEKAIAQLNSK-YGKKVLINLFVGTDDKNSVNHVIHIDQPRLGLPSRDYY 178
Query: 260 -VKGINEKLVNAYYRYMIDIAVL------LGADKDVATEELKESLEFEIKLANISLPLEQ 312
GI ++ AY +MI +A L L D++ E+ + +E E ++AN + E
Sbjct: 179 ECTGIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPED 238
Query: 313 RRNATKLYNPMSLDELQTKFP------SIPWVEYLNTLLYPKD-RLRETDIVVVDVPNYI 365
R + LYN M+L ++Q F W+ + N ++ + + + VVV P Y+
Sbjct: 239 RNDPMLLYNKMTLAQIQNNFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYL 298
Query: 366 SKLEELLQTTPKKVQANYALWRATAASVSYLTEAIRNRQLQYSTALSGRTQMEPRWKECV 425
+KL+ +L + N WR VS L+ + + + AL G T W+ C
Sbjct: 299 TKLKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATWRRCA 358
Query: 426 DTVSSSISLAMGALYVRKFFKEDAKANAIEMVELIREEMNKILNTVEWMDNKTRRKALEK 485
+ V+ ++ A+G LYV F ++K +++ IRE + L+ + WMD +T+++A EK
Sbjct: 359 NYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKRAEEK 418
Query: 486 AKAMTAHIAYPDELL-DDNKISEFYDKLEIDPNNYYKSILNLTKFGTGYSFSLLRKPVNK 544
A A+ I YPD+++ +DNK++ Y +L + Y+++I+ KF LR+ V+K
Sbjct: 419 ALAIKERIGYPDDIVSNDNKLNNEYLELNYKEDEYFENIIQNLKFSQSKQLKKLREKVDK 478
Query: 545 TEWISHGHPALVNAFYSSIENSITFPAGILQGSFFSNDRPKYMNFGAIGFVIGHEITHGF 604
EWIS A+VNAFYSS N I FPAGILQ FFS + +N+G IG VIGHEITHGF
Sbjct: 479 DEWISGA--AVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEITHGF 536
Query: 605 DDQGRQFDKNGNLVDWWQEDTKRSYIEKARCIIEQYGNYSVPEV-NLTLNGVNNQGENIA 663
DD GR F+K+G+LVDWW + + ++ E+++C++ QYGN+S LNG+N GENIA
Sbjct: 537 DDNGRNFNKDGDLVDWWTQQSASNFKEQSQCMVYQYGNFSWDLAGGQHLNGINTLGENIA 596
Query: 664 DNGGMKEAYNAYVNWAATHPAEPRLPGLQNFTPQQMFWISAASTWCSKHRPETLKLRITT 723
DNGG+ +AY AY N+ + E LPGL + +Q+F+++ A WC +RPE I T
Sbjct: 597 DNGGLGQAYRAYQNYIKKNGEEKLLPGL-DLNHKQLFFLNFAQVWCGTYRPEYAVNSIKT 655
Query: 724 GFHSPGEFRVLGPVSNLESFSRDFQCPSGSRMNPVHKCKVW 764
HSPG FR++G + N FS F C S MNP KC+VW
Sbjct: 656 DVHSPGNFRIIGTLQNSAEFSEAFHCRKNSYMNPEKKCRVW 696
>pdb|3ZUK|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
pdb|3ZUK|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
Length = 699
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 194/711 (27%), Positives = 319/711 (44%), Gaps = 39/711 (5%)
Query: 66 LIGGSKVNQITNGDNKPKICFTEGCVHTASNLLKNMDLNVDPCDDFYRFSCGKFLKETQI 125
+ GG ++ + D+ FT + L ++D + P DD + G++L E +I
Sbjct: 15 MTGGQQMGRDLYDDDDKDHPFTMTLAIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEI 74
Query: 126 PDDKTAQTAFSVISDALEEQLRTIVEEPIRENEP--KPFKLVKNLYKACMNVKNIEILGL 183
P D+ AF + D E Q+R ++ + + + + +LY + ++ + +E G+
Sbjct: 75 PADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGV 134
Query: 184 EPMKRMLQDLGGWPVLEGQNWNEETFSWKDSVYKFHENGYSVDYFIDFSIVINVKNNSER 243
+P+ L + T G VD + K+++
Sbjct: 135 QPLHDELATIDSAADATELAAALGTLQ---RAGVGGGIGVYVD--------TDSKDSTRY 183
Query: 244 IIDLDQATLGLSREYLVKGINEKLVNAYYRYMID--IAVLLGADKDVATEELKESLEFEI 301
++ Q+ +GL E + V A Y I ++ G + + + E
Sbjct: 184 LVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALET 243
Query: 302 KLANISLPLEQRRNATKLYNPMSLDELQTKFPSIPWVEYLNTLLYPKDRLRETDIVVVDV 361
KLA+ + +RR+A YN + +LQT+ WV ++ L D + E +VV
Sbjct: 244 KLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTE---LVVRQ 300
Query: 362 PNYISKLEELLQTTPKKVQANYALWRATAASVSYLTEAIRNRQLQ-YSTALSGRTQMEPR 420
P+Y+ L + + +A WR A +LT A+ + Y L+G Q+ R
Sbjct: 301 PDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDR 360
Query: 421 WKECVDTVSSSISLAMGALYVRKFFKEDAKANAIEMVELIREEMNKILNTVEWMDNKTRR 480
WK V V + + A+G LYV++ F DAK+ +V+ ++E ++ ++WM +TR+
Sbjct: 361 WKRGVSLVENLMGDAVGKLYVQRHFPPDAKSRIDTLVDNLQEAYRISISELDWMTPQTRQ 420
Query: 481 KALEKAKAMTAHIAYPDELLDDNKISEFYDKLEIDPNNYYKSILNLTKFGTGYSFSLLRK 540
+AL K TA + YP + D Y KL ID ++ Y ++ + L
Sbjct: 421 RALAKLNKFTAKVGYPIKWRD-------YSKLAIDRDDLYGNVQRGYAVNHDRELAKLFG 473
Query: 541 PVNKTEWISHGHPALVNAFYSSIENSITFPAGILQGSFFSNDRPKYMNFGAIGFVIGHEI 600
PV++ EW P VNA+Y+ N I FPA ILQ FF + N+G IG VIGHEI
Sbjct: 474 PVDRDEWFMT--PQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEI 531
Query: 601 THGFDDQGRQFDKNGNLVDWWQEDTKRSYIEKARCIIEQYGNYSVPEV-----NLTLNGV 655
HGFDDQG ++D +GNLVDWW +D + + + + +IEQY Y+ ++ + G
Sbjct: 532 GHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGA 591
Query: 656 NNQGENIADNGGMKEAYNAYVNWAATHPAEPRLPGLQNFTPQQMFWISAASTWCSKHRPE 715
GENI D GG+ A AY +PA P + T Q + A W +K R
Sbjct: 592 FTIGENIGDLGGLSIALLAYQLSLNGNPA----PVIDGLTGMQRVFFGWAQIWRTKSRAA 647
Query: 716 TLKLRITTGFHSPGEFRVLGPVSNLESFSRDFQCPSGSR--MNPVHKCKVW 764
R+ HSP EFR G V N+++F + F ++P + ++W
Sbjct: 648 EAIRRLAVDPHSPPEFRCNGVVRNVDAFYQAFDVTEDDALFLDPQRRVRIW 698
>pdb|4H0Q|A Chain A, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
pdb|4H0Q|B Chain B, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
Length = 121
Score = 32.3 bits (72), Expect = 0.94, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 16/90 (17%)
Query: 79 DNKPKICFTEGCVHTASNLLKNMDLNVDPCDDFYRFSC--GKFLKETQIP-------DDK 129
D + CF C + N DP +DFYR+S G + E P DK
Sbjct: 38 DATDRCCFVHDCCYGKVN-------GCDPKEDFYRYSSNNGDIVCEANNPCTKEICECDK 90
Query: 130 TAQTAFSVISDALEEQLRTIVEEPIRENEP 159
A F D + + I E +E+EP
Sbjct: 91 AAAICFRDNKDTYDNKYWNIPMESCQESEP 120
>pdb|1WC2|A Chain A, Beta-1,4-D-Endoglucanase Cel45a From Blue Mussel Mytilus
Edulis At 1.2a
Length = 181
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 698 QMFWISAASTWCSKHRPETLKLRITTGFHSPGEFRVLGPVSNLESFSRDFQ----CPS 751
QM++ S WC +H + +KL TTG + PG+ GPV E S+ F CP+
Sbjct: 54 QMYFDSGNKGWCGQHCGQCIKL-TTTGGYVPGQG---GPVR--EGLSKTFMITNLCPN 105
>pdb|2IA0|A Chain A, Transcriptional Regulatory Protein Pf0864 From Pyrococcus
Furiosus A Member Of The Asnc Family (Pf0864)
pdb|2IA0|B Chain B, Transcriptional Regulatory Protein Pf0864 From Pyrococcus
Furiosus A Member Of The Asnc Family (Pf0864)
Length = 171
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 352 RETDIVVVDVPNYISKLEELLQTTPKKVQANYALWRATAASVSYLTEAIRNRQLQYSTAL 411
++ + + ++ + K E + KK+Q + R T L E ++ + L
Sbjct: 28 KDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTII----LGEQLKPKHLALIVLE 83
Query: 412 SGRTQMEPRWKECVDTVSSSISLAMGALYVRKFFKED-----AKANAIEMVELIREEMNK 466
G+ +E + + +SS++S G L+V K ++ K N E+V+ I E +
Sbjct: 84 VGKPVIEDFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNNKDELVKFIEENITS 143
Query: 467 ILN 469
I N
Sbjct: 144 IPN 146
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,992,265
Number of Sequences: 62578
Number of extensions: 1063390
Number of successful extensions: 2528
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2498
Number of HSP's gapped (non-prelim): 10
length of query: 764
length of database: 14,973,337
effective HSP length: 106
effective length of query: 658
effective length of database: 8,340,069
effective search space: 5487765402
effective search space used: 5487765402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)