Query psy1980
Match_columns 100
No_of_seqs 90 out of 107
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 21:09:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1980.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1980hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nkpb_ a.38.1.1 (B:) Max prot 74.5 5.8 0.00042 22.9 6.4 39 53-91 43-81 (83)
2 d1nkpa_ a.38.1.1 (A:) Myc prot 71.1 6.6 0.00048 22.9 5.8 39 52-90 47-85 (88)
3 d1nlwa_ a.38.1.1 (A:) Mad prot 58.4 13 0.00096 21.0 6.0 39 50-88 40-78 (79)
4 d1s35a2 a.7.1.1 (A:1169-1273) 51.3 15 0.0011 20.8 4.9 48 41-88 49-96 (105)
5 d1wa8b1 a.25.3.1 (B:602-695) E 48.1 15 0.0011 21.2 4.4 32 59-90 7-38 (94)
6 d1fxkc_ a.2.5.1 (C:) Prefoldin 38.5 23 0.0017 21.4 4.4 15 65-79 16-30 (133)
7 d1u5pa2 a.7.1.1 (A:1772-1872) 38.0 18 0.0013 20.1 3.6 50 39-88 45-94 (101)
8 d1dpsa_ a.25.1.1 (A:) Dodecame 35.0 22 0.0016 22.3 3.9 28 50-77 53-80 (159)
9 d2yw6a1 a.25.1.1 (A:17-157) Do 33.7 20 0.0015 21.8 3.5 27 50-76 33-59 (141)
10 d1wa8a1 a.25.3.1 (A:1-99) ESAT 33.6 34 0.0025 19.4 4.4 26 44-69 13-38 (99)
11 d1vcta1 a.7.12.1 (A:9-107) Hyp 31.7 42 0.0031 19.1 5.8 48 41-88 6-54 (99)
12 d1quua1 a.7.1.1 (A:1-124) alph 30.3 46 0.0034 19.1 5.0 49 40-88 63-111 (124)
13 d2bk6a1 a.25.1.1 (A:7-156) Dod 30.1 30 0.0022 21.1 3.9 28 50-77 35-62 (150)
14 d1jiga_ a.25.1.1 (A:) Dodecame 28.9 33 0.0024 20.8 3.9 28 50-77 38-65 (146)
15 d1n1qa_ a.25.1.1 (A:) Dodecame 28.4 34 0.0025 20.9 3.9 27 50-76 41-67 (149)
16 d1ji4a_ a.25.1.1 (A:) Dodecame 27.6 36 0.0026 20.7 3.9 28 50-77 35-62 (144)
17 d2fjca1 a.25.1.1 (A:27-177) Do 27.3 36 0.0026 20.7 3.9 27 51-77 42-68 (151)
18 d1ji5a_ a.25.1.1 (A:) Dodecame 27.2 37 0.0027 20.5 3.9 28 50-77 34-61 (142)
19 d1wrda1 a.7.8.1 (A:215-307) Ta 24.5 63 0.0046 18.7 5.3 46 30-75 7-56 (93)
20 d1umna_ a.25.1.1 (A:) Dodecame 24.3 44 0.0032 20.3 3.9 29 50-78 36-64 (151)
21 d1tzyb_ a.22.1.1 (B:) Histone 24.2 46 0.0034 19.9 3.9 23 51-73 30-52 (92)
22 d1r8da_ a.6.1.3 (A:) Multidrug 23.8 55 0.004 18.9 4.2 27 65-91 83-109 (109)
23 d1tjoa_ a.25.1.1 (A:) Dodecame 23.3 45 0.0033 21.1 3.9 24 54-77 65-88 (180)
24 d1cuna2 a.7.1.1 (A:116-219) Sp 23.0 60 0.0044 17.9 5.3 48 41-88 46-93 (104)
25 d1fxka_ a.2.5.1 (A:) Prefoldin 22.8 71 0.0051 18.7 5.1 30 58-87 66-95 (107)
26 d1grja1 a.2.1.1 (A:2-79) GreA 21.9 59 0.0043 18.7 3.9 43 39-83 29-71 (78)
27 d1sdia_ a.198.1.1 (A:) Hypothe 20.6 71 0.0052 21.7 4.7 58 39-97 64-130 (213)
No 1
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.50 E-value=5.8 Score=22.92 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q psy1980 53 SVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFD 91 (100)
Q Consensus 53 ~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~lD 91 (100)
..|-+....|..+...+......|+.+.+.|+..+.+|.
T Consensus 43 ~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 81 (83)
T d1nkpb_ 43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345566667777777777778888888888888877764
No 2
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.07 E-value=6.6 Score=22.91 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1980 52 VSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEF 90 (100)
Q Consensus 52 s~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~l 90 (100)
-..|.+-...|..+...+......|+.+.+.|...+.+|
T Consensus 47 L~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 47 LKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566666666666666666666666666666666554
No 3
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.39 E-value=13 Score=21.04 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
++...|.+-...|..+...+......|+.+...|..++.
T Consensus 40 ~iL~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~ 78 (79)
T d1nlwa_ 40 SLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLE 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344567777778888887877778888888877777664
No 4
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.29 E-value=15 Score=20.79 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=33.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 41 LCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 41 L~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
|.+.--.+.+|...|+.|-.+=+.+...|..|...|..|-+.|...+.
T Consensus 49 l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~l~~rw~~l~~~~~ 96 (105)
T d1s35a2 49 MENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQ 96 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 444445566777777777766666777788888888888777776654
No 5
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=48.10 E-value=15 Score=21.21 Aligned_cols=32 Identities=6% Similarity=0.178 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1980 59 FKQLNEELVAVSEKTDALKARMARLNAHTEEF 90 (100)
Q Consensus 59 F~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~l 90 (100)
|+.|..=+..+....+.|+..++.|+..+..|
T Consensus 7 ~~~l~~~a~~i~~~~~~i~~~l~~L~~~~~~l 38 (94)
T d1wa8b1 7 FAGIEAAASAIQGNVTSIHSLLDEGKQSLTKL 38 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444555555555555444443
No 6
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=38.54 E-value=23 Score=21.44 Aligned_cols=15 Identities=13% Similarity=0.403 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q psy1980 65 ELVAVSEKTDALKAR 79 (100)
Q Consensus 65 e~~~~~~R~~~L~~R 79 (100)
++..+..+...|+..
T Consensus 16 ~l~~l~~~i~~l~~~ 30 (133)
T d1fxkc_ 16 QVELIQQQMEAVRAT 30 (133)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 7
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=38.04 E-value=18 Score=20.15 Aligned_cols=50 Identities=6% Similarity=0.048 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 39 NTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 39 ~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
..+.+.=..+.+|...|+++-.+=+.+...|..|...|+.|-..|...+.
T Consensus 45 ~~i~~~~~~~~~l~~~~~~l~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~ 94 (101)
T d1u5pa2 45 AELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAA 94 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556677777777777777666667777788888888777776554
No 8
>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}
Probab=35.05 E-value=22 Score=22.35 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
++-++=++++.++...+..+++|...|.
T Consensus 53 ~lH~~fee~y~e~~~~~D~iAERI~~Lg 80 (159)
T d1dpsa_ 53 AVHEMLDGFRTALIDHLDTMAERAVQLG 80 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444556777777777777777776654
No 9
>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}
Probab=33.71 E-value=20 Score=21.80 Aligned_cols=27 Identities=15% Similarity=0.113 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDAL 76 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L 76 (100)
.+-++=++++.++...+..+++|.-.|
T Consensus 33 ~~H~~fee~y~~~~~~~D~iAERi~~L 59 (141)
T d2yw6a1 33 GVHEMIDPQVELVRGYADEVAERIATL 59 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344455666666667777777776655
No 10
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.55 E-value=34 Score=19.39 Aligned_cols=26 Identities=4% Similarity=-0.033 Sum_probs=12.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy1980 44 CLKQLGSVVSVAGDIFKQLNEELVAV 69 (100)
Q Consensus 44 ilRQL~sLs~~AediF~eL~~e~~~~ 69 (100)
...++...+..-++++.+|...+..+
T Consensus 13 ~A~~~~~~~~~l~~~l~~l~~~v~~l 38 (99)
T d1wa8a1 13 EAGNFERISGDLKTQIDQVESTAGSL 38 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555555555544443
No 11
>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=31.65 E-value=42 Score=19.07 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=29.7
Q ss_pred HHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 41 LCNCLKQLGSVVS-VAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 41 L~nilRQL~sLs~-~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
+-..|.++++++. --.+.|..+.+.=..++.++......||.+...+.
T Consensus 6 i~~~l~~M~~~~~~ml~~a~~a~~~~D~~~A~~v~~~d~~ID~l~~~i~ 54 (99)
T d1vcta1 6 VKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQLM 54 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhHHHHHHHHHHH
Confidence 3445666666653 33444555555556677777777777777776654
No 12
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.33 E-value=46 Score=19.07 Aligned_cols=49 Identities=14% Similarity=0.250 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 40 TLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 40 tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
.+.+.=.++..|..-|+.+...-+.+...+..|...|..|-+.|...+.
T Consensus 63 ~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rW~~L~~~~~ 111 (124)
T d1quua1 63 DLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQ 111 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445556666666666666666677777777777777777766554
No 13
>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}
Probab=30.10 E-value=30 Score=21.07 Aligned_cols=28 Identities=18% Similarity=0.368 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
+|-++-++++.++...+..+++|.-.|.
T Consensus 35 ~lH~~~e~~y~~~~~~~D~iAERi~~Lg 62 (150)
T d2bk6a1 35 TLHEKMDDLYSEFGEQMDEVAERLLAIG 62 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4455667777777777777777776654
No 14
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=28.88 E-value=33 Score=20.79 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
++-+.=++++.++...+..+++|.-.|.
T Consensus 38 ~lH~~~~e~~~~~~~~~D~iAERi~~lg 65 (146)
T d1jiga_ 38 TLHEKFEEFYNEAGTYIDELAERILALE 65 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4445556777777777777777776664
No 15
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=28.35 E-value=34 Score=20.86 Aligned_cols=27 Identities=4% Similarity=0.224 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDAL 76 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L 76 (100)
++-+.=++++.++...+..+++|.-.|
T Consensus 41 ~lH~~~ee~y~e~~~~~D~iAERi~~L 67 (149)
T d1n1qa_ 41 TLHEKFEELYTEASGHIDTLAERVLSI 67 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344445556666666666666665554
No 16
>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}
Probab=27.62 E-value=36 Score=20.67 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
++-..=++++.++...+..+++|...|-
T Consensus 35 ~lH~~f~e~y~~~~~~~D~iAERi~~LG 62 (144)
T d1ji4a_ 35 NVHKATEEIYEEFADMFDDLAERIVQLG 62 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4555667777777788888888877764
No 17
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=27.27 E-value=36 Score=20.70 Aligned_cols=27 Identities=15% Similarity=0.255 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 51 VVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 51 Ls~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
+-++=++++.++...+..+++|.-.|.
T Consensus 42 lH~~f~~~y~~~~~~~D~iAERi~~Lg 68 (151)
T d2fjca1 42 VHELLEEYYVSVTEAFDTIAERLLQLG 68 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334445555566666666666665554
No 18
>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}
Probab=27.20 E-value=37 Score=20.49 Aligned_cols=28 Identities=7% Similarity=0.203 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
++-+.=++++.++...+..+++|...|-
T Consensus 34 ~~H~~~~e~y~~~~~~~D~lAERi~~Lg 61 (142)
T d1ji5a_ 34 TLHEKFEELYTESATHIDEIAERILAIG 61 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4455566777777777777777776654
No 19
>d1wrda1 a.7.8.1 (A:215-307) Target of Myb protein 1, TOM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.47 E-value=63 Score=18.70 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=25.5
Q ss_pred cchHHHHHHHH--HHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 30 EGELDAVINNT--LCNCLKQLG--SVVSVAGDIFKQLNEELVAVSEKTDA 75 (100)
Q Consensus 30 ~~eLe~Vtn~t--L~nilRQL~--sLs~~AediF~eL~~e~~~~~~R~~~ 75 (100)
.+||+-|.|++ |+..|.++- +-...-.++..||+..+.....|.-.
T Consensus 7 ~~eLe~v~~n~~lL~eML~~~~p~~~~~~d~eli~eL~~~C~~~q~~i~~ 56 (93)
T d1wrda1 7 RSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLE 56 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 46888887764 555555542 22222246666666665555544433
No 20
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=24.27 E-value=44 Score=20.30 Aligned_cols=29 Identities=14% Similarity=0.115 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 50 SVVSVAGDIFKQLNEELVAVSEKTDALKA 78 (100)
Q Consensus 50 sLs~~AediF~eL~~e~~~~~~R~~~L~~ 78 (100)
++-++=++++.++...+..+++|...|-.
T Consensus 36 ~lH~~f~~~~~e~~~~~D~lAERi~~lGg 64 (151)
T d1umna_ 36 IWHPKMDEYMEEIDGYLDEMSERLITLGG 64 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45556666777777777777777666543
No 21
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=24.18 E-value=46 Score=19.92 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 51 VVSVAGDIFKQLNEELVAVSEKT 73 (100)
Q Consensus 51 Ls~~AediF~eL~~e~~~~~~R~ 73 (100)
+..+-.|||+-|..|+..+++-.
T Consensus 30 mnsfvndiferIa~EA~~La~~~ 52 (92)
T d1tzyb_ 30 MNSFVNDIFERIAGEASRLAHYN 52 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 45567899999999999888653
No 22
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=23.77 E-value=55 Score=18.86 Aligned_cols=27 Identities=7% Similarity=0.136 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcC
Q psy1980 65 ELVAVSEKTDALKARMARLNAHTEEFD 91 (100)
Q Consensus 65 e~~~~~~R~~~L~~Ri~rL~~~v~~lD 91 (100)
....+..+...|++.+..|+..+..+|
T Consensus 83 ~~~~l~~~~~~l~~~~~~l~~~l~~ie 109 (109)
T d1r8da_ 83 QKEILMKKKQRMDEMIQTIDRTLLSVD 109 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 344456666677777777777766654
No 23
>d1tjoa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=23.28 E-value=45 Score=21.09 Aligned_cols=24 Identities=21% Similarity=0.266 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 54 VAGDIFKQLNEELVAVSEKTDALK 77 (100)
Q Consensus 54 ~AediF~eL~~e~~~~~~R~~~L~ 77 (100)
+=++++.++...+..+++|...|-
T Consensus 65 ~fee~y~~~~~~~D~iAERI~~LG 88 (180)
T d1tjoa_ 65 FLGEAAETAEEVADELAERVQALG 88 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 334555555555566666665553
No 24
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.00 E-value=60 Score=17.93 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=30.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980 41 LCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE 88 (100)
Q Consensus 41 L~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~ 88 (100)
+.+-=..+..|...|+.+-..=+.+...|..|...|+.+-+.|...+.
T Consensus 46 i~~~~~~~~~l~~~g~~L~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~ 93 (104)
T d1cuna2 46 FTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAA 93 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555666666666666555666777777777777777666543
No 25
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.78 E-value=71 Score=18.65 Aligned_cols=30 Identities=13% Similarity=0.276 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1980 58 IFKQLNEELVAVSEKTDALKARMARLNAHT 87 (100)
Q Consensus 58 iF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v 87 (100)
+-.+|...+..+..+..+|...+..++.++
T Consensus 66 ~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l 95 (107)
T d1fxka_ 66 LTEELQEKLETLQLREKTIERQEERVMKKL 95 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444443
No 26
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.95 E-value=59 Score=18.70 Aligned_cols=43 Identities=9% Similarity=0.132 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980 39 NTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARL 83 (100)
Q Consensus 39 ~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL 83 (100)
..-....|.+|||+.-|+ |+.=-.+...+-.|...|+.++.+.
T Consensus 29 ~~~I~~Ar~~GDlsENae--Y~aAKe~q~~~e~RI~eLe~~L~~a 71 (78)
T d1grja1 29 IAAIAEAREHGDLKENAE--YHAAREQQGFCEGRIKDIEAKLSNA 71 (78)
T ss_dssp HHHHHHHHTTCCGGGCHH--HHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHcCChhhhHH--HHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 334456678899998877 4444455555555666665555543
No 27
>d1sdia_ a.198.1.1 (A:) Hypothetical protein YcfC {Escherichia coli [TaxId: 562]}
Probab=20.63 E-value=71 Score=21.68 Aligned_cols=58 Identities=22% Similarity=0.254 Sum_probs=45.0
Q ss_pred HHHHHHHHHHh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCceeee
Q psy1980 39 NTLCNCLKQLG---------SVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97 (100)
Q Consensus 39 ~tL~nilRQL~---------sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~lD~k~~~V 97 (100)
.+|-.+..||+ .+.+|+-.|.. |+.-++.-..-.+.|..||++++.....+|+.-+.|
T Consensus 64 ~Gl~~L~~~L~~~~~~~~~~e~~RY~~sl~~-LerkL~k~~~~l~~l~~ri~~~~~q~~~f~~~~~~v 130 (213)
T d1sdia_ 64 VGLETLLGVLNASSRQGLNAELTRYTLSLMV-LERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETL 130 (213)
T ss_dssp HHHHHHHHHHHCCCSSSHHHHHHHHHHHHHH-HHHHHHHSTTHHHHHHHHHHTTHHHHTTSCTTSHHH
T ss_pred HHHHHHHHHhcCCCcccccHHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHhcCcccHHH
Confidence 45566666773 36788888764 788888888888999999999999999988776543
Done!