Query psy1990
Match_columns 382
No_of_seqs 161 out of 1344
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 21:23:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yrq_A High mobility group pro 99.8 6.1E-20 2.1E-24 160.7 8.7 95 1-95 48-172 (173)
2 2gzk_A Sex-determining region 99.8 6.7E-20 2.3E-24 158.0 7.2 94 1-94 35-158 (159)
3 3tmm_A Transcription factor A, 99.8 2.3E-18 7.9E-23 159.4 10.3 96 1-96 72-214 (238)
4 3tq6_A Transcription factor A, 99.7 2.5E-18 8.6E-23 157.0 10.0 96 1-96 40-182 (214)
5 2crj_A SWI/SNF-related matrix- 99.3 7.1E-13 2.4E-17 106.0 3.9 57 47-103 30-86 (92)
6 1v63_A Nucleolar transcription 99.2 3E-11 1E-15 99.0 8.0 50 49-98 31-80 (101)
7 1l8y_A Upstream binding factor 99.2 1.4E-11 4.9E-16 101.0 5.3 50 47-97 27-76 (91)
8 1hme_A High mobility group pro 99.2 1.5E-11 5.2E-16 94.4 3.9 48 47-94 29-76 (77)
9 2co9_A Thymus high mobility gr 99.2 3.5E-11 1.2E-15 98.1 6.0 53 47-99 40-92 (102)
10 2cs1_A PMS1 protein homolog 1; 99.1 1.9E-11 6.6E-16 97.6 4.2 49 47-95 30-78 (92)
11 1ckt_A High mobility group 1 p 99.1 2.3E-11 8E-16 91.8 3.9 46 47-92 24-71 (71)
12 2lef_A LEF-1 HMG, protein (lym 99.1 5.7E-12 2E-16 99.2 0.0 53 47-99 25-77 (86)
13 3nm9_A HMG-D, high mobility gr 99.1 5.2E-11 1.8E-15 91.1 5.2 47 47-95 26-72 (73)
14 1k99_A Upstream binding factor 99.1 3.6E-11 1.2E-15 97.9 4.2 49 47-95 33-81 (99)
15 2eqz_A High mobility group pro 99.1 7.1E-11 2.4E-15 93.1 5.7 47 47-93 38-86 (86)
16 4a3n_A Transcription factor SO 99.1 2.3E-11 7.8E-16 91.5 2.4 47 47-93 25-71 (71)
17 1gt0_D Transcription factor SO 99.1 3.9E-11 1.3E-15 92.9 3.4 49 47-95 25-73 (80)
18 3fgh_A Transcription factor A, 99.1 1E-10 3.4E-15 88.0 5.6 51 42-92 8-66 (67)
19 1v64_A Nucleolar transcription 99.1 2.2E-10 7.7E-15 94.9 7.5 55 42-96 23-85 (108)
20 1cg7_A Protein (NON histone pr 99.1 3.7E-11 1.3E-15 96.3 2.5 50 47-96 43-92 (93)
21 1wxl_A Single-strand recogniti 99.0 9.2E-11 3.2E-15 89.7 3.6 47 47-95 26-72 (73)
22 1j46_A SRY, sex-determining re 99.0 8.3E-11 2.8E-15 92.5 3.4 49 47-95 27-75 (85)
23 2lhj_A High mobility group pro 99.0 8.5E-11 2.9E-15 94.7 3.4 49 47-95 45-95 (97)
24 1hry_A Human SRY; DNA, DNA-bin 99.0 4.3E-11 1.5E-15 91.6 1.5 47 47-93 27-73 (76)
25 3u2b_C Transcription factor SO 99.0 7.3E-11 2.5E-15 90.8 2.4 48 47-94 25-72 (79)
26 3f27_D Transcription factor SO 99.0 7.7E-11 2.6E-15 91.6 2.5 49 47-95 29-77 (83)
27 1aab_A High mobility group pro 99.0 4.7E-11 1.6E-15 93.2 1.2 49 47-95 30-80 (83)
28 1wz6_A HMG-box transcription f 99.0 4.1E-11 1.4E-15 93.4 -0.4 49 47-95 30-78 (82)
29 4euw_A Transcription factor SO 99.0 2E-10 6.8E-15 94.5 3.6 48 47-94 52-99 (106)
30 1i11_A Transcription factor SO 99.0 1.6E-10 5.5E-15 89.8 2.7 47 47-93 27-73 (81)
31 2e6o_A HMG box-containing prot 99.0 1.5E-10 5.3E-15 91.5 2.2 47 47-93 40-86 (87)
32 1wgf_A Upstream binding factor 98.8 2E-10 6.8E-15 91.6 -1.7 45 47-91 43-87 (90)
33 3tq6_A Transcription factor A, 98.7 7.9E-09 2.7E-13 94.3 5.5 50 47-96 32-81 (214)
34 3tmm_A Transcription factor A, 98.7 8.5E-09 2.9E-13 95.4 5.4 50 47-96 64-113 (238)
35 2yrq_A High mobility group pro 98.7 1.1E-08 3.7E-13 89.5 3.9 50 47-96 38-89 (173)
36 1l8y_A Upstream binding factor 98.7 1.3E-08 4.5E-13 83.5 3.9 41 1-41 34-74 (91)
37 3fgh_A Transcription factor A, 98.6 1.8E-08 6.1E-13 75.6 4.2 38 1-38 29-66 (67)
38 1ckt_A High mobility group 1 p 98.6 1.8E-08 6E-13 76.0 2.8 38 1-38 34-71 (71)
39 2cto_A Novel protein; high mob 98.6 8E-09 2.7E-13 84.5 0.7 48 42-89 16-76 (93)
40 2eqz_A High mobility group pro 98.6 4.2E-08 1.4E-12 77.2 4.3 39 1-39 48-86 (86)
41 1aab_A High mobility group pro 98.5 4.1E-08 1.4E-12 76.5 3.9 41 1-41 40-80 (83)
42 2crj_A SWI/SNF-related matrix- 98.5 4.1E-08 1.4E-12 78.3 3.7 47 1-47 38-84 (92)
43 1v63_A Nucleolar transcription 98.5 5.9E-08 2E-12 79.4 4.2 40 1-40 37-76 (101)
44 2cs1_A PMS1 protein homolog 1; 98.5 6.3E-08 2.2E-12 77.2 3.4 41 1-41 38-78 (92)
45 1hme_A High mobility group pro 98.4 7.3E-08 2.5E-12 73.8 2.9 40 1-40 37-76 (77)
46 2gzk_A Sex-determining region 98.4 4.9E-08 1.7E-12 83.9 1.6 49 47-95 27-75 (159)
47 2d7l_A WD repeat and HMG-box D 98.4 8.5E-08 2.9E-12 76.1 1.8 35 47-81 28-63 (81)
48 1k99_A Upstream binding factor 98.4 1.4E-07 5E-12 76.6 3.2 41 1-41 41-81 (99)
49 1gt0_D Transcription factor SO 98.4 1.5E-07 5.2E-12 72.7 3.1 39 1-39 33-71 (80)
50 1hry_A Human SRY; DNA, DNA-bin 98.4 1.4E-07 4.8E-12 72.0 2.8 39 1-39 35-73 (76)
51 4a3n_A Transcription factor SO 98.3 8.7E-08 3E-12 71.8 1.2 39 1-39 33-71 (71)
52 2co9_A Thymus high mobility gr 98.3 3E-07 1E-11 74.8 4.3 40 1-40 48-87 (102)
53 1v64_A Nucleolar transcription 98.3 2.5E-07 8.5E-12 76.6 3.5 40 1-40 44-83 (108)
54 2lef_A LEF-1 HMG, protein (lym 98.3 3.4E-07 1.2E-11 71.8 3.2 39 1-39 33-71 (86)
55 1j46_A SRY, sex-determining re 98.3 3.5E-07 1.2E-11 71.8 3.1 39 1-39 35-73 (85)
56 3f27_D Transcription factor SO 98.3 2.9E-07 9.8E-12 71.4 2.4 39 1-39 37-75 (83)
57 1wz6_A HMG-box transcription f 98.3 1.4E-07 4.7E-12 73.3 0.5 39 1-39 38-76 (82)
58 1cg7_A Protein (NON histone pr 98.2 2.4E-07 8.1E-12 74.1 1.6 40 1-40 51-90 (93)
59 3u2b_C Transcription factor SO 98.2 3.1E-07 1.1E-11 70.4 2.2 39 1-39 33-71 (79)
60 4euw_A Transcription factor SO 98.2 5.1E-07 1.7E-11 74.2 3.1 39 1-39 60-98 (106)
61 3nm9_A HMG-D, high mobility gr 98.2 4.4E-07 1.5E-11 69.2 2.5 38 1-40 34-71 (73)
62 1wxl_A Single-strand recogniti 98.2 4.8E-07 1.6E-11 69.0 2.2 38 1-40 34-71 (73)
63 2lhj_A High mobility group pro 98.2 2.1E-07 7.2E-12 74.8 0.1 40 1-40 55-94 (97)
64 2e6o_A HMG box-containing prot 98.1 6.5E-07 2.2E-11 70.6 2.0 39 1-39 48-86 (87)
65 1i11_A Transcription factor SO 98.1 6.9E-07 2.4E-11 69.2 1.3 39 1-39 35-73 (81)
66 2yuk_A Myeloid/lymphoid or mix 98.0 1.8E-06 6.3E-11 70.5 2.9 38 47-88 45-84 (90)
67 1wgf_A Upstream binding factor 98.0 3.8E-07 1.3E-11 72.5 -2.3 38 1-38 51-88 (90)
68 2cto_A Novel protein; high mob 97.8 4.1E-06 1.4E-10 68.4 1.7 37 1-37 39-78 (93)
69 2d7l_A WD repeat and HMG-box D 97.2 8.1E-05 2.8E-09 58.9 1.0 28 1-28 37-64 (81)
70 2yuk_A Myeloid/lymphoid or mix 96.7 0.001 3.5E-08 54.2 3.4 32 3-34 53-84 (90)
71 1zu1_A DSRBP-ZFA, RNA binding 96.4 0.00069 2.3E-08 57.2 0.5 36 161-196 89-124 (127)
72 1zr9_A Zinc finger protein 593 95.7 0.003 1E-07 54.4 1.6 44 156-199 41-84 (124)
73 1zu1_A DSRBP-ZFA, RNA binding 94.2 0.0065 2.2E-07 51.2 -0.6 41 157-197 24-64 (127)
74 3cw1_L U1 small nuclear ribonu 93.2 0.017 5.8E-07 46.3 0.1 33 166-198 4-38 (77)
75 4dgw_A PRE-mRNA-splicing facto 88.5 0.28 9.7E-06 49.3 3.7 34 163-196 290-323 (402)
76 2lvu_A Zinc finger and BTB dom 86.5 0.13 4.6E-06 29.4 0.0 20 167-186 4-23 (26)
77 2lvt_A Zinc finger and BTB dom 84.0 0.22 7.6E-06 28.9 0.0 21 166-186 3-23 (29)
78 1ard_A Yeast transcription fac 83.1 0.17 5.9E-06 29.1 -0.6 20 167-186 4-23 (29)
79 2kfq_A FP1; protein, de novo p 82.4 0.2 6.8E-06 30.6 -0.5 20 167-186 4-23 (32)
80 2kvf_A Zinc finger and BTB dom 82.2 0.15 5E-06 29.5 -1.2 20 167-186 5-24 (28)
81 2kvg_A Zinc finger and BTB dom 81.9 0.19 6.5E-06 29.3 -0.7 20 167-186 5-24 (27)
82 2yrk_A Zinc finger homeobox pr 81.6 0.3 1E-05 37.1 0.1 32 167-198 15-46 (55)
83 2lvr_A Zinc finger and BTB dom 82.1 0.3 1E-05 28.2 0.0 21 166-186 4-24 (30)
84 2m0f_A Zinc finger and BTB dom 80.7 0.22 7.5E-06 28.5 -0.8 20 167-186 4-23 (29)
85 1znf_A 31ST zinc finger from X 80.3 0.22 7.4E-06 28.4 -0.9 20 167-186 3-22 (27)
86 2elo_A Zinc finger protein 406 80.0 0.26 8.7E-06 30.4 -0.7 21 166-186 10-30 (37)
87 2elx_A Zinc finger protein 406 79.2 0.22 7.5E-06 30.1 -1.1 21 166-186 8-28 (35)
88 2m0d_A Zinc finger and BTB dom 79.1 0.26 8.9E-06 28.3 -0.8 20 167-186 5-24 (30)
89 2kvh_A Zinc finger and BTB dom 78.2 0.24 8.4E-06 28.5 -1.1 20 167-186 5-24 (27)
90 1rim_A E6APC2 peptide; E6-bind 77.7 0.28 9.5E-06 30.2 -1.0 20 167-186 4-23 (33)
91 1rik_A E6APC1 peptide; E6-bind 77.2 0.27 9.2E-06 28.4 -1.1 20 167-186 4-23 (29)
92 1srk_A Zinc finger protein ZFP 77.0 0.28 9.6E-06 29.9 -1.1 21 166-186 8-28 (35)
93 2els_A Zinc finger protein 406 76.9 0.34 1.2E-05 29.8 -0.8 21 166-186 10-30 (36)
94 2elq_A Zinc finger protein 406 76.8 0.29 9.9E-06 30.1 -1.1 21 166-186 10-30 (36)
95 2elr_A Zinc finger protein 406 76.7 0.37 1.3E-05 29.3 -0.6 21 166-186 10-30 (36)
96 2elt_A Zinc finger protein 406 76.3 0.31 1E-05 29.8 -1.1 21 166-186 10-30 (36)
97 1njq_A Superman protein; zinc- 76.3 0.36 1.2E-05 30.4 -0.8 21 166-186 7-27 (39)
98 2elv_A Zinc finger protein 406 75.9 0.32 1.1E-05 29.9 -1.1 21 166-186 10-30 (36)
99 2m0e_A Zinc finger and BTB dom 75.8 0.34 1.2E-05 27.5 -0.9 20 167-186 4-23 (29)
100 1fv5_A First zinc finger of U- 74.9 0.44 1.5E-05 31.9 -0.7 20 166-185 9-28 (36)
101 2elp_A Zinc finger protein 406 74.6 0.35 1.2E-05 29.9 -1.2 21 166-186 10-31 (37)
102 2ytb_A Zinc finger protein 32; 74.5 0.54 1.8E-05 29.7 -0.3 21 166-186 12-32 (42)
103 1p7a_A BF3, BKLF, kruppel-like 74.0 0.49 1.7E-05 29.1 -0.6 21 166-186 12-32 (37)
104 1klr_A Zinc finger Y-chromosom 73.8 0.39 1.3E-05 27.5 -1.0 20 167-186 4-23 (30)
105 1paa_A Yeast transcription fac 73.4 0.51 1.7E-05 27.3 -0.6 19 167-185 4-22 (30)
106 2epu_A Zinc finger protein 32; 72.0 0.56 1.9E-05 30.4 -0.7 21 166-186 13-33 (45)
107 2yte_A Zinc finger protein 473 72.0 0.58 2E-05 29.5 -0.6 21 166-186 11-31 (42)
108 2emg_A Zinc finger protein 484 71.9 0.59 2E-05 30.3 -0.6 21 166-186 13-33 (46)
109 2eq4_A Zinc finger protein 224 71.8 0.66 2.2E-05 30.0 -0.4 21 166-186 13-33 (46)
110 2en2_A B-cell lymphoma 6 prote 71.7 0.57 1.9E-05 29.7 -0.7 21 166-186 12-32 (42)
111 2enh_A Zinc finger protein 28 71.5 0.63 2.2E-05 30.3 -0.5 21 166-186 13-33 (46)
112 3iuf_A Zinc finger protein UBI 71.4 0.58 2E-05 31.4 -0.8 21 166-186 8-28 (48)
113 2eoj_A Zinc finger protein 268 71.3 0.61 2.1E-05 29.9 -0.7 21 166-186 13-33 (44)
114 2eox_A Zinc finger protein 473 71.2 0.59 2E-05 30.0 -0.7 21 166-186 13-33 (44)
115 2eou_A Zinc finger protein 473 71.1 0.62 2.1E-05 30.0 -0.7 21 166-186 13-33 (44)
116 2eof_A Zinc finger protein 268 70.7 0.6 2.1E-05 29.8 -0.8 21 166-186 13-33 (44)
117 1yui_A GAGA-factor; complex (D 70.5 0.62 2.1E-05 31.6 -0.8 21 166-186 25-45 (54)
118 2en7_A Zinc finger protein 268 70.4 0.65 2.2E-05 29.6 -0.7 21 166-186 13-33 (44)
119 2eon_A ZFP-95, zinc finger pro 70.4 0.58 2E-05 30.6 -0.9 21 166-186 13-33 (46)
120 2epc_A Zinc finger protein 32; 69.9 0.54 1.9E-05 29.7 -1.1 21 166-186 12-32 (42)
121 2eor_A Zinc finger protein 224 69.8 0.65 2.2E-05 30.0 -0.8 21 166-186 13-33 (46)
122 2eos_A B-cell lymphoma 6 prote 69.7 0.61 2.1E-05 29.7 -0.9 21 166-186 12-32 (42)
123 2epz_A Zinc finger protein 28 69.4 0.73 2.5E-05 29.9 -0.6 21 166-186 13-33 (46)
124 2en9_A Zinc finger protein 28 69.3 0.73 2.5E-05 30.0 -0.6 21 166-186 13-33 (46)
125 2eom_A ZFP-95, zinc finger pro 69.3 0.61 2.1E-05 30.5 -1.0 21 166-186 13-33 (46)
126 2yrm_A B-cell lymphoma 6 prote 69.0 0.63 2.2E-05 30.0 -1.0 21 166-186 11-31 (43)
127 2el5_A Zinc finger protein 268 69.0 0.58 2E-05 29.7 -1.1 21 166-186 11-31 (42)
128 2eq1_A Zinc finger protein 347 68.8 0.81 2.8E-05 29.6 -0.5 21 166-186 13-33 (46)
129 2emb_A Zinc finger protein 473 68.6 0.74 2.5E-05 29.5 -0.7 21 166-186 13-33 (44)
130 2enf_A Zinc finger protein 347 68.6 0.65 2.2E-05 30.1 -1.0 21 166-186 13-33 (46)
131 2ytf_A Zinc finger protein 268 68.4 0.61 2.1E-05 30.1 -1.1 21 166-186 13-33 (46)
132 2yrj_A Zinc finger protein 473 68.4 0.61 2.1E-05 30.1 -1.1 21 166-186 13-33 (46)
133 2ept_A Zinc finger protein 32; 68.3 0.64 2.2E-05 29.4 -1.0 21 166-186 11-31 (41)
134 2ep1_A Zinc finger protein 484 68.0 0.67 2.3E-05 29.9 -1.0 21 166-186 13-33 (46)
135 2eow_A Zinc finger protein 347 67.9 0.71 2.4E-05 29.8 -0.9 21 166-186 13-33 (46)
136 2yth_A Zinc finger protein 224 67.9 0.75 2.6E-05 29.9 -0.8 21 166-186 13-33 (46)
137 2emj_A Zinc finger protein 28 67.7 0.65 2.2E-05 30.2 -1.1 21 166-186 13-33 (46)
138 2ytm_A Zinc finger protein 28 67.6 0.92 3.1E-05 29.6 -0.4 21 166-186 13-33 (46)
139 2eq3_A Zinc finger protein 347 67.5 0.82 2.8E-05 29.5 -0.7 21 166-186 13-33 (46)
140 2eoy_A Zinc finger protein 473 67.4 0.66 2.2E-05 30.2 -1.2 21 166-186 13-33 (46)
141 2ytp_A Zinc finger protein 484 67.4 0.66 2.3E-05 30.2 -1.1 21 166-186 13-33 (46)
142 2em6_A Zinc finger protein 224 67.2 0.72 2.5E-05 30.0 -1.0 21 166-186 13-33 (46)
143 2eoh_A Zinc finger protein 28 67.2 0.71 2.4E-05 30.0 -1.0 21 166-186 13-33 (46)
144 2epv_A Zinc finger protein 268 67.0 0.68 2.3E-05 29.9 -1.1 21 166-186 13-33 (44)
145 2eoz_A Zinc finger protein 473 67.0 0.83 2.8E-05 29.7 -0.7 21 166-186 13-33 (46)
146 2emi_A Zinc finger protein 484 66.8 0.72 2.5E-05 29.9 -1.0 21 166-186 13-33 (46)
147 2eq2_A Zinc finger protein 347 66.8 0.75 2.6E-05 29.8 -1.0 21 166-186 13-33 (46)
148 2yti_A Zinc finger protein 347 66.6 0.74 2.5E-05 29.8 -1.0 21 166-186 13-33 (46)
149 2ytg_A ZFP-95, zinc finger pro 66.4 0.92 3.1E-05 29.4 -0.6 21 166-186 13-33 (46)
150 2emz_A ZFP-95, zinc finger pro 66.3 0.75 2.6E-05 29.9 -1.0 21 166-186 13-33 (46)
151 2ytr_A Zinc finger protein 347 66.3 0.9 3.1E-05 29.3 -0.7 21 166-186 13-33 (46)
152 2em4_A Zinc finger protein 28 66.2 0.72 2.5E-05 30.0 -1.1 21 166-186 13-33 (46)
153 2en3_A ZFP-95, zinc finger pro 66.0 0.73 2.5E-05 29.9 -1.2 21 166-186 13-33 (46)
154 2yts_A Zinc finger protein 484 65.8 0.77 2.6E-05 29.6 -1.0 21 166-186 13-33 (46)
155 2ysp_A Zinc finger protein 224 65.8 0.89 3.1E-05 29.4 -0.7 21 166-186 13-33 (46)
156 2eme_A Zinc finger protein 473 65.8 0.89 3E-05 29.3 -0.8 21 166-186 13-33 (46)
157 2em3_A Zinc finger protein 28 65.6 0.76 2.6E-05 29.8 -1.1 21 166-186 13-33 (46)
158 2emm_A ZFP-95, zinc finger pro 65.4 0.76 2.6E-05 29.7 -1.1 21 166-186 13-33 (46)
159 2ytn_A Zinc finger protein 347 65.2 1 3.5E-05 29.1 -0.5 21 166-186 13-33 (46)
160 2emx_A Zinc finger protein 268 65.2 0.78 2.7E-05 29.4 -1.1 21 166-186 11-31 (44)
161 2ep0_A Zinc finger protein 28 65.1 0.78 2.7E-05 29.7 -1.1 21 166-186 13-33 (46)
162 2ely_A Zinc finger protein 224 65.1 0.88 3E-05 29.6 -0.9 21 166-186 13-33 (46)
163 2emh_A Zinc finger protein 484 65.0 0.93 3.2E-05 29.3 -0.8 21 166-186 13-33 (46)
164 2yso_A ZFP-95, zinc finger pro 64.9 0.94 3.2E-05 29.3 -0.8 21 166-186 13-33 (46)
165 2eq0_A Zinc finger protein 347 64.9 0.94 3.2E-05 29.3 -0.8 21 166-186 13-33 (46)
166 2elm_A Zinc finger protein 406 64.8 0.75 2.6E-05 28.7 -1.2 19 166-184 10-28 (37)
167 2en1_A Zinc finger protein 224 64.8 1 3.5E-05 29.2 -0.6 21 166-186 13-33 (46)
168 2emf_A Zinc finger protein 484 64.8 0.87 3E-05 29.6 -1.0 21 166-186 13-33 (46)
169 1sp2_A SP1F2; zinc finger, tra 64.7 0.85 2.9E-05 26.9 -0.9 19 168-186 5-25 (31)
170 2em9_A Zinc finger protein 224 64.7 0.84 2.9E-05 29.5 -1.0 21 166-186 13-33 (46)
171 2en6_A Zinc finger protein 268 64.7 0.97 3.3E-05 29.2 -0.7 21 166-186 13-33 (46)
172 2em2_A Zinc finger protein 28 64.7 0.8 2.7E-05 29.8 -1.1 21 166-186 13-33 (46)
173 2yu5_A Zinc finger protein 473 64.6 0.81 2.8E-05 29.4 -1.1 21 166-186 13-33 (44)
174 2eoe_A Zinc finger protein 347 64.5 1 3.5E-05 29.0 -0.7 21 166-186 13-33 (46)
175 2ep3_A Zinc finger protein 484 64.5 0.82 2.8E-05 29.6 -1.1 21 166-186 13-33 (46)
176 2eop_A Zinc finger protein 268 64.4 1 3.6E-05 29.0 -0.6 21 166-186 13-33 (46)
177 2em8_A Zinc finger protein 224 64.2 0.83 2.8E-05 29.7 -1.1 21 166-186 13-33 (46)
178 4gzn_C ZFP-57, zinc finger pro 64.1 1.3 4.3E-05 32.4 -0.3 20 166-185 33-52 (60)
179 2emy_A Zinc finger protein 268 64.1 0.83 2.9E-05 29.6 -1.1 21 166-186 13-33 (46)
180 2em0_A Zinc finger protein 224 64.0 0.93 3.2E-05 29.3 -0.9 21 166-186 13-33 (46)
181 2em7_A Zinc finger protein 224 63.9 0.88 3E-05 29.5 -1.1 21 166-186 13-33 (46)
182 2elz_A Zinc finger protein 224 63.8 0.96 3.3E-05 29.4 -0.9 21 166-186 13-33 (46)
183 2ytj_A Zinc finger protein 484 63.7 0.86 2.9E-05 29.5 -1.1 21 166-186 13-33 (46)
184 2epr_A POZ-, at HOOK-, and zin 63.6 1.2 3.9E-05 29.4 -0.5 22 165-186 12-33 (48)
185 4f9c_B Protein DBF4 homolog A; 63.6 1.2 4.2E-05 38.8 -0.5 28 165-195 87-114 (144)
186 2lce_A B-cell lymphoma 6 prote 63.5 1.2 4E-05 31.8 -0.5 20 166-185 18-37 (74)
187 2epq_A POZ-, at HOOK-, and zin 63.3 1.1 3.7E-05 29.0 -0.7 21 166-186 11-31 (45)
188 2yto_A Zinc finger protein 484 63.2 0.89 3E-05 29.5 -1.1 21 166-186 13-33 (46)
189 2ytt_A Zinc finger protein 473 62.8 0.97 3.3E-05 29.4 -1.0 21 166-186 13-33 (46)
190 2ytq_A Zinc finger protein 268 62.6 0.99 3.4E-05 29.3 -1.0 21 166-186 13-33 (46)
191 2eoo_A ZFP-95, zinc finger pro 62.4 0.94 3.2E-05 29.4 -1.1 21 166-186 13-33 (46)
192 2en8_A Zinc finger protein 224 62.3 1.1 3.8E-05 28.8 -0.8 21 166-186 13-33 (46)
193 2ene_A Zinc finger protein 347 62.1 0.96 3.3E-05 29.3 -1.1 21 166-186 13-33 (46)
194 2el4_A Zinc finger protein 268 62.1 1 3.5E-05 29.0 -1.0 21 166-186 13-33 (46)
195 2em5_A ZFP-95, zinc finger pro 62.1 0.96 3.3E-05 29.4 -1.1 21 166-186 13-33 (46)
196 2eml_A Zinc finger protein 28 62.0 0.96 3.3E-05 29.3 -1.1 21 166-186 13-33 (46)
197 2eoq_A Zinc finger protein 224 62.0 1 3.5E-05 29.2 -1.0 21 166-186 13-33 (46)
198 2ep2_A Zinc finger protein 484 61.8 0.98 3.3E-05 29.2 -1.1 21 166-186 13-33 (46)
199 2eov_A Zinc finger protein 484 61.2 1.1 3.7E-05 28.9 -1.0 21 166-186 13-33 (46)
200 2epw_A Zinc finger protein 268 61.1 1 3.5E-05 29.1 -1.2 21 166-186 13-33 (46)
201 2epx_A Zinc finger protein 28 61.0 1.1 3.8E-05 28.9 -1.0 21 166-186 13-33 (47)
202 2yu8_A Zinc finger protein 347 60.4 1.1 3.7E-05 29.0 -1.1 21 166-186 13-33 (46)
203 2enc_A Zinc finger protein 224 60.2 1.1 3.7E-05 29.0 -1.1 21 166-186 13-33 (46)
204 1bhi_A CRE-BP1, ATF-2; CRE bin 60.2 1.4 4.8E-05 27.2 -0.6 24 166-191 7-32 (38)
205 1zfd_A SWI5; DNA binding motif 60.2 1.1 3.9E-05 26.4 -1.0 20 167-186 5-26 (32)
206 2emk_A Zinc finger protein 28 60.1 1.2 4E-05 29.0 -1.0 21 166-186 13-33 (46)
207 2ytk_A Zinc finger protein 347 60.0 1.1 3.8E-05 29.0 -1.1 21 166-186 13-33 (46)
208 2ema_A Zinc finger protein 347 59.9 1.1 3.8E-05 29.0 -1.1 21 166-186 13-33 (46)
209 2ab3_A ZNF29; zinc finger prot 59.7 1.1 3.8E-05 25.5 -1.1 20 167-186 4-25 (29)
210 2emp_A Zinc finger protein 347 59.6 1.1 3.8E-05 28.9 -1.2 21 166-186 13-33 (46)
211 3uk3_C Zinc finger protein 217 59.5 1.5 5E-05 29.4 -0.6 21 166-186 5-25 (57)
212 2el6_A Zinc finger protein 268 58.3 1.3 4.4E-05 28.7 -1.0 21 166-186 13-33 (46)
213 2epp_A POZ-, at HOOK-, and zin 57.5 1.6 5.6E-05 32.8 -0.7 24 166-191 14-37 (66)
214 2ytd_A Zinc finger protein 473 57.5 1.3 4.4E-05 28.6 -1.1 21 166-186 13-33 (46)
215 2lce_A B-cell lymphoma 6 prote 57.3 1.8 6E-05 30.9 -0.5 21 166-186 46-66 (74)
216 4gzn_C ZFP-57, zinc finger pro 56.3 1.7 5.8E-05 31.7 -0.8 23 167-191 6-28 (60)
217 1bbo_A Human enhancer-binding 55.8 1.5 5E-05 29.4 -1.1 21 166-186 30-50 (57)
218 1bbo_A Human enhancer-binding 55.1 1.9 6.5E-05 28.8 -0.6 20 167-186 3-22 (57)
219 2adr_A ADR1; transcription reg 54.8 1.9 6.7E-05 29.1 -0.6 20 167-186 4-23 (60)
220 2drp_A Protein (tramtrack DNA- 54.6 1.8 6.3E-05 29.9 -0.8 22 165-186 40-61 (66)
221 2drp_A Protein (tramtrack DNA- 53.9 1.9 6.6E-05 29.7 -0.8 21 166-186 11-31 (66)
222 2gqj_A Zinc finger protein KIA 53.8 2.3 7.7E-05 32.4 -0.5 26 164-191 23-49 (98)
223 1x5w_A Zinc finger protein 64, 53.7 1.7 5.8E-05 30.6 -1.1 22 165-186 9-30 (70)
224 2eps_A POZ-, at HOOK-, and zin 52.8 1.7 6E-05 29.4 -1.1 21 166-186 13-33 (54)
225 3uk3_C Zinc finger protein 217 52.6 1.8 6.1E-05 28.9 -1.1 21 166-186 33-53 (57)
226 2ct1_A Transcriptional repress 52.4 2.1 7.3E-05 30.6 -0.8 21 166-186 16-36 (77)
227 2cot_A Zinc finger protein 435 52.3 2 7E-05 30.7 -0.9 20 166-185 47-66 (77)
228 2lv2_A Insulinoma-associated p 51.9 2.1 7.3E-05 33.2 -0.9 21 166-186 29-49 (85)
229 1f2i_G Fusion of N-terminal 17 51.2 2.3 7.7E-05 30.0 -0.8 21 166-186 50-70 (73)
230 2gqj_A Zinc finger protein KIA 51.0 2.1 7.2E-05 32.6 -1.0 21 165-185 54-74 (98)
231 2d9h_A Zinc finger protein 692 50.5 2 7E-05 30.7 -1.1 24 166-191 8-31 (78)
232 2adr_A ADR1; transcription reg 50.0 2.4 8.2E-05 28.7 -0.8 21 166-186 31-51 (60)
233 1x6e_A Zinc finger protein 24; 50.0 2.1 7.2E-05 30.4 -1.1 21 166-186 43-63 (72)
234 2pfz_A Putative exported prote 49.9 53 0.0018 30.0 8.0 73 6-88 214-286 (301)
235 2ctu_A Zinc finger protein 483 49.5 3.2 0.00011 28.7 -0.2 23 164-186 38-60 (73)
236 1x5w_A Zinc finger protein 64, 49.4 2.2 7.5E-05 30.0 -1.1 21 166-186 38-58 (70)
237 2ct1_A Transcriptional repress 48.7 2.3 7.8E-05 30.5 -1.1 22 165-186 45-66 (77)
238 2d9h_A Zinc finger protein 692 48.5 2.7 9.1E-05 30.1 -0.8 21 166-186 39-59 (78)
239 1x6e_A Zinc finger protein 24; 48.3 2.3 7.9E-05 30.2 -1.1 22 165-186 14-35 (72)
240 2eln_A Zinc finger protein 406 46.7 2.4 8.2E-05 28.4 -1.2 20 166-185 10-31 (38)
241 2kmk_A Zinc finger protein GFI 46.2 3.1 0.00011 29.4 -0.7 22 165-186 57-78 (82)
242 2qgu_A Probable signal peptide 46.2 16 0.00055 32.9 3.8 46 47-92 69-116 (211)
243 2dmd_A Zinc finger protein 64, 46.1 3.7 0.00013 30.1 -0.3 22 165-186 8-29 (96)
244 2rpc_A Zinc finger protein ZIC 45.5 6.4 0.00022 31.5 1.0 25 162-186 22-46 (155)
245 1va1_A Transcription factor SP 45.1 2.5 8.5E-05 26.2 -1.2 21 166-186 9-31 (37)
246 1x6h_A Transcriptional repress 44.9 2.8 9.6E-05 30.0 -1.2 21 165-185 47-67 (86)
247 2ctd_A Zinc finger protein 512 44.4 3.6 0.00012 31.9 -0.7 21 166-186 35-56 (96)
248 2ej4_A Zinc finger protein ZIC 44.4 3.5 0.00012 30.3 -0.7 21 166-186 63-83 (95)
249 2lv2_A Insulinoma-associated p 42.3 3.7 0.00013 31.8 -0.9 21 166-186 57-77 (85)
250 1x6h_A Transcriptional repress 42.2 3.3 0.00011 29.6 -1.1 21 166-186 16-36 (86)
251 2cot_A Zinc finger protein 435 41.6 3.6 0.00012 29.4 -1.0 22 165-186 18-39 (77)
252 2yt9_A Zinc finger-containing 40.8 3.8 0.00013 30.0 -1.0 22 165-186 65-86 (95)
253 1a1h_A QGSR zinc finger peptid 40.8 4.2 0.00014 29.3 -0.8 21 166-186 63-83 (90)
254 2kmk_A Zinc finger protein GFI 40.8 3.5 0.00012 29.1 -1.1 20 167-186 3-22 (82)
255 2pfy_A Putative exported prote 40.6 47 0.0016 30.3 6.1 72 6-87 215-286 (301)
256 2ctd_A Zinc finger protein 512 40.0 4 0.00014 31.6 -1.0 20 166-185 63-83 (96)
257 2dmi_A Teashirt homolog 3; zin 39.8 3.4 0.00011 31.6 -1.5 26 166-191 81-106 (115)
258 3fx7_A Putative uncharacterize 39.7 1.4E+02 0.0049 24.5 8.2 51 51-104 24-77 (94)
259 1llm_C Chimera of ZIF23-GCN4; 39.4 11 0.00039 27.4 1.5 24 164-187 57-80 (88)
260 2wbs_A Krueppel-like factor 4; 38.8 4.2 0.00014 29.2 -1.0 21 166-186 66-86 (89)
261 2ebt_A Krueppel-like factor 5; 38.5 4.4 0.00015 29.8 -1.0 21 166-186 76-96 (100)
262 1wjp_A Zinc finger protein 295 38.3 5.5 0.00019 30.1 -0.5 20 166-185 43-62 (107)
263 1llm_C Chimera of ZIF23-GCN4; 38.0 4.9 0.00017 29.4 -0.8 21 166-186 4-24 (88)
264 1wjp_A Zinc finger protein 295 37.9 6 0.00021 29.9 -0.3 22 165-186 69-90 (107)
265 2ee8_A Protein ODD-skipped-rel 37.7 4.6 0.00016 30.2 -1.0 22 165-186 17-38 (106)
266 1ncs_A Peptide M30F, transcrip 37.5 4 0.00014 26.9 -1.2 21 166-186 19-41 (47)
267 2ee8_A Protein ODD-skipped-rel 37.3 4.6 0.00016 30.2 -1.0 24 165-190 73-96 (106)
268 2eod_A TNF receptor-associated 36.6 4.6 0.00016 28.2 -1.1 21 166-186 37-58 (66)
269 2yt9_A Zinc finger-containing 36.4 4.6 0.00016 29.5 -1.2 22 165-186 7-28 (95)
270 3u65_B TP33 protein; tetratric 35.0 73 0.0025 30.0 6.6 70 6-85 234-303 (328)
271 2ent_A Krueppel-like factor 15 34.6 4.7 0.00016 25.9 -1.2 21 166-186 13-35 (48)
272 2wbt_A B-129; zinc finger; 2.7 34.5 6.5 0.00022 30.6 -0.6 21 166-186 101-121 (129)
273 1x3c_A Zinc finger protein 292 34.5 5.2 0.00018 31.7 -1.2 26 165-191 27-54 (73)
274 2dmd_A Zinc finger protein 64, 34.4 5.3 0.00018 29.2 -1.1 21 166-186 65-85 (96)
275 2ej4_A Zinc finger protein ZIC 32.9 11 0.00038 27.5 0.5 21 166-186 26-46 (95)
276 2wbt_A B-129; zinc finger; 2.7 32.8 6.8 0.00023 30.5 -0.8 21 166-186 75-95 (129)
277 1a1h_A QGSR zinc finger peptid 32.7 6.7 0.00023 28.2 -0.8 22 165-186 34-55 (90)
278 2jp9_A Wilms tumor 1; DNA bind 32.7 6.7 0.00023 29.6 -0.8 21 166-186 67-87 (119)
279 2v4h_A NF-kappa-B essential mo 31.8 43 0.0015 28.4 3.9 59 237-308 26-92 (110)
280 2qgu_A Probable signal peptide 31.6 39 0.0013 30.4 3.9 37 3-39 80-117 (211)
281 2csh_A Zinc finger protein 297 31.6 6.2 0.00021 29.8 -1.2 21 166-186 66-86 (110)
282 3eph_A TRNA isopentenyltransfe 31.4 7.2 0.00025 39.2 -1.0 31 166-196 361-397 (409)
283 2epa_A Krueppel-like factor 10 31.4 7.2 0.00025 27.3 -0.8 23 164-186 16-40 (72)
284 2dlq_A GLI-kruppel family memb 31.0 7.9 0.00027 29.4 -0.7 22 165-186 7-28 (124)
285 2csh_A Zinc finger protein 297 30.9 7.6 0.00026 29.3 -0.8 21 166-186 38-58 (110)
286 2dlq_A GLI-kruppel family memb 30.6 6.7 0.00023 29.8 -1.1 21 166-186 95-115 (124)
287 2dmi_A Teashirt homolog 3; zin 30.5 6.9 0.00024 29.8 -1.1 21 166-186 20-40 (115)
288 1fu9_A U-shaped transcriptiona 29.8 7.4 0.00025 27.2 -0.9 23 163-185 6-28 (36)
289 2lt7_A Transcriptional regulat 28.7 8.6 0.00029 31.6 -0.9 22 167-190 24-45 (133)
290 1x6f_A Zinc finger protein 462 28.1 7.8 0.00027 29.9 -1.1 25 165-191 25-49 (88)
291 2hzl_A Trap-T family sorbitol/ 27.9 96 0.0033 29.0 6.1 22 6-27 251-272 (365)
292 2dlk_A Novel protein; ZF-C2H2 27.7 8.1 0.00028 27.2 -1.1 21 166-186 39-61 (79)
293 2ghf_A ZHX1, zinc fingers and 27.2 10 0.00035 30.3 -0.7 20 166-185 51-70 (102)
294 1ubd_C Protein (YY1 zinc finge 27.1 11 0.00036 28.9 -0.6 22 165-186 34-55 (124)
295 1weu_A Inhibitor of growth fam 26.6 37 0.0013 27.5 2.5 17 157-174 28-44 (91)
296 2d8v_A Zinc finger FYVE domain 24.6 14 0.00049 28.9 -0.2 21 164-184 27-47 (67)
297 3fxb_A Trap dicarboxylate tran 24.2 3E+02 0.01 25.5 8.7 73 7-89 232-306 (326)
298 2vpn_A Periplasmic substrate b 23.1 80 0.0027 29.0 4.5 72 6-87 217-290 (316)
299 2j7j_A Transcription factor II 22.5 12 0.00042 26.3 -0.9 22 168-191 4-27 (85)
300 2rpc_A Zinc finger protein ZIC 21.1 15 0.00053 29.2 -0.7 21 166-186 63-83 (155)
301 2i13_A AART; DNA binding, zinc 21.1 15 0.00052 30.4 -0.8 21 166-186 162-182 (190)
302 2zzv_A ABC transporter, solute 20.8 1.3E+02 0.0046 28.1 5.6 70 6-85 258-327 (361)
303 2ghf_A ZHX1, zinc fingers and 20.1 14 0.00048 29.5 -1.2 21 166-186 19-39 (102)
No 1
>2yrq_A High mobility group protein B1; HMG box domain, DNA binding, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=6.1e-20 Score=160.74 Aligned_cols=95 Identities=29% Similarity=0.474 Sum_probs=87.8
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhccc------------------chhhh------------hhhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS------------------DAYQS------------YLIL 50 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~K------------------DAY~l------------fPgl 50 (382)
|+++||++|++||++||++|+++|..++++|..+|..|.+. +||++ +|++
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~~~~~~kk~~kdp~~pKrP~saf~lf~~~~r~~~~~~~p~~ 127 (173)
T 2yrq_A 48 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 127 (173)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHCCCCCCCSSCSCCCSSSCCCCCCHHHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccCCccccCcccHHHHHHHHHHHHHHHHCCCC
Confidence 57999999999999999999999999999999999999531 37754 4789
Q ss_pred hHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 51 LFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 51 SftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
++.+|++.||++|++||+++|++|.++|+.++++|.++|.+|+.+
T Consensus 128 ~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~k 172 (173)
T 2yrq_A 128 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 172 (173)
T ss_dssp CHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999864
No 2
>2gzk_A Sex-determining region on Y / HMGB1; protein-DNA complex, HMG BOX, amphoterin, DNA/structural protein complex; NMR {Homo sapiens} SCOP: a.21.1.1 a.21.1.1
Probab=99.79 E-value=6.7e-20 Score=157.98 Aligned_cols=94 Identities=27% Similarity=0.425 Sum_probs=86.9
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc------------------cchhhh------------hhhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK------------------SDAYQS------------YLIL 50 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~------------------KDAY~l------------fPgl 50 (382)
|+++||++|++||+++|++|+++|..++++|..+|..|.. .+||++ +|++
T Consensus 35 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~~k~~~kk~~kdp~~pKrp~say~lf~~~~r~~~~~~~p~~ 114 (159)
T 2gzk_A 35 ISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 114 (159)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCSSCSCCCCCCGGGSCCTTCCCCCCCHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhhHHHhccHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccchhhHhhHHHHHHhCCCC
Confidence 6899999999999999999999999999999999999952 137754 5789
Q ss_pred hHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHh
Q psy1990 51 LFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 94 (382)
Q Consensus 51 SftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkk 94 (382)
++++|++.||++|++||+++|++|+++|+.++++|.++|.+|++
T Consensus 115 ~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~ 158 (159)
T 2gzk_A 115 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 158 (159)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999975
No 3
>3tmm_A Transcription factor A, mitochondrial; HMG, high mobility group, transcription, LSP1, mitochon transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens}
Probab=99.75 E-value=2.3e-18 Score=159.43 Aligned_cols=96 Identities=26% Similarity=0.509 Sum_probs=86.6
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc---------------------------------------c
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK---------------------------------------S 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~---------------------------------------K 41 (382)
|+|+||++|++||++||.+|+++|+.++++|+++|..|.. .
T Consensus 72 isk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~~p~~~~~~~~~~~~k~~krk~~~kkk~~kdp~~PKrP~ 151 (238)
T 3tmm_A 72 LIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPR 151 (238)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhhhhcccchhhhcccCCCCCCC
Confidence 5799999999999999999999999999999999999930 1
Q ss_pred chhhhhh--------hhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 42 DAYQSYL--------ILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 42 DAY~lfP--------glSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+||++|. +....+|++.||++|++|++++|++|+++|+.++++|+++|++|+.+.
T Consensus 152 say~lF~~e~r~~~k~~~p~ei~k~lg~~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~y~~k~ 214 (238)
T 3tmm_A 152 SAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQM 214 (238)
T ss_dssp CHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3887764 456779999999999999999999999999999999999999998754
No 4
>3tq6_A Transcription factor A, mitochondrial; transcription, transcription regulation, mitochondrion; HET: DNA BRU 1PE; 2.45A {Homo sapiens}
Probab=99.75 E-value=2.5e-18 Score=156.95 Aligned_cols=96 Identities=26% Similarity=0.509 Sum_probs=86.8
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc---------------------------------------c
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK---------------------------------------S 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~---------------------------------------K 41 (382)
|+|+||++|++||++||.+|+++|..++++|.++|..|.. .
T Consensus 40 isk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~tp~q~~~~~~~~~~~~~krk~~kkkk~~kdp~~PKrP~ 119 (214)
T 3tq6_A 40 LIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPR 119 (214)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHccCHHhhhHHHHHHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHHHHHhhhcchhhhhhhccccCccccc
Confidence 5899999999999999999999999999999999999931 1
Q ss_pred chhhhhh--------hhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 42 DAYQSYL--------ILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 42 DAY~lfP--------glSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+||++|. +..+.+|++.||++|++||+++|++|+++|+.++++|+++|++|+++.
T Consensus 120 say~lF~~e~r~~~k~~~p~ei~k~lg~~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~y~~~~ 182 (214)
T 3tq6_A 120 SAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQM 182 (214)
T ss_dssp CHHHHHHHHHTTTSSCSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHhhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3887763 456789999999999999999999999999999999999999998764
No 5
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=99.32 E-value=7.1e-13 Score=105.95 Aligned_cols=57 Identities=46% Similarity=0.690 Sum_probs=53.6
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLR 103 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~aYk~~~k 103 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.++|.+|+.+.+|+.+.+
T Consensus 30 ~p~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~~~~~ 86 (92)
T 2crj_A 30 HPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWAYQQSEAYKVCTE 86 (92)
T ss_dssp CTTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHSSHHHHCSSC
T ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHh
Confidence 578999999999999999999999999999999999999999999999999987643
No 6
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=99.21 E-value=3e-11 Score=98.98 Aligned_cols=50 Identities=24% Similarity=0.401 Sum_probs=46.8
Q ss_pred hhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1990 49 ILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAY 98 (382)
Q Consensus 49 glSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~aY 98 (382)
+++++||+|.||++|+.|+++||++|+++|++++++|+++|++|..+...
T Consensus 31 ~~~~~eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~~~~ 80 (101)
T 1v63_A 31 HLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSP 80 (101)
T ss_dssp TSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH
Confidence 47899999999999999999999999999999999999999999987543
No 7
>1l8y_A Upstream binding factor 1; HUBF, HMG box 5, DNA binding domain, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1l8z_A 2hdz_A
Probab=99.19 E-value=1.4e-11 Score=101.02 Aligned_cols=50 Identities=26% Similarity=0.420 Sum_probs=46.3
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDA 97 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~a 97 (382)
+|+ +++||+|.||++|++||++||++|+++|+.+|++|+++|++|+.+.+
T Consensus 27 ~p~-~~~evsK~lGe~Wk~ls~~eK~pye~kA~~dK~rYekEm~~Y~~~~~ 76 (91)
T 1l8y_A 27 FKN-DRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPA 76 (91)
T ss_dssp TTS-THHHHHHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHTTSCGGG
T ss_pred cCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 467 89999999999999999999999999999999999999999987544
No 8
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=99.16 E-value=1.5e-11 Score=94.38 Aligned_cols=48 Identities=27% Similarity=0.434 Sum_probs=46.0
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 94 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkk 94 (382)
+|++++++|++.||++|++||+++|++|.++|+.++++|.++|.+|+.
T Consensus 29 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~ 76 (77)
T 1hme_A 29 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 76 (77)
T ss_dssp CTTCCHHHHHHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999999999999999999999975
No 9
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=3.5e-11 Score=98.05 Aligned_cols=53 Identities=30% Similarity=0.460 Sum_probs=48.9
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhhhhH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQ 99 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~aYk 99 (382)
+|++++.+|+++||++|++|++++|++|.++|+.++++|.++|.+|+.+..++
T Consensus 40 ~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~ 92 (102)
T 2co9_A 40 NPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSK 92 (102)
T ss_dssp CTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred CCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 57899999999999999999999999999999999999999999998765443
No 10
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=1.9e-11 Score=97.62 Aligned_cols=49 Identities=24% Similarity=0.270 Sum_probs=46.7
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|++++.||+++||++|++|++++|++|.++|+.++++|.++|++|+..
T Consensus 30 ~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~y~~~ 78 (92)
T 2cs1_A 30 NPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQ 78 (92)
T ss_dssp CCSSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHTTTHHHHHHHHHHTST
T ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999999999764
No 11
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=99.13 E-value=2.3e-11 Score=91.83 Aligned_cols=46 Identities=33% Similarity=0.479 Sum_probs=42.9
Q ss_pred hhhhh--HHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILL--FFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 92 (382)
Q Consensus 47 fPglS--ftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeY 92 (382)
+|+++ ++||++.||++|++||+++|++|.++|+.++++|.++|++|
T Consensus 24 ~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y 71 (71)
T 1ckt_A 24 HPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 71 (71)
T ss_dssp CTTCCCCHHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57775 59999999999999999999999999999999999999876
No 12
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=99.12 E-value=5.7e-12 Score=99.17 Aligned_cols=53 Identities=19% Similarity=0.306 Sum_probs=49.7
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhhhhH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQ 99 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~aYk 99 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.++|.+|+..+.|.
T Consensus 25 ~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~p~~~ 77 (86)
T 2lef_A 25 STLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 77 (86)
T ss_dssp SSCCCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHSTTCCSCSSTT
T ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcccccCCCCCC
Confidence 57899999999999999999999999999999999999999999998777654
No 13
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=99.12 E-value=5.2e-11 Score=91.12 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=44.7
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++++||++.||++|++|++ |++|.++|++++++|+++|++|+++
T Consensus 26 ~p~~~~~eisk~lg~~Wk~ls~--K~~y~~~A~~~k~~y~~~~~~Y~~k 72 (73)
T 3nm9_A 26 NPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAVKEFEAN 72 (73)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSC--CHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHcCCc--hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999998 9999999999999999999999864
No 14
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=99.11 E-value=3.6e-11 Score=97.87 Aligned_cols=49 Identities=18% Similarity=0.369 Sum_probs=46.9
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++++||+++||++|++||+++|++|.++|+.++++|.++|++|...
T Consensus 33 ~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~Y~~e~~~y~~~ 81 (99)
T 1k99_A 33 HPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRED 81 (99)
T ss_dssp CTTSCSHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHGGGGGC
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999875
No 15
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=7.1e-11 Score=93.08 Aligned_cols=47 Identities=30% Similarity=0.427 Sum_probs=44.1
Q ss_pred hhhhh--HHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILL--FFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 93 (382)
Q Consensus 47 fPglS--ftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYk 93 (382)
+|+++ +.||++.||++|++||+++|++|.++|+.++++|.++|++|+
T Consensus 38 ~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y~ 86 (86)
T 2eqz_A 38 NPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYG 86 (86)
T ss_dssp CTTSCCCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46775 799999999999999999999999999999999999999994
No 16
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=99.10 E-value=2.3e-11 Score=91.49 Aligned_cols=47 Identities=26% Similarity=0.441 Sum_probs=42.7
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 93 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYk 93 (382)
+|++++++|++.||++|++||+++|++|.++|+.++++|.+++.+|+
T Consensus 25 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~YK 71 (71)
T 4a3n_A 25 NPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYK 71 (71)
T ss_dssp CTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCcCcC
Confidence 57999999999999999999999999999999999999999998884
No 17
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=99.09 E-value=3.9e-11 Score=92.92 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=46.4
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.++|.+|+-.
T Consensus 25 ~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~ 73 (80)
T 1gt0_D 25 NPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYR 73 (80)
T ss_dssp STTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCcccccC
Confidence 5789999999999999999999999999999999999999999999643
No 18
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=99.09 E-value=1e-10 Score=87.99 Aligned_cols=51 Identities=31% Similarity=0.524 Sum_probs=45.9
Q ss_pred chhhhhh--------hhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHH
Q psy1990 42 DAYQSYL--------ILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 92 (382)
Q Consensus 42 DAY~lfP--------glSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeY 92 (382)
+||++|. +..+++|++.||++|++||+++|++|.++|+.++++|+++|++|
T Consensus 8 say~~F~~~~r~~~k~~~p~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~y 66 (67)
T 3fgh_A 8 SAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW 66 (67)
T ss_dssp CHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5777653 34568999999999999999999999999999999999999998
No 19
>1v64_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=99.07 E-value=2.2e-10 Score=94.91 Aligned_cols=55 Identities=27% Similarity=0.377 Sum_probs=50.6
Q ss_pred chhhhhh--------hhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 42 DAYQSYL--------ILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 42 DAY~lfP--------glSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+||++|. +++++||++.||++|++|+++||++|.++|+.++++|.++|.+|..+.
T Consensus 23 say~lF~~e~r~~~k~~~~~eisk~lg~~Wk~Ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~~ 85 (108)
T 1v64_A 23 NSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESL 85 (108)
T ss_dssp SHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5887664 688999999999999999999999999999999999999999998764
No 20
>1cg7_A Protein (NON histone protein 6 A); HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.21.1.1 PDB: 1j5n_A 1lwm_A
Probab=99.07 E-value=3.7e-11 Score=96.32 Aligned_cols=50 Identities=38% Similarity=0.555 Sum_probs=47.5
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+|++++.||++.||++|++||+++|++|.++|+.++++|.++|.+|+.+.
T Consensus 43 ~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~Y~~~~ 92 (93)
T 1cg7_A 43 NPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYNATL 92 (93)
T ss_dssp CTTSCHHHHTTTHHHHHHTTHHHHHHHHHHHHTTHHHHTTHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 57899999999999999999999999999999999999999999998753
No 21
>1wxl_A Single-strand recognition protein; FACT, SSRP1, HMG, DNA binding protein; NMR {Drosophila melanogaster}
Probab=99.04 E-value=9.2e-11 Score=89.71 Aligned_cols=47 Identities=28% Similarity=0.494 Sum_probs=44.6
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++++||++.||++|++| ++|++|.++|+.++++|.++|.+|+++
T Consensus 26 ~p~~~~~eisk~lg~~Wk~l--~eK~~y~~~A~~~k~~y~~e~~~Y~~~ 72 (73)
T 1wxl_A 26 NPGIKVTEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYKPE 72 (73)
T ss_dssp STTCCHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHTTTGGGTTC
T ss_pred CCCCCHHHHHHHHHHHHHhh--HhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 58999999999999999999 899999999999999999999999764
No 22
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=99.04 E-value=8.3e-11 Score=92.51 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=46.3
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|..++.+|+-.
T Consensus 27 ~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~ 75 (85)
T 1j46_A 27 NPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYR 75 (85)
T ss_dssp STTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCcccccC
Confidence 5789999999999999999999999999999999999999999999643
No 23
>2lhj_A High mobility group protein homolog NHP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; NMR {Babesia bovis}
Probab=99.03 E-value=8.5e-11 Score=94.68 Aligned_cols=49 Identities=29% Similarity=0.451 Sum_probs=46.6
Q ss_pred hhhhh--HHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILL--FFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglS--ftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++ +++|++.||++|++||+++|++|.++|+.++++|.++|.+|+.+
T Consensus 45 ~p~~~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~y~~~ 95 (97)
T 2lhj_A 45 NPEIAKDVAAIGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQR 95 (97)
T ss_dssp CTTSTTCSSHHHHHHHHTSSSSCSTTTSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 47888 99999999999999999999999999999999999999999865
No 24
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=99.03 E-value=4.3e-11 Score=91.63 Aligned_cols=47 Identities=23% Similarity=0.328 Sum_probs=45.0
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 93 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYk 93 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.+++.+|+
T Consensus 27 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yk 73 (76)
T 1hry_A 27 NPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYK 73 (76)
T ss_dssp CSCCSSSHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred CcCCCHHHHHHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 57889999999999999999999999999999999999999999886
No 25
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=99.02 E-value=7.3e-11 Score=90.80 Aligned_cols=48 Identities=19% Similarity=0.262 Sum_probs=45.8
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 94 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkk 94 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.+++.+|+-
T Consensus 25 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~p~Yky 72 (79)
T 3u2b_C 25 SPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYKY 72 (79)
T ss_dssp STTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSSSCCC
T ss_pred CcCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCee
Confidence 578999999999999999999999999999999999999999999964
No 26
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=99.02 E-value=7.7e-11 Score=91.62 Aligned_cols=49 Identities=24% Similarity=0.407 Sum_probs=46.2
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|++++++|+++||++|++|++++|++|.++|+.++++|.++|.+|+-+
T Consensus 29 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yky~ 77 (83)
T 3f27_D 29 NPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYR 77 (83)
T ss_dssp CSSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCCCC
T ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCCCCeeC
Confidence 4789999999999999999999999999999999999999999999643
No 27
>1aab_A High mobility group protein; HMG-BOX, DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1
Probab=99.02 E-value=4.7e-11 Score=93.22 Aligned_cols=49 Identities=31% Similarity=0.432 Sum_probs=45.4
Q ss_pred hhhhh--HHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILL--FFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglS--ftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++ ++||++.||++|++||+++|++|.++|+.++++|.++|.+|+.+
T Consensus 30 ~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~~ 80 (83)
T 1aab_A 30 HPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80 (83)
T ss_dssp CTTTCCCSSSSHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred CCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46775 59999999999999999999999999999999999999999765
No 28
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=98.98 E-value=4.1e-11 Score=93.37 Aligned_cols=49 Identities=29% Similarity=0.279 Sum_probs=46.1
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|++++.+|+++||++|++||+++|++|.++|+.++++|.++|.+|+..
T Consensus 30 ~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~yk~~ 78 (82)
T 1wz6_A 30 HPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRSG 78 (82)
T ss_dssp CSSSCTTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHCCSCSSCCCC
T ss_pred CCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Confidence 5788999999999999999999999999999999999999999999754
No 29
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=94.50 Aligned_cols=48 Identities=25% Similarity=0.400 Sum_probs=45.7
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 94 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkk 94 (382)
+|++++.+|+++||++|+.|++++|++|.++|+.++++|.++|.+|+-
T Consensus 52 ~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Yky 99 (106)
T 4euw_A 52 YPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKY 99 (106)
T ss_dssp CTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence 478999999999999999999999999999999999999999999963
No 30
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.97 E-value=1.6e-10 Score=89.81 Aligned_cols=47 Identities=21% Similarity=0.381 Sum_probs=44.4
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 93 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYk 93 (382)
+|++++++|+++||++|++||+++|++|.++|+.++++|.+++.+|+
T Consensus 27 ~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~p~Yk 73 (81)
T 1i11_A 27 FPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK 73 (81)
T ss_dssp CSSCCHHHHHHHHHHHHTTSCSGGGHHHHHHHHHHHHHHHTTCSCC-
T ss_pred CCCCCHHHHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 57899999999999999999999999999999999999999999885
No 31
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=98.96 E-value=1.5e-10 Score=91.52 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=44.5
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 93 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYk 93 (382)
+|++++.+|+++||++|++|++++|++|.++|+.++++|.+++.+|+
T Consensus 40 ~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~P~Yk 86 (87)
T 2e6o_A 40 YPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCW 86 (87)
T ss_dssp CTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 57899999999999999999999999999999999999999988774
No 32
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.82 E-value=2e-10 Score=91.57 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=42.2
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 91 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMke 91 (382)
+|++++.||+++||++|++|++++|++|.++|+.++++|.++|..
T Consensus 43 ~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~ 87 (90)
T 1wgf_A 43 RPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSGP 87 (90)
T ss_dssp CTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTCCCCSS
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999988754
No 33
>3tq6_A Transcription factor A, mitochondrial; transcription, transcription regulation, mitochondrion; HET: DNA BRU 1PE; 2.45A {Homo sapiens}
Probab=98.73 E-value=7.9e-09 Score=94.32 Aligned_cols=50 Identities=18% Similarity=0.337 Sum_probs=47.4
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+|+++++||++.||++|+.||++||++|+++|..++++|.++|..|..+.
T Consensus 32 ~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~ 81 (214)
T 3tq6_A 32 NPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQL 81 (214)
T ss_dssp CTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHccCHHhhhHHHHHHHHHHHHHHHHhhhhcccC
Confidence 48999999999999999999999999999999999999999999998653
No 34
>3tmm_A Transcription factor A, mitochondrial; HMG, high mobility group, transcription, LSP1, mitochon transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens}
Probab=98.72 E-value=8.5e-09 Score=95.44 Aligned_cols=50 Identities=18% Similarity=0.337 Sum_probs=47.4
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+|+++++||++.||++|+.||++||++|+++|+.++++|+++|+.|..+.
T Consensus 64 ~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~ 113 (238)
T 3tmm_A 64 NPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQL 113 (238)
T ss_dssp STTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999998653
No 35
>2yrq_A High mobility group protein B1; HMG box domain, DNA binding, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=1.1e-08 Score=89.48 Aligned_cols=50 Identities=30% Similarity=0.441 Sum_probs=46.5
Q ss_pred hhh--hhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy1990 47 YLI--LLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 96 (382)
Q Consensus 47 fPg--lSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks~ 96 (382)
+|+ +++.||++.||++|+.||++||++|.++|+.++++|.++|.+|....
T Consensus 38 ~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~~~ 89 (173)
T 2yrq_A 38 HPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 89 (173)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 477 58999999999999999999999999999999999999999997653
No 36
>1l8y_A Upstream binding factor 1; HUBF, HMG box 5, DNA binding domain, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1l8z_A 2hdz_A
Probab=98.65 E-value=1.3e-08 Score=83.47 Aligned_cols=41 Identities=29% Similarity=0.542 Sum_probs=39.2
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~K 41 (382)
|+|+||++|++||++||++|+++|.++|++|+++|..|+++
T Consensus 34 vsK~lGe~Wk~ls~~eK~pye~kA~~dK~rYekEm~~Y~~~ 74 (91)
T 1l8y_A 34 ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAP 74 (91)
T ss_dssp HHHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHTTSCG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 58999999999999999999999999999999999999865
No 37
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=98.65 E-value=1.8e-08 Score=75.65 Aligned_cols=38 Identities=34% Similarity=0.662 Sum_probs=36.8
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 38 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeY 38 (382)
|+|+||++|++||+++|++|+++|.+++++|+++|..|
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~y 66 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW 66 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999988
No 38
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=98.59 E-value=1.8e-08 Score=75.99 Aligned_cols=38 Identities=37% Similarity=0.629 Sum_probs=36.5
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 38 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeY 38 (382)
|+|+||++|++||+++|++|+++|+.++++|.++|..|
T Consensus 34 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y 71 (71)
T 1ckt_A 34 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 71 (71)
T ss_dssp HHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999876
No 39
>2cto_A Novel protein; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=8e-09 Score=84.51 Aligned_cols=48 Identities=21% Similarity=0.316 Sum_probs=43.3
Q ss_pred chhhhhh----------hhhHHHHhHHH---HHHhcCCCcchhhhhHHHHHHHHHHHHHHH
Q psy1990 42 DAYQSYL----------ILLFFQVTKLL---GNEWSKLSLPEKKVYLDRAEVDKKRYREEL 89 (382)
Q Consensus 42 DAY~lfP----------glSftEIsK~L---GErWK~LSdEEKqpYedkAekdKeRYekEM 89 (382)
+||++|. +++++||++.| |++|+.|+++||++|+++|+++|++|++++
T Consensus 16 sAf~lF~~e~R~~ik~e~~~~~eisK~l~~cGe~Wk~ls~eEK~pYe~~A~~~K~~y~kd~ 76 (93)
T 2cto_A 16 NAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDP 76 (93)
T ss_dssp CHHHHHHHTTHHHHHHHTCCCSSHHHHTGGGHHHHHHSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccc
Confidence 5787653 57889999999 999999999999999999999999999885
No 40
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=4.2e-08 Score=77.21 Aligned_cols=39 Identities=33% Similarity=0.519 Sum_probs=37.4
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|+++|+.++++|.++|..|+
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y~ 86 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYG 86 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999999999984
No 41
>1aab_A High mobility group protein; HMG-BOX, DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1
Probab=98.55 E-value=4.1e-08 Score=76.46 Aligned_cols=41 Identities=34% Similarity=0.562 Sum_probs=38.9
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~K 41 (382)
|+|+||++|++||+++|++|+++|..++++|.++|..|..+
T Consensus 40 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~~ 80 (83)
T 1aab_A 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80 (83)
T ss_dssp SHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 68999999999999999999999999999999999999753
No 42
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=98.54 E-value=4.1e-08 Score=78.26 Aligned_cols=47 Identities=51% Similarity=0.855 Sum_probs=42.9
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSY 47 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lf 47 (382)
|+|+||++|++||+++|++|+++|..++++|.++|..|+.+.+|..|
T Consensus 38 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~~~ 84 (92)
T 2crj_A 38 ITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWAYQQSEAYKVC 84 (92)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHSSHHHHCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 68999999999999999999999999999999999999887666543
No 43
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.52 E-value=5.9e-08 Score=79.36 Aligned_cols=40 Identities=25% Similarity=0.533 Sum_probs=38.1
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+|+||++|++|+++||++|+++|+++|++|.++|..|..
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999999964
No 44
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=6.3e-08 Score=77.19 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=38.8
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~K 41 (382)
|+|+||++|++||+++|++|+++|++++++|.++|..|+..
T Consensus 38 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~y~~~ 78 (92)
T 2cs1_A 38 ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQ 78 (92)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHTTTHHHHHHHHHHTST
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999999999753
No 45
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=98.45 E-value=7.3e-08 Score=73.78 Aligned_cols=40 Identities=30% Similarity=0.606 Sum_probs=38.2
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+++||++|++||+++|++|.++|..++++|.++|..|+.
T Consensus 37 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~ 76 (77)
T 1hme_A 37 VAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 76 (77)
T ss_dssp HHHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999964
No 46
>2gzk_A Sex-determining region on Y / HMGB1; protein-DNA complex, HMG BOX, amphoterin, DNA/structural protein complex; NMR {Homo sapiens} SCOP: a.21.1.1 a.21.1.1
Probab=98.42 E-value=4.9e-08 Score=83.89 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=46.5
Q ss_pred hhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy1990 47 YLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 95 (382)
Q Consensus 47 fPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekEMkeYkks 95 (382)
+|+++++||++.||++|+.||+++|++|.++|..++++|..+|..|...
T Consensus 27 ~P~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~~ 75 (159)
T 2gzk_A 27 NPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYR 75 (159)
T ss_dssp CSSCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCSSCSCC
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHhccHHHHHHHHHHHHHHHhhccccc
Confidence 6899999999999999999999999999999999999999999998654
No 47
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=8.5e-08 Score=76.06 Aligned_cols=35 Identities=20% Similarity=0.093 Sum_probs=33.3
Q ss_pred hhhhh-HHHHhHHHHHHhcCCCcchhhhhHHHHHHH
Q psy1990 47 YLILL-FFQVTKLLGNEWSKLSLPEKKVYLDRAEVD 81 (382)
Q Consensus 47 fPglS-ftEIsK~LGErWK~LSdEEKqpYedkAekd 81 (382)
+|+++ ++||+|.||++|++||++||++|+++|+.+
T Consensus 28 ~P~~~~~~eisK~lge~Wk~ls~eeK~~y~~~A~~d 63 (81)
T 2d7l_A 28 NPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGE 63 (81)
T ss_dssp CTTCCSHHHHHHHHHHHHSSSCHHHHHHHHHHTTSS
T ss_pred CCCCchhHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 58998 999999999999999999999999999887
No 48
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=98.38 E-value=1.4e-07 Score=76.56 Aligned_cols=41 Identities=22% Similarity=0.494 Sum_probs=38.9
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 41 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~K 41 (382)
|+++||++|++||+++|++|+++|..++++|.++|..|...
T Consensus 41 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~Y~~e~~~y~~~ 81 (99)
T 1k99_A 41 LTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRED 81 (99)
T ss_dssp HHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHGGGGGC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999754
No 49
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=98.37 E-value=1.5e-07 Score=72.65 Aligned_cols=39 Identities=33% Similarity=0.510 Sum_probs=37.5
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|+++|..++++|..+|..|+
T Consensus 33 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk 71 (80)
T 1gt0_D 33 ISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYK 71 (80)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCcccc
Confidence 689999999999999999999999999999999999985
No 50
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=98.37 E-value=1.4e-07 Score=72.03 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=37.3
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+|+||++|++||+++|++|.++|+.++++|.++|..|+
T Consensus 35 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yk 73 (76)
T 1hry_A 35 ISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYK 73 (76)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 689999999999999999999999999999999999885
No 51
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=98.35 E-value=8.7e-08 Score=71.84 Aligned_cols=39 Identities=28% Similarity=0.608 Sum_probs=34.8
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|+++|..++++|.++|..|+
T Consensus 33 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~YK 71 (71)
T 4a3n_A 33 LSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYK 71 (71)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCcCcC
Confidence 589999999999999999999999999999999998874
No 52
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.34 E-value=3e-07 Score=74.79 Aligned_cols=40 Identities=35% Similarity=0.672 Sum_probs=38.3
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+++||++|++||+++|++|+++|..++++|.++|..|+.
T Consensus 48 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~ 87 (102)
T 2co9_A 48 VSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRA 87 (102)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999964
No 53
>1v64_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.33 E-value=2.5e-07 Score=76.60 Aligned_cols=40 Identities=30% Similarity=0.467 Sum_probs=38.2
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+|+||++|++||++||++|+++|+.++++|.++|..|..
T Consensus 44 isk~lg~~Wk~Ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 83 (108)
T 1v64_A 44 RMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLE 83 (108)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999999965
No 54
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.28 E-value=3.4e-07 Score=71.83 Aligned_cols=39 Identities=21% Similarity=0.415 Sum_probs=37.7
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|.++|..++++|.++|..|+
T Consensus 33 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk 71 (86)
T 2lef_A 33 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS 71 (86)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 689999999999999999999999999999999999996
No 55
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=98.27 E-value=3.5e-07 Score=71.77 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=37.5
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|.++|..++++|..+|..|+
T Consensus 35 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk 73 (85)
T 1j46_A 35 ISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYK 73 (85)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCcccc
Confidence 689999999999999999999999999999999999985
No 56
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=98.27 E-value=2.9e-07 Score=71.40 Aligned_cols=39 Identities=28% Similarity=0.608 Sum_probs=37.4
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|.++|..++++|.++|..|+
T Consensus 37 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yk 75 (83)
T 3f27_D 37 LSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYK 75 (83)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 689999999999999999999999999999999999985
No 57
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=98.26 E-value=1.4e-07 Score=73.32 Aligned_cols=39 Identities=33% Similarity=0.467 Sum_probs=37.3
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+|+||++|++||+++|++|+++|+.++++|.++|..|+
T Consensus 38 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~yk 76 (82)
T 1wz6_A 38 ATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYR 76 (82)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHCCSCSSCC
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 589999999999999999999999999999999999886
No 58
>1cg7_A Protein (NON histone protein 6 A); HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.21.1.1 PDB: 1j5n_A 1lwm_A
Probab=98.25 E-value=2.4e-07 Score=74.12 Aligned_cols=40 Identities=43% Similarity=0.727 Sum_probs=38.1
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+++||++|++||+++|++|+++|..++++|.++|..|..
T Consensus 51 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~Y~~ 90 (93)
T 1cg7_A 51 VGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYNA 90 (93)
T ss_dssp HTTTHHHHHHTTHHHHHHHHHHHHTTHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999964
No 59
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=98.24 E-value=3.1e-07 Score=70.42 Aligned_cols=39 Identities=23% Similarity=0.432 Sum_probs=37.3
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|.++|..++++|.+++..|+
T Consensus 33 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~p~Yk 71 (79)
T 3u2b_C 33 ISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYK 71 (79)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 689999999999999999999999999999999999885
No 60
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=98.22 E-value=5.1e-07 Score=74.17 Aligned_cols=39 Identities=26% Similarity=0.496 Sum_probs=37.4
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+|+||++|+.||+++|++|+++|.+++++|.++|..|+
T Consensus 60 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Yk 98 (106)
T 4euw_A 60 LSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYK 98 (106)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 689999999999999999999999999999999999985
No 61
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=98.22 E-value=4.4e-07 Score=69.21 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=35.9
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+|+||++|++||+ |++|+++|.+++++|.++|..|+.
T Consensus 34 isk~lg~~Wk~ls~--K~~y~~~A~~~k~~y~~~~~~Y~~ 71 (73)
T 3nm9_A 34 VAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAVKEFEA 71 (73)
T ss_dssp HHHHHHHHHHHCSC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCc--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999998 999999999999999999999964
No 62
>1wxl_A Single-strand recognition protein; FACT, SSRP1, HMG, DNA binding protein; NMR {Drosophila melanogaster}
Probab=98.19 E-value=4.8e-07 Score=69.02 Aligned_cols=38 Identities=34% Similarity=0.677 Sum_probs=36.1
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+|+||++|++| ++|++|+++|..++++|.++|..|+.
T Consensus 34 isk~lg~~Wk~l--~eK~~y~~~A~~~k~~y~~e~~~Y~~ 71 (73)
T 1wxl_A 34 IAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYKP 71 (73)
T ss_dssp HHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHTTTGGGTT
T ss_pred HHHHHHHHHHhh--HhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 589999999999 99999999999999999999999975
No 63
>2lhj_A High mobility group protein homolog NHP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; NMR {Babesia bovis}
Probab=98.19 E-value=2.1e-07 Score=74.82 Aligned_cols=40 Identities=35% Similarity=0.613 Sum_probs=38.1
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 40 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~ 40 (382)
|+++||++|++||+++|++|+++|..++++|.++|..|+.
T Consensus 55 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~y~~ 94 (97)
T 2lhj_A 55 IGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQ 94 (97)
T ss_dssp HHHHHHHTSSSSCSTTTSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999964
No 64
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=98.14 E-value=6.5e-07 Score=70.65 Aligned_cols=39 Identities=18% Similarity=0.345 Sum_probs=36.6
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+|+||++|++||+++|++|+++|++++++|.+++-+|+
T Consensus 48 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~P~Yk 86 (87)
T 2e6o_A 48 ISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCW 86 (87)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 689999999999999999999999999999999987774
No 65
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.09 E-value=6.9e-07 Score=69.23 Aligned_cols=39 Identities=26% Similarity=0.503 Sum_probs=36.3
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 39 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk 39 (382)
|+++||++|++||+++|++|.++|.+++++|.+++-.|+
T Consensus 35 isk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~p~Yk 73 (81)
T 1i11_A 35 ISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK 73 (81)
T ss_dssp HHHHHHHHHTTSCSGGGHHHHHHHHHHHHHHHTTCSCC-
T ss_pred HHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 689999999999999999999999999999999998874
No 66
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.04 E-value=1.8e-06 Score=70.46 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=35.0
Q ss_pred hhhhh--HHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHH
Q psy1990 47 YLILL--FFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREE 88 (382)
Q Consensus 47 fPglS--ftEIsK~LGErWK~LSdEEKqpYedkAekdKeRYekE 88 (382)
||+++ ++||+ ++|++|++++|+||+++|+++|++|..+
T Consensus 45 nP~~s~~~~eIs----e~Wk~ls~eeK~pY~~kA~~~K~~h~~~ 84 (90)
T 2yuk_A 45 FPDWTTRVKQIA----KLWRKASSQERAPYVQKARDNRAALRIN 84 (90)
T ss_dssp CCSHHHHHHHHH----HHHHHSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CcCccchHHHHH----HHHHcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 57888 99998 9999999999999999999999999763
No 67
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=97.97 E-value=3.8e-07 Score=72.53 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=35.1
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 38 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeY 38 (382)
|+|+||++|++||+++|++|+++|..++++|.++|..+
T Consensus 51 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~~ 88 (90)
T 1wgf_A 51 LTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSGPS 88 (90)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTCCCCSSC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999887653
No 68
>2cto_A Novel protein; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=4.1e-06 Score=68.43 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=33.5
Q ss_pred CcchH---HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHh
Q psy1990 1 VTKLL---GNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 37 (382)
Q Consensus 1 ISKiL---GEkWK~LSdeEKqkYedkAkeDKeRYeeEMee 37 (382)
|+|+| |++|++|+++||++|+++|.++|++|.+++..
T Consensus 39 isK~l~~cGe~Wk~ls~eEK~pYe~~A~~~K~~y~kd~~~ 78 (93)
T 2cto_A 39 VADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDPGP 78 (93)
T ss_dssp HHHHTGGGHHHHHHSCHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccccc
Confidence 46677 99999999999999999999999999988754
No 69
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.19 E-value=8.1e-05 Score=58.90 Aligned_cols=28 Identities=25% Similarity=0.269 Sum_probs=26.2
Q ss_pred CcchHHHHhcCCChHHHHHHHHHHHHHH
Q psy1990 1 VTKLLGNEWSKLSLPEKKVYLDRAEVDK 28 (382)
Q Consensus 1 ISKiLGEkWK~LSdeEKqkYedkAkeDK 28 (382)
|+|+||++|++||+++|++|+++|+.+.
T Consensus 37 isK~lge~Wk~ls~eeK~~y~~~A~~d~ 64 (81)
T 2d7l_A 37 IIKEGMIRFRVLSTEERKVWANKAKGET 64 (81)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999874
No 70
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=96.68 E-value=0.001 Score=54.23 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=28.5
Q ss_pred chHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q psy1990 3 KLLGNEWSKLSLPEKKVYLDRAEVDKKRYREE 34 (382)
Q Consensus 3 KiLGEkWK~LSdeEKqkYedkAkeDKeRYeeE 34 (382)
..|+++|+.|++++|++|+++|.++|++|..+
T Consensus 53 ~eIse~Wk~ls~eeK~pY~~kA~~~K~~h~~~ 84 (90)
T 2yuk_A 53 KQIAKLWRKASSQERAPYVQKARDNRAALRIN 84 (90)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 45679999999999999999999999999643
No 71
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=96.36 E-value=0.00069 Score=57.20 Aligned_cols=36 Identities=19% Similarity=0.467 Sum_probs=33.1
Q ss_pred CCcchhhhhhhhhhhhhhhhhhhhhchhhhHHhhhh
Q psy1990 161 EDNEELYCRVCDQWFTTLHNKREHLNGRQHFQAVEQ 196 (382)
Q Consensus 161 ~d~~~~~c~~c~q~fs~~hnk~eh~~~~~h~~~~~~ 196 (382)
..+...||.+|+.+|+|.....-|+.||.|..+|..
T Consensus 89 ~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~~ 124 (127)
T 1zu1_A 89 GEDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRL 124 (127)
T ss_dssp CCCTTTEETTTTEECSSHHHHHHHHTSHHHHHHHHH
T ss_pred CCCCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHHH
Confidence 467789999999999999999999999999998864
No 72
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=95.73 E-value=0.003 Score=54.38 Aligned_cols=44 Identities=18% Similarity=0.382 Sum_probs=38.4
Q ss_pred cccccCCcchhhhhhhhhhhhhhhhhhhhhchhhhHHhhhhccc
Q psy1990 156 IDEEEEDNEELYCRVCDQWFTTLHNKREHLNGRQHFQAVEQSGH 199 (382)
Q Consensus 156 ~d~~~~d~~~~~c~~c~q~fs~~hnk~eh~~~~~h~~~~~~~~~ 199 (382)
.|+|=+.....||-+|+.+|++..++.-|+.++.|...|..--+
T Consensus 41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l~~ 84 (124)
T 1zr9_A 41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSV 84 (124)
T ss_dssp SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHHTS
T ss_pred ccccCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHhcc
Confidence 45566777889999999999999999999999999999887543
No 73
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=94.22 E-value=0.0065 Score=51.20 Aligned_cols=41 Identities=22% Similarity=0.383 Sum_probs=34.0
Q ss_pred ccccCCcchhhhhhhhhhhhhhhhhhhhhchhhhHHhhhhc
Q psy1990 157 DEEEEDNEELYCRVCDQWFTTLHNKREHLNGRQHFQAVEQS 197 (382)
Q Consensus 157 d~~~~d~~~~~c~~c~q~fs~~hnk~eh~~~~~h~~~~~~~ 197 (382)
.|..+-...+||.+|+..|.|....+.|+.|+.|..+|...
T Consensus 24 ~e~~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~ 64 (127)
T 1zu1_A 24 RENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRY 64 (127)
T ss_dssp HHTTTTBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHH
T ss_pred ccccccCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHH
Confidence 33334456699999999999999999999999999987643
No 74
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=93.16 E-value=0.017 Score=46.31 Aligned_cols=33 Identities=27% Similarity=0.669 Sum_probs=29.2
Q ss_pred hhhhhhhhhh--hhhhhhhhhhchhhhHHhhhhcc
Q psy1990 166 LYCRVCDQWF--TTLHNKREHLNGRQHFQAVEQSG 198 (382)
Q Consensus 166 ~~c~~c~q~f--s~~hnk~eh~~~~~h~~~~~~~~ 198 (382)
-||..|+-|| .|...-+.|..|++|..++..++
T Consensus 4 YyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~yy 38 (77)
T 3cw1_L 4 FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYY 38 (77)
T ss_pred cccccCCceecCCCHHHHHHHHccHHHHHHHHHHH
Confidence 4899999999 45666889999999999999888
No 75
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=88.49 E-value=0.28 Score=49.29 Aligned_cols=34 Identities=29% Similarity=0.690 Sum_probs=30.8
Q ss_pred cchhhhhhhhhhhhhhhhhhhhhchhhhHHhhhh
Q psy1990 163 NEELYCRVCDQWFTTLHNKREHLNGRQHFQAVEQ 196 (382)
Q Consensus 163 ~~~~~c~~c~q~fs~~hnk~eh~~~~~h~~~~~~ 196 (382)
.+.+||..|..+|++..-...||.|+.|..++..
T Consensus 290 ~~~l~C~~c~K~Fs~~~v~~~hL~GKkh~K~~~~ 323 (402)
T 4dgw_A 290 AKGIYCPFCSRWFKTSSVFESHLVGKIHKKNESK 323 (402)
T ss_dssp TTEECBTTTTBCBSSHHHHHTTSSSHHHHHHHHH
T ss_pred CcCeeehhhhhhhccccccHHHhcccccchhHHH
Confidence 4579999999999999999999999999998654
No 76
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=86.53 E-value=0.13 Score=29.40 Aligned_cols=20 Identities=20% Similarity=0.551 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 4 VCERCGKRFVQSSQLANHIR 23 (26)
Confidence 49999999999999999984
No 77
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=83.98 E-value=0.22 Score=28.92 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 359999999999999999984
No 78
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=83.06 E-value=0.17 Score=29.10 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 4 VCEVCTRAFARQEHLKRHYR 23 (29)
T ss_dssp BCTTTCCBCSSHHHHHHHHH
T ss_pred ECCCCCcccCCHHHHHHHHH
Confidence 49999999999999999974
No 79
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=82.45 E-value=0.2 Score=30.58 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 4 ACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCcccCCHHHHHHHHH
Confidence 49999999999999999984
No 80
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=82.20 E-value=0.15 Score=29.50 Aligned_cols=20 Identities=30% Similarity=0.688 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.|+.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 5 SCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp ECSSSCCEESCHHHHHHHHT
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 49999999999999999974
No 81
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=81.94 E-value=0.19 Score=29.30 Aligned_cols=20 Identities=20% Similarity=0.529 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 5 RCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp EETTTTEEESCHHHHHHHHT
T ss_pred CCCCCCcccCCHHHHHHHHH
Confidence 49999999999999999984
No 82
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=81.63 E-value=0.3 Score=37.07 Aligned_cols=32 Identities=22% Similarity=0.504 Sum_probs=29.4
Q ss_pred hhhhhhhhhhhhhhhhhhhchhhhHHhhhhcc
Q psy1990 167 YCRVCDQWFTTLHNKREHLNGRQHFQAVEQSG 198 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~~~~h~~~~~~~~ 198 (382)
-|..|+-.|+..--.|.|++.+||+..|....
T Consensus 15 eC~lC~vkYs~r~slqDHIFs~qHI~~vk~~v 46 (55)
T 2yrk_A 15 ECTLCGVKYSARLSIRDHIFSKQHISKVRETV 46 (55)
T ss_dssp CCTTTTCCCCSSSCHHHHHTSHHHHHHHHHTT
T ss_pred cccccCcccccccchhhhhccHHHHHHHHHHH
Confidence 59999999999999999999999999987654
No 83
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=82.12 E-value=0.3 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.456 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|..|+..|++..+++.|+.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 4 YVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 359999999999999999984
No 84
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=80.74 E-value=0.22 Score=28.53 Aligned_cols=20 Identities=45% Similarity=0.770 Sum_probs=18.1
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 4 KCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp ECTTTSCEESCHHHHHHHHH
T ss_pred cCCCCCCccCChhHHHHHHH
Confidence 49999999999999999974
No 85
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=80.28 E-value=0.22 Score=28.40 Aligned_cols=20 Identities=20% Similarity=0.496 Sum_probs=18.0
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 3 ~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 3 KCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp BCSSSCCBCSSHHHHHHHGG
T ss_pred cCCCCCCcCCCHHHHHHHHH
Confidence 38999999999999999983
No 86
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.00 E-value=0.26 Score=30.42 Aligned_cols=21 Identities=24% Similarity=0.586 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (37)
T 2elo_A 10 YSCPVCEKSFSEDRLIKSHIK 30 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 87
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=79.22 E-value=0.22 Score=30.13 Aligned_cols=21 Identities=24% Similarity=0.532 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.|+.
T Consensus 8 ~~C~~C~k~f~~~~~L~~H~~ 28 (35)
T 2elx_A 8 YVCALCLKKFVSSIRLRSHIR 28 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCcchhCCHHHHHHHHH
Confidence 469999999999999999974
No 88
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=79.12 E-value=0.26 Score=28.30 Aligned_cols=20 Identities=30% Similarity=0.630 Sum_probs=18.1
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.||.
T Consensus 5 ~C~~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 5 QCDYCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp ECTTTCCEESCHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 49999999999999999974
No 89
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=78.20 E-value=0.24 Score=28.48 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=18.1
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.||.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 5 SCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp ECSSSSCEESSHHHHHHHHH
T ss_pred cCCCcChhhCCHHHHHHHHH
Confidence 49999999999999999973
No 90
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=77.67 E-value=0.28 Score=30.21 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCCchhCCHHHHHHHHH
Confidence 48999999999999999984
No 91
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=77.17 E-value=0.27 Score=28.35 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.||.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHT
T ss_pred cCCCCCchhCCHHHHHHHHH
Confidence 48999999999999999984
No 92
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=76.99 E-value=0.28 Score=29.85 Aligned_cols=21 Identities=43% Similarity=0.714 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 8 ~~C~~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 8 FVCRICLSAFTTKANCARHLK 28 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 93
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.90 E-value=0.34 Score=29.76 Aligned_cols=21 Identities=29% Similarity=0.681 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 10 FTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EECCCCCceeCCHHHHHHHHH
Confidence 459999999999999999984
No 94
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.81 E-value=0.29 Score=30.09 Aligned_cols=21 Identities=24% Similarity=0.567 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 10 FKCSLCEYATRSKSNLKAHMN 30 (36)
T ss_dssp EECSSSSCEESCHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 95
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.72 E-value=0.37 Score=29.35 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 10 HLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eecCcCCCCcCchHHHHHHHH
Confidence 469999999999999999973
No 96
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.31 E-value=0.31 Score=29.76 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 10 YKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999983
No 97
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=76.31 E-value=0.36 Score=30.37 Aligned_cols=21 Identities=24% Similarity=0.563 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 7 ~~C~~C~k~f~~~~~L~~H~~ 27 (39)
T 1njq_A 7 YTCSFCKREFRSAQALGGHMN 27 (39)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 98
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.88 E-value=0.32 Score=29.91 Aligned_cols=21 Identities=19% Similarity=0.608 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elv_A 10 YDCHICERKFKNELDRDRHML 30 (36)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 469999999999999999984
No 99
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=75.82 E-value=0.34 Score=27.55 Aligned_cols=20 Identities=35% Similarity=0.730 Sum_probs=17.9
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 4 KCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCSSCCCCCCTTTHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 48999999999999999984
No 100
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=74.85 E-value=0.44 Score=31.94 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=18.5
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
--|..|+..|++..+++-||
T Consensus 9 ~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 9 FMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CEETTTTEECSCHHHHHHHH
T ss_pred eECCCCCCccCCHhHccCcC
Confidence 35999999999999999998
No 101
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.57 E-value=0.35 Score=29.86 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhh-hhhhhhhc
Q psy1990 166 LYCRVCDQWFTTL-HNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~-hnk~eh~~ 186 (382)
.-|.+|+..|++. .+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 10 MKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp EECSSSSCEECSSCHHHHHHHH
T ss_pred eECCCCChhhccCHHHHHHHHH
Confidence 4699999999999 99999983
No 102
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.50 E-value=0.54 Score=29.72 Aligned_cols=21 Identities=19% Similarity=0.414 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 12 YRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp BCCTTTTCCBSSHHHHHTTGG
T ss_pred eeCCCccchhCCHHHHHHHHH
Confidence 459999999999999999984
No 103
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=74.00 E-value=0.49 Score=29.10 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~ 32 (37)
T 1p7a_A 12 FQCPDCDRSFSRSDHLALHRK 32 (37)
T ss_dssp BCCTTTCCCBSSHHHHHHHHG
T ss_pred ccCCCCCcccCcHHHHHHHHH
Confidence 469999999999999999974
No 104
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=73.83 E-value=0.39 Score=27.50 Aligned_cols=20 Identities=20% Similarity=0.494 Sum_probs=18.0
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 4 QCQYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp CCSSSSCCCSCSHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHH
Confidence 48999999999999999974
No 105
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=73.43 E-value=0.51 Score=27.32 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=17.4
Q ss_pred hhhhhhhhhhhhhhhhhhh
Q psy1990 167 YCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~ 185 (382)
-|..|+..|++..+++.||
T Consensus 4 ~C~~C~k~f~~~~~l~~H~ 22 (30)
T 1paa_A 4 ACGLCNRAFTRRDLLIRHA 22 (30)
T ss_dssp BCTTTCCBCSSSHHHHHHH
T ss_pred CCcccCcccCChHHHHHHH
Confidence 4999999999999999995
No 106
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.02 E-value=0.56 Score=30.40 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (45)
T 2epu_A 13 FECTHCGKSFRAKGNLVTHQR 33 (45)
T ss_dssp EEETTTTEEESSHHHHHHHHT
T ss_pred ccCCCCCCccCChHHHHHHHH
Confidence 459999999999999999984
No 107
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.99 E-value=0.58 Score=29.54 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 11 YSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999974
No 108
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.89 E-value=0.59 Score=30.31 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emg_A 13 FICSECGKVFTHKTNLIIHQK 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHT
T ss_pred EECCccCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 109
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.78 E-value=0.66 Score=29.99 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq4_A 13 YNCKECGKSFSRAPCLLKHER 33 (46)
T ss_dssp CCBTTTTBCCSCHHHHHHHHH
T ss_pred eECCCCCCccCchHHHHHHHH
Confidence 469999999999999999984
No 110
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.71 E-value=0.57 Score=29.71 Aligned_cols=21 Identities=24% Similarity=0.575 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2en2_A 12 YKCETCGARFVQVAHLRAHVL 32 (42)
T ss_dssp EECTTTCCEESSHHHHHHHTH
T ss_pred EeCCCcChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 111
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.49 E-value=0.63 Score=30.27 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enh_A 13 YECDVCRKAFSHHASLTQHQR 33 (46)
T ss_dssp CBCTTTCCBCSSSHHHHHHGG
T ss_pred cCCCCcCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 112
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=71.36 E-value=0.58 Score=31.44 Aligned_cols=21 Identities=14% Similarity=0.431 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EECCCcCcccCCHHHHHHHhh
Confidence 459999999999999999984
No 113
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.27 E-value=0.61 Score=29.86 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eoj_A 13 YECCECGKVFSRKDQLVSHQK 33 (44)
T ss_dssp CEETTTTEECSSHHHHHHHHT
T ss_pred eeCCCCCCccCCHHHHHHHHH
Confidence 469999999999999999985
No 114
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.17 E-value=0.59 Score=30.02 Aligned_cols=21 Identities=24% Similarity=0.548 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2eox_A 13 YNCNECGKAFTRIFHLTRHQK 33 (44)
T ss_dssp EEETTTTEEESSSHHHHTTHH
T ss_pred eECcccCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 115
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.12 E-value=0.62 Score=30.04 Aligned_cols=21 Identities=24% Similarity=0.351 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eou_A 13 SECQECGKIFRHSSLLIEHQA 33 (44)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 116
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.69 E-value=0.6 Score=29.78 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eof_A 13 YECNECQKAFNTKSNLMVHQR 33 (44)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCCCcccCCHhHHHHHHH
Confidence 469999999999999999984
No 117
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=70.52 E-value=0.62 Score=31.65 Aligned_cols=21 Identities=29% Similarity=0.532 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 25 ~~C~~C~k~f~~~~~L~~H~~ 45 (54)
T 1yui_A 25 ATCPICYAVIRQSRNLRRHLE 45 (54)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 118
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.38 E-value=0.65 Score=29.60 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 13 YVCNECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp SCCTTTCCCCSSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHhh
Confidence 469999999999999999984
No 119
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.38 E-value=0.58 Score=30.57 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eon_A 13 YKCQVCGKAFRVSSHLVQHHS 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHTT
T ss_pred cCCCCCCcccCcHHHHHHHHH
Confidence 459999999999999999984
No 120
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=69.86 E-value=0.54 Score=29.70 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 12 YLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHhh
Confidence 569999999999999999984
No 121
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.76 E-value=0.65 Score=29.99 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eor_A 13 YNCEECGKAFIHDSQLQEHQR 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred ccCCCCCCCcCCHHHHHHHHH
Confidence 569999999999999999984
No 122
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.65 E-value=0.61 Score=29.67 Aligned_cols=21 Identities=29% Similarity=0.717 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2eos_A 12 YPCEICGTRFRHLQTLKSHLR 32 (42)
T ss_dssp BCCSSSCCCBSSHHHHHHHTT
T ss_pred EECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999985
No 123
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.40 E-value=0.73 Score=29.87 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2epz_A 13 FDCIDCGKAFSDHIGLNQHRR 33 (46)
T ss_dssp BCCTTTCCCBSSHHHHHHHHT
T ss_pred eECCCCCceeCCHHHHHHHHH
Confidence 469999999999999999985
No 124
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.28 E-value=0.73 Score=29.96 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en9_A 13 FKCNECKKTFTQSSSLTVHQR 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred EECCccCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 125
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.27 E-value=0.61 Score=30.47 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eom_A 13 HRCSDCGKFFLQASNFIQHRR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCCCCeeCChHHHHHHHH
Confidence 469999999999999999974
No 126
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.99 E-value=0.63 Score=30.05 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (43)
T 2yrm_A 11 FFCNECDCRFSEEASLKRHTL 31 (43)
T ss_dssp BCCSSSCCCBSSHHHHHHHHH
T ss_pred EECCCCCCeeCChHHHHHHHH
Confidence 469999999999999999984
No 127
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=68.95 E-value=0.58 Score=29.65 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2el5_A 11 YECSECGKAFNRKDQLISHQR 31 (42)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred ccCCCcChhhCCHHHHHHHHH
Confidence 469999999999999999984
No 128
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.75 E-value=0.81 Score=29.64 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq1_A 13 YKCNECGKAFRAHSNLTTHQV 33 (46)
T ss_dssp CCCTTTTCCCSSHHHHHHHHT
T ss_pred eECCcCChhhCCHHHHHHHHH
Confidence 469999999999999999984
No 129
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.62 E-value=0.74 Score=29.54 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2emb_A 13 YECSKCQATFNLRKHLIQHQK 33 (44)
T ss_dssp EECTTTCCEESCHHHHHHHGG
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 469999999999999999984
No 130
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.58 E-value=0.65 Score=30.11 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enf_A 13 YKCNECGKVFTQNSHLVRHRG 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHT
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 131
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.39 E-value=0.61 Score=30.13 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytf_A 13 FECSECQKAFNTKSNLIVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 132
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.38 E-value=0.61 Score=30.13 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yrj_A 13 YRCGECGKAFAQKANLTQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 469999999999999999984
No 133
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.32 E-value=0.64 Score=29.40 Aligned_cols=21 Identities=19% Similarity=0.331 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 11 YECQECGKSFRQKGSLTLHER 31 (41)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred eECCCCCCCcCCHHHHHHHHH
Confidence 459999999999999999984
No 134
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.97 E-value=0.67 Score=29.95 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep1_A 13 YECSDCGKSFIKKSQLHVHQR 33 (46)
T ss_dssp SCCSSSCCCCSSHHHHHHHHG
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 469999999999999999985
No 135
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.94 E-value=0.71 Score=29.82 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eow_A 13 YKCNECGKAFRARSSLAIHQA 33 (46)
T ss_dssp EECTTSCCEESSHHHHHHHHH
T ss_pred eeccccCChhcCHHHHHHHHH
Confidence 459999999999999999984
No 136
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.92 E-value=0.75 Score=29.90 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yth_A 13 FQCEECGKRFTQNSHLHSHQR 33 (46)
T ss_dssp BCCSSSCCCBSSHHHHHHHGG
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 137
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=67.75 E-value=0.65 Score=30.20 Aligned_cols=21 Identities=19% Similarity=0.418 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emj_A 13 FECAECGKSFSISSQLATHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred EECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 138
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.64 E-value=0.92 Score=29.57 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytm_A 13 YKCMECGKAFGDNSSCTQHQR 33 (46)
T ss_dssp SSBTTTTBCCSSHHHHHHHHH
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 139
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.50 E-value=0.82 Score=29.51 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq3_A 13 YECNQCGKAFSVRSSLTTHQA 33 (46)
T ss_dssp SEETTTTEECSSHHHHHHHHT
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 469999999999999999984
No 140
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.36 E-value=0.66 Score=30.20 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoy_A 13 FKCNKCEKTFSCSKYLTQHER 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHT
T ss_pred EECcCCCCcCCCHHHHHHHHH
Confidence 459999999999999999983
No 141
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.36 E-value=0.66 Score=30.17 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytp_A 13 YECSECGKAFARKSTLIMHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCcCCcccCCHHHHHHHHH
Confidence 459999999999999999985
No 142
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.18 E-value=0.72 Score=29.98 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em6_A 13 YKCDVCGKEFSQSSHLQTHQR 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHT
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999974
No 143
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.16 E-value=0.71 Score=30.02 Aligned_cols=21 Identities=19% Similarity=0.507 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoh_A 13 YECKECRKTFIQIGHLNQHKR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCcCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 144
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.99 E-value=0.68 Score=29.93 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2epv_A 13 YECNECGKAFIWKSLLIVHER 33 (44)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eECCCCCcccCchHHHHHHHh
Confidence 469999999999999999984
No 145
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.97 E-value=0.83 Score=29.69 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoz_A 13 YSCNVCGKAFVLSAHLNQHLR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHHH
T ss_pred eECcccChhhCCHHHHHHHHH
Confidence 459999999999999999974
No 146
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.78 E-value=0.72 Score=29.88 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emi_A 13 YECSECGKAFIQKSTLSMHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred CCCCCCCcccCCHHHHHHHHh
Confidence 469999999999999999974
No 147
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.76 E-value=0.75 Score=29.80 Aligned_cols=21 Identities=19% Similarity=0.444 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq2_A 13 YQCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp SSCCSSCCCCSSHHHHHHHGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 148
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.61 E-value=0.74 Score=29.84 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2yti_A 13 YKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp TCCSSSCCCCSSHHHHHHHHT
T ss_pred eECCCCCcccCChhHHHHHhH
Confidence 469999999999999999983
No 149
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.37 E-value=0.92 Score=29.37 Aligned_cols=21 Identities=14% Similarity=0.398 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytg_A 13 FKCGECGKSYNQRVHLTQHQR 33 (46)
T ss_dssp EECTTTCCEESSSHHHHTTGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 150
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.34 E-value=0.75 Score=29.90 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emz_A 13 FKCNECGKGFGRRSHLAGHLR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 151
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.25 E-value=0.9 Score=29.31 Aligned_cols=21 Identities=19% Similarity=0.437 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytr_A 13 YKCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp TCCTTTCCCCSSHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 569999999999999999984
No 152
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.18 E-value=0.72 Score=29.98 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em4_A 13 YECIECGKAFKTKSSLICHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 469999999999999999974
No 153
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.95 E-value=0.73 Score=29.87 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en3_A 13 FQCKECGMNFSWSCSLFKHLR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH
T ss_pred eeCcccChhhCCHHHHHHHHH
Confidence 459999999999999999983
No 154
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.84 E-value=0.77 Score=29.63 Aligned_cols=21 Identities=19% Similarity=0.429 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yts_A 13 YICNECGKSFIQKSHLNRHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred EECCCCChhhCChHHHHHHHH
Confidence 469999999999999999984
No 155
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.82 E-value=0.89 Score=29.43 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ysp_A 13 YKCEKCGKGYNSKFNLDMHQK 33 (46)
T ss_dssp EEETTTTEEESCHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 469999999999999999985
No 156
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.80 E-value=0.89 Score=29.34 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eme_A 13 YVCDYCGKAFGLSAELVRHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 569999999999999999984
No 157
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.55 E-value=0.76 Score=29.79 Aligned_cols=21 Identities=29% Similarity=0.585 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em3_A 13 YECKVCSKAFTQKAHLAQHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999983
No 158
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.37 E-value=0.76 Score=29.66 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emm_A 13 HKCNECGKSFIQSAHLIQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eeCCCCChhhCCHHHHHHHHH
Confidence 569999999999999999984
No 159
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.23 E-value=1 Score=29.12 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytn_A 13 YKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHGG
T ss_pred eECCCCCCeeCCHHHHHHHhh
Confidence 459999999999999999984
No 160
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.20 E-value=0.78 Score=29.43 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (44)
T 2emx_A 11 FGCSCCEKAFSSKSYLLVHQQ 31 (44)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 161
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.15 E-value=0.78 Score=29.73 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep0_A 13 YKCDVCHKSFRYGSSLTVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eeCcccCcccCChHHHHHHHH
Confidence 469999999999999999984
No 162
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=65.08 E-value=0.88 Score=29.57 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ely_A 13 FKCVECGKGFSRRSALNVHHK 33 (46)
T ss_dssp BCCSSSCCCBSSTTHHHHHHH
T ss_pred cccCccCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 163
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.99 E-value=0.93 Score=29.34 Aligned_cols=21 Identities=33% Similarity=0.577 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emh_A 13 YICTVCGKAFTDRSNLIKHQK 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 164
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.93 E-value=0.94 Score=29.33 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yso_A 13 HQCRECGEIFFQYVSLIEHQV 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EEccccChhhCCHHHHHHHHH
Confidence 469999999999999999984
No 165
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.88 E-value=0.94 Score=29.32 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eq0_A 13 YKCHECGKVFRRNSHLARHQL 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 166
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.78 E-value=0.75 Score=28.70 Aligned_cols=19 Identities=26% Similarity=0.490 Sum_probs=17.5
Q ss_pred hhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREH 184 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh 184 (382)
.-|..|+..|++..+++.|
T Consensus 10 ~~C~~C~k~f~~~~~L~~H 28 (37)
T 2elm_A 10 YYCSQCHYSSITKNCLKRH 28 (37)
T ss_dssp EECSSSSCEEECHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHH
Confidence 4599999999999999999
No 167
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.78 E-value=1 Score=29.15 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en1_A 13 FKCEECGKRFTQNSQLHSHQR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHGG
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 168
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.77 E-value=0.87 Score=29.59 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emf_A 13 FECTECGKAFTRKSTLSMHQK 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 169
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=64.75 E-value=0.85 Score=26.94 Aligned_cols=19 Identities=26% Similarity=0.601 Sum_probs=17.2
Q ss_pred hh--hhhhhhhhhhhhhhhhc
Q psy1990 168 CR--VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 168 c~--~c~q~fs~~hnk~eh~~ 186 (382)
|. .|+..|++..+++.||.
T Consensus 5 C~~~~C~k~f~~~~~L~~H~~ 25 (31)
T 1sp2_A 5 CTWSYCGKRFTRSDELQRHKR 25 (31)
T ss_dssp CCSTTCCCBCSSHHHHHHHHT
T ss_pred CcCCCCCcccCCHhHHHHHHH
Confidence 76 89999999999999984
No 170
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=64.73 E-value=0.84 Score=29.46 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em9_A 13 YNCKECGKSFRWASCLLKHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred eECCccccccCChHHHHHHHH
Confidence 469999999999999999984
No 171
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.72 E-value=0.97 Score=29.24 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en6_A 13 YGCNECGKTFSQKSILSAHQR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHHH
T ss_pred eECCCCCcccCchHHHHHHHH
Confidence 459999999999999999984
No 172
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.70 E-value=0.8 Score=29.76 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em2_A 13 FKCKECGKAFRQNIHLASHLR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EECCcCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 173
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.58 E-value=0.81 Score=29.36 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 13 FKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp EECSSSSCEESSSHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHhH
Confidence 459999999999999999984
No 174
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.47 E-value=1 Score=29.05 Aligned_cols=21 Identities=24% Similarity=0.456 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoe_A 13 YKCNECGKVFTQNSHLANHQR 33 (46)
T ss_dssp SEETTTTEECSSHHHHHHHHG
T ss_pred eECCCcChhhCCHHHHHHHHH
Confidence 569999999999999999983
No 175
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.47 E-value=0.82 Score=29.62 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep3_A 13 YRCAECGKAFTDRSNLFTHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 176
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.45 E-value=1 Score=29.00 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eop_A 13 HECRECGKSFSFNSQLIVHQR 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHT
T ss_pred eeCCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 177
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.23 E-value=0.83 Score=29.69 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em8_A 13 YKCVECGKGYKRRLDLDFHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECcccCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 178
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=64.13 E-value=1.3 Score=32.39 Aligned_cols=20 Identities=25% Similarity=0.527 Sum_probs=16.5
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
--|.+|+..|++..+++.||
T Consensus 33 ~~C~~C~k~F~~~~~L~~H~ 52 (60)
T 4gzn_C 33 RSCPECGKCFRDQSEVNRHL 52 (60)
T ss_dssp EECTTTCCEESSHHHHHHHG
T ss_pred eECCCCCCCcCCHHHHHHHh
Confidence 34888888888888888887
No 179
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.13 E-value=0.83 Score=29.57 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emy_A 13 YECHECGKAFSRKYQLISHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCcHHHHHHHHH
Confidence 569999999999999999984
No 180
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=63.96 E-value=0.93 Score=29.34 Aligned_cols=21 Identities=38% Similarity=0.662 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em0_A 13 WKCRECDMCFSQASSLRLHQN 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 181
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.91 E-value=0.88 Score=29.46 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em7_A 13 YKCEECGKGFICRRDLYTHHM 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHGG
T ss_pred ccCCCccchhCCHHHHHHHHH
Confidence 469999999999999999984
No 182
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.78 E-value=0.96 Score=29.36 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2elz_A 13 YKCEDCGKGYNRRLNLDMHQR 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred eeCcccCchhCCHHHHHHHHH
Confidence 469999999999999999985
No 183
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.65 E-value=0.86 Score=29.50 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytj_A 13 YICAECGKAFTIRSNLIKHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 569999999999999999984
No 184
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=63.60 E-value=1.2 Score=29.44 Aligned_cols=22 Identities=18% Similarity=0.526 Sum_probs=19.5
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKL 33 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 3569999999999999999984
No 185
>4f9c_B Protein DBF4 homolog A; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_B* 4f9b_B* 4f9a_B*
Probab=63.59 E-value=1.2 Score=38.75 Aligned_cols=28 Identities=32% Similarity=0.548 Sum_probs=23.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhhchhhhHHhhh
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLNGRQHFQAVE 195 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~~~~h~~~~~ 195 (382)
--||-+|...|..+. +|+.+++|+..++
T Consensus 87 ~GyCE~C~~~y~~l~---~H~~s~~Hr~fa~ 114 (144)
T 4f9c_B 87 KGYCECCLQKYEDLE---THLLSEQHRNFAQ 114 (144)
T ss_dssp -CEETTTTEECSCHH---HHHHSHHHHHHHT
T ss_pred CCCccchhhhhhhHH---HHcCCHHHHHHHh
Confidence 359999999998654 9999999987764
No 186
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=63.55 E-value=1.2 Score=31.80 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=10.8
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
.-|.+|+..|++..+++.||
T Consensus 18 ~~C~~C~k~f~~~~~l~~H~ 37 (74)
T 2lce_A 18 YKCDRCQASFRYKGNLASHK 37 (74)
T ss_dssp BCCTTSSCCBSCHHHHHHHH
T ss_pred eECCCCCceeCCHHHHHHHH
Confidence 34555555555555555554
No 187
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=63.32 E-value=1.1 Score=28.96 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~l~~H~~ 31 (45)
T 2epq_A 11 YSCPVCGLRFKRKDRMSYHVR 31 (45)
T ss_dssp SEETTTTEECSCHHHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 188
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.22 E-value=0.89 Score=29.54 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yto_A 13 YKCSDCGKAFTRKSGLHIHQQ 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EECcccCCccCCHhHHHHHHH
Confidence 469999999999999999984
No 189
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.75 E-value=0.97 Score=29.36 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytt_A 13 YQCSECGKSFSGSYRLTQHWI 33 (46)
T ss_dssp TCCSSSCCCCSSHHHHHHHHT
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 190
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.62 E-value=0.99 Score=29.31 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytq_A 13 YGCSECGKAFSSKSYLIIHMR 33 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHT
T ss_pred cCCCccChhhCChHHHHHHHH
Confidence 469999999999999999985
No 191
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.40 E-value=0.94 Score=29.42 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoo_A 13 YGCNECGKNFGRHSHLIEHLK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EEccccCcccCCHHHHHHHHH
Confidence 469999999999999999974
No 192
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.27 E-value=1.1 Score=28.84 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en8_A 13 HTCDECGKNFCYISALRIHQR 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred eECCCcCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 193
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.11 E-value=0.96 Score=29.28 Aligned_cols=21 Identities=19% Similarity=0.366 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ene_A 13 YKCNECGKVFRHNSYLSRHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCChHHHHHHHh
Confidence 569999999999999999985
No 194
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=62.09 E-value=1 Score=29.05 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el4_A 13 YGCSQCAKTFSLKSQLIVHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 195
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.06 E-value=0.96 Score=29.37 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em5_A 13 HQCHECGRGFTLKSHLNQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCcCCCccCCHHHHHHHHH
Confidence 569999999999999999984
No 196
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.04 E-value=0.96 Score=29.27 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eml_A 13 YECSVCGKAFSHRQSLSVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eeCCCcCCccCCHHHHHHHHH
Confidence 469999999999999999984
No 197
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.02 E-value=1 Score=29.15 Aligned_cols=21 Identities=19% Similarity=0.439 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoq_A 13 FKCDICGKSFCGRSRLNRHSM 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCcCCchhCCHHHHHHHHH
Confidence 469999999999999999974
No 198
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.77 E-value=0.98 Score=29.23 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep2_A 13 YECSICGKSFTKKSQLHVHQQ 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 199
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.24 E-value=1.1 Score=28.90 Aligned_cols=21 Identities=29% Similarity=0.401 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eov_A 13 YKCSDCGKSFTWKSRLRIHQK 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHH
T ss_pred ccCCccChhhCCHHHHHHHHH
Confidence 469999999999999999973
No 200
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.07 E-value=1 Score=29.06 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2epw_A 13 CKCTECGKAFCWKSQLIMHQR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH
T ss_pred eeCCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 201
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.99 E-value=1.1 Score=28.89 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 13 YECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp BCCSSSCCCBSSHHHHHHHHT
T ss_pred EECCccCchhCChHHHHHHhH
Confidence 469999999999999999985
No 202
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.37 E-value=1.1 Score=29.02 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yu8_A 13 YKCNECGKVFTQNSHLARHRR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHTH
T ss_pred eECCcCCchhCCHHHHHHHHH
Confidence 469999999999999999984
No 203
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.22 E-value=1.1 Score=29.02 Aligned_cols=21 Identities=24% Similarity=0.388 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2enc_A 13 FKCEECGKGFYTNSQCYSHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCCcCCChHHHHHHHH
Confidence 469999999999999999984
No 204
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=60.22 E-value=1.4 Score=27.17 Aligned_cols=24 Identities=29% Similarity=0.487 Sum_probs=19.6
Q ss_pred hhhh--hhhhhhhhhhhhhhhhchhhhH
Q psy1990 166 LYCR--VCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 166 ~~c~--~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
.-|. .|+..|++..+++.|| +.|.
T Consensus 7 ~~C~~~~C~k~f~~~~~L~~H~--~~H~ 32 (38)
T 1bhi_A 7 FLCTAPGCGQRFTNEDHLAVHK--HKHE 32 (38)
T ss_dssp EECCCTTTCCEESSHHHHHHHH--HHHH
T ss_pred eECCCCCCCcccCCHHHHHHHH--HHhC
Confidence 3588 5999999999999998 4453
No 205
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=60.18 E-value=1.1 Score=26.44 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=17.8
Q ss_pred hhh--hhhhhhhhhhhhhhhhc
Q psy1990 167 YCR--VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~--~c~q~fs~~hnk~eh~~ 186 (382)
-|. .|+..|++..+++.||.
T Consensus 5 ~C~~~~C~k~f~~~~~L~~H~~ 26 (32)
T 1zfd_A 5 SCDHPGCDKAFVRNHDLIRHKK 26 (32)
T ss_dssp CCCCTTCCCCBSSSHHHHHHHG
T ss_pred cCcCCCCCCccCCHHHHHHHHH
Confidence 487 89999999999999984
No 206
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=60.13 E-value=1.2 Score=28.96 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emk_A 13 YECKECGKAFSQTTHLIQHQR 33 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 207
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.95 E-value=1.1 Score=28.98 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytk_A 13 YKCNECGKVFTQNSHLTNHWR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EeCCcCCCccCCHHHHHHHHH
Confidence 469999999999999999984
No 208
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=59.89 E-value=1.1 Score=28.97 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ema_A 13 YKCNECGKVFSRNSQLSQHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred cCCCCCcchhCCHHHHHHHHH
Confidence 469999999999999999984
No 209
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=59.67 E-value=1.1 Score=25.48 Aligned_cols=20 Identities=20% Similarity=0.477 Sum_probs=17.9
Q ss_pred hhh--hhhhhhhhhhhhhhhhc
Q psy1990 167 YCR--VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~--~c~q~fs~~hnk~eh~~ 186 (382)
-|. .|+..|++..+++.|+.
T Consensus 4 ~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 4 VCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EECSTTTCEEESSHHHHHHHHG
T ss_pred CCcCCcCcCccCCHHHHHHHHH
Confidence 488 99999999999999974
No 210
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.59 E-value=1.1 Score=28.94 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emp_A 13 YMCNECGKAFSVYSSLTTHQV 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 211
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=59.46 E-value=1.5 Score=29.39 Aligned_cols=21 Identities=24% Similarity=0.469 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 5 ~~C~~C~~~f~~~~~l~~H~~ 25 (57)
T 3uk3_C 5 RECSYCGKFFRSNYYLNIHLR 25 (57)
T ss_dssp CBCTTTCCBCSCHHHHHHHHH
T ss_pred ccCCCCcchhCChHHHHHHHH
Confidence 359999999999999999985
No 212
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=58.27 E-value=1.3 Score=28.72 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el6_A 13 YKCSQCEKSFSGKLRLLVHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHHG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999974
No 213
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=57.55 E-value=1.6 Score=32.76 Aligned_cols=24 Identities=38% Similarity=0.610 Sum_probs=20.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhchhhhH
Q psy1990 166 LYCRVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
.-|..|+..|++..+++.|| |-|.
T Consensus 14 y~C~~CgK~F~~~s~L~~H~--r~Ht 37 (66)
T 2epp_A 14 LPCGLCGKVFTDANRLRQHE--AQHG 37 (66)
T ss_dssp CCCTTTCCCCSCHHHHHHHH--HHHT
T ss_pred cCCCCCCCccCCHHHHHhhh--hhhC
Confidence 35999999999999999998 4464
No 214
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.52 E-value=1.3 Score=28.65 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytd_A 13 YKCSECGKAFHRHTHLNEHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCCeeCChHHHHHHHH
Confidence 469999999999999999974
No 215
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=57.28 E-value=1.8 Score=30.85 Aligned_cols=21 Identities=24% Similarity=0.561 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 46 ~~C~~C~k~f~~~~~L~~H~~ 66 (74)
T 2lce_A 46 YRCNICGAQFNRPANLKTHTR 66 (74)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred EECCCCCchhCCHHHHHHHHH
Confidence 569999999999999999983
No 216
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=56.30 E-value=1.7 Score=31.69 Aligned_cols=23 Identities=17% Similarity=0.587 Sum_probs=19.7
Q ss_pred hhhhhhhhhhhhhhhhhhhchhhhH
Q psy1990 167 YCRVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
-|.+|+..|++..+++.||. -|.
T Consensus 6 ~C~~C~k~F~~~~~L~~H~~--~Ht 28 (60)
T 4gzn_C 6 FCNFCGKTYRDASGLSRHRR--AHL 28 (60)
T ss_dssp ECTTTCCEESSHHHHHHHHH--HHH
T ss_pred cCCCCCCEeCCHHHHHHHHH--HhC
Confidence 49999999999999999983 453
No 217
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=55.79 E-value=1.5 Score=29.36 Aligned_cols=21 Identities=29% Similarity=0.543 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 30 ~~C~~C~~~f~~~~~l~~H~~ 50 (57)
T 1bbo_A 30 YHCTYCNFSFKTKGNLTKHMK 50 (57)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCchhcCHHHHHHHHH
Confidence 569999999999999999984
No 218
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=55.08 E-value=1.9 Score=28.77 Aligned_cols=20 Identities=15% Similarity=0.403 Sum_probs=18.1
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~ 22 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKKHIR 22 (57)
T ss_dssp BCTTTCCBCSSHHHHHHHHH
T ss_pred cCCCCcCcCCCHHHHHHHHH
Confidence 48999999999999999984
No 219
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=54.76 E-value=1.9 Score=29.15 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=17.7
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYR 23 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHH
T ss_pred cCCCCccccCCHHHHHHHHH
Confidence 48899999999999999984
No 220
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=54.62 E-value=1.8 Score=29.85 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~ 61 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVK 61 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 3569999999999999999974
No 221
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=53.88 E-value=1.9 Score=29.74 Aligned_cols=21 Identities=29% Similarity=0.621 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~l~~H~~ 31 (66)
T 2drp_A 11 YRCKVCSRVYTHISNFCRHYV 31 (66)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred eECCCCcchhCCHHHHHHHHH
Confidence 469999999999999999984
No 222
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.84 E-value=2.3 Score=32.41 Aligned_cols=26 Identities=23% Similarity=0.371 Sum_probs=21.5
Q ss_pred chhhhhhhhhhhh-hhhhhhhhhchhhhH
Q psy1990 164 EELYCRVCDQWFT-TLHNKREHLNGRQHF 191 (382)
Q Consensus 164 ~~~~c~~c~q~fs-~~hnk~eh~~~~~h~ 191 (382)
...-|.+|+..|+ +..+++.|| +.|.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~--~~h~ 49 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHM--EVCQ 49 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHH--HHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHH--HHHc
Confidence 3467999999999 999999998 4454
No 223
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.71 E-value=1.7 Score=30.59 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=19.5
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
-.-|.+|+..|++..+++.||.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~ 30 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHER 30 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHG
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 3569999999999999999984
No 224
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=52.77 E-value=1.7 Score=29.45 Aligned_cols=21 Identities=19% Similarity=0.556 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (54)
T 2eps_A 13 YICQSCGKGFSRPDHLNGHIK 33 (54)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 225
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=52.59 E-value=1.8 Score=28.94 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 33 ~~C~~C~~~f~~~~~l~~H~~ 53 (57)
T 3uk3_C 33 YKCEFCEYAAAQKTSLRYHLE 53 (57)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred cCCCCCcchhCCHHHHHHHHH
Confidence 569999999999999999984
No 226
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.37 E-value=2.1 Score=30.64 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 16 ~~C~~C~k~f~~~~~L~~H~~ 36 (77)
T 2ct1_A 16 YECYICHARFTQSGTMKMHIL 36 (77)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCcCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 227
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.31 E-value=2 Score=30.74 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=14.8
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
.-|.+|+..|++..+++.||
T Consensus 47 ~~C~~C~~~f~~~~~L~~H~ 66 (77)
T 2cot_A 47 YKCDECGKAFIQRSHLIGHH 66 (77)
T ss_dssp EECSSSCCEESSHHHHHHHG
T ss_pred eeCCCCCCccCCHHHHHHHH
Confidence 45777777777777777776
No 228
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=51.86 E-value=2.1 Score=33.22 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
--|.+|++.|++..+++.||.
T Consensus 29 h~C~~Cgk~F~~~~~L~~H~~ 49 (85)
T 2lv2_A 29 HLCPVCGESFASKGAQERHLR 49 (85)
T ss_dssp EECTTSCCEESSHHHHHHHHH
T ss_pred EECCCCCCCcCcHHHHhhhhh
Confidence 359999999999999999983
No 229
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=51.24 E-value=2.3 Score=29.98 Aligned_cols=21 Identities=24% Similarity=0.643 Sum_probs=18.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 50 ~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 50 FQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp EECTTTCCEESCHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 569999999999999998874
No 230
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.01 E-value=2.1 Score=32.58 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhh
Q psy1990 165 ELYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~ 185 (382)
-.-|.+|+..|++..+++.||
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHH
T ss_pred CEECCCCCCccCCHHHHHHHH
Confidence 456999999999999999998
No 231
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.49 E-value=2 Score=30.71 Aligned_cols=24 Identities=25% Similarity=0.390 Sum_probs=20.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhchhhhH
Q psy1990 166 LYCRVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
.-|.+|+..|++..+++.|| +.|.
T Consensus 8 ~~C~~C~k~f~~~~~L~~H~--~~h~ 31 (78)
T 2d9h_A 8 LQCEICGFTCRQKASLNWHQ--RKHA 31 (78)
T ss_dssp EECSSSCCEESSHHHHHHHH--HHHH
T ss_pred eECCCCCCeeCCHHHHHHHH--HHhh
Confidence 45999999999999999998 4454
No 232
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=50.02 E-value=2.4 Score=28.67 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 31 ~~C~~C~~~f~~~~~l~~H~~ 51 (60)
T 2adr_A 31 YPCGLCNRAFTRRDLLIRHAQ 51 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred ccCCCCCCccCCHHHHHHHHH
Confidence 569999999999999999975
No 233
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.97 E-value=2.1 Score=30.37 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 43 ~~C~~C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 43 YKCLECGKAFSQNSGLINHQR 63 (72)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 569999999999999999973
No 234
>2pfz_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.80A {Bordetella pertussis tohama I}
Probab=49.92 E-value=53 Score=29.97 Aligned_cols=73 Identities=5% Similarity=-0.071 Sum_probs=45.4
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 85 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRY 85 (382)
.+.|..||++.++...+.+.+--.......... +....+.++.-|-.+..+++++++.|.+.+.....+|
T Consensus 214 ~~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~----------~~~~~~~l~~~G~~v~~~~~e~~~~~~~~~~~v~~~~ 283 (301)
T 2pfz_A 214 KKAFDALDPATQQALKKAGAQAEERGWKLSQEK----------NSWYKEQLAKNGMAIIAPTAELKSGLTEVGKRMLDDW 283 (301)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCCEEecCCHHHHHHHHHHHHHHHHHH
Confidence 357999999999998886654322221111111 1112233344466788899999999998877766666
Q ss_pred HHH
Q psy1990 86 REE 88 (382)
Q Consensus 86 ekE 88 (382)
.++
T Consensus 284 ~~~ 286 (301)
T 2pfz_A 284 LKK 286 (301)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 235
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.50 E-value=3.2 Score=28.66 Aligned_cols=23 Identities=9% Similarity=0.097 Sum_probs=20.3
Q ss_pred chhhhhhhhhhhhhhhhhhhhhc
Q psy1990 164 EELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 164 ~~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
...-|.+|+..|++..+++.||.
T Consensus 38 ~~~~C~~C~~~f~~~~~l~~H~~ 60 (73)
T 2ctu_A 38 KTPMCEKCRKDSCQEAALNKDEG 60 (73)
T ss_dssp SSCCCHHHHHTCSCCCSSCCCSS
T ss_pred CCCCCCCCChhhcCHHHHHHHHH
Confidence 34679999999999999999984
No 236
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.43 E-value=2.2 Score=30.01 Aligned_cols=21 Identities=19% Similarity=0.359 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 38 ~~C~~C~~~f~~~~~L~~H~~ 58 (70)
T 1x5w_A 38 FKCNYCSFDTKQPSNLSKHMK 58 (70)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred EeCCCCCCccCCHHHHHHHHH
Confidence 579999999999999999983
No 237
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.74 E-value=2.3 Score=30.47 Aligned_cols=22 Identities=23% Similarity=0.452 Sum_probs=19.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~ 66 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLR 66 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCCCccCCHHHHHHHHH
Confidence 3579999999999999999984
No 238
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.53 E-value=2.7 Score=30.08 Aligned_cols=21 Identities=19% Similarity=0.490 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 39 ~~C~~C~k~f~~~~~L~~H~~ 59 (78)
T 2d9h_A 39 FPCEFCGKRFEKPDSVAAHRS 59 (78)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 569999999999999999974
No 239
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.32 E-value=2.3 Score=30.15 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=19.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~ 35 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQR 35 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHH
Confidence 3579999999999999999984
No 240
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.66 E-value=2.4 Score=28.35 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=17.8
Q ss_pred hhhhh--hhhhhhhhhhhhhhh
Q psy1990 166 LYCRV--CDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~--c~q~fs~~hnk~eh~ 185 (382)
--|.. |+..|++..+++-||
T Consensus 10 ~~C~~~~C~k~F~~~~~L~~H~ 31 (38)
T 2eln_A 10 LKCPTDGCDYSTPDKYKLQAHL 31 (38)
T ss_dssp EECSSSSCCCEESCHHHHHHHH
T ss_pred CCCCCCCCCCccCCHHHHHHHH
Confidence 35876 999999999999998
No 241
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=46.16 E-value=3.1 Score=29.41 Aligned_cols=22 Identities=27% Similarity=0.471 Sum_probs=19.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 57 ~~~C~~C~~~f~~~~~l~~H~~ 78 (82)
T 2kmk_A 57 PHKCQVCGKAFSQSSNLITHSR 78 (82)
T ss_dssp CEECTTTSCEESSHHHHHHHHH
T ss_pred CCcCCCcchhhCChHHHHHHHH
Confidence 3679999999999999999984
No 242
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=46.15 E-value=16 Score=32.92 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=32.4
Q ss_pred hhhhhHHHHhH-HHHHHhcCCCcchhhhhHHHHHH-HHHHHHHHHHHH
Q psy1990 47 YLILLFFQVTK-LLGNEWSKLSLPEKKVYLDRAEV-DKKRYREELKVY 92 (382)
Q Consensus 47 fPglSftEIsK-~LGErWK~LSdEEKqpYedkAek-dKeRYekEMkeY 92 (382)
-|-..+..+++ .||..|+.+|++|++.|.+.... ...-|-..+..|
T Consensus 69 ~p~~D~~~~a~~vLG~~wr~at~~Qr~~F~~~F~~~L~~tY~~~l~~y 116 (211)
T 2qgu_A 69 VPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKSLLIRTYAGALANV 116 (211)
T ss_dssp GGGBCHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhcCHHHHHHHHHhHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45566777766 46999999999999999876554 344455555555
No 243
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.15 E-value=3.7 Score=30.11 Aligned_cols=22 Identities=23% Similarity=0.605 Sum_probs=19.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~ 29 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMR 29 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGG
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 3569999999999999999985
No 244
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=45.48 E-value=6.4 Score=31.48 Aligned_cols=25 Identities=24% Similarity=0.407 Sum_probs=21.8
Q ss_pred Ccchhhhhhhhhhhhhhhhhhhhhc
Q psy1990 162 DNEELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 162 d~~~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
++...-|.+|+..|.+..+++.||.
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~ 46 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVT 46 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHH
T ss_pred hhcccccccCCcccCCHHHHHHHHH
Confidence 4556789999999999999999985
No 245
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=45.13 E-value=2.5 Score=26.22 Aligned_cols=21 Identities=24% Similarity=0.632 Sum_probs=18.1
Q ss_pred hhhhh--hhhhhhhhhhhhhhhc
Q psy1990 166 LYCRV--CDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~--c~q~fs~~hnk~eh~~ 186 (382)
.-|.+ |+..|++..+++.|+.
T Consensus 9 ~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 9 HICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp EECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCccCCHHHHHHHHH
Confidence 45884 9999999999999974
No 246
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.88 E-value=2.8 Score=30.02 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhh
Q psy1990 165 ELYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~ 185 (382)
-.-|.+|+..|++..+++.||
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~ 67 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHA 67 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHH
T ss_pred ceECCCCCChhCCHHHHHHHH
Confidence 356999999999999999998
No 247
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.44 E-value=3.6 Score=31.86 Aligned_cols=21 Identities=19% Similarity=0.518 Sum_probs=19.0
Q ss_pred hhhhhhhhhh-hhhhhhhhhhc
Q psy1990 166 LYCRVCDQWF-TTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~f-s~~hnk~eh~~ 186 (382)
.-|.+|+..| ++..+++.||.
T Consensus 35 ~~C~~C~k~F~~~~~~L~~H~~ 56 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHME 56 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHH
T ss_pred cCCCCCCCCcccCHHHHHHHHH
Confidence 5699999999 99999999984
No 248
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.36 E-value=3.5 Score=30.29 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~ 83 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIR 83 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 249
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=42.32 E-value=3.7 Score=31.82 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
--|.+|+..|++..+++.||.
T Consensus 57 ~~C~~C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 57 FPCKYCPATFYSSPGLTRHIN 77 (85)
T ss_dssp EECTTSSCEESSHHHHHHHHH
T ss_pred cCCCCCCCEeCCHHHHHHhCc
Confidence 569999999999999999984
No 250
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.21 E-value=3.3 Score=29.62 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 16 ~~C~~C~~~f~~~~~l~~H~~ 36 (86)
T 1x6h_A 16 YACSHCDKTFRQKQLLDMHFK 36 (86)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHH
Confidence 569999999999999999984
No 251
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=41.64 E-value=3.6 Score=29.40 Aligned_cols=22 Identities=18% Similarity=0.433 Sum_probs=19.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~ 39 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRR 39 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHT
T ss_pred CEECCCCCcccCCHHHHHHHHH
Confidence 4569999999999999999984
No 252
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.83 E-value=3.8 Score=29.95 Aligned_cols=22 Identities=18% Similarity=0.523 Sum_probs=19.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|++..+++.||.
T Consensus 65 ~~~C~~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 65 PYICQSCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHH
T ss_pred ceECCCccchhCCHHHHHHHHH
Confidence 3569999999999999999984
No 253
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=40.82 E-value=4.2 Score=29.35 Aligned_cols=21 Identities=19% Similarity=0.661 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~ 83 (90)
T 1a1h_A 63 FACDICGRKFARSDERKRHTK 83 (90)
T ss_dssp EECTTTCCEESSHHHHHHHHG
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 254
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=40.80 E-value=3.5 Score=29.09 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=17.6
Q ss_pred hhhhhhhhhhhhhhhhhhhc
Q psy1990 167 YCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~ 186 (382)
-|.+|+..|++..+++.||.
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~ 22 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLL 22 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCcccccCchhHHHHHH
Confidence 38899999999999999984
No 255
>2pfy_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.95A {Bordetella pertussis tohama I}
Probab=40.63 E-value=47 Score=30.28 Aligned_cols=72 Identities=10% Similarity=0.011 Sum_probs=44.4
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 85 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRY 85 (382)
.+.|..||++.++...+.+.+--.......... +....+.++.-|-.+..+++++++.|.+.+.....+|
T Consensus 215 ~~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~----------~~~~~~~l~~~G~~v~~~~~e~~~~~~~~~~~v~~~~ 284 (301)
T 2pfy_A 215 KRAFQRLPAEVRQAVLDAGAKAEIRGWQTARAK----------TRELTDTLARNGMSVEPLPPQLAKELQAIGATMVSDW 284 (301)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCCEEecCCHHHHHHHHHHHHHHHHHH
Confidence 357999999999988886654322222111111 1112233344466788899999999988777666665
Q ss_pred HH
Q psy1990 86 RE 87 (382)
Q Consensus 86 ek 87 (382)
.+
T Consensus 285 ~~ 286 (301)
T 2pfy_A 285 SK 286 (301)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 256
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.98 E-value=4 Score=31.57 Aligned_cols=20 Identities=20% Similarity=0.582 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhhhhhh-h
Q psy1990 166 LYCRVCDQWFTTLHNKREH-L 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh-~ 185 (382)
.-|.+|+..|++..+++.| |
T Consensus 63 ~~C~~Cgk~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 63 FTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred eECCCCCCeeCCHHHHHHHhH
Confidence 4599999999999999999 5
No 257
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.82 E-value=3.4 Score=31.57 Aligned_cols=26 Identities=27% Similarity=0.628 Sum_probs=21.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhchhhhH
Q psy1990 166 LYCRVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
.-|.+|+..|++..+++.||.--.|.
T Consensus 81 ~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 81 LKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred eECCCCCCccCCHHHHHHHHHHhCCc
Confidence 56999999999999999998654443
No 258
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=39.65 E-value=1.4e+02 Score=24.50 Aligned_cols=51 Identities=14% Similarity=0.209 Sum_probs=38.6
Q ss_pred hHHHHhHHHHHHhcCCC---cchhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q psy1990 51 LFFQVTKLLGNEWSKLS---LPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLRR 104 (382)
Q Consensus 51 SftEIsK~LGErWK~LS---dEEKqpYedkAekdKeRYekEMkeYkks~aYk~~~kr 104 (382)
+..+-+..|...|.+|+ +.++.+|.+.-+.....|..-+.. ...|-+|++.
T Consensus 24 ~Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e~---a~e~vp~L~~ 77 (94)
T 3fx7_A 24 LLREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDEA---AQEQIAWLKE 77 (94)
T ss_dssp HHHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHHh---hHHHhHHHHH
Confidence 45567777888899887 788899999888888888777763 3457777743
No 259
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=39.44 E-value=11 Score=27.38 Aligned_cols=24 Identities=0% Similarity=-0.027 Sum_probs=20.7
Q ss_pred chhhhhhhhhhhhhhhhhhhhhch
Q psy1990 164 EELYCRVCDQWFTTLHNKREHLNG 187 (382)
Q Consensus 164 ~~~~c~~c~q~fs~~hnk~eh~~~ 187 (382)
....|..|+..|++..+++.||..
T Consensus 57 ~~~~c~~C~~~f~~~~~L~~H~~~ 80 (88)
T 1llm_C 57 LPILEDKVEELLSKNYHLENEVAR 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhhhHHHHHH
Confidence 457899999999999999999854
No 260
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=38.82 E-value=4.2 Score=29.25 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 66 ~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 66 FQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp EECSSSSCEESSHHHHHHHGG
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 261
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=38.50 E-value=4.4 Score=29.81 Aligned_cols=21 Identities=24% Similarity=0.603 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 76 ~~C~~C~~~f~~~~~l~~H~~ 96 (100)
T 2ebt_A 76 FQCGVCNRSFSRSDHLALHMK 96 (100)
T ss_dssp CBCSSSCCBCSSHHHHHHHHH
T ss_pred eECCCCcCccCCHHHHHHHHH
Confidence 569999999999999999983
No 262
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=38.33 E-value=5.5 Score=30.12 Aligned_cols=20 Identities=30% Similarity=0.483 Sum_probs=14.6
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
.-|.+|+..|.+..+++.||
T Consensus 43 ~~C~~C~~~f~~~~~l~~H~ 62 (107)
T 1wjp_A 43 AVCPYCSLRFFSPELKQEHE 62 (107)
T ss_dssp BCCTTTCCCBSSHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHH
Confidence 45777777777777777776
No 263
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=38.03 E-value=4.9 Score=29.44 Aligned_cols=21 Identities=24% Similarity=0.643 Sum_probs=18.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 4 ~~C~~C~k~f~~~~~L~~H~~ 24 (88)
T 1llm_C 4 FQCRICMRNFSRSDHLTTHIR 24 (88)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHH
Confidence 359999999999999999984
No 264
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.90 E-value=6 Score=29.92 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=19.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHH
T ss_pred CccCccccchhCCHHHHHHHHH
Confidence 4679999999999999999985
No 265
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=37.66 E-value=4.6 Score=30.21 Aligned_cols=22 Identities=32% Similarity=0.563 Sum_probs=19.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
...|.+|+..|.+..+++.||.
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~ 38 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHER 38 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 3679999999999999999984
No 266
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=37.47 E-value=4 Score=26.90 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=18.1
Q ss_pred hhhh--hhhhhhhhhhhhhhhhc
Q psy1990 166 LYCR--VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~--~c~q~fs~~hnk~eh~~ 186 (382)
.-|. .|+..|++..+++.||.
T Consensus 19 ~~C~~~~C~k~F~~~~~L~~H~~ 41 (47)
T 1ncs_A 19 FECLFPGCTKTFKRRYNIRSHIQ 41 (47)
T ss_dssp EECCCTTCCCEECSSSSHHHHHH
T ss_pred eECCCCCCCCccCCHHHHHHHHH
Confidence 4585 79999999999999984
No 267
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=37.33 E-value=4.6 Score=30.21 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=20.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhchhhh
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLNGRQH 190 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~~~~h 190 (382)
..-|.+|+..|.+..+++.|| +.|
T Consensus 73 ~~~C~~C~~~f~~~~~L~~H~--~~H 96 (106)
T 2ee8_A 73 PFKCQECGKGFCQSRTLAVHK--TLH 96 (106)
T ss_dssp TTSCSSSCCCCSSHHHHHHHH--HHT
T ss_pred CeECCCcCCcccCHHHHHHHH--HHh
Confidence 367999999999999999998 445
No 268
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.59 E-value=4.6 Score=28.24 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=17.9
Q ss_pred hhhh-hhhhhhhhhhhhhhhhc
Q psy1990 166 LYCR-VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~-~c~q~fs~~hnk~eh~~ 186 (382)
.-|. .|+..|++..+++.||.
T Consensus 37 ~~C~~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 37 VACPNQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp EECTTCCSCCEEETTTHHHHHH
T ss_pred ccCCcccCcccccHHHHHHHHH
Confidence 4588 89999999999999983
No 269
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=36.44 E-value=4.6 Score=29.53 Aligned_cols=22 Identities=18% Similarity=0.489 Sum_probs=19.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~ 28 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKL 28 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHH
T ss_pred CeECCCCCCccCChHHHHHHHH
Confidence 3569999999999999999984
No 270
>3u65_B TP33 protein; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; HET: EDO; 1.40A {Treponema pallidum subsp} PDB: 4di4_B* 4di3_D*
Probab=35.04 E-value=73 Score=29.98 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=43.2
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 85 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRY 85 (382)
...|..||++.|+...+.+.+--....+...+. +....+.++.-|-....+++++++.|.+.+......+
T Consensus 234 ~~~w~~L~~e~q~~i~~a~~e~~~~~~~~~~~~----------~~~~~~~l~~~Gv~v~~~~~e~~~~~~~~~~~v~~~~ 303 (328)
T 3u65_B 234 DGSWARIPSRYHDAMLQAATRVRQRLANNLETL----------DRECSNNIQKAGVSIVHLTPQEIQEWRTEFAADVKRI 303 (328)
T ss_dssp HHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999999887765433222222211 1112233344455677888888888888776655433
No 271
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.65 E-value=4.7 Score=25.91 Aligned_cols=21 Identities=19% Similarity=0.395 Sum_probs=18.3
Q ss_pred hhhh--hhhhhhhhhhhhhhhhc
Q psy1990 166 LYCR--VCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~--~c~q~fs~~hnk~eh~~ 186 (382)
.-|. .|+..|++..+++.||.
T Consensus 13 ~~C~~~~C~k~f~~~~~L~~H~~ 35 (48)
T 2ent_A 13 FACTWPGCGWRFSRSDELSRHRR 35 (48)
T ss_dssp EECCSSSCCCEESSHHHHHHHHT
T ss_pred eECCCCCCCCccCCHHHHHHHHH
Confidence 3587 89999999999999984
No 272
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=34.51 E-value=6.5 Score=30.64 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 101 ~~C~~C~k~f~~~~~l~~H~~ 121 (129)
T 2wbt_A 101 KVCPVCKKEFTSTDSALDHVC 121 (129)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999974
No 273
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.46 E-value=5.2 Score=31.75 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=20.6
Q ss_pred hhhhhh--hhhhhhhhhhhhhhhchhhhH
Q psy1990 165 ELYCRV--CDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 165 ~~~c~~--c~q~fs~~hnk~eh~~~~~h~ 191 (382)
--.|.. |+..|++..+++-||. |.|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~r-riHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQ-AVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHH-HHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhh-hhCC
Confidence 356864 9999999999999984 4464
No 274
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=34.41 E-value=5.3 Score=29.24 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 65 ~~C~~C~~~f~~~~~l~~H~~ 85 (96)
T 2dmd_A 65 FKCQICPYASRNSSQLTVHLR 85 (96)
T ss_dssp EECSSSSCEESSHHHHHHHHT
T ss_pred ccCCCCCCccCCHHHHHHHHH
Confidence 569999999999999999974
No 275
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.94 E-value=11 Score=27.48 Aligned_cols=21 Identities=29% Similarity=0.518 Sum_probs=18.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
--|.+|+..|++..+++.||.
T Consensus 26 ~~C~~C~k~f~~~~~L~~H~~ 46 (95)
T 2ej4_A 26 RPKKSCDRTFSTMHELVTHVT 46 (95)
T ss_dssp SSCCCCCCCCSSHHHHHHHHH
T ss_pred CcccccccccCCHHHHHHHHH
Confidence 359999999999999999984
No 276
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=32.76 E-value=6.8 Score=30.53 Aligned_cols=21 Identities=19% Similarity=0.524 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 75 ~~C~~C~k~f~~~~~l~~H~~ 95 (129)
T 2wbt_A 75 FVCPLCLMPFSSSVSLKQHIR 95 (129)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHhHHHHHHH
Confidence 359999999999999999984
No 277
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=32.72 E-value=6.7 Score=28.23 Aligned_cols=22 Identities=23% Similarity=0.606 Sum_probs=19.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
...|.+|+..|++..+++.||.
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~ 55 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIR 55 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 3579999999999999999985
No 278
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=32.71 E-value=6.7 Score=29.62 Aligned_cols=21 Identities=19% Similarity=0.607 Sum_probs=19.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~ 87 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTR 87 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred ccCCccCchhCCHHHHHHHHH
Confidence 579999999999999999984
No 279
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=31.81 E-value=43 Score=28.43 Aligned_cols=59 Identities=25% Similarity=0.327 Sum_probs=41.8
Q ss_pred hhHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHH-----HhhhcccccccCCCCcccccccccccccchhhHHHHHHhh
Q psy1990 237 MEDNIASVV---RTMIDQNKEIQLLRSKMKSLQEK-----RLKKNAYVYFFPFLSRPEQRNSTAPLQNEKSARETAQAEK 308 (382)
Q Consensus 237 ~~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (382)
++++.+++- ..|.....+|.+|+.++.++++. -|+.++-||+--| +.|.++|+.++-++
T Consensus 26 i~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF-------------~aERadREkl~~eK 92 (110)
T 2v4h_A 26 LEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADF-------------QAERHAREKLVEKK 92 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------ccchhhHHHHHhHH
Confidence 444444443 45777889999999999998874 6788899998733 45777777665443
No 280
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=31.64 E-value=39 Score=30.38 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=30.6
Q ss_pred chHHHHhcCCChHHHHHHHHHHHHHHH-HHHHHHHhhc
Q psy1990 3 KLLGNEWSKLSLPEKKVYLDRAEVDKK-RYREELKVYR 39 (382)
Q Consensus 3 KiLGEkWK~LSdeEKqkYedkAkeDKe-RYeeEMeeYk 39 (382)
..||.-|+++|+++++.|.+....--. .|-..+..|.
T Consensus 80 ~vLG~~wr~at~~Qr~~F~~~F~~~L~~tY~~~l~~y~ 117 (211)
T 2qgu_A 80 IAMGRFWSQATPEQQQQIQDGFKSLLIRTYAGALANVR 117 (211)
T ss_dssp HHHGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHhHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 357999999999999999998776544 5888888885
No 281
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.61 E-value=6.2 Score=29.79 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 66 ~~C~~C~~~f~~~~~l~~H~~ 86 (110)
T 2csh_A 66 YECNICAKRFMWRDSFHRHVT 86 (110)
T ss_dssp EECSSSCCEESCHHHHHHHHH
T ss_pred eeCCCCcchhcCHHHHHHHHH
Confidence 569999999999999999984
No 282
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=31.42 E-value=7.2 Score=39.17 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=27.4
Q ss_pred hhhhhhhh------hhhhhhhhhhhhchhhhHHhhhh
Q psy1990 166 LYCRVCDQ------WFTTLHNKREHLNGRQHFQAVEQ 196 (382)
Q Consensus 166 ~~c~~c~q------~fs~~hnk~eh~~~~~h~~~~~~ 196 (382)
-+|.+|+- .+-.-++-..|+.||.|..+|..
T Consensus 361 ~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~~ 397 (409)
T 3eph_A 361 YTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKR 397 (409)
T ss_dssp EEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHHH
T ss_pred eeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHHH
Confidence 46999997 68889999999999999998864
No 283
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=31.40 E-value=7.2 Score=27.30 Aligned_cols=23 Identities=13% Similarity=0.355 Sum_probs=19.3
Q ss_pred chhhhhh--hhhhhhhhhhhhhhhc
Q psy1990 164 EELYCRV--CDQWFTTLHNKREHLN 186 (382)
Q Consensus 164 ~~~~c~~--c~q~fs~~hnk~eh~~ 186 (382)
....|.. |+..|++..+++.||.
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~ 40 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTR 40 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHH
T ss_pred CceeCCCCCCccccCCHHHHHHHHH
Confidence 3456877 9999999999999983
No 284
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=30.99 E-value=7.9 Score=29.35 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=19.5
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 7 GVECPTCHKKFLSKYYLKVHNR 28 (124)
T ss_dssp SCCCTTTCCCCSSHHHHHHHHH
T ss_pred CCCCCCCCCcCCCHHHHHHHHH
Confidence 3569999999999999999984
No 285
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.85 E-value=7.6 Score=29.29 Aligned_cols=21 Identities=29% Similarity=0.569 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 38 ~~C~~C~~~f~~~~~l~~H~~ 58 (110)
T 2csh_A 38 YGCGVCGKKFKMKHHLVGHMK 58 (110)
T ss_dssp EECTTTSCEESSSHHHHHHHT
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 579999999999999999984
No 286
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=30.56 E-value=6.7 Score=29.77 Aligned_cols=21 Identities=24% Similarity=0.523 Sum_probs=18.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 95 ~~C~~C~~~f~~~~~l~~H~~ 115 (124)
T 2dlq_A 95 YKCSSCSQQFMQKKDLQSHMI 115 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred ccCCCccchhCCHHHHHHHHH
Confidence 569999999999999988874
No 287
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.46 E-value=6.9 Score=29.76 Aligned_cols=21 Identities=29% Similarity=0.613 Sum_probs=19.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 20 ~~C~~C~k~f~~~~~L~~H~~ 40 (115)
T 2dmi_A 20 FRCKDCSAAYDTLVELTVHMN 40 (115)
T ss_dssp EEBSSSSCEESSHHHHHHHHH
T ss_pred EECCccCchhcCHHHHHHHHH
Confidence 569999999999999999985
No 288
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=29.78 E-value=7.4 Score=27.25 Aligned_cols=23 Identities=26% Similarity=0.480 Sum_probs=19.6
Q ss_pred cchhhhhhhhhhhhhhhhhhhhh
Q psy1990 163 NEELYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 163 ~~~~~c~~c~q~fs~~hnk~eh~ 185 (382)
...-+|..|+-.|+++.+..-|.
T Consensus 6 ~~~~~C~~C~IsF~~l~ty~aHK 28 (36)
T 1fu9_A 6 VMKKYCSTCDISFNYVKTYLAHK 28 (36)
T ss_dssp CCCSEETTTTEECSSHHHHHHHH
T ss_pred cCcCeeccccceehhhHHHhhhh
Confidence 34568999999999999998885
No 289
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=28.69 E-value=8.6 Score=31.55 Aligned_cols=22 Identities=36% Similarity=0.759 Sum_probs=19.6
Q ss_pred hhhhhhhhhhhhhhhhhhhchhhh
Q psy1990 167 YCRVCDQWFTTLHNKREHLNGRQH 190 (382)
Q Consensus 167 ~c~~c~q~fs~~hnk~eh~~~~~h 190 (382)
-|.+|+..|++..+++.||. .|
T Consensus 24 ~C~~C~k~F~~~~~L~~H~~--~H 45 (133)
T 2lt7_A 24 ICIVCKRSYVCLTSLRRHFN--IH 45 (133)
T ss_dssp EETTTCCEESCHHHHHHHHH--HH
T ss_pred ECCCCCCCcCCHHHHHHHHH--Hc
Confidence 49999999999999999984 46
No 290
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=28.12 E-value=7.8 Score=29.87 Aligned_cols=25 Identities=28% Similarity=0.512 Sum_probs=21.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhchhhhH
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
..-|.+|+..|++..+++.||. -|.
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~--~Ht 49 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLN--IHN 49 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHH--HHH
T ss_pred CCcCCCCCCEeCCHHHHHHHHH--HhC
Confidence 3569999999999999999984 454
No 291
>2hzl_A Trap-T family sorbitol/mannitol transporter, periplasmic binding protein, SMOM; trap transporter, periplasmic subunit, ligand binding; 1.40A {Rhodobacter sphaeroides 2} PDB: 2hzk_A
Probab=27.91 E-value=96 Score=29.02 Aligned_cols=22 Identities=5% Similarity=0.077 Sum_probs=17.6
Q ss_pred HHHhcCCChHHHHHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVD 27 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeD 27 (382)
.+.|..||++.|+...+.+.+-
T Consensus 251 ~~~~~~L~~~~q~~l~~a~~~a 272 (365)
T 2hzl_A 251 KSAYEGLTPTYQSLLRTACHAA 272 (365)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHH
Confidence 3579999999999888876543
No 292
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.68 E-value=8.1 Score=27.25 Aligned_cols=21 Identities=24% Similarity=0.594 Sum_probs=18.8
Q ss_pred hhhhh--hhhhhhhhhhhhhhhc
Q psy1990 166 LYCRV--CDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~--c~q~fs~~hnk~eh~~ 186 (382)
.-|.+ |+..|++..+++.||.
T Consensus 39 ~~C~~~~C~k~f~~~~~L~~H~~ 61 (79)
T 2dlk_A 39 FSCPEPACGKSFNFKKHLKEHMK 61 (79)
T ss_dssp EECSCTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCCcCccCCHHHHHHHHH
Confidence 56888 9999999999999984
No 293
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.17 E-value=10 Score=30.31 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=18.2
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy1990 166 LYCRVCDQWFTTLHNKREHL 185 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~ 185 (382)
.-|.+|+..|++..+++.||
T Consensus 51 f~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 51 YVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp EEETTTTEEESSTHHHHTHH
T ss_pred cCCCCCCcccCCHHHHHHHH
Confidence 56999999999999999994
No 294
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=27.06 E-value=11 Score=28.93 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=19.5
Q ss_pred hhhhhhhhhhhhhhhhhhhhhc
Q psy1990 165 ELYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 165 ~~~c~~c~q~fs~~hnk~eh~~ 186 (382)
..-|.+|+..|.+..+++.||.
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~ 55 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQL 55 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGG
T ss_pred CeECCCCCchhCCHHHHHHHHH
Confidence 3569999999999999999985
No 295
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=26.64 E-value=37 Score=27.45 Aligned_cols=17 Identities=41% Similarity=0.804 Sum_probs=11.6
Q ss_pred ccccCCcchhhhhhhhhh
Q psy1990 157 DEEEEDNEELYCRVCDQW 174 (382)
Q Consensus 157 d~~~~d~~~~~c~~c~q~ 174 (382)
|.+.++++..|| +|++-
T Consensus 28 ~~~~d~~e~~yC-iC~~~ 44 (91)
T 1weu_A 28 DMPVDPNEPTYC-LCHQV 44 (91)
T ss_dssp SCCCCSCCCBCS-TTCCB
T ss_pred cCCcCCCCCcEE-ECCCC
Confidence 334455678899 99874
No 296
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=24.63 E-value=14 Score=28.94 Aligned_cols=21 Identities=29% Similarity=0.487 Sum_probs=14.1
Q ss_pred chhhhhhhhhhhhhhhhhhhh
Q psy1990 164 EELYCRVCDQWFTTLHNKREH 184 (382)
Q Consensus 164 ~~~~c~~c~q~fs~~hnk~eh 184 (382)
++|||..|..-++---..|+|
T Consensus 27 gDLYC~rC~rE~H~~~d~r~H 47 (67)
T 2d8v_A 27 GDLYCARCFREGHDNFDLKEH 47 (67)
T ss_dssp SEEECSSHHHHHTTTSSTTTC
T ss_pred CceehHHHHHHHccchhhhcc
Confidence 579999998777644344444
No 297
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, TR membrane; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=24.23 E-value=3e+02 Score=25.49 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=41.6
Q ss_pred HHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHhHHH--HHHhcCCCcchhhhhHHHHHHHHHH
Q psy1990 7 NEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVTKLL--GNEWSKLSLPEKKVYLDRAEVDKKR 84 (382)
Q Consensus 7 EkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIsK~L--GErWK~LSdEEKqpYedkAekdKeR 84 (382)
..|..||++.|+...+.+.+--.......... +....+.++.- |-.-..+++++++.|.+.+..-...
T Consensus 232 ~~w~~L~~e~q~~i~~aa~~~~~~~~~~~~~~----------~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~a~~~v~~~ 301 (326)
T 3fxb_A 232 DFYDGLSAEDQQLVQNAALAAYDHTVVYQQQA----------ADTELAKIMEAKPEMQVTVLTDEQRSCFKEAAAEVEAK 301 (326)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH----------HTTHHHHHHHHCTTCEEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHhcCCCeEEEECCHHHHHHHHHHHHHHHHH
Confidence 57999999999999887765332222211111 11111111211 2344567888888888877766666
Q ss_pred HHHHH
Q psy1990 85 YREEL 89 (382)
Q Consensus 85 YekEM 89 (382)
|.++.
T Consensus 302 ~~~~~ 306 (326)
T 3fxb_A 302 FIEMT 306 (326)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 65543
No 298
>2vpn_A Periplasmic substrate binding protein; ectoine, hydroxyectoine, trap-transporter, periplasmic binding protein, transport; HET: 4CS; 1.55A {Halomonas elongata} PDB: 2vpo_A* 3gyy_A
Probab=23.10 E-value=80 Score=29.02 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=41.6
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHh--HHHHHHhcCCCcchhhhhHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVT--KLLGNEWSKLSLPEKKVYLDRAEVDKK 83 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIs--K~LGErWK~LSdEEKqpYedkAekdKe 83 (382)
.+.|..||++.++...+.+.+--.......... +....+.+ +.-|-.+..+++++++.|.+.+..-..
T Consensus 217 ~~~~~~L~~~~q~~l~~a~~~a~~~~~~~~~~~----------~~~~~~~l~~~~~Gv~v~~~~~~~~~~~~~~~~~v~~ 286 (316)
T 2vpn_A 217 QDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGL----------SEESLEKIKAASDEVTVTRLNDEQIQAFKERAPQVEE 286 (316)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTH----------HHHHHHHHHHHCTTCEEEECCHHHHHHHHTTHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHhhhcCCCEEEeCCHHHHHHHHHHHHHHHH
Confidence 357999999999988876554222211111100 00111112 233556778888888888887766655
Q ss_pred HHHH
Q psy1990 84 RYRE 87 (382)
Q Consensus 84 RYek 87 (382)
+|.+
T Consensus 287 ~~~~ 290 (316)
T 2vpn_A 287 KFIE 290 (316)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 299
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=22.52 E-value=12 Score=26.29 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=18.1
Q ss_pred h--hhhhhhhhhhhhhhhhhchhhhH
Q psy1990 168 C--RVCDQWFTTLHNKREHLNGRQHF 191 (382)
Q Consensus 168 c--~~c~q~fs~~hnk~eh~~~~~h~ 191 (382)
| ..|+..|++..+++.|| +.|.
T Consensus 4 C~~~~C~~~f~~~~~l~~H~--~~h~ 27 (85)
T 2j7j_A 4 CHFENCGKAFKKHNQLKVHQ--FSHT 27 (85)
T ss_dssp CCSTTCCCEESSHHHHHHHH--HHHH
T ss_pred CCCCCCCcccCCHHHHHHHH--HHhC
Confidence 7 78999999999999997 3453
No 300
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=21.14 E-value=15 Score=29.22 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=19.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|.+..+++.||.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~ 83 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIR 83 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTH
T ss_pred cCCCCcccccCCHHHHHHHHH
Confidence 469999999999999999985
No 301
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=21.07 E-value=15 Score=30.38 Aligned_cols=21 Identities=19% Similarity=0.376 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|.+|+..|++..+++.||.
T Consensus 162 ~~C~~C~~~f~~~~~L~~H~~ 182 (190)
T 2i13_A 162 YKCPECGKSFSRRDALNVHQR 182 (190)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 569999999999999999984
No 302
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=20.79 E-value=1.3e+02 Score=28.05 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=40.0
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHhHHHHHHhcCCCcchhhhhHHHHHHHHHHH
Q psy1990 6 GNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLILLFFQVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 85 (382)
Q Consensus 6 GEkWK~LSdeEKqkYedkAkeDKeRYeeEMeeYk~KDAY~lfPglSftEIsK~LGErWK~LSdEEKqpYedkAekdKeRY 85 (382)
.+.|..||++.++...+.+.+-........... +....+..+.-|-.+..+++++++.|.+.+..-..+|
T Consensus 258 ~~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~----------~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~v~~~~ 327 (361)
T 2zzv_A 258 LNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKA----------NLEAWPKYRQAGVEVIRLSNEDVRKFRRLAIPIWFKW 327 (361)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
Confidence 457999999999988877654332222211111 0011122233355577788888888877766554444
No 303
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.11 E-value=14 Score=29.48 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhhhhhhhhhhc
Q psy1990 166 LYCRVCDQWFTTLHNKREHLN 186 (382)
Q Consensus 166 ~~c~~c~q~fs~~hnk~eh~~ 186 (382)
.-|..|+..|++..+++.||.
T Consensus 19 y~C~~Cgk~F~~~~~L~~H~r 39 (102)
T 2ghf_A 19 YECKYCTFQTPDLNMFTFHVD 39 (102)
T ss_dssp EECSSCSCEESCHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 469999999999999999973
Done!