RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1991
(366 letters)
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 55.1 bits (133), Expect = 4e-11
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGW 318
+C CGK++ HLK H++ H+ + Y C +
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 47.0 bits (112), Expect = 3e-08
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 314 YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
+ C CG F L H + H+ R + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 27.4 bits (61), Expect = 0.28
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 344 FQCT--LCERAFSRSDHLSLHMKRH 366
F C C ++F+ HL HMK H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLH 26
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 51.2 bits (122), Expect = 1e-09
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
+K Y C CG F + RH H G RP+ C +C + F HL HMK H
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 41.2 bits (96), Expect = 5e-06
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
CGK++T S H+ H G +PY CG CG KF L H + H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53
Score = 30.8 bits (69), Expect = 0.023
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 278 RRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH 308
+ + CGK + HL H++ H
Sbjct: 23 SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 49.9 bits (119), Expect = 3e-09
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 299 SHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
+ +++ +K ++C + GC F R + H + H DR
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 35.3 bits (81), Expect = 5e-04
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
C GC KT+ + ++++H++TH ++
Sbjct: 19 FECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 33.4 bits (76), Expect = 0.002
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 333 RHFRKHTGDRPFQCTLCE--RAFSRSDHLSLHMKRH 366
+ K D+ F+C + F R ++ H++ H
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 49.4 bits (118), Expect = 4e-09
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
+ Y+C CG F+ S +L++H R HTG
Sbjct: 3 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG 37
Score = 44.4 bits (105), Expect = 2e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
R + R ++C C ++FS S LS H + H
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 31.7 bits (72), Expect = 0.007
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 289 NGCGKTYTKSSHLKAHLRTHTGE 311
+ CGK+++ SS L H RTHTGE
Sbjct: 16 DECGKSFSHSSDLSKHRRTHTGE 38
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 48.5 bits (116), Expect = 7e-09
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
C+ + CGK +T+S L+ H RTHTGEK
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 46.9 bits (112), Expect = 3e-08
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
+P+ C W CG +F RSDEL RH R HTG++
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 32.7 bits (75), Expect = 0.003
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 342 RPFQCTL--CERAFSRSDHLSLHMKRH 366
RPF CT C + F+RSD L H + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 48.5 bits (116), Expect = 7e-09
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
++PY C GC F R+ +L RH + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 43.9 bits (104), Expect = 3e-07
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
++C H GC K + ++ L H ++H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 34.6 bits (80), Expect = 6e-04
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 341 DRPFQCT--LCERAFSRSDHLSLHMKRH 366
DRP+ C C++AF R+ L H K H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 48.5 bits (116), Expect = 8e-09
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
H C+ GC K+Y++ +LK HLR+HTGE
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 45.4 bits (108), Expect = 1e-07
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
KP++C ++GC ++R + L H R HTG+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 31.9 bits (73), Expect = 0.005
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 342 RPFQCT--LCERAFSRSDHLSLHMKRH 366
+P +CT C +++SR ++L H++ H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 47.2 bits (113), Expect = 2e-08
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
H+GEKPY C CG F+RS L +H R HTG
Sbjct: 2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG 32
Score = 44.1 bits (105), Expect = 2e-07
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
H+G++P+ C C +AFSRS L H + H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 38.8 bits (91), Expect = 2e-05
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
+ C CGK +++SS L H R HTGE
Sbjct: 8 YGCVE--CGKAFSRSSILVQHQRVHTGE 33
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 47.3 bits (113), Expect = 2e-08
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
RTH+GEKPY+C C +F +S + H + +
Sbjct: 1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE 34
Score = 46.5 bits (111), Expect = 4e-08
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
R H+G++P++C +C F++S + +H+ +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 30.7 bits (70), Expect = 0.015
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 284 HTCSHNGCGKTYTKSSHLKAH-LRTHTGE 311
+ C C +T+S +K H L+ HT
Sbjct: 9 YECYI--CHARFTQSGTMKMHILQKHTEN 35
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 47.0 bits (112), Expect = 3e-08
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHT 339
+PY C + GC KFA+S L H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 46.2 bits (110), Expect = 5e-08
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHT 309
+ C +GC K + +S++LK+H+ TH
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 33.9 bits (78), Expect = 0.001
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 342 RPFQCTL--CERAFSRSDHLSLHMKRH 366
RP+ C C + F++S +L H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 47.0 bits (112), Expect = 3e-08
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
R TG KP+QC C F+RSD L H ++H
Sbjct: 2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36
Score = 45.5 bits (108), Expect = 1e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
R TG +PFQC C+R+FSRSDHL+LH KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.5 bits (64), Expect = 0.11
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTG 310
C +++++S HL H + H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRHML 36
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 46.5 bits (111), Expect = 4e-08
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTG 340
+PY C + C +F+RS +LTRH R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 45.8 bits (109), Expect = 8e-08
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTG 310
+ C C + +++S+ L H+R HTG
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 32.3 bits (74), Expect = 0.003
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 342 RPFQCT--LCERAFSRSDHLSLHMKRH 366
RP+ C C+R FSRS L+ H++ H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.2 bits (110), Expect = 5e-08
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
RTHTGEKPY C C F + L HF+++
Sbjct: 1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD 33
Score = 44.3 bits (105), Expect = 3e-07
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
R HTG++P+ C+ C++ F + L +H KR+
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 32.7 bits (75), Expect = 0.003
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 289 NGCGKTYTKSSHLKAHLRTHTGEK 312
+ C KT+ + L H + +
Sbjct: 12 SHCDKTFRQKQLLDMHFKRYHDPN 35
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 45.8 bits (109), Expect = 9e-08
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQC 316
+ C CGK +++ HL H++ HT E+P++C
Sbjct: 6 YICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 45.4 bits (108), Expect = 1e-07
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 309 TGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQCTL 348
+ KPY C CG F+R D L H ++ HT +RP +C +
Sbjct: 1 SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 36.9 bits (86), Expect = 1e-04
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 339 TGDRPFQCTLCERAFSRSDHLSLHMKRH 366
+ +P+ C C + FSR DHL+ H+K+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQV 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 45.4 bits (108), Expect = 9e-08
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
C+ GCGK ++ +L+ H+R HTG+
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 43.5 bits (103), Expect = 5e-07
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
KP+QC ++GCG +F+ L H R HTGD
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 29.6 bits (67), Expect = 0.042
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 342 RPFQCT--LCERAFSRSDHLSLHMKRH 366
+PFQCT C + FS +L H++ H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 42.2 bits (100), Expect = 1e-06
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
C C + + + HLK H R+HT EK
Sbjct: 3 FVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 38.8 bits (91), Expect = 2e-05
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
+ + C C FAR + L RH+R HT ++
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 37.2 bits (87), Expect = 8e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
R F C +C RAF+R +HL H + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 39.7 bits (93), Expect = 1e-05
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
+G++P+ + C F RH + HT
Sbjct: 2 SSGKRPFV--CRICLSAFTTKANCARHLKVHTD 32
Score = 38.6 bits (90), Expect = 3e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
+G RPF C +C AF+ + + H+K H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 31.6 bits (72), Expect = 0.009
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 288 HNGCGKTYTKSSHLKAHLRTHTGE 311
C +T ++ HL+ HT
Sbjct: 10 CRICLSAFTTKANCARHLKVHTDT 33
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 39.5 bits (93), Expect = 1e-05
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
+KP+QC + C F+RSD LT H R HTG
Sbjct: 1 QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28
Score = 36.4 bits (85), Expect = 1e-04
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTG 310
C C + +++S HL H+RTHTG
Sbjct: 4 FQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 36.4 bits (85), Expect = 1e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
+PFQC +C R FSRSDHL+ H++ H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 39.2 bits (92), Expect = 2e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEK 312
C K + +S HL H++TH +K
Sbjct: 8 CPKRFMRSDHLSKHIKTHQNKK 29
Score = 38.9 bits (91), Expect = 2e-05
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
K + C C +F RSD L++H + H +
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 33.9 bits (78), Expect = 0.001
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
+ F C C + F RSDHLS H+K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 37.1 bits (86), Expect = 7e-05
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKH 338
EKP+ C CG KFARSDE RH + H
Sbjct: 1 EKPFAC--DICGRKFARSDERKRHTKIH 26
Score = 35.2 bits (81), Expect = 4e-04
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 341 DRPFQCTLCERAFSRSDHLSLHMKRH 366
++PF C +C R F+RSD H K H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 34.9 bits (80), Expect = 6e-04
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHT 339
+KP+ C GCG +F D L H KH
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
Score = 34.1 bits (78), Expect = 0.001
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 341 DRPFQCTL--CERAFSRSDHLSLHMKRH 366
D+PF CT C + F+ DHL++H +H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
Score = 23.7 bits (51), Expect = 5.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHT 309
C+ GCG+ +T HL H H
Sbjct: 9 CTAPGCGQRFTNEDHLAVHKHKHE 32
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 32.3 bits (73), Expect = 0.005
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGE 311
CS CG Y K+ L+AHL HTGE
Sbjct: 6 CSFADCGAAYNKNWKLQAHLSKHTGE 31
Score = 25.7 bits (56), Expect = 1.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
K Y C + CG + ++ +L H KHTG+
Sbjct: 2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.8 bits (73), Expect = 0.005
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 289 NGCGKTYTKSSHLKAHLRTHT 309
CGK ++++S L H R HT
Sbjct: 6 LECGKAFSQNSGLINHQRIHT 26
Score = 31.0 bits (71), Expect = 0.010
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
+P++C C +AFS++ L H + H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 30.6 bits (70), Expect = 0.013
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHT 339
KPY+C CG F+++ L H R HT
Sbjct: 1 KPYKC--LECGKAFSQNSGLINHQRIHT 26
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.5 bits (71), Expect = 0.008
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
H C+ CGK + +SS LK H HTGE
Sbjct: 3 HVCAE--CGKAFVESSKLKRHQLVHTGE 28
Score = 25.4 bits (55), Expect = 1.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 321 CGWKFARSDELTRHFRKHTGD 341
CG F S +L RH HTG+
Sbjct: 8 CGKAFVESSKLKRHQLVHTGE 28
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 30.5 bits (69), Expect = 0.019
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 343 PFQCTLCERAFSRSDHLSLHMKR 365
P+ C LC RAF+R D L H ++
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQK 23
Score = 30.2 bits (68), Expect = 0.022
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 313 PYQCGWKGCGWKFARSDELTRHFRK-HTGD 341
PY CG C F R D L RH +K H+G+
Sbjct: 1 PYPCGL--CNRAFTRRDLLIRHAQKIHSGN 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 30.4 bits (68), Expect = 0.024
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPY 314
CGK + HL H +H+GEKPY
Sbjct: 11 CGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.5 bits (50), Expect = 7.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 321 CGWKFARSDELTRHFRKHTGDRPF 344
CG F L RH H+G++P+
Sbjct: 11 CGKIFRDVYHLNRHKLSHSGEKPY 34
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 30.0 bits (67), Expect = 0.025
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 343 PFQCTLCERAFSRSDHLSLHMKRH 366
P +C +C + FSR D L HM+ H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 25.8 bits (56), Expect = 0.74
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 291 CGKTYTKSSHLKAHLRTHTG 310
CGK +++ LK H+R HTG
Sbjct: 7 CGKCFSRKDKLKTHMRCHTG 26
Score = 25.8 bits (56), Expect = 0.96
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 313 PYQCGWKGCGWKFARSDELTRHFRKHTG 340
P++C + CG F+R D+L H R HTG
Sbjct: 1 PHKC--EVCGKCFSRKDKLKTHMRCHTG 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 30.0 bits (67), Expect = 0.028
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 341 DRPFQCTLCERAFSRSDHLSLHMKRH 366
+RPF+C +C A S L++H++ H
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSH 26
Score = 28.1 bits (62), Expect = 0.13
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
E+P++C + C + S +LT H R HTGD
Sbjct: 1 ERPFKC--QICPYASRNSSQLTVHLRSHTGD 29
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 29.6 bits (66), Expect = 0.038
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 341 DRPFQCTLCERAFSRSDHLSLHMKRH 366
++P+ C +C F R D +S H++ H
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 28.9 bits (64), Expect = 0.066
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
EKPY C CG +F R D ++ H R H G
Sbjct: 1 EKPYSC--PVCGLRFKRKDRMSYHVRSHDG 28
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger,
acid amylase [TaxId: 5061]}
Length = 381
Score = 32.7 bits (73), Expect = 0.056
Identities = 18/165 (10%), Positives = 44/165 (26%), Gaps = 8/165 (4%)
Query: 185 YSSLYLSPVTPSNPEFYPENYQYHHY--RDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHI 242
++++++SP+T P+ + YH Y + Y ++ + ++ + H +
Sbjct: 57 FTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALH----ARGM 112
Query: 243 HPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTY--TKSSH 300
+ + + S+ + +I + +
Sbjct: 113 YLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVS 172
Query: 301 LKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
L T T + W D L F
Sbjct: 173 LPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFP 217
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 28.7 bits (64), Expect = 0.082
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTG 310
+ C GC K YT S L+ H++T G
Sbjct: 3 YVCKLPGCTKRYTDPSSLRKHVKTVHG 29
Score = 24.4 bits (53), Expect = 3.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTG 340
KPY C GC ++ L +H + G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 28.5 bits (63), Expect = 0.100
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGE 311
C GC K +T HL H THTGE
Sbjct: 5 CKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 27.3 bits (60), Expect = 0.24
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
KP+ C +GC F LTRH HTG+
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.4 bits (63), Expect = 0.10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTH 308
C H GC K + +S ++ HL TH
Sbjct: 4 CPHKGCTKMFRDNSAMRKHLHTH 26
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 28.1 bits (63), Expect = 0.15
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 284 HTCSHNGC---GKTYTKSSHLKAHLRTHTGE 311
C GC + + L H+R HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 27.4 bits (61), Expect = 0.23
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 312 KPYQCGWKGC---GWKFARSDELTRHFRKHTGD 341
K + C W GC F L H R+HTG+
Sbjct: 1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 27.8 bits (61), Expect = 0.18
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
F C++C+ F R L LHM H
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSH 27
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 27.4 bits (60), Expect = 0.22
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTH 308
+ C H GC K ++ S LK H + H
Sbjct: 4 YECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 25.4 bits (55), Expect = 1.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKH 338
+ PY+C +GC +F+ L RH + H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.4 bits (61), Expect = 0.25
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
R + C+ C+R F + L HM H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 27.1 bits (60), Expect = 0.26
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
+ C CG K S LK H+RTHT +
Sbjct: 2 YICEE--CGIRAKKPSMLKKHIRTHTDVR 28
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus
oryzae, Taka-amylase [TaxId: 5062]}
Length = 381
Score = 30.4 bits (67), Expect = 0.35
Identities = 13/142 (9%), Positives = 39/142 (27%), Gaps = 4/142 (2%)
Query: 185 YSSLYLSPVTPSNPEFYPENYQYHHYRD-DYSLDIKYQPEYEHYRVNSSSHGNYNKLHIH 243
+++++++PVT P+ YH Y D Y + ++ ++
Sbjct: 57 FTAIWITPVTAQLPQTTAYGDAYHGYWQQDIY---SLNENYGTADDLKALSSALHERGMY 113
Query: 244 PYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKA 303
+ + ++ S+ + + I + + + +
Sbjct: 114 LMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSL 173
Query: 304 HLRTHTGEKPYQCGWKGCGWKF 325
T + + G
Sbjct: 174 PDLDTTKDVVKNEWYDWVGSLV 195
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 26.6 bits (58), Expect = 0.43
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 283 MHTCSHNGCGKTYTKSSHLKAHLRTHT 309
M+ C CGK + K + LK H +HT
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHT 27
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 25.1 bits (54), Expect = 1.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
++C LCER+F LS H + H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens),
mu [TaxId: 9606]}
Length = 278
Score = 28.2 bits (62), Expect = 1.6
Identities = 18/166 (10%), Positives = 42/166 (25%), Gaps = 4/166 (2%)
Query: 83 QDIIPN----VESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNE 138
+II V T ++ YI+ N + Y + I + + +E
Sbjct: 52 GNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHE 111
Query: 139 PLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNP 198
++ + + E ++ + Y + +
Sbjct: 112 NTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHE 171
Query: 199 EFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHP 244
+ + + D +V S S + L +H
Sbjct: 172 IREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHC 217
>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 32
Score = 24.8 bits (54), Expect = 1.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 316 CGWKGCGWKFARSDELTRH 334
C W GC +F ++L H
Sbjct: 4 CRWDGCSQEFDSQEQLVHH 22
>d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4
[TaxId: 10843]}
Length = 417
Score = 27.9 bits (62), Expect = 2.1
Identities = 13/70 (18%), Positives = 18/70 (25%), Gaps = 9/70 (12%)
Query: 203 ENYQYHHYRDDYSLDIKYQPEYEHYRVN-SSSHGNYNKLHIHPYYQTHHHTQIFQTPSIT 261
E + E + YR YN L P+Y PS
Sbjct: 318 EVSLKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYS--------ALPSTD 369
Query: 262 IKSSLLSKPK 271
+K +L
Sbjct: 370 LKDRVLVNTN 379
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 24.7 bits (53), Expect = 2.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEK 312
C K + +LK H R HTGEK
Sbjct: 6 CHKKFLSKYYLKVHNRKHTGEK 27
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 24.5 bits (53), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 284 HTCSHNGCGKTYTKSS-HLKAHLRTHTGE 311
+ C H GC K ++ +S K RTH+ E
Sbjct: 3 YMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 302
Score = 26.9 bits (58), Expect = 4.1
Identities = 10/76 (13%), Positives = 18/76 (23%), Gaps = 3/76 (3%)
Query: 2 MMCTQKLNSIGIQHCSI---KHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWH 58
+ + + + + A L L + + P+
Sbjct: 178 PVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATI 237
Query: 59 DIETVMSGEGPPVFID 74
IE G VF D
Sbjct: 238 AIEIEADGHDALVFCD 253
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 26.3 bits (57), Expect = 5.4
Identities = 18/138 (13%), Positives = 32/138 (23%), Gaps = 7/138 (5%)
Query: 167 NYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHY----RDDYSLDIKYQP 222
+N+YP S YS + E Y + Y D + L
Sbjct: 47 YWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITF 106
Query: 223 EYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKII 282
N + + + I + S L+ + + +
Sbjct: 107 HTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMAS---GQLSDALTGALFKIDIRGVGNV 163
Query: 283 MHTCSHNGCGKTYTKSSH 300
+TY S
Sbjct: 164 ALKEKWAAGPRTYLGLST 181
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase
{Bacillus stearothermophilus, maltogenic alpha-amylase
[TaxId: 1422]}
Length = 407
Score = 26.6 bits (57), Expect = 5.7
Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 14/191 (7%)
Query: 185 YSSLYLSPVTPSNPEFYP-ENYQYHHYR-DDYSLDIKYQPEYEHYRVNSSSHGNYNKLHI 242
++++LSPV + +N YH Y D+ ++ + + + I
Sbjct: 66 VTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVI 125
Query: 243 HPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNG-----------C 291
+ H + +L + N+ + +
Sbjct: 126 VDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQW 185
Query: 292 GKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCER 351
+ A L G +D L KH + F +L ++
Sbjct: 186 KNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHF-NSGFSKSLADK 244
Query: 352 AFSRSDHLSLH 362
+ + D +
Sbjct: 245 LYQKKDIFLVG 255
>d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha
chain {Escherichia coli [TaxId: 562]}
Length = 1074
Score = 26.7 bits (58), Expect = 5.9
Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 4/29 (13%)
Query: 273 RQNWSRRKIIMHTCSHN---GCG-KTYTK 297
RQ W KI+ T N C K Y K
Sbjct: 36 RQRWQHDKIVRSTHGVNCTGSCSWKIYVK 64
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 23.4 bits (50), Expect = 6.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 342 RPFQCTLCERAFSRSDHLSLHMKR 365
RPF+C C + +LS HMK+
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKK 24
>d1kqfa1 b.52.2.2 (A:851-1015) Formate dehydrogenase N, alpha
subunit {Escherichia coli [TaxId: 562]}
Length = 165
Score = 25.1 bits (54), Expect = 9.7
Identities = 8/65 (12%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 190 LSPVTPSNP--EFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQ 247
L P SNP Y ++ ++ + EH+ + + +
Sbjct: 12 LHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVE 71
Query: 248 THHHT 252
Sbjct: 72 ISETL 76
>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 275
Score = 25.5 bits (56), Expect = 9.9
Identities = 18/129 (13%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 112 KNKPPDQIVPNLLYSEIKKY---EDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNY 168
+ PP + N ++++++ +++ + AF +Y++ + Q L +
Sbjct: 16 THAPPGEF--NEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEH 73
Query: 169 NQYPSQHSID--SSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEY-- 224
+ +D + + L S+P+ +RD + D + Y
Sbjct: 74 GDLGNGRFLDPRNKISFKFDHLRK---EASDPQPEDTESALKQWRD--ACDSALR-AYVK 127
Query: 225 EHYRVNSSS 233
+HY +
Sbjct: 128 DHYPNGFCT 136
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.131 0.418
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,421,451
Number of extensions: 67628
Number of successful extensions: 371
Number of sequences better than 10.0: 1
Number of HSP's gapped: 356
Number of HSP's successfully gapped: 131
Length of query: 366
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 279
Effective length of database: 1,213,086
Effective search space: 338450994
Effective search space used: 338450994
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.6 bits)