BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1999
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RFR6|K319L_PONAB Dyslexia-associated protein KIAA0319-like protein OS=Pongo abelii
GN=KIAA0319L PE=2 SV=1
Length = 1049
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
V K DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L S ++ K V+MQ
Sbjct: 495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553
Query: 163 SKTPYLQLSNLELGE 177
+TP LQLS ++ G+
Sbjct: 554 VRTPTLQLSAMQEGD 568
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 93 RAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESL 152
+++ +N + ++ + PP A +V++ LP S L+G+ S+DD G+VSY WT E
Sbjct: 676 QSQSSVNVIVKEEI-NKPPIAKITGNVVITLPTSTAELDGSKSSDDKGIVSYLWTRDEGS 734
Query: 153 NQHKPVDMQKSKTPYLQLSNLELG 176
V P L LSNL G
Sbjct: 735 PAAGEVLNHSDHHPILFLSNLVEG 758
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 110 PPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQ 169
PP+A+AG D L LP + TL+G+ S+DD ++SY W E V ++ + +
Sbjct: 598 PPQADAGPDKELTLPVDSTTLDGSKSSDDQKIISYLW---EKTQGPDGVQLENANSSIAT 654
Query: 170 LSNLELG 176
++ L++G
Sbjct: 655 VTGLQVG 661
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 121 LYLPNSNVTLNGNMSTDDHGLVSYEW-TLRESLNQHKPVDMQKSKTPYLQLSNLELG 176
+ LP ++ ++G+ STDD +V Y W L+ L + K + T L+LS L G
Sbjct: 419 ISLPTTSTVIDGSQSTDDDKIVQYHWEELKGPLREEKISE----DTAILKLSKLVPG 471
>sp|Q8IZA0|K319L_HUMAN Dyslexia-associated protein KIAA0319-like protein OS=Homo sapiens
GN=KIAA0319L PE=1 SV=2
Length = 1049
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
V K DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L S ++ K V+MQ
Sbjct: 495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553
Query: 163 SKTPYLQLSNLELGE 177
+TP LQLS ++ G+
Sbjct: 554 VRTPTLQLSAMQEGD 568
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 93 RAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESL 152
+++ +N + ++ + PP A +V++ LP S L+G+ S+DD G+VSY WT E
Sbjct: 676 QSQSSVNVIVKEEI-NKPPIAKITGNVVITLPTSTAELDGSKSSDDKGIVSYLWTRDEGS 734
Query: 153 NQHKPVDMQKSKTPYLQLSNLELG 176
V P L LSNL G
Sbjct: 735 PAAGEVLNHSDHHPILFLSNLVEG 758
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 110 PPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQ 169
PP+A+AG D L LP + TL+G+ S+DD ++SY W E V ++ + +
Sbjct: 598 PPQADAGPDKELTLPVDSTTLDGSKSSDDQKIISYLW---EKTQGPDGVQLENANSSVAT 654
Query: 170 LSNLELG 176
++ L++G
Sbjct: 655 VTGLQVG 661
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 121 LYLPNSNVTLNGNMSTDDHGLVSYEW-TLRESLNQHKPVDMQKSKTPYLQLSNLELG 176
+ LP ++ ++G+ STDD +V Y W L+ L + K + T L+LS L G
Sbjct: 419 ISLPTTSTVIDGSQSTDDDKIVQYHWEELKGPLREEKISE----DTAILKLSKLVPG 471
>sp|Q8K135|K319L_MOUSE Dyslexia-associated protein KIAA0319-like protein OS=Mus musculus
GN=Kiaa0319l PE=1 SV=1
Length = 1048
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
V K DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L S ++ K V+MQ
Sbjct: 494 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 552
Query: 163 SKTPYLQLSNLELGE 177
+TP LQLS ++ G+
Sbjct: 553 VRTPALQLSAMQEGD 567
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 93 RAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESL 152
+++ +N + ++ + PP A +V++ LP S L+G+ S+DD G+VSY WT E+
Sbjct: 675 QSQSSVNVIVKEEI-NKPPVAKIAGNVVVTLPTSTAELDGSRSSDDKGIVSYLWTRDETS 733
Query: 153 NQHKPVDMQKSKTPYLQLSNLELG 176
V P L LSNL G
Sbjct: 734 PAAGEVLNHSDHHPVLFLSNLVEG 757
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 110 PPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEW 146
PP+A+AG D L LP + TL+G+ STDD +VSY W
Sbjct: 597 PPQADAGPDKELTLPVDSTTLDGSKSTDDQRVVSYLW 633
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 121 LYLPNSNVTLNGNMSTDDHGLVSYEW-TLRESLNQHKPVDMQKSKTPYLQLSNLELG 176
+ LP ++ ++G+ STDD +V Y W L+ L + K + T L+LS L G
Sbjct: 418 ISLPTTSTIIDGSQSTDDDKIVQYHWEELKGPLREEKISE----DTAILKLSKLVPG 470
>sp|Q5VV43|K0319_HUMAN Dyslexia-associated protein KIAA0319 OS=Homo sapiens GN=KIAA0319
PE=1 SV=1
Length = 1072
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 100 CFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVD 159
+V DYPP ANAG + + LP +++TLNGN S+DDH +V YEW+L ++ K V
Sbjct: 518 ALIVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGPG-SEGKHVV 576
Query: 160 MQKSKTPYLQLSNLELGE 177
MQ +TPYL LS ++ G+
Sbjct: 577 MQGVQTPYLHLSAMQEGD 594
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
V K + PP A AG +L LPN+++TL+G+ STDD +VSY W V
Sbjct: 711 VKKENNSPPRARAGGRHVLVLPNNSITLDGSRSTDDQRIVSYLWIRDGQSPAAGDVIDGS 770
Query: 163 SKTPYLQLSNLELG 176
+ LQL+NL G
Sbjct: 771 DHSVALQLTNLVEG 784
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 110 PPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQ 169
PP A AG D L P + TL+G+ S+DDHG+V Y W E + V+M+
Sbjct: 624 PPVAVAGPDKELIFPVESATLDGSSSSDDHGIVFYHW---EHVRGPSAVEMENIDKAIAT 680
Query: 170 LSNLELG 176
++ L++G
Sbjct: 681 VTGLQVG 687
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 121 LYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELG 176
L LP ++ ++G+ STDD +VSY W E +N + +P L+LSNL+ G
Sbjct: 445 LTLPLTSALIDGSQSTDDTEIVSYHW---EEINGPFIEEKTSVDSPVLRLSNLDPG 497
>sp|P0CI71|K0319_RAT Dyslexia-associated protein KIAA0319 homolog OS=Rattus norvegicus
PE=2 SV=1
Length = 1081
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 108 DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPY 167
DYPP ANAG + + LP + + LNGN S+DDH +V YEW + + K + MQ ++TPY
Sbjct: 535 DYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEW-FPDPGGESKEMVMQGAQTPY 593
Query: 168 LQLSNLELGE 177
L LS L+ GE
Sbjct: 594 LHLSELQEGE 603
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEW 146
V K + PP A AG +L LPN+++TL+G+ STDD G+VSY W
Sbjct: 720 VKKENNSPPRAQAGGRHVLMLPNNSITLDGSRSTDDRGIVSYLW 763
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 111 PEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQL 170
P A AG D L P + L+G+ S+DDHG+V Y W E + V+M+ +
Sbjct: 634 PVAVAGPDKELVFPVQSAMLDGSRSSDDHGIVCYRW---EHIRGPSAVEMENVDKAIATV 690
Query: 171 SNLELG 176
+ L++G
Sbjct: 691 TGLQVG 696
Score = 34.7 bits (78), Expect = 0.33, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 94 AEGKINCFLVTKVP----DYPPEANAGSDVI-LYLPNSNVTLNGNMSTDDHGLVSYEWTL 148
EG +N VT +P + PP A + L LP ++ ++G+ STDD +VSY W
Sbjct: 425 GEGYVN---VTVMPAARINQPPVAIVSPQIQELSLPLTSALIDGSQSTDDAEIVSYHW-- 479
Query: 149 RESLNQHKPVDMQKSKTPYLQLSNLELG 176
E ++ + +P L+LSNL+ G
Sbjct: 480 -EEVDGPFLGEAFLDDSPLLRLSNLDPG 506
>sp|Q5SZV5|K0319_MOUSE Dyslexia-associated protein KIAA0319 homolog OS=Mus musculus
GN=Kiaa0319 PE=2 SV=1
Length = 1081
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 108 DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPY 167
DYPP ANAG + + LP + + LNGN S+DDH +V YEW + K + MQ ++TPY
Sbjct: 535 DYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEWFAGPG-GESKEMVMQGAQTPY 593
Query: 168 LQLSNLELGE 177
L LS L+ GE
Sbjct: 594 LHLSELQEGE 603
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEW 146
V K + PP A AG +L LPN+++TL+G+ STDD G+VSY W
Sbjct: 720 VKKENNSPPRAQAGGRHVLILPNNSITLDGSRSTDDRGIVSYLW 763
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 111 PEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQL 170
P A AG D L P + TL+G+ S+DDHG+V Y W E + V+M+ +
Sbjct: 634 PVAVAGPDKELVFPVQSATLDGSRSSDDHGIVCYHW---EHIRGPSAVEMENVDKAIATV 690
Query: 171 SNLELG 176
+ L++G
Sbjct: 691 TGLQVG 696
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 94 AEGKINCFLVTKVP----DYPPEANAGSDVI-LYLPNSNVTLNGNMSTDDHGLVSYEWTL 148
EG +N VT +P + PP A L +P ++ ++G+ STDD +VSY W
Sbjct: 425 GEGYVN---VTVMPAARVNQPPVAVVSPQTQELSVPLTSALIDGSQSTDDTEIVSYHWEE 481
Query: 149 RES--LNQHKPVDMQKSKTPYLQLSNLELG 176
+ L + P D TP L+LSNL G
Sbjct: 482 VDGPFLGEEFPAD-----TPILRLSNLVPG 506
>sp|Q86VZ4|LRP11_HUMAN Low-density lipoprotein receptor-related protein 11 OS=Homo sapiens
GN=LRP11 PE=2 SV=2
Length = 500
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 48/148 (32%)
Query: 74 EQCVQTCCNDESCNI-------------------VFMYRAEGKINC----------FLVT 104
QCV CC++ C++ +F A G+ C + ++
Sbjct: 128 RQCVAACCSEPRCSVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLS 187
Query: 105 KVPD----------------YPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTL 148
+ PD PP + AG DV+L+LP V L+G STDDH +V YEW L
Sbjct: 188 RAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWAL 247
Query: 149 RESLNQHKPVDMQKSKTPYLQLSNLELG 176
L VDM+ ++ L+LS+L+ G
Sbjct: 248 ---LQGDPSVDMKVPQSGTLKLSHLQEG 272
>sp|Q8CB67|LRP11_MOUSE Low-density lipoprotein receptor-related protein 11 OS=Mus musculus
GN=Lrp11 PE=2 SV=1
Length = 483
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 44/145 (30%)
Query: 74 EQCVQTCCNDESCNIVFMYRAEG--------KINCFL----------------------- 102
QCV CC++ SC++ + G C+L
Sbjct: 114 RQCVTACCSEPSCSVAVVQLPRGPSVPAPMPAPRCYLFNCTARGRSVCKFAPLRGYRTYT 173
Query: 103 ------VTKVP-----DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRES 151
+P D PP + AG DV+L+LP V L+G S+DDH +V YEWTL++
Sbjct: 174 LSRAEDAAGIPPRPDEDKPPVSKAGKDVVLHLPTDGVVLDGRESSDDHAIVLYEWTLQQ- 232
Query: 152 LNQHKPVDMQKSKTPYLQLSNLELG 176
VDM+ + L+LS L+ G
Sbjct: 233 -GDPSSVDMKVPQPGTLRLSRLKEG 256
>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1
Length = 821
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 73 VEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYL 123
++ C + C N+ SC +F + G NCFL + + N GS + Y+
Sbjct: 360 LDSCKEFCHNNCSCLGLFFQNSSG--NCFLFDYIGSFKTSGNGGSGFVSYI 408
>sp|O08710|THYG_MOUSE Thyroglobulin OS=Mus musculus GN=Tg PE=1 SV=3
Length = 2766
Score = 30.8 bits (68), Expect = 4.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 64 VPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINC 100
VP P+ QC+ C NDE+C+ + + E +++C
Sbjct: 1592 VPSADSPLV--QCLTDCANDEACSFLTVSTMESEVSC 1626
>sp|Q6YQW3|RPOB_ONYPE DNA-directed RNA polymerase subunit beta OS=Onion yellows
phytoplasma (strain OY-M) GN=rpoB PE=3 SV=1
Length = 1273
Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 92 YRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDD-------HGLVSY 144
YRA C ++ + + +A +I PN NV+LNG D Y
Sbjct: 744 YRAAKDSGCLIIARESGFVTYVDAQKIIITKKPNQNVSLNGKTLYDTTQEFTYAQAKALY 803
Query: 145 EWTLRESLNQHKPVDMQKSK--TPYLQLSNLELGE 177
E +E ++ ++ KS T LQ + LGE
Sbjct: 804 ENNYKEHQAEYTLINFAKSNQDTLVLQKPIVVLGE 838
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,457,367
Number of Sequences: 539616
Number of extensions: 2772791
Number of successful extensions: 5600
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5560
Number of HSP's gapped (non-prelim): 38
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)