RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1999
         (177 letters)



>d1kala_ g.3.3.1 (A:) Kalata B1 {African plant (Oldenlandia
          affinis) [TaxId: 60225]}
          Length = 29

 Score = 22.3 bits (47), Expect = 7.6
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 63 VVPEEGLPMTVEQCVQTCCNDESCN 87
          V    GLP+  E CV   CN   C 
Sbjct: 4  VCTRNGLPVCGETCVGGTCNTPGCT 28


>d1nqja_ b.23.2.1 (A:) Class 1 collagenase {Bacteria (Clostridium
           histolyticum) [TaxId: 1498]}
          Length = 101

 Score = 23.8 bits (51), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 123 LPNSNVTLNGNMSTDD 138
           +PN N T+ G++  DD
Sbjct: 5   IPNFNTTMQGSLLGDD 20


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0589    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 628,899
Number of extensions: 27291
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 9
Length of query: 177
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 97
Effective length of database: 1,309,196
Effective search space: 126992012
Effective search space used: 126992012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.3 bits)