BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy20
(147 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307169872|gb|EFN62381.1| Lamin-C [Camponotus floridanus]
Length = 604
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 36 PQPQSQPP---RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
PQ S P RPGSPLSPT SR QEK +L+NLNDRLA YIE V+ L+ + + L +
Sbjct: 36 PQGTSTPIVGRRPGSPLSPTRYSRMQEKQDLQNLNDRLACYIEKVRHLETENSRLTREVQ 95
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +E+ T E +KA E E+ D RK LD + ++ L I+ +RL D+ DLK+K
Sbjct: 96 TTQETVTREVSNIKAMYEHELSDARKLLDETARERAKLEIDTKRLWDDNEDLKSK 150
>gi|332030883|gb|EGI70519.1| Lamin Dm0 [Acromyrmex echinatior]
Length = 610
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 36 PQPQSQPP---RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P + P RPGSPLSPT SR QEK +L+NLNDRLA YIE V+ L+ + + L +
Sbjct: 34 PPPTTSTPIGRRPGSPLSPTRYSRLQEKQDLQNLNDRLACYIEKVRHLETENSRLTREMQ 93
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +E+ T E +KA E E+ D RK LD + ++ L I+ +RL D+ D K+K
Sbjct: 94 TTQETVTREVSSIKAMYEHELSDARKLLDETARERAKLEIDTKRLWDDNEDFKSK 148
>gi|156544736|ref|XP_001605883.1| PREDICTED: lamin Dm0-like isoform 1 [Nasonia vitripennis]
Length = 603
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 69/104 (66%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
RPGSPLSPT SR QEK +L+NLNDRLA YI+ V+ L+++ + L + + +E+ T E
Sbjct: 36 RPGSPLSPTRYSRLQEKQDLQNLNDRLACYIDKVRHLESENSRLTREVQTSQETVTREIS 95
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+K+ E E+ D RK LD + ++ L I+ +RL D+ DLKNK
Sbjct: 96 NIKSMYEHELSDARKLLDETARERAKLEIDTKRLWDDNEDLKNK 139
>gi|345480744|ref|XP_003424206.1| PREDICTED: lamin Dm0-like isoform 2 [Nasonia vitripennis]
Length = 600
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 69/104 (66%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
RPGSPLSPT SR QEK +L+NLNDRLA YI+ V+ L+++ + L + + +E+ T E
Sbjct: 36 RPGSPLSPTRYSRLQEKQDLQNLNDRLACYIDKVRHLESENSRLTREVQTSQETVTREIS 95
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+K+ E E+ D RK LD + ++ L I+ +RL D+ DLKNK
Sbjct: 96 NIKSMYEHELSDARKLLDETARERAKLEIDTKRLWDDNEDLKNK 139
>gi|328706857|ref|XP_001943032.2| PREDICTED: lamin Dm0-like [Acyrthosiphon pisum]
Length = 583
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Query: 17 ASR-GSSSRQTSEVREEPPQPQ------PQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
ASR G ++R T PQP+ S+ R + LSPT SR QEK+EL+NLN+R
Sbjct: 5 ASRKGGAARNT-------PQPEESTASTTNSEKSRRTATLSPTRFSRIQEKHELQNLNNR 57
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
LA YI+ V+ L+ + + L L+S EE + E VK E E+ED+R ALDRE+ KS
Sbjct: 58 LAAYIDRVKYLETENSKLTQELHSSEEVTSREVSNVKVLFESELEDLRNALDREAKLKSR 117
Query: 130 LAIEKRRLLDELLDLKNK 147
L +E RR E+ +LK K
Sbjct: 118 LELESRRKTLEVEELKTK 135
>gi|328785544|ref|XP_396670.3| PREDICTED: lamin Dm0-like [Apis mellifera]
gi|380029157|ref|XP_003698248.1| PREDICTED: lamin Dm0-like [Apis florea]
Length = 597
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 36 PQPQSQP--PRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
PQ S P RPGSPLSPT SR QEK +L+NLNDRLA YI+ V+ L+++ + L + +
Sbjct: 20 PQFTSTPIGQRPGSPLSPTRYSRLQEKQDLQNLNDRLACYIDKVRHLESENSRLTREVQT 79
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+E+ T E +K+ E E+ D RK LD + ++ L I+ +RL D +LK+K
Sbjct: 80 TQETITREVSNIKSMYEHELSDARKLLDDTAKERAKLEIDTKRLWDNNEELKSK 133
>gi|383850116|ref|XP_003700663.1| PREDICTED: lamin Dm0-like [Megachile rotundata]
Length = 599
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 14 TPSASRGSSSRQTSEVREEPPQPQPQSQPP---RPGSPLSPTIISRRQEKNELKNLNDRL 70
T +A + +S+ TS PQ + P RPGSPLSPT SR QEK +L+NLNDRL
Sbjct: 3 TKAAKKSTSTSGTS-----GQSPQFSTSTPIGQRPGSPLSPTRYSRLQEKQDLQNLNDRL 57
Query: 71 AQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSAL 130
A YI+ V+ L+ + + L + + +E+ T E +K+ E E+ D RK LD + ++ L
Sbjct: 58 ACYIDKVRHLEAENSRLTREVQTTQETITREVSNIKSMYEHELSDARKLLDDTARERAKL 117
Query: 131 AIEKRRLLDELLDLKNK 147
I+ +RL D +LK+K
Sbjct: 118 EIDTKRLWDNNEELKSK 134
>gi|340722208|ref|XP_003399500.1| PREDICTED: lamin Dm0-like [Bombus terrestris]
Length = 599
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
AT T ++S G+ Q+S+ P Q RPGSPLSPT SR QEK +L+NLND
Sbjct: 5 ATKKSTAASSSGNV--QSSQFSTSTPIGQ------RPGSPLSPTRYSRLQEKQDLQNLND 56
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YI+ V+ L+ + + L + + +E+ T E +K+ E E+ D RK LD + ++
Sbjct: 57 RLACYIDKVRHLETENSRLTREVQTTQETITREVSNIKSMYEHELSDARKLLDDTARERA 116
Query: 129 ALAIEKRRLLDELLDLK 145
L I+ +RL D +LK
Sbjct: 117 KLEIDTKRLWDNNEELK 133
>gi|307195049|gb|EFN77107.1| Lamin Dm0 [Harpegnathos saltator]
Length = 602
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
RPGSPLSPT SR QEK +L+NLNDRLA YIE V+ L+ + + L + + +E+ T E
Sbjct: 52 RPGSPLSPTRYSRLQEKQDLQNLNDRLACYIEKVRHLETENSRLTREVQTTQETVTREVS 111
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLD 139
+K+ E E+ D RK LD + ++ L I+ +RLL+
Sbjct: 112 NIKSMYEHELSDARKLLDETARERAKLEIDTKRLLE 147
>gi|350396311|ref|XP_003484509.1| PREDICTED: lamin Dm0-like [Bombus impatiens]
Length = 599
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
RPGSPLSPT SR QEK +L+NLNDRLA YI+ V+ L+ + + L + + +E+ T E
Sbjct: 32 RPGSPLSPTRYSRLQEKQDLQNLNDRLACYIDKVRHLETENSRLTREVQTTQETITREVS 91
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+K+ E E+ D RK LD + ++ L I+ +RL D +LK
Sbjct: 92 NIKSMYEHELSDARKLLDDTARERAKLEIDTKRLWDNNEELK 133
>gi|289741009|gb|ADD19252.1| nuclear envelope protein lamin [Glossina morsitans morsitans]
Length = 623
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 34 PQPQPQSQPP-------RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAS 86
PQPQP S R SPLSPT SR QEK EL+NLNDRLA YI+ V+ L+ + A
Sbjct: 13 PQPQPGSSSTPLITGGNRSASPLSPTRHSRLQEKAELQNLNDRLAVYIDRVRNLETENAR 72
Query: 87 LEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
L + + ++ T E +K E E+ D R+ LD + K+ L I+ +RL +E +LK
Sbjct: 73 LSIEVQTTHDTVTREVTNIKTMYESELSDARRLLDDTAREKAKLEIDVKRLWEENEELKV 132
Query: 147 K 147
K
Sbjct: 133 K 133
>gi|158300735|ref|XP_320593.4| AGAP011938-PA [Anopheles gambiae str. PEST]
gi|157013303|gb|EAA00263.4| AGAP011938-PA [Anopheles gambiae str. PEST]
Length = 595
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS R+KR A TP + S+ Q S RP SPLSPT SR QEK
Sbjct: 1 MSQRAKRSG--ASTPVPVQASTPVQQSGSGATGASAAHHHHSARPASPLSPTRHSRLQEK 58
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
+L+NLNDRLA YI+ V+ L+ + + L + + +++ T E +K+ E E+ D RK L
Sbjct: 59 ADLQNLNDRLACYIDRVRYLEQENSRLTMEVRTSQDTTTREVSNIKSMYEHELSDARKLL 118
Query: 121 DRESSSKSALAIEKRRLLDELLDLKNK 147
D S K+ L I+ +R+L+E +LK +
Sbjct: 119 DDTSREKARLEIDGKRILEENDELKKR 145
>gi|91084795|ref|XP_972795.1| PREDICTED: similar to lamin [Tribolium castaneum]
gi|270008595|gb|EFA05043.1| hypothetical protein TcasGA2_TC015134 [Tribolium castaneum]
Length = 587
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 66/110 (60%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P QS P RP SPLSPT SR QEK +L+NLNDRLA YI+ V+ L+ + + L +
Sbjct: 11 PASQSVPARPSSPLSPTRHSRMQEKADLQNLNDRLAIYIDRVRYLEGENSRLTREVQKTH 70
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
ES T + +K+ + E+ + RK LD K+ L I+ +RL DE +LK
Sbjct: 71 ESVTRQVTDIKSMYDSELTEARKLLDESFREKAKLEIDTKRLWDENEELK 120
>gi|157136232|ref|XP_001656786.1| lamin [Aedes aegypti]
gi|108881054|gb|EAT45279.1| AAEL003415-PA [Aedes aegypti]
Length = 558
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q RP SPLSPT ++R QEK +L NLNDRLA YI+ V+ L+ + + L +
Sbjct: 21 PVQGTTPGIGARPSSPLSPTRLTRMQEKVDLMNLNDRLACYIDRVRFLEQENSRLTMEVR 80
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
S +E+ T E +K + E+ D RK LD + K+ L I+ +R+ +E DLK +
Sbjct: 81 SSQETVTREVSNIKQMYDHELNDARKLLDETAREKAKLEIDAKRIWEENEDLKKR 135
>gi|170047997|ref|XP_001851487.1| lamin [Culex quinquefasciatus]
gi|167870238|gb|EDS33621.1| lamin [Culex quinquefasciatus]
Length = 554
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%)
Query: 41 QPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
Q RP SPLSPT +SR QEK +L+ LNDRLA YI+ V+ L+ + + L + + +E+ T
Sbjct: 23 QQGRPQSPLSPTRLSRLQEKTDLQGLNDRLACYIDRVRFLEQENSRLTLEVRTSQETVTR 82
Query: 101 EFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E +K E E+ D RK LD + K+ L I+ +R+ +E DLK +
Sbjct: 83 EVSNIKQMYEHELTDARKLLDETAREKAKLEIDAKRIWEENDDLKKR 129
>gi|312372208|gb|EFR20221.1| hypothetical protein AND_20465 [Anopheles darlingi]
Length = 509
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
RP SPLSPT +SR QEK +L+ LNDRLA YI+ V+ L+ + L + + +E T E
Sbjct: 33 RPASPLSPTRLSRLQEKADLQGLNDRLAAYIDRVRFLEQENTRLSTEVTTSQEIVTREIT 92
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
VK+ E+E+ D RK LD S ++ L ++ +RL +E DLK +
Sbjct: 93 NVKSMYERELSDARKLLDETSRERAKLEMDAKRLWEENEDLKRR 136
>gi|32452113|emb|CAD38130.1| lamin type B [Acipenser baerii]
Length = 590
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLN 67
+ P TP AS G S+R+++ V P GS SPT +SR QEK EL+ LN
Sbjct: 2 ASMPTSTP-ASSGRSTRRSTGVGVSPA-----------GSGSSPTRLSRLQEKEELRQLN 49
Query: 68 DRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSK 127
DRLA YIE V+ L+ DKASL+ L E+S + E K++ E E+ D RK LD ++ +
Sbjct: 50 DRLANYIERVRSLETDKASLQLLLEDREQSSSREMGKIRLLYETELADARKLLDNTANER 109
Query: 128 SALAIE 133
+ L ++
Sbjct: 110 ARLQLQ 115
>gi|4886531|emb|CAB43347.1| lamin [Priapulus caudatus]
Length = 568
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
QS RP SPLSP I+R QEK ++ NLNDRLA YI+ V+ L+ + + L + EE+
Sbjct: 16 AQSTSTRPQSPLSPARITRLQEKEDMINLNDRLANYIDKVRNLETENSQLSIQVGESEET 75
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
T E VKA E+E+ D RK LD S K+ L I+
Sbjct: 76 ITREITNVKALYERELADARKLLDETSREKAKLLID 111
>gi|410034013|ref|XP_003308612.2| PREDICTED: intermediate filament protein ifa-1-like [Pan
troglodytes]
Length = 245
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 145 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 205 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 245
>gi|149064295|gb|EDM14498.1| rCG46767, isoform CRA_b [Rattus norvegicus]
Length = 514
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|149064296|gb|EDM14499.1| rCG46767, isoform CRA_c [Rattus norvegicus]
Length = 587
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|149064294|gb|EDM14497.1| rCG46767, isoform CRA_a [Rattus norvegicus]
Length = 245
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|47211800|emb|CAF92488.1| unnamed protein product [Tetraodon nigroviridis]
Length = 611
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P + P P SPLSP I+R QEK +L NLNDRLA YI+ V+ L+ + ASL + E +
Sbjct: 4 PSQKHPSPNSPLSPARITRLQEKKDLSNLNDRLAVYIDKVRSLEIENASLRMRITESEST 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + +KAA E E+ D R LD+ + ++ L +E +L +E +LK
Sbjct: 64 VSRDLSGIKAAYEAELADARTNLDQVAKERARLQLELSKLREEHKELK 111
>gi|157074106|ref|NP_001096765.1| lamin-B1 [Bos taurus]
gi|154425605|gb|AAI51305.1| LMNB1 protein [Bos taurus]
Length = 586
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRSGSRAGGPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|47211071|emb|CAF89686.1| unnamed protein product [Tetraodon nigroviridis]
Length = 708
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P++ P P SPLSP I+R QEK EL NLNDRLA YI+ V+ L+ + A L + E
Sbjct: 4 PKNAPRGPASPLSPNRITRLQEKEELSNLNDRLAVYIDKVRFLEAENAGLRLRITESETE 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D R+ LD + ++ L +E +L +E +L+
Sbjct: 64 VSRELTGLKAAYEAELADARQTLDSVAKERAHLQLELGKLREEHKELR 111
>gi|296485609|tpg|DAA27724.1| TPA: lamin B1 [Bos taurus]
Length = 547
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRSGSRAGGPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|335283403|ref|XP_003123930.2| PREDICTED: lamin-B1 [Sus scrofa]
Length = 586
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQSRTGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|444741701|ref|NP_001263282.1| lamin-B2 [Bos taurus]
gi|297476855|ref|XP_002688997.1| PREDICTED: lamin-B2 [Bos taurus]
gi|296485637|tpg|DAA27752.1| TPA: lamin B2 [Bos taurus]
Length = 628
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
PQP + P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + L+ + E
Sbjct: 28 PQP-GRAGGPSTPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLQLKISERE 86
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE +L EL
Sbjct: 87 EVTTREVSGIKTLYEAELADARRVLDETARDRACLQIEMGKLRAEL 132
>gi|16758782|ref|NP_446357.1| lamin-B1 [Rattus norvegicus]
gi|17865475|sp|P70615.3|LMNB1_RAT RecName: Full=Lamin-B1; Flags: Precursor
gi|1575794|gb|AAB09600.1| lamin B1 [Rattus norvegicus]
Length = 587
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P Q + S+ P +P SPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQQRAGSRASAPATPFSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|403293747|ref|XP_003937873.1| PREDICTED: prelamin-A/C [Saimiri boliviensis boliviensis]
Length = 810
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 165 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 224
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 225 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 265
>gi|426229265|ref|XP_004008711.1| PREDICTED: lamin-B1 [Ovis aries]
Length = 586
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRSGSRAGGPSTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|431908006|gb|ELK11613.1| Lamin-B1 [Pteropus alecto]
Length = 576
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRTGSRAGGPSTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|291230010|ref|XP_002734960.1| PREDICTED: lamin A/C-like [Saccoglossus kowalevskii]
Length = 577
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SPLSPT ISR QEKN++ +LNDRLA YIE V++L+ + + L + IEE+ + E +K
Sbjct: 27 SPLSPTRISRLQEKNDMIDLNDRLAAYIERVRQLETENSRLTTKVTKIEETQSREVTNLK 86
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ E E+ + R+ LD S K+ L IE + + L+L+++
Sbjct: 87 SLYESELSETRRLLDSTSKEKARLQIEHDKWKTQALELQSR 127
>gi|1346413|sp|P48679.1|LMNA_RAT RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
Length = 665
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q +P R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRPTRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|386780760|ref|NP_001247777.1| lamin-B1 [Macaca mulatta]
gi|402872393|ref|XP_003900101.1| PREDICTED: lamin-B1 [Papio anubis]
gi|383409681|gb|AFH28054.1| lamin-B1 isoform 1 [Macaca mulatta]
gi|387540388|gb|AFJ70821.1| lamin-B1 isoform 1 [Macaca mulatta]
Length = 586
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRTGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|296193836|ref|XP_002744688.1| PREDICTED: lamin-B1 [Callithrix jacchus]
Length = 587
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRTGSRTGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|126307648|ref|XP_001367335.1| PREDICTED: prelamin-A/C isoform 2 [Monodelphis domestica]
Length = 633
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
S P +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE +
Sbjct: 12 SGAPAGSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVS 71
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 72 REVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|126307646|ref|XP_001367284.1| PREDICTED: prelamin-A/C isoform 1 [Monodelphis domestica]
Length = 663
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
S P +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE +
Sbjct: 12 SGAPAGSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVS 71
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 72 REVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|343959446|dbj|BAK63580.1| lamin-B1 [Pan troglodytes]
Length = 586
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|395817655|ref|XP_003782279.1| PREDICTED: lamin-B1 [Otolemur garnettii]
Length = 746
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 166 PVPPGGGSRTGGPSTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 225
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 226 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 266
>gi|291387267|ref|XP_002710222.1| PREDICTED: lamin B1 [Oryctolagus cuniculus]
Length = 587
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRSGSRAGAPTTPLSPTRMSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|5031877|ref|NP_005564.1| lamin-B1 isoform 1 [Homo sapiens]
gi|125953|sp|P20700.2|LMNB1_HUMAN RecName: Full=Lamin-B1; Flags: Precursor
gi|307106|gb|AAA36162.1| lamin B [Homo sapiens]
gi|576840|gb|AAC37575.1| lamin B1 [Homo sapiens]
gi|74354337|gb|AAI03724.1| Lamin B1 [Homo sapiens]
gi|119569231|gb|EAW48846.1| lamin B1, isoform CRA_b [Homo sapiens]
gi|189069155|dbj|BAG35493.1| unnamed protein product [Homo sapiens]
gi|261858378|dbj|BAI45711.1| lamin B1 [synthetic construct]
Length = 586
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|332821824|ref|XP_001158070.2| PREDICTED: lamin-B1 isoform 1 [Pan troglodytes]
gi|397512803|ref|XP_003826726.1| PREDICTED: lamin-B1 [Pan paniscus]
gi|410221384|gb|JAA07911.1| lamin B1 [Pan troglodytes]
gi|410258478|gb|JAA17206.1| lamin B1 [Pan troglodytes]
gi|410298726|gb|JAA27963.1| lamin B1 [Pan troglodytes]
gi|410334687|gb|JAA36290.1| lamin B1 [Pan troglodytes]
Length = 586
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|395845167|ref|XP_003795314.1| PREDICTED: prelamin-A/C [Otolemur garnettii]
Length = 664
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 31 EEPPQPQPQSQPPRPGS-PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEY 89
E P Q + + GS PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L
Sbjct: 2 ETPSQRRATRSGAQAGSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRL 61
Query: 90 SLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 62 RITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|15126742|gb|AAH12295.1| Lamin B1 [Homo sapiens]
gi|123981378|gb|ABM82518.1| lamin B1 [synthetic construct]
gi|157928174|gb|ABW03383.1| lamin B1 [synthetic construct]
Length = 586
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|426349804|ref|XP_004042476.1| PREDICTED: lamin-B1 isoform 1 [Gorilla gorilla gorilla]
Length = 586
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|297675879|ref|XP_002815878.1| PREDICTED: lamin-B1 [Pongo abelii]
Length = 586
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|397500859|ref|XP_003821122.1| PREDICTED: prelamin-A/C [Pan paniscus]
Length = 790
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 145 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 205 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 245
>gi|119573383|gb|EAW52998.1| lamin A/C, isoform CRA_c [Homo sapiens]
Length = 790
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 145 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 205 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 245
>gi|119573385|gb|EAW53000.1| lamin A/C, isoform CRA_d [Homo sapiens]
Length = 760
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 145 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 205 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 243
>gi|332221605|ref|XP_003259953.1| PREDICTED: lamin-B1 [Nomascus leucogenys]
Length = 587
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|119573381|gb|EAW52996.1| lamin A/C, isoform CRA_a [Homo sapiens]
Length = 698
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 145 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 205 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 245
>gi|50415798|gb|AAH78178.1| LMNB1 protein, partial [Homo sapiens]
Length = 333
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|383110|prf||1902227A lamin A
Length = 665
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q +P R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRPTRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEPELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|119569230|gb|EAW48845.1| lamin B1, isoform CRA_a [Homo sapiens]
Length = 329
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 EREEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 106
>gi|198416337|ref|XP_002119169.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 465
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 33 PPQPQPQSQPPR-PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
P+ Q +S+ P +PLSP+I SR+ E+++L NLN+R+A Y+E V+ L+ + + L+ +
Sbjct: 3 TPKQQTRSRDKECPSTPLSPSISSRKDERDQLANLNNRMAAYVEKVRSLETENSRLQIKV 62
Query: 92 YSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
S EE+ T E +KA E+EI + R+ LD S K+ L IE
Sbjct: 63 TSYEETSTREVTSLKAMYEREISEARRLLDELSKEKAQLQIE 104
>gi|293689|gb|AAC96023.1| lamin B [Mus musculus]
Length = 587
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 35 QPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 9 QQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTER 68
Query: 95 EESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 69 EEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 107
>gi|52869|emb|CAA34677.1| unnamed protein product [Mus musculus]
Length = 588
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 35 QPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 9 QQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTER 68
Query: 95 EESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 69 EEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 107
>gi|188219589|ref|NP_034851.2| lamin-B1 [Mus musculus]
gi|17865719|sp|P14733.3|LMNB1_MOUSE RecName: Full=Lamin-B1; Flags: Precursor
gi|1398996|dbj|BAA08784.1| lamin B1 [Mus musculus]
gi|30931159|gb|AAH52729.1| Lmnb1 protein [Mus musculus]
gi|34849832|gb|AAH58392.1| Lmnb1 protein [Mus musculus]
gi|148677925|gb|EDL09872.1| lamin B1, isoform CRA_a [Mus musculus]
Length = 588
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 35 QPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
Q + S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 9 QQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTER 68
Query: 95 EESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 69 EEVRGRELTGLKALYETELADARRALDDTARERAKLQIE 107
>gi|348550535|ref|XP_003461087.1| PREDICTED: lamin-B2-like [Cavia porcellus]
Length = 610
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYS 93
P P S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S
Sbjct: 4 PLP-SRAGGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--E 60
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
EE T E +KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 61 REEVTTREVSGIKALYESELADARRVLDETACERARLQIEMGKLRAEL 108
>gi|26348034|dbj|BAC37665.1| unnamed protein product [Mus musculus]
Length = 413
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 33 PPQPQ-PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
P Q Q S+ P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 6 PVQQQRAGSRASAPATPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQV 65
Query: 92 YSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
EE E +KA E E+ D R+ALD + ++ L IE
Sbjct: 66 TEREEVRGHELTGLKALYETELADARRALDDTARERAKLQIE 107
>gi|301783137|ref|XP_002927000.1| PREDICTED: LOW QUALITY PROTEIN: lamin-A/C-like [Ailuropoda
melanoleuca]
Length = 799
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 153 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 212
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 213 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 253
>gi|417412444|gb|JAA52609.1| Putative nuclear envelope protein lamin intermediate filament
superfamily, partial [Desmodus rotundus]
Length = 719
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 74 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVISREVSGIK 133
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 134 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 172
>gi|351711713|gb|EHB14632.1| Lamin-B2 [Heterocephalus glaber]
Length = 799
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 42 PPRPG---SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH 98
P R G +PLSPT +SR QEK EL+ LNDRLA YI+ V+ L+ + L + EE
Sbjct: 26 PSRAGGSATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEREEVT 85
Query: 99 TTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
T E +KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 86 TREVSGIKALYESELADARRVLDETACERARLQIEMGKLRAEL 128
>gi|392341331|ref|XP_001076027.3| PREDICTED: lamin-B2-like [Rattus norvegicus]
gi|392349219|ref|XP_216850.6| PREDICTED: lamin-B2-like [Rattus norvegicus]
Length = 616
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Query: 40 SQPPRPGS--PLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PPR GS PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+NDK L S E
Sbjct: 21 SLPPRAGSATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDKLLLRIS--EKE 78
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 79 EVTTREVSGIKTLYESELADARRVLDETARERARLQIEIGKVQAEL 124
>gi|34228|emb|CAA27173.1| unnamed protein product [Homo sapiens]
gi|224901|prf||1203377A lamin A
Length = 702
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 119
>gi|440903635|gb|ELR54272.1| Prelamin-A/C [Bos grunniens mutus]
Length = 665
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SPLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 SPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|410911616|ref|XP_003969286.1| PREDICTED: lamin-A-like [Takifugu rubripes]
Length = 648
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P+S P SPLSP I+R QEK EL NLNDRLA YI+ V+ L+ + A L + E
Sbjct: 4 PKSTPRGANSPLSPNRITRLQEKEELSNLNDRLAVYIDKVRFLEAENAGLRLRITESETE 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D R+ LD + ++ L +E +L ++ +LK
Sbjct: 64 VSRELTGLKAAYEAELADARRTLDSVAKERAHLQLELGKLREDHKELK 111
>gi|154426282|ref|NP_001093902.1| nuclear lamin [Ciona intestinalis]
gi|10803351|emb|CAC13105.1| nuclear lamin [Ciona intestinalis]
Length = 465
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 33 PPQPQPQSQPPR-PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
P+ Q +S+ P +PLSP+I SR+ E+++L NLN+R+A Y+E V+ L+ + + L+ +
Sbjct: 3 TPKQQTRSRDKECPSTPLSPSISSRKDERDQLANLNNRMAAYVEKVRSLETENSRLQIKV 62
Query: 92 YSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
S EE+ T E +KA E+EI + R+ LD S K+ L IE
Sbjct: 63 TSYEETSTREVISLKAMYEREISEARRLLDELSKEKAQLQIE 104
>gi|354488701|ref|XP_003506506.1| PREDICTED: lamin-B2 [Cricetulus griseus]
gi|344247045|gb|EGW03149.1| Lamin-B2 [Cricetulus griseus]
Length = 602
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Query: 40 SQPPR--PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PPR P +PLSP +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L S E
Sbjct: 3 SLPPRAGPATPLSPARLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRIS--EKE 60
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 61 EVTTREVSGIKALYESELADARRVLDETARERARLQIEMGKLQAEL 106
>gi|395831353|ref|XP_003788767.1| PREDICTED: lamin-B2 [Otolemur garnettii]
Length = 605
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLAQYI+ V+ +L+ND+ L+ S EE T E
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAQYIDRVRALELENDRLLLKIS--EKEEVTTREV 69
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 70 SGIKALYESELADARRVLDETARERARLQIELGKLRAEL 108
>gi|74220666|dbj|BAE31539.1| unnamed protein product [Mus musculus]
Length = 642
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 87 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 146
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK +
Sbjct: 147 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKAR 187
>gi|13161382|dbj|BAB32977.1| lamin B3 [Carassius auratus]
Length = 589
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
S +SPT ++R QEK +L+ LNDRLA YIE V++L+NDK+SL+ + EE E V+
Sbjct: 25 SGVSPTRLTRLQEKEDLRQLNDRLANYIERVRQLENDKSSLQLLVEEKEEVTRREVGSVR 84
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E E+ D RKALD ++ ++ L IE +L +E
Sbjct: 85 RLYETELADARKALDATANERARLQIELTQLQEE 118
>gi|27436948|ref|NP_733822.1| lamin isoform A-delta10 [Homo sapiens]
Length = 634
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|57014043|gb|AAW32538.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|332220702|ref|XP_003259493.1| PREDICTED: prelamin-A/C [Nomascus leucogenys]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|27436946|ref|NP_733821.1| lamin isoform A [Homo sapiens]
gi|426332019|ref|XP_004026990.1| PREDICTED: prelamin-A/C [Gorilla gorilla gorilla]
gi|125962|sp|P02545.1|LMNA_HUMAN RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
AltName: Full=70 kDa lamin; AltName: Full=Renal
carcinoma antigen NY-REN-32; Flags: Precursor
gi|54035059|gb|AAH14507.1| Lamin A/C [Homo sapiens]
gi|190690113|gb|ACE86831.1| lamin A/C protein [synthetic construct]
gi|190691485|gb|ACE87517.1| lamin A/C protein [synthetic construct]
gi|261857464|dbj|BAI45254.1| lamin A/C [synthetic construct]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|148727282|ref|NP_001092024.1| prelamin-A/C [Pan troglodytes]
gi|146741476|dbj|BAF62394.1| lamin A/C, transcript variant 1 [Pan troglodytes verus]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|383872517|ref|NP_001244822.1| prelamin-A/C [Macaca mulatta]
gi|402856566|ref|XP_003892858.1| PREDICTED: prelamin-A/C [Papio anubis]
gi|355558555|gb|EHH15335.1| hypothetical protein EGK_01409 [Macaca mulatta]
gi|355745734|gb|EHH50359.1| hypothetical protein EGM_01175 [Macaca fascicularis]
gi|380812724|gb|AFE78236.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
gi|383418339|gb|AFH32383.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
gi|384947022|gb|AFI37116.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
Length = 663
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|57014047|gb|AAW32540.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|354481556|ref|XP_003502967.1| PREDICTED: prelamin-A/C-like isoform 2 [Cricetulus griseus]
Length = 662
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|74204231|dbj|BAE39876.1| unnamed protein product [Mus musculus]
Length = 574
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
AA E E+ D RK LD + ++ L +E ++ +E +LK++
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKDR 119
>gi|431892313|gb|ELK02753.1| Lamin-A/C [Pteropus alecto]
Length = 748
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELSDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|395729686|ref|XP_002810085.2| PREDICTED: prelamin-A/C [Pongo abelii]
Length = 664
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|39653934|gb|AAR29466.1| progerin [Homo sapiens]
Length = 614
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|24653664|ref|NP_523742.2| lamin C, isoform A [Drosophila melanogaster]
gi|73920222|sp|Q03427.2|LAMC_DROME RecName: Full=Lamin-C; AltName: Full=pG-IF
gi|7303173|gb|AAF58237.1| lamin C, isoform A [Drosophila melanogaster]
gi|20152029|gb|AAM11374.1| LD31805p [Drosophila melanogaster]
gi|220945992|gb|ACL85539.1| LamC-PA [synthetic construct]
gi|220955724|gb|ACL90405.1| LamC-PA [synthetic construct]
Length = 621
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 25 STSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|444719052|gb|ELW59852.1| Prelamin-A/C [Tupaia chinensis]
Length = 665
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|344286896|ref|XP_003415192.1| PREDICTED: prelamin-A/C isoform 2 [Loxodonta africana]
Length = 634
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|531500|emb|CAA53480.1| nuclear lamin C protein [Drosophila melanogaster]
Length = 621
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 25 STSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|354481558|ref|XP_003502968.1| PREDICTED: prelamin-A/C-like isoform 3 [Cricetulus griseus]
Length = 633
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|157808|gb|AAA28666.1| lamin C like protein [Drosophila melanogaster]
Length = 621
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 25 STSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|442623692|ref|NP_001260974.1| lamin C, isoform B [Drosophila melanogaster]
gi|440214389|gb|AGB93506.1| lamin C, isoform B [Drosophila melanogaster]
Length = 640
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++ E +K
Sbjct: 34 SPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLK 93
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 94 AVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|73960920|ref|XP_864434.1| PREDICTED: prelamin-A/C isoform 4 [Canis lupus familiaris]
Length = 665
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|344286894|ref|XP_003415191.1| PREDICTED: prelamin-A/C isoform 1 [Loxodonta africana]
Length = 664
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|338724951|ref|XP_003365048.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 633
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|195150448|ref|XP_002016166.1| GL10641 [Drosophila persimilis]
gi|194110013|gb|EDW32056.1| GL10641 [Drosophila persimilis]
Length = 616
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT SR QEK EL++LNDRLA YI+ ++ L+N+ + L L+ +++ E +K
Sbjct: 34 SPTSPTRTSRIQEKEELQHLNDRLACYIDRMRNLENENSRLTQELHLSQDTVNRETSNLK 93
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 94 AVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|126323623|ref|XP_001372674.1| PREDICTED: lamin-B2 [Monodelphis domestica]
Length = 608
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
PG+PLSP ISR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 16 PGTPLSPARISRLQEKEELRELNDRLAHYIDRVRALELENDRLLLQVS--EKEEVTTREV 73
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+K E E+ D R+ LD + ++ L IE +L EL
Sbjct: 74 SGIKVLYESELADARRVLDETARERAKLQIEIGKLRAEL 112
>gi|296229150|ref|XP_002760137.1| PREDICTED: prelamin-A/C isoform 1 [Callithrix jacchus]
Length = 664
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|390476838|ref|XP_003735190.1| PREDICTED: prelamin-A/C isoform 2 [Callithrix jacchus]
Length = 614
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|348579324|ref|XP_003475430.1| PREDICTED: prelamin-A/C-like [Cavia porcellus]
Length = 624
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELGKVREEFKELK 117
>gi|194755882|ref|XP_001960208.1| GF11640 [Drosophila ananassae]
gi|190621506|gb|EDV37030.1| GF11640 [Drosophila ananassae]
Length = 623
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR QEK EL++LNDRLA YI+ ++ L+N+ + L L+ +++
Sbjct: 25 STSSRVGATSPTSPTRTSRLQEKEELQHLNDRLACYIDRMRNLENENSRLTQELHLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E +KA EKE+ RK LD + K+ L I+ +R +E DLK +
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDSKRWWEENDDLKQR 134
>gi|125808013|ref|XP_001360601.1| GA10086 [Drosophila pseudoobscura pseudoobscura]
gi|54635773|gb|EAL25176.1| GA10086 [Drosophila pseudoobscura pseudoobscura]
Length = 622
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT SR QEK EL++LNDRLA YI+ ++ L+N+ + L L+ +++ E +K
Sbjct: 34 SPTSPTRTSRIQEKEELQHLNDRLACYIDRMRNLENENSRLTQELHLSQDTVNRETSNLK 93
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 94 AVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|410925695|ref|XP_003976315.1| PREDICTED: lamin-L(III)-like [Takifugu rubripes]
Length = 593
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 62/94 (65%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
S +SPT SR QEK++L++LNDRLA YI+ VQ+L+++++ + L +ES + E V+
Sbjct: 31 SSMSPTCQSRSQEKDDLRHLNDRLANYIQRVQELESERSCMLLQLEEKDESKSREMGNVR 90
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E+E+ D+R++LD + K+ L I+ L D+
Sbjct: 91 RLYEEELADVRRSLDEVAGEKARLQIDCGNLCDD 124
>gi|149048132|gb|EDM00708.1| lamin A, isoform CRA_b [Rattus norvegicus]
Length = 665
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|149751388|ref|XP_001499971.1| PREDICTED: prelamin-A/C isoform 2 [Equus caballus]
Length = 613
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|344306977|ref|XP_003422159.1| PREDICTED: lamin-B2 [Loxodonta africana]
Length = 655
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 13 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 70
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 71 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 109
>gi|149751386|ref|XP_001499938.1| PREDICTED: prelamin-A/C isoform 1 [Equus caballus]
Length = 663
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|74148166|dbj|BAE36246.1| unnamed protein product [Mus musculus]
Length = 665
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|354481554|ref|XP_003502966.1| PREDICTED: prelamin-A/C-like isoform 1 [Cricetulus griseus]
Length = 664
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|355699521|gb|AES01155.1| lamin A/C [Mustela putorius furo]
Length = 583
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 35 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 94
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 95 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 133
>gi|332255880|ref|XP_003277054.1| PREDICTED: lamin-B2 [Nomascus leucogenys]
Length = 616
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|162287370|ref|NP_001002011.2| prelamin-A/C isoform A [Mus musculus]
gi|85700428|sp|P48678.2|LMNA_MOUSE RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
gi|1794159|dbj|BAA08569.1| lamin A [Mus musculus domesticus]
gi|15929761|gb|AAH15302.1| Lamin A [Mus musculus]
gi|62739248|gb|AAH94020.1| Lamin A [Mus musculus]
gi|74151192|dbj|BAE27717.1| unnamed protein product [Mus musculus]
gi|112378771|gb|ABI16251.1| lamin A [Mus musculus]
gi|148683328|gb|EDL15275.1| lamin A, isoform CRA_a [Mus musculus]
Length = 665
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|12835914|dbj|BAB23415.1| unnamed protein product [Mus musculus]
Length = 665
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|52782237|dbj|BAD51965.1| lamin A/C [Macaca fascicularis]
gi|84579053|dbj|BAE72960.1| hypothetical protein [Macaca fascicularis]
Length = 571
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|390478357|ref|XP_003735487.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B2 [Callithrix jacchus]
Length = 620
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|410264878|gb|JAA20405.1| lamin B2 [Pan troglodytes]
Length = 620
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|402903641|ref|XP_003914670.1| PREDICTED: lamin-B2 [Papio anubis]
Length = 621
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|5031875|ref|NP_005563.1| lamin isoform C [Homo sapiens]
gi|34236|emb|CAA27174.1| unnamed protein product [Homo sapiens]
gi|307108|gb|AAA36164.1| lamin C protein [Homo sapiens]
gi|12653479|gb|AAH00511.1| Lamin A/C [Homo sapiens]
gi|13111979|gb|AAH03162.1| Lamin A/C [Homo sapiens]
gi|119573382|gb|EAW52997.1| lamin A/C, isoform CRA_b [Homo sapiens]
gi|119573384|gb|EAW52999.1| lamin A/C, isoform CRA_b [Homo sapiens]
gi|190689641|gb|ACE86595.1| lamin A/C protein [synthetic construct]
gi|190691003|gb|ACE87276.1| lamin A/C protein [synthetic construct]
Length = 572
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|410903223|ref|XP_003965093.1| PREDICTED: lamin-B1-like [Takifugu rubripes]
Length = 584
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
G+PLSPT ISR QEK +L++LNDRLA YI+ V+ L+++ L + EE + E +
Sbjct: 19 GTPLSPTRISRLQEKQQLRDLNDRLAVYIDKVRSLESENEVLHLQINEREEDKSREVTSL 78
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIE 133
KA E E+ D R+ LD S ++ L IE
Sbjct: 79 KALYETELADARRCLDDSSKERAWLQIE 106
>gi|388240801|ref|NP_116126.3| lamin-B2 [Homo sapiens]
gi|119589784|gb|EAW69378.1| lamin B2, isoform CRA_a [Homo sapiens]
Length = 620
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|443704182|gb|ELU01357.1| hypothetical protein CAPTEDRAFT_182411 [Capitella teleta]
Length = 606
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P Q P SPT+ISR QEK EL LNDRLA YI+ V+ L+N+ L + + E
Sbjct: 21 PASSKQSPGRSRASSPTMISRMQEKTELAGLNDRLAVYIDRVRYLENENGRLTKQITTHE 80
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ E +K E E+ D RK LD S K+ L IE +L E ++ K K
Sbjct: 81 ETIQREVTSIKRLYESELGDARKLLDDTSKDKARLQIEVGKLKAENVEYKEK 132
>gi|18076211|emb|CAC81063.1| Lamin [Molgula oculata]
Length = 461
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSP + SR+ EK ++ NLN+R+A Y+E V+ L+N+ + L Y + + EE+ E +K
Sbjct: 11 TPLSPAVASRKHEKEQMVNLNNRMAVYVEKVRSLENENSQLTYQVSTYEETSKREVTNIK 70
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRL 137
A E E+ +RK+ D + K+AL +E + L
Sbjct: 71 AVYENELNAMRKSYDAVCNEKAALELENQGL 101
>gi|30584609|gb|AAP36557.1| Homo sapiens lamin A/C [synthetic construct]
gi|60652591|gb|AAX28990.1| lamin A/C [synthetic construct]
gi|60652593|gb|AAX28991.1| lamin A/C [synthetic construct]
Length = 573
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|242004520|ref|XP_002423131.1| Lamin-C, putative [Pediculus humanus corporis]
gi|212506077|gb|EEB10393.1| Lamin-C, putative [Pediculus humanus corporis]
Length = 623
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
Q RP SPLSPT +SR QEK EL+NLNDRLA Y++ V+ L+ + L + +E+ +
Sbjct: 32 GQAQRPRSPLSPTRLSRLQEKVELQNLNDRLACYMDKVRALEAENNRLSRQVRVSQETVS 91
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E K+ ++E+ D R+ LD + ++ IE +RL++E DL+
Sbjct: 92 REVTSFKSMYDQELADARRLLDDIAKERAQAEIENKRLMEENDDLR 137
>gi|32880115|gb|AAP88888.1| lamin B2 [synthetic construct]
gi|60653745|gb|AAX29566.1| lamin B2 [synthetic construct]
Length = 601
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 69
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 70 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 108
>gi|23503078|sp|Q03252.3|LMNB2_HUMAN RecName: Full=Lamin-B2; Flags: Precursor
gi|16306859|gb|AAH06551.1| Lamin B2 [Homo sapiens]
gi|30583721|gb|AAP36109.1| lamin B1 [Homo sapiens]
gi|61361812|gb|AAX42107.1| lamin B2 [synthetic construct]
gi|190690577|gb|ACE87063.1| lamin B2 protein [synthetic construct]
gi|190691939|gb|ACE87744.1| lamin B2 protein [synthetic construct]
Length = 600
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 69
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 70 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 108
>gi|338724942|ref|XP_003365044.1| PREDICTED: prelamin-A/C [Equus caballus]
gi|338724944|ref|XP_003365045.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 572
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|344250962|gb|EGW07066.1| Lamin-A/C [Cricetulus griseus]
Length = 563
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|74219697|dbj|BAE29614.1| unnamed protein product [Mus musculus]
Length = 574
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|77404182|ref|NP_001029225.1| prelamin-A/C [Bos taurus]
gi|74354719|gb|AAI02843.1| Lamin A/C [Bos taurus]
gi|296489648|tpg|DAA31761.1| TPA: lamin A/C [Bos taurus]
Length = 572
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|161760667|ref|NP_001104572.1| prelamin-A/C isoform C [Mus musculus]
gi|1794160|dbj|BAA08570.1| lamin C [Mus musculus domesticus]
gi|74151854|dbj|BAE29714.1| unnamed protein product [Mus musculus]
gi|74211746|dbj|BAE29226.1| unnamed protein product [Mus musculus]
gi|74220230|dbj|BAE31294.1| unnamed protein product [Mus musculus]
gi|112378773|gb|ABI16252.1| lamin C [Mus musculus]
Length = 574
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|380817316|gb|AFE80532.1| lamin-B2 [Macaca mulatta]
Length = 601
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 69
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 70 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 108
>gi|395750153|ref|XP_002828467.2| PREDICTED: lamin-B2 [Pongo abelii]
Length = 550
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 32 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKEEVTTREV 89
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+KA E E+ D R+ LD + ++ L IE +L EL
Sbjct: 90 SGIKALYESELADARRVLDETARERARLQIEIGKLRAEL 128
>gi|149048131|gb|EDM00707.1| lamin A, isoform CRA_a [Rattus norvegicus]
Length = 574
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|52865|emb|CAA32372.1| unnamed protein product [Mus musculus]
Length = 574
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 AAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|74219492|dbj|BAE29519.1| unnamed protein product [Mus musculus]
Length = 574
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q + R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|194883054|ref|XP_001975619.1| GG22418 [Drosophila erecta]
gi|190658806|gb|EDV56019.1| GG22418 [Drosophila erecta]
Length = 614
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 18 STSSRVGATSPTSPTRTSRLQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 77
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 78 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 125
>gi|74220835|dbj|BAE31384.1| unnamed protein product [Mus musculus]
Length = 574
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q + R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|195486008|ref|XP_002091326.1| LamC [Drosophila yakuba]
gi|194177427|gb|EDW91038.1| LamC [Drosophila yakuba]
Length = 621
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT SR QEK EL++LNDRLA YI+ ++ L+N+ + L L +++ E +K
Sbjct: 34 SPTSPTRTSRLQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLK 93
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 94 AVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLK 132
>gi|363737573|ref|XP_413842.3| PREDICTED: lamin-L(III)-like [Gallus gallus]
Length = 583
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 38 PQSQPPRPGS--------PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEY 89
P S P GS PLSPT +SR QEK EL+ LNDRLA YIE V+ L+ DK+ L+
Sbjct: 4 PLSSTPASGSRSRGAAASPLSPTRLSRLQEKEELRQLNDRLAAYIERVRALEADKSVLQQ 63
Query: 90 SLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
L +E E ++ E E+ D R+ALD + ++ L +E
Sbjct: 64 RLVDLEAGSGRELGCLRLRYEAELADARRALDDIAIERATLQVE 107
>gi|77819840|gb|ABB04050.1| rhabdomyosarcoma antigen MU-RMS-40.12 [Homo sapiens]
Length = 487
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q + R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|21619981|gb|AAH33088.1| LMNA protein [Homo sapiens]
Length = 465
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q + R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|57014045|gb|AAW32539.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 480
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPG-----SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
Q + R G +PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L +
Sbjct: 6 QRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITE 65
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 66 SEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|321460154|gb|EFX71199.1| lamin-like protein [Daphnia pulex]
Length = 599
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
PLSPT ++R QEK EL+NLNDRLA YI+ V++L+++ L + + +++ + E V+
Sbjct: 26 PLSPTRLTRLQEKVELQNLNDRLANYIDRVRQLESENNRLTLQITTTQDTISREVTSVRG 85
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDL 144
+ EKE+ D R+ LD + K+ L +E R EL +L
Sbjct: 86 SYEKELSDTRQLLDETAKEKARLQLEAGRARAELGEL 122
>gi|395513280|ref|XP_003760855.1| PREDICTED: lamin-B2 [Sarcophilus harrisii]
Length = 607
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEF 102
PG+PLSP ISR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 16 PGTPLSPARISRLQEKEELRELNDRLAHYIDRVRALELENDRLLLQVS--EKEELPTREV 73
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+K E E+ D R+ LD + ++ L IE +L EL
Sbjct: 74 SGIKVLYESELADARRVLDETARERAKLQIEIGKLRAEL 112
>gi|162139823|ref|NP_001104727.1| prelamin-A/C [Sus scrofa]
gi|85701138|sp|Q3ZD69.1|LMNA_PIG RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
gi|66352014|gb|AAY44741.1| lamin A [Sus scrofa]
Length = 664
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+A E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 SAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|4886294|emb|CAB43342.1| Lamin [Astropecten brasiliensis]
Length = 565
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++R QEK EL +LNDRLA YI+ V+ L++D + L + ++EES T E +K EKE+
Sbjct: 37 VTRAQEKEELMDLNDRLAIYIDRVRSLESDNSRLMLQISTVEESQTQEITNIKYMYEKEL 96
Query: 114 EDIRKALDRESSSKSALAIE---KRRLLDEL 141
D+RK LD + K+ L IE R LDE+
Sbjct: 97 SDMRKLLDETAKDKARLQIEVGKNRAELDEI 127
>gi|195583410|ref|XP_002081515.1| GD25675 [Drosophila simulans]
gi|194193524|gb|EDX07100.1| GD25675 [Drosophila simulans]
Length = 621
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 25 STSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E +LK
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDELK 132
>gi|47213920|emb|CAF90743.1| unnamed protein product [Tetraodon nigroviridis]
Length = 543
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 62/92 (67%)
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAA 108
+SPT +R QEK++L++LNDRLA YI+ VQ+L+++++S+ L +ES + E KV+
Sbjct: 1 ISPTCQTRTQEKDDLRHLNDRLANYIQRVQELESERSSILLQLEEKDESKSREMSKVRRL 60
Query: 109 SEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E+E+ D+R +LD + K+ L I+ L +E
Sbjct: 61 YEEELADVRSSLDAVAGEKARLQIDCGNLCEE 92
>gi|195334380|ref|XP_002033861.1| GM20205 [Drosophila sechellia]
gi|194125831|gb|EDW47874.1| GM20205 [Drosophila sechellia]
Length = 621
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 40 SQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
S R G SP SPT SR+QEK EL++LNDRLA YI+ ++ L+N+ + L L +++
Sbjct: 25 STSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT 84
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E +KA EKE+ RK LD + K+ L I+ +RL +E +LK
Sbjct: 85 VNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDELK 132
>gi|66352015|gb|AAY44742.1| lamin C [Sus scrofa]
Length = 572
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 19 TPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+A E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 79 SAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 117
>gi|47213640|emb|CAF90344.1| unnamed protein product [Tetraodon nigroviridis]
Length = 633
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK +L++LNDRLA YI+ V+ L+++ L + EE + E +K
Sbjct: 9 TPLSPTRISRLQEKQQLRDLNDRLAVYIDKVRSLESENEVLHLQISEREEGQSREVSSLK 68
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
A E E+ D R++LD S ++ L IE
Sbjct: 69 ALYEAELADARQSLDDSSKERAWLQIE 95
>gi|224087202|ref|XP_002189120.1| PREDICTED: lamin-B2 [Taeniopygia guttata]
Length = 612
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEFK 103
G+PLSPT ISR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E
Sbjct: 24 GTPLSPTRISRLQEKEELRQLNDRLAVYIDRVRALELENDRLLLKIS--EKEEVTTREVS 81
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+K+ E E+ D R+ LD + ++ L IE +L EL
Sbjct: 82 GIKSLYESELADARRVLDETAKERARLQIEIGKLRAEL 119
>gi|195431451|ref|XP_002063755.1| GK15736 [Drosophila willistoni]
gi|194159840|gb|EDW74741.1| GK15736 [Drosophila willistoni]
Length = 619
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 30 REEPPQPQPQSQPPRPG---SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAS 86
R P + R G SP SP +R QEK +L++LNDRLA YI+ ++ L+N+ +
Sbjct: 14 RASTSTPVGGASTSRSGGATSPTSPARTTRLQEKEDLQHLNDRLACYIDRMRNLENENSR 73
Query: 87 LEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
L L+ +++ E +KA EKE+ RK LD + K+ L I+ +RL +E DLK
Sbjct: 74 LTQELHLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKQ 133
Query: 147 K 147
+
Sbjct: 134 R 134
>gi|113931400|ref|NP_001039148.1| lamin A/C [Xenopus (Silurana) tropicalis]
gi|89272508|emb|CAJ83897.1| lamin A/C [Xenopus (Silurana) tropicalis]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+++ A L + EE + E +K
Sbjct: 15 TPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLESENAGLRLRITESEEVVSREVSGIK 74
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 75 GAYEAELADARKTLDSVAKERARLQLELSKIREEHKELK 113
>gi|405967665|gb|EKC32801.1| Lamin Dm0 [Crassostrea gigas]
Length = 614
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%)
Query: 21 SSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKL 80
S SR+++ EE P + P R SP I+R++EK +L+NLNDRLA YI+ ++ L
Sbjct: 7 SKSRRSTRTEEESPSTSGVTSPGRRARAASPARITRQEEKTQLQNLNDRLAAYIDRIRNL 66
Query: 81 QNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
+ + L + S EE+ + E VK+ E E+ED R+ LD + K+ L IE +L
Sbjct: 67 ETENNRLLVQVRSTEETVSREVSSVKSMYENELEDARRVLDDTAKEKARLQIENGKL 123
>gi|348519580|ref|XP_003447308.1| PREDICTED: lamin-A-like [Oreochromis niloticus]
Length = 643
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P++ P +PLSP I+R QEK +L NLNDRLA YI+ V+ L+ + A L + E
Sbjct: 4 PKNTPRGANTPLSPNRITRLQEKEDLCNLNDRLAVYIDKVRSLEAENAGLRLRITESETE 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D R+ LD + ++ L +E +L ++ +LK
Sbjct: 64 VSRELTGLKAAYETELADARQTLDSVAKERARLQLELGKLREDHKELK 111
>gi|45384214|ref|NP_990618.1| lamin-A [Gallus gallus]
gi|125961|sp|P13648.1|LMNA_CHICK RecName: Full=Lamin-A; Flags: Precursor
gi|63556|emb|CAA34762.1| unnamed protein product [Gallus gallus]
Length = 657
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +K
Sbjct: 18 TPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIK 77
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
AA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 78 AAYEAELADARKTLDSVAKERARLQLELSKVREEHKELK 116
>gi|160774273|gb|AAI55034.1| Unknown (protein for IMAGE:7545824) [Xenopus (Silurana) tropicalis]
Length = 129
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
ATP+++ ++S S +R TS +PLSPT ISR QEK EL++LND
Sbjct: 4 ATPSRSGTSSMQSPARGTS-------------------TPLSPTRISRLQEKEELRHLND 44
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YI+ V+ L+ + L + EE T E +K E E+ D RK LD + ++
Sbjct: 45 RLAVYIDRVRSLELENDRLMVKISEKEEVTTREVSGIKNLYESELADARKVLDETARERA 104
Query: 129 ALAIEKRRL---LDEL 141
L IE + LDEL
Sbjct: 105 RLQIELGKFRSDLDEL 120
>gi|10803361|emb|CAC13106.1| nuclear lamin L1 alpha [Urochordate sp. AZ-2003]
Length = 469
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 62/98 (63%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P+ Q + P +PLSP++ SR+ EK ++ NLN+R+A Y+E V+ L+++ + L+ + S E
Sbjct: 4 PKVQQRREFPSTPLSPSVASRKDEKEQMVNLNNRMAVYVEKVRSLESENSRLQIRVTSFE 63
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
++ + E +KA E E+ + R+ LD S K+ L IE
Sbjct: 64 QTSSREVGNMKAMFEGELAEARRLLDELSKEKAQLQIE 101
>gi|27503473|gb|AAH42430.1| Lamin B2 [Mus musculus]
gi|30704673|gb|AAH51985.1| Lamin B2 [Mus musculus]
Length = 615
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 40 SQPPR--PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PP P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L S E
Sbjct: 22 SLPPHAGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRIS--EKE 79
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 80 EVTTREVSGIKTLYESELADARRVLDETARERARLQIEIGKVQAEL 125
>gi|10803429|emb|CAC13135.1| lamin [Styela clava]
Length = 487
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 30 REEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEY 89
R++ + + Q P +PLSP++ SRR+EK+++ NLN+RLA YIE ++ L+ + L+
Sbjct: 5 RQQSRRKEQSRQQGSPSTPLSPSVTSRREEKDQMINLNNRLAAYIEKIRSLETENRRLQI 64
Query: 90 SLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLD 139
+ S EE+ + E +K E EI++ R+ LD + ++ L +E L D
Sbjct: 65 QVTSHEETSSREVSNIKEMYETEIKEARRLLDEVAKERAQLQLEVASLQD 114
>gi|10803363|emb|CAC13107.1| nuclear lamin L1 beta [Urochordate sp. AZ-2003]
Length = 459
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 62/98 (63%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P+ Q + P +PLSP++ SR+ EK ++ NLN+R+A Y+E V+ L+++ + L+ + S E
Sbjct: 4 PKVQQRREFPSTPLSPSVASRKDEKEQMVNLNNRMAVYVEKVRSLESENSRLQIRVTSFE 63
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
++ + E +KA E E+ + R+ LD S K+ L IE
Sbjct: 64 QTSSREVGNMKAMFEGELAEARRLLDELSKEKAQLQIE 101
>gi|228591|prf||1807162A lamin B2
Length = 596
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 40 SQPPR--PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PP P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L S E
Sbjct: 3 SLPPHAGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRIS--EKE 60
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 61 EVTTREVSGIKTLYESELADARRVLDETARERARLQIEIGKVQAEL 106
>gi|113195686|ref|NP_034852.2| lamin-B2 [Mus musculus]
gi|85700429|sp|P21619.2|LMNB2_MOUSE RecName: Full=Lamin-B2; Flags: Precursor
gi|148699526|gb|EDL31473.1| lamin B2 [Mus musculus]
Length = 596
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 40 SQPPR--PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PP P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L S E
Sbjct: 3 SLPPHAGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRIS--EKE 60
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 61 EVTTREVSGIKTLYESELADARRVLDETARERARLQIEIGKVQAEL 106
>gi|52867|emb|CAA38032.1| lamin B2 [Mus musculus]
Length = 592
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 40 SQPPR--PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
S PP P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L S E
Sbjct: 3 SLPPHAGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRIS--EKE 60
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
E T E +K E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 61 EVTTREVSGIKTLYESELADARRVLDETARERARLQIEIGKVQAEL 106
>gi|134085409|ref|NP_001076823.1| lamin B3 [Xenopus (Silurana) tropicalis]
gi|134025811|gb|AAI35751.1| lmnb3 protein [Xenopus (Silurana) tropicalis]
Length = 582
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
S P PGSP T ISR QEK +L++LNDRLA YIE V+ L+ DK+ L+ L EE +
Sbjct: 14 SAAPSPGSP---TRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEKEEVTS 70
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E ++ E E+ D RK LD+ ++ ++ L +E
Sbjct: 71 REVTNLRLLYETELADARKLLDQTANERARLQVE 104
>gi|347944102|gb|AEP27819.1| Hau-lamin2 [Helobdella sp. Austin]
Length = 613
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 39 QSQPPRPGS--PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
QS PGS P SPT++SR QEKNEL LNDRLA YIE V+ L+ + L + S +E
Sbjct: 31 QSFRSTPGSNRPPSPTVLSRLQEKNELAGLNDRLANYIERVRTLEVENGRLTRIITSKDE 90
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E K+K E+E+ RK LD S K L +E
Sbjct: 91 CVVKETSKIKGMFEEELASARKLLDDVSKEKVKLQVE 127
>gi|89273773|emb|CAJ81859.1| lamin A/C [Xenopus (Silurana) tropicalis]
Length = 412
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
S P PGSP T ISR QEK +L++LNDRLA YIE V+ L+ DK+ L+ L EE +
Sbjct: 14 SAAPSPGSP---TRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEKEEVTS 70
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E ++ E E+ D RK LD+ ++ ++ L +E
Sbjct: 71 REVTNLRLLYETELADARKLLDQTANERARLQVE 104
>gi|195473854|ref|XP_002089207.1| GE25472 [Drosophila yakuba]
gi|194175308|gb|EDW88919.1| GE25472 [Drosophila yakuba]
Length = 624
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPR----PGSPLSPTIISR 56
MS +S+R T P GS+S T PQ Q QPP SPLSPT SR
Sbjct: 1 MSSKSRRAGTATPQP----GSTS--TPRAPSAGPQ-QHHQQPPTHSQTASSPLSPTRHSR 53
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
EK EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ +
Sbjct: 54 VAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLET 113
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R+ LD + ++ I+ +RL +E +LK +
Sbjct: 114 RRLLDDTARDRARAEIDIKRLWEENEELKGR 144
>gi|335282347|ref|XP_003354039.1| PREDICTED: lamin-B2 [Sus scrofa]
Length = 604
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIE 95
P + P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S E
Sbjct: 5 PPGRAGGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EKE 62
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
E T E +K E E+ D R+ LD + ++ L IE +L
Sbjct: 63 EVTTREVSGIKTLYESELADARRVLDETARDRARLQIEIGKL 104
>gi|312372727|gb|EFR20623.1| hypothetical protein AND_19779 [Anopheles darlingi]
Length = 575
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ LSP+ SR +EKN L NLNDRLA YIE V+ L+ + + L + L +++++ E +K
Sbjct: 52 TALSPSRRSRLREKNNLMNLNDRLACYIERVRYLEQENSRLLHELSTLQDTANREVSGLK 111
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
A E E+ D RK LD + K+ L IE +R +E
Sbjct: 112 AIYEHELTDARKLLDETARDKARLEIEAKRYCEE 145
>gi|194856738|ref|XP_001968816.1| GG25079 [Drosophila erecta]
gi|190660683|gb|EDV57875.1| GG25079 [Drosophila erecta]
Length = 624
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEV-REEPPQPQPQSQPPRPGSPLSPTIISRRQE 59
MS +S+R T P + S+ R S ++ QP SQP SPLSPT SR E
Sbjct: 1 MSSKSRRAGTATPQPGGT--STPRAPSAGPQQHHQQPPTLSQPA--SSPLSPTRHSRVVE 56
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKA 119
K EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ + R+
Sbjct: 57 KVELQNLNDRLANYIDRVRNLETENSRLSIEVQTTRDTVTRETTNIKNIFEAELLETRRL 116
Query: 120 LDRESSSKSALAIEKRRLLDELLDLKNK 147
LD + ++ I+ +RL +E +LK +
Sbjct: 117 LDDTARDRARAEIDIKRLWEENEELKGR 144
>gi|16660147|gb|AAL27546.1|AF397015_1 nuclear lamin LIII [Danio rerio]
Length = 584
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+SPT ++R QEK +L+ LNDRLA YIE V++L+ DK+S++ L EES E V+
Sbjct: 28 CTVSPTRLTRLQEKEDLRQLNDRLANYIERVRQLEADKSSMQILLEEKEESSLREVGNVR 87
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRL 137
E E+ D RK+LD ++ ++ L IE +L
Sbjct: 88 RLYESELADARKSLDATANERARLQIEFSQL 118
>gi|301621493|ref|XP_002940085.1| PREDICTED: lamin-L(II) [Xenopus (Silurana) tropicalis]
Length = 623
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
ATP+++ ++S S +R TS +PLSPT ISR QEK EL++LND
Sbjct: 4 ATPSRSGTSSMQSPARGTS-------------------TPLSPTRISRLQEKEELRHLND 44
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YI+ V+ L+ + L + EE T E +K E E+ D RK LD + ++
Sbjct: 45 RLAVYIDRVRSLELENDRLMVKISEKEEVTTREVSGIKNLYESELADARKVLDETARERA 104
Query: 129 ALAIEKRRL---LDEL 141
L IE + LDEL
Sbjct: 105 RLQIELGKFRSDLDEL 120
>gi|42476244|ref|NP_694505.2| lamin L3 [Danio rerio]
gi|38197594|gb|AAH61708.1| Lamin L3 [Danio rerio]
gi|40807153|gb|AAH65358.1| Lamin L3 [Danio rerio]
Length = 584
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+SPT ++R QEK +L+ LNDRLA YIE V++L+ DK+S++ L EES E V+
Sbjct: 28 CTVSPTRLTRLQEKEDLRQLNDRLANYIERVRQLEADKSSMQILLEEKEESSLREVGNVR 87
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRL 137
E E+ D RK+LD ++ ++ L IE +L
Sbjct: 88 RLYESELADARKSLDATANERARLQIEFSQL 118
>gi|50417542|gb|AAH77526.1| LOC397912 protein [Xenopus laevis]
Length = 623
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 41 QPPRPGS--PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH 98
Q P G+ PLSPT ISR QEK EL++LNDRLA YI+ V+ L+ + L + EE
Sbjct: 15 QSPARGTSTPLSPTRISRLQEKEELRHLNDRLAVYIDRVRALELENDRLMVKISEKEEVT 74
Query: 99 TTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL---LDEL 141
T E +K E E+ D RK LD + ++ L IE + LDEL
Sbjct: 75 TREVSGIKNLYESELADARKVLDETARERARLQIELGKFRSDLDEL 120
>gi|40254675|ref|NP_694504.2| lamin-B1 [Danio rerio]
gi|27881874|gb|AAH44402.1| Lamin B1 [Danio rerio]
gi|182890916|gb|AAI65769.1| Lmnb1 protein [Danio rerio]
Length = 588
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 23/126 (18%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLN 67
TPA S SRG+SS +PLSP ISR QEK EL+ LN
Sbjct: 5 ACTPAGQQSLSRGTSS-----------------------TPLSPARISRLQEKEELQQLN 41
Query: 68 DRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSK 127
DRLA YI+ V+ L+++ + L+ + E+ E ++ E E+ D RKALD + +
Sbjct: 42 DRLAAYIDTVRSLESENSVLQIQIREREDVRNRELTGLRTLYETELADARKALDDTARER 101
Query: 128 SALAIE 133
+ L IE
Sbjct: 102 ARLQIE 107
>gi|156119485|ref|NP_001095239.1| lamin-L(II) [Xenopus laevis]
gi|125958|sp|P21910.1|LAML2_XENLA RecName: Full=Lamin-L(II); Flags: Precursor
gi|64884|emb|CAA38033.1| lamin LII [Xenopus laevis]
Length = 623
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 41 QPPRPGS--PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH 98
Q P G+ PLSPT ISR QEK EL++LNDRLA YI+ V+ L+ + L + EE
Sbjct: 15 QSPARGTSTPLSPTRISRLQEKEELRHLNDRLAVYIDRVRALELENDRLMVKISEKEEVT 74
Query: 99 TTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL---LDEL 141
T E +K E E+ D RK LD + ++ L IE + LDEL
Sbjct: 75 TREVSGIKNLYESELADARKVLDETARERARLQIELGKFRSDLDEL 120
>gi|45384202|ref|NP_990616.1| lamin-B2 [Gallus gallus]
gi|125956|sp|P14732.1|LMNB2_CHICK RecName: Full=Lamin-B2; Flags: Precursor
gi|63560|emb|CAA34763.1| unnamed protein product [Gallus gallus]
Length = 600
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
G+PLSPT ISR QEK EL+ LNDRLA YI+ V+ L+ + L + EE T E +
Sbjct: 12 GTPLSPTRISRLQEKEELRQLNDRLAVYIDRVRALELENDRLLVKISEKEEVTTREVSGI 71
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
K E E+ D R+ LD + ++ L IE +L EL
Sbjct: 72 KNLYESELADARRVLDETAKERARLQIEIGKLRAEL 107
>gi|46329565|gb|AAH68414.1| Lmnb1 protein, partial [Danio rerio]
Length = 587
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 23/126 (18%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLN 67
TPA S SRG+SS +PLSP ISR QEK EL+ LN
Sbjct: 4 ACTPAGQQSLSRGTSS-----------------------TPLSPARISRLQEKEELQQLN 40
Query: 68 DRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSK 127
DRLA YI+ V+ L+++ + L+ + E+ E ++ E E+ D RKALD + +
Sbjct: 41 DRLAAYIDTVRSLESENSVLQIQIREREDVRNRELTGLRTLYETELADARKALDDTARER 100
Query: 128 SALAIE 133
+ L IE
Sbjct: 101 ARLQIE 106
>gi|47213126|emb|CAF96621.1| unnamed protein product [Tetraodon nigroviridis]
Length = 585
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P +S P +PLSPT I+R QEK++L++LNDRLA YI+ V+ L+ + L + E
Sbjct: 6 PSRESVRPAASTPLSPTRITRLQEKHDLQHLNDRLAVYIDRVRALELENDRLMVKVSEKE 65
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E T E +KA E E+ D R+ LD + ++ L I+
Sbjct: 66 EVTTREVSGLKALYEAELADARRVLDDTAKDRARLQID 103
>gi|410927468|ref|XP_003977167.1| PREDICTED: lamin-A-like [Takifugu rubripes]
Length = 629
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
SQ +PLSP I+R QEK +L NLNDRLA YI+ V+ L+ + ASL + E +
Sbjct: 5 SQKRGAATPLSPARITRLQEKEDLCNLNDRLAVYIDKVRSLEIENASLRLRITESESTVC 64
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ +KA E E+ D R LD+ + ++ L +E +L +E +LK
Sbjct: 65 RDLSGIKATYEAELADARTTLDQVAKDRARLQLELSKLKEEHKELK 110
>gi|449471596|ref|XP_002197189.2| PREDICTED: lamin-L(III)-like [Taeniopygia guttata]
Length = 660
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
PP P S+P SPLSP +SR QEK +L+ LNDRLA YIE V+ L+ DK++L+ L
Sbjct: 84 PPTPAGGSRPAE--SPLSPARLSRLQEKEQLRQLNDRLAAYIERVRALEADKSALQQRLS 141
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
+ E ++ E E+ D R+ LD + ++ L +E
Sbjct: 142 EQQAGSDRELGCLRLRYEAELADARRTLDDIAIERATLQVE 182
>gi|348527612|ref|XP_003451313.1| PREDICTED: lamin-A-like [Oreochromis niloticus]
Length = 645
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
SQ S +SP I+R QEK EL NLNDRLA YI+ V+ L+++ A L + E S T
Sbjct: 5 SQKRTSRSAVSPARITRLQEKEELCNLNDRLAVYIDKVRSLESENAGLRLRISESESSVT 64
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ +K A E E+ D RK LD+ + ++ L +E ++ +E +LK
Sbjct: 65 RDLSGIKTAYETELADARKTLDQVAKERARLQLELSKIKEEHKELK 110
>gi|115530372|emb|CAL49390.1| lamin B2 [Xenopus (Silurana) tropicalis]
Length = 344
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
ATP+++ ++S S +R TS +PLSPT ISR QEK EL++LND
Sbjct: 4 ATPSRSGTSSMQSPARGTS-------------------TPLSPTRISRLQEKEELRHLND 44
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YI+ V+ L+ + L + EE T E +K E E+ D RK LD + ++
Sbjct: 45 RLAVYIDRVRSLELENDRLMVKISEKEEVTTREVSGIKNLYESELADARKVLDETARERA 104
Query: 129 ALAIEKRRL---LDEL 141
L IE + LDEL
Sbjct: 105 RLQIELGKFRSDLDEL 120
>gi|147901703|ref|NP_001080947.1| lamin B2 [Xenopus laevis]
gi|49115181|gb|AAH73219.1| Lmnb2-A-prov protein [Xenopus laevis]
Length = 624
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 41 QPPRPG---SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
Q P G +PLSPT ISR QEK EL++LNDRLA YI+ V+ L+ + L + EE
Sbjct: 15 QSPARGISSTPLSPTRISRLQEKEELRHLNDRLAVYIDRVRALELENDRLMVKISEKEEV 74
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL---LDEL 141
T E +K E E+ D RK LD + ++ L IE + LDEL
Sbjct: 75 TTREVSGIKNLYESELADARKVLDETARERARLQIELGKFRSDLDEL 121
>gi|410920742|ref|XP_003973842.1| PREDICTED: lamin-B2-like [Takifugu rubripes]
Length = 632
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 36 PQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE 95
P ++ P +PLSPT I+R QEK++L++LNDRLA YI+ V+ L+ + L + E
Sbjct: 6 PSRETVRPAASTPLSPTRITRLQEKHDLQHLNDRLAVYIDRVRSLELENDRLMVKVSEKE 65
Query: 96 ESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E T E +KA E E+ D R+ LD + ++ L I+
Sbjct: 66 EVTTREVSGLKALYEAELADARRVLDETAKDRAKLQID 103
>gi|157130102|ref|XP_001655561.1| lamin [Aedes aegypti]
gi|108884444|gb|EAT48669.1| AAEL000335-PA [Aedes aegypti]
Length = 560
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ LSP+ SR EKN L NLNDRLA YIE V+ L+ + + L L S +E+ E +K
Sbjct: 37 TALSPSRRSRLHEKNSLMNLNDRLACYIERVRFLEQENSKLSLELSSCQETALREVANLK 96
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
A E E+ D RK LD + K+ + I+ +R +E
Sbjct: 97 AIYENELADARKLLDETARDKAKVEIDAKRYWEE 130
>gi|427785555|gb|JAA58229.1| Putative lamin [Rhipicephalus pulchellus]
Length = 606
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 60/94 (63%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
R SPLS + +R QEKNEL NLNDRLA YI+ V++L+ + + L + + +E+ T E
Sbjct: 51 RSRSPLSQSRFTRIQEKNELANLNDRLAAYIDRVRELETENSRLTKQIETSQETRTREVT 110
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
VK E+E+ + R+A+D ++ ++ L +E ++
Sbjct: 111 SVKNLYERELAEARRAVDDTANERAKLQLEAKKW 144
>gi|427785553|gb|JAA58228.1| Putative lamin [Rhipicephalus pulchellus]
Length = 606
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 60/94 (63%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
R SPLS + +R QEKNEL NLNDRLA YI+ V++L+ + + L + + +E+ T E
Sbjct: 51 RSRSPLSQSRFTRIQEKNELANLNDRLAAYIDRVRELETENSRLTKQIETSQETRTREVT 110
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
VK E+E+ + R+A+D ++ ++ L +E ++
Sbjct: 111 SVKNLYERELAEARRAVDDTANERAKLQLEAKKW 144
>gi|240977914|ref|XP_002402839.1| lamin, putative [Ixodes scapularis]
gi|215491235|gb|EEC00876.1| lamin, putative [Ixodes scapularis]
Length = 579
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 60/94 (63%)
Query: 44 RPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
R SPLS + +SR QEKNEL +LNDRLA YI+ V+ L+++ + L + + +E+ T E
Sbjct: 53 RSHSPLSASRVSRIQEKNELAHLNDRLAAYIDRVRHLESENSKLTKQIETSQETRTREVA 112
Query: 104 KVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
VK ++E+ D R+ +D ++ K+ L ++ ++
Sbjct: 113 SVKNLYDRELADARRTVDLTANEKAKLQLDAKKW 146
>gi|17136290|ref|NP_476616.1| lamin, isoform A [Drosophila melanogaster]
gi|386769141|ref|NP_001245892.1| lamin, isoform B [Drosophila melanogaster]
gi|386769143|ref|NP_001245893.1| lamin, isoform C [Drosophila melanogaster]
gi|78099783|sp|P08928.4|LAM0_DROME RecName: Full=Lamin Dm0; Flags: Precursor
gi|7296991|gb|AAF52262.1| lamin, isoform A [Drosophila melanogaster]
gi|25012297|gb|AAN71261.1| LD38055p [Drosophila melanogaster]
gi|383291341|gb|AFH03566.1| lamin, isoform B [Drosophila melanogaster]
gi|383291342|gb|AFH03567.1| lamin, isoform C [Drosophila melanogaster]
Length = 622
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS +S+R T TP S+ R S P P P + SPLSPT SR EK
Sbjct: 1 MSSKSRRAGTA--TPQPGNTSTPRPPSA---GPQPPPPSTHSQTASSPLSPTRHSRVAEK 55
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ + R+ L
Sbjct: 56 VELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLL 115
Query: 121 DRESSSKSALAIEKRRLLDELLDLKNK 147
D + ++ I+ +RL +E +LKNK
Sbjct: 116 DDTARDRARAEIDIKRLWEENEELKNK 142
>gi|432882966|ref|XP_004074167.1| PREDICTED: lamin-A-like [Oryzias latipes]
Length = 640
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
PLSP I+R QEK +L NLNDRLA YI+ V+ L+ + A L + E T E +K
Sbjct: 15 PLSPNRITRLQEKEDLSNLNDRLAVYIDKVRSLEAENACLRVRITESETEVTRELTGLKN 74
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
A E E+ D RK LD + ++ L +E +L ++ +LK
Sbjct: 75 AYEAELADARKTLDSVAKERARLQLELGKLREDHKELK 112
>gi|6065833|emb|CAB58234.1| lamin B1 protein [Danio rerio]
Length = 588
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLN 67
TP S SRG+SS +PLSP ISR QEK EL+ LN
Sbjct: 5 ACTPVGQQSLSRGTSS-----------------------TPLSPARISRLQEKEELQQLN 41
Query: 68 DRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSK 127
DRLA YI+ V+ L+++ + L+ + E+ E ++ E E+ D RKALD + +
Sbjct: 42 DRLAAYIDTVRSLESENSVLQIQIREREDVRNRELTGLRTLYETELADARKALDDTARER 101
Query: 128 SALAIE 133
+ L IE
Sbjct: 102 ARLQIE 107
>gi|195443080|ref|XP_002069267.1| GK21105 [Drosophila willistoni]
gi|194165352|gb|EDW80253.1| GK21105 [Drosophila willistoni]
Length = 623
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRP---------GSPLSP 51
MS +S+R T P GS+S P P S P P SPLSP
Sbjct: 1 MSTKSRRAGTATPQP----GSTS-----------TPLPPSGGPAPQQQQQQQQASSPLSP 45
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
T SR EK EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E
Sbjct: 46 TRHSRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEA 105
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E+ + R+ LD + ++ + I+ +R+ +E +LK
Sbjct: 106 ELLETRRLLDETARERAKIEIDLKRMWEENDNLK 139
>gi|323715518|gb|ADY04829.1| lamin-2xHA tag fusion protein [Gal4/UAS cloning vector pKC26-FB2.0]
Length = 644
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS +S+R T TP S+ R S P P P + SPLSPT SR EK
Sbjct: 1 MSSKSRRAGTA--TPQPGNTSTPRPPSA---GPQPPPPSTHSQTASSPLSPTRHSRVAEK 55
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ + R+ L
Sbjct: 56 VELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLL 115
Query: 121 DRESSSKSALAIEKRRLLDELLDLKNK 147
D + ++ I+ +RL +E +LKNK
Sbjct: 116 DDTARDRARAEIDIKRLWEENEELKNK 142
>gi|327263290|ref|XP_003216453.1| PREDICTED: lamin-B1-like [Anolis carolinensis]
Length = 588
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK EL+ LNDRLA YI+ V+ L+ + ++L + EE E +K
Sbjct: 19 TPLSPTRISRLQEKEELRELNDRLAVYIDKVRSLELENSALHLQVTEREEVRGRELTGLK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
E E+ D R+ALD + ++ L IE
Sbjct: 79 TLYEAELADARRALDDTARERAKLQIE 105
>gi|8184|emb|CAA34351.1| lamin [Drosophila melanogaster]
Length = 621
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 36 PQP-QSQPPRPG----------------SPLSPTIISRRQEKNELKNLNDRLAQYIELVQ 78
PQP + PRP SPLSPT SR EK EL+NLNDRLA YI+ V+
Sbjct: 13 PQPGNTSTPRPAIGSAAAAAVHSLADASSPLSPTRHSRVAEKVELQNLNDRLATYIDRVR 72
Query: 79 KLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLL 138
L+ + + L + + ++ T E +K E E+ + R+ LD + ++ I+ +RL
Sbjct: 73 NLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLW 132
Query: 139 DELLDLKNK 147
+E +LKNK
Sbjct: 133 EENEELKNK 141
>gi|23308641|ref|NP_694503.1| prelamin-A/C [Danio rerio]
gi|16660150|gb|AAL27547.1|AF397016_1 nuclear lamin A [Danio rerio]
Length = 659
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 39 QSQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
Q + R G + LSPT ISR QEK +L NLNDRLA YI+ V+ L+ + A L + E
Sbjct: 6 QKRSSRGGVTNVLSPTRISRLQEKEDLSNLNDRLAVYIDKVRSLEVENAGLRMRITESET 65
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D RK LD + ++ L +E ++ ++ +LK
Sbjct: 66 EISRELSGMKAAYEAELADARKTLDSVAKERARLQLELSKVREDYKELK 114
>gi|190337683|gb|AAI63799.1| Lamin A [Danio rerio]
gi|190337691|gb|AAI63807.1| Lamin A [Danio rerio]
Length = 659
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 39 QSQPPRPG--SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
Q + R G + LSPT ISR QEK +L NLNDRLA YI+ V+ L+ + A L + E
Sbjct: 6 QKRSSRGGVTNVLSPTRISRLQEKEDLSNLNDRLAVYIDKVRSLEVENAGLRMRITESET 65
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D RK LD + ++ L +E ++ ++ +LK
Sbjct: 66 EISRELSGMKAAYEAELADARKTLDSVAKERARLQLELSKVREDYKELK 114
>gi|432853400|ref|XP_004067688.1| PREDICTED: lamin-B2-like [Oryzias latipes]
Length = 579
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK +L+ LNDRLA YIE V+ L+ + L + EE T E +K
Sbjct: 19 TPLSPTRISRLQEKQDLQQLNDRLAVYIERVRALELENDRLMVKVSEKEEVTTREVTGLK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
A E E+ D+R+ LD + ++ L I+
Sbjct: 79 ALYEAELADLRRVLDETAKERARLQID 105
>gi|156119433|ref|NP_001095210.1| lamin-A [Xenopus laevis]
gi|125963|sp|P11048.1|LMNA_XENLA RecName: Full=Lamin-A; Flags: Precursor
gi|64878|emb|CAA29652.1| unnamed protein product [Xenopus laevis]
gi|255254|gb|AAB23219.1| lamin A, XlA [Xenopus laevis, Peptide, 665 aa]
Length = 665
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + E+ + E +K
Sbjct: 15 TPLSPTRITRLQEKEDLQGLNDRLAVYIDKVRSLELENARLRLRITESEDVISREVTGIK 74
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+A E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 75 SAYETELADARKTLDSVAKERARLQLELSKIREEHKELK 113
>gi|76152538|gb|AAX24227.2| SJCHGC06198 protein [Schistosoma japonicum]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 1 MSGRS-KRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQE 59
MS R+ K+ A ++ AS S SR ++ R P+ R SP ISR +E
Sbjct: 18 MSARARKQKAMESERSEASPTSFSRSSTIERSHTSSGSPRKSFSRSERSSSPLTISRSEE 77
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKA 119
K+EL +LNDRLA YI+ V+KL+ DK L + ++ E ++ ++ + E EI +R
Sbjct: 78 KDELAHLNDRLAGYIDYVRKLELDKQKLTKRIQTVTEERMSKVEEARKTYEDEITALRNL 137
Query: 120 LDRESSSKSALAIEKRRLLDELLDLKNK 147
+D + KS ++ ++ DEL D+K K
Sbjct: 138 VDDLAKQKSKAELDSKQTSDELNDMKTK 165
>gi|366392938|ref|NP_571077.2| lamin-B2 [Danio rerio]
gi|190336637|gb|AAI62105.1| Lamin B2 [Danio rerio]
Length = 583
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSP ISR QEK EL+ LNDRLA YI+ V+ L+ + L++ + EE T E +K
Sbjct: 14 TPLSPARISRLQEKEELRALNDRLAVYIDRVRALELENDRLQFKVSEKEEVTTREVSGIK 73
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 74 SLYEAELADARRVLDETARERAKLQIELGKVNSEL 108
>gi|4678403|emb|CAB41015.1| lamin B2 [Danio rerio]
Length = 583
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSP ISR QEK EL+ LNDRLA YI+ V+ L+ + L++ + EE T E +K
Sbjct: 14 TPLSPARISRLQEKEELRALNDRLAVYIDRVRALELENDRLQFKVSEKEEVTTREVSGIK 73
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ E E+ D R+ LD + ++ L IE ++ EL
Sbjct: 74 SLYEAELADARRVLDETARERAKLQIELGKVNSEL 108
>gi|195034692|ref|XP_001988956.1| GH10295 [Drosophila grimshawi]
gi|193904956|gb|EDW03823.1| GH10295 [Drosophila grimshawi]
Length = 625
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
SPLSPT SR EK EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +
Sbjct: 43 NSPLSPTRHSRLVEKVELQNLNDRLACYIDRVRNLETENSRLSIEVQTTRDTVTRETTNI 102
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
K E E+ D R+ LD + ++ L I+ +RL +E
Sbjct: 103 KNIYENELLDARRMLDELARERARLEIDTKRLWEE 137
>gi|47550983|ref|NP_999665.1| nuclear intermediate filament protein [Strongylocentrotus
purpuratus]
gi|11386011|gb|AAG35069.1|AF320295_1 B-type nuclear lamin [Strongylocentrotus purpuratus]
gi|998562|gb|AAB34118.1| B-type nuclear lamin [Strongylocentrotus purpuratus, Peptide, 565
aa]
Length = 565
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASE 110
P ISR +EK EL LNDRLA YI+ V+ L+ + L + S EE+ T + + +K E
Sbjct: 39 PAKISRHEEKEELIGLNDRLATYIDRVRHLELENGRLLVQITSFEETQTRDIEGIKVLYE 98
Query: 111 KEIEDIRKALDRESSSKSALAIE 133
KE+ D RK LD + K+ L IE
Sbjct: 99 KELADARKLLDETAGEKAKLQIE 121
>gi|158297175|ref|XP_317447.4| AGAP008015-PA [Anopheles gambiae str. PEST]
gi|157015068|gb|EAA12429.5| AGAP008015-PA [Anopheles gambiae str. PEST]
Length = 571
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAA 108
LSP+ SR EKN L NLNDRLA YIE V+ L+ + + L L + +E+ E +K+
Sbjct: 47 LSPSRRSRLHEKNSLMNLNDRLACYIERVRYLEQENSRLSLELTTFQETAAREVSGLKSI 106
Query: 109 SEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E E+ D RK LD + K+ + I+ +R +E L+ K
Sbjct: 107 YEHELADARKLLDETARDKAKVEIDAKRYWEENEQLRTK 145
>gi|260783332|ref|XP_002586730.1| hypothetical protein BRAFLDRAFT_121709 [Branchiostoma floridae]
gi|229271853|gb|EEN42741.1| hypothetical protein BRAFLDRAFT_121709 [Branchiostoma floridae]
Length = 593
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ LSPT ++R QEK EL+ LNDRLAQYI+ V+ L+ + + L + S EE E +K
Sbjct: 37 TQLSPTRLTRMQEKQELQWLNDRLAQYIDRVRYLEAENSRLMVQVTSSEEITQREVTNIK 96
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
+ E+E+ D RK LD + K+ + IE
Sbjct: 97 SMFEQELTDARKLLDDTAKEKARVQIE 123
>gi|449671174|ref|XP_002166189.2| PREDICTED: lamin Dm0-like [Hydra magnipapillata]
Length = 694
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P + PR G SP I +R QEK EL LNDRLA YI+ ++ L+ L + + +ES
Sbjct: 5 PDVRSPRYGYQ-SPNIRTRVQEKEELSGLNDRLATYIDRMRYLEQQNTRLSAEITTSKES 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
T E VKA E E+ + R+ LD + K+ L +E +L + DL++K
Sbjct: 64 VTREVGNVKAMFEAELGEARRLLDETAKDKALLQLENNKLTSLVEDLRHK 113
>gi|395510574|ref|XP_003759549.1| PREDICTED: lamin-B1 [Sarcophilus harrisii]
Length = 586
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
P +PLSPT +SR +EK EL+ LNDRLA YI+ V+ L+ +K+ L+ + H E
Sbjct: 18 PSTPLSPTRLSRLREKEELRELNDRLAVYIDKVRSLELEKSVLQLQV----TEHDRELTG 73
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIE 133
+K E E+ D R+ALD + ++ L IE
Sbjct: 74 LKTLYETELADARRALDDTACERAKLQIE 102
>gi|441286|emb|CAA30259.1| unnamed protein product [Drosophila melanogaster]
Length = 622
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS +S+R T TP S+ R S P P P + SPLSPT SR EK
Sbjct: 1 MSSKSRRAGTA--TPQPGNTSTPRPPSA---GPQPPPPSTHSQTASSPLSPTRHSRVAEK 55
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ + R+ L
Sbjct: 56 VELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLL 115
Query: 121 DRESSSKSALAIEKRRLLDELLDLKNK 147
D + ++ I+ +RL + +LKNK
Sbjct: 116 DDTARDRARAEIDIKRLWERNEELKNK 142
>gi|45384220|ref|NP_990617.1| lamin-B1 [Gallus gallus]
gi|125952|sp|P14731.1|LMNB1_CHICK RecName: Full=Lamin-B1; Flags: Precursor
gi|63558|emb|CAA34761.1| unnamed protein product [Gallus gallus]
Length = 584
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P PQP+ + LSPT ISR QEK EL+ LNDRLA YI+ V+ L+ + ++L+ +
Sbjct: 7 PLSPQPRGAAA--SAALSPTRISRLQEKEELRQLNDRLAVYIDKVRSLETENSALQRRVS 64
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRL 137
E+ E +K E E+ D RK LD + ++ L IE +L
Sbjct: 65 EREQVCGREISGLKELFETELADARKTLDDTARERAKLQIELGKL 109
>gi|195025063|ref|XP_001985993.1| GH21120 [Drosophila grimshawi]
gi|193901993|gb|EDW00860.1| GH21120 [Drosophila grimshawi]
Length = 623
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
QEK EL++LNDRLA YI+ ++ L+N+ L L+ +E+ E VKA E+E+ R
Sbjct: 46 QEKEELQHLNDRLACYIDRMRHLENENGRLTQELHLAQETVNRETSNVKAVYERELAAAR 105
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K LD + K+ L I+ +RL +E DLK +
Sbjct: 106 KLLDETAKDKAKLEIDIKRLWEENDDLKQR 135
>gi|195123283|ref|XP_002006137.1| GI18724 [Drosophila mojavensis]
gi|193911205|gb|EDW10072.1| GI18724 [Drosophila mojavensis]
Length = 622
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
QEK EL++LNDRLA YI+ ++ L+N+ A L ++ +E+ E +KA EKE+ R
Sbjct: 46 QEKEELQHLNDRLACYIDRMRHLENENARLTQEVHMAQETVNRETSNLKAVYEKELAAAR 105
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K LD + K+ L I+ +RL +E DLK +
Sbjct: 106 KLLDETAKEKAKLEIDIKRLWEENDDLKQR 135
>gi|45361241|ref|NP_989198.1| lamin B1 [Xenopus (Silurana) tropicalis]
gi|38648995|gb|AAH63368.1| lamin B1 [Xenopus (Silurana) tropicalis]
Length = 584
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ + +PLSPT ISR QEK +L+ LNDRLA YI+ V+ L+++ + L +
Sbjct: 6 PSGPRSSGRRSSMNTPLSPTRISRLQEKVDLQELNDRLAVYIDKVRSLESENSLLHVQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +K E E+ D R++LD + ++ L +E ++ E DL+
Sbjct: 66 EREEVRSREVSGIKELYETELADARRSLDDTARERARLQLELSKISVEHEDLR 118
>gi|89272234|emb|CAJ83381.1| lamin B1 [Xenopus (Silurana) tropicalis]
Length = 584
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%)
Query: 33 PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P+ + +PLSPT ISR QEK +L+ LNDRLA YI+ V+ L+++ + L +
Sbjct: 6 PSGPRSSGRRSSMNTPLSPTRISRLQEKVDLQELNDRLAVYIDKVRSLESENSLLHVQVT 65
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
EE + E +K E E+ D R++LD + ++ L +E ++ E DL+
Sbjct: 66 EREEVRSREVSGIKELYETELADARRSLDDTARERARLQLELSKISVEHEDLR 118
>gi|147899049|ref|NP_001089891.1| lamin-L(III) [Xenopus laevis]
gi|80479331|gb|AAI08624.1| MGC131227 protein [Xenopus laevis]
Length = 622
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
S P PGSP T ISR QEK +L++LNDRLA YIE V+ L+ DK+ L+ L EE +
Sbjct: 14 SAAPSPGSP---TRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEREEVSS 70
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
E ++ E E+ D RK LD+ ++ ++ L +E
Sbjct: 71 REVTNLRQLYETELADARKLLDQTANERARLQVE 104
>gi|426219007|ref|XP_004003722.1| PREDICTED: LOW QUALITY PROTEIN: prelamin-A/C [Ovis aries]
Length = 676
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 40 SQPPRPG-SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH 98
S+P R S L P+ R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE
Sbjct: 16 SRPARSYPSSLCPSAXPRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 75
Query: 99 TTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KAA E E+ D RK LD + ++ L +E ++ +E +LK
Sbjct: 76 SREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELK 122
>gi|10803365|emb|CAC13104.1| nuclear lamin [Branchiostoma lanceolatum]
Length = 630
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ LSPT ++R QEK EL+ LNDRLAQYI+ V+ L+ + + L + S EE E +K
Sbjct: 37 TQLSPTRLTRMQEKVELQWLNDRLAQYIDRVRYLEAENSVLWSRVTSSEEITQREVTNIK 96
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
+ E+E+ D RK LD + K+ + IE
Sbjct: 97 SMFEQELTDARKLLDDTAKEKARVQIE 123
>gi|348522746|ref|XP_003448885.1| PREDICTED: lamin-B2-like [Oreochromis niloticus]
Length = 579
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK EL++LNDRLA YI+ V+ L+ + L + EE T E +K
Sbjct: 19 TPLSPTRISRLQEKQELQHLNDRLAVYIDRVRALELENDRLMVKVSEKEEVTTREVTGLK 78
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
+ E E+ D R+ LD + ++ L I+
Sbjct: 79 SLYEAELADARRVLDETAKERARLQID 105
>gi|339253866|ref|XP_003372156.1| lamin-L [Trichinella spiralis]
gi|316967482|gb|EFV51899.1| lamin-L [Trichinella spiralis]
Length = 541
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SPL+PT SR QEK++L++LNDRLAQYIE V++L+ + L S+ + E+ + E ++
Sbjct: 39 SPLTPTCQSRLQEKHQLQHLNDRLAQYIERVRQLEAENQRLSLSIRNTEDIVSKERNSLR 98
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRR---LLDEL 141
E+E+ + R+ LD S +K+ +E + +DEL
Sbjct: 99 DTYERELAEARRLLDECSKAKARAFLELNKNMTYMDEL 136
>gi|4886319|emb|CAB43346.1| lamin [Hydra vulgaris]
Length = 549
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P + PR G SP + +R QEK EL LNDRLA YI+ ++ L+ L + + +ES
Sbjct: 5 PDVRSPRYGYQ-SPNVRTRVQEKEELSGLNDRLATYIDRMRYLEQQNTRLSAEITTSKES 63
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
T E VKA E E+ + R+ LD + K+ L +E +L + DL++K
Sbjct: 64 VTREVGNVKAMFEAELGEARRLLDETAKDKALLQLENNKLTSLVEDLRHK 113
>gi|148236667|ref|NP_001081545.1| lamin-L(III) [Xenopus laevis]
gi|64880|emb|CAA31567.1| unnamed protein product [Xenopus laevis]
Length = 583
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT ISR QEK +L++LNDRLA YIE V+ L+ DK+ L+ L EE + E ++
Sbjct: 18 SPGSPTRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEREEVSSREVTNLR 77
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
E E+ D RK LD+ ++ ++ L +E
Sbjct: 78 QLYETELADARKLLDQTANERARLQVE 104
>gi|194759125|ref|XP_001961800.1| GF15147 [Drosophila ananassae]
gi|190615497|gb|EDV31021.1| GF15147 [Drosophila ananassae]
Length = 624
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS +S+R T P+ + S+ R S ++ P SQ + SPLSPT SR EK
Sbjct: 1 MSSKSRRAGTATPQPTGT--STPRAPSAGPQQHHHQPPPSQSQQAASPLSPTRHSRVAEK 58
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K+ E E+ + R+ L
Sbjct: 59 VELQNLNDRLATYIDRVRNLETENSRLSIEVQTTRDTVTRETTNMKSMFENELGETRRLL 118
Query: 121 DRESSSKSALAIEKRRLLDELLDLKNK 147
D ++ ++ IE +RL ++ +LK K
Sbjct: 119 DEQARDRARAEIENKRLWEQNEELKAK 145
>gi|125987443|ref|XP_001357484.1| Lam [Drosophila pseudoobscura pseudoobscura]
gi|54645816|gb|EAL34554.1| Lam [Drosophila pseudoobscura pseudoobscura]
Length = 617
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 30 REEPPQPQPQSQ----PPRPG----------SPLSPTIISRRQEKNELKNLNDRLAQYIE 75
R PQP S PP G SPLSPT SR EK EL+NLNDRLA YI+
Sbjct: 7 RASAATPQPGSTSTPLPPNVGPVPQQQQQASSPLSPTRHSRVAEKVELQNLNDRLATYID 66
Query: 76 LVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKR 135
V+ L+ + L + + ++ T E +K E E+ + R+ LD + K+ I+ +
Sbjct: 67 RVRNLETENTRLTIEVQTSRDTTTRETTNLKNIYEGELVETRRMLDETARDKARAEIDLK 126
Query: 136 RLLDELLDLK 145
R+ +E +LK
Sbjct: 127 RIWEENEELK 136
>gi|170035295|ref|XP_001845506.1| lamin Dm0 [Culex quinquefasciatus]
gi|167877156|gb|EDS40539.1| lamin Dm0 [Culex quinquefasciatus]
Length = 567
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ LSP+ SR EKN L NLNDRLA YIE V+ L+ + + L + + +E+ + E +K
Sbjct: 37 TALSPSRRSRLHEKNSLMNLNDRLACYIERVRYLEQENSRLSLEMAAYQETASREVSSLK 96
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
+ E E+ D RK LD + K+ + I+ +R +E
Sbjct: 97 SIYEGELGDARKLLDETARDKARVEIDAKRYWEE 130
>gi|125959|sp|P10999.2|LAML3_XENLA RecName: Full=Lamin-L(III); AltName: Full=Lamin-B3; Flags:
Precursor
gi|50604020|gb|AAH78034.1| LOC397910 protein [Xenopus laevis]
Length = 583
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
SP SPT ISR QEK +L++LNDRLA YIE V+ L+ DK+ L+ L EE + E ++
Sbjct: 18 SPGSPTRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEREEVSSREVTNLR 77
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
E E+ D RK LD+ ++ ++ L +E
Sbjct: 78 QLYETELADARKLLDQTANERARLQVE 104
>gi|147904084|ref|NP_001080053.1| lamin B1 [Xenopus laevis]
gi|27371024|gb|AAH41185.1| Lmnb1-prov protein [Xenopus laevis]
Length = 584
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK++L+ LNDRLA YI+ V+ L+++ + L + EE + E +K
Sbjct: 20 TPLSPTRISRLQEKSDLQELNDRLAVYIDKVRSLESENSLLHVQVTEREEVRSREVSGIK 79
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E E+ D R++LD + ++ L +E ++ E DL+
Sbjct: 80 ELYETELADTRRSLDDTARERAKLQLELSKISVEHQDLQ 118
>gi|3414963|gb|AAC31543.1| lamin B1 [Xenopus laevis]
Length = 584
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK++L+ LNDRLA YI+ V+ L+++ + L + EE + E +K
Sbjct: 20 TPLSPTRISRLQEKSDLQELNDRLAVYIDKVRSLESENSLLHVQVTEREEVRSREVSGIK 79
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E E+ D R++LD + ++ L +E ++ E DL+
Sbjct: 80 ELYETELADTRRSLDDTARERAKLQLELSKISVEHQDLQ 118
>gi|195155468|ref|XP_002018626.1| GL25851 [Drosophila persimilis]
gi|194114779|gb|EDW36822.1| GL25851 [Drosophila persimilis]
Length = 331
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 34 PQPQPQSQP--PRPG----------SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQ 81
PQP S P P G SPLSPT SR EK EL+NLNDRLA YI+ V+ L+
Sbjct: 13 PQPGSTSTPLPPNVGPVPQQQQQASSPLSPTRHSRVAEKVELQNLNDRLATYIDRVRNLE 72
Query: 82 NDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ L + + ++ T E +K E E+ + R+ LD + K+ I+ +R+ +E
Sbjct: 73 TENTRLTIEVQTSRDTTTRETTNLKNIYEGELVETRRMLDEMARDKARAEIDLKRIWEEN 132
Query: 142 LDLK 145
+LK
Sbjct: 133 EELK 136
>gi|256083880|ref|XP_002578163.1| lamin [Schistosoma mansoni]
Length = 2086
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASE 110
P ISR +EK+EL +LNDRLA YI+ V+KL+ DK L + ++ E ++ ++ + E
Sbjct: 53 PLTISRSEEKDELAHLNDRLAGYIDYVRKLELDKQKLTRRIQTVTEERMSKVEEARKTYE 112
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
EI +R +D + KS ++ +++ DEL D+K K
Sbjct: 113 DEITALRNLVDDLAKQKSKAELDSKQMRDELNDIKMK 149
>gi|195381973|ref|XP_002049707.1| GJ21743 [Drosophila virilis]
gi|194144504|gb|EDW60900.1| GJ21743 [Drosophila virilis]
Length = 622
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
QEK EL++LNDRLA YI+ ++ L+N+ L L+ +++ E +KA EKE+ R
Sbjct: 46 QEKEELQHLNDRLACYIDRMRHLENENGRLTQELHLAQDTVNRETSNLKAVYEKELAAAR 105
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K LD + K+ L I+ +RL +E DLK +
Sbjct: 106 KLLDETAKEKAKLEIDIKRLWEENDDLKQR 135
>gi|256083882|ref|XP_002578164.1| lamin [Schistosoma mansoni]
Length = 1885
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASE 110
P ISR +EK+EL +LNDRLA YI+ V+KL+ DK L + ++ E ++ ++ + E
Sbjct: 53 PLTISRSEEKDELAHLNDRLAGYIDYVRKLELDKQKLTRRIQTVTEERMSKVEEARKTYE 112
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
EI +R +D + KS ++ +++ DEL D+K K
Sbjct: 113 DEITALRNLVDDLAKQKSKAELDSKQMRDELNDIKMK 149
>gi|195388484|ref|XP_002052910.1| GJ19583 [Drosophila virilis]
gi|194149367|gb|EDW65065.1| GJ19583 [Drosophila virilis]
Length = 623
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGS------------P 48
MS +S+R T P GS+S P+P P S P + + P
Sbjct: 1 MSSKSRRAGTATPQP----GSTS---------TPRP-PSSGPQQQSTSSHSQSQQQASSP 46
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAA 108
LSPT SR EK EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K
Sbjct: 47 LSPTRHSRLVEKVELQNLNDRLACYIDRVRNLETENSRLSIEVQTTRDTVTRETTNIKNI 106
Query: 109 SEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E E+ + R+ LD + ++ L I+ +RL +E
Sbjct: 107 YETELLEARRMLDELARERARLEIDTKRLWEE 138
>gi|54037965|gb|AAH84199.1| LOC397911 protein [Xenopus laevis]
Length = 582
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+++ + L + EE + E +K
Sbjct: 20 TPLSPTRITRLQEKVDLQELNDRLALYIDTVRSLESENSLLHVQVTEREEVRSREVSGIK 79
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E E+ D R++LD + K+ L +E ++ E DL+
Sbjct: 80 ELYETELADARRSLDDTAREKARLQLELSKVSVEHQDLQ 118
>gi|148229806|ref|NP_001081547.1| lamin-L(I) [Xenopus laevis]
gi|125955|sp|P09010.1|LAML1_XENLA RecName: Full=Lamin-L(I); Flags: Precursor
gi|64882|emb|CAA29651.1| unnamed protein product [Xenopus laevis]
Length = 583
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT I+R QEK +L+ LNDRLA YI+ V+ L+++ + L + EE + E +K
Sbjct: 20 TPLSPTRITRLQEKVDLQELNDRLALYIDTVRSLESENSLLHVQVTEREEVRSREVSGIK 79
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E E+ D R++LD + K+ L +E ++ E DL+
Sbjct: 80 ELYETELADARRSLDDTAREKARLQLELSKVSVEHQDLQ 118
>gi|350646247|emb|CCD59081.1| lamin, putative [Schistosoma mansoni]
Length = 6522
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASE 110
P ISR +EK+EL +LNDRLA YI+ V+KL+ DK L + ++ E ++ ++ + E
Sbjct: 53 PLTISRSEEKDELAHLNDRLAGYIDYVRKLELDKQKLTRRIQTVTEERMSKVEEARKTYE 112
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
EI +R +D + KS ++ +++ DEL D+K K
Sbjct: 113 DEITALRNLVDDLAKQKSKAELDSKQMRDELNDIKMK 149
>gi|410986930|ref|XP_003999761.1| PREDICTED: prelamin-A/C, partial [Felis catus]
Length = 583
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +KAA E E+
Sbjct: 1 ITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAEL 60
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D RK LD + ++ L +E ++ +E +LK
Sbjct: 61 GDARKTLDSVAKERARLQLELSKVREEFKELK 92
>gi|348499982|ref|XP_003437552.1| PREDICTED: lamin-L(III)-like [Oreochromis niloticus]
Length = 600
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
S SP+ +SR QEK+EL+ LNDRLA YI+ VQ+L+++++ + L EE+ ++ V
Sbjct: 40 ASSTSPSRLSRMQEKDELRGLNDRLANYIQRVQELESERSYMLLKLEEKEEARSS----V 95
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
+ E+E+ D+RK+LD + ++ L I+ L +E
Sbjct: 96 RRLYEEELADVRKSLDGLAQERAQLQIDYGNLCEE 130
>gi|195342751|ref|XP_002037962.1| GM18554 [Drosophila sechellia]
gi|194132812|gb|EDW54380.1| GM18554 [Drosophila sechellia]
Length = 622
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK 60
MS +S+R T TP S+ R S P P P + SPLSPT SR EK
Sbjct: 1 MSSKSRRAGTA--TPQPGNTSTPRPPSA---GPQPPPPSTHSQTASSPLSPTRHSRVAEK 55
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL 120
EL+NLNDRLA YI+ V+ L+ + + L + + ++ T E +K E E+ + R+ L
Sbjct: 56 VELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLL 115
Query: 121 DRESSSKSALAIEKRRLLDE 140
D + ++ I+ +RL +E
Sbjct: 116 DDTARDRARAEIDIKRLWEE 135
>gi|13161384|dbj|BAB32978.1| lamin B2 [Carassius auratus]
Length = 586
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+PLSPT ISR QEK EL LNDRLA YI+ V+ L+ + L + EE T E +K
Sbjct: 18 TPLSPTRISRLQEKQELSALNDRLAVYIDRVRSLELENDRLLVKVSEKEEVTTREVSGIK 77
Query: 107 AASEKEIEDIRKALDRESSSKSALAIE 133
+ E E+ D R+ LD + ++ L I+
Sbjct: 78 SLYEAELADARRVLDETARERARLQID 104
>gi|453180|emb|CAA53945.1| lamin A [Rattus norvegicus]
Length = 640
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I+R QEK +L+ LNDRLA YI+ V+ L+ + A L + EE + E +KAA E E+
Sbjct: 1 ITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAEL 60
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D RK LD + ++ L +E ++ +E +LK
Sbjct: 61 GDARKTLDSVAKERARLQLELSKVREEFKELK 92
>gi|358337894|dbj|GAA32167.2| lamin Dm0 [Clonorchis sinensis]
Length = 673
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 1 MSGRSKRG--ATPAKT---PSASRGSSSRQTSEVREEPPQPQPQ-SQPPRPGSPLSPTII 54
MS RS++ A KT PS S S S + R P+ S+ R SPLS I
Sbjct: 1 MSARSRKQKVAETEKTEGSPSVSTISKSVTIEKTRLSSGTPRHSLSRNERSSSPLS---I 57
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR +EK+EL +LNDRLA YI+ V+KL+ DK L ++S+ E ++ ++ + E EI
Sbjct: 58 SRNEEKDELAHLNDRLAGYIDYVRKLELDKERLTRRIHSVTEERMSKVEEARKTYEDEIL 117
Query: 115 DIRKALD 121
+R +D
Sbjct: 118 ALRNLVD 124
>gi|195118100|ref|XP_002003578.1| GI17991 [Drosophila mojavensis]
gi|193914153|gb|EDW13020.1| GI17991 [Drosophila mojavensis]
Length = 624
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASE 110
PT SR EK EL+NLNDRLA YI+ V+ L+ + A L + + ++ T E +K+ E
Sbjct: 50 PTRHSRLVEKVELQNLNDRLACYIDRVRNLETENARLTIEVQTTRDTVTKETTNIKSIYE 109
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E+ + R+ LD + ++ L I+ +RL +E
Sbjct: 110 TELLEARRMLDELARERARLEIDTKRLWEE 139
>gi|15553083|dbj|BAB64909.1| intermediate filament b [Dugesia japonica]
gi|15553085|dbj|BAB64910.1| intermediate filament b [Dugesia japonica]
Length = 610
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 11 PAKTPSASRGSSSRQTSEVREE-PPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
PA + + ++ +SS +T E+++ P + S ++ + R +EKNEL+ LNDR
Sbjct: 38 PAISTAGNQNASSIRTIEMKKSYGVSATPGATSNIVHSGVNNLMNGREKEKNELQELNDR 97
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
A YI+ V+ L+++ L L +++ E ++KA + ++ +R++LD+ +SK+
Sbjct: 98 FANYIDKVRSLEDENKRLTDELNDLKDQWGKETARIKALYDSDMSQLRRSLDQAEASKAQ 157
Query: 130 LAIEKRRLLD 139
L ++ L D
Sbjct: 158 LEMKINTLED 167
>gi|281347289|gb|EFB22873.1| hypothetical protein PANDA_015544 [Ailuropoda melanoleuca]
Length = 526
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E +K E E
Sbjct: 1 SRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EREEVTTREVSGIKTLYEAE 58
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ D R+ LD + ++ L IE +L EL
Sbjct: 59 LADARRVLDETARERARLQIELGKLKAEL 87
>gi|338726544|ref|XP_001915846.2| PREDICTED: lamin-B2-like [Equus caballus]
Length = 537
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 23/97 (23%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVR-----------------------VSG 48
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
+K E E+ D R+ LD + ++ L IE +L EL
Sbjct: 49 IKTLYESELADARRVLDETARERAQLQIEIGKLHTEL 85
>gi|301781086|ref|XP_002925963.1| PREDICTED: lamin-B2-like [Ailuropoda melanoleuca]
Length = 545
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S EE T E +K E E
Sbjct: 78 SRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS--EREEVTTREVSGIKTLYEAE 135
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ D R+ LD + ++ L IE +L EL
Sbjct: 136 LADARRVLDETARERARLQIELGKLKAEL 164
>gi|260813806|ref|XP_002601607.1| hypothetical protein BRAFLDRAFT_124339 [Branchiostoma floridae]
gi|229286906|gb|EEN57619.1| hypothetical protein BRAFLDRAFT_124339 [Branchiostoma floridae]
Length = 619
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK E++ LN RLA YI+ V+ L+ LE + +++ H F ++K E+EI +
Sbjct: 130 RVQEKEEMQTLNQRLAGYIDKVRFLETRNEELEIEVRALQAGHQN-FHQMKEMFEQEIRE 188
Query: 116 IRKALDRESSSKSALAIEKRRLLDEL 141
+R+A+D S+ K+ + +++ L +EL
Sbjct: 189 LRRAIDSLSNEKAIVEVDRDTLGEEL 214
>gi|225716786|gb|ACO14239.1| Lamin-LII [Esox lucius]
Length = 92
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYS 90
S+ G+PLSPT ISR QEK +L++LNDRLA YI+ V+ +L+ND+ ++ S
Sbjct: 7 SRAASAGTPLSPTRISRLQEKQDLQHLNDRLAVYIDRVRSLELENDRLMVKVS 59
>gi|3549158|gb|AAC34573.1| LAM2_HUMAN, partial CDS [Homo sapiens]
Length = 68
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKASLEYS 90
P +PLSPT +SR QEK EL+ LNDRLA YI+ V+ +L+ND+ L+ S
Sbjct: 12 PATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS 59
>gi|348532767|ref|XP_003453877.1| PREDICTED: alpha-internexin-like [Oreochromis niloticus]
Length = 481
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V+ L+ LE L ++ + H TE ++ ++EI
Sbjct: 86 IIRTNEKEQMQGLNDRFAMFIEKVRNLEQHNKVLETELIALRQRH-TEPSRLAELYQQEI 144
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD + KS L IE+ + D+L L+ K
Sbjct: 145 RELRSQLDELNGEKSQLMIERDNIEDDLQKLRGK 178
>gi|417412323|gb|JAA52551.1| Putative nuclear envelope protein lamin intermediate filament
superfamily, partial [Desmodus rotundus]
Length = 689
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKA 119
K +L+ LNDRLA YI+ V+ L+ + A L + EE + E +KAA E E+ D RK
Sbjct: 1 KEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVISREVSGIKAAYEAELGDARKT 60
Query: 120 LDRESSSKSALAIEKRRLLDELLDLK 145
LD + ++ L +E ++ +E +LK
Sbjct: 61 LDSVAKERARLQLELSKVREEFKELK 86
>gi|320382349|gb|ADW27183.1| intermediate filament b [Schmidtea mediterranea]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 11 PAKTPSASRGSSSRQTSEV-REEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
P + ++G S+ +T E+ + P + + ++ + R +EKNEL++LNDR
Sbjct: 21 PTVSTVGTQGGSNIRTIEMSKSYGLSSTPGATSNXVHNGVNNLMNGREKEKNELQDLNDR 80
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
A YI+ V+ L+++ L L +++ E ++K + ++ +R++LD+ +K+
Sbjct: 81 FANYIDKVRNLEDENKRLSDELVDLKDQWGKETARIKTFYDNDMIQLRRSLDQAEGAKAQ 140
Query: 130 LAIEKRRLLDELLD 143
+ ++ L D +L+
Sbjct: 141 MEMKINTLEDLILE 154
>gi|345327432|ref|XP_001516217.2| PREDICTED: neurofilament light polypeptide-like [Ornithorhynchus
anatinus]
Length = 656
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI D
Sbjct: 95 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRD 153
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R A + +S K AL E+ L + L L+ +
Sbjct: 154 LRLAAEDATSEKQALQGEREGLEETLRALQAR 185
>gi|349802537|gb|AEQ16741.1| putative lamin b2 [Pipa carvalhoi]
Length = 86
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
QEK EL++LNDRLA YI+ V+ L+ + + L + EE T E +K E E+ D R
Sbjct: 1 QEKEELRHLNDRLAVYIDRVRSLEVENSQLMVQISEKEEVTTREVSGIKILYESELADTR 60
Query: 118 KALDRESSSKSALAIE 133
K LD + ++ L IE
Sbjct: 61 KVLDETARERARLQIE 76
>gi|260799146|ref|XP_002594558.1| hypothetical protein BRAFLDRAFT_77526 [Branchiostoma floridae]
gi|229279793|gb|EEN50569.1| hypothetical protein BRAFLDRAFT_77526 [Branchiostoma floridae]
Length = 549
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 42 PPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
P LS ++R EK EL +LNDR A YI+ V+ LQ + LE + I+ES E
Sbjct: 79 PAGALQTLSDARMTRAHEKQELSHLNDRFASYIDKVRYLQERNSKLEAQI-KIQESR--E 135
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEK 134
+K EKE+ D+R +D S+ K+ L IE+
Sbjct: 136 APNIKDLYEKELRDLRALVDELSNDKAQLEIER 168
>gi|729824|sp|Q04948.1|IFE_BRALA RecName: Full=Non-neuronal cytoplasmic intermediate filament
protein
gi|5725|emb|CAA45827.1| cytoplasmic intermediate filament protein [Branchiostoma
lanceolatum]
Length = 464
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 42 PPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
P LS ++R EK EL +LNDR A YI+ V+ LQ + LE + I+ES E
Sbjct: 81 PAGALQTLSDARMTRAHEKQELSHLNDRFASYIDKVRYLQERNSKLEAQI-KIQESR--E 137
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+K EKE+ D+R +D S+ K+ L IE+ ++ D K K
Sbjct: 138 APNIKDLYEKELRDLRALVDELSNDKAQLEIERNNWQEQAEDYKMK 183
>gi|260813227|ref|XP_002601320.1| hypothetical protein BRAFLDRAFT_81362 [Branchiostoma floridae]
gi|229286614|gb|EEN57332.1| hypothetical protein BRAFLDRAFT_81362 [Branchiostoma floridae]
Length = 347
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R QE+ EL LN+R A YIE ++ LQ +LE + ++ + TT KA EKE
Sbjct: 65 ARAQEREELSALNNRFASYIEKMRSLQQRNCTLEAQVLKLQATETT--AHTKALYEKETR 122
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R +D S K+ + +E+ + ++ D K K
Sbjct: 123 DLRTLVDELSEEKAKMVLERNQWREQAEDYKRK 155
>gi|3201495|emb|CAA11447.1| intermediate filament protein B1 [Branchiostoma floridae]
Length = 386
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 42 PPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
P LS ++R EK EL +LNDR A YI+ V+ LQ + LE + I+ES E
Sbjct: 7 PAGALQTLSDARMTRAHEKQELSHLNDRFASYIDKVRYLQERNSKLEAQI-KIQESR--E 63
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEK 134
+K EKE+ D+R +D S+ K+ L IE+
Sbjct: 64 APNIKDLYEKELRDLRALVDELSNDKAQLEIER 96
>gi|148232505|ref|NP_001081414.1| neurofilament light polypeptide [Xenopus laevis]
gi|548352|sp|P35616.3|NFL_XENLA RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=Neurofilament triplet L protein
gi|1107469|gb|AAA83018.1| neurofilament protein [Xenopus laevis]
Length = 544
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R QEK +L++LNDR A +IE V +L+ LE L + + H E +++ EKE+
Sbjct: 79 IVRTQEKVQLQDLNDRFANFIERVHELEQRNKVLEAELLLLRQKH-NEPSRLRDMYEKEV 137
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R A + S + L E+ RL D L L+ +
Sbjct: 138 RDVRLAQEEASGDRQTLRNERERLEDALRVLQGR 171
>gi|348529730|ref|XP_003452366.1| PREDICTED: alpha-internexin-like [Oreochromis niloticus]
Length = 450
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 1 MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPT-IIS---- 55
MSG S RG ++ +ASR S+S T R S P LS T ++S
Sbjct: 29 MSGESPRGPASLRSMAASRNSASSVTL-YRRGGRTSTSFSTVPTASLDLSQTSVVSNEFK 87
Query: 56 --RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
R EK +L+ LNDR A +I+ V+ L+ LE L ++ + + E ++ ++E+
Sbjct: 88 VIRTNEKEQLQGLNDRFAMFIDKVRHLEQQNKVLETELVTLRQKQS-ERPRIAHLYQQEM 146
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ + K+ + IE+ + DEL L K
Sbjct: 147 RDLRSQLEELNREKNRVLIERNNMEDELQKLSAK 180
>gi|347944100|gb|AEP27818.1| Hau-lamin1 [Helobdella sp. Austin]
Length = 603
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
P SPT+ISR +EK +L LNDRLA YIE V+ L+ + L + S EES ++E K+K+
Sbjct: 41 PASPTLISRMEEKQQLAGLNDRLAAYIERVRSLEFENGRLVKVIKSYEESSSSESAKIKS 100
Query: 108 ASEKEIEDIRKALDRESSSKSALAIE 133
E E+ D RK LD K+ + +E
Sbjct: 101 LFEAELNDARKLLDEMGKEKAKVQLE 126
>gi|334313487|ref|XP_001372723.2| PREDICTED: neurofilament light polypeptide-like [Monodelphis
domestica]
Length = 633
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI D
Sbjct: 175 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRD 233
Query: 116 IRKALDRESSSKSAL 130
+R A++ S+ K AL
Sbjct: 234 LRLAVEDASAEKQAL 248
>gi|426222227|ref|XP_004005300.1| PREDICTED: neurofilament light polypeptide, partial [Ovis aries]
Length = 484
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
SQP + L R QEK +L++LNDR A +IE V +L+ LE L + + H
Sbjct: 4 SQPAAISNDLKSI---RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH- 59
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+E + +A E+EI D+R A + ++ K AL E+ L + L +L+
Sbjct: 60 SEPSRFRALYEQEIRDLRLAAEDATNEKQALQGEREGLEETLRNLQ 105
>gi|257205786|emb|CAX82544.1| lamin B2 [Schistosoma japonicum]
Length = 128
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 1 MSGRS-KRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQE 59
MS R+ K+ A ++ AS S SR ++ R P+ R SP ISR +E
Sbjct: 1 MSARARKQKAMESERSEASPTSFSRSSTIERSHTSSGSPRKSFSRSERSSSPLTISRSEE 60
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
K+EL +LNDRLA YI+ V+KL+ DK L + ++ E
Sbjct: 61 KDELAHLNDRLAGYIDYVRKLELDKQKLTKRIQTVTE 97
>gi|156372931|ref|XP_001629288.1| predicted protein [Nematostella vectensis]
gi|156216285|gb|EDO37225.1| predicted protein [Nematostella vectensis]
Length = 580
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 38 PQSQPPRPGSPLSPTII-----------SRRQEKNELKNLNDRLAQYIELVQKLQNDKAS 86
P S P +P+S + I +R QEK EL++LNDRLA YI+ V+ L+ + +
Sbjct: 8 PASSSSTPKTPVSSSRIMGSSPPGSAKFTRAQEKAELQHLNDRLATYIDRVKNLEQENSK 67
Query: 87 LEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
L + ++ E +K+ E E+ D R+ LD + K+ IE + ++ + KN
Sbjct: 68 LRSEVTVSRKTVEREVDSMKSLYETELADARRLLDETAKEKAKQQIESSKNSNDAQEFKN 127
Query: 147 K 147
K
Sbjct: 128 K 128
>gi|143811426|sp|P02547.3|NFL_PIG RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=68 kDa neurofilament protein; AltName:
Full=Neurofilament triplet L protein
Length = 549
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 86 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAQLLVLRQKH-SEPSRFRALYEQEIRD 144
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 145 LRLAAEDATNEKQALQGEREGLEETLRNLQ 174
>gi|324500130|gb|ADY40071.1| Intermediate filament protein A [Ascaris suum]
Length = 1245
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ +LNDRLA YIE V+ L+ L L + + V+A E E++
Sbjct: 732 TREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDLLRGRWGKDTLSVRAMYEGELQ 791
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ RK ++ + + L E R+LLDEL + + K
Sbjct: 792 EARKLVNDTNRQREELEKEIRKLLDELSEYRRK 824
>gi|197098512|ref|NP_001126494.1| neurofilament light polypeptide [Pongo abelii]
gi|55731693|emb|CAH92552.1| hypothetical protein [Pongo abelii]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|194208268|ref|XP_001914959.1| PREDICTED: neurofilament light polypeptide-like [Equus caballus]
Length = 544
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|410956200|ref|XP_003984731.1| PREDICTED: neurofilament light polypeptide [Felis catus]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|332212722|ref|XP_003255468.1| PREDICTED: alpha-internexin [Nomascus leucogenys]
Length = 499
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS++S +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARSQALLERDGLAEEVQRLRAR 181
>gi|17221340|emb|CAC83053.1| desmin [Oncorhynchus mykiss]
Length = 459
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L+ A+L + IE E +V E+E+
Sbjct: 89 TRTNEKAELQHLNDRFASYIEKVRFLEQQNATL---VVEIERLRGHEPTRVAEMYEEEMR 145
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R+ +D S+ ++ + +E+ L D+L LK
Sbjct: 146 ELRRQVDGMSNDRARMEVERDNLADDLQKLK 176
>gi|440899816|gb|ELR51065.1| Neurofilament light polypeptide [Bos grunniens mutus]
Length = 555
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|55733663|emb|CAH93508.1| hypothetical protein [Pongo abelii]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDTTNEKQALQGEREGLEETLRNLQ 175
>gi|27806523|ref|NP_776546.1| neurofilament light polypeptide [Bos taurus]
gi|2506775|sp|P02548.3|NFL_BOVIN RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=68 kDa neurofilament protein; AltName: Full=Micro
glutamic acid-rich protein; AltName: Full=Neurofilament
triplet L protein
gi|1806646|gb|AAB41543.1| neurofilament L subunit [Bos taurus]
gi|109658281|gb|AAI18241.1| Neurofilament, light polypeptide [Bos taurus]
gi|296484575|tpg|DAA26690.1| TPA: neurofilament light polypeptide [Bos taurus]
Length = 555
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|346716234|ref|NP_001231260.1| neurofilament light polypeptide [Sus scrofa]
Length = 552
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|90082128|dbj|BAE90345.1| unnamed protein product [Macaca fascicularis]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|380793205|gb|AFE68478.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793207|gb|AFE68479.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793209|gb|AFE68480.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793211|gb|AFE68481.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793213|gb|AFE68482.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793215|gb|AFE68483.1| neurofilament light polypeptide, partial [Macaca mulatta]
gi|380793217|gb|AFE68484.1| neurofilament light polypeptide, partial [Macaca mulatta]
Length = 513
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|14249342|ref|NP_116116.1| alpha-internexin [Homo sapiens]
gi|20141266|sp|Q16352.2|AINX_HUMAN RecName: Full=Alpha-internexin; Short=Alpha-Inx; AltName: Full=66
kDa neurofilament protein; Short=NF-66;
Short=Neurofilament-66; AltName: Full=Neurofilament 5
gi|13623507|gb|AAH06359.1| Internexin neuronal intermediate filament protein, alpha [Homo
sapiens]
gi|119570038|gb|EAW49653.1| internexin neuronal intermediate filament protein, alpha, isoform
CRA_a [Homo sapiens]
gi|123984627|gb|ABM83659.1| internexin neuronal intermediate filament protein, alpha [synthetic
construct]
gi|123998609|gb|ABM86906.1| internexin neuronal intermediate filament protein, alpha [synthetic
construct]
Length = 499
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS++S +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARSQALLERDGLAEEVQRLRAR 181
>gi|105990539|ref|NP_006149.2| neurofilament light polypeptide [Homo sapiens]
gi|114619309|ref|XP_519665.2| PREDICTED: neurofilament light polypeptide isoform 3 [Pan
troglodytes]
gi|397506186|ref|XP_003823612.1| PREDICTED: neurofilament light polypeptide [Pan paniscus]
gi|426359145|ref|XP_004046845.1| PREDICTED: neurofilament light polypeptide [Gorilla gorilla
gorilla]
gi|62511894|sp|P07196.3|NFL_HUMAN RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=68 kDa neurofilament protein; AltName:
Full=Neurofilament triplet L protein
gi|229891198|sp|Q5R408.2|NFL_PONAB RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=Neurofilament triplet L protein
gi|24658018|gb|AAH39237.1| Neurofilament, light polypeptide [Homo sapiens]
gi|25987101|gb|AAN74826.1| light molecular weight neurofilament protein [Homo sapiens]
gi|55732040|emb|CAH92727.1| hypothetical protein [Pongo abelii]
gi|61364506|gb|AAX42554.1| neurofilament light polypeptide [synthetic construct]
gi|119584002|gb|EAW63598.1| neurofilament, light polypeptide 68kDa, isoform CRA_a [Homo
sapiens]
gi|119584003|gb|EAW63599.1| neurofilament, light polypeptide 68kDa, isoform CRA_a [Homo
sapiens]
gi|119584004|gb|EAW63600.1| neurofilament, light polypeptide 68kDa, isoform CRA_a [Homo
sapiens]
gi|123984453|gb|ABM83572.1| neurofilament, light polypeptide 68kDa [synthetic construct]
gi|123998417|gb|ABM86810.1| neurofilament, light polypeptide 68kDa [synthetic construct]
gi|208966850|dbj|BAG73439.1| neurofilament, light polypeptide 68kDa [synthetic construct]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|119570039|gb|EAW49654.1| internexin neuronal intermediate filament protein, alpha, isoform
CRA_b [Homo sapiens]
Length = 494
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS++S +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARSQALLERDGLAEEVQRLRAR 181
>gi|359322821|ref|XP_003639928.1| PREDICTED: neurofilament light polypeptide-like [Canis lupus
familiaris]
Length = 544
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|332247565|ref|XP_003272930.1| PREDICTED: neurofilament light polypeptide [Nomascus leucogenys]
Length = 542
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|402877800|ref|XP_003902602.1| PREDICTED: neurofilament light polypeptide [Papio anubis]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|388453627|ref|NP_001252774.1| neurofilament light polypeptide [Macaca mulatta]
gi|355569531|gb|EHH25451.1| Neurofilament light polypeptide [Macaca mulatta]
gi|387540092|gb|AFJ70673.1| neurofilament light polypeptide [Macaca mulatta]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|296221730|ref|XP_002756876.1| PREDICTED: neurofilament light polypeptide-like [Callithrix
jacchus]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|60810149|gb|AAX36130.1| neurofilament light polypeptide [synthetic construct]
Length = 544
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|403292394|ref|XP_003937233.1| PREDICTED: neurofilament light polypeptide [Saimiri boliviensis
boliviensis]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|444721845|gb|ELW62556.1| Neurofilament light polypeptide [Tupaia chinensis]
Length = 549
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|55731618|emb|CAH92515.1| hypothetical protein [Pongo abelii]
Length = 544
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQVQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|348587304|ref|XP_003479408.1| PREDICTED: neurofilament light polypeptide-like [Cavia porcellus]
Length = 545
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|114632648|ref|XP_001134873.1| PREDICTED: alpha-internexin isoform 2 [Pan troglodytes]
gi|397510401|ref|XP_003825585.1| PREDICTED: alpha-internexin [Pan paniscus]
gi|426366061|ref|XP_004050083.1| PREDICTED: alpha-internexin [Gorilla gorilla gorilla]
gi|410213688|gb|JAA04063.1| internexin neuronal intermediate filament protein, alpha [Pan
troglodytes]
gi|410264172|gb|JAA20052.1| internexin neuronal intermediate filament protein, alpha [Pan
troglodytes]
gi|410301358|gb|JAA29279.1| internexin neuronal intermediate filament protein, alpha [Pan
troglodytes]
gi|410332427|gb|JAA35160.1| internexin neuronal intermediate filament protein, alpha [Pan
troglodytes]
Length = 499
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS++S +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARSQALLERDGLAEEVQRLRAR 181
>gi|431901210|gb|ELK08276.1| Neurofilament light polypeptide [Pteropus alecto]
Length = 542
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|395741976|ref|XP_002821158.2| PREDICTED: alpha-internexin isoform 1 [Pongo abelii]
Length = 499
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS++S +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARSQALLERDGLAEEVQRLRAR 181
>gi|116283387|gb|AAH16436.1| Nefl protein [Mus musculus]
Length = 510
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|200038|gb|AAA39814.1| neurofilament-L [Mus musculus]
Length = 542
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|39204499|ref|NP_035040.1| neurofilament light polypeptide [Mus musculus]
gi|97536879|sp|P08551.5|NFL_MOUSE RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=68 kDa neurofilament protein; AltName:
Full=Neurofilament triplet L protein
gi|20809811|gb|AAH29203.1| Neurofilament, light polypeptide [Mus musculus]
gi|76573286|gb|ABA46748.1| neurofilament protein L [Mus musculus]
gi|148704015|gb|EDL35962.1| neurofilament, light polypeptide [Mus musculus]
Length = 543
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|354467558|ref|XP_003496236.1| PREDICTED: neurofilament light polypeptide [Cricetulus griseus]
Length = 543
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|301757270|ref|XP_002914475.1| PREDICTED: neurofilament light polypeptide-like [Ailuropoda
melanoleuca]
Length = 544
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|281347201|gb|EFB22785.1| hypothetical protein PANDA_002373 [Ailuropoda melanoleuca]
Length = 497
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|119584005|gb|EAW63601.1| neurofilament, light polypeptide 68kDa, isoform CRA_b [Homo
sapiens]
Length = 504
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKAL-----DRESSSKSALA---IEKR--RLLDELLDLK 145
+R A +++ + ++ALA +EKR L+DE+ LK
Sbjct: 146 LRLAAEDATNEKQGADEAALARAELEKRIDSLMDEISFLK 185
>gi|55730073|emb|CAH91761.1| hypothetical protein [Pongo abelii]
Length = 561
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSHFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|13929098|ref|NP_113971.1| neurofilament light polypeptide [Rattus norvegicus]
gi|1709260|sp|P19527.3|NFL_RAT RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=68 kDa neurofilament protein; AltName:
Full=Neurofilament triplet L protein
gi|2642600|gb|AAB87069.1| light molecular-weight neurofilament [Rattus norvegicus]
gi|149030363|gb|EDL85419.1| neurofilament, light polypeptide, isoform CRA_a [Rattus norvegicus]
gi|226783|prf||1605173A neurofilament protein NF-L
Length = 542
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|261363560|gb|ACX71855.1| glial fibrillary acidic protein [Gekko japonicus]
Length = 446
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 1 MSGRSKR-GATPAKTPSASRGSSSRQTS----EVREEPPQPQPQSQPPRPGSPLSPTII- 54
+S KR G++P A R S R+ R + + S R G SP +
Sbjct: 6 LSSYGKRFGSSPTSVHQALRFSPGRRYVPSNPTTRFSVTKLKTASLSFRAGPKFSPDKVD 65
Query: 55 -------------SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
+R EK E+ LNDR A YIE V+ L+ L L I + T
Sbjct: 66 FSLADALNTEFKETRTNEKVEMMELNDRFASYIEKVRFLEQQNKVLVAELNQIRDKEPT- 124
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
K+ ++E+ ++R+ +D+ SSSK+ L IE+ L+++L +L++K
Sbjct: 125 --KLADIYQEELRELRRQVDQLSSSKARLEIERDNLVEDLNNLRHK 168
>gi|344235881|gb|EGV91984.1| Neurofilament light polypeptide [Cricetulus griseus]
Length = 554
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|355779581|gb|EHH64057.1| Neurofilament light polypeptide [Macaca fascicularis]
Length = 543
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|44890585|gb|AAH66952.1| NEFL protein [Homo sapiens]
Length = 284
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|327275800|ref|XP_003222660.1| PREDICTED: glial fibrillary acidic protein-like [Anolis
carolinensis]
Length = 445
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L I + T K+ ++E+
Sbjct: 79 TRTNEKVEMMELNDRFASYIEKVRFLEQQNKVLVTELNQIRDKEPT---KLADIYQEELR 135
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R +D+ S+SK+ L IE+ LL++L +L+ K
Sbjct: 136 DLRHQVDQLSNSKARLEIERDNLLEDLNNLRQK 168
>gi|763066|emb|CAA60045.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
gi|324510334|gb|ADY44320.1| Intermediate filament protein A, partial [Ascaris suum]
Length = 610
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRP-GSPLSPTI-ISRRQEKNELKN 65
G++ + TP S S + + E S P G + TI +R +EK E+ +
Sbjct: 48 GSSISMTPFGSMSSGGGRILKTVTEIGSSSIHSSGLSPFGQNAASTIRDTREREKKEMSD 107
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDRLA YIE V+ L+ L L + + V+A E E+++ RK ++ +
Sbjct: 108 LNDRLASYIEKVRFLEAQNRKLAADLDLLRGRWGKDTLSVRAMYEGELQEARKLVNDTNR 167
Query: 126 SKSALAIEKRRLLDELLDLKNK 147
+ L E R+LLDEL + + K
Sbjct: 168 QREELEKEIRKLLDELSEYRRK 189
>gi|351711352|gb|EHB14271.1| Neurofilament light polypeptide [Heterocephalus glaber]
Length = 539
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRSLQ 175
>gi|348578473|ref|XP_003475007.1| PREDICTED: alpha-internexin-like [Cavia porcellus]
Length = 500
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|344274775|ref|XP_003409190.1| PREDICTED: alpha-internexin [Loxodonta africana]
Length = 499
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RDLRTQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|388453259|ref|NP_001253499.1| alpha-internexin [Macaca mulatta]
gi|402881387|ref|XP_003904255.1| PREDICTED: alpha-internexin [Papio anubis]
gi|380817836|gb|AFE80792.1| alpha-internexin [Macaca mulatta]
Length = 499
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|260813215|ref|XP_002601314.1| hypothetical protein BRAFLDRAFT_224304 [Branchiostoma floridae]
gi|229286608|gb|EEN57326.1| hypothetical protein BRAFLDRAFT_224304 [Branchiostoma floridae]
Length = 327
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R QE+ EL LN+R A YIE ++ LQ +LE + ++ + TT KA EKE
Sbjct: 7 ARAQEREELSALNNRFASYIEKMRSLQQRNCTLEAQVLKLQATETT--AHTKALYEKETR 64
Query: 115 DIRKALDRESSSKSALAIEK 134
D+R +D S K+ + +E+
Sbjct: 65 DLRTLVDELSEEKAKMVLER 84
>gi|57107579|ref|XP_543999.1| PREDICTED: alpha-internexin isoform 1 [Canis lupus familiaris]
Length = 500
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|156119330|ref|NP_001095200.1| neurofilament medium polypeptide [Gallus gallus]
gi|128146|sp|P16053.2|NFM_CHICK RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament triplet M protein
gi|63689|emb|CAA34958.1| NF-M protein [Gallus gallus]
Length = 858
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E L ++ + H ++ A E+E+
Sbjct: 91 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQKHAGR-AQLGDAYEQEL 149
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R AL++ S K+ + ++ + +++ L+ +
Sbjct: 150 RELRGALEQVSHEKAQIQLDSEHIEEDIQRLRER 183
>gi|90075636|dbj|BAE87498.1| unnamed protein product [Macaca fascicularis]
Length = 231
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 23 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 81
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 82 LRLAAEDATNEKQALQGEREGLEETLRNLQ 111
>gi|115494964|ref|NP_001069426.1| alpha-internexin [Bos taurus]
gi|122132263|sp|Q08DH7.1|AINX_BOVIN RecName: Full=Alpha-internexin; Short=Alpha-Inx
gi|115304927|gb|AAI23744.1| Internexin neuronal intermediate filament protein, alpha [Bos
taurus]
gi|296472698|tpg|DAA14813.1| TPA: alpha-internexin [Bos taurus]
Length = 499
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R L+ SS+++ +E+ L +E+ L+
Sbjct: 148 RDLRAQLEEASSARAQALLERDGLAEEVQRLR 179
>gi|410976025|ref|XP_003994426.1| PREDICTED: alpha-internexin [Felis catus]
Length = 499
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 88 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 146
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 147 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 180
>gi|395828159|ref|XP_003787253.1| PREDICTED: alpha-internexin [Otolemur garnettii]
Length = 499
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|339265191|ref|XP_003366279.1| intermediate filament protein ifb-1 [Trichinella spiralis]
gi|316958789|gb|EFV47473.1| intermediate filament protein ifb-1 [Trichinella spiralis]
Length = 168
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 10 TPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
T SA +GS R V E P + + + +EK EL+NLNDR
Sbjct: 31 TSGGIGSAGQGSGGRVLKIVTEMGSSTVSGISPAFSANAAQSFLEATEKEKRELQNLNDR 90
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
L+ YI+ V+ L++ L L + + ++K + D R+ +D + K+
Sbjct: 91 LSNYIDRVKGLESQNRKLVSDLEDLRSRWGKDTSEIKEKYAGSLSDARRTIDDMARQKTE 150
Query: 130 LAIEKRRLLDELLDLKNK 147
+ ++ RL D++ + + +
Sbjct: 151 VEVQISRLQDDIAEFRRR 168
>gi|632549|gb|AAA80106.1| NF-180 [Petromyzon marinus]
Length = 1110
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQ--NDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR EK L++LNDR A YIE V L+ N + E S Y ++S V E+E
Sbjct: 96 SRVNEKQLLQDLNDRFAGYIEKVHDLEQKNKELETEISAYRQKQSGPARGGGVSDVYEQE 155
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
I+++R +D + K+ + IE+ L +E+ L+ K
Sbjct: 156 IKELRDVIDDINGEKTTVQIEQEHLDEEIQRLREK 190
>gi|224080825|ref|XP_002197538.1| PREDICTED: neurofilament medium polypeptide [Taeniopygia guttata]
Length = 851
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E L ++ + H ++ A E+E+
Sbjct: 90 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQKHAGR-AQLSDAYEQEL 148
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R AL++ S K+ + ++ + +++ L+ +
Sbjct: 149 RELRGALEQVSHEKAQIQLDSEHIEEDIQRLRER 182
>gi|340376468|ref|XP_003386754.1| PREDICTED: prelamin-A/C-like [Amphimedon queenslandica]
Length = 635
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 35 QPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
Q Q S P P +P +R +EK +L+ LNDR YI V++L+++K L +L +
Sbjct: 3 QQQATSSPSLP----TPERRTRMKEKEDLQLLNDRFVTYINRVRRLRDEKEKLNVTLEHM 58
Query: 95 EESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDL 144
+ + E +K EKE++D R +D + K+ I+ + D + DL
Sbjct: 59 QTTTQEESGAIKRMFEKELQDARLLIDETAKEKARYQIQSSKTEDRIKDL 108
>gi|426253383|ref|XP_004020376.1| PREDICTED: alpha-internexin [Ovis aries]
Length = 461
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 42 PPRP-GSPLSPTI-------ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
PP P G LS I R EK +L+ LNDR A +IE V +L+ +LE L +
Sbjct: 31 PPAPDGLDLSQAAARTNEYKIIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAA 90
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + H E +V ++E+ D+R L+ SS ++ +E+ L +E+ L+
Sbjct: 91 LRQRH-AEPSRVGELFQRELRDLRAQLEEASSGRAQALLERDGLAEEVQRLR 141
>gi|324507108|gb|ADY43020.1| Intermediate filament protein A [Ascaris suum]
Length = 464
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 8 GATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRP-GSPLSPTI-ISRRQEKNELKN 65
G++ + TP S S + + E S P G + TI +R +EK E+ +
Sbjct: 48 GSSISMTPFGSMSSGGGRILKTVTEIGSSSIHSSGLSPFGQNAASTIRDTREREKKEMSD 107
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDRLA YIE V+ L+ L L + + V+A E E+++ RK ++ +
Sbjct: 108 LNDRLASYIEKVRFLEAQNRKLAADLDLLRGRWGKDTLSVRAMYEGELQEARKLVNDTNR 167
Query: 126 SKSALAIEKRRLLDEL 141
+ L E R+LLDEL
Sbjct: 168 QREELEKEIRKLLDEL 183
>gi|296221128|ref|XP_002756614.1| PREDICTED: alpha-internexin [Callithrix jacchus]
Length = 499
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 90 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 148
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R L+ SS+++ +E+ L +E+ L+
Sbjct: 149 RDLRAQLEEASSARAQALLERDGLAEEVQRLR 180
>gi|395842533|ref|XP_003794072.1| PREDICTED: neurofilament light polypeptide [Otolemur garnettii]
Length = 379
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + ++ K AL E+ L
Sbjct: 146 LRLAAEDATNEKQALQGEREGL 167
>gi|339243637|ref|XP_003377744.1| intermediate filament protein ifa-1 [Trichinella spiralis]
gi|316973417|gb|EFV57011.1| intermediate filament protein ifa-1 [Trichinella spiralis]
Length = 644
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 10 TPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTII-SRRQEKNELKNLND 68
T TP+ G+ R V E P + + I+ SR +EK E+++LND
Sbjct: 83 TIGGTPTGV-GAGGRVLKIVTEMGSSSVSGFSPGFHQAGAASAILESREREKKEMQDLND 141
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ L L + + VK E E+ + RK +D + +K+
Sbjct: 142 RLASYIEKVRFLEAQNRKLANDLEGLRGRWGKDTSSVKQMYEGELAEARKLIDDTAKNKA 201
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + RL +L + + K
Sbjct: 202 TLESQINRLQTDLAEFRRK 220
>gi|29420781|dbj|BAC66612.1| intermediate filament protein [Dugesia japonica]
Length = 568
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 17 ASRGSSSRQTSEVREEPP--------QPQPQSQPPRPGSP-----LSPTIISRRQEKNEL 63
ASR ++SR T + + P Q + P GS +S + R +EK ++
Sbjct: 2 ASR-TTSRSTVTINKSNPATKEYEMRQSYNMNASPFAGSGQIHNNVSTAVEGREREKRDM 60
Query: 64 KNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRE 123
++LN+RLA YIE V+ L+ L L ++ E E +K++ E E++ ++K LD
Sbjct: 61 QDLNERLANYIEKVRFLEAQNKKLNNELNTLRERWGKEAEKIRILYEIEMDQLKKLLDEA 120
Query: 124 SSSKSAL 130
+++S L
Sbjct: 121 EAARSEL 127
>gi|633240|emb|CAA58705.1| intermediate filament protein [Lumbricus terrestris]
Length = 596
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 34 PQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
P P + + ++ SR QEK ++++LN+RLA YIE V+ L+ L L
Sbjct: 58 PAMSPNAYVTMSNTGVTAVKESREQEKKDMQDLNERLANYIEKVRFLEAQNRKLADELLK 117
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE---KRRLLDEL 141
++ E ++KA + E+++ R+ LD KS + I ++DEL
Sbjct: 118 LKAKWGKETSQIKAMYQAELDEARRLLDDAVKEKSRMEIRLASNEEMMDEL 168
>gi|431921656|gb|ELK19008.1| Keratin, type II cytoskeletal 75 [Pteropus alecto]
Length = 1103
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K+LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 717 RKEEKEQIKSLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRANIEPMFEAYINN 775
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD ++ L +E + + D + D KNK
Sbjct: 776 LRRQLDSLGGERARLEMELKNMQDVVEDFKNK 807
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKV 105
+ PTI R++E+ ++K LN++ A +I+ V+ L+ LE +SL + S T + +
Sbjct: 188 IDPTIQRIRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGSKTVR-QNL 246
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ + + D+R+ LD ++ L E R + D + D K K
Sbjct: 247 EPFFDAYLNDLRRQLDNVTTESGRLDAELRNMQDVVEDFKVK 288
>gi|193786724|dbj|BAG52047.1| unnamed protein product [Homo sapiens]
Length = 543
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERAHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|32452103|emb|CAD38125.1| keratin type IIs [Acipenser baerii]
Length = 459
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K LN+R A +I+ V+ L+ LE + +++ + TT + A
Sbjct: 83 IDPNIQVIRSQEKEQIKGLNNRFASFIDKVRFLEQQNKMLE-TKWNLMQGQTTTKSNINA 141
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ I ++R+ LD ++ KS L E R + + D K K
Sbjct: 142 MFEEYIANLRRQLDAINNDKSKLDSELRNMQGAVEDFKGK 181
>gi|291232460|ref|XP_002736176.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 803
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKL-----QNDKASLEYSLYSIEESHTTEFKKVKAA 108
++R QEK EL LNDR + YI V+KL Q+D ++L S+ ++EE E +KA
Sbjct: 13 MTRHQEKTELSLLNDRYSDYIAKVRKLQQEANQDDSSALLNSIRNLEE----EINSIKAL 68
Query: 109 SEKEIEDIRKALDRESSSKSALAI 132
+ E++ +R+ L+ +S K L +
Sbjct: 69 YDNELDKLRRELEGVTSEKQRLEL 92
>gi|4584819|emb|CAB40818.1| intermediate filament [Myxicola infundibulum]
Length = 456
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A YIE V L+ LE L +++ E +K E E+
Sbjct: 78 IIRSNEKEQLQGLNDRFANYIEKVHFLEAQNRKLEAELATLKSKWGKETSNIKEMYETEL 137
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ RK LD + K + + L + L DL+ +
Sbjct: 138 EEARKLLDADVKEKITMEVRVASLQEMLEDLRKR 171
>gi|149579223|ref|XP_001517754.1| PREDICTED: desmin-like, partial [Ornithorhynchus anatinus]
Length = 200
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
Query: 1 MSGRSKRGATPAKTPS------ASRGSSSRQTSEVREE-----------------PPQPQ 37
SGR G +P +PS S+GS+S TS V + PP+
Sbjct: 24 FSGRFS-GGSPLGSPSFPRASFGSKGSASSMTSRVYQVSRSSGGAGGVGGLRAGGPPRGI 82
Query: 38 PQSQPPRP---GSPLSPTII---------SRRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
P+S G L ++ +R EK EL+ LNDR A YIE V+ L+ A
Sbjct: 83 PRSSAAGAYGAGELLDFSLADAVNQEFLATRTNEKAELQELNDRFANYIEKVRFLEQQNA 142
Query: 86 SLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+L + ++ T +V E+E+ ++R+ ++ ++ ++ + +E+ LLD+L LK
Sbjct: 143 ALAAEVSRLKGREPT---RVAEIYEEELRELRRQVEVLTNQRARVDLERDNLLDDLQRLK 199
>gi|301756212|ref|XP_002913941.1| PREDICTED: alpha-internexin-like [Ailuropoda melanoleuca]
gi|281352080|gb|EFB27664.1| hypothetical protein PANDA_001792 [Ailuropoda melanoleuca]
Length = 496
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-----GVGELFQREL 143
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 144 RDLRAQLEEASSARAQALLERDGLAEEVQRLRAR 177
>gi|339251730|ref|XP_003372887.1| muscle cell intermediate filament protein OV71 [Trichinella spiralis]
gi|316968734|gb|EFV52969.1| muscle cell intermediate filament protein OV71 [Trichinella spiralis]
Length = 1640
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 10 TPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
T SA +GS R V E P + + + +EK EL+NLNDR
Sbjct: 1170 TSGGIGSAGQGSGGRVLKIVTEMGSSTVSGISPAFSANAAQSFLEATEKEKRELQNLNDR 1229
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
L+ YI+ V+ L++ L L + + ++K + D R+ +D + K+
Sbjct: 1230 LSNYIDRVKGLESQNRKLVSDLEDLRSRWGKDTSEIKEKYAGSLSDARRTIDDMARQKTE 1289
Query: 130 LAIEKRRLLDELLDLKNK 147
+ ++ RL D++ + + +
Sbjct: 1290 VEVQISRLQDDIAEFRRR 1307
>gi|363742075|ref|XP_003642593.1| PREDICTED: neurofilament light polypeptide [Gallus gallus]
Length = 500
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|47201091|emb|CAF87997.1| unnamed protein product [Tetraodon nigroviridis]
Length = 43
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKL 80
+PLSPT I+R QEK++L++LNDRLA YI+ V++
Sbjct: 4 TPLSPTRITRLQEKHDLQHLNDRLAVYIDRVRRW 37
>gi|395741978|ref|XP_003777673.1| PREDICTED: alpha-internexin isoform 2 [Pongo abelii]
Length = 445
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDEL 141
D+R L+ SS K LLDEL
Sbjct: 148 RDLRAQLEEASSEKKV-----ESLLDEL 170
>gi|224080823|ref|XP_002197486.1| PREDICTED: neurofilament light polypeptide [Taeniopygia guttata]
Length = 559
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 89 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 147
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 148 LRLAAEEATSEKQALQGERESL 169
>gi|50759528|ref|XP_417679.1| PREDICTED: neurofilament light polypeptide isoform 2 [Gallus
gallus]
Length = 556
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|462703|sp|Q02916.3|NFL_COTJA RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=Neurofilament triplet L protein
gi|222943|dbj|BAA02504.1| neurofilament-L [Coturnix coturnix]
Length = 556
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|118101327|ref|XP_001232615.1| PREDICTED: neurofilament light polypeptide isoform 1 [Gallus
gallus]
Length = 483
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|326932686|ref|XP_003212445.1| PREDICTED: neurofilament light polypeptide-like isoform 3
[Meleagris gallopavo]
Length = 500
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|71726729|gb|AAZ39528.1| intermediate filament protein [Biomphalaria glabrata]
Length = 582
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E++NLN+RLA YIE V L LE ++ + + ++ A E E+
Sbjct: 72 NREKEKREMQNLNERLASYIEKVHFLDAQVKKLEAENEALRNRKVEDLQPIRDAYENELR 131
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
RK +D SS+K + LLDE+ L+
Sbjct: 132 QARKVIDELSSTKGVAEAKLAGLLDEIASLR 162
>gi|326932682|ref|XP_003212443.1| PREDICTED: neurofilament light polypeptide-like isoform 1
[Meleagris gallopavo]
Length = 556
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|4468706|emb|CAB38182.1| intermediate filament protein IF1 [Sagitta elegans]
Length = 650
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 50 SPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK----V 105
+ I R +EK +L++LNDR A YIE V+ L+ D L+ SI ++ +F++ +
Sbjct: 102 TAVIAQREREKRDLQDLNDRFASYIERVRFLEADNKRLQ----SIIDTLKVKFEQLEVTL 157
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
K E E+ RK +D + +K+ + + RL +EL D + K
Sbjct: 158 KEMYEAELAAARKTIDETTKAKAEVELRVARLEEELADYRMK 199
>gi|326932684|ref|XP_003212444.1| PREDICTED: neurofilament light polypeptide-like isoform 2
[Meleagris gallopavo]
Length = 483
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|422665|pir||B46024 neurofilament-L subunit - quail
Length = 556
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSALAIEKRRL 137
+R A + +S K AL E+ L
Sbjct: 147 LRLAAEEATSEKQALQGERESL 168
>gi|226441987|gb|ACO57583.1| type II keratin E3, partial [Gillichthys seta]
Length = 297
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 48 PLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ P I I R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ + TT +
Sbjct: 4 DIDPNIQIVRSQEKEQMKSLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTSRSNID 62
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
A E I ++R+ LD + K L E R + + D KNK
Sbjct: 63 AMFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKNK 103
>gi|508538|gb|AAA62617.1| alpha-internexin [Mus musculus]
Length = 504
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAEALLERDGLAEEVQRLRAR 181
>gi|403260164|ref|XP_003922552.1| PREDICTED: alpha-internexin [Saimiri boliviensis boliviensis]
Length = 439
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSA---------LAIEKR--RLLDEL 141
D+R L+ SS+++ L +EK+ LLDEL
Sbjct: 148 RDLRAQLEEASSARAQALLEXXXXRLDLEKKVESLLDEL 186
>gi|395502173|ref|XP_003755458.1| PREDICTED: alpha-internexin [Sarcophilus harrisii]
Length = 496
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 86 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 144
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R L+ SS+++ +E+ L +E+ L+
Sbjct: 145 RELRAQLEEASSARTQALLERDGLAEEVQRLR 176
>gi|94730353|sp|P46660.2|AINX_MOUSE RecName: Full=Alpha-internexin; Short=Alpha-Inx; AltName: Full=66
kDa neurofilament protein; Short=NF-66;
Short=Neurofilament-66
Length = 504
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|148539957|ref|NP_666212.3| alpha-internexin [Mus musculus]
gi|17390900|gb|AAH18383.1| Ina protein [Mus musculus]
Length = 501
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|449267696|gb|EMC78609.1| Neurofilament light polypeptide, partial [Columba livia]
Length = 464
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ LE L + + H E + +A E+EI +
Sbjct: 32 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKH-AEPSRFRALYEQEIRE 90
Query: 116 IRKALDRESSSKSALAIEKRR-------------LLDELLDLK 145
+R A + +S K AL E+ LLDEL LK
Sbjct: 91 LRLAAEEATSEKQALQGERENLEETLRGLQARYDLLDELAFLK 133
>gi|335955212|gb|AEH76612.1| simple type II keratin K8b [Epinephelus bruneus]
Length = 220
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK ++K LN+R A +I+ V+ L+ LE + +++ + TT + A
Sbjct: 107 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWNLLQGQTTTRSNIDA 165
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 166 MFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 205
>gi|334362277|gb|AEG78338.1| keratin type II [Epinephelus coioides]
Length = 241
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 47 SPLS----PTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
+PLS PTI R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT
Sbjct: 87 APLSLEIDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTT 145
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ A E I ++R+ LD + K L E R + + D K K
Sbjct: 146 RSNIDAMFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKRK 191
>gi|226441985|gb|ACO57582.1| type II keratin E3, partial [Gillichthys mirabilis]
Length = 297
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 48 PLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ P I I R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ + TT +
Sbjct: 4 DIDPNIQIVRSQEKEQMKSLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTSRSNID 62
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
A E I ++R+ LD + K L E R + + D KNK
Sbjct: 63 AMFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKNK 103
>gi|221307553|ref|NP_001138256.1| internexin neuronal intermediate filament protein, alpha [Danio
rerio]
Length = 474
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V+ L+ LE L S+ + E ++ ++EI
Sbjct: 89 IVRTNEKEQLQGLNDRFAMFIEKVRNLEQHNKVLETELVSLRQRQ-NEPSRLAELYQQEI 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R +D ++ KS + IE+ + ++L L+ K
Sbjct: 148 RDLRAQVDELNNEKSHILIERDSIEEDLQKLRGK 181
>gi|387492|gb|AAA39810.1| neurofilament protein (AA at 517), partial [Mus musculus]
Length = 543
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LN R A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNHRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R A + ++ K AL E+ L + L +L+
Sbjct: 146 LRLAAEDATNEKQALQGEREGLEETLRNLQ 175
>gi|9506811|ref|NP_062001.1| alpha-internexin [Rattus norvegicus]
gi|1703221|sp|P23565.2|AINX_RAT RecName: Full=Alpha-internexin; Short=Alpha-Inx
gi|204964|gb|AAA41444.1| alpha-internexin [Rattus norvegicus]
Length = 505
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|387493|gb|AAA39813.1| neurofilament largest subunit, partial [Mus musculus]
Length = 1087
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS---- 109
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +K +AA
Sbjct: 89 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQ------QKGRAAMGELY 142
Query: 110 EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 143 EREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 180
>gi|55622|emb|CAA36264.1| alpha-internexin [Rattus norvegicus]
Length = 500
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRGELEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|149040328|gb|EDL94366.1| internexin, alpha [Rattus norvegicus]
Length = 506
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|334314212|ref|XP_001369078.2| PREDICTED: alpha-internexin [Monodelphis domestica]
Length = 496
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 87 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 145
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R L+ SS+++ +E+ L +E+ L+
Sbjct: 146 RELRAQLEEASSARTQALLERDGLAEEVQRLR 177
>gi|47226684|emb|CAG07843.1| unnamed protein product [Tetraodon nigroviridis]
Length = 368
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
SQPP S +RR EK L+ LNDR A YI+ V+ L+ +LE ++ ++
Sbjct: 38 SQPPSFDPDASKDDTTRRTEKEMLQTLNDRFAGYIDKVRYLETHNRNLEAEAEALRQNRA 97
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDL 144
V E+E+E++R L + + K+ LA+E L D + L
Sbjct: 98 GR-ASVDEQYERELEELRGLLVQLTGEKAGLALEHDHLEDSIHQL 141
>gi|432864497|ref|XP_004070323.1| PREDICTED: intermediate filament protein ON3-like isoform 2
[Oryzias latipes]
Length = 564
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK+++KNLN+R A I+ V+ L+ L+ + +S+ + TT + A
Sbjct: 149 IDPNIQIVRSQEKDQIKNLNNRFASLIDKVRFLEQQNKMLD-TKWSLLQDQTTSRSNIDA 207
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K+ L E R + + D K K
Sbjct: 208 MFEAYIANLRRQLDGLGNEKNKLEGELRNMQGSVEDFKKK 247
>gi|161292|gb|AAA29991.1| neurofilament protein [Doryteuthis pealeii]
Length = 1200
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R +EK ++++LN+R A YIE V+ L+ L L ++ E +K E E+E+
Sbjct: 93 REREKQDMRDLNERFANYIEKVRFLEAQNKKLAGELEELKSKWGKETSAIKEMYETELEE 152
Query: 116 IRKALDRESSSKSALAIEKRRLLDEL 141
RK +D + K L + L+D+L
Sbjct: 153 ARKLIDATNKEKITLDVRVTELIDQL 178
>gi|350593043|ref|XP_001929355.3| PREDICTED: alpha-internexin [Sus scrofa]
Length = 499
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|784941|emb|CAA60047.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
gi|324505092|gb|ADY42193.1| Intermediate filament protein B [Ascaris suum]
Length = 589
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 10 TPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
+ A + A G R V E P + + + +EK E++ LNDR
Sbjct: 32 SGAYSTGAVSGGGGRVLKMVTEMGSASIGGISPALSANAAKSFLEATDKEKKEMQGLNDR 91
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
L YI+ V+KL+ L L + + ++K + D RK +D + K+
Sbjct: 92 LGNYIDRVKKLEEQNRKLVADLDELRGRWGKDTSEIKIQYSDSLRDARKEIDDGARRKAE 151
Query: 130 LAIEKRRLLDELLDLKNK 147
+ ++ RL D+L +L+N+
Sbjct: 152 IDVKVARLRDDLAELRNR 169
>gi|268578035|ref|XP_002644000.1| C. briggsae CBR-IFA-1 protein [Caenorhabditis briggsae]
Length = 566
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 46 GSPLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
GS + TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++ +
Sbjct: 46 GSNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHN 105
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++ E E+ D +K +D + + + + +++ DEL +L+ K
Sbjct: 106 IRNMYEGELSDAQKLIDDTNKQRKDMESQIKKMQDELAELRRK 148
>gi|124235|sp|P23731.1|IFEB_ASCSU RecName: Full=Intermediate filament protein B; Short=IF-B
gi|102571|pir||S06954 intermediate filament protein B - common roundworm
Length = 589
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 10 TPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDR 69
+ A + A G R V E P + + + +EK E++ LNDR
Sbjct: 32 SGAYSTGAVSGGGGRVLKMVTEMGSASIGGISPALSANAAKSFLEATDKEKKEMQGLNDR 91
Query: 70 LAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSA 129
L YI+ V+KL+ L L + + ++K + D RK +D + K+
Sbjct: 92 LGNYIDRVKKLEEQNRKLVADLDELRGRWGKDTSEIKIQYSDSLRDARKEIDDGARRKAE 151
Query: 130 LAIEKRRLLDELLDLKNK 147
+ ++ RL D+L +L+N+
Sbjct: 152 IDVKVARLRDDLAELRNR 169
>gi|402585603|gb|EJW79542.1| intermediate filament protein, partial [Wuchereria bancrofti]
Length = 354
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ +LNDRLA YIE V+ L+ L L + + V+A E E++
Sbjct: 72 TREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLNLLRGRWGKDSVSVRAMYEGELQ 131
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
+ RK +D +S + L R+L+D+L
Sbjct: 132 EARKIIDDTNSEREDLEKRIRKLMDDL 158
>gi|57335406|emb|CAH05051.1| type III desmin [Protopterus aethiopicus]
Length = 453
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
I +R EK EL+ LNDR A YIE V+ L+ A L + +E E ++ E++
Sbjct: 86 IQTRTNEKAELQELNDRFANYIEKVRFLEQQNALL---VAEVERLKAKEPTRIGELYEQQ 142
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ D+R+ ++ +S ++ + +E+ L D+L LK +
Sbjct: 143 MRDLRREVEIVTSQRARVEVERDNLFDDLQKLKQR 177
>gi|301778863|ref|XP_002924853.1| PREDICTED: desmin-like [Ailuropoda melanoleuca]
Length = 522
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 154 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 210
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 211 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 245
>gi|138519820|gb|AAI35569.1| ina protein [Xenopus (Silurana) tropicalis]
gi|170285099|gb|AAI61014.1| ina protein [Xenopus (Silurana) tropicalis]
Length = 487
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V L+ LE L ++ + +E ++ ++EI
Sbjct: 83 IIRTNEKEQLQGLNDRFAMFIEKVHNLEQQNKVLETELTALRQRQ-SEPSRLGELYQQEI 141
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+++R L+ ++ K+ + IE+ L D+L LK K
Sbjct: 142 KELRAQLEELNAEKAQIIIERDNLEDDLQKLKGK 175
>gi|119580208|gb|EAW59804.1| neurofilament, heavy polypeptide 200kDa, isoform CRA_a [Homo
sapiens]
Length = 309
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGR-SAMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|190402244|gb|ACE77656.1| desmin (predicted) [Sorex araneus]
Length = 469
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAVLAAEVNRLKGREPT---RVAEMYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ +D ++ ++ + +E+ LLD+L LK K
Sbjct: 158 LRELRRQVDVLTNQRARVDLERDNLLDDLQRLKAK 192
>gi|432864495|ref|XP_004070322.1| PREDICTED: intermediate filament protein ON3-like isoform 1
[Oryzias latipes]
Length = 557
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK+++KNLN+R A I+ V+ L+ L+ + +S+ + TT + A
Sbjct: 149 IDPNIQIVRSQEKDQIKNLNNRFASLIDKVRFLEQQNKMLD-TKWSLLQDQTTSRSNIDA 207
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K+ L E R + + D K K
Sbjct: 208 MFEAYIANLRRQLDGLGNEKNKLEGELRNMQGSVEDFKKK 247
>gi|2959454|dbj|BAA25134.1| desmin [Sus scrofa]
Length = 462
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 94 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 150
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 151 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 185
>gi|325185372|emb|CCA19858.1| laminlike protein putative [Albugo laibachii Nc14]
Length = 685
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
P S SP R EK L++LN RL Y+ V+++++ K E L +I + +
Sbjct: 2 PSSQFSPIKSKRLDEKASLQSLNSRLEIYVMRVKEMEDAKTVAERELETIRDRMQQDMDV 61
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAI 132
V+ KE++D RK LD E K+ L I
Sbjct: 62 VRLRLTKELDDTRKKLDHELDQKTRLQI 89
>gi|48374063|ref|NP_001001535.1| desmin [Sus scrofa]
gi|6166115|sp|P02540.4|DESM_PIG RecName: Full=Desmin
gi|5669873|gb|AAD46492.1|AF136188_1 desmin [Sus scrofa]
gi|13959069|gb|AAK51087.1|AF363284_1 muscle-specific intermediate filament desmin [Sus scrofa]
Length = 471
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 103 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 159
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 160 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 194
>gi|44890667|gb|AAH66728.1| Krt4 protein [Danio rerio]
Length = 497
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 103 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQEQTTTRSNIDA 161
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + + D KNK
Sbjct: 162 MFEAYISNLRRQLDGLGNEKMKLEGELKNMQGLVEDFKNK 201
>gi|354832335|gb|AER42657.1| keratin type II E3 [Epinephelus coioides]
Length = 471
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 47 SPLS----PTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
+PLS PTI R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT
Sbjct: 87 APLSLEIDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTT 145
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ A E I ++R+ LD + K L E R + + D K K
Sbjct: 146 RSNIDAMFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKRK 191
>gi|449275361|gb|EMC84233.1| Desmin, partial [Columba livia]
Length = 263
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YIE V+ L+ A + + + E +V E+E+
Sbjct: 101 TRTNEKVELQELNDRFANYIEKVRFLEQQNALM---VAEVNRLRGKEPTRVAEMYEEELR 157
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D + ++ + +E+ LLD+L LK +
Sbjct: 158 ELRRQVDALTGQRARVEVERDNLLDDLQKLKQR 190
>gi|348508096|ref|XP_003441591.1| PREDICTED: intermediate filament protein ON3-like [Oreochromis
niloticus]
Length = 447
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI + R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ + TT +
Sbjct: 79 IDPTIQAVRTQEKEQIKSLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQQQTTTRSNIDG 137
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E R + + D KNK
Sbjct: 138 MFEAYISNLRRQLDGLGNEKVKLESELRNMQGLVEDFKNK 177
>gi|444521930|gb|ELV13251.1| Keratin, type II cytoskeletal 75 [Tupaia chinensis]
Length = 481
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +SI + H T ++ E I +
Sbjct: 136 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSILQDHKTTRANIEPMFEAYINN 194
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + L +E + + D + D KNK
Sbjct: 195 LRRQLDCLGGERGRLEMELKSMQDVVEDFKNK 226
>gi|119580210|gb|EAW59806.1| neurofilament, heavy polypeptide 200kDa, isoform CRA_c [Homo
sapiens]
Length = 587
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGR-SAMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|301606011|ref|XP_002932628.1| PREDICTED: neurofilament light polypeptide [Xenopus (Silurana)
tropicalis]
Length = 624
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R QEK +L++LNDR A +IE V +L+ LE L + + H E +++ E+E+
Sbjct: 151 IVRTQEKAQLQDLNDRFANFIERVHELEQRNKVLEAELLLLRQKH-NEPSRLRDLYEQEV 209
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R A + + + + E+ RL D L L+ +
Sbjct: 210 RELRLAQEEATGDRQTMRNERERLEDALRLLQGR 243
>gi|301614741|ref|XP_002936847.1| PREDICTED: alpha-internexin-like [Xenopus (Silurana) tropicalis]
Length = 440
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V L+ LE L ++ + +E ++ ++EI
Sbjct: 105 IIRTNEKEQLQGLNDRFAMFIEKVHNLEQQNKVLETELTALRQRQ-SEPSRLGELYQQEI 163
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+++R L+ ++ K+ + IE+ L D+L LK K
Sbjct: 164 KELRAQLEELNAEKAQIIIERDNLEDDLQKLKGK 197
>gi|28972433|dbj|BAC65670.1| mKIAA0845 protein [Mus musculus]
Length = 1046
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+
Sbjct: 100 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMGELYEREV 158
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 159 REMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 192
>gi|124286811|ref|NP_035034.2| neurofilament heavy polypeptide [Mus musculus]
gi|94730399|sp|P19246.3|NFH_MOUSE RecName: Full=Neurofilament heavy polypeptide; Short=NF-H; AltName:
Full=200 kDa neurofilament protein; AltName:
Full=Neurofilament triplet H protein
gi|195934791|gb|AAI68406.1| Neurofilament, heavy polypeptide [synthetic construct]
Length = 1090
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+
Sbjct: 90 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMGELYEREV 148
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 REMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 182
>gi|443719773|gb|ELU09783.1| hypothetical protein CAPTEDRAFT_220856 [Capitella teleta]
Length = 556
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIE-ESHTTEFKKVKAASEKE 112
IS +E+ +++ LNDRLA ++ ++++Q + ++ S Y ++ E K+K+ + E
Sbjct: 54 ISANEERRDMQGLNDRLASFLNRLRQMQANAGQMDTSAYHAAIKNLEDEIAKLKSMYDAE 113
Query: 113 IEDIRKALDRESSSKSALA--IEKRRLLDELLDLKNK 147
++ +R+ALD+ + K+ LA EK +L + +L+NK
Sbjct: 114 LDRLRRALDQCNMDKNNLAANAEKNAML--IAELQNK 148
>gi|200022|gb|AAA39809.1| neurofilament protein [Mus musculus]
gi|226537|prf||1601423A neurofilament protein NF-H
Length = 1072
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 88 AAVAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMGELYER 146
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 147 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 182
>gi|50979202|ref|NP_001003352.1| neurofilament heavy polypeptide [Canis lupus familiaris]
gi|24020878|gb|AAN40837.1|AF346625_1 heavy neurofilament protein [Canis lupus familiaris]
Length = 1135
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS----EKE 112
R EK +L+ LNDR A YI+ V++L+ SLE ++ + H +AA E+E
Sbjct: 92 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQHAG-----RAAMGELYERE 146
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 147 VREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 181
>gi|25149995|ref|NP_741903.1| Protein IFA-1, isoform b [Caenorhabditis elegans]
gi|22265780|emb|CAD44129.1| Protein IFA-1, isoform b [Caenorhabditis elegans]
Length = 575
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 47 AGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 106
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E+ D +K +D + + + + +++ DEL +++ K
Sbjct: 107 KWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRK 157
>gi|326922888|ref|XP_003207675.1| PREDICTED: desmin-like [Meleagris gallopavo]
Length = 428
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YIE V+ L+ A + + + E +V E+E+
Sbjct: 127 TRTNEKVELQELNDRFANYIEKVRFLEQQNALM---VAEVNRLRGKEPTRVAEMYEEELR 183
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D + ++ + +E+ LLD+L LK +
Sbjct: 184 ELRRQVDALTGQRARVEVERDNLLDDLQKLKQR 216
>gi|463250|emb|CAA83229.1| Neurofilament protein, high molecular weight subunit (NF-H) [Mus
musculus]
Length = 1071
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 87 AAVAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMGELYER 145
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 146 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 181
>gi|355683670|gb|AER97159.1| desmin [Mustela putorius furo]
Length = 468
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 158 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 192
>gi|161612220|gb|AAI55775.1| Krt4 protein [Danio rerio]
Length = 497
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 103 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQEQTTTRSNIDA 161
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + + D KNK
Sbjct: 162 MFEAYISNLRRQLDGLGNEKMKLEGELKNMQGLVEDFKNK 201
>gi|126158909|ref|NP_001075044.1| desmin [Bos taurus]
gi|426221609|ref|XP_004005001.1| PREDICTED: desmin [Ovis aries]
gi|6166114|sp|O62654.3|DESM_BOVIN RecName: Full=Desmin
gi|124829228|gb|AAI33411.1| Desmin [Bos taurus]
gi|296490271|tpg|DAA32384.1| TPA: desmin [Bos taurus]
Length = 470
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 102 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 158
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 159 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 193
>gi|556343|gb|AAC41561.1| intermediate filament protein [Onchocerca volvulus]
gi|914120|gb|AAB34380.1| OVIF [Onchocerca volvulus]
Length = 613
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ +LND LA YIE V+ L+ A L L + + V+ E E++
Sbjct: 101 TREREKKEMSDLNDALASYIEKVRFLEAQNAKLAADLNLLRSRWGKDSVNVRTMYESELQ 160
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
+ RK +D ++ + L R+L+DEL
Sbjct: 161 EARKIIDDTNNEREDLEKRIRKLIDEL 187
>gi|2959452|dbj|BAA25133.1| desmin [Bos taurus]
Length = 461
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 93 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 149
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 150 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 184
>gi|410906283|ref|XP_003966621.1| PREDICTED: desmin-like [Takifugu rubripes]
Length = 473
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASE 110
+ +R EK EL++LNDR A YIE V+ L QN ++E +E E +V E
Sbjct: 104 LTTRTNEKAELQHLNDRFASYIEKVRFLEQQNQGLTVE-----VERLRGREPTRVSDMYE 158
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+E+ D+R+ ++ ++ +S + +E+ L D+L LK
Sbjct: 159 EEMNDLRRQVEILTNQRSHIEVERDNLADDLDKLK 193
>gi|391330997|ref|XP_003739937.1| PREDICTED: ATP-dependent RNA helicase DRS1-like [Metaseiulus
occidentalis]
Length = 972
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRES 124
+LA YIE V +LQ + L S IEE TTE K +K +KEIE +RK D E+
Sbjct: 453 KLAAYIEHVNELQGENQRLTLSKRRIEEKSTTEIKTLKGTFQKEIEALRKLADEEA 508
>gi|281344259|gb|EFB19843.1| hypothetical protein PANDA_014252 [Ailuropoda melanoleuca]
Length = 451
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 83 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 139
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 140 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 174
>gi|194211344|ref|XP_001492052.2| PREDICTED: desmin-like [Equus caballus]
Length = 469
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 158 LRELRRQVEVLTNQRARVEVERDNLLDDLQRLKAK 192
>gi|59958381|ref|NP_001012394.1| desmin [Canis lupus familiaris]
gi|62286518|sp|Q5XFN2.3|DESM_CANFA RecName: Full=Desmin
gi|53851036|tpg|DAA05325.1| TPA_exp: desmin [Canis familiaris]
Length = 469
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 158 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 192
>gi|47226295|emb|CAG09263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 683
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEF-KKVKAASEKEI 113
+R EK EL++LNDR A YIE V+ L+ A+L IE+ T E +V E+E+
Sbjct: 310 TRTNEKAELQHLNDRFASYIEKVRFLEQQNAAL---TVEIEKLRTREGPGRVAEMYEEEM 366
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R+ ++ S+ ++ + +E+ L D+L LK
Sbjct: 367 RELRRQIEALSNQRARVEVERDNLADDLQKLK 398
>gi|133901976|ref|NP_001076764.1| Protein IFA-1, isoform c [Caenorhabditis elegans]
gi|112982597|emb|CAL36494.1| Protein IFA-1, isoform c [Caenorhabditis elegans]
Length = 567
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 39 AGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 98
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E+ D +K +D + + + + +++ DEL +++ K
Sbjct: 99 KWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRK 149
>gi|25149990|ref|NP_741902.1| Protein IFA-1, isoform a [Caenorhabditis elegans]
gi|46576376|sp|P90901.2|IFA1_CAEEL RecName: Full=Intermediate filament protein ifa-1; AltName:
Full=Cel IF A1; AltName: Full=Intermediate filament
protein A1; Short=IF-A1
gi|22265779|emb|CAA90365.3| Protein IFA-1, isoform a [Caenorhabditis elegans]
Length = 575
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 47 AGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 106
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E+ D +K +D + + + + +++ DEL +++ K
Sbjct: 107 KWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRK 157
>gi|4468708|emb|CAB38183.1| intermediate filament protein IF2 [Sagitta elegans]
Length = 526
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 50 SPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK----V 105
+ I R +EK +L+ LNDR A YIE V+ L+ D L+ SI + +F+K +
Sbjct: 90 TAVIAQREREKRDLQELNDRFASYIERVRFLEADNKRLQ----SIIDVLKVKFEKLEETL 145
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
K E E++ RK +D + +K+ + ++ RL +EL D +
Sbjct: 146 KEMYEAELDQARKTIDETTKAKAEVELKVARLEEELADYR 185
>gi|197725759|gb|ACH73075.1| keratin 8 [Epinephelus coioides]
Length = 247
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK ++K LN+R A +I+ V+ L+ LE + +++ + TT + A
Sbjct: 104 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWNLLQGQTTTRSNIDA 162
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 163 MFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 202
>gi|392927298|ref|NP_001257139.1| Protein IFA-1, isoform d [Caenorhabditis elegans]
gi|313006888|emb|CBI83234.1| Protein IFA-1, isoform d [Caenorhabditis elegans]
Length = 592
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 64 AGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 123
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E+ D +K +D + + + + +++ DEL +++ K
Sbjct: 124 KWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRK 174
>gi|158341642|ref|NP_036739.2| neurofilament heavy polypeptide [Rattus norvegicus]
Length = 1064
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+
Sbjct: 92 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMGELYEREV 150
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 151 REMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|1279504|emb|CAA29097.1| NF-L [Homo sapiens]
Length = 544
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 86 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 144
Query: 116 IRKA 119
+R A
Sbjct: 145 LRLA 148
>gi|410969488|ref|XP_003991227.1| PREDICTED: desmin [Felis catus]
Length = 472
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 104 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 160
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 161 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 195
>gi|391348706|ref|XP_003748585.1| PREDICTED: prelamin-A/C-like [Metaseiulus occidentalis]
Length = 578
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK++L LN RLA YI V +LQ++ L +L +E+ T E VK + K++E +R
Sbjct: 53 EKHQLSRLNSRLASYIHRVNELQHENQHLHETLRRVEKKTTIETTSVKNSFHKQVETLRG 112
Query: 119 ALDRES 124
+ E+
Sbjct: 113 VISDEA 118
>gi|3676232|emb|CAA75347.1| desmin [Scyliorhinus stellaris]
gi|17221342|emb|CAC83054.1| desmin [Scyliorhinus stellaris]
Length = 455
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+++LNDR A YIE V+ L+ L + + E +V E+E+
Sbjct: 88 TRTNEKAEMQHLNDRFASYIEKVRFLEQQNKVL---VAEVNRLKGQEPGRVNDLYEQEMR 144
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R+ +D ++ K + +E+ L D+LL LK +
Sbjct: 145 DLRRQVDALTNEKVRVEVERDNLADDLLKLKQR 177
>gi|193785349|dbj|BAG54502.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ LE L + + H +E + +A E+EI D
Sbjct: 41 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKH-SEPSRFRALYEQEIRD 99
Query: 116 IRKA 119
+R A
Sbjct: 100 LRLA 103
>gi|89114118|gb|ABD61650.1| neurofilament subunit NF-95 [Petromyzon marinus]
Length = 613
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQ--NDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR EK L++LNDR A YIE V L+ N + E S Y ++S V E+E
Sbjct: 96 SRVNEKQLLQDLNDRFAGYIEKVHDLEQKNKELETEISAYRQKQSGPARGGGVSDVYEQE 155
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
I+++R+ ++ + K+ + IE+ L +E+ L+ K
Sbjct: 156 IKELRELIEHINGEKTTVQIEQEHLDEEIQRLREK 190
>gi|126308002|ref|XP_001367834.1| PREDICTED: keratin, type I cytoskeletal 17-like [Monodelphis
domestica]
Length = 682
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE-FKKVKAASEKEIEDIR 117
EK ++NLNDRLA Y+E V+ L++ A LE +++ ++H + F+K K I+D++
Sbjct: 162 EKATMQNLNDRLASYMEKVRSLEDSNADLEEKIWNWYDTHGPQAFRKDYGHYYKTIKDLK 221
Query: 118 KALDRES--SSKSALAIEKRRL 137
+ E+ ++K+ L ++ R+
Sbjct: 222 DQILDETMDNNKTMLDLDNTRM 243
>gi|114326309|ref|NP_001041541.1| vimentin [Gallus gallus]
gi|138533|sp|P09654.2|VIME_CHICK RecName: Full=Vimentin
gi|212868|gb|AAA49134.1| vimentin [Gallus gallus]
Length = 460
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 10 TPAKTPSASRGSSSR-QTSEVREEPPQPQPQSQPPRPGSPLSPTI-----ISRRQEKNEL 63
+ A+ SAS G R + + VR P P L+ I +R EK EL
Sbjct: 43 SSARYVSASPGGVYRTKATSVRLRSSMP-PMRMHDAVDFTLADAINTEFKANRTNEKVEL 101
Query: 64 KNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRE 123
+ LNDR A YI+ V+ L+ L L ++ T+ + E+E+ D+R+ +D+
Sbjct: 102 QELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDL---YEEEMRDVRRQVDQL 158
Query: 124 SSSKSALAIEKRRLLDELLDLKNK 147
++ K+ + +E+ L D+++ L+ K
Sbjct: 159 TNDKARVEVERDNLADDIMRLREK 182
>gi|311270880|ref|XP_001928806.2| PREDICTED: neurofilament heavy polypeptide [Sus scrofa]
Length = 1049
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
+++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 85 CMVAARTEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 139
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 140 LYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 179
>gi|148667985|gb|EDL00402.1| desmin [Mus musculus]
Length = 493
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 125 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 181
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 182 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 216
>gi|18858425|ref|NP_571231.1| keratin 5 [Danio rerio]
gi|6180207|gb|AAF05847.1|AF197909_1 type II cytokeratin [Danio rerio]
Length = 558
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 143 IDPNIQVVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKVLE-TKWSLLQEQTTTRSNIDA 201
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + + + D KNK
Sbjct: 202 MFEAYIANLRRQLDGLGNEKMKLEGELKNMQNLVEDFKNK 241
>gi|449265569|gb|EMC76747.1| Keratin, type II cytoskeletal 75, partial [Columba livia]
Length = 474
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L E+ HT K ++ E I
Sbjct: 159 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQ-EQGHTVTRKSLEPLFESYI 217
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD +S L E R + D + D KNK
Sbjct: 218 NNMRRQLDSLMGERSRLDTELRNMQDMVEDFKNK 251
>gi|89114116|gb|ABD61649.1| neurofilament subunit NF-132 [Petromyzon marinus]
Length = 750
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQ--NDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR EK L++LNDR A YIE V L+ N + E S Y ++S V E+E
Sbjct: 100 SRVNEKQLLQDLNDRFAGYIEKVHDLEQKNKELETEISAYRQKQSGPARGGGVSDVYEQE 159
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
I+++R+ ++ + K+ + IE+ L +E+ L+ K
Sbjct: 160 IKELRELIEHINGEKTTVQIEQEHLDEEIQRLREK 194
>gi|432901997|ref|XP_004076983.1| PREDICTED: alpha-internexin-like [Oryzias latipes]
Length = 459
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +I+ V++L+ LE L ++ + + E +V ++E+
Sbjct: 91 IIRTNEKEQLQGLNDRFATFIDKVRQLEQQNKVLETELVTLRQKQS-EPSRVAQLYQQEL 149
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDEL 141
++R L+ + K + IEK + DEL
Sbjct: 150 RELRSQLEEMNRDKGHILIEKNNMEDEL 177
>gi|39645432|gb|AAH63955.1| Krt5 protein [Danio rerio]
Length = 553
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 133 IDPNIQVVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKVLE-TKWSLLQEQTTTRSNIDA 191
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + + + D KNK
Sbjct: 192 MFEAYIANLRRQLDGLGNEKMKLEGELKNMQNLVEDFKNK 231
>gi|432934211|ref|XP_004081909.1| PREDICTED: desmin-like [Oryzias latipes]
Length = 343
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEF-KKVKAASEKEI 113
+R EK EL++LNDR A YIE V+ L+ A+L IE+ E +V E+E+
Sbjct: 103 TRTNEKAELQHLNDRFASYIEKVRFLEQQNAALS---VEIEKLRVREGPGRVAEMYEEEM 159
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R+ ++ SS ++ + +E+ L D+L LK
Sbjct: 160 RELRRQIEVLSSQRARVEVERDNLADDLQKLK 191
>gi|148225202|ref|NP_001079278.1| internexin neuronal intermediate filament protein, alpha [Xenopus
laevis]
gi|1698628|gb|AAB41403.1| xefiltin [Xenopus laevis]
Length = 490
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V L+ LE L ++ + +E ++ ++E+
Sbjct: 86 IIRTNEKEQLQGLNDRFAMFIEKVHNLEQQNKVLETELTALRQRQ-SEPSRLGELYQQEM 144
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+++R ++ ++ K+ + IE+ L D+L LK K
Sbjct: 145 KELRAQVEDLNAEKAQIIIERDNLEDDLEKLKGK 178
>gi|118453|sp|P02542.1|DESM_CHICK RecName: Full=Desmin
Length = 463
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YIE V+ L+ A + + + T +V E+E+
Sbjct: 95 TRTNEKVELQELNDRFANYIEKVRFLEQQNALMVAEVNRLRGKQPT---RVAEMYEEELR 151
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D + ++ + +E+ LLD L LK K
Sbjct: 152 ELRRQVDALTGQRARVEVERDNLLDNLQKLKQK 184
>gi|47220311|emb|CAG03345.1| unnamed protein product [Tetraodon nigroviridis]
Length = 470
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V L+ LE L ++ + E ++ ++EI
Sbjct: 85 IIRTNEKEQMQGLNDRFAMFIEKVHNLEQHNKMLETELSALRQRQ-AEPSRLADIYQQEI 143
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + KS L IE+ + D+L L+ K
Sbjct: 144 RELRSQLEELNGEKSQLLIERDNIEDDLQKLRGK 177
>gi|229891191|sp|B4F721.1|NFL_XENTR RecName: Full=Neurofilament light polypeptide; Short=NF-L; AltName:
Full=Neurofilament triplet L protein
gi|195539679|gb|AAI68098.1| Unknown (protein for IMAGE:7550306) [Xenopus (Silurana) tropicalis]
Length = 557
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R QEK +L++LNDR A +IE V +L+ LE L + + H E +++ E+E+
Sbjct: 81 IVRTQEKAQLQDLNDRFANFIERVHELEQRNKVLEAELLLLRQKH-NEPSRLRDLYEQEV 139
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDEL 141
++R A + + + + E+ RL D L
Sbjct: 140 RELRLAQEEATGDRQTMRNERERLEDAL 167
>gi|47217817|emb|CAG07231.1| unnamed protein product [Tetraodon nigroviridis]
Length = 142
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ LNDR A YIE V+ L+ A+L L E E ++ ++E+
Sbjct: 53 TRTKEKMEMMGLNDRFASYIEKVRLLEQQNAALAAEL---ERLRGREPSRLGDVYQEELR 109
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R +D S++K+ L I++ L +L LK +
Sbjct: 110 ELRAQVDGLSAAKARLEIQRDNLAADLATLKQR 142
>gi|2959450|dbj|BAA25132.1| desmin [Gallus gallus]
Length = 448
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YIE V+ L+ A + + + E +V E+E+
Sbjct: 87 TRTNEKVELQELNDRFANYIEKVRFLEQQNALM---VAEVNRLRGKEPTRVAEMYEEELR 143
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D + ++ + +E+ LLD+L LK +
Sbjct: 144 ELRRQVDALTGQRARVEVERDNLLDDLQKLKQR 176
>gi|348523353|ref|XP_003449188.1| PREDICTED: intermediate filament protein ON3-like [Oreochromis
niloticus]
Length = 520
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 101 IDPNIQLVRTQEKEQIKSLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQGQTTTRSNIDA 159
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 160 MFEAYIANLRRQLDGLGNDKMKLEADLHNMQGLVEDFKNK 199
>gi|183637292|gb|ACC64564.1| muscle-specific intermediate filament desmin (predicted)
[Rhinolophus ferrumequinum]
Length = 470
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A L + ++ T +V E+E
Sbjct: 102 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAVLAAEVNRLKAREPT---RVAEIYEEE 158
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 159 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 193
>gi|432864499|ref|XP_004070324.1| PREDICTED: intermediate filament protein ON3-like [Oryzias latipes]
Length = 526
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK+++K LN+R A +I+ V+ L+ LE + +S + TT + A
Sbjct: 127 IDPNIQIIRSQEKDQIKVLNNRFASFIDKVRFLEQQNKMLE-TKWSFLQEQTTTRSNIDA 185
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + + D K K
Sbjct: 186 MFEAYIANLRRQLDGLGNEKVKLEGEVKNMQGLVEDFKTK 225
>gi|426247474|ref|XP_004017510.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament heavy polypeptide
[Ovis aries]
Length = 942
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 85 CMVVARSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 139
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 140 LYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 179
>gi|538257|gb|AAA21472.1| intermediate filament protein, partial [Onchocerca volvulus]
Length = 542
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ +LND LA YIE V+ L+ A L L + + V+ E E++
Sbjct: 30 TREREKKEMSDLNDALASYIEKVRFLEAQNAKLAADLNLLRSRWGKDSVNVRTMYESELQ 89
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
+ RK +D ++ + L R+L+DEL
Sbjct: 90 EARKIIDDTNNEREDLEKRIRKLIDEL 116
>gi|417401525|gb|JAA47645.1| Putative nuclear envelope protein lamin intermediate filament
superfamily [Desmodus rotundus]
Length = 472
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 3 GRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPG--------SPLSPTII 54
GR + + P ASRGSS +R P PG S L+P +
Sbjct: 19 GRGAQVRLSSVRPGASRGSSLYGLGTLRPRVAVHSAYGDPVGPGIHQVTINQSLLTPLQV 78
Query: 55 --------SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+R++E+ ++K LN++ A +I+ V+ L+ LE ++E + + +
Sbjct: 79 HIDPSIQQARQEEREQIKTLNNKFASFIDKVRFLEQQNKLLETKWALLQEQKSVKSSCLP 138
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I +RK L+ S L +E + D + D KNK
Sbjct: 139 GIFEARIAGLRKQLEAVQMDGSRLEMELQNTQDTVEDFKNK 179
>gi|308494591|ref|XP_003109484.1| CRE-IFA-1 protein [Caenorhabditis remanei]
gi|308245674|gb|EFO89626.1| CRE-IFA-1 protein [Caenorhabditis remanei]
Length = 567
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 39 AGSGLSPFGSNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 98
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E+ D +K +D + + + + +++ D+L +++ K
Sbjct: 99 KWGKDTHNIRNMYEGELADAQKLIDDTNKQRKDMESQIKKMQDDLAEIRRK 149
>gi|609535|gb|AAB37740.1| 66 kDa neurofilament protein NF-66 [Mus musculus]
Length = 501
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ +LE L ++ + H E +V ++E
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRH-AEPSRVGQLFQRER 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ SS+++ +E+ L +E+ L+ +
Sbjct: 148 RELRAQLEEASSARAQALLERDGLAEEVQRLRAR 181
>gi|47575885|ref|NP_001001195.1| keratin, type II cytoskeletal 5 [Gallus gallus]
gi|46399073|gb|AAS92198.1| type II alpha-keratin IIA [Gallus gallus]
Length = 599
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE +SL E+ HT K ++ E I
Sbjct: 171 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQ-EQGHTVTRKSLEPLFETYI 229
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD + L E R + D + D KNK
Sbjct: 230 NNLRRQLDSLMGERGRLDSELRSMQDMVEDFKNK 263
>gi|344251698|gb|EGW07802.1| Desmin [Cricetulus griseus]
Length = 471
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 102 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 158
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 159 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 193
>gi|348523283|ref|XP_003449153.1| PREDICTED: keratin, type II cytoskeletal 8-like [Oreochromis
niloticus]
Length = 571
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN+R A +IE V+ L+ LE + +S+ + TT + A E I +
Sbjct: 160 RTQEKEQIKTLNNRFANFIEKVRFLEQQNKMLE-TKWSLLQEQTTTRSNIDAMFEAYIAN 218
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E + + + D KNK
Sbjct: 219 LRRQLDGLGNEKIKLESELKNMQGLVEDFKNK 250
>gi|440911054|gb|ELR60783.1| Desmin, partial [Bos grunniens mutus]
Length = 400
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 30 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 86
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 87 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 121
>gi|410899166|ref|XP_003963068.1| PREDICTED: intermediate filament protein ON3-like [Takifugu
rubripes]
Length = 514
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK+++K+LN+R A +I+ V+ L+ LE + +++ + TT + A
Sbjct: 99 IDPTIQAVRTQEKDQIKSLNNRFASFIDKVRFLEQQNKMLE-TKWNLLQGQTTTRSNIDA 157
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 158 MFEAYITNLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 197
>gi|431917947|gb|ELK17176.1| Desmin [Pteropus alecto]
Length = 482
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 103 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 159
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ + ++ + +E+ LLD+L LK K
Sbjct: 160 LRELRRQVEVLHNQRARVDVERDNLLDDLQRLKAK 194
>gi|392341737|ref|XP_002727027.2| PREDICTED: keratin, type II cytoskeletal 79-like, partial [Rattus
norvegicus]
Length = 509
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 118 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVARSLEPFFEGYL 177
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + S + L +E R + D L D KNK
Sbjct: 178 NTLRRQLDTKQSERGRLDMELRNVQDNLEDFKNK 211
>gi|187936089|gb|ACD37583.1| filament protein [Philodina roseola]
Length = 523
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR +E+ EL LND+ A Y+E V+ L QN K +E + + E T +++K+ E E
Sbjct: 36 SREKERLELSTLNDKFADYVEKVRYLEAQNKKIQMETNF--LHEKQTDNCQRIKSMFELE 93
Query: 113 IEDIRKALDRESSSKSALAI 132
++ +++ ++R KS + I
Sbjct: 94 MKQLKEIIERTFKDKSTMLI 113
>gi|354505890|ref|XP_003515000.1| PREDICTED: keratin, type II cytoskeletal 79 [Cricetulus griseus]
gi|344258527|gb|EGW14631.1| Keratin, type II cytoskeletal 79 [Cricetulus griseus]
Length = 531
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 136 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVTRNLEPLFETYL 195
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD + S L +E R + D L D KNK
Sbjct: 196 SNLRRQLDAKQSEHGRLDMELRSVQDNLEDFKNK 229
>gi|317418883|emb|CBN80921.1| Keratin, type II cytoskeletal 8 [Dicentrarchus labrax]
Length = 557
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI + R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT +
Sbjct: 123 IDPTIQAIRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWKLLQEQTTSHSNIDV 181
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++RK LD K L + + + D KNK
Sbjct: 182 MFEAYIANLRKQLDNLGHEKYKLESDLHHMTGLVEDFKNK 221
>gi|226726294|sp|P12036.4|NFH_HUMAN RecName: Full=Neurofilament heavy polypeptide; Short=NF-H; AltName:
Full=200 kDa neurofilament protein; AltName:
Full=Neurofilament triplet H protein
gi|6470331|gb|AAF13722.1|AF203032_1 neurofilament protein [Homo sapiens]
gi|49522839|gb|AAH73969.1| NEFH protein [Homo sapiens]
gi|168269480|dbj|BAG09867.1| neurofilament heavy polypeptide [synthetic construct]
Length = 1026
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|2642598|gb|AAB87068.1| high molecular-weight neurofilament [Rattus norvegicus]
Length = 1072
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS---- 109
++ R EK +L+ LNDR A YI+ V++L+ +LE ++ + +K +AA
Sbjct: 89 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRTLEGEAAALRQ------QKGRAAMGELY 142
Query: 110 EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ + +E+ LL+++ ++ +
Sbjct: 143 EREVREMRGAVLRLGAARGHVRLEQEHLLEDIAHVRQR 180
>gi|332859533|ref|XP_515058.3| PREDICTED: neurofilament heavy polypeptide isoform 3 [Pan
troglodytes]
Length = 1029
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|307746704|dbj|BAJ21222.1| intermediate filament protein A [Aplysia kurodai]
Length = 582
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E++NLN+RLA YIE V L LE ++ + + ++ A E E+
Sbjct: 75 NREKEKREMQNLNERLASYIEKVHFLDAQCKKLEAENEALRNRKMEDLQPIRDAYENELA 134
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
RK +D SSSK + L DE+ L++
Sbjct: 135 QARKVIDELSSSKGVAEAKLVGLQDEISQLRD 166
>gi|297484942|ref|XP_002694652.1| PREDICTED: neurofilament heavy polypeptide isoform 2 [Bos taurus]
gi|296478433|tpg|DAA20548.1| TPA: neurofilament, heavy polypeptide 200kDa-like isoform 2 [Bos
taurus]
Length = 1023
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 85 CVVVARSEKEQLQVLNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 139
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 140 LYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 179
>gi|83305012|sp|P16884.4|NFH_RAT RecName: Full=Neurofilament heavy polypeptide; Short=NF-H; AltName:
Full=200 kDa neurofilament protein; AltName:
Full=Neurofilament triplet H protein
Length = 1072
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS---- 109
++ R EK +L+ LNDR A YI+ V++L+ +LE ++ + +K +AA
Sbjct: 89 VAARSEKEQLQALNDRFAGYIDKVRQLEAHNRTLEGEAAALRQ------QKGRAAMGELY 142
Query: 110 EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ + +E+ LL+++ ++ +
Sbjct: 143 EREVREMRGAVLRLGAARGHVRLEQEHLLEDIAHVRQR 180
>gi|47218563|emb|CAG10262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 473
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASE 110
+ +R EK EL++LNDR A YIE V+ L QN ++E +E E ++ E
Sbjct: 104 LTTRTNEKAELQHLNDRFASYIEKVRFLEQQNQALTVE-----VERLRGREPTRISDMYE 158
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+E+ D+R+ ++ ++ +S + +E+ L D+L LK
Sbjct: 159 EEMNDLRRQVEILTNQRSRIEVERDNLADDLDKLK 193
>gi|194380258|dbj|BAG63896.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 89 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 147
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 148 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 183
>gi|1841430|emb|CAA33366.1| heavy neurofilament subunit [Homo sapiens]
Length = 1020
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|124233|sp|P22488.2|IFEA_HELAS RecName: Full=Non-neuronal cytoplasmic intermediate filament
protein; Short=IF
gi|829208|emb|CAA39416.1| non-neuronal intermediate filament protein A [Helix aspersa]
Length = 576
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPGSPLSPTIIS-----RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
QS P LS + I+ R +EK E++NLN+RLA YIE V L LE +
Sbjct: 48 QSITPGVYQQLSSSGITDFRGTREKEKREMQNLNERLASYIEKVHFLDAQVKKLEAENEA 107
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + + ++ A E E+ RK +D SS+K + L DE+ L+
Sbjct: 108 LRNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSEAKVAGLQDEIASLR 159
>gi|392349739|ref|XP_003750458.1| PREDICTED: keratin, type II cytoskeletal 79-like [Rattus
norvegicus]
Length = 528
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 137 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVARSLEPFFEGYL 196
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + S + L +E R + D L D KNK
Sbjct: 197 NTLRRQLDTKQSERGRLDMELRNVQDNLEDFKNK 230
>gi|194674395|ref|XP_870725.3| PREDICTED: neurofilament heavy polypeptide isoform 2 [Bos taurus]
Length = 1023
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 85 CVVVARSEKEQLQVLNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 139
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 140 LYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 179
>gi|22164776|ref|NP_666175.1| keratin, type II cytoskeletal 79 [Mus musculus]
gi|123797712|sp|Q8VED5.2|K2C79_MOUSE RecName: Full=Keratin, type II cytoskeletal 79; AltName:
Full=Cytokeratin-79; Short=CK-79; AltName:
Full=Keratin-79; Short=K79; AltName: Full=Type-II
keratin Kb38
gi|21595228|gb|AAH31593.1| Keratin 79 [Mus musculus]
gi|114325411|gb|AAH19155.2| Keratin 79 [Mus musculus]
Length = 531
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 136 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVARSLEPFFENYL 195
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + S + L +E R + D L D KNK
Sbjct: 196 STLRRQLDTKQSERGRLDMELRNVQDNLEDFKNK 229
>gi|32483416|ref|NP_066554.2| neurofilament heavy polypeptide [Homo sapiens]
gi|119580209|gb|EAW59805.1| neurofilament, heavy polypeptide 200kDa, isoform CRA_b [Homo
sapiens]
Length = 1020
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 148
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 149 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|74203430|dbj|BAE20872.1| unnamed protein product [Mus musculus]
Length = 469
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 158 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 192
>gi|118455|sp|P02541.2|DESM_MESAU RecName: Full=Desmin
gi|387071|gb|AAA37072.1| desmin, partial [Mesocricetus auratus]
gi|19352179|dbj|BAB85979.1| desmin [Mesocricetus auratus]
Length = 469
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 158 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 192
>gi|297708570|ref|XP_002831036.1| PREDICTED: neurofilament heavy polypeptide [Pongo abelii]
Length = 999
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 89 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 147
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 148 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 183
>gi|38197676|gb|AAH61872.1| Desmin [Rattus norvegicus]
gi|149016188|gb|EDL75434.1| desmin [Rattus norvegicus]
Length = 469
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 158 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 192
>gi|410900918|ref|XP_003963943.1| PREDICTED: alpha-internexin-like [Takifugu rubripes]
Length = 450
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+ R EK +L+ LNDR A +I+ V+ L+ LE L S+ + + E +V ++E+
Sbjct: 82 VIRTNEKEQLQGLNDRFAMFIDKVRHLEQQNKGLEMELASLRQKQS-EPSRVAQLYQQEL 140
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDEL 141
D+R ++ S K+ IE+ L DE
Sbjct: 141 RDLRSQVEELSRDKNRYLIERNNLEDEF 168
>gi|148672069|gb|EDL04016.1| cDNA sequence BC031593 [Mus musculus]
Length = 548
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 153 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVARSLEPFFENYL 212
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + S + L +E R + D L D KNK
Sbjct: 213 STLRRQLDTKQSERGRLDMELRNVQDNLEDFKNK 246
>gi|266617|sp|Q01241.1|NF70_LOLPE RecName: Full=70 kDa neurofilament protein; Short=NF70
gi|161296|gb|AAA29993.1| 70 kDa neurofilament protein [Doryteuthis pealeii]
Length = 615
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK ++++LN+R A YIE V+ L+ L L ++ E +K E E+E
Sbjct: 92 NREREKQDMRDLNERFANYIEKVRFLEAQNKKLAGELEELKSKWGKETSAIKEMYETELE 151
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
+ RK +D + K L + L+D+L
Sbjct: 152 EARKLIDATNKEKITLDVRVTELIDQL 178
>gi|338716602|ref|XP_001916906.2| PREDICTED: LOW QUALITY PROTEIN: alpha-internexin-like [Equus
caballus]
Length = 493
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 36 PQPQSQPPRPGS--PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
P + P PG + SR EK +L+ LNDR A +IE V +L+ +LE L +
Sbjct: 70 PASEGLGPEPGGRRARNEYKTSRTHEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAA 129
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKAL 120
+ + H E +V ++E+ D+R L
Sbjct: 130 LRQRH-AEPSRVGELFQRELRDLRAQL 155
>gi|27529742|dbj|BAA74868.2| KIAA0845 protein [Homo sapiens]
Length = 1034
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 98 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 156
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 157 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 192
>gi|149031961|gb|EDL86873.1| rCG50520 [Rattus norvegicus]
Length = 500
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L + +T + ++ E +
Sbjct: 109 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQSQNTGVARSLEPFFEGYL 168
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + S + L +E R + D L D KNK
Sbjct: 169 NTLRRQLDTKQSERGRLDMELRNVQDNLEDFKNK 202
>gi|325296823|ref|NP_001191653.1| cytoplasmic intermediate filament protein A [Aplysia californica]
gi|5584|emb|CAA42839.1| cytoplasmic intermediate filament protein A [Aplysia californica]
gi|228592|prf||1807163A intermediate filament protein
Length = 582
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E++NLN+RLA YIE V L LE ++ + + ++ A E E+
Sbjct: 75 NREKEKREMQNLNERLASYIEKVHFLDAQCKKLEAENEALRNRKMEDLQPIRDAYENELA 134
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
RK +D SSSK + L DE+ L++
Sbjct: 135 QARKVIDELSSSKGVAEAKLVGLQDEISQLRD 166
>gi|33563250|ref|NP_034173.1| desmin [Mus musculus]
gi|3915671|sp|P31001.3|DESM_MOUSE RecName: Full=Desmin
gi|21594446|gb|AAH31760.1| Desmin [Mus musculus]
gi|74206494|dbj|BAE21141.1| unnamed protein product [Mus musculus]
Length = 469
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 158 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 192
>gi|431920878|gb|ELK18649.1| Neurofilament heavy polypeptide [Pteropus alecto]
Length = 882
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
+++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 87 CVVAARSEKEQLQVLNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 141
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R + R +++ L +E+ LL+++ ++ +
Sbjct: 142 LYEREVREMRGVVLRLGAARGQLRLEQEHLLEDIAHVRQR 181
>gi|354497066|ref|XP_003510643.1| PREDICTED: desmin-like [Cricetulus griseus]
Length = 470
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 102 LATRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 158
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 159 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 193
>gi|324502769|gb|ADY41216.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 571
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 46 GSPLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
GS + TI SR +EK E+ +LNDRLA YIE V+ L+ L L + +
Sbjct: 52 GSNAASTIRDSREREKKEMSDLNDRLATYIEKVRFLEAQNRKLTADLDLLRGKWGKDTFN 111
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+K E E+ + RK ++ ++ + L + ++ DEL D + K
Sbjct: 112 IKQMYEGELAEARKLINDTNAQRKDLEDQINKMRDELADYRRK 154
>gi|27527111|emb|CAC87095.1| type II keratin 2 [Lampetra fluviatilis]
Length = 438
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R QEK +K+LNDR A +I+ V+ L+ LE Y+++E TT V E I
Sbjct: 60 TRTQEKEAIKHLNDRFANFIDKVRFLEQQNKVLEAQWYALQEKTTTG-SSVDEMFEAYIN 118
Query: 115 DIRKALDRESSSKSAL 130
+R+ LD K L
Sbjct: 119 GLRRQLDGLGHDKGQL 134
>gi|296478432|tpg|DAA20547.1| TPA: neurofilament, heavy polypeptide 200kDa-like isoform 1 [Bos
taurus]
Length = 1081
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS-- 109
++ R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA
Sbjct: 85 CVVVARSEKEQLQVLNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGE 139
Query: 110 --EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 140 LYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 179
>gi|124740|sp|P18520.1|ION3_CARAU RecName: Full=Intermediate filament protein ON3
Length = 520
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ ++ T + A
Sbjct: 98 IDPNIQVVRTQEKEQMKSLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQNQTATRSNIDA 156
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 157 MFEAYINNLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 196
>gi|440896113|gb|ELR48138.1| Keratin, type II cytoskeletal 75, partial [Bos grunniens mutus]
Length = 534
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H ++ E I +
Sbjct: 143 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKATRANLEPMFEGYINN 201
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD +S L +E + + D + D KNK
Sbjct: 202 LRRQLDSLGGERSRLEVELKSMQDVVEDFKNK 233
>gi|41056085|ref|NP_956374.1| keratin, type II cytoskeletal 8 [Danio rerio]
gi|82202213|sp|Q6NWF6.1|K2C8_DANRE RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin-8; Short=CK-8; AltName: Full=Keratin-8;
Short=K8
gi|37682099|gb|AAQ97976.1| keratin 8 [Danio rerio]
gi|45709374|gb|AAH67610.1| Keratin 8 [Danio rerio]
Length = 520
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + +S+ ++ T + A
Sbjct: 104 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQNQTATRSNIDA 162
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 163 MFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 202
>gi|159155987|gb|AAI54778.1| Keratin 8 [Danio rerio]
Length = 520
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + +S+ ++ T + A
Sbjct: 104 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQNQTATRSNIDA 162
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 163 MFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 202
>gi|149714895|ref|XP_001504425.1| PREDICTED: keratin, type II cytoskeletal 7 [Equus caballus]
Length = 465
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 49 LSPTIISRRQEKNE-LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I RQE+ E +K LND+ A +I+ V+ L+ LE ++E + + V
Sbjct: 80 IDPSIQQVRQEEREQIKTLNDKFASFIDKVRFLEQQNKLLETKWALLQEQKSAKSSCVPG 139
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E +I +RK L+ L +E R + D + D KNK
Sbjct: 140 IFEAQIAGLRKQLEGLQMDGGRLEVELRGVQDLVEDFKNK 179
>gi|308500081|ref|XP_003112226.1| CRE-LMN-1 protein [Caenorhabditis remanei]
gi|308268707|gb|EFP12660.1| CRE-LMN-1 protein [Caenorhabditis remanei]
Length = 603
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR QEK+ L +LN RLAQYI+ V++L+ + L+ + IE TE + E E
Sbjct: 77 SRLQEKDHLTSLNSRLAQYIDKVRQLEQENNRLQVQIRDIEVVEKTEKSNLADRFEAEKA 136
Query: 115 DIRKALD 121
+R+ALD
Sbjct: 137 RLRRALD 143
>gi|432103442|gb|ELK30547.1| Desmin [Myotis davidii]
Length = 407
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 39 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 95
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ +S + +E+ LLD+L LK K
Sbjct: 96 LRELRRQVEVLTNQRSRVDLERDNLLDDLQRLKAK 130
>gi|225708234|gb|ACO09963.1| Desmin [Osmerus mordax]
Length = 473
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L+ A+L + +E E ++ E+E+
Sbjct: 104 TRTNEKVELQHLNDRFASYIEKVRFLEQQNATL---VVEVERLRGREPTRIADLYEEEMR 160
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R ++ ++ +S + +E+ L D++ LK
Sbjct: 161 DLRLQVEALTNQRSRVEVERDNLADDVDKLK 191
>gi|4761086|gb|AAD29248.1|AF101065_1 intermediate filament gliarin [Hirudo medicinalis]
Length = 638
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 38 PQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
P S P S +S SR +EK ++++LN+R A YIE V+ L+ L L ++
Sbjct: 76 PSSYAPLASSGVSSVKNSREREKKDMQDLNERFASYIEKVRFLEAQNKRLTDELDKLKSR 135
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAI 132
+ ++KA + E+++ R+ LD K+ L I
Sbjct: 136 WGKDTTQIKAMFQVELDEARRLLDDGEKEKARLEI 170
>gi|148229152|ref|NP_001079951.1| uncharacterized protein LOC379642 [Xenopus laevis]
gi|34785889|gb|AAH57721.1| MGC68885 protein [Xenopus laevis]
Length = 480
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V+ L+ LE L ++ + H +E ++ E+
Sbjct: 82 IIRTNEKEQLQGLNDRFATFIEKVRNLEQQNKVLETELTALRQRH-SEPSRLGELYRLEM 140
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+++R + ++ K+ + IE+ L D+L LK K
Sbjct: 141 KELRAQVHDLNAEKAQIIIERDNLEDDLEKLKGK 174
>gi|62204269|gb|AAH92715.1| Desm protein [Danio rerio]
gi|197247290|gb|AAI65607.1| Desm protein [Danio rerio]
Length = 488
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L+ ++L IE E ++ E+E+
Sbjct: 98 TRTNEKAELQHLNDRFASYIEKVRFLEQQNSAL---TVEIERLRGREPTRIAELYEEEMR 154
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R ++ ++ +S + IE+ L+D+L LK
Sbjct: 155 ELRGQVEALTNQRSRVEIERDNLVDDLQKLK 185
>gi|332217894|ref|XP_003258097.1| PREDICTED: neurofilament heavy polypeptide [Nomascus leucogenys]
Length = 997
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK 111
+ + R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+
Sbjct: 87 AVAASRSEKEQLQVLNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYER 145
Query: 112 EIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ ++R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 146 EVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 181
>gi|15667368|emb|CAC42513.2| keratin gamma [Lampetra fluviatilis]
Length = 559
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
G P +++R E+ L+ LN+R A YI VQ+LQ++ A LE L+S+
Sbjct: 156 GGRAIPPMMTRETERQTLRTLNERFATYINKVQQLQHENAMLEAQLHSL 204
>gi|410923459|ref|XP_003975199.1| PREDICTED: uncharacterized protein LOC101076908 [Takifugu rubripes]
Length = 1047
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SRR EK L+ LNDR A YI+ V+ L+ +LE ++ ++ V E+E+
Sbjct: 52 MSRRTEKEILQALNDRFAGYIDKVRHLEMHNRNLEAEAEALRQNQAGRA-SVDEQYEREL 110
Query: 114 EDIRKALDRESSSKSALAIE 133
ED+R L + + K+ LA+E
Sbjct: 111 EDLRGLLVQLTGEKAGLALE 130
>gi|344281503|ref|XP_003412518.1| PREDICTED: neurofilament medium polypeptide-like [Loxodonta
africana]
Length = 928
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
PG L +SR EK +L+ LNDR A YIE V L+ +E + ++ + ++ +
Sbjct: 90 PGGDLK---LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQASQ-AQ 145
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ A ++EI ++R L+ + K+ + ++ L +++ LK +
Sbjct: 146 LGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|266616|sp|Q01240.1|NF60_LOLPE RecName: Full=60 kDa neurofilament protein; Short=NF60
gi|161294|gb|AAA29992.1| 60 kDa neurofilament protein [Doryteuthis pealeii]
Length = 511
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK ++++LN+R A YIE V+ L+ L L ++ E +K E E+E
Sbjct: 92 NREREKQDMRDLNERFANYIEKVRFLEAQNKKLAGELEELKSKWGKETSAIKEMYETELE 151
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
+ RK +D + K L + L+D+L
Sbjct: 152 EARKLIDATNKEKITLDVRVTELIDQL 178
>gi|18858539|ref|NP_571038.1| desmin a [Danio rerio]
gi|5932493|gb|AAB03217.2| desmin [Danio rerio]
Length = 473
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L+ ++L IE E ++ E+E+
Sbjct: 98 TRTNEKAELQHLNDRFASYIEKVRFLEQQNSAL---TVEIERLRGREPTRIAELYEEEMR 154
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R ++ ++ +S + IE+ L+D+L LK
Sbjct: 155 ELRGQVEALTNQRSRVEIERDNLVDDLQKLK 185
>gi|405963175|gb|EKC28772.1| 60 kDa neurofilament protein [Crassostrea gigas]
Length = 933
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ +S SR +EK +++ LN+R A YIE V+ L+ L L ++ + E VK
Sbjct: 100 TGVSTVKNSREREKKDMQELNERFANYIEKVRFLEAQNRKLASELETLRDKWGQETSAVK 159
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E E+ + RK +D + K+ L I+ + L +++ D++
Sbjct: 160 QMYESELAEARKLIDDLTREKTNLEIKNQSLQEQMQDMQ 198
>gi|189533895|ref|XP_001333768.2| PREDICTED: neurofilament light polypeptide-like [Danio rerio]
Length = 698
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A YIE V +L+ +L+ L + + H E +++ E+EI
Sbjct: 86 RTQEKAQLQDLNDRFAGYIERVHELEQQNRALQAELLLLRQRH-VEPSRLRGLYEQEIRT 144
Query: 116 IRKALD 121
+R A++
Sbjct: 145 LRAAVE 150
>gi|8393823|ref|NP_058725.1| neurofilament medium polypeptide [Rattus norvegicus]
gi|56752|emb|CAA78136.1| Neurofilament protein middle (NF-M) [Rattus norvegicus]
Length = 845
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E ++++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIHALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|402877809|ref|XP_003902606.1| PREDICTED: neurofilament medium polypeptide [Papio anubis]
Length = 1059
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 234 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 292
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 293 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 326
>gi|395834048|ref|XP_003790028.1| PREDICTED: neurofilament heavy polypeptide [Otolemur garnettii]
Length = 945
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+ ++
Sbjct: 95 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRA-AMSELYEREVREM 153
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 154 RGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|205688|gb|AAA41696.1| NF-M protein [Rattus norvegicus]
Length = 845
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E ++++ + + ++ A ++EI
Sbjct: 95 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIHALRQKQAS-HAQLGDAYDQEI 153
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 154 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 187
>gi|128150|sp|P12839.4|NFM_RAT RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament 3; AltName: Full=Neurofilament
triplet M protein
Length = 846
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E ++++ + + ++ A ++EI
Sbjct: 95 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIHALRQKQAS-HAQLGDAYDQEI 153
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 154 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 187
>gi|159741|gb|AAA16613.1| omega-crystallin [Enteroctopus dofleini]
Length = 591
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 42 PPRPGSPLSPTI---------ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P G+ ++ +I +R +EK EL++LN+R A YIE V+ L+ + +L +L
Sbjct: 40 PLSLGTGVASSISHKGVTDIRCNREKEKKELQDLNERFANYIEKVRFLEAENKTLREALK 99
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E +KA + EI++ +K LD S+ L L DEL DL+
Sbjct: 100 KSKRDFNIE--PIKAMYQAEIDETKKLLDDSSNENGNLKARIGTLEDELEDLR 150
>gi|324502926|gb|ADY41278.1| Lamin-1 [Ascaris suum]
Length = 602
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
S +SP +R EK L NLNDRLA YI+ V++L+ + A L + E E + +
Sbjct: 40 SMMSPNRQTRLLEKETLSNLNDRLAVYIDRVRQLEMENARLNVRINESEVVEKKEREDLV 99
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
A E +I+++R +D K+ L ++ + L E +L+ K
Sbjct: 100 ARYETKIKELRDFMDEALKDKTRLNMDAKTALAERDNLRAK 140
>gi|432864501|ref|XP_004070325.1| PREDICTED: intermediate filament protein ON3-like isoform 1
[Oryzias latipes]
Length = 530
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT + A
Sbjct: 101 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWGLLQEQTTTRSNIDA 159
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELL-------DLKNK 147
E I ++R+ LD +L EK +L +LL D KNK
Sbjct: 160 MFEAYIGNLRRQLD-------SLGNEKMKLEADLLNMQGLVEDFKNK 199
>gi|399145793|gb|AFP25101.1| cytovec [Nematostella vectensis]
Length = 760
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 50 SPTIISRRQEKNELKNLNDRLAQYIELVQKL-----QNDKASLEYSLYSIEESHTTEFKK 104
+P +I R EK+ L++LNDR A YI V+++ +N+ + + +EE E
Sbjct: 5 TPILIPRYLEKDHLQSLNDRFANYISRVRQMREHNGRNETINFINTTKILEE----EILA 60
Query: 105 VKAASEKEIEDIRKALD 121
+KA E+++E++R LD
Sbjct: 61 LKAMYERQLEELRSKLD 77
>gi|32452105|emb|CAD38126.1| keratin type IIE [Acipenser baerii]
Length = 487
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K LN+R A +I+ V+ L+ LE + +++ + TT + A
Sbjct: 68 IDPNIQVIRSQEKEQIKGLNNRFASFIDKVRFLEQQNKMLE-TKWNLMQGQTTTKSNINA 126
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + + D KNK
Sbjct: 127 MFEAYIANLRRQLDSLGNDKMKLESDLSNMQNMVEDFKNK 166
>gi|29335502|emb|CAD31062.1| keratin 8 [Danio rerio]
Length = 499
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + +S+ ++ T + A
Sbjct: 83 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQNQTATRSNIDA 141
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 142 MFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 181
>gi|784940|emb|CAA60046.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
Length = 633
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%)
Query: 3 GRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNE 62
G ++ + A S S +R V E P + S +R +EK E
Sbjct: 68 GFNRTITSNASNAFGSLPSGNRVVKIVTEMSSSSMTSGMSPFGQNAASTIRDAREREKKE 127
Query: 63 LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDR 122
+ +LNDRLA YIE V+ L+ L L + + +K E E+ + RK ++
Sbjct: 128 MSDLNDRLADYIEKVRFLEAQNRKLAADLDMLRGRWGKDTSSIKIMYEGELSEARKVIND 187
Query: 123 ESSSKSALAIEKRRLLDELLDLKNK 147
+ + L E ++L DEL + + K
Sbjct: 188 TAKQRDDLEKEIKKLQDELAEYRRK 212
>gi|324507899|gb|ADY43340.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 578
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%)
Query: 3 GRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNE 62
G ++ + A S S +R V E P + S +R +EK E
Sbjct: 13 GFNRTITSNASNAFGSLPSGNRVVKIVTEMSSSSMTSGMSPFGQNAASTIRDAREREKKE 72
Query: 63 LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDR 122
+ +LNDRLA YIE V+ L+ L L + + +K E E+ + RK ++
Sbjct: 73 MSDLNDRLADYIEKVRFLEAQNRKLAADLDMLRGRWGKDTSSIKIMYEGELSEARKVIND 132
Query: 123 ESSSKSALAIEKRRLLDELLDLKNK 147
+ + L E ++L DEL + + K
Sbjct: 133 TAKQRDDLEKEIKKLQDELAEYRRK 157
>gi|32452111|emb|CAD38129.1| vimentin [Acipenser baerii]
Length = 455
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 4 RSKRGATPAKTPS--ASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTI-----ISR 56
RS+ T P+ A++ SS+R +R PQ + S+ LS I +R
Sbjct: 37 RSRVSYTSHSAPTLYATKSSSTR----LRSSAPQTRLLSETL--DFALSDAINTEFKANR 90
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
EK E+++LNDR A YI+ V+ L+ L L ++ TT K+ E E+ ++
Sbjct: 91 TNEKAEMQHLNDRFASYIDKVRFLEQQNKILMAELEQLKGKGTT---KIGDLYEDEMREL 147
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R+ +D+ ++ K+ + +++ L D++ L+ K
Sbjct: 148 RRQVDKLTNEKARVEVDRDNLGDDINRLREK 178
>gi|194500486|gb|ACF75509.1| filament protein [Philodina roseola]
Length = 528
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR +E+ EL LND+ A Y+E V+ L QN K +E + + E T +++K+ E E
Sbjct: 36 SREKERLELSTLNDKFADYVEKVRYLEAQNKKIQMETNF--LHEKQTENCQRIKSMFELE 93
Query: 113 IEDIRKALDRESSSKSALAI 132
++ +++ ++R KS + I
Sbjct: 94 MKQLKEIIERTFKDKSTMLI 113
>gi|149030366|gb|EDL85422.1| neurofilament 3, medium [Rattus norvegicus]
Length = 845
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E ++++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIHALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|224099131|ref|XP_002194692.1| PREDICTED: keratin, type II cytoskeletal 75-like [Taeniopygia
guttata]
Length = 585
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LN++ A +I+ V+ L+ LE ++L E+ HT K ++ E I
Sbjct: 169 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQ-EQGHTVTRKSLEPIFEAYI 227
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD + L E R + D + D KNK
Sbjct: 228 NNLRRQLDSLMGERGRLDSELRSMQDMVEDFKNK 261
>gi|124237|sp|P16275.1|IFEB_HELPO RecName: Full=Non-neuronal cytoplasmic intermediate filament
protein B; Short=IFB
Length = 450
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E++NLN+RLA YIE V L LE ++ + + ++ A E E+
Sbjct: 67 TREKEKREMQNLNERLAGYIEKVHFLDAQVKKLEAENEALRNRKSESLQPIRDAYENELA 126
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
RK +D SS+K + L DE+ L+
Sbjct: 127 QARKVIDELSSTKGVSEAKVAGLQDEIASLR 157
>gi|410918271|ref|XP_003972609.1| PREDICTED: alpha-internexin-like [Takifugu rubripes]
Length = 480
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V+ L+ LE L ++ + E ++ ++E+
Sbjct: 83 IIRTNEKEQMQGLNDRFAMFIEKVRNLEQHNKVLETELSALRQRQ-AEPSRLADIYQQEL 141
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + KS L IE+ + D+L L+ K
Sbjct: 142 RELRSQLEELNGEKSQLLIERDNIEDDLQKLRGK 175
>gi|126343644|ref|XP_001377354.1| PREDICTED: keratin, type II cytoskeletal 75-like [Monodelphis
domestica]
Length = 525
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +SI + H T ++ E I +
Sbjct: 134 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSILQDHKTTKANIEPLFETYINN 192
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ ++ L E + + D + D KNK
Sbjct: 193 LRRQLESLGGERARLETELKSMQDVVEDFKNK 224
>gi|390351187|ref|XP_789168.3| PREDICTED: lamin-A-like [Strongylocentrotus purpuratus]
Length = 516
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
E+ E+ LNDRLA+YI+ V L D + + SI E+ T +++A EKE++D R+
Sbjct: 29 EREEMITLNDRLAKYIDSVHALDLDSSRAQLLDVSIVEARQTAMAEIRAIFEKELDDARR 88
>gi|45239061|gb|AAS55645.1| type II keratin [Liparis atlanticus]
Length = 569
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 48 PLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ P+I + R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT +
Sbjct: 105 AIDPSIQVVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTTRSNID 163
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
A E I ++R+ LD + + E R + + D K K
Sbjct: 164 AMFEAYISNLRRQLDGARQREVKMEGELRNMQGHVEDFKRK 204
>gi|829207|emb|CAA39415.1| non-neuronal intermediate filament protein B [Helix aspersa]
Length = 453
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 39 QSQPPRPGSPLSPTIIS-----RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS 93
QS P LS + I+ R +EK E++NLN+RLA YIE V L LE +
Sbjct: 48 QSITPGVYQQLSSSGITDFRGTREKEKREMQNLNERLASYIEKVHFLDAQVKKLEAENEA 107
Query: 94 IEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + + ++ A E E+ RK +D SS+K + L DE+ L+
Sbjct: 108 LRNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSEAKVAGLQDEIASLR 159
>gi|773571|emb|CAA60122.1| neurofilament protein NF70 [Helix aspersa]
Length = 646
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 38 PQSQPPRPGSPLSPT-IIS----RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
P P + ++ T +IS R +EK ++++LN+R A YIE V+ L+ L L
Sbjct: 83 PSLHMPLGSATVAATGVISFKSNREKEKKDMRDLNERFANYIEKVRFLEAQNKKLASELE 142
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDL 144
+ E K+K E E+ + RK +D + KS L + +L ++L D+
Sbjct: 143 QLRSHWGKETNKIKLMYETELTEARKLIDDTNKEKSRLQLRVGQLEEQLDDV 194
>gi|148224383|ref|NP_001080177.1| desmin [Xenopus laevis]
gi|118457|sp|P23239.1|DESM_XENLA RecName: Full=Desmin
gi|64653|emb|CAA34740.1| desmin [Xenopus laevis]
gi|28302285|gb|AAH46651.1| Des-prov protein [Xenopus laevis]
Length = 458
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L+ L + ++ T +V E+E+
Sbjct: 92 TRTNEKVELQDLNDRFANYIEKVRYLEQQNQILVAEVNRLKGKEPT---RVNELYEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ ++ + +E+ L+D+L LK +
Sbjct: 149 ELRRQVDLVTNQRARVEVERDNLVDDLQKLKQR 181
>gi|432864505|ref|XP_004070326.1| PREDICTED: intermediate filament protein ON3-like isoform 2
[Oryzias latipes]
Length = 520
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT + A
Sbjct: 101 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWGLLQEQTTTRSNIDA 159
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELL-------DLKNK 147
E I ++R+ LD +L EK +L +LL D KNK
Sbjct: 160 MFEAYIGNLRRQLD-------SLGNEKMKLEADLLNMQGLVEDFKNK 199
>gi|397506188|ref|XP_003823613.1| PREDICTED: neurofilament medium polypeptide isoform 1 [Pan
paniscus]
Length = 877
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A E+EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYEQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|348580089|ref|XP_003475811.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal
75-like [Cavia porcellus]
Length = 531
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I ++
Sbjct: 137 KEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQDHKTTRASLEPMFEAYISNL 195
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R+ LD + L +E + + D + D KNK
Sbjct: 196 RRQLDCLGGQRGKLEMELKNMQDMVEDFKNK 226
>gi|346421401|ref|NP_001231074.1| neurofilament, medium polypeptide [Bos taurus]
gi|296484569|tpg|DAA26684.1| TPA: neurofilament, medium polypeptide [Bos taurus]
Length = 931
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|403292392|ref|XP_003937232.1| PREDICTED: neurofilament medium polypeptide [Saimiri boliviensis
boliviensis]
Length = 807
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 202 LSRSSEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 260
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 261 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 294
>gi|432864507|ref|XP_004070327.1| PREDICTED: intermediate filament protein ON3-like isoform 3
[Oryzias latipes]
Length = 514
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT + A
Sbjct: 101 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWGLLQEQTTTRSNIDA 159
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELL-------DLKNK 147
E I ++R+ LD +L EK +L +LL D KNK
Sbjct: 160 MFEAYIGNLRRQLD-------SLGNEKMKLEADLLNMQGLVEDFKNK 199
>gi|4468655|emb|CAB38180.1| cytoplasmic intermediate filament protein [Phascolion strombus]
Length = 604
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR +EK ++++LN+R A YIE V+ L+ L L +++ E VKA + E++
Sbjct: 88 SRDREKKDMQDLNERFANYIEKVRFLEAQNRKLAQELDQLKQKWGKETAAVKAMYQAELD 147
Query: 115 DIRKALDRESSSKSALAI 132
+ RK LD K+ L I
Sbjct: 148 EARKLLDDAEKEKARLEI 165
>gi|358413590|ref|XP_003582606.1| PREDICTED: neurofilament medium polypeptide-like [Bos taurus]
Length = 931
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|432859983|ref|XP_004069333.1| PREDICTED: intermediate filament protein ON3-like [Oryzias latipes]
Length = 560
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K+LN+R A +I+ V+ L+ LE + +S+ + TT + E I +
Sbjct: 179 RTQEKEQIKSLNNRFATFIDKVRFLEQQNKMLE-TKWSLLQQQTTTRSNIDGMFEAYISN 237
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E R + + D K K
Sbjct: 238 LRRQLDGLGNEKMKLEGELRNMQGLVEDFKTK 269
>gi|444721846|gb|ELW62557.1| Neurofilament medium polypeptide [Tupaia chinensis]
Length = 932
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 170 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 228
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 229 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 262
>gi|268579255|ref|XP_002644610.1| C. briggsae CBR-IFA-4 protein [Caenorhabditis briggsae]
Length = 527
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
+T + S G+S +T ++ E P G S SR +EK E+ LND
Sbjct: 2 STATYGSTISSGTS--RTLKITEIGGSTLTSGMSPFGGHAASAIRESRTREKKEMSELND 59
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ +E L + + VK E E+ ++ + ++
Sbjct: 60 RLASYIEKVRFLEAQNRKMEKDLDLLRGKWGHDSTSVKVMFETELRTAKELIADSDKERA 119
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + R+L +EL + +NK
Sbjct: 120 QLEDQIRKLTEELNNYRNK 138
>gi|7447207|pir||T16562 hypothetical protein K05B2.3 - Caenorhabditis elegans
Length = 560
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 14 TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQY 73
T ++ S + +T ++ E P G S SR +EK E+ LNDRLA Y
Sbjct: 6 TYGSTISSGTSRTLKITEIGGSNLTSGMSPFGGHAASAIRESRTREKKEMSELNDRLASY 65
Query: 74 IELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
IE V+ L+ +E L + + VK E E+ + + ++ L +
Sbjct: 66 IEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDLIADSDKERAQLEDQ 125
Query: 134 KRRLLDELLDLKNK 147
++L++EL + +NK
Sbjct: 126 IKKLVEELNNYRNK 139
>gi|341874382|gb|EGT30317.1| CBN-IFA-4 protein [Caenorhabditis brenneri]
Length = 577
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
+T + S G+S +T ++ E P G S SR +EK E+ LND
Sbjct: 24 STATYGSTISSGTS--RTLKITEIGGSTLTSGMSPFGGHAASAIRESRAREKKEMSELND 81
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ +E L + + VK E E++ + + ++
Sbjct: 82 RLASYIEKVRFLEAQNRKMEKDLDLLRGKWGHDSTSVKVMFETELKTAKDLIADSDKERA 141
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + R+L +EL + +NK
Sbjct: 142 QLEDQIRKLTEELNNYRNK 160
>gi|440899815|gb|ELR51064.1| Neurofilament medium polypeptide [Bos grunniens mutus]
Length = 903
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 93 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 151
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 152 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 185
>gi|332825911|ref|XP_001150727.2| PREDICTED: LOW QUALITY PROTEIN: neurofilament medium polypeptide
[Pan troglodytes]
Length = 865
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A E+EI
Sbjct: 41 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYEQEI 99
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 100 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 133
>gi|27527103|emb|CAC87101.1| keratin gamma 2 [Lampetra fluviatilis]
Length = 570
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSI 94
P +++R ++ L++LNDR A YIE VQ+LQ + LE L S+
Sbjct: 137 PPLVTREGQRTVLRSLNDRFAGYIEKVQRLQEENVQLEAHLKSL 180
>gi|11968118|ref|NP_071976.1| desmin [Rattus norvegicus]
gi|1352241|sp|P48675.2|DESM_RAT RecName: Full=Desmin
gi|452779|emb|CAA51920.1| desmin [Rattus norvegicus]
Length = 469
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A Y E V+ L+ A+L + ++ T +V E+E
Sbjct: 101 LATRTNEKVELQELNDRFANYFEKVRFLEQQNAALAAEVNRLKGREPT---RVAELYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+D+L LK K
Sbjct: 158 MRELRRQVEVLTNQRARVDVERDNLIDDLQRLKAK 192
>gi|126305451|ref|XP_001362944.1| PREDICTED: neurofilament medium polypeptide-like [Monodelphis
domestica]
Length = 904
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 46 GSPLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK 104
G+ P + R EK +L+ LNDR A YIE V L+ +E + ++ + + +
Sbjct: 96 GTAAGPDFKLVRANEKEQLQGLNDRFAGYIEKVHSLEQQNQEIEAEIQALRQKQAS-HAQ 154
Query: 105 VKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ E+E+ ++R L++ + K+ + +E L +++ LK +
Sbjct: 155 LGDVYEQELRELRAGLEQVNHEKAQVQLESEHLEEDIHRLKER 197
>gi|260789258|ref|XP_002589664.1| hypothetical protein BRAFLDRAFT_61222 [Branchiostoma floridae]
gi|229274845|gb|EEN45675.1| hypothetical protein BRAFLDRAFT_61222 [Branchiostoma floridae]
Length = 449
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 41 QPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
Q + L + R +K+EL LNDR A +IE V+ L+N LE L +++ +
Sbjct: 106 QASQALVALGQVRVERTGDKDELVGLNDRFASFIEKVRFLENQNRKLEMKLKMVQQKGSG 165
Query: 101 EFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ A E E+ IR+ ++ ++ + +L E+ L E+ +LK +
Sbjct: 166 --PDLGAMWEAELRQIRQLIEVVNTERGSLEAERDGLSGEVKELKTR 210
>gi|400800|sp|P31393.1|PLST_CARAU RecName: Full=Plasticin
gi|213004|gb|AAA49187.1| plasticin [Carassius auratus]
Length = 453
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+R EK EL+ LNDR A +IE V+ L QN K LE Y ++ H ++ ++E
Sbjct: 73 TRSNEKRELQELNDRFASFIEKVRHLEQQNSKLILELGQY--KDQHQGSTGRINELCQQE 130
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDEL 141
+ ++R+ L+ + + + +E+ L +++
Sbjct: 131 MRELRRQLELMAKDRDQMQVERDNLAEDV 159
>gi|327284367|ref|XP_003226910.1| PREDICTED: neurofilament light polypeptide-like [Anolis
carolinensis]
Length = 572
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
R QEK +L++LNDR A +IE V +L+ +LE L + + H E + +A E+EI
Sbjct: 101 RSQEKAQLQDLNDRFACFIERVHELEQQNKALEAELLGLRQRH-AEPSRFRALYEQEI 157
>gi|327260418|ref|XP_003215031.1| PREDICTED: desmin-like [Anolis carolinensis]
Length = 462
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YIE V+ L+ A + + ++ T +V E+E+
Sbjct: 96 TRTNEKVELQELNDRFANYIEKVRYLEQQNALMVAEVNRLKGKEPT---RVAEMYEEELR 152
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ ++ ++ ++ + +E+ LLD+L LK +
Sbjct: 153 ELRRQVELLTNQRARVDVERDNLLDDLQKLKQR 185
>gi|35046|emb|CAA68276.1| NF-M [Homo sapiens]
Length = 916
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|57240089|gb|AAW49254.1| vimentin, partial [Gallus gallus]
Length = 161
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L ++ T+ + E+E+
Sbjct: 73 NRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDLY---EEEMR 129
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R+ +D+ ++ K+ + +E+ L D+++ L+
Sbjct: 130 ELRRQVDQLTNDKARVEVERDNLADDIMRLR 160
>gi|32452109|emb|CAD38128.1| desmin [Acipenser baerii]
Length = 461
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR YIE V+ L+ +L + IE E +V E+E+
Sbjct: 93 TRTNEKAELQHLNDRFVNYIEKVRFLEQQNQTL---VVEIERLKGREPTRVAEIYEEEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ + + +E+ L D+L +K +
Sbjct: 150 ELRRQVDILTNQRGRVEVERDNLADDLQKIKQR 182
>gi|453232797|ref|NP_508836.5| Protein IFA-4 [Caenorhabditis elegans]
gi|1848062|emb|CAA50181.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
gi|412984004|emb|CCD72670.2| Protein IFA-4 [Caenorhabditis elegans]
Length = 575
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
+T + S G+S +T ++ E P G S SR +EK E+ LND
Sbjct: 22 STATYGSTISSGTS--RTLKITEIGGSNLTSGMSPFGGHAASAIRESRTREKKEMSELND 79
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ +E L + + VK E E+ + + ++
Sbjct: 80 RLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDLIADSDKERA 139
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + ++L++EL + +NK
Sbjct: 140 QLEDQIKKLVEELNNYRNK 158
>gi|348528591|ref|XP_003451800.1| PREDICTED: neurofilament heavy polypeptide-like [Oreochromis
niloticus]
Length = 799
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++R+ EK L+ LNDR A YI+ V+ L+ +LE ++ +S V E+E+
Sbjct: 53 MTRKSEKEILQALNDRFAGYIDKVRNLEMHNRNLEAEAAALRQSQAGR-ASVGEHYEREL 111
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R L + + K+ A+E L +++ L+
Sbjct: 112 GDLRGLLQQLTGEKARAAVEHEHLEEDIQHLR 143
>gi|157738649|ref|NP_005373.2| neurofilament medium polypeptide isoform 1 [Homo sapiens]
gi|281185500|sp|P07197.3|NFM_HUMAN RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament 3; AltName: Full=Neurofilament
triplet M protein
Length = 916
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|74912853|sp|Q6QUW1.1|RGP51_LYMST RecName: Full=Retrograde protein of 51 kDa
gi|46578226|gb|AAT01542.1| retrograde protein 51 [Lymnaea stagnalis]
Length = 452
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E++NLN+RLA YIE V L LE ++ + + ++ A E E+
Sbjct: 68 NREKEKREMQNLNERLASYIEKVHFLDAQVKKLEAENEALRNRKVEDLQPIRDAYENELR 127
Query: 115 DIRKALDRESSSKSA 129
RK +D +SSK
Sbjct: 128 QARKVIDELASSKGV 142
>gi|67678152|gb|AAH96757.1| Neurofilament, medium polypeptide [Homo sapiens]
gi|119584006|gb|EAW63602.1| neurofilament 3 (150kDa medium) [Homo sapiens]
gi|148342535|gb|ABQ59046.1| NEFM protein [Homo sapiens]
gi|254071233|gb|ACT64376.1| neurofilament, medium polypeptide 150kDa protein [synthetic
construct]
gi|254071235|gb|ACT64377.1| neurofilament, medium polypeptide 150kDa protein [synthetic
construct]
gi|261858962|dbj|BAI46003.1| neurofilament, medium polypeptide [synthetic construct]
Length = 916
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|402883909|ref|XP_003905438.1| PREDICTED: neurofilament heavy polypeptide [Papio anubis]
Length = 1034
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+ ++
Sbjct: 95 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYEREVREM 153
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 154 RGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 184
>gi|432848323|ref|XP_004066288.1| PREDICTED: alpha-internexin-like [Oryzias latipes]
Length = 482
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V+ L+ LE L ++ + E ++ ++E+
Sbjct: 86 IVRTNEKEQMQGLNDRFAMFIEKVRNLEQHNKVLETELVALRQRQ-AEPSRLAELYQQEM 144
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD + KS L IE+ + ++L L+ K
Sbjct: 145 RELRTQLDELNGEKSQLLIERDSIDEDLQRLRAK 178
>gi|395540625|ref|XP_003772253.1| PREDICTED: keratin, type II cytoskeletal 6A [Sarcophilus harrisii]
Length = 561
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK-VK 106
+ PTI + +E+ ++K LN++ A +I+ V+ L+ L+ ++E T K+ ++
Sbjct: 145 IDPTIQRVKTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVKQNLE 204
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I +R LDR + K +L E R + D++ D KNK
Sbjct: 205 PMFEAYINQLRGQLDRITREKGSLDSELRNMQDQVEDFKNK 245
>gi|353526233|sp|P90900.2|IFA4_CAEEL RecName: Full=Intermediate filament protein ifa-4; AltName:
Full=Cel IF A4; AltName: Full=Intermediate filament
protein A4; Short=IF-A4
Length = 577
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
+T + S G+S +T ++ E P G S SR +EK E+ LND
Sbjct: 22 STATYGSTISSGTS--RTLKITEIGGSNLTSGMSPFGGHAASAIRESRTREKKEMSELND 79
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ +E L + + VK E E+ + + ++
Sbjct: 80 RLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDLIADSDKERA 139
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + ++L++EL + +NK
Sbjct: 140 QLEDQIKKLVEELNNYRNK 158
>gi|49257704|gb|AAH74454.1| LOC397994 protein [Xenopus laevis]
Length = 843
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + H+ + ++ E+E+ +
Sbjct: 68 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKHSG-YSQLGEVYEQEMRE 126
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 127 LRANLELLGHDKAQIVLDSEHLEEDLQRLKER 158
>gi|426359141|ref|XP_004046843.1| PREDICTED: neurofilament medium polypeptide isoform 1 [Gorilla
gorilla gorilla]
Length = 915
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|431917687|gb|ELK16952.1| Vimentin [Pteropus alecto]
Length = 466
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 2 SGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIIS-----R 56
+GRS ++P G ++++S VR P+ ++ L+ I + R
Sbjct: 48 TGRSLYASSPG-------GVYAKRSSAVRLWSGAPRVRTLQDSVDFSLADAINTEFKNTR 100
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+ ++
Sbjct: 101 TNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMREL 157
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 158 RRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|410976836|ref|XP_003994819.1| PREDICTED: neurofilament heavy polypeptide [Felis catus]
Length = 1044
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+ ++
Sbjct: 92 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRS-AMGELYEREVREM 150
Query: 117 RKALDRESSSKSALAIEKRRLLDELLDLKNK 147
R A+ R +++ L +E+ LL+++ ++ +
Sbjct: 151 RGAVLRLGAARGQLRLEQEHLLEDIAHVRQR 181
>gi|353231658|emb|CCD79013.1| putative uracil-DNA glycosylase [Schistosoma mansoni]
Length = 793
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQK-LQNDKASLEYSLYSIEESH 98
++ PR S +ISR +EK EL++LNDR A YIE + K + N + S L + S
Sbjct: 30 TKSPRSSS-FDSLVISRLEEKEELQHLNDRFANYIEHLHKNIFNKEFSGHIDL--LTNSL 86
Query: 99 TTEFKKVKAASEKEIEDIRKALDRES 124
E A E+E +R+ L++ S
Sbjct: 87 KNEMDDYVKAFSNEVELLRRNLNKTS 112
>gi|449492211|ref|XP_004175548.1| PREDICTED: LOW QUALITY PROTEIN: vimentin [Taeniopygia guttata]
Length = 459
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 10 TPAKTPSAS-RGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTI-----ISRRQEKNEL 63
+ A+ SAS G + +T+ VR P P L+ I +R EK EL
Sbjct: 42 SSARYVSASPGGVYTTKTTSVRLRSSMP-PMRLHDSVDFSLADAINTEFKANRTNEKVEL 100
Query: 64 KNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRE 123
+ LNDR A YI+ V+ L+ L L ++ T+ ++ E+E+ ++R+ +D+
Sbjct: 101 QELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTS---RLGDLYEEEMRELRRQVDQL 157
Query: 124 SSSKSALAIEKRRLLDELLDLKNK 147
++ K+ + +E+ L D+++ L+ K
Sbjct: 158 TNDKARVEVERDNLADDIMRLREK 181
>gi|410924057|ref|XP_003975498.1| PREDICTED: vimentin-like [Takifugu rubripes]
Length = 452
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
I +R EK ++++LNDR A YIE V+ L+ L L +E+ +V E E
Sbjct: 82 ITNRTNEKAQMQSLNDRFASYIEKVRFLEQQNKIL---LAELEQLRGKGTSRVGDLYEDE 138
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ D+R+ +D+ ++ K+ + + + L+D++ L+ K
Sbjct: 139 MRDLRRQVDQLTNEKARVDVHRDNLVDDIERLREK 173
>gi|147906154|ref|NP_001081679.1| neurofilament, medium polypeptide [Xenopus laevis]
gi|2062609|gb|AAB53389.1| middle molecular weight neurofilament protein NF-M(1) [Xenopus
laevis]
Length = 897
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + H+ + ++ E+E+ +
Sbjct: 83 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKHSG-YSQLGEVYEQEMRE 141
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 142 LRANLELLGHDKAQIVLDSEHLEEDLQRLKER 173
>gi|3201513|emb|CAA11446.1| intermediate filament protein D1 [Branchiostoma lanceolatum]
Length = 620
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 41 QPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
Q + L + R +K+EL LNDR A +IE V+ L+N LE L +++ +
Sbjct: 107 QASQALVALGQVRVERTGDKDELVGLNDRFATFIEKVRFLENQNRKLEMKLKMVQQKGSG 166
Query: 101 EFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ A E E+ IR+ ++ ++ + +L E+ L E+ +LK +
Sbjct: 167 --PDLGAMWEAELRQIRQLIEVVNTERGSLEAERDGLSGEVKELKTR 211
>gi|1494978|emb|CAA63071.1| intermediate filament protein [Ascaris suum]
Length = 526
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK E++ LNDRL YI+ V+KL+ L L + + ++K ++ D R
Sbjct: 21 KEKKEMQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGRWGKDTSEIKIQY-SDLRDAR 79
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K +D + K+ + ++ RL D+L +L+N+
Sbjct: 80 KEIDDGARRKAEIDVKVARLRDDLAELRNR 109
>gi|395739502|ref|XP_003780568.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament medium polypeptide
[Pongo abelii]
Length = 841
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|148672090|gb|EDL04037.1| RIKEN cDNA 4732456N10 [Mus musculus]
Length = 545
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 147 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 205
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ +S L E + + D + D KNK
Sbjct: 206 LRRQLECLGGERSRLETELKSMQDVVEDFKNK 237
>gi|317418884|emb|CBN80922.1| Type II keratin E3 [Dicentrarchus labrax]
Length = 480
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI + R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + +
Sbjct: 87 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTTRSNIDS 145
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E R + + D K K
Sbjct: 146 MFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKRK 185
>gi|33186832|tpe|CAE00502.1| TPA: desmin [Takifugu rubripes]
Length = 451
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEF-KKVKAASEKEI 113
+R EK EL++LNDR A YIE V+ L+ A+L IE+ E +V E+E+
Sbjct: 78 TRTNEKAELQHLNDRFASYIEKVRFLEQQNAAL---TVEIEKLRNREGPGRVAEMYEEEM 134
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ ++ S+ ++ + +E+ L D+L L+ +
Sbjct: 135 RELRRQIEALSNQRARVEVERDNLADDLQKLRGR 168
>gi|426224448|ref|XP_004006382.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 7
[Ovis aries]
Length = 453
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 18 SRGSSSRQTSEVREEPPQPQPQSQPPRP-GSPLSPTIIS------------------RRQ 58
RG+ R + + PQ +S P G+ +S I+ R++
Sbjct: 19 GRGAPVRXLAGLGASRPQVAARSSYGAPVGTGISAVTINQSLLTPLQVDIDPSIQQVRQE 78
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
E+ ++K LN++ A +I+ V+ L+ LE ++E + + ++ E +I +RK
Sbjct: 79 EREQIKTLNNKFASFIDKVRFLEQQNKLLETKWTLLQEQKSAKSNRLPGIFEAQIAGLRK 138
Query: 119 ALDRESSSKSALAIEKRRLLDELLDLKNK 147
L+ L +E R + D + D KNK
Sbjct: 139 QLEALQLDGGRLEVELRNMQDVVEDFKNK 167
>gi|432875086|ref|XP_004072667.1| PREDICTED: neurofilament heavy polypeptide-like [Oryzias latipes]
Length = 781
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++RR EK L+ LNDR A YI+ V+ L+ +LE ++ +S V E+E+
Sbjct: 53 MTRRSEKEILQALNDRFAGYIDKVRNLEMHNRNLEAEAAALRQSQAGRT-SVGEHYEREL 111
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R L + + K+ +E L +++ L+ +
Sbjct: 112 GDLRGLLQQLTGEKARAVMEHDHLEEDIQHLRGR 145
>gi|426220048|ref|XP_004004229.1| PREDICTED: neurofilament medium polypeptide [Ovis aries]
Length = 843
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 30 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 88
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 89 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 122
>gi|256083541|ref|XP_002578001.1| uracil-DNA glycosylase [Schistosoma mansoni]
Length = 1088
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQK-LQNDKASLEYSLYSIEESH 98
++ PR S +ISR +EK EL++LNDR A YIE + K + N + S L + S
Sbjct: 30 TKSPRSSS-FDSLVISRLEEKEELQHLNDRFANYIEHLHKNIFNKEFSGHIDL--LTNSL 86
Query: 99 TTEFKKVKAASEKEIEDIRKALDRES 124
E A E+E +R+ L++ S
Sbjct: 87 KNEMDDYVKAFSNEVELLRRNLNKTS 112
>gi|397506190|ref|XP_003823614.1| PREDICTED: neurofilament medium polypeptide isoform 2 [Pan
paniscus]
Length = 698
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A E+EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYEQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|143811427|sp|O77788.3|NFM_BOVIN RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament 3; AltName: Full=Neurofilament
triplet M protein
Length = 926
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +++ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQIQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|431901209|gb|ELK08275.1| Neurofilament medium polypeptide [Pteropus alecto]
Length = 847
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|226510657|gb|ACO59904.1| keratin-like protein [Ctenopharyngodon idella]
Length = 370
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I I R QEK ++K LN+R A +I+ V+ L+ LE + +S+ ++ T + A
Sbjct: 47 IDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQNQTATRSNIDA 105
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L + + + D KNK
Sbjct: 106 MFEAYISNLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNK 145
>gi|116875779|ref|NP_001070920.1| desmin [Danio rerio]
gi|116284183|gb|AAI24513.1| Zgc:154009 [Danio rerio]
gi|182889758|gb|AAI65598.1| Zgc:154009 protein [Danio rerio]
Length = 474
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+R EK EL++LNDR A YIE V+ L QN +E +E E ++ E E
Sbjct: 106 TRTNEKAELQHLNDRFANYIEKVRMLEQQNQVLGVE-----VERLRGREPTRIADLYEDE 160
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ ++R+ ++ ++ +S + +E+ L D+L LK
Sbjct: 161 MRELRREVEVVTNHRSRVEVERDNLADDLQKLK 193
>gi|3201497|emb|CAA11448.1| intermediate filament protein D1 [Branchiostoma floridae]
Length = 620
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L + R +K+EL LNDR A +IE V+ L+N LE L +++ + + A
Sbjct: 112 ALGQVRVERTGDKDELVGLNDRFASFIEKVRFLENQNRKLEMKLKMVQQKGSG--PNLGA 169
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E E+ IR+ ++ ++ + +L E+ L E+ +LK +
Sbjct: 170 MWEAELRQIRQLIEVVNTERGSLEAERDGLSGEVKELKTR 209
>gi|114051856|ref|NP_001039876.1| keratin, type II cytoskeletal 7 [Bos taurus]
gi|122135340|sp|Q29S21.1|K2C7_BOVIN RecName: Full=Keratin, type II cytoskeletal 7; AltName:
Full=Cytokeratin-7; Short=CK-7; AltName: Full=Keratin-7;
Short=K7; AltName: Full=Type-II keratin Kb7
gi|88758660|gb|AAI13215.1| Keratin 7 [Bos taurus]
gi|296487869|tpg|DAA29982.1| TPA: keratin, type II cytoskeletal 7 [Bos taurus]
Length = 466
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 49 LSPTIISRRQEKNE-LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I RQE+ E +K LN++ A +I+ V+ L+ LE ++E + + ++
Sbjct: 81 IDPSIQQVRQEEREQIKTLNNKFASFIDKVRFLEQQNKLLETKWALLQEQKSAKSNRLPG 140
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E +I +RK L+ L +E R + D + D KNK
Sbjct: 141 IFEAQIAGLRKQLEALQLDGGRLEVELRNMQDVVEDFKNK 180
>gi|355779580|gb|EHH64056.1| Neurofilament medium polypeptide [Macaca fascicularis]
Length = 919
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|440896108|gb|ELR48133.1| Keratin, type II cytoskeletal 7 [Bos grunniens mutus]
Length = 466
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 49 LSPTIISRRQEKNE-LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I RQE+ E +K LN++ A +I+ V+ L+ LE ++E + + ++
Sbjct: 81 IDPSIQQVRQEEREQIKTLNNKFASFIDKVRFLEQQNKLLETKWALLQEQKSAKSNRLPG 140
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E +I +RK L+ L +E R + D + D KNK
Sbjct: 141 IFEAQIAGLRKQLEALQLDGGRLEVELRNMQDVVEDFKNK 180
>gi|17386168|gb|AAL38630.1|AF447708_1 vimentin [Daboia russellii]
Length = 459
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L ++ T+ + E+E+
Sbjct: 94 NRTNEKAELQELNDRFANYIDKVRFLEQQNKILVAELEQLKGKGTSRLGDI---YEEEMR 150
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L +++L L+ K
Sbjct: 151 ELRRQVDQLTNDKARVEVERDNLAEDILRLREK 183
>gi|28189827|dbj|BAC56528.1| similar to desmin [Bos taurus]
Length = 182
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 6 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 62
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ LLD+L LK K
Sbjct: 63 LRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAK 97
>gi|441621552|ref|XP_004088755.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament medium polypeptide
[Nomascus leucogenys]
Length = 841
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 58 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 116
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 117 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 150
>gi|47224772|emb|CAG00366.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 29 VREEPPQPQPQSQPPRPGSP-------------LSPTIIS-------RRQEKNELKNLND 68
+R PP P S R G P L+ T + R EK +L+ LND
Sbjct: 36 LRAMPPSHGPVSAYRRVGRPSGAFSVMPAESLDLTQTSVVNNELKVIRTNEKEQLQGLND 95
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
R A +I+ V+ L+ LE L ++ + + E +V ++E++D+R ++ K+
Sbjct: 96 RFAMFIDKVRHLEQQNKGLELELATLRQRQS-EPSRVAQLYQQELKDLRSQVEELGRDKN 154
Query: 129 ALAIEKRRLLDELLDLKNK 147
+E+ + DEL L K
Sbjct: 155 RFLVERNNVEDELQRLNAK 173
>gi|55291|emb|CAA35803.1| unnamed protein product [Mus musculus]
Length = 466
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 DVRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|354467556|ref|XP_003496235.1| PREDICTED: neurofilament medium polypeptide [Cricetulus griseus]
gi|344235880|gb|EGV91983.1| Neurofilament medium polypeptide [Cricetulus griseus]
Length = 842
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQVS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|4468665|emb|CAB38181.1| cytoplasmic intermediate filament protein [Phoronis ijimai]
Length = 631
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%)
Query: 26 TSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
T EV PQ+ S ++ + +R EK ++++LN+R A YIE V+ L+
Sbjct: 67 TREVSYGVHSASPQAMNNVSSSSVNTILTNRSVEKKDMQDLNERFAGYIEKVRFLEAQNK 126
Query: 86 SLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
L L + KK+K E E++ ++ D L I+ RL D L
Sbjct: 127 KLAAELTDLRSKWGEPSKKIKDMYEAELKQQKQLYDDSVKDNEKLRIQVDRLTDNL 182
>gi|348515631|ref|XP_003445343.1| PREDICTED: desmin-like [Oreochromis niloticus]
Length = 475
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA------- 107
+R EK EL++LNDR A YIE V+ L+ A+L T E +K++
Sbjct: 102 TRTNEKAELQHLNDRFASYIEKVRFLEQQNAAL-----------TVEIEKLRGREGPGRV 150
Query: 108 --ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
E+E+ ++R+ ++ ++ ++ + +E+ L D+L LK
Sbjct: 151 AELYEEEMRELRRQIEALTNQRARVEVERDNLADDLQKLK 190
>gi|194380840|dbj|BAG58573.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|109735018|gb|AAI18025.1| RIKEN cDNA 4732456N10 gene [Mus musculus]
Length = 538
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 140 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 198
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ +S L E + + D + D KNK
Sbjct: 199 LRRQLECLGGERSRLETELKSMQDVVEDFKNK 230
>gi|2764976|emb|CAA68255.1| intermediate filament protein [Lineus sanguineus]
Length = 602
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R++EK ++++LN+RLA YIE V+ L+ L L + E VKA E E+
Sbjct: 95 NRKREKKDMQDLNERLASYIEKVRFLEAQNKKLGSELDDLRAKWGKETAAVKAVYEGELA 154
Query: 115 DIRKALDRESSSKSALAI 132
RK LD +S L +
Sbjct: 155 QARKLLDESEKERSRLEL 172
>gi|269914154|ref|NP_808385.2| uncharacterized protein LOC239673 [Mus musculus]
Length = 538
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 140 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 198
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ +S L E + + D + D KNK
Sbjct: 199 LRRQLECLGGERSRLETELKSMQDVVEDFKNK 230
>gi|26324736|dbj|BAC26122.1| unnamed protein product [Mus musculus]
Length = 538
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 140 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 198
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ +S L E + + D + D KNK
Sbjct: 199 LRRQLECLGGERSRLETELKSMQDVVEDFKNK 230
>gi|185132221|ref|NP_001118215.1| type II keratin E1 [Oncorhynchus mykiss]
gi|15028976|emb|CAC45056.1| type II keratin E1 [Oncorhynchus mykiss]
Length = 618
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 48 PLSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
+ P I R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT +
Sbjct: 180 AIDPNIQTVRTQEKEQIKGLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTTRSNID 238
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
A E I ++R+ LD K L E + + D KNK
Sbjct: 239 AMFEAYIANLRRQLDGLGGEKVKLEGELMNMQGLVEDFKNK 279
>gi|32452091|emb|CAD38119.1| keratin type Is [Acipenser baerii]
Length = 456
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQ--NDKASLEYSLYSIEESHTTEF 102
PG S ++ EK ++NLNDRLA Y+E V+ L+ N K L+ Y E SH
Sbjct: 112 PGGCYSQDSMTNLNEKATMQNLNDRLASYLEKVRSLEAANSKLELQIRQY-YEHSHPV-V 169
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSALAIE 133
++ +A K IE+++ ++R + S + ++
Sbjct: 170 QRDYSAYWKTIEELKDKINRATVDNSRILLQ 200
>gi|395842405|ref|XP_003794008.1| PREDICTED: neurofilament medium polypeptide [Otolemur garnettii]
Length = 841
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|6980088|gb|AAF34720.1|AF229168_1 inner-ear cytokeratin [Rana catesbeiana]
Length = 529
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I + R++EK ++K LN++ A +I+ V+ L+ LE ++ + + +
Sbjct: 122 IDPSIQVVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLETKWELLQNQKSAKASNIGP 181
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E R + D + D KNK
Sbjct: 182 MFEAYISNLRRQLDSLVNDKGRLDGELRNMQDLVEDFKNK 221
>gi|12275186|emb|CAC22331.1| intermediate filament protein type III [Lampetra fluviatilis]
Length = 473
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ +L + ++ T +V ++E+
Sbjct: 103 TRTNEKVELQELNDRFASYIDKVRFLEQQNKALTVEITQLKGREPT---RVDGIYDQELR 159
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
++R +DR + K+ +E+ LLD+L
Sbjct: 160 ELRLQVDRLTGEKARGDLERANLLDDL 186
>gi|45360995|ref|NP_989134.1| desmin, gene 1 [Xenopus (Silurana) tropicalis]
gi|38511808|gb|AAH61361.1| desmin, gene 1 [Xenopus (Silurana) tropicalis]
gi|89272455|emb|CAJ82686.1| desmin [Xenopus (Silurana) tropicalis]
Length = 458
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR YIE V+ L+ L + ++ T +V E+E+
Sbjct: 92 TRTNEKVELQELNDRFVNYIEKVRYLEQQNQILVAEVNKLKGKEPT---RVNELYEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R+ +D ++ +S + +E+ L+D+L LK
Sbjct: 149 ELRRQVDLATNQRSRVEVERDNLVDDLQKLK 179
>gi|89886345|ref|NP_001034927.1| neurofilament, light polypeptide b [Danio rerio]
gi|89130520|gb|AAI14233.1| Neurofilament, light polypeptide [Danio rerio]
Length = 579
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR +IE V L+ +LE L + + H E +++ E+E +
Sbjct: 80 RTQERAQLQDLNDRFVSFIERVHGLELQNRALESELLLLRQRHC-EPSRLRGLYEQEARE 138
Query: 116 IRKALDRESSSKSALAIEKRRLLDELL 142
+R A+D + A A E+R L+E L
Sbjct: 139 LRAAVDEARRERQA-AQERRDRLEEAL 164
>gi|383617669|gb|AFH41832.1| desmin [Sternopygus macrurus]
Length = 470
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+R EK EL++LNDR A YIE V+ L QN ++E +E E ++ ++E
Sbjct: 99 TRTNEKAELQHLNDRFASYIEKVRFLEQQNQALAVE-----VERMRGREPTRIAEMYDEE 153
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ +R +D ++ ++ + IE+ L D+L LK
Sbjct: 154 MHQLRMQVDALTNQRARVEIERDNLADDLQKLK 186
>gi|297299103|ref|XP_001106972.2| PREDICTED: neurofilament medium polypeptide-like isoform 2 [Macaca
mulatta]
Length = 882
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|66910288|gb|AAH96868.1| LOC566027 protein, partial [Danio rerio]
Length = 503
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR +IE V L+ +LE L + + H E +++ E+E +
Sbjct: 80 RTQERAQLQDLNDRFVSFIERVHGLELQNRALESELLLLRQRHC-EPSRLRGLYEQEARE 138
Query: 116 IRKALDRESSSKSALAIEKRRLLDELL 142
+R A+D + A A E+R L+E L
Sbjct: 139 LRAAVDEARRERQA-AQERRDRLEEAL 164
>gi|449514738|ref|XP_004174707.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B1 [Taeniopygia guttata]
Length = 616
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKA 119
K EL+ LN LA+YI+ V+ L+ + ++L + EE E +KA E E+ D R+A
Sbjct: 61 KEELRQLNVPLARYIDKVRILETEYSALLLQVTQREEVRGREVTGLKAIYEAELADARRA 120
Query: 120 LDRESSSKSALAIEKRRL 137
LD + ++ L IE +L
Sbjct: 121 LDDTARERAKLQIELGKL 138
>gi|18859241|ref|NP_571129.1| peripherin [Danio rerio]
gi|2511773|gb|AAC34934.1| plasticin [Danio rerio]
Length = 435
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 14 TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPT------------IISRRQEKN 61
TPS S R TS + P + +S P P + +R EK
Sbjct: 16 TPSVSSRIGGRYTSSIPSRPVDFRSRSSAPAPRLSYDKVDFSLAEAVNQEFLATRSNEKR 75
Query: 62 ELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALD 121
EL+ LNDR A +IE V+ L+ + L L +E ++ ++E+ ++R+ L+
Sbjct: 76 ELQELNDRFASFIEKVRYLEQQNSRLTQELGQFKEQQQGPSGRLGDLCQQEMRELRRQLE 135
Query: 122 RESSSKSALAIEKRRLLDELLDLKNK 147
+ + +E+ L +++ LK +
Sbjct: 136 LMGKDRDQMQVERDNLAEDVALLKQR 161
>gi|148342538|gb|ABQ59047.1| NEFM protein [Homo sapiens]
Length = 877
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|28958135|gb|AAH47248.1| LOC397994 protein, partial [Xenopus laevis]
Length = 716
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + H+ + ++ E+E+ +
Sbjct: 83 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKHSG-YSQLGEVYEQEMRE 141
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 142 LRANLELLGHDKAQIVLDSEHLEEDLQRLKER 173
>gi|2959458|dbj|BAA25136.1| desmin [Sus scrofa]
Length = 185
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 103 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 159
Query: 113 IEDIRKALDRESSSKSALAIEKRRLL 138
+ ++R+ ++ ++ ++ + +E+ LL
Sbjct: 160 LRELRRQVEVLTNQRARVDVERDNLL 185
>gi|432863463|ref|XP_004070079.1| PREDICTED: synemin-like [Oryzias latipes]
Length = 1012
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEK---EIED 115
EK +L+ LN RLAQY+ Q+L+ + A L E SH + KK + E+ D
Sbjct: 11 EKQQLQELNSRLAQYLSRTQQLEQENA-----LLITEISHLKQVKKTPEWQQNYRAEMHD 65
Query: 116 IRKALDRESSSKSALAIEKRRLLDEL 141
+R+ +++ S KS +E+ +L EL
Sbjct: 66 LRRMVEQLSFEKSQAELEREKLWREL 91
>gi|320089554|ref|NP_001188486.1| intermediate filament protein-like [Danio rerio]
Length = 388
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 1 MSGRSKRGATPAKTPSASRG--SSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQ 58
+S R + + T SRG SSSR +R EP Q QS + + + R Q
Sbjct: 11 LSRRWEDFQSSTSTYRISRGPLSSSRWA--MRLEPLQRWDQSDLSQASLVNAELLDLRAQ 68
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
E+ +L LN+R A YIE V+ L+ +L L ++ + +V+ +E+ +R+
Sbjct: 69 EREQLVGLNNRFASYIEKVRHLEQQNRALLLQLEALRRRQSQP-SRVQQLYLQEVRGLRE 127
Query: 119 ALDRESSSKSALAIEKRRLLD 139
L +E+ +K+ + ++ +L D
Sbjct: 128 QLHQEAQNKARMEVQMEKLRD 148
>gi|90077210|dbj|BAE88285.1| unnamed protein product [Macaca fascicularis]
Length = 242
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 154
>gi|126324953|ref|XP_001380169.1| PREDICTED: neurofilament heavy polypeptide [Monodelphis domestica]
Length = 1027
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK L+ LNDR A YI+ V++L+ LE S+ + + A E+EI ++
Sbjct: 139 RNEKELLQALNDRFAGYIDKVRQLELQNRQLEGEAASLRQQQAGRS-AMGALYEREIREM 197
Query: 117 RKALDRESSSKSALAIEKRRLLDEL 141
R A R + + L +E RLL+++
Sbjct: 198 RAAALRLGAEQGQLRLEHERLLEDI 222
>gi|1881764|gb|AAC34932.1| plasticin [Danio rerio]
Length = 442
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 14 TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPT------------IISRRQEKN 61
TPS S R TS + P + +S P P + +R EK
Sbjct: 16 TPSVSSRIGGRYTSSIPSRPVDFRSRSSAPAPRLSYDKVDFSLAEAVNQEFLATRSNEKR 75
Query: 62 ELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALD 121
EL+ LNDR A +IE V+ L+ + L L +E ++ ++E+ ++R+ L+
Sbjct: 76 ELQELNDRFASFIEKVRYLEQQNSRLTQELGQFKEQQQGPSGRLGDLCQQEMRELRRQLE 135
Query: 122 RESSSKSALAIEKRRLLDELLDLKNK 147
+ + +E+ L +++ LK +
Sbjct: 136 LMGKDRDQMQVERDNLAEDVALLKQR 161
>gi|355569532|gb|EHH25452.1| Neurofilament medium polypeptide, partial [Macaca mulatta]
Length = 861
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 38 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 96
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 97 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 130
>gi|1848063|emb|CAA50182.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
Length = 592
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 45 PGSPLSP-------TI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
GS LSP TI SR +EK E+ +LNDRLA YIE V+ L+ L L ++
Sbjct: 65 AGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDALRS 124
Query: 97 SHTTEFKKVKAASEKE-IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ E E + D +K +D + + + + +++ DEL +++ K
Sbjct: 125 KWGKDTHNIRNMYEGELVVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRK 176
>gi|297529|emb|CAA29127.1| NF-M [Mus musculus]
Length = 849
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 95 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 153
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 154 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 187
>gi|63101330|gb|AAH95599.1| Prph protein [Danio rerio]
Length = 442
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 14 TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPT------------IISRRQEKN 61
TPS S R TS + P + +S P P + +R EK
Sbjct: 16 TPSVSSRIGGRYTSSIPSRPVDFRSRSSAPAPRLSYDKVDFSLAEAVNQEFLATRSNEKR 75
Query: 62 ELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALD 121
EL+ LNDR A +IE V+ L+ + L L +E ++ ++E+ ++R+ L+
Sbjct: 76 ELQELNDRFASFIEKVRYLEQQNSRLTQELGQFKEQQQGPSGRLGDLCQQEMRELRRQLE 135
Query: 122 RESSSKSALAIEKRRLLDELLDLKNK 147
+ + +E+ L +++ LK +
Sbjct: 136 LMGKDRDQMQVERDNLAEDVALLKQR 161
>gi|449488687|ref|XP_004175950.1| PREDICTED: keratin, type II cytoskeletal 4-like [Taeniopygia
guttata]
Length = 555
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ E+K LND+ A +I+ V+ L+ LE + L + T + + E I
Sbjct: 144 RTQEREEIKKLNDKFASFIDKVRFLEQQNRVLETKWKLLQEQGGTGTGSRNLDPFFETYI 203
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD SS K L E + D + D K K
Sbjct: 204 SGLRKQLDCLSSEKLQLETELKSFQDMVEDFKTK 237
>gi|268577317|ref|XP_002643640.1| Hypothetical protein CBG16384 [Caenorhabditis briggsae]
Length = 581
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 53/128 (41%)
Query: 20 GSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQK 79
GS SR V E P + S +R +EK E+ LNDRLA YIE +
Sbjct: 31 GSGSRVLKIVTEMSSSSVASGLSPYGQNAASTIRDNREREKKEIMELNDRLAGYIEKGRF 90
Query: 80 LQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLD 139
L+ LE L ++ VK E EI + + + K A E R+L D
Sbjct: 91 LEGQNRRLEADLRMLQGRFGKRTGSVKVMYELEITTAQTVVKQTEKDKEAAGKEIRQLQD 150
Query: 140 ELLDLKNK 147
+L + + K
Sbjct: 151 QLDEFRKK 158
>gi|350592300|ref|XP_003359086.2| PREDICTED: neurofilament medium polypeptide-like isoform 1 [Sus
scrofa]
Length = 843
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|348506200|ref|XP_003440648.1| PREDICTED: synemin-like [Oreochromis niloticus]
Length = 1024
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK-KVKAASEKEIEDIR 117
EK++L+ LN RLAQY+ ++L+ + A L + + + TT ++ K +A E++D+R
Sbjct: 11 EKHQLQELNSRLAQYLSRTKQLEQENAHLIAEINKLRQVRTTGWETKYRA----EMQDLR 66
Query: 118 KALDRESSSKSALAIEKRRLLDEL 141
+ + + S KS +E+ +L EL
Sbjct: 67 RMVGQLSFEKSQAEMEREKLWREL 90
>gi|387019837|gb|AFJ52036.1| Vimentin [Crotalus adamanteus]
Length = 457
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L ++ T+ + E+E+
Sbjct: 92 NRTNEKVELQELNDRFANYIDKVRFLEQQNKILVAELEQLKGKGTSRLGDI---YEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L +++L L+ K
Sbjct: 149 ELRRQVDQLTNEKARVEVERDNLAEDILRLREK 181
>gi|66911943|gb|AAH97231.1| Si:dkey-33c12.3 protein [Danio rerio]
Length = 435
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 1 MSGRSKRGATPAKTPSASRG--SSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQ 58
+S R + + T SRG SSSR +R EP Q QS + + + R Q
Sbjct: 58 LSRRWEDYQSSTSTYRISRGPLSSSRWA--MRLEPLQRWDQSDLSQASLVNAELLDLRAQ 115
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
E+ +L LN+R A YIE V+ L+ +L L ++ + +V+ +E+ +R+
Sbjct: 116 EREQLVGLNNRFASYIEKVRHLEQQNRALLLQLEALRRRQSQP-SRVQQLYLQEVRGLRE 174
Query: 119 ALDRESSSKSALAIEKRRLLD 139
L +E+ +K+ + ++ +L D
Sbjct: 175 QLHQEAQNKARMEVQMEKLRD 195
>gi|324507503|gb|ADY43180.1| Lamin-1 [Ascaris suum]
Length = 511
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR EK L LN RLA Y+E V L+ + L E EF K+ A E+ I
Sbjct: 5 SRPSEKEMLSGLNVRLAAYLEEVHLLELNNEVLHLRALETETKKKEEFDKMAANYERTIA 64
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R ++ + + K L IEK + E+ L NK
Sbjct: 65 EMRSSIAQMAKEKKRLGIEKEVAVAEIEQLHNK 97
>gi|124504386|gb|AAI28565.1| Nefm protein [Mus musculus]
Length = 846
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 92 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 150
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 151 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 184
>gi|395540664|ref|XP_003772272.1| PREDICTED: keratin, type II cytoskeletal 75-like [Sarcophilus
harrisii]
Length = 525
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +SI + H T + E I
Sbjct: 134 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSILQDHKTTKANIDPLFETYISS 192
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ + L E + + D + D KNK
Sbjct: 193 LRRQLECLGGERGRLETELKSMQDVVEDFKNK 224
>gi|111185724|gb|AAI19603.1| Nefm protein [Mus musculus]
Length = 847
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 93 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 151
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 152 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 185
>gi|432098416|gb|ELK28215.1| Neurofilament medium polypeptide [Myotis davidii]
Length = 845
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|313244677|emb|CBY15408.1| unnamed protein product [Oikopleura dioica]
Length = 565
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 46 GSPLSPTIISRR-QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+P+ P +S+R EK ELK LN+R A+Y++ VQ L+ + LE L
Sbjct: 86 AAPIGPQFVSQRTNEKEELKTLNNRFARYLKRVQDLERENKILEAQL 132
>gi|417401426|gb|JAA47599.1| Putative nuclear envelope protein lamin intermediate filament
superfamily [Desmodus rotundus]
Length = 466
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 DLRRQVDQLTNDKARVEVERDNLAEDVMRLREK 188
>gi|312071044|ref|XP_003138426.1| hypothetical protein LOAG_02841 [Loa loa]
gi|307766408|gb|EFO25642.1| intermediate filament protein ifa-1 [Loa loa]
Length = 573
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR +EK E+ +LNDRLA YIE V+ L+ L L + + +K E EI
Sbjct: 63 SREREKKEMSDLNDRLATYIEKVRFLEAQNRKLAADLDLLRGKWGKDTFNIKQMYEGEIS 122
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D R+ ++ + L + ++ DEL D + +
Sbjct: 123 DARELINDTVKQRDDLEKQIHKMQDELSDYRKR 155
>gi|146345468|sp|P08553.4|NFM_MOUSE RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament 3; AltName: Full=Neurofilament
triplet M protein
Length = 848
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|74216596|dbj|BAE37734.1| unnamed protein product [Mus musculus]
Length = 630
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|2959456|dbj|BAA25135.1| desmin [Bos taurus]
Length = 184
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 102 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 158
Query: 113 IEDIRKALDRESSSKSALAIEKRRLL 138
+ ++R+ ++ ++ ++ + +E+ LL
Sbjct: 159 LRELRRQVEVLTNQRARVDVERDNLL 184
>gi|291406071|ref|XP_002719424.1| PREDICTED: keratin 38-like [Oryctolagus cuniculus]
Length = 456
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 2 SGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPG-SPLSPTIISRRQEK 60
S R + G TP PS S R P P P G + EK
Sbjct: 51 SNRVRVGNTPLGRPSLCLPQSCRTAC------PLPGTCHIPGNVGICGAYGEVTLNGHEK 104
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
++ LNDRLA Y+E V++L+ + A LE ++ + H T
Sbjct: 105 ETMQFLNDRLANYLEKVRQLERENAELETTIRETSKCHET 144
>gi|268566151|ref|XP_002639648.1| C. briggsae CBR-LMN-1 protein [Caenorhabditis briggsae]
Length = 565
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR QEK+ L +LN RLAQYI++ ++L+ + L+ + IE E + E E
Sbjct: 40 SRLQEKDHLTSLNSRLAQYIDVFRQLEQENNRLQVQIRDIEVVEKKEKSNLADRFEAEKA 99
Query: 115 DIRKALD 121
+R+ALD
Sbjct: 100 RLRRALD 106
>gi|348534379|ref|XP_003454679.1| PREDICTED: keratin, type I cytoskeletal 17-like [Oreochromis
niloticus]
Length = 425
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK ++NLNDRLA Y+E V+ L+ A LE + E T + + EK IED+RK
Sbjct: 69 EKVTMQNLNDRLASYLEKVRSLETSNAQLERQIREWYEKQTPTVRDY-SKYEKIIEDLRK 127
Query: 119 --ALDRESSSKSALAIEKRRL 137
L + +++ L I+ RL
Sbjct: 128 KIGLATQDNARLMLQIDNARL 148
>gi|297272993|ref|XP_001105771.2| PREDICTED: keratin, type I cuticular Ha8-like [Macaca mulatta]
Length = 496
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 36 PQPQSQPPRPGSPLSPTIIS----------RRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
P + P PG+ P I EK ++ LNDRLA Y+E V++L+ + A
Sbjct: 156 PTCHNACPLPGTCHIPGNIGICGAYGENTLNGHEKETMQFLNDRLANYLEKVRQLERENA 215
Query: 86 SLEYSLYSIEESHTTEFKKVKAASEKEIEDI--------RKALDRESSSKSALAIEKRRL 137
LE +L + H + SE+ + + +K LD + +K+ L ++ L
Sbjct: 216 ELEATLLERSKCHESTVCPDXLESERSLRQLVEADQCGTQKLLDDATLAKADLEAQQESL 275
Query: 138 LDELLDLK 145
+E L LK
Sbjct: 276 KEEQLSLK 283
>gi|57335404|emb|CAH05050.1| type III vimentin [Protopterus aethiopicus]
Length = 464
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL++LNDR A YIE V+ L++ L L +E+ ++ E+E+
Sbjct: 93 TRTNEKAELQHLNDRFASYIEKVRSLESQNKIL---LVELEQLRGKGPSRISDIYEQELR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R +++ ++ K + +E+ L D+L LK K
Sbjct: 150 ELRLQVEQLTNDKDRVEVERDNLADDLQRLKEK 182
>gi|4761084|gb|AAD29247.1|AF101064_1 intermediate filament macrolin [Hirudo medicinalis]
Length = 649
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+R +EK ++++LN RL +YIE V+ L+ L+ + +++ E +V+A E ++
Sbjct: 99 FTRDREKKDMQDLNLRLTRYIETVRFLEAQNKQLDNEIKTLKAKWGKETSQVRAMFEADL 158
Query: 114 EDIRKALD-----------RESSSKSALAIEKRR 136
E+ R+ D R SS AL +EKRR
Sbjct: 159 EEARRIKDDLEKDTAKLEIRISSVIEALDVEKRR 192
>gi|444706036|gb|ELW47399.1| Vimentin [Tupaia chinensis]
Length = 554
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 212 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 268
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 269 ELRRQVDQLTNDKARVEVERYNLAEDIMRLREK 301
>gi|311255413|ref|XP_001927240.2| PREDICTED: keratin, type II cytoskeletal 79 [Sus scrofa]
Length = 535
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 2 SGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTII-----SR 56
SGR+ G + G+ RQ + P Q + +PL+ I R
Sbjct: 81 SGRNLGGFGLGRGAYVGLGAG-RQMFGLACPPGGIQQVTVNQSLLTPLNVEIDPEIRQVR 139
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE----SHTTEFKKVKAASEKE 112
QE+ ++K LND+ A +I+ V+ L+ LE ++E S T K ++ E
Sbjct: 140 TQEREQIKTLNDKFASFIDKVRFLEQQNKVLETKWVLLQEQGQKSGVTR-KNLEPLFENY 198
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
I ++R LD S + L E R + D + D KNK
Sbjct: 199 ISNLRMQLDSLQSERGRLDSELRNMQDLVEDFKNK 233
>gi|160011626|sp|Q29218.1|K1C20_PIG RecName: Full=Keratin, type I cytoskeletal 20; AltName:
Full=Cytokeratin-20; Short=CK-20; AltName:
Full=Keratin-20; Short=K20
Length = 107
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK +KNLNDRLA Y+E V+ L+ + E + ES+T + +A ++I+D+R
Sbjct: 8 EKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRN 67
Query: 119 ALDRES---SSKSALAIEKRRLLDELLDLK 145
+ R++ +++ L I+ +L E LK
Sbjct: 68 QI-RDAQLQNARCVLQIDNAKLAAEDFRLK 96
>gi|769822|emb|CAA88842.1| glial fibrillary acidic protein [Rattus norvegicus]
Length = 152
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDQLTTNSARLEVERDNLTQDLGTLRQK 152
>gi|345791918|ref|XP_543650.3| PREDICTED: keratin, type II cytoskeletal 75 [Canis lupus
familiaris]
Length = 531
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 140 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRANIEPMFEAYISN 198
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ ++ L E + + D + D KNK
Sbjct: 199 LRRQLECLGGERTRLESELKNMQDVVEDFKNK 230
>gi|226816196|dbj|BAH56637.1| type II keratin [Solea senegalensis]
Length = 484
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I + R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT ++
Sbjct: 100 IDPSIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTTRSNIEG 158
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E R + + D K K
Sbjct: 159 MFEAYIANLRRQLDGLGNEKVKLEGELRNMQGLVEDFKRK 198
>gi|26342124|dbj|BAC34724.1| unnamed protein product [Mus musculus]
Length = 848
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|390473584|ref|XP_002756877.2| PREDICTED: neurofilament medium polypeptide isoform 1 [Callithrix
jacchus]
Length = 741
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|281341800|gb|EFB17384.1| hypothetical protein PANDA_012408 [Ailuropoda melanoleuca]
Length = 336
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 23 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTARANIEPMFEAYISN 81
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD ++ L E + + D + D KNK
Sbjct: 82 LRRQLDCLGGERTRLETELKNMQDVVEDFKNK 113
>gi|112363107|ref|NP_032717.2| neurofilament medium polypeptide [Mus musculus]
gi|76573288|gb|ABA46749.1| neurofilament protein M [Mus musculus]
gi|148704014|gb|EDL35961.1| neurofilament 3, medium [Mus musculus]
gi|189442071|gb|AAI67193.1| Neurofilament, medium polypeptide [synthetic construct]
Length = 848
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|410956202|ref|XP_003984732.1| PREDICTED: neurofilament medium polypeptide [Felis catus]
Length = 861
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|351694635|gb|EHA97553.1| Desmin [Heterocephalus glaber]
Length = 383
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A L + ++ T ++ E+E
Sbjct: 15 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAVLASEVNRLKGREPT---RIAELYEEE 71
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ ++ ++ ++ + +E+ L+DEL LK K
Sbjct: 72 MRELRRQVEVLTNQRARVDVERDNLIDELQRLKAK 106
>gi|348587302|ref|XP_003479407.1| PREDICTED: neurofilament medium polypeptide-like [Cavia porcellus]
Length = 866
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|348041268|ref|NP_001011879.2| keratin [Takifugu rubripes]
Length = 553
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI + R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT +
Sbjct: 123 IDPTIQAIRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWKLLQEQTTSRSNIDM 181
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++RK LD K L + + D + D K +
Sbjct: 182 MFEAYIANLRKHLDNLGHEKVKLESDLHHMTDLVEDYKTR 221
>gi|363740208|ref|XP_415310.3| PREDICTED: neurofilament heavy polypeptide [Gallus gallus]
Length = 1016
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
R EK L+ LNDR A YIE V+ L QN + E + +++ + ++ A +E+
Sbjct: 141 RNEKELLQVLNDRFAGYIERVRALEQQNRALAAEAAALRQQQAGRSAMGELYA---RELR 197
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
D+R AL R + K L +E+ RL +++ L+ +
Sbjct: 198 DMRGALVRLGAEKGQLRLERARLAEDVAALRGR 230
>gi|327274472|ref|XP_003222001.1| PREDICTED: vimentin-like [Anolis carolinensis]
Length = 465
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 100 NRTNEKAELQELNDRFANYIDKVRFLEQQNKILLAELELLKGKGTS---RLGDLYEEEMR 156
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L D++L L+ K
Sbjct: 157 ELRRQVDQLTNDKARVEVERDNLSDDILRLREK 189
>gi|194208266|ref|XP_001915084.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament medium
polypeptide-like [Equus caballus]
Length = 850
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|124212|sp|P23729.1|IF3T_TORCA RecName: Full=Type III intermediate filament
gi|64402|emb|CAA35912.1| unnamed protein product [Torpedo californica]
Length = 458
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++R EK E+ LNDRLA +++ V+ L+ L L +E+ K+ E+E+
Sbjct: 92 VNRTNEKAEMIELNDRLANFLDKVRSLEQQNKML---LAELEQVKGKRPSKIGDLYEQEL 148
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R +D+ S+ KS + +E+ L D+L L+ K
Sbjct: 149 RELRLQIDQISNEKSRVEVERDNLADDLQKLREK 182
>gi|170596673|ref|XP_001902854.1| cytoplasmic intermediate filament protein [Brugia malayi]
gi|158589212|gb|EDP28296.1| cytoplasmic intermediate filament protein, putative [Brugia malayi]
Length = 321
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK E++ LNDRL YI+ V+KL+ L L + + ++K + D R
Sbjct: 52 KEKKEMQGLNDRLGNYIDRVKKLEEQNRKLVADLEELRGRWGKDTSEIKIQYSDSLRDAR 111
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K +D + K+ + ++ RL D+L +++++
Sbjct: 112 KEIDDGARRKAEIDVKVARLRDDLAEIRSR 141
>gi|405954851|gb|EKC22176.1| Intermediate filament tail domain-containing protein 1 [Crassostrea
gigas]
Length = 1071
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKL------QNDKASLEYSLYSIEESHTTEFKKVKA 107
+R QE+ EL+ +NDR YI+ V+ L Q D S S +E+ E +K+
Sbjct: 229 CNRTQEREELQKINDRFTSYIQKVRHLREQSGQQADTTSFIKSTKILED----EVATLKS 284
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDEL 141
EKE++++R ++ E + RRL++E+
Sbjct: 285 LYEKELDNVRLMVESE---------KNRRLMEEM 309
>gi|73994008|ref|XP_543237.2| PREDICTED: neurofilament medium polypeptide [Canis lupus
familiaris]
Length = 862
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|301757272|ref|XP_002914486.1| PREDICTED: neurofilament medium polypeptide-like [Ailuropoda
melanoleuca]
gi|281347202|gb|EFB22786.1| hypothetical protein PANDA_002374 [Ailuropoda melanoleuca]
Length = 862
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 95 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 153
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 154 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 187
>gi|348513887|ref|XP_003444472.1| PREDICTED: neurofilament light polypeptide-like [Oreochromis
niloticus]
Length = 639
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+++L++LNDR A +IE V++L+ +LE L + + H +E +++A E+E
Sbjct: 86 RTQERSQLQDLNDRFAGFIERVRELEQQNRALEAELLLLRQRH-SEPSRLRALYEQEARS 144
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R A+D + + A+ ++ RL L L+ +
Sbjct: 145 LRAAVDEARAEQQAVLSQRERLEQTLSALQGR 176
>gi|297299105|ref|XP_001106908.2| PREDICTED: neurofilament medium polypeptide-like isoform 1 [Macaca
mulatta]
Length = 701
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|194382388|dbj|BAG58949.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|90076256|dbj|BAE87808.1| unnamed protein product [Macaca fascicularis]
Length = 615
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|147904224|ref|NP_001087033.1| desmin, gene 1 [Xenopus laevis]
gi|50604005|gb|AAH77922.1| Des-prov protein [Xenopus laevis]
Length = 458
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR YIE V+ L+ L + ++ T +V E+E+
Sbjct: 92 TRTNEKVELQELNDRFVNYIEKVRYLEQQNQILVTEVNKLKGKEPT---RVNELYEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ ++ + +E+ L+D+L LK +
Sbjct: 149 ELRRQVDLVTNQRARVEVERDNLVDDLHRLKQR 181
>gi|297273282|ref|XP_001102095.2| PREDICTED: glial fibrillary acidic protein [Macaca mulatta]
Length = 459
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 224
>gi|387016582|gb|AFJ50410.1| Keratin, type II cytoskeletal cochleal-like [Crotalus adamanteus]
Length = 488
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R++EK ++K LN++ A +I+ V+ L+ LE +++ T+
Sbjct: 92 IDPTIQKVRKEEKEQIKVLNNKFASFIDKVRFLEQQNKMLETKWNILQQQKTSTRNNTAP 151
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD + K L E + + D + D KNK
Sbjct: 152 VFEAYINNLRRQLDSLQNDKGRLEGELKNMQDLVEDFKNK 191
>gi|431912043|gb|ELK14184.1| Glial fibrillary acidic protein [Pteropus alecto]
Length = 432
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 12 AKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLA 71
A TPS G+ +R S R PP P + G+ + +R E+ E+ LNDR A
Sbjct: 24 ALTPSRRLGAGTR-LSLARMPPPLP-ARVDFSLAGALNAGFKETRASERAEMMELNDRFA 81
Query: 72 QYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALA 131
YIE V+ L+ +L L + T+ V A E+ ++R LD+ +++ + L
Sbjct: 82 SYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELRELRLRLDQLTANSARLE 138
Query: 132 IEKRRLLDELLDLKNK 147
+E+ L +L L+ K
Sbjct: 139 VERDNLAQDLGTLRQK 154
>gi|90076582|dbj|BAE87971.1| unnamed protein product [Macaca fascicularis]
Length = 528
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQASH-AQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|148595486|emb|CAL69619.1| intermediate filament A protein [Oikopleura dioica]
Length = 468
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 46 GSPLSPTIISRR-QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+P+ P +S+R EK ELK LN+R A+Y++ VQ L+ + LE L
Sbjct: 86 AAPIGPQFVSQRTNEKEELKTLNNRFARYLKRVQDLERENKILEAQL 132
>gi|426348004|ref|XP_004041631.1| PREDICTED: glial fibrillary acidic protein isoform 2 [Gorilla
gorilla gorilla]
Length = 501
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 224
>gi|313245256|emb|CBY40042.1| unnamed protein product [Oikopleura dioica]
Length = 445
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 46 GSPLSPTIISRR-QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+P+ P +S+R EK ELK LN+R A+Y++ VQ L+ + LE L
Sbjct: 86 AAPIGPQFVSQRTNEKEELKTLNNRFARYLKRVQDLERENKILEAQL 132
>gi|363745006|ref|XP_001231586.2| PREDICTED: keratin, type II cytoskeletal 75 [Gallus gallus]
Length = 550
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ELK LN++ A +I+ V+ L+ LE + L E+S TT + + E I
Sbjct: 148 RTQEREELKTLNNKFASFIDKVRFLEQQNKVLETKWKLLQ-EQSPTTSTRSLDPYFEAYI 206
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD SS K L E + D + D K K
Sbjct: 207 SRLRKQLDGLSSEKIQLESELKSFQDMVEDFKTK 240
>gi|324503259|gb|ADY41419.1| Lamin-1 [Ascaris suum]
Length = 590
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 47 SPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVK 106
S +S + +R E+ L NLNDRLA I V+KL+ + + L + E E + V+
Sbjct: 36 SVMSTSCQTRLLERETLSNLNDRLAVLINRVRKLEMENSRLNIRISESEMPQKDEEEHVR 95
Query: 107 AASEKEIEDIRKALDRESSSKSALA-------IEKRRLLDE 140
E +I ++R +D + LA +E+ RLL+E
Sbjct: 96 ERYEAKISELRAVMDESIKQQRCLAAELQTILVERNRLLNE 136
>gi|51895965|gb|AAH81253.1| LOC446967 protein, partial [Xenopus laevis]
Length = 467
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLE 88
EK+ ++NLNDRLA Y++ VQ L+ND LE
Sbjct: 102 EKHTMQNLNDRLASYLDKVQALENDNTDLE 131
>gi|332847424|ref|XP_003315449.1| PREDICTED: glial fibrillary acidic protein isoform 1 [Pan
troglodytes]
Length = 501
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 224
>gi|134152436|gb|AAI34387.1| Vim protein [Mus musculus]
Length = 218
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|351711353|gb|EHB14272.1| Neurofilament medium polypeptide [Heterocephalus glaber]
Length = 841
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 105 LSRSNEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 163
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 164 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 197
>gi|327264548|ref|XP_003217075.1| PREDICTED: keratin, type II cytoskeletal 79-like [Anolis
carolinensis]
Length = 717
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R QE+ E+KNLN++ A +IE V+ L+ + +LE +++ + ++ E I
Sbjct: 145 ARNQEREEMKNLNNQFACFIEKVRILEQENKALETKWNLLQQYAMVPRRNLEPYYENFIS 204
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+++ +D ++ LA +K + + + D K+K
Sbjct: 205 NMKYQIDCLLHTREHLANDKNAIQELVEDFKSK 237
>gi|432888030|ref|XP_004075032.1| PREDICTED: neurofilament light polypeptide-like [Oryzias latipes]
Length = 662
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QE+++L++LNDR A +IE V++L+ +L+ L + + H E +++A E+E
Sbjct: 87 RTQERSQLQDLNDRFAGFIERVRELEQQNRALQAELLLLRQRH-AEPSRLRALYEQEARS 145
Query: 116 IRKALD 121
+R A++
Sbjct: 146 LRAAVE 151
>gi|410920403|ref|XP_003973673.1| PREDICTED: intermediate filament protein ON3-like [Takifugu
rubripes]
Length = 491
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN+R A +I+ V+ L+ LE + +S+ + TT + + E I +
Sbjct: 115 RTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQEQTTTRSNIDSMFEAYISN 173
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E R + + D K K
Sbjct: 174 LRRQLDGLGNEKVKLEGELRNMQGLVEDFKKK 205
>gi|185133571|ref|NP_001117824.1| type II keratin E2 [Oncorhynchus mykiss]
gi|15028978|emb|CAC45057.1| type II keratin E2 [Oncorhynchus mykiss]
Length = 592
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I R EK+++K LN+R A +I+ V+ L+ LE + +S+ + TT + A
Sbjct: 161 IDPNIQTVRTNEKDQIKGLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQTTTRSNIDA 219
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD K + E + + D KNK
Sbjct: 220 MFEAYIANLRRQLDGLGGEKVKMEGELTNMQGLVEDFKNK 259
>gi|348507695|ref|XP_003441391.1| PREDICTED: protein timeless homolog [Oreochromis niloticus]
Length = 1716
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 2 SGRSKRGATPAKTPSASRGSSSRQTSEVREEP-PQPQPQSQPPRPGSPLSPTI-----IS 55
SGR R +P T SR ++ Q R P PQP P+ + L+ I +
Sbjct: 36 SGRYMRSMSPVVT---SRSTAFHQQ---RSRPSPQP-PRLSYDKVDFTLAEAINQEFLTT 88
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL--YSIEESHTTEFKKVKAASEKEI 113
R EK EL+ LNDR A +IE V+ L+ +L+ L + ++ H + ++E+
Sbjct: 89 RSNEKAELQELNDRFASFIEKVRYLEQQNGALQQELNQFKGQQQHGQP-NRASELFQEEL 147
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D + +E+ L ++L LK +
Sbjct: 148 RELRRQMDAIGKERDQYQLERDNLAEDLTLLKQR 181
>gi|355737803|gb|AES12435.1| vimentin [Mustela putorius furo]
Length = 273
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|354504783|ref|XP_003514453.1| PREDICTED: keratin, type II cytoskeletal 75-like [Cricetulus
griseus]
Length = 538
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K+LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 140 RKEEKEQIKSLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 198
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ + L E + + D + D KNK
Sbjct: 199 LRRQLECLGGERGRLETELKSMQDVVEDFKNK 230
>gi|350592302|ref|XP_003483440.1| PREDICTED: neurofilament medium polypeptide-like isoform 2 [Sus
scrofa]
Length = 696
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 96 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 154
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 155 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 188
>gi|450496|emb|CAA52188.1| lamin [Caenorhabditis elegans]
Length = 566
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
GS L T SR QEK+ L +LN RLA YI+ V++L+ + L+ + IE E +
Sbjct: 34 GSTLLET--SRLQEKDHLTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSNL 91
Query: 106 KAASEKEIEDIRKALD 121
E E +R+ALD
Sbjct: 92 ADRFEAEKARLRRALD 107
>gi|17506429|ref|NP_492371.1| Protein LMN-1 [Caenorhabditis elegans]
gi|46576888|sp|Q21443.2|LMN1_CAEEL RecName: Full=Lamin-1; AltName: Full=Ce-lamin; AltName:
Full=CeLam-1; Flags: Precursor
gi|3875347|emb|CAB09411.1| Protein LMN-1 [Caenorhabditis elegans]
Length = 566
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
GS L T SR QEK+ L +LN RLA YI+ V++L+ + L+ + IE E +
Sbjct: 34 GSTLLET--SRLQEKDHLTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSNL 91
Query: 106 KAASEKEIEDIRKALD 121
E E +R+ALD
Sbjct: 92 ADRFEAEKARLRRALD 107
>gi|431890641|gb|ELK01520.1| Keratin, type I cuticular Ha7 [Pteropus alecto]
Length = 437
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 36 PQPQSQPPRPGSPLSPTIIS----------RRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
P + P PG+ P I EK ++ LNDRLA Y+E V++L+ D A
Sbjct: 50 PSCNTACPLPGTCHVPGNIGICGTYGEGSLNGHEKVTMQFLNDRLANYLEKVRQLERDNA 109
Query: 86 SLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIE 133
LE + + H + + + IE++++ + S KS L ++
Sbjct: 110 ELETKIREWSKCHESTVCPDYQSYFRSIEELQQKILCIKSEKSRLVVQ 157
>gi|47223161|emb|CAG11296.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1267
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PT+ R QEK ++K+LN+R A +I+ V+ L+ LE + + + + T +VK
Sbjct: 36 IDPTVRAVRYQEKEQIKSLNNRFASFIDKVRNLEQQNKMLE-TKWKLLQQETATPSQVKP 94
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++++ LD + KS L +E + L D + K
Sbjct: 95 MLEAYIANLQRQLDLITKDKSRLDMENSTVYKNLNDYRTK 134
>gi|311267326|ref|XP_003131510.1| PREDICTED: keratin, type I cytoskeletal 20-like [Sus scrofa]
Length = 430
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK +KNLNDRLA Y+E V+ L+ + E + ES+T + +A ++I+D+R
Sbjct: 76 EKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRN 135
Query: 119 ALDRES---SSKSALAIEKRRLLDELLDLK 145
+ R++ +++ L I+ +L E LK
Sbjct: 136 QI-RDAQLQNARCVLQIDNAKLAAEDFRLK 164
>gi|74228116|dbj|BAE38014.1| unnamed protein product [Mus musculus]
Length = 557
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 94 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 153 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 186
>gi|56789060|gb|AAH87987.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 485
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E++ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 119 NRTNEKAEMQELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 175
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ +++K + +++ L D+L L+ K
Sbjct: 176 ELRRQLDQVTNAKDRVEVDRDNLADDLQRLREK 208
>gi|28627982|gb|AAN46118.1| intermediate filament protein HG-IF1 [Heterodera glycines]
Length = 580
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR +EK EL +LNDRLA YIE V+ L+ L+ L ++ + +K E EI+
Sbjct: 67 SRDREKKELSDLNDRLANYIEKVRFLEAQNRKLKADLDMLQGRRGKDTITIKTMYESEIQ 126
Query: 115 DIRKALDRESSSKSAL 130
+K ++ SK L
Sbjct: 127 TAKKLIEDTGRSKHEL 142
>gi|149600619|ref|XP_001520559.1| PREDICTED: keratin, type I cytoskeletal 20-like [Ornithorhynchus
anatinus]
Length = 496
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 11 PAK----TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNL 66
PAK TPS G+ T R Q Q G L + EK ++NL
Sbjct: 78 PAKQVFYTPSVYGGAGGWGT---RISTSTTQIQY-----GEGLGAGKLLTGNEKGTMQNL 129
Query: 67 NDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSS 126
NDRLA Y+E V+ LQ + LE + E ++T + + K IE++++ + +
Sbjct: 130 NDRLANYLEKVRSLQQANSKLEVQIRQWHEKNSTPLGRDYRSYYKAIEELQEQIKNAQIN 189
Query: 127 KSALAIE 133
+ L ++
Sbjct: 190 NAQLVLQ 196
>gi|47212110|emb|CAF96692.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI S R QEK ++K LN+R A +I+ V+ L+ LE + + + + TT +
Sbjct: 123 IDPTIHSIRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWKLLQEQTTSRSNIDM 181
Query: 108 ASEKEIEDIRKALD 121
E I ++RK LD
Sbjct: 182 MFEAYIANLRKHLD 195
>gi|134025381|gb|AAI35298.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 484
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E++ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 118 NRTNEKAEMQELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 174
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ +++K + +++ L D+L L+ K
Sbjct: 175 ELRRQLDQVTNAKDRVEVDRDNLADDLQRLREK 207
>gi|354505547|ref|XP_003514829.1| PREDICTED: peripherin-like [Cricetulus griseus]
gi|344247773|gb|EGW03877.1| Peripherin [Cricetulus griseus]
Length = 474
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A+L L ++ E + ++E
Sbjct: 94 LATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGEL---SQARGQEPARADQLCQQE 150
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ D+R+ L+ + + +E+ L ++L LK +
Sbjct: 151 LRDLRRELELLGRERDRVQVERDALAEDLAALKQR 185
>gi|260813225|ref|XP_002601319.1| hypothetical protein BRAFLDRAFT_81361 [Branchiostoma floridae]
gi|229286613|gb|EEN57331.1| hypothetical protein BRAFLDRAFT_81361 [Branchiostoma floridae]
Length = 350
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L+ ++R EK EL LNDR A YIE V+ LQ L + I+E+ +E + +
Sbjct: 24 TLADARVTRSGEKRELVVLNDRFASYIEKVRSLQERNTKLTTQI-RIQEASRSEERNITE 82
Query: 108 ASEKEIEDIRKALD 121
E E+ ++R +D
Sbjct: 83 VYETELTELRALVD 96
>gi|297691972|ref|XP_002823355.1| PREDICTED: keratin, type II cytoskeletal 79 [Pongo abelii]
Length = 777
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH---TTEFKKVKAASEKE 112
R QE+ ++K LN++ A +I+ V+ L+ LE ++E ++ E
Sbjct: 403 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQGQNLGVTRNNLEPLFEAY 462
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +R LDR S + L E R + D + D KNK
Sbjct: 463 LGSMRSTLDRLQSERGRLDSELRNVQDLVEDFKNK 497
>gi|301612555|ref|XP_002935787.1| PREDICTED: keratin, type II cytoskeletal cochleal-like [Xenopus
(Silurana) tropicalis]
Length = 517
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
RR+EK ++K LN++ A +I+ V+ L+ LE + ++I + T ++ E I +
Sbjct: 128 RREEKEQIKTLNNKFASFIDKVRFLEQQNKMLE-TKWAILQEQRTARSHIEPLFEAYIGN 186
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD KS L E++ + D + D K K
Sbjct: 187 LRRQLDCLLGEKSRLEGERKNMEDIVEDFKRK 218
>gi|20338640|emb|CAA11443.2| intermediate filament protein B2 [Branchiostoma floridae]
Length = 350
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L+ ++R EK EL LNDR A YIE V+ LQ L + I+E+ +E + +
Sbjct: 24 TLADARVTRSGEKRELVVLNDRFASYIEKVRSLQERNTKLTTQI-RIQEASRSEERNITE 82
Query: 108 ASEKEIEDIRKALD 121
E E+ ++R +D
Sbjct: 83 VYETELTELRALVD 96
>gi|206597416|ref|NP_001128275.1| vimentin [Xenopus (Silurana) tropicalis]
gi|197245780|gb|AAI68783.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 461
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E++ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 95 NRTNEKAEMQELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 151
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ +++K + +++ L D+L L+ K
Sbjct: 152 ELRRQLDQVTNAKDRVEVDRDNLADDLQRLREK 184
>gi|47212111|emb|CAF96693.1| unnamed protein product [Tetraodon nigroviridis]
Length = 412
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI R QEK ++K LN+R A +I+ V+ L+ LE ++E TT +
Sbjct: 93 IDPTIQAVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLETKWKLLQEQTTTR-SNIDG 151
Query: 108 ASEKEIEDIRKALD 121
E I ++R+ LD
Sbjct: 152 MFEAYIANLRRQLD 165
>gi|260813217|ref|XP_002601315.1| hypothetical protein BRAFLDRAFT_81357 [Branchiostoma floridae]
gi|229286609|gb|EEN57327.1| hypothetical protein BRAFLDRAFT_81357 [Branchiostoma floridae]
Length = 238
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L+ ++R EK EL LNDR A YIE V+ LQ L + I+E+ +E + +
Sbjct: 24 TLADARVTRSGEKRELVVLNDRFASYIEKVRSLQERNTKLTTQI-RIQEASRSEERNITE 82
Query: 108 ASEKEIEDIRKALD 121
E E+ ++R +D
Sbjct: 83 VYETELTELRALVD 96
>gi|74225487|dbj|BAE31653.1| unnamed protein product [Mus musculus]
Length = 466
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L++K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLRDK 188
>gi|226442596|ref|NP_001139904.1| Neurofilament light polypeptide [Salmo salar]
gi|221219854|gb|ACM08588.1| Neurofilament light polypeptide [Salmo salar]
Length = 260
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK +L+ LNDR A +IE V +L+ L+ L + + H E +++ E EI
Sbjct: 94 RTQEKAQLQELNDRFASFIERVHELEQQNRLLDAELLILRQKH-GEPSHLRSLYEHEIRQ 152
Query: 116 IRKALDRESSSKSALAIEKRRLLDELL 142
+R A++ K A A R ++E+L
Sbjct: 153 LRAAVEEARDEKQA-AQNHRDQMEEVL 178
>gi|26328885|dbj|BAC28181.1| unnamed protein product [Mus musculus]
Length = 157
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 68 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 124
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 125 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 157
>gi|441660402|ref|XP_003270780.2| PREDICTED: glial fibrillary acidic protein isoform 2 [Nomascus
leucogenys]
Length = 501
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 224
>gi|18858755|ref|NP_571107.1| internexin neuronal intermediate filament protein, alpha b [Danio
rerio]
gi|1881766|gb|AAC34933.1| gefiltin [Danio rerio]
Length = 471
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V+ L+ LE L ++ + TE ++ ++EI
Sbjct: 83 IIRTNEKEQMQGLNDRFAMFIEKVRNLEQHNKVLETELVTLRQRQ-TEPSRLAELYQQEI 141
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ ++ K+ + E+ + ++L L K
Sbjct: 142 RELRSQLEELNAEKNQMMFERDSIEEDLQKLHEK 175
>gi|291409855|ref|XP_002721207.1| PREDICTED: neurofilament, heavy polypeptide 200kDa-like
[Oryctolagus cuniculus]
Length = 967
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS----EKE 112
R EK +L+ LNDR A YI+ V++L+ SLE ++ + +AA E+E
Sbjct: 91 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAG-----RAAMGELYERE 145
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R + R +++ L +E+ LL+++ ++ +
Sbjct: 146 VLEMRGVVLRLGAARGQLRLEQEHLLEDIAHVRQR 180
>gi|194500504|gb|ACF75526.1| filament protein [Philodina roseola]
Length = 552
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 44 RPGSPLSPTII--SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHT 99
RP P++ +R +EK EL LND+ A Y+E V+ L QN K +E + ++ E
Sbjct: 56 RPSINKPPSLFNQTREKEKLELSTLNDKFADYVEKVRYLEAQNKKVQMETN--TLNEKQQ 113
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALA 131
++VK+ E EI +++ ++ K+A+
Sbjct: 114 NHCQRVKSMFENEIAQMKELAEKLFKDKNAIV 145
>gi|308482127|ref|XP_003103267.1| CRE-MUA-6 protein [Caenorhabditis remanei]
gi|308260057|gb|EFP04010.1| CRE-MUA-6 protein [Caenorhabditis remanei]
Length = 585
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%)
Query: 7 RGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNL 66
R T + + GS +R V E P + S +R +EK E+ L
Sbjct: 18 RTVTSSTQNYGTPGSGNRVLKIVTEMSSSSVASGLSPYGQNAASTIRDNREREKKEIMEL 77
Query: 67 NDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSS 126
NDRLA YIE V+ L+ L L ++ VK E EI + + + S
Sbjct: 78 NDRLAGYIEKVRFLEAQNRKLGADLQMLQGRFGKSTGSVKVMYELEITTAQTVVKQTSKD 137
Query: 127 KSALAIEKRRLLDELLDLKNK 147
K E R+L D+L + + K
Sbjct: 138 KEEAEKEIRKLQDQLNEFRKK 158
>gi|4468777|emb|CAB38186.1| cytoplasmic intermediate filament protein [Urechis caupo]
Length = 608
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
R QEK ++++LN+RLA Y+E V+ L+ L L ++ E VK + E++
Sbjct: 92 GRDQEKKDMQDLNERLASYLEKVRFLEARNRKLADELDKLKSKWGKETTAVKTMYQTELD 151
Query: 115 DIRKALDRESSSKSALAIE 133
+ R+ LD K+ L ++
Sbjct: 152 EARRLLDESEKGKAGLELQ 170
>gi|397469871|ref|XP_003806562.1| PREDICTED: glial fibrillary acidic protein [Pan paniscus]
Length = 502
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 224
>gi|348501111|ref|XP_003438114.1| PREDICTED: vimentin-like [Oreochromis niloticus]
Length = 455
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 5 SKRGATPAKTPSASRGSSSR------QTSEVREEPPQPQPQSQP---PRPGSPLSPTIIS 55
S++ + P ++ S G SS +T +R P+ S+ + S I +
Sbjct: 28 SRQFSIPVRSSRVSFGLSSTPTIYASKTQRLRSSAAMPRLASENLDFSLSDAINSEFITN 87
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK ++++LNDR A YIE V+ L+ L L +E+ +V E E+ +
Sbjct: 88 RTNEKAQMQSLNDRFANYIEKVRFLEQQNKIL---LAELEQLRGKGTSRVGDLYEDEMRE 144
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ +D+ ++ K+ + + + L D++ L+ K
Sbjct: 145 LRRQVDQLTNEKARVEVHRDNLGDDIDRLREK 176
>gi|61403519|gb|AAH91905.1| Gefiltin [Danio rerio]
Length = 469
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +++ LNDR A +IE V+ L+ LE L ++ + TE ++ ++EI
Sbjct: 81 IIRTNEKEQMQGLNDRFAMFIEKVRNLEQHNKVLETELVTLRQRQ-TEPSRLAELYQQEI 139
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ ++ K+ + E+ + ++L L K
Sbjct: 140 RELRSQLEELNAEKNQMMFERDSIEEDLQKLHEK 173
>gi|426348002|ref|XP_004041630.1| PREDICTED: glial fibrillary acidic protein isoform 1 [Gorilla
gorilla gorilla]
Length = 502
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 224
>gi|332847422|ref|XP_511561.3| PREDICTED: glial fibrillary acidic protein isoform 2 [Pan
troglodytes]
Length = 502
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 224
>gi|187936100|gb|ACD37593.1| filament protein [Philodina roseola]
Length = 555
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 44 RPGSPLSPTII--SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHT 99
RP P++ +R +EK EL LND+ A Y+E V+ L QN K +E + ++ E
Sbjct: 56 RPSINKPPSLFNQTREKEKLELSTLNDKFADYVEKVRYLEAQNKKVQMETN--TLNEKQQ 113
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALA 131
++VK+ E EI +++ ++ K+A+
Sbjct: 114 NHCQRVKSMFENEIAQMKELAEKLFKDKNAIV 145
>gi|38303787|gb|AAH45052.2| Vim1 protein [Xenopus laevis]
Length = 458
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 92 NRTNEKAEMMELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ ++ K+ + +++ L D+L L+ K
Sbjct: 149 ELRRQLDQATNDKARVEVDRDNLADDLQRLREK 181
>gi|90075276|dbj|BAE87318.1| unnamed protein product [Macaca fascicularis]
Length = 466
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTDEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNGKARVEVERDNLTEDIMRLREK 188
>gi|431921663|gb|ELK19015.1| Keratin, type II cytoskeletal 7 [Pteropus alecto]
Length = 462
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 49 LSPTIISRRQEKNE-LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P+I RQE+ E +K LN++ A +I+ V+ L+ LE ++E + + +
Sbjct: 77 IDPSIQQVRQEEREQIKTLNNKFASFIDKVRFLEQQNKLLETKWALLQEQKSAKSSSLPG 136
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I +RK L+ S L +E R D L D KNK
Sbjct: 137 IFEAHIAGLRKQLEALQLDGSRLEVELRSTQDVLEDFKNK 176
>gi|213514128|ref|NP_001134046.1| Keratin, type I cytoskeletal 20 [Salmo salar]
gi|209730278|gb|ACI66008.1| Keratin, type I cytoskeletal 20 [Salmo salar]
Length = 274
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK+ ++NLNDRLA Y+E V+ L+ + LE + E + KK + I DIR
Sbjct: 86 EKHTMQNLNDRLATYLEKVRSLETANSKLELQIKEFYEMRSPTHKKDLSGFYATITDIRN 145
Query: 119 ALDRESSSKSALAIE 133
+ S S + ++
Sbjct: 146 KIHARSVENSQMILQ 160
>gi|432848872|ref|XP_004066493.1| PREDICTED: desmin-like [Oryzias latipes]
Length = 470
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASE 110
+ +R EK EL++LNDR A YIE V+ L QN S+E +E E ++ E
Sbjct: 101 LATRTNEKAELQHLNDRFASYIEKVRFLEQQNQALSVE-----VERLRGREPTRIADLYE 155
Query: 111 KEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+E+ ++R+ ++ ++ +S + +E+ L ++L LK
Sbjct: 156 EEMRELRRQVEILTNQRSRVEVERDNLAEDLDKLK 190
>gi|440909179|gb|ELR59116.1| Vimentin, partial [Bos grunniens mutus]
Length = 470
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 103 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 159
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 160 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 192
>gi|345311899|ref|XP_001509681.2| PREDICTED: keratin, type II cytoskeletal 4-like, partial
[Ornithorhynchus anatinus]
Length = 391
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ V+ L+ LE ++L ++ TT K ++ E I
Sbjct: 182 RTEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQGTTTTSKHLEPFFEAYI 240
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S K L E + + D + D K+K
Sbjct: 241 STLRKQLDNLLSDKGRLQSELKTMQDTVEDFKSK 274
>gi|148676106|gb|EDL08053.1| vimentin, isoform CRA_a [Mus musculus]
Length = 405
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|410963254|ref|XP_003988180.1| PREDICTED: vimentin [Felis catus]
Length = 466
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|148595489|emb|CAL69621.1| intermediate filament C protein [Oikopleura dioica]
Length = 402
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R +EK ELK+LN+R A YIE V+ L+ L+ L I + + ++ E+
Sbjct: 55 RNEEKEELKDLNNRFATYIERVRYLEQQNKLLDAQLRQITVKYDSNLPEIYV---NELRR 111
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R+ + ++ KS L E RL ++LDL+
Sbjct: 112 LRQITETLNNDKSLLEAELERLRSDVLDLR 141
>gi|57114172|ref|NP_001009148.1| vimentin [Pan troglodytes]
gi|56342340|dbj|BAD74030.1| vimentin [Pan troglodytes verus]
Length = 466
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|335296459|ref|XP_003130769.2| PREDICTED: vimentin-like [Sus scrofa]
gi|408360214|sp|P02543.2|VIME_PIG RecName: Full=Vimentin
Length = 466
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|149021113|gb|EDL78720.1| vimentin, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|432112610|gb|ELK35326.1| Keratin, type II cytoskeletal 75 [Myotis davidii]
Length = 547
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT-TEFKKVK 106
+ PTI R++E+ ++K LN++ A +I+ V+ L+ LE ++E T T + ++
Sbjct: 134 IDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGTKTVRQNLE 193
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + D+R+ LD +S + L E R + D + D K
Sbjct: 194 PFFDAYLNDLRRQLDSVTSERGRLDAELRNMQDVVEDFK 232
>gi|391346535|ref|XP_003747528.1| PREDICTED: myosin heavy chain, muscle-like [Metaseiulus occidentalis]
Length = 1929
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLEYS-------LYSIEESHTTEFKKVKAASEKEI 113
++++NLND +A ELV KL +K +L+ S L ++E+ KVKA E+ +
Sbjct: 969 HQIRNLNDEIAHQEELVAKLNKEKKALQESGGKSAEDLQAVEDK-VNHLNKVKAKLEQTL 1027
Query: 114 EDIRKALDRESSSKSALAIEKRRL 137
+++ +L+RE +++ L KR++
Sbjct: 1028 DELEDSLEREKKTRADLDKAKRKV 1051
>gi|311255411|ref|XP_001927253.2| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4
[Sus scrofa]
Length = 611
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R QE+ ++K LND+ A +I+ V+ L+ LE ++L ++ TT K + E I
Sbjct: 219 RTQEREQIKILNDKFASFIDKVRFLEQQNKVLETKWNLLQ-QQKTTTSSKNLDPFFEAYI 277
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD ++ K L E + + D + D K K
Sbjct: 278 SALRKQLDTLTNDKGYLQSELKIMQDSVEDFKAK 311
>gi|387915460|gb|AFK11339.1| desmin [Callorhinchus milii]
Length = 458
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 2 SGRSKRGATPAKTPSASR---GSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTII-SRR 57
SGR G+ A S+ GS TS R + P + L+ + +R
Sbjct: 34 SGRFGGGSNAASRVVMSKTTTGSLPSYTS-FRAKAPVRSYEVVDFNLADALNQEFLHTRT 92
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
EK E+++LNDR A YIE V+ L+ L + ++ T +V E+E+ ++R
Sbjct: 93 NEKAEMQHLNDRFASYIEKVRFLEQQNKMLVVEVNKLKGQDT---GRVGDLYEQEMRELR 149
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++ ++ K + +++ L D+L LK +
Sbjct: 150 RQIEALTNEKVRVEVDRDNLADDLQKLKQR 179
>gi|402913880|ref|XP_003919379.1| PREDICTED: vimentin isoform 1 [Papio anubis]
gi|402913882|ref|XP_003919380.1| PREDICTED: vimentin isoform 2 [Papio anubis]
gi|75075845|sp|Q4R4X4.3|VIME_MACFA RecName: Full=Vimentin
gi|97537614|sp|P84198.3|VIME_CERAE RecName: Full=Vimentin
gi|67971018|dbj|BAE01851.1| unnamed protein product [Macaca fascicularis]
gi|76097693|gb|ABA39528.1| vimentin [Chlorocebus aethiops]
gi|355562319|gb|EHH18913.1| Vimentin [Macaca mulatta]
gi|355782668|gb|EHH64589.1| Vimentin [Macaca fascicularis]
gi|380787893|gb|AFE65822.1| vimentin [Macaca mulatta]
gi|383421345|gb|AFH33886.1| vimentin [Macaca mulatta]
Length = 466
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLTEDIMRLREK 188
>gi|296476437|tpg|DAA18552.1| TPA: Keratin, type I cytoskeletal 20-like [Bos taurus]
Length = 391
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK ++NLNDRLA Y+E V+ L+ + LE + E++T + +A +I+++R
Sbjct: 178 EKMTMQNLNDRLASYLERVRSLEQSNSHLEQQIKHWYETNTPSTGRDHSAYMGQIKELRD 237
Query: 119 AL--DRESSSKSALAIEKRRLLDELLDLKNK 147
+ + ++++ L I+ R+ + LK K
Sbjct: 238 QIADGKVNNAQIILLIDNARMAVDDFSLKKK 268
>gi|290563247|ref|NP_001166511.1| vimentin [Cavia porcellus]
gi|194245416|gb|ACF35341.1| vimentin [Cavia porcellus]
Length = 464
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 97 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 153
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 154 ELRRQVDQLTNDKARVEVERDNLTEDIMRLREK 186
>gi|145226795|gb|ABP48145.1| vimentin [Ovis aries]
Length = 466
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|124232|sp|P23730.1|IFEA_ASCSU RecName: Full=Intermediate filament protein A; Short=IF-A
Length = 497
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 63 LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDR 122
+ +LNDRLA YIE V+ L+ L L + + V+A E E+++ RK ++
Sbjct: 1 MSDLNDRLASYIEKVRFLEAQNRKLAADLDLLRGRWGKDTLSVRAMYEGELQEARKLVND 60
Query: 123 ESSSKSALAIEKRRLLDEL 141
+ + L E R+LLDEL
Sbjct: 61 TNRQREELEKEIRKLLDEL 79
>gi|170593321|ref|XP_001901413.1| Intermediate filament tail domain containing protein [Brugia
malayi]
gi|158591480|gb|EDP30093.1| Intermediate filament tail domain containing protein [Brugia
malayi]
Length = 607
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAA 108
+SP+ +R+ EK+ L NLNDRLA YI+ V++L+ + L + E E + A
Sbjct: 46 VSPSRRTRQYEKDTLSNLNDRLAVYIDRVRQLELENERLNVRINESEVVEKKERHDLVAR 105
Query: 109 SEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E +++++R +D K+ + +E + L E
Sbjct: 106 YEAKVKELRDLIDDALKEKTRVNMEAKSALAE 137
>gi|30692526|gb|AAP33501.1| glial fibrillary acidic protein [Mus musculus]
Length = 150
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 62 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R LD+ +++ + L +E+ L +L L+
Sbjct: 119 ELRLRLDQLTANSARLEVERDNLAQDLGTLR 149
>gi|2764986|emb|CAA69027.1| IF protein [Lineus viridis]
Length = 602
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R++EK ++++LN+RLA YIE V+ L+ L L + E VKA E E+
Sbjct: 95 NRKREKKDMQDLNERLASYIEKVRFLEAQNKKLGAELDELRAKWGKETAAVKAMYEAELA 154
Query: 115 DIRKALD 121
RK LD
Sbjct: 155 QERKLLD 161
>gi|167887751|gb|ACA06103.1| vimentin variant 3 [Homo sapiens]
Length = 431
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|110347570|ref|NP_776394.2| vimentin [Bos taurus]
gi|146291097|sp|P48616.3|VIME_BOVIN RecName: Full=Vimentin
gi|109659186|gb|AAI18270.1| Vimentin [Bos taurus]
gi|296481436|tpg|DAA23551.1| TPA: vimentin [Bos taurus]
Length = 466
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|47115317|emb|CAG28618.1| VIM [Homo sapiens]
Length = 466
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|17568557|ref|NP_510648.1| Protein MUA-6 [Caenorhabditis elegans]
gi|42558939|sp|O02365.1|IFA2_CAEEL RecName: Full=Intermediate filament protein ifa-2; AltName:
Full=Cel IF A2; AltName: Full=Intermediate filament
protein A2; Short=IF-A2
gi|2198433|emb|CAA50183.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
gi|3880589|emb|CAB03486.1| Protein MUA-6 [Caenorhabditis elegans]
Length = 581
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 55/141 (39%)
Query: 7 RGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNL 66
R T + + GS +R V E P + S +R +EK E+ L
Sbjct: 19 RTVTSSSQNYGAPGSGNRVLKIVTETHSSSVSSGLSPYGQNAASTIRDNREREKKEIMEL 78
Query: 67 NDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSS 126
NDRLA YIE V+ L L+ L ++ VK E EI + +
Sbjct: 79 NDRLASYIEKVRFLDAQNRKLDADLKMLQGRFGKSTGSVKVMYEMEITTATNVVKQTGKD 138
Query: 127 KSALAIEKRRLLDELLDLKNK 147
E R+L D+L +L+ K
Sbjct: 139 HGETEKEIRKLQDQLDELRKK 159
>gi|308512563|ref|XP_003118464.1| CRE-IFA-4 protein [Caenorhabditis remanei]
gi|308239110|gb|EFO83062.1| CRE-IFA-4 protein [Caenorhabditis remanei]
Length = 577
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 9 ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLND 68
+T + S G+S +T ++ E P S SR +EK E+ LND
Sbjct: 24 STATYGSTISSGTS--RTLKITEIGGSTLTSGMSPFGNHAASAIRESRTREKKEMSELND 81
Query: 69 RLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKS 128
RLA YIE V+ L+ +E L + + VK E E+ ++ + +
Sbjct: 82 RLASYIEKVRFLEAQNRKMEKDLDLLRGKWGHDSTSVKVMFETELRTAKELIADSDKERG 141
Query: 129 ALAIEKRRLLDELLDLKNK 147
L + R+L +EL + +NK
Sbjct: 142 QLEDQIRKLTEELNNYRNK 160
>gi|402900546|ref|XP_003913233.1| PREDICTED: glial fibrillary acidic protein [Papio anubis]
Length = 502
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 224
>gi|301605117|ref|XP_002932207.1| PREDICTED: desmin-like [Xenopus (Silurana) tropicalis]
Length = 547
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 20/102 (19%)
Query: 4 RSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQ-PPRPGSPLSPTI--------- 53
R++R A+ ++ S R S R +P+S P G+ L PT+
Sbjct: 134 RNRRSASYSRVTREENASCRRTASATR------RPRSMFVPSFGAQLGPTVDLEAASAAN 187
Query: 54 ----ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+R EK E+ LNDRL +YIE V+ L+ + AS + L
Sbjct: 188 QEYLSTRSSEKQEMIVLNDRLTKYIERVRDLEQENASAQCEL 229
>gi|18858423|ref|NP_571183.1| type I cytokeratin [Danio rerio]
gi|6180205|gb|AAF05846.1|AF197880_1 type I cytokeratin [Danio rerio]
Length = 425
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
G LS I EK ++NLNDRLA Y+E V+ L+ A LE + + +S T
Sbjct: 64 AGFHLSDAIDVSANEKATMQNLNDRLASYLEKVRTLERANADLELKIRQLLDSKT 118
>gi|291406275|ref|XP_002719238.1| PREDICTED: glial fibrillary acidic protein-like [Oryctolagus
cuniculus]
Length = 474
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
++R LD+ ++S + L +E+ L +L L+
Sbjct: 122 ELRLRLDQLTASSTRLEVERDNLAQDLGTLR 152
>gi|62896523|dbj|BAD96202.1| vimentin variant [Homo sapiens]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|55408|emb|CAA39807.1| vimentin [Mus musculus]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQFTNDKARVEVERDNLAEDIMRLREK 188
>gi|432875807|ref|XP_004072917.1| PREDICTED: low molecular weight neuronal intermediate filament-like
[Oryzias latipes]
Length = 608
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR +IE V L+ LE + + + H +E ++ E+EI
Sbjct: 94 IIRTNEKEQLQGLNDRFVSFIEKVHNLEQHNKVLEAEVTLLRQRH-SEPSRLHELYEQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDEL 141
++R ++ + KS + ++ ++ D L
Sbjct: 153 RELRARVEELTHEKSQMHLDCVQMNDTL 180
>gi|73948978|ref|XP_856478.1| PREDICTED: vimentin isoform 12 [Canis lupus familiaris]
gi|301766514|ref|XP_002918676.1| PREDICTED: vimentin-like [Ailuropoda melanoleuca]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|395532804|ref|XP_003768457.1| PREDICTED: LOW QUALITY PROTEIN: glial fibrillary acidic protein
[Sarcophilus harrisii]
Length = 437
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ L L + T+ V A E+
Sbjct: 62 TRSSERAEMMELNDRFASYIEKVRFLEQQNKVLAGELNQLRGKEPTKLADVYQA---ELH 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R LD+ ++S + L IE+ L ++L L+ K
Sbjct: 119 RLRLQLDQLTASSARLEIERDNLAEDLATLRQK 151
>gi|126341294|ref|XP_001368237.1| PREDICTED: vimentin-like [Monodelphis domestica]
Length = 467
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 100 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 156
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 157 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 189
>gi|62414289|ref|NP_003371.2| vimentin [Homo sapiens]
gi|397522328|ref|XP_003831224.1| PREDICTED: vimentin [Pan paniscus]
gi|426364082|ref|XP_004049151.1| PREDICTED: vimentin [Gorilla gorilla gorilla]
gi|55977767|sp|P08670.4|VIME_HUMAN RecName: Full=Vimentin
gi|37850|emb|CAA39600.1| unnamed protein product [Homo sapiens]
gi|13111801|gb|AAH00163.2| Vimentin [Homo sapiens]
gi|21040384|gb|AAH30573.1| Vimentin [Homo sapiens]
gi|22854562|gb|AAN09720.1| CTCL tumor antigen HD-CL-06 [Homo sapiens]
gi|44890587|gb|AAH66956.1| Vimentin [Homo sapiens]
gi|62896573|dbj|BAD96227.1| vimentin variant [Homo sapiens]
gi|62896763|dbj|BAD96322.1| vimentin variant [Homo sapiens]
gi|119606621|gb|EAW86215.1| vimentin, isoform CRA_a [Homo sapiens]
gi|119606622|gb|EAW86216.1| vimentin, isoform CRA_a [Homo sapiens]
gi|149846002|emb|CAA79613.2| intermediate filament protein [Homo sapiens]
gi|158254718|dbj|BAF83332.1| unnamed protein product [Homo sapiens]
gi|167887749|gb|ACA06101.1| vimentin variant 1 [Homo sapiens]
gi|167887750|gb|ACA06102.1| vimentin variant 2 [Homo sapiens]
gi|307685975|dbj|BAJ20918.1| vimentin [synthetic construct]
gi|343959778|dbj|BAK63746.1| vimentin [Pan troglodytes]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|158962631|sp|Q5R1W8.4|VIME_PANTR RecName: Full=Vimentin
gi|146741510|dbj|BAF62411.1| vimentin [Pan troglodytes verus]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|441660399|ref|XP_003270779.2| PREDICTED: glial fibrillary acidic protein isoform 1 [Nomascus
leucogenys]
Length = 502
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 135 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 191
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 192 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 224
>gi|403278155|ref|XP_003930689.1| PREDICTED: vimentin [Saimiri boliviensis boliviensis]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|74185445|dbj|BAE30193.1| unnamed protein product [Mus musculus]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|296206226|ref|XP_002750115.1| PREDICTED: vimentin-like isoform 1 [Callithrix jacchus]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|395827279|ref|XP_003786832.1| PREDICTED: vimentin [Otolemur garnettii]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLTEDIMRLREK 188
>gi|348585243|ref|XP_003478381.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament heavy
polypeptide-like [Cavia porcellus]
Length = 1115
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED- 115
R EK +L+ LNDR A YI+ V++L+ SLE ++ + + E+E+ +
Sbjct: 92 RSEKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQQAGRRAPMGELYEREVRET 151
Query: 116 -IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R A+ R +++ L +E+ LL ++ ++ +
Sbjct: 152 RMRGAVLRLGAARGQLRLEQEHLLXDIAHVRQR 184
>gi|291402252|ref|XP_002717466.1| PREDICTED: vimentin [Oryctolagus cuniculus]
Length = 466
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|109088355|ref|XP_001093658.1| PREDICTED: vimentin [Macaca mulatta]
Length = 464
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLTEDIMRLREK 188
>gi|344255339|gb|EGW11443.1| Keratin, type I cuticular Ha3-I [Cricetulus griseus]
Length = 329
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYS--------IEESHTTEFKKVKAASE 110
EK ++ LNDRLA Y+E V++L+ + A LE + + ++ + F ++ +
Sbjct: 56 EKETMQFLNDRLASYLEKVRQLERENAELEARIQERNQQQDPLVCPAYQSYFATIEQLQQ 115
Query: 111 K----EIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
K +I +R+ LD + KS L + L +ELL LK
Sbjct: 116 KLVESDINGLRRILDELTLCKSDLEAQVESLKEELLCLK 154
>gi|194212042|ref|XP_001494757.2| PREDICTED: keratin, type II cytoskeletal 8-like [Equus caballus]
Length = 434
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K LN++ A +I+ V+ L+ LE + +S + T +
Sbjct: 86 VDPNIQVVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKILE-TKWSFLQQQKTARSNMDN 144
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD K L +E + + D KNK
Sbjct: 145 MFESYINNLRRQLDALGQEKLKLEVELGNMQGLVEDFKNK 184
>gi|54606869|ref|NP_001006106.1| low molecular weight neuronal intermediate filament [Xenopus
(Silurana) tropicalis]
gi|49250383|gb|AAH74515.1| low molecular weight neuronal intermediate filament [Xenopus
(Silurana) tropicalis]
Length = 468
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR YIE V +L+ LE + + + H +E ++ E+EI
Sbjct: 79 IVRTNEKEQLQGLNDRFVTYIEKVHQLEQQNKLLEAEVTLLRQKH-SEPSRLSQIYEQEI 137
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K ++ L L LK K
Sbjct: 138 RELRSRLEEQEQEKDQAELDYEHLGTCLQQLKMK 171
>gi|354482483|ref|XP_003503427.1| PREDICTED: vimentin [Cricetulus griseus]
gi|344245951|gb|EGW02055.1| Vimentin [Cricetulus griseus]
Length = 466
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|54696084|gb|AAV38414.1| vimentin [synthetic construct]
gi|61366117|gb|AAX42816.1| vimentin [synthetic construct]
gi|61371578|gb|AAX43693.1| vimentin [synthetic construct]
Length = 467
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|138531|sp|P24789.1|VIM1_XENLA RecName: Full=Vimentin-1/2
gi|65207|emb|CAA34741.1| vimentin (Vim1) [Xenopus laevis]
gi|55391520|gb|AAH85223.1| Vim1 protein [Xenopus laevis]
Length = 458
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 92 NRTNEKAEMIELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 148
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ ++ K+ + +++ L D+L L+ K
Sbjct: 149 ELRRQLDQATNDKARVEVDRDNLADDLQRLREK 181
>gi|340219|gb|AAA61279.1| vimentin [Homo sapiens]
Length = 466
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|126343630|ref|XP_001362825.1| PREDICTED: keratin, type II cytoskeletal 75-like [Monodelphis
domestica]
Length = 558
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKV 105
+ PTI R++E+ ++K LN++ A +I+ V+ L QN +++L E+ T + +
Sbjct: 141 IDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQ-EQGMKTVKQNL 199
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ E I D+R+ LD +S + L E R + D + D K K
Sbjct: 200 EPLFESYISDLRRQLDTITSERGRLDSELRNMQDVVEDFKIK 241
>gi|289450|gb|AAA53661.1| vimentin [Bos taurus]
Length = 466
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGQLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARAEVERHNLAEDIMRLREK 188
>gi|147907228|ref|NP_001080529.1| peripherin [Xenopus laevis]
gi|28280030|gb|AAH45209.1| Plasticin protein [Xenopus laevis]
Length = 456
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A L + I ++ + E + ++E
Sbjct: 83 LTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVL---VTEINQARSKEPTRASDLCQQE 139
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++RK L+ + + +E+ ++L LK +
Sbjct: 140 LRELRKQLELLGKDRDHIQVERDNFAEDLAFLKQR 174
>gi|148232220|ref|NP_001080908.1| vimentin-1/2 [Xenopus laevis]
gi|51258384|gb|AAH80051.1| Vim1 protein [Xenopus laevis]
Length = 459
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 93 NRTNEKAEMIELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ LD+ ++ K+ + +++ L D+L L+ K
Sbjct: 150 ELRRQLDQATNDKARVEVDRDNLADDLQRLREK 182
>gi|313231266|emb|CBY08381.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R +EK ELK+LN+R A YIE V+ L+ L+ L I + + ++ E+
Sbjct: 55 RNEEKEELKDLNNRFATYIERVRYLEQQNKLLDAQLRQITVKYDSNLPEIYV---NELRR 111
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R+ + ++ KS L E RL ++LDL+
Sbjct: 112 LRQITETLNNDKSLLEAELERLRSDVLDLR 141
>gi|148595488|emb|CAL69620.1| intermediate filament C protein [Oikopleura dioica]
Length = 370
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R +EK ELK+LN+R A YIE V+ L+ L+ L I + + ++ E+
Sbjct: 55 RNEEKEELKDLNNRFATYIERVRYLEQQNKLLDAQLRQITVKYDSNLPEIYV---NELRR 111
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLK 145
+R+ + ++ KS L E RL ++LDL+
Sbjct: 112 LRQITETLNNDKSLLEAELERLRSDVLDLR 141
>gi|41054736|ref|NP_955828.1| internexin neuronal intermediate filament protein, alpha [Danio
rerio]
gi|33604170|gb|AAH56314.1| Zgc:65851 [Danio rerio]
gi|41944583|gb|AAH65939.1| Zgc:65851 [Danio rerio]
Length = 562
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR +IE V L+ LE + + + H E ++ E+EI
Sbjct: 91 IIRTNEKEQLQGLNDRFVTFIEKVHNLEQHNKVLEAEVALLRQRH-NEPSRLHDLYEQEI 149
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R ++ + KS + ++ ++ D L +K+K
Sbjct: 150 RELRARVEELAHEKSQMHLDCVQMNDALERVKDK 183
>gi|157423173|gb|AAI53779.1| LOC100126634 protein [Xenopus laevis]
Length = 454
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 20/102 (19%)
Query: 4 RSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQ-PPRPGSPLSPTI--------- 53
R++R A+ ++ SS R S R +P+S P G+ + PT+
Sbjct: 41 RNRRSASYSRVTREEHASSRRTASATR------RPRSMFIPCFGAQMGPTVDLEAASAAN 94
Query: 54 ----ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+R EK E+ LNDRL +YIE V+ L+ AS + L
Sbjct: 95 QEYLSTRSSEKQEMIVLNDRLTKYIERVRDLEQQNASAQCEL 136
>gi|221048017|gb|ACL98116.1| keratin 15 [Epinephelus coioides]
Length = 276
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
EK ++NLNDRLA Y+E V+ L+ A LE + + ES T+ + +A E I D++
Sbjct: 82 EKATMQNLNDRLASYLEKVRMLEKANAELELKIRNFLESKTSPTARDYSAFEATIADLQ 140
>gi|347944086|gb|AEP27811.1| Hau-cytoplasmic intermediate filament 3 [Helobdella sp. Austin]
Length = 332
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
SR +EK ++++LN+R A YIE V+ L+ L L +++ E ++K + E++
Sbjct: 8 SREKEKKDMQDLNERFASYIEKVRFLEAQNKRLSEELEKLKQKWGKETTQIKVMFQAELD 67
Query: 115 DIRKALDRESSSKSALAI 132
RK LD K+ L I
Sbjct: 68 QARKVLDDAEKEKARLEI 85
>gi|74199770|dbj|BAE20723.1| unnamed protein product [Mus musculus]
Length = 466
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|74139645|dbj|BAE40959.1| unnamed protein product [Mus musculus]
Length = 466
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|348507795|ref|XP_003441441.1| PREDICTED: intermediate filament protein ON3-like [Oreochromis
niloticus]
Length = 623
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 49 LSPTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ PTI + R +EK ++K LN+R A +I+ V+ L+ LE + + + T + A
Sbjct: 123 IDPTIQAIRTEEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWKLLHEQTASHSNIDA 181
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++RK LD K L + + + D K K
Sbjct: 182 MFEAYIANLRKQLDNLGHEKVKLESDLHNVTGLVEDFKTK 221
>gi|225706178|gb|ACO08935.1| Vimentin [Osmerus mordax]
Length = 210
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ +LNDR A YI+ V+ L+ L L ++ T+ ++ E E+
Sbjct: 93 NRTNEKAEMIHLNDRFANYIDKVRFLEQQNKILIAELEQLKGKGTS---RIGDLYEDEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +++ L D++ L+ K
Sbjct: 150 ELRRQVDQLTNEKARVEVDRDNLGDDIERLREK 182
>gi|14389299|ref|NP_112402.1| vimentin [Rattus norvegicus]
gi|401365|sp|P31000.2|VIME_RAT RecName: Full=Vimentin
gi|57480|emb|CAA44722.1| vimentin [Rattus norvegicus]
gi|38197662|gb|AAH61847.1| Vimentin [Rattus norvegicus]
Length = 466
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|31982755|ref|NP_035831.2| vimentin [Mus musculus]
gi|138536|sp|P20152.3|VIME_MOUSE RecName: Full=Vimentin
gi|202370|gb|AAA40556.1| vimentin [Mus musculus]
gi|58476928|gb|AAH89335.1| Vimentin [Mus musculus]
gi|74215113|dbj|BAE41790.1| unnamed protein product [Mus musculus]
gi|74227480|dbj|BAE21803.1| unnamed protein product [Mus musculus]
gi|117616736|gb|ABK42386.1| Vimentin [synthetic construct]
gi|148676107|gb|EDL08054.1| vimentin, isoform CRA_b [Mus musculus]
Length = 466
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|120537710|gb|AAI29317.1| Zgc:109868 protein [Danio rerio]
Length = 429
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
G LS I EK ++NLNDRLA Y+E V+ L+ A LE + +S T
Sbjct: 64 AGFHLSDAIDVSANEKATMQNLNDRLASYLEKVRTLEKANADLELKIRQFLDSKT 118
>gi|327264445|ref|XP_003217024.1| PREDICTED: keratin, type II cytoskeletal cochleal-like isoform 2
[Anolis carolinensis]
Length = 480
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 47 SPLS----PTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHT 99
SPL+ PTI R++EK ++K LN++ A +I+ V+ L+ LE YSL ++E T
Sbjct: 110 SPLNLEIDPTIQKVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKYSL--LQEQKT 167
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
T+ + E I ++R+ LD + K L E R + D + D K+K
Sbjct: 168 TK-SNLAPIFETYISNLRRQLDSLMNDKGRLEGELRNMQDLVEDFKSK 214
>gi|202368|gb|AAA40555.1| vimentin protein [Mus musculus]
Length = 466
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|1346686|sp|P48676.1|PERI_XENLA RecName: Full=Peripherin; AltName: Full=Neuronal intermediate
filament IF3
Length = 456
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A L + I ++ + E + ++E
Sbjct: 82 LTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVL---VTEINQARSKEPTRASDLCQQE 138
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++RK L+ + + +E+ ++L LK +
Sbjct: 139 LRELRKQLELLGKDRDHIQVERDNFAEDLAFLKQR 173
>gi|138535|sp|P02544.2|VIME_MESAU RecName: Full=Vimentin
gi|387077|gb|AAA37104.1| vimentin, partial [Mesocricetus auratus]
Length = 465
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 98 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 154
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 155 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 187
>gi|395541385|ref|XP_003772625.1| PREDICTED: keratin, type II cytoskeletal 8 [Sarcophilus harrisii]
Length = 486
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L P I R QEK ++K LN++ A +I+ V+ L+ LE + +S+ + T + +
Sbjct: 87 LDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLE-TKWSLLQQQKTSRSNMDS 145
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E I ++R+ LD K L +E + + D KNK
Sbjct: 146 MFESYIANLRRQLDSLGQEKLKLEVELSNMQGLVEDFKNK 185
>gi|149021114|gb|EDL78721.1| vimentin, isoform CRA_b [Rattus norvegicus]
Length = 466
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|21757045|dbj|BAC05002.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 87 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 143
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 144 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 176
>gi|350583970|ref|XP_003126216.3| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa]
Length = 551
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT-TEFKKVK 106
+ PTI R++E+ ++K LN++ A +I+ V+ L+ LE ++E T T + ++
Sbjct: 138 IDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGTRTVRQNLE 197
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + D+R+ LD ++ + L E R + D + D K
Sbjct: 198 PLFDAYVNDLRRQLDNVTTERGRLDAELRNMQDVVEDFK 236
>gi|213510980|ref|NP_001133947.1| Vimentin [Salmo salar]
gi|209155924|gb|ACI34194.1| Vimentin [Salmo salar]
Length = 462
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 29 VREEPPQPQPQSQPPRPGSPLSPTIIS-----RRQEKNELKNLNDRLAQYIELVQKLQND 83
+R P P+ LS I S R EK E+++LNDR A YI+ V+ L+
Sbjct: 65 IRLRSSAPMPRLSSETVDFALSDAINSEFKANRTNEKAEMQHLNDRFASYIDKVRFLEQQ 124
Query: 84 KASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLD 143
L L +E+ ++ E E+ D+R+ +D+ ++ K+ + +++ L +++
Sbjct: 125 NKIL---LAELEQLKGKGASRIGDLYEDEMRDLRRQVDQLTNEKAHVEVDRDNLGEDIER 181
Query: 144 LKNK 147
L+ K
Sbjct: 182 LREK 185
>gi|432867542|ref|XP_004071234.1| PREDICTED: glial fibrillary acidic protein-like [Oryzias latipes]
Length = 448
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + + + + E+
Sbjct: 82 TRTNEKMEMMGLNDRFASYIEKVRMLEQQNKVLVAELNQLRGKEPSRLGDI---YQDELR 138
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 139 ELRRQVDNLTTGKARLEIERDNLAADLATLKQR 171
>gi|62955621|ref|NP_001017824.1| cytokeratin-like [Danio rerio]
gi|62205109|gb|AAH92718.1| Zgc:109868 [Danio rerio]
Length = 430
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 45 PGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
G LS I EK ++NLNDRLA Y+E V+ L+ A LE + +S T
Sbjct: 65 AGFHLSDAIDVSANEKATMQNLNDRLASYLEKVRTLERANADLELKIRQFLDSKT 119
>gi|260813221|ref|XP_002601317.1| hypothetical protein BRAFLDRAFT_224321 [Branchiostoma floridae]
gi|229286611|gb|EEN57329.1| hypothetical protein BRAFLDRAFT_224321 [Branchiostoma floridae]
Length = 326
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++R EK EL LNDR A YIE V+ LQ L + I+E+ E + + E E+
Sbjct: 4 VTRSGEKRELVALNDRFASYIEKVRSLQERSTRLTTQI-RIQEASRIEERNITEVYETEL 62
Query: 114 EDIRKALD 121
++R +D
Sbjct: 63 TELRALVD 70
>gi|440896114|gb|ELR48139.1| Keratin, type II cytoskeletal 75, partial [Bos grunniens mutus]
Length = 525
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK-VKAASEKEIE 114
R++E+ ++K LN++ A +I+ V+ L+ LE ++E T ++ ++ E I
Sbjct: 142 RKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGTRTVRQSLEPFFEAYIT 201
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R+ LD ++ + L E R + D + D K
Sbjct: 202 DLRRQLDSITTERGRLDAELRTMQDVVEDFK 232
>gi|76154781|gb|AAX26200.2| SJCHGC04232 protein [Schistosoma japonicum]
Length = 236
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 45 PGSP-LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFK 103
P SP +ISR +EK EL++LNDR A IE + K D S E+S SH
Sbjct: 39 PKSPSFDSLLISRLEEKEELQHLNDRFANIIEYLHK---DIFSKEFS------SH---ID 86
Query: 104 KVKAASEKEIEDIRKALDRE 123
+K + + E+ED K E
Sbjct: 87 LLKNSLKNELEDYVKVFSNE 106
>gi|143811428|sp|P08552.2|NFM_PIG RecName: Full=Neurofilament medium polypeptide; Short=NF-M;
AltName: Full=160 kDa neurofilament protein; AltName:
Full=Neurofilament 3; AltName: Full=Neurofilament
triplet M protein
Length = 455
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +++ LNDR A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 97 LSRSNEKEQIQGLNDRFAGYIEKVHYLEQQNKEIEAEIQALRQKQASH-AQLGDAYDQEI 155
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 156 RELRATLELVNHEKAQVQLDSDHLEEDIHRLKER 189
>gi|149714746|ref|XP_001504448.1| PREDICTED: keratin, type II cytoskeletal 75-like isoform 1 [Equus
caballus]
Length = 549
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKV 105
+ PTI R++E+ ++K LN++ A +I+ V+ L+ LE +SL + S T + +
Sbjct: 136 IDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGSKTVR-QNL 194
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ + I D+R+ LD +S + L E R + D + D K
Sbjct: 195 EPLFDTYINDLRRQLDSITSERGRLDAELRNMQDVVEDFK 234
>gi|126308345|ref|XP_001368268.1| PREDICTED: glial fibrillary acidic protein [Monodelphis domestica]
Length = 428
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ L L + T+ V A E+
Sbjct: 62 TRSSERAEMMELNDRFASYIEKVRFLEQQNKVLAGELNQLRGKEPTKLADVYQA---ELH 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R LD+ ++S + L IE+ L ++L L+ K
Sbjct: 119 RLRLELDQLNASSARLEIERDNLAEDLTTLRQK 151
>gi|341865569|ref|NP_001230074.1| vimentin [Equus caballus]
Length = 466
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFASYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 188
>gi|134025638|gb|AAI36057.1| nefh protein [Xenopus (Silurana) tropicalis]
Length = 838
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK L+ LN+R A YIE V++L+ SL+ ++ + + E+EI D+
Sbjct: 63 RDEKEALQGLNERFAGYIEKVRRLEEQNRSLQQEATALRKQQAG-ISAIGQLYEREIRDM 121
Query: 117 RKALDRESSSKSALAIEKRRLLD--ELLDLKNK 147
R L + +S +E+ RL + ELL LK +
Sbjct: 122 RNQLLKINSENGQEQLERDRLSEDIELLRLKTQ 154
>gi|312086497|ref|XP_003145099.1| intermediate filament tail domain-containing protein [Loa loa]
gi|307759738|gb|EFO18972.1| intermediate filament tail domain-containing protein [Loa loa]
Length = 598
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAA 108
+SP+ +R+ EK+ L NLNDRLA YI+ V++L+ + L + E E + A
Sbjct: 46 VSPSRRTRQYEKDTLSNLNDRLAVYIDRVRQLELENERLNVRINESEVVEKKERHDLVAR 105
Query: 109 SEKEIEDIRKALDRESSSKSALAIEKRRLLDE 140
E +++++R +D K+ + +E + L E
Sbjct: 106 YEAKVKELRDLIDDALKEKTRVNMEAKSALAE 137
>gi|185133215|ref|NP_001118201.1| vimentin [Oncorhynchus mykiss]
gi|1353213|sp|P48674.1|VIME_ONCMY RecName: Full=Vimentin
gi|940868|emb|CAA90601.1| vimentin [Oncorhynchus mykiss]
gi|1589589|prf||2211359A vimentin
Length = 461
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 29 VREEPPQPQPQSQPPRPGSPLSPTIIS-----RRQEKNELKNLNDRLAQYIELVQKLQND 83
VR P P+ LS I S R EK E+++LNDR A YI+ V+ L+
Sbjct: 64 VRLRSSAPMPRLSSDTVDFALSDAINSEFKANRTNEKAEMQHLNDRFASYIDKVRFLEQQ 123
Query: 84 KASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLD 143
L L +E+ ++ E E+ D+R+ +D+ ++ K+ + +++ + +++
Sbjct: 124 NKIL---LAELEQLKGKGASRIGDLYEDEMRDLRRQVDQLTNEKAHVEVDRDNMGEDIER 180
Query: 144 LKNK 147
L+ K
Sbjct: 181 LREK 184
>gi|348581109|ref|XP_003476320.1| PREDICTED: keratin, type II cytoskeletal 8-like [Cavia porcellus]
Length = 474
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++KNLN++ A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 90 RIQEKEQIKNLNNKFASFIDKVRFLEQQNKMLE-TKWSLLQQQKTSRSNMDNMFESYINN 148
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L E + + D KNK
Sbjct: 149 LRRQLDTLGQEKLKLEAELGNMQGMVEDFKNK 180
>gi|391346462|ref|XP_003747492.1| PREDICTED: myosin heavy chain, muscle-like isoform 1 [Metaseiulus
occidentalis]
Length = 1934
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLE------YSLYSIEESHTTEFKKVKAASEKEIE 114
++++NLND +AQ EL+ KL +K SL+ +E KVKA E+ ++
Sbjct: 974 HQIRNLNDEIAQKEELIAKLNKEKKSLQEQGSKTTDDLQAQEDKVNHLNKVKAKLEQTLD 1033
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
++ +L+RE +++ L KR++ +L
Sbjct: 1034 ELEDSLEREKKARADLDKTKRKVEGDL 1060
>gi|341882071|gb|EGT38006.1| hypothetical protein CAEBREN_12303 [Caenorhabditis brenneri]
Length = 567
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
GS L T SR QEK+ L +LN RLA YI+ V++L+ + L+ + IE E
Sbjct: 35 GSTLLET--SRLQEKDHLTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSNQ 92
Query: 106 KAASEKEIEDIRKALD 121
E E +R+ALD
Sbjct: 93 ADRFEAEKARLRRALD 108
>gi|327264443|ref|XP_003217023.1| PREDICTED: keratin, type II cytoskeletal cochleal-like isoform 1
[Anolis carolinensis]
Length = 522
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 47 SPLS----PTIIS-RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHT 99
SPL+ PTI R++EK ++K LN++ A +I+ V+ L+ LE YSL ++E T
Sbjct: 110 SPLNLEIDPTIQKVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKYSL--LQEQKT 167
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
T+ + E I ++R+ LD + K L E R + D + D K+K
Sbjct: 168 TK-SNLAPIFETYISNLRRQLDSLMNDKGRLEGELRNMQDLVEDFKSK 214
>gi|12331357|emb|CAC24702.1| keratin type II Lfl-K 1 [Lampetra fluviatilis]
Length = 478
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 42 PPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTE 101
PP + P R QEK+++K LNDR A +I+ V+ L+ LE +++E +
Sbjct: 88 PPEIDRSILPV---RNQEKDQIKGLNDRFANFIDKVRFLEQQNKVLEAQWRALQERGSGG 144
Query: 102 FKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ + E I +++ LD + K L +E + + + D K K
Sbjct: 145 -SNLDSLFEAYINGLKQHLDGLGNEKQRLQVELQHMQGAVEDFKAK 189
>gi|359323093|ref|XP_543639.4| PREDICTED: keratin, type II cytoskeletal 8 [Canis lupus familiaris]
Length = 491
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K+LN++ A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 96 RTQEKEQIKSLNNKFASFIDKVRHLEQQNKILE-TKWSLLQQQKTSRSNIDNMFESYINN 154
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L +E + + D KNK
Sbjct: 155 LRRQLDTLGQEKLKLEVELGNMQGLVEDFKNK 186
>gi|158253872|gb|AAI54261.1| Zgc:136930 protein [Danio rerio]
Length = 464
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
I+SR EK+ L LNDR + Y+ V+ LQ + A+LE L
Sbjct: 102 ILSRAAEKHTLSGLNDRFSTYMAKVRALQQENAALEAKL 140
>gi|268577319|ref|XP_002643641.1| C. briggsae CBR-IFA-3 protein [Caenorhabditis briggsae]
Length = 576
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%)
Query: 7 RGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNL 66
R T + + GS +R V E P + S +R +EK E+ L
Sbjct: 18 RTVTSSTQNYGTPGSGNRVLKIVTEMSSSSVASGLSPYGQNAASTIRDNREREKKEIMEL 77
Query: 67 NDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSS 126
NDRLA YIE V+ L+ L L ++ VK E EI + + +
Sbjct: 78 NDRLAGYIEKVRFLEAQNRKLGADLQMLQGRFGKSTGSVKVMYELEITTAQTVVKQTGKD 137
Query: 127 KSALAIEKRRLLDELLDLKNK 147
K E R+L D+L + + K
Sbjct: 138 KEEAEREIRKLQDQLDEFRKK 158
>gi|119571953|gb|EAW51568.1| glial fibrillary acidic protein, isoform CRA_b [Homo sapiens]
Length = 299
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|334688844|ref|NP_001229305.1| glial fibrillary acidic protein isoform 3 [Homo sapiens]
Length = 438
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|116004057|ref|NP_001070385.1| keratin, type II cytoskeletal 75 [Bos taurus]
gi|122132186|sp|Q08D91.1|K2C75_BOVIN RecName: Full=Keratin, type II cytoskeletal 75; AltName:
Full=Cytokeratin-75; Short=CK-75; AltName:
Full=Keratin-6 hair follicle; AltName: Full=Keratin-75;
Short=K75; AltName: Full=Type II keratin-K6hf; AltName:
Full=Type-II keratin Kb18
gi|115305101|gb|AAI23882.1| Keratin 75 [Bos taurus]
gi|296487870|tpg|DAA29983.1| TPA: keratin, type II cytoskeletal 75 [Bos taurus]
Length = 543
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK-VKAASEKEIE 114
R++E+ ++K LN++ A +I+ V+ L+ LE ++E T ++ ++ E I
Sbjct: 142 RKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGTRTVRQSLEPFFEAYIT 201
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R+ LD ++ + L E R + D + D K
Sbjct: 202 DLRRQLDSITTERGRLDAELRTMQDVVEDFK 232
>gi|395826200|ref|XP_003786307.1| PREDICTED: glial fibrillary acidic protein isoform 2 [Otolemur
garnettii]
Length = 431
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 66 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRSKEPTKLADVYQA---ELR 122
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 123 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 155
>gi|5030428|gb|AAD01874.2| glial fibrillary acidic protein delta [Rattus norvegicus]
Length = 421
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDQLTTNSARLEVERDNLTQDLGTLRQK 152
>gi|181342186|ref|NP_001116752.1| neurofilament, medium polypeptide b [Danio rerio]
gi|169153922|emb|CAQ15326.1| neurofilament, medium polypeptide [Danio rerio]
Length = 717
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YI+ V+ L+ LE + ++++ ++ + A ++E++D
Sbjct: 71 RNNEKEQLQGLNDRFASYIDKVRFLEEQNKQLEAEIQALKQQKLSQSLQTD-AYDRELQD 129
Query: 116 IRKALDRESSSKSALAIEKRRLLDEL 141
+R AL++ K+ + ++ + ++L
Sbjct: 130 LRCALEQLHKEKAQILLDTDHMDEDL 155
>gi|2078001|emb|CAA69019.1| vimentin [Mus musculus]
Length = 446
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 79 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 135
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 136 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 168
>gi|449488711|ref|XP_002192027.2| PREDICTED: keratin, type II cytoskeletal cochleal-like [Taeniopygia
guttata]
Length = 348
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN++ A +I+ V+ L+ LE ++E TT + E I +
Sbjct: 102 RKEEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQEQKTTR-SNIAPMFETYISN 160
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E + + D + D K K
Sbjct: 161 LRRQLDGLLADKGRLEGELKNMQDLVEDFKTK 192
>gi|124481590|gb|AAI33106.1| Nefm protein [Danio rerio]
Length = 707
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YI+ V+ L+ LE + ++++ ++ + A ++E++D
Sbjct: 71 RNNEKEQLQGLNDRFASYIDKVRFLEEQNKQLEAEIQALKQQKLSQSLQTD-AYDRELQD 129
Query: 116 IRKALDRESSSKSALAIEKRRLLDEL 141
+R AL++ K+ + ++ + ++L
Sbjct: 130 LRCALEQLHKEKAQILLDTDHMDEDL 155
>gi|47575782|ref|NP_001001235.1| peripherin [Xenopus (Silurana) tropicalis]
gi|45708889|gb|AAH67967.1| peripherin [Xenopus (Silurana) tropicalis]
Length = 456
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A L + I ++ + E + ++E
Sbjct: 83 LTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVL---VTEINQARSKEPTRASDLCQQE 139
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ L+ + + +E+ L ++L LK +
Sbjct: 140 LRELRRQLELLGKDRDRIQVERDNLAEDLAFLKQR 174
>gi|444731081|gb|ELW71446.1| Keratin, type II cytoskeletal 4 [Tupaia chinensis]
Length = 527
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT K ++ E +
Sbjct: 143 RTEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTTTTSVKNLEPLFEVYL 201
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S+ K L E + + D + D K K
Sbjct: 202 SALRKQLDSLSNDKGRLQSELKTMQDSVEDFKTK 235
>gi|391346464|ref|XP_003747493.1| PREDICTED: myosin heavy chain, muscle-like isoform 2 [Metaseiulus
occidentalis]
Length = 1932
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 61 NELKNLNDRLAQYIELVQKLQNDKASLE------YSLYSIEESHTTEFKKVKAASEKEIE 114
++++NLND +AQ EL+ KL +K SL+ +E KVKA E+ ++
Sbjct: 972 HQIRNLNDEIAQKEELIAKLNKEKKSLQEQGSKTTDDLQAQEDKVNHLNKVKAKLEQTLD 1031
Query: 115 DIRKALDRESSSKSALAIEKRRLLDEL 141
++ +L+RE +++ L KR++ +L
Sbjct: 1032 ELEDSLEREKKARADLDKTKRKVEGDL 1058
>gi|73965502|ref|XP_848378.1| PREDICTED: glial fibrillary acidic protein isoform 2 [Canis lupus
familiaris]
Length = 433
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 20/122 (16%)
Query: 43 PRPG---SPLSPTII--------------SRRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
PRP PL PT + +R E+ E+ LNDR A YIE V+ L+
Sbjct: 37 PRPSVARMPLPPTRVDFSLAAALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNK 96
Query: 86 SLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+L L + T+ V A E+ ++R LD+ +++ + L +E+ L +L L+
Sbjct: 97 ALAAELNQLRAKEPTKLADVYQA---ELRELRLRLDQLTANSARLEVERDNLAQDLGTLR 153
Query: 146 NK 147
K
Sbjct: 154 QK 155
>gi|16552261|dbj|BAB71275.1| unnamed protein product [Homo sapiens]
Length = 410
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 78 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 134
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 135 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 167
>gi|89886307|ref|NP_001034908.1| uncharacterized protein LOC563946 [Danio rerio]
gi|89130640|gb|AAI14313.1| Zgc:136930 [Danio rerio]
Length = 390
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
I+SR EK+ L LNDR + Y+ V+ LQ + A+LE L
Sbjct: 28 ILSRAAEKHTLSGLNDRFSTYMAKVRALQQENAALEAKL 66
>gi|11139432|gb|AAG31697.1|AF237379_1 neurofilament protein [Xenopus laevis]
gi|2062611|gb|AAB53390.1| middle molecular weight neurofilament protein NF-M(2) [Xenopus
laevis]
Length = 913
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 83 RFSEKEQLQGLNDRFVGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 141
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L D+L LK +
Sbjct: 142 LRVNLELLGHDKAQIVLDTEHLEDDLQRLKER 173
>gi|148235899|ref|NP_001081681.1| neurofilament, medium polypeptide [Xenopus laevis]
gi|50415606|gb|AAH78128.1| LOC397995 protein [Xenopus laevis]
Length = 913
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 83 RFSEKEQLQGLNDRFVGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 141
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L D+L LK +
Sbjct: 142 LRVNLELLGHDKAQIVLDTEHLEDDLQRLKER 173
>gi|301609535|ref|XP_002934335.1| PREDICTED: hypothetical protein LOC100101753 [Xenopus (Silurana)
tropicalis]
Length = 1125
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 57 RQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDI 116
R EK L+ LN+R A YIE V++L+ SL+ ++ + + E+EI D+
Sbjct: 63 RDEKEALQGLNERFAGYIEKVRRLEEQNRSLQQEATALRKQQAG-ISAIGQLYEREIRDM 121
Query: 117 RKALDRESSSKSALAIEKRRLLD--ELLDLK 145
R L + +S +E+ RL + ELL LK
Sbjct: 122 RNQLLKINSENGQEQLERDRLSEDIELLRLK 152
>gi|355698813|gb|AES00921.1| keratin 8 [Mustela putorius furo]
Length = 352
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN++ A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 94 RTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLE-TKWSLLQQQKTARSNIDNMFESYISN 152
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L +E + + D KNK
Sbjct: 153 LRRQLDTLGQEKLKLEVELGNMQGLVEDFKNK 184
>gi|291385888|ref|XP_002709357.1| PREDICTED: neurofilament, medium polypeptide 150kDa, partial
[Oryctolagus cuniculus]
Length = 775
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
+SR EK +L+ LND A YIE V L+ +E + ++ + + ++ A ++EI
Sbjct: 8 LSRSNEKEQLQGLNDXFAGYIEKVHYLEQQNKEIEAEIQALRQKQAS-HAQLGDAYDQEI 66
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R L+ + K+ + ++ L +++ LK +
Sbjct: 67 RELRATLEMVNHEKAQVQLDSDHLEEDIHRLKER 100
>gi|196115290|ref|NP_001124491.1| glial fibrillary acidic protein isoform 2 [Homo sapiens]
Length = 431
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|344249346|gb|EGW05450.1| Keratin, type II cytoskeletal 5 [Cricetulus griseus]
Length = 431
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K+LN++ A +I+ V+ L+ LE + +S+ + H T ++ E I +
Sbjct: 33 RKEEKEQIKSLNNKFASFIDKVRFLEQQNKVLE-TKWSLLQEHKTTRTNLEPMFEAYITN 91
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ + L E + + D + D KNK
Sbjct: 92 LRRQLECLGGERGRLETELKSMQDVVEDFKNK 123
>gi|308482245|ref|XP_003103326.1| hypothetical protein CRE_27588 [Caenorhabditis remanei]
gi|308260116|gb|EFP04069.1| hypothetical protein CRE_27588 [Caenorhabditis remanei]
Length = 581
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Query: 7 RGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTI-ISRRQEKNELKN 65
R T + S GS +R + E P G + TI R +EK E+
Sbjct: 18 RTVTSSTQNFGSPGSGNRLIKIITETSSSTMTGG-PSSFGQSAASTIRDGREREKKEIME 76
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDRLA YIE V+ L+ LE + + VK E EI + K + S
Sbjct: 77 LNDRLASYIEKVRFLEAQNRKLEADVKMLHGRSGKSTVSVKIMYESEITEAHKVVKESSV 136
Query: 126 SK 127
SK
Sbjct: 137 SK 138
>gi|34536332|dbj|BAC87610.1| unnamed protein product [Homo sapiens]
Length = 431
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|1353212|sp|P48670.1|VIME_CRIGR RecName: Full=Vimentin
gi|387058|gb|AAA37029.1| vimentin, partial [Cricetulus sp.]
Length = 448
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 81 TRTNEKVELQELNDRFADYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 137
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 138 ELRRQVDQLTNDKARVEVERDNLAEDIIRLREK 170
>gi|131888757|ref|NP_001076574.1| keratin 17 [Danio rerio]
gi|157423292|gb|AAI53513.1| Si:dkeyp-113d7.7 [Danio rerio]
Length = 423
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 49 LSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
LS I S EK ++NLNDRLA Y+E V+ L+ + A LE + +S T
Sbjct: 63 LSDGIDSSANEKATMQNLNDRLASYLEKVRILEKENADLELKIRQFLDSKAT 114
>gi|383856659|ref|XP_003703825.1| PREDICTED: uncharacterized protein LOC100875746 [Megachile
rotundata]
Length = 956
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 36 PQPQSQPPRP---GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLY 92
QP S P GS +S TI ++ NE K + D ++ KLQ +K+ LE SL
Sbjct: 428 AQPISVPSNTSIYGSCVSETICKDKEFTNEKKEMED-------IITKLQMEKSKLEASLS 480
Query: 93 SIEESHTTEFKKVKAASEKEIEDIRKAL 120
+I E H E +++I +R+AL
Sbjct: 481 TINEKHNDEITFQAEFYQRQIAFVREAL 508
>gi|410920399|ref|XP_003973671.1| PREDICTED: keratin, type I cytoskeletal 18-like [Takifugu rubripes]
Length = 409
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES---HTTEFKKVKAASEKEIED 115
E+ ++NLNDRLA YIE V+ L++ LE + E T ++ K E IED
Sbjct: 87 ERGAMQNLNDRLANYIETVRNLEHANKELEQKIMVAMEKGGPQTRDYSKY----ESIIED 142
Query: 116 I-RKALDR-ESSSKSALAIEKRRL 137
+ RK D E +++ L I+ RL
Sbjct: 143 LRRKIFDSIEDNARLVLQIDNARL 166
>gi|118430816|gb|ABK91944.1| glial fibrillary acidic protein beta [Rattus norvegicus]
Length = 331
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDQLTTNSARLEVERDNLTQDLGTLRQK 152
>gi|260813209|ref|XP_002601311.1| hypothetical protein BRAFLDRAFT_281325 [Branchiostoma floridae]
gi|229286605|gb|EEN57323.1| hypothetical protein BRAFLDRAFT_281325 [Branchiostoma floridae]
Length = 351
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 48 PLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L+ ++R EK EL LNDR A YIE V+ LQ L + I+E+ +E +
Sbjct: 24 TLADARVTRSGEKRELVVLNDRFASYIEKVRSLQERNTKLTTQI-RIQEASRSEESNISE 82
Query: 108 ASEKEIEDIRKALD 121
E E+ ++R +D
Sbjct: 83 LYETELTELRALVD 96
>gi|260813213|ref|XP_002601313.1| hypothetical protein BRAFLDRAFT_224428 [Branchiostoma floridae]
gi|229286607|gb|EEN57325.1| hypothetical protein BRAFLDRAFT_224428 [Branchiostoma floridae]
Length = 323
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++R EK EL LNDR A YIE V+ LQ L + I+E+ +E + E E+
Sbjct: 2 VTRSGEKRELVVLNDRFASYIEKVRSLQERNTKLTTQI-RIQEASRSEETNITEVYETEL 60
Query: 114 EDIRKALD 121
++R +D
Sbjct: 61 TELRVLVD 68
>gi|148702213|gb|EDL34160.1| glial fibrillary acidic protein [Mus musculus]
Length = 352
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 62 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 119 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 151
>gi|345791820|ref|XP_003433546.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4
[Canis lupus familiaris]
Length = 603
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ V+ L+ LE +SL +++ TT K ++ E I
Sbjct: 215 RTEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQ-QQTTTTSSKNLEPLFEAYI 273
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD + K L E + D + D K K
Sbjct: 274 SALRKQLDTLVNDKGRLQSELKTTQDSVEDFKTK 307
>gi|390350050|ref|XP_796075.3| PREDICTED: prelamin-A/C-like [Strongylocentrotus purpuratus]
Length = 769
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 51 PTIISRRQEKNELKNLNDRLAQYIELVQKLQN-----DKASLEYSLYSIEESHTTEFKKV 105
P +SR+QEK EL LNDR+ Y+ V+K++ D ++L S+ +E+ E +
Sbjct: 8 PAPLSRQQEKAELSELNDRMQNYLGKVKKIREQANKVDSSALLNSIRVLED----EVASL 63
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRR 136
K + E+ +R+ L+ ++ K+ + +R
Sbjct: 64 KNMYDMELNSLRRQLEDTTTLKNNAETQAQR 94
>gi|784942|emb|CAA60048.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
Length = 612
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR +EK E+ +LNDRLA YIE V+ L QN K + + L+ T KA E E
Sbjct: 88 SREREKKEISDLNDRLASYIEKVRFLDAQNRKMNNDLELFRARMGKDT--LSTKAMYEGE 145
Query: 113 IEDIRKAL 120
I + RK +
Sbjct: 146 IAEARKLI 153
>gi|225708436|gb|ACO10064.1| Keratin, type I cytoskeletal 18 [Osmerus mordax]
Length = 434
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES---HTTEFKKVKAASEKEIED 115
EK ++NLNDRLA Y+E V+ L+ A LE + ++ E + ++ K I+D
Sbjct: 117 EKGAMQNLNDRLANYLETVRTLEQANAQLEMKIRAVLEKGSPDSRDYSKYTPV----IDD 172
Query: 116 IRKALDRESSSKSALAIE 133
+RK + + S+L ++
Sbjct: 173 LRKKVFDTTVDNSSLVLQ 190
>gi|324502807|gb|ADY41232.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 586
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
SR +EK E+ +LNDRLA YIE V+ L QN K + + L+ T KA E E
Sbjct: 62 SREREKKEISDLNDRLASYIEKVRFLDAQNRKMNNDLELFRARMGKDT--LSTKAMYEGE 119
Query: 113 IEDIRKAL 120
I + RK +
Sbjct: 120 IAEARKLI 127
>gi|410922581|ref|XP_003974761.1| PREDICTED: low molecular weight neuronal intermediate filament-like
[Takifugu rubripes]
Length = 522
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V L+ LE + ++ E ++ E+EI
Sbjct: 94 IVRTNEKEQLQGLNDRFASFIEKVHNLEQQNKVLEAEV-TVLRQRNNEPSRLHELYEQEI 152
Query: 114 EDIRKALDRESSSKSALAIEKRRLLD 139
++R ++ + KS + ++ +L D
Sbjct: 153 RELRARVEELTHEKSQMHVDCVQLND 178
>gi|344252092|gb|EGW08196.1| Glial fibrillary acidic protein [Cricetulus griseus]
Length = 427
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDHLTANSARLEVERDNLAQDLGTLRQK 152
>gi|119617053|gb|EAW96647.1| keratin 4 [Homo sapiens]
Length = 608
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ VQ L+ LE ++L +++ TT K ++ E +
Sbjct: 222 RTEEREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQ-QQTTTTSSKNLEPLFETYL 280
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD + K L E + + D + D K K
Sbjct: 281 SVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTK 314
>gi|147903569|ref|NP_001079855.1| uncharacterized protein LOC379545 [Xenopus laevis]
gi|33417104|gb|AAH56020.1| MGC68948 protein [Xenopus laevis]
Length = 457
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A L + I ++ + E + ++E
Sbjct: 83 LTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVL---VTEINQAKSKEPTRASDLCQQE 139
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++R+ L+ + + +EK ++L LK +
Sbjct: 140 LRELRRQLELLGKDRDRIQVEKDNFAEDLTFLKQR 174
>gi|260821696|ref|XP_002606239.1| hypothetical protein BRAFLDRAFT_123713 [Branchiostoma floridae]
gi|229291580|gb|EEN62249.1| hypothetical protein BRAFLDRAFT_123713 [Branchiostoma floridae]
Length = 1045
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 41 QPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
Q + L + R +K+EL LNDR A +I V+ L+ L L +++
Sbjct: 103 QATQMLVSLGEVRVDRSGDKDELAGLNDRFATFINKVRYLEEMNRKLTLQLEMVQKKAGA 162
Query: 101 EFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLK 145
+ E E+ +IRK ++ ++ K+AL EK L E LK
Sbjct: 163 GGPDINKMWEAELNNIRKLIEVVNNEKNALNSEKDGLQGEAATLK 207
>gi|1334693|emb|CAA34591.1| Peripherin [Xenopus laevis]
Length = 384
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A +IE V+ L+ A L + I ++ + E + ++E
Sbjct: 10 LTTRSNEKAELQELNDRFASFIEKVRYLEQQNAVL---VTEINQARSKEPTRASDLCQQE 66
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ ++RK L+ + + +E+ ++L LK +
Sbjct: 67 LRELRKQLELLGKDRDHIQVERDNFAEDLAFLKQR 101
>gi|410932423|ref|XP_003979593.1| PREDICTED: keratin, type I cytoskeletal 13-like [Takifugu rubripes]
Length = 413
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
EK ++NLNDRLA Y+E V+ L+ A LE + ES T + +A E I D++
Sbjct: 73 EKATMQNLNDRLATYLEKVRSLEKANAELELKIRQFLESKTAPTGRDYSAYEATIADLQ 131
>gi|334347855|ref|XP_001362337.2| PREDICTED: keratin, type II cytoskeletal 4 [Monodelphis domestica]
Length = 526
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT + ++ E I
Sbjct: 141 RTEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTVTTSGRNLEPYFESYI 199
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S+ KS L E + + D + D K+K
Sbjct: 200 NCLRKQLDGLSNEKSRLLSELKVMQDSVEDFKHK 233
>gi|449491167|ref|XP_002194074.2| PREDICTED: keratin, type I cytoskeletal 20 [Taeniopygia guttata]
Length = 436
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 41 QPPRPGSPLSPT---IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEES 97
Q R LS T ++ EK+ ++NLNDRLA Y+E V+ L+ + +E + E
Sbjct: 60 QGLRGSLQLSITGSDVLLAGNEKSTMQNLNDRLAAYLERVRSLEKSNSLIERQIREWYEK 119
Query: 98 HTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLL 138
+TT + ++ K I+++R + SA +E RL+
Sbjct: 120 NTTSIGQDYSSYFKTIDELRNKI-------SAAQMENSRLV 153
>gi|410964505|ref|XP_003988794.1| PREDICTED: keratin, type II cytoskeletal 8 [Felis catus]
Length = 489
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN+R A +I+ V+ L+ LE + +++ + T + E I +
Sbjct: 94 RTQEKEQIKTLNNRFASFIDKVRHLEQQNKILE-TKWNLLQQQKTARSNMDNMFESYINN 152
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L +E + + D KNK
Sbjct: 153 LRRQLDTLGQEKLKLEVELGNMQGLVEDFKNK 184
>gi|403306229|ref|XP_003943643.1| PREDICTED: glial fibrillary acidic protein [Saimiri boliviensis
boliviensis]
Length = 462
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 95 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 151
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 152 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 184
>gi|183986237|gb|AAI66388.1| nef3 protein [Xenopus (Silurana) tropicalis]
Length = 604
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 84 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 142
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 143 LRANLELLGHDKAQILLDTEHLEEDLQRLKER 174
>gi|138519905|gb|AAI35491.1| nef3 protein [Xenopus (Silurana) tropicalis]
Length = 619
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 84 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 142
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 143 LRANLELLGHDKAQILLDTEHLEEDLQRLKER 174
>gi|432099757|gb|ELK28792.1| Vimentin [Myotis davidii]
Length = 389
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 23 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 79
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++L+ L+ K
Sbjct: 80 ELRRQVDQVTNDKARVEVERDNLAEDLMRLREK 112
>gi|301775757|ref|XP_002923293.1| PREDICTED: keratin, type II cytoskeletal 8-like [Ailuropoda
melanoleuca]
gi|281341816|gb|EFB17400.1| hypothetical protein PANDA_012426 [Ailuropoda melanoleuca]
Length = 491
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN++ A +I+ V+ L+ LE + + + + T + E I +
Sbjct: 96 RTQEKEQIKTLNNKFANFIDKVRHLEQQNKILE-TKWGLLQQQKTARSNIDNMFESYINN 154
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L +E + + D KNK
Sbjct: 155 LRRQLDTLGQEKLKLEVELGNMQGLVEDFKNK 186
>gi|1561571|emb|CAA69422.1| glial fibrillary acidic protein [Bos taurus]
Length = 428
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 61 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 117
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 118 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 150
>gi|74148566|dbj|BAE24257.1| unnamed protein product [Mus musculus]
Length = 428
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 62 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ +L L+ K
Sbjct: 119 ELRLRLDQLTANSARLEVERDNFAQDLGTLRQK 151
>gi|444521931|gb|ELV13252.1| Keratin, type II cytoskeletal 75 [Tupaia chinensis]
Length = 553
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKV 105
+ PTI R++E+ ++K LN++ A +I+ V+ L+ LE ++L + S T + +
Sbjct: 140 IDPTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQEQGSRTVR-QNL 198
Query: 106 KAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ + I D+R+ LD ++ + L E R + D + D K K
Sbjct: 199 EPLFDSYISDLRRQLDGITTERGRLEAELRNMQDVVEDFKVK 240
>gi|430721|gb|AAA20540.1| glial fibrillary acidic protein [Rattus norvegicus]
Length = 430
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDQLTTNSARLEVERDNLTQDLGTLRQK 152
>gi|281354250|gb|EFB29834.1| hypothetical protein PANDA_008470 [Ailuropoda melanoleuca]
Length = 420
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ ++ + L +E+ L +L L+ K
Sbjct: 122 ELRLRLDQLTAGSARLEVERDNLAQDLGTLRQK 154
>gi|158186732|ref|NP_058705.2| glial fibrillary acidic protein [Rattus norvegicus]
gi|115311597|sp|P47819.2|GFAP_RAT RecName: Full=Glial fibrillary acidic protein; Short=GFAP
gi|4103877|gb|AAD01873.1| glial fibrillary acidic protein alpha [Rattus norvegicus]
gi|57032786|gb|AAH88851.1| Gfap protein [Rattus norvegicus]
gi|149054423|gb|EDM06240.1| rCG33401 [Rattus norvegicus]
Length = 430
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDQLTTNSARLEVERDNLTQDLGTLRQK 152
>gi|387542816|gb|AFJ72035.1| glial fibrillary acidic protein isoform 2 [Macaca mulatta]
Length = 431
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 154
>gi|196115327|ref|NP_001124492.1| glial fibrillary acidic protein isoform 1 [Mus musculus]
Length = 428
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 62 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 118
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ +L L+ K
Sbjct: 119 ELRLRLDQLTANSARLEVERDNFAQDLGTLRQK 151
>gi|110645506|gb|AAI18833.1| nef3 protein [Xenopus (Silurana) tropicalis]
Length = 518
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 84 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 142
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 143 LRANLELLGHDKAQILLDTEHLEEDLQRLKER 174
>gi|410981373|ref|XP_003997044.1| PREDICTED: LOW QUALITY PROTEIN: glial fibrillary acidic protein
[Felis catus]
Length = 432
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 122 ELRFRLDQLTTNSARLEVERDNLAQDLGTLRQK 154
>gi|27752368|gb|AAO18221.1| glial fibrillary acidic protein [Bos taurus]
Length = 415
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 61 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 117
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 118 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 150
>gi|351706346|gb|EHB09265.1| Glial fibrillary acidic protein [Heterocephalus glaber]
Length = 448
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 16 SASRGSSSRQTSEVREEPPQPQP---QSQPPRP--------GSPLSPTIISRRQEKNELK 64
S+S + +R VR P P+P PP P G+ + +R E+ ++
Sbjct: 15 SSSSETVARGLRAVRRLGPDPRPAPAWVSPPLPARLAFSLAGALNTGFKQTRASERAQMM 74
Query: 65 NLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRES 124
LNDR A YIE V+ L+ +L L + + T V A E++++R LD+
Sbjct: 75 ELNDRFASYIEKVRFLEQQNKALAAELNQLRAAEPTRLADVYQA---ELQELRLRLDQLM 131
Query: 125 SSKSALAIEKRRLLDELLDLKNK 147
+ + + +E+ L +L L+ K
Sbjct: 132 AGSARVEVERDNLALDLGALQQK 154
>gi|301606009|ref|XP_002932603.1| PREDICTED: hypothetical protein LOC780230 [Xenopus (Silurana)
tropicalis]
Length = 914
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR A YIE V L+ +E + ++ + + + ++ E+E+ +
Sbjct: 84 RFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQALRQKQSG-YSQLGEVYEQEMRE 142
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R L+ K+ + ++ L ++L LK +
Sbjct: 143 LRANLELLGHDKAQILLDTEHLEEDLQRLKER 174
>gi|57997051|emb|CAB61354.2| hypothetical protein [Homo sapiens]
Length = 438
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELP 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|28277305|gb|AAH45233.1| Vim4 protein [Xenopus laevis]
Length = 463
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 93 NRTNEKAEMIELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+IR+ LD+ + K+ + +++ L D+L L+ K
Sbjct: 150 EIRRQLDQAINEKARVEVDRDNLGDDLQRLREK 182
>gi|138532|sp|P24790.1|VIM4_XENLA RecName: Full=Vimentin-4
gi|65209|emb|CAA34742.1| vimentin (Vim4) [Xenopus laevis]
Length = 463
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 93 NRTNEKAEMIELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+IR+ LD+ + K+ + +++ L D+L L+ K
Sbjct: 150 EIRRQLDQAINEKARVEVDRDNLGDDLQRLREK 182
>gi|397522129|ref|XP_003831131.1| PREDICTED: uncharacterized protein LOC100982526 [Pan paniscus]
Length = 1263
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT K ++ E +
Sbjct: 877 RTEEREQIKLLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTTTTSSKNLEPLFETYL 935
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD + K L E + + D + D K K
Sbjct: 936 SVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTK 969
>gi|147901438|ref|NP_001086804.1| internexin neuronal intermediate filament protein, alpha [Xenopus
laevis]
gi|50415295|gb|AAH77476.1| Ina-A-prov protein [Xenopus laevis]
Length = 467
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR YIE V +L+ LE + + + H +E ++ E+EI
Sbjct: 82 IVRTNEKEQLQGLNDRFVTYIEKVHQLEQQNKLLETEVTLLRQKH-SEPSRLSQIYEQEI 140
Query: 114 EDIRKALDRESSSK 127
++R L+ + K
Sbjct: 141 RELRSKLEEQEQDK 154
>gi|32452089|emb|CAD38118.1| keratin type I [Acipenser baerii]
Length = 451
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
++ EK ++NLNDRLA Y+E V+ L+ + LE + E+ + ++ +A K I
Sbjct: 113 LTNLNEKATMQNLNDRLATYLEKVRSLEAANSKLELQIRQFYENSSPIVQRDYSAYWKTI 172
Query: 114 EDIRKALDRESSSKSALAIEKRRLL 138
ED++ + A I+ R+L
Sbjct: 173 EDLKNKI-------GAATIDNARIL 190
>gi|354484767|ref|XP_003504558.1| PREDICTED: glial fibrillary acidic protein [Cricetulus griseus]
Length = 430
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 63 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 119
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD +++ + L +E+ L +L L+ K
Sbjct: 120 ELRLRLDHLTANSARLEVERDNLAQDLGTLRQK 152
>gi|301768783|ref|XP_002919795.1| PREDICTED: glial fibrillary acidic protein-like [Ailuropoda
melanoleuca]
Length = 432
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ ++ + L +E+ L +L L+ K
Sbjct: 122 ELRLRLDQLTAGSARLEVERDNLAQDLGTLRQK 154
>gi|296220633|ref|XP_002756397.1| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 727
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN++ A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 332 RTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLE-TKWSLLQQQKTARSNMDNMFENYINN 390
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ K L E + + D KNK
Sbjct: 391 LRRQLETLGQEKLKLEAELGNMQGLVEDFKNK 422
>gi|147903068|ref|NP_001079481.1| low molecular weight neuronal intermediate filament [Xenopus
laevis]
gi|27696268|gb|AAH43782.1| Ina-B-prov protein [Xenopus laevis]
Length = 469
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR YIE V L+ LE + + + H +E ++ E+EI
Sbjct: 82 IVRTNEKEQLQGLNDRFVTYIEKVHHLEQQNKLLESEVTLLRQKH-SEPSRLSHIYEQEI 140
Query: 114 EDIRKALDRESSSK 127
++R L+ + K
Sbjct: 141 RELRSKLEEQEQDK 154
>gi|410964485|ref|XP_003988785.1| PREDICTED: keratin, type II cytoskeletal 75-like [Felis catus]
Length = 551
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT-TEFKKVKAASEKEIE 114
R++E+ ++K LN++ A +I+ V+ L+ LE ++E + T + ++ E I
Sbjct: 146 RKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWELLQEQGSKTVRQNLEPFFEAYIN 205
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R+ LD ++ + L E R + D + D K
Sbjct: 206 DLRRQLDSVTTERGRLDAELRNMQDIVEDFK 236
>gi|405950795|gb|EKC18758.1| Non-neuronal cytoplasmic intermediate filament protein [Crassostrea
gigas]
Length = 618
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 5 SKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELK 64
S R +TP+ S +R ++ P ++ I +R +EK +++
Sbjct: 19 SSRTTVIQRTPAGSGNVMNRSSTSRLSMGPAFSTGVLAGLSHKGVNDVIQTRDREKKDMQ 78
Query: 65 NLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRES 124
LN+R A YIE V+ L+ +L + +++ + ++K E+EI + R +D S
Sbjct: 79 GLNERFASYIEKVRFLEAQNKALLAEIDRLKKLKGFDVSEIKELYEQEIAESRNVIDELS 138
Query: 125 SSKSAL 130
K+
Sbjct: 139 KEKAKF 144
>gi|390463672|ref|XP_002748637.2| PREDICTED: keratin, type I cytoskeletal 20 [Callithrix jacchus]
Length = 577
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK ++NLNDRLA Y+E V+ L+ + LE + +++ + +A ++IE++R
Sbjct: 223 EKMTMQNLNDRLASYLEKVRALEQSNSKLEVQIKQWHQTNAPSGGRDYSAYYRQIEELRN 282
Query: 119 ALDRESSSKSALAI 132
+ +++ K+A I
Sbjct: 283 QI-KDAQLKNARCI 295
>gi|426238193|ref|XP_004013041.1| PREDICTED: LOW QUALITY PROTEIN: glial fibrillary acidic protein
[Ovis aries]
Length = 421
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 49 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 105
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 106 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 138
>gi|45384378|ref|NP_990263.1| keratin, type II cytoskeletal cochleal [Gallus gallus]
gi|34922442|sp|O93532.1|K2CO_CHICK RecName: Full=Keratin, type II cytoskeletal cochleal; AltName:
Full=Cytokeratin otokeratin
gi|3746660|gb|AAC64042.1| otokeratin [Gallus gallus]
Length = 492
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN+R A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 111 RKEEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQKTTRSNIVPMFEAYITN 169
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E R + D + D K K
Sbjct: 170 LRRQLDGLLNDKGRLEGELRNMQDLVEDFKAK 201
>gi|393911392|gb|EFO27005.2| intermediate filament protein [Loa loa]
Length = 581
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK E+ +LNDRLA YIE V+ L+ L L + + +K E E+
Sbjct: 65 AREREKKEMSDLNDRLADYIEKVRFLEAQNRKLNADLDMLRGRWGKDTSSIKIMFEGELS 124
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +K ++ ++ L + +++ +EL + + K
Sbjct: 125 EAQKVINDTGKQRNELEKQIKKMQEELAEYRRK 157
>gi|395826198|ref|XP_003786306.1| PREDICTED: glial fibrillary acidic protein isoform 1 [Otolemur
garnettii]
Length = 433
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 66 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRSKEPTKLADVYQA---ELR 122
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 123 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 155
>gi|255522861|ref|NP_001157333.1| glial fibrillary acidic protein [Equus caballus]
Length = 427
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 60 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 116
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 117 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 149
>gi|113205970|ref|NP_776490.2| glial fibrillary acidic protein [Bos taurus]
gi|143811396|sp|Q28115.2|GFAP_BOVIN RecName: Full=Glial fibrillary acidic protein; Short=GFAP
gi|112362001|gb|AAI19893.1| Glial fibrillary acidic protein [Bos taurus]
gi|296476222|tpg|DAA18337.1| TPA: glial fibrillary acidic protein [Bos taurus]
Length = 428
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 61 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 117
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 118 ELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 150
>gi|395835419|ref|XP_003790677.1| PREDICTED: keratin, type II cytoskeletal 8 [Otolemur garnettii]
Length = 550
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK E+K LN++ A +I+ V+ L+ LE + +++ + T + + E I +
Sbjct: 94 RTQEKEEIKTLNNKFASFIDKVRFLEQQNKMLE-TKWNLLQQQKTARSNMDSMFESYINN 152
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L E + + D KNK
Sbjct: 153 LRRQLDTLGQEKLKLEAELGNMQGLVEDFKNK 184
>gi|549452|sp|P35617.1|XNIF_XENLA RecName: Full=Low molecular weight neuronal intermediate filament;
AltName: Full=XNIF
gi|1107470|gb|AAA83019.1| neuronal intermediate filament protein [Xenopus laevis]
Length = 470
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR YIE V L+ LE + + + H +E ++ E+EI
Sbjct: 83 IVRTNEKEQLQGLNDRFVTYIEKVHHLEQQNKLLESEVTLLRQKH-SEPSRLSHIYEQEI 141
Query: 114 EDIRKALDRESSSK 127
++R L+ + K
Sbjct: 142 RELRSKLEEQEQDK 155
>gi|344277646|ref|XP_003410611.1| PREDICTED: vimentin-like [Loxodonta africana]
Length = 466
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 99 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 155
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L +++ L+ K
Sbjct: 156 ELRRQVDQLTNDKARVEVERDNLAEDITRLREK 188
>gi|55742164|ref|NP_001006716.1| keratin 5, gene 4 [Xenopus (Silurana) tropicalis]
gi|49522416|gb|AAH75443.1| keratin 5, gene 4 [Xenopus (Silurana) tropicalis]
Length = 631
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 48 PLSPTII-----SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT--- 99
PL+ TI + +E+ ++K LN++ A YI+ V+ L+ LE ++E T
Sbjct: 176 PLNLTIDPNVQKVKTEEREQIKTLNNKFAAYIDKVRFLEQQNKVLETKWKLLQEQGTKGS 235
Query: 100 TEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKN 146
T+ ++ EK I D+R+ LD L EK RLL EL +L++
Sbjct: 236 TKRASLEPLFEKYIGDLRRYLD-------TLTNEKARLLQELKNLQD 275
>gi|52785|emb|CAA27207.1| unnamed protein product [Mus musculus]
Length = 524
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT K + E I
Sbjct: 143 RTAEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTTTTSPKSLDPFFETYI 201
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S+ K L E + + D + D K K
Sbjct: 202 NALRKNLDTLSNDKGRLQSELKMMQDSVEDFKTK 235
>gi|432917283|ref|XP_004079488.1| PREDICTED: vimentin-like [Oryzias latipes]
Length = 455
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 50 SPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAAS 109
S + +R EK ++++LNDR A YIE V+ L+ L L +E+ ++
Sbjct: 81 SEFLTNRTNEKAQMQSLNDRFASYIEKVRFLEQQNKIL---LAELEQLRGKGTSRIGDLY 137
Query: 110 EKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E E+ ++R+ +D+ ++ K+ + + + L D++ L+ K
Sbjct: 138 EDEMRELRRQVDQLTNEKARVEVHRDNLADDIERLREK 175
>gi|228609|prf||1807305A vimentin
Length = 455
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 29 VREEPPQPQPQSQPPRPGSPLSPTI-----ISRRQEKNELKNLNDRLAQYIELVQKLQND 83
VR P P+ ++ G L+ I +R EK E+++LNDR A YI+ V+ L+
Sbjct: 61 VRSSGPLPRLATETLDFG--LADAINTEFKTNRTNEKAEMQHLNDRFASYIDKVRFLEQQ 118
Query: 84 KASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLD 143
L + +E+ +V E E+ ++R+ +D+ ++ K+ + +++ L +++
Sbjct: 119 NKIL---IAELEQMRGKGSSRVGDLYEDEMRELRRQVDQLTNEKATVEVDRDNLGEDIER 175
Query: 144 LKNK 147
LK K
Sbjct: 176 LKEK 179
>gi|149032095|gb|EDL87007.1| peripherin 1, isoform CRA_d [Rattus norvegicus]
gi|149032096|gb|EDL87008.1| peripherin 1, isoform CRA_d [Rattus norvegicus]
Length = 244
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
+ +R EK EL+ LNDR A +IE V+ L+ A+L L
Sbjct: 94 LATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGEL 132
>gi|426224546|ref|XP_004006430.1| PREDICTED: peripherin [Ovis aries]
Length = 476
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL+ LNDR A YIE V+ L+ A+L + ++ T +V E+E
Sbjct: 97 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPT---RVAEIYEEE 153
Query: 113 IEDIRKALDRESSSKSALAIEK 134
+ ++R+ ++ ++ ++ + +E+
Sbjct: 154 LRELRRQVEVLTNQRARVDVER 175
>gi|148221985|ref|NP_001080907.1| vimentin-4 [Xenopus laevis]
gi|32450567|gb|AAH54161.1| Vim4 protein [Xenopus laevis]
Length = 463
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A +I+ V+ L+ L L ++ T+ ++ E+E+
Sbjct: 93 NRTYEKAEMIELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTS---RIGDLYEEEMR 149
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+IR+ LD+ + K+ + +++ L D+L L+ K
Sbjct: 150 EIRRQLDQAINEKARVEVDRDNLGDDLQRLREK 182
>gi|326919555|ref|XP_003206045.1| PREDICTED: keratin, type II cytoskeletal cochleal-like [Meleagris
gallopavo]
Length = 492
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R++EK ++K LN+R A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 111 RKEEKEQIKTLNNRFASFIDKVRFLEQQNKMLE-TKWSLLQDQKTTRSNIVPMFEAYISN 169
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD + K L E R + D + D K K
Sbjct: 170 LRRQLDGLLNDKGRLEGELRNMQDLVEDFKAK 201
>gi|16265836|gb|AAL16662.1|AF419299_1 glial fibrillary acidic protein [Homo sapiens]
Length = 432
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|74214018|dbj|BAE29426.1| unnamed protein product [Mus musculus]
Length = 405
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 38 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 94
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 95 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 127
>gi|185135325|ref|NP_001117848.1| keratin, type I cytoskeletal 13 [Oncorhynchus mykiss]
gi|82102442|sp|Q8JFQ6.1|K1C13_ONCMY RecName: Full=Keratin, type I cytoskeletal 13; AltName:
Full=Cytokeratin-13; Short=CK-13; AltName:
Full=Keratin-13; Short=K13
gi|20520616|emb|CAD20810.1| Keratin 13 [Oncorhynchus mykiss]
Length = 492
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
EK ++NLNDRL+ Y+E V+KL+ A LE + ES T+
Sbjct: 117 EKATMQNLNDRLSTYLEKVRKLEAANAELELKIRQFMESKTS 158
>gi|62896925|dbj|BAD96403.1| glial fibrillary acidic protein variant [Homo sapiens]
Length = 432
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|38566198|gb|AAH62609.1| GFAP protein, partial [Homo sapiens]
Length = 431
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 64 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 120
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 121 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 153
>gi|10697039|emb|CAC12741.1| intermediate filament protein [Glottidia pyramidata]
Length = 620
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R +EK+++++LN+RLA YIE V+ L+ L L +++ E VK E E+
Sbjct: 110 TREREKHDMQDLNERLASYIEKVRFLEAQNRKLSAELDALKAKWGKETAAVKTMYEDELS 169
Query: 115 DIRKALD 121
+R+ D
Sbjct: 170 GLRRDRD 176
>gi|4503979|ref|NP_002046.1| glial fibrillary acidic protein isoform 1 [Homo sapiens]
gi|121135|sp|P14136.1|GFAP_HUMAN RecName: Full=Glial fibrillary acidic protein; Short=GFAP
gi|183075|gb|AAA52528.1| glial fibrillary acidic protein [Homo sapiens]
gi|251802|gb|AAB22581.1| glial fibrillary acidic protein [Homo sapiens]
gi|15488941|gb|AAH13596.1| Glial fibrillary acidic protein [Homo sapiens]
gi|27695487|gb|AAH41765.1| Glial fibrillary acidic protein [Homo sapiens]
gi|119571955|gb|EAW51570.1| glial fibrillary acidic protein, isoform CRA_d [Homo sapiens]
gi|119571956|gb|EAW51571.1| glial fibrillary acidic protein, isoform CRA_d [Homo sapiens]
gi|189067853|dbj|BAG37791.1| unnamed protein product [Homo sapiens]
gi|208966370|dbj|BAG73199.1| glial fibrillary acidic protein [synthetic construct]
gi|325463815|gb|ADZ15678.1| glial fibrillary acidic protein [synthetic construct]
gi|227708|prf||1709325A glial fibrillary acidic protein
Length = 432
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLATVRQK 154
>gi|348518119|ref|XP_003446579.1| PREDICTED: desmin-like isoform 1 [Oreochromis niloticus]
Length = 470
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL++LNDR A YIE V+ L+ +L + +E E ++ E+E
Sbjct: 101 LTTRTNEKAELQHLNDRFASYIEKVRFLEQQNQAL---VVEVERLRGREPTRIADLYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEK 134
+ ++R+ ++ ++ +S + +E+
Sbjct: 158 MSELRRQVEILTNQRSRIEVER 179
>gi|410928652|ref|XP_003977714.1| PREDICTED: uncharacterized protein LOC101066983 [Takifugu rubripes]
Length = 1199
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK+++ NLN RL Y+ V+ L+ + L + ++ S E + K EK+++ R
Sbjct: 14 EEKHQMLNLNQRLESYLSRVKLLEEENILLTKEIQALRGSTHNEVTQRKGL-EKKLQQAR 72
Query: 118 KALDRESSSKSALAIEKRRLLDELLDL 144
+D ++ + +E RL++EL DL
Sbjct: 73 LEVDSAWRERAHMELEVGRLMEELQDL 99
>gi|410922651|ref|XP_003974796.1| PREDICTED: neurofilament light polypeptide-like [Takifugu rubripes]
Length = 532
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK EL++LN+R +IE V L+ LE L + + T ++A E EI+
Sbjct: 95 RTQEKAELQDLNNRFVSFIERVHDLEQQNKLLETELQLLRQRQTDP-SNLRALYEHEIQQ 153
Query: 116 IRKALD 121
+ A+D
Sbjct: 154 LHAAVD 159
>gi|444512252|gb|ELV10096.1| Glial fibrillary acidic protein [Tupaia chinensis]
Length = 391
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 24 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 80
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 81 ELRLRLDQLTANSARLEVERDNLAQDLTTLRQK 113
>gi|268531342|ref|XP_002630797.1| C. briggsae CBR-IFB-1 protein [Caenorhabditis briggsae]
Length = 558
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK L+ LNDRL YI+ V+KL+ L L + + ++K + + R
Sbjct: 49 KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTAR 108
Query: 118 KALDRESSSKSALAIEKRRLLDEL 141
K +D + K+ + ++ +RL D+L
Sbjct: 109 KDIDDAARRKAEIDVKVQRLKDDL 132
>gi|410932255|ref|XP_003979509.1| PREDICTED: neurofilament medium polypeptide-like [Takifugu
rubripes]
Length = 810
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R EK +L+ LNDR YI+ V L+ +E + ++ + T ++ ++E+++
Sbjct: 79 RSNEKEQLQGLNDRFVVYIDKVHYLEQQNQQIEAEIQALRQRQVTR-TQLGDLYDQELQE 137
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R AL++ K+ + ++ L +++ L+++
Sbjct: 138 LRAALEQIHRDKTQIQLDSEHLEEDIQRLRDR 169
>gi|169146740|emb|CAQ15183.1| novel intermediate filament protein [Danio rerio]
Length = 342
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 29 VREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLE 88
+R EP Q QS + + + R QE+ +L LN+R A YIE V+ L+ +L
Sbjct: 3 MRLEPLQRWDQSDLSQASLVNAELLDLRAQEREQLVGLNNRFASYIEKVRHLEQQNRALL 62
Query: 89 YSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLD 139
L ++ + +V+ +E+ +R+ L +E+ +K+ + ++ +L D
Sbjct: 63 LQLEALRRRQSQP-SRVQQLYLQEVRGLREQLHQEAQNKARMEVQMEKLRD 112
>gi|348559959|ref|XP_003465782.1| PREDICTED: glial fibrillary acidic protein-like [Cavia porcellus]
Length = 437
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ ++ LNDR A YIE V+ L+ +L L + + T V A E+
Sbjct: 70 TRASERAQMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAAEPTRLADVYQA---ELR 126
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ ++ + L +E+ L +L L+ K
Sbjct: 127 ELRLRLDQLTAGSARLEVERDNLAQDLGTLRQK 159
>gi|338711929|ref|XP_001917527.2| PREDICTED: keratin, type I cytoskeletal 20-like [Equus caballus]
Length = 428
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 46 GSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKV 105
G LS + EK ++NLNDRLA Y+E V+ L+ LE + E++ +
Sbjct: 63 GGDLSGGDLLVGNEKMAMQNLNDRLASYLEKVRSLEQSNLHLEVQIRQWNETNAPSASRD 122
Query: 106 KAASEKEIEDIR 117
+A K+IE +R
Sbjct: 123 YSAYYKQIEALR 134
>gi|410916417|ref|XP_003971683.1| PREDICTED: desmin-like [Takifugu rubripes]
Length = 505
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
I +R E+ E+ NLNDRLA YIE V+ L++ LE + ++ +T
Sbjct: 98 IKARTSERQEMVNLNDRLAVYIEKVRTLESKNKLLETEIEALRSRYT 144
>gi|311267256|ref|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Sus scrofa]
Length = 460
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLE 88
EK L+ LNDRLA+Y+E V++L+ D A LE
Sbjct: 108 EKETLQFLNDRLAKYLEKVRQLEQDNAELE 137
>gi|125849603|ref|XP_696736.2| PREDICTED: keratin, type II cytoskeletal 8 [Danio rerio]
Length = 438
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
+ P I + R QEK ++K+LN+R A +I+ V+ L+ LE + + + ++ T V+
Sbjct: 68 IDPNIQMVRTQEKEQIKSLNNRFATFIDKVRFLEQQNKMLE-TKWELLQTQTPGRSNVEP 126
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E + ++R+ +D ++ ++ L E R + + D K+K
Sbjct: 127 MFEAYMANLRRQMDVVNNDRTKLDGELRNMQGLVEDFKHK 166
>gi|75052467|sp|Q28810.1|K2C8_POTTR RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin-8; Short=CK-8; AltName: Full=Keratin-8;
Short=K8; AltName: Full=Type-II keratin Kb8
gi|437903|emb|CAA50316.1| keratin 8 [Potorous tridactylus]
Length = 310
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 49 LSPTI-ISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKA 107
L P+I R QEK ++K LN++ A +I+ V+ L+ LE +++ T++ +
Sbjct: 81 LDPSIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKILETKWSFLQQQKTSQ-SNLDG 139
Query: 108 ASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
EK I ++R+ LD K L +E + + D K K
Sbjct: 140 LFEKYITNLRRQLDSMGQEKLKLEVELGNMQGLVEDFKKK 179
>gi|341900311|gb|EGT56246.1| hypothetical protein CAEBREN_21733 [Caenorhabditis brenneri]
Length = 589
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK L+ LNDRL YI+ V+KL+ L L + + ++K + + R
Sbjct: 80 KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTAR 139
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K +D + K+ + ++ +RL D+L + +++
Sbjct: 140 KDIDDAARRKAEVDVKVQRLKDDLAEYRSR 169
>gi|363743545|ref|XP_003642867.1| PREDICTED: keratin, type I cytoskeletal 42 [Gallus gallus]
Length = 515
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSL 91
EK ++NLNDRLA Y++ V++L+ D A LE +
Sbjct: 97 EKITMQNLNDRLASYLDKVRRLEEDNAQLELHI 129
>gi|212995|gb|AAC38008.1| keratin [Carassius auratus]
Length = 455
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTT 100
EK ++NLNDRLA Y+E V+ L+ A LE + ES T+
Sbjct: 105 EKATMQNLNDRLASYLEKVRSLEKANADLELKIRQFMESKTS 146
>gi|155369696|ref|NP_001094477.1| keratin, type II cytoskeletal 6A [Rattus norvegicus]
gi|123781839|sp|Q4FZU2.1|K2C6A_RAT RecName: Full=Keratin, type II cytoskeletal 6A; AltName:
Full=Cytokeratin-6A; Short=CK-6A; AltName:
Full=Keratin-6A; Short=K6A; AltName: Full=Type-II
keratin Kb6
gi|71051822|gb|AAH99121.1| LOC683313 protein [Rattus norvegicus]
Length = 552
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 49 LSPTII-SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK-VK 106
+ PTI R +E+ ++K LN++ A +I+ V+ L+ L+ ++E T ++ ++
Sbjct: 141 IDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWALLQEQGTKTVRQGLE 200
Query: 107 AASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
E+ I D+RK LD + L E R + + D K+K
Sbjct: 201 TLFEQYINDLRKELDNILGQRGRLDSELRNMQGTVEDYKSK 241
>gi|341875801|gb|EGT31736.1| hypothetical protein CAEBREN_28968 [Caenorhabditis brenneri]
Length = 558
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK L+ LNDRL YI+ V+KL+ L L + + ++K + + R
Sbjct: 49 KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTAR 108
Query: 118 KALDRESSSKSALAIEKRRLLDEL 141
K +D + K+ + ++ +RL D+L
Sbjct: 109 KDIDDAARRKAEVDVKVQRLKDDL 132
>gi|348518121|ref|XP_003446580.1| PREDICTED: desmin-like isoform 2 [Oreochromis niloticus]
Length = 489
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+ +R EK EL++LNDR A YIE V+ L+ +L + +E E ++ E+E
Sbjct: 101 LTTRTNEKAELQHLNDRFASYIEKVRFLEQQNQAL---VVEVERLRGREPTRIADLYEEE 157
Query: 113 IEDIRKALDRESSSKSALAIEK 134
+ ++R+ ++ ++ +S + +E+
Sbjct: 158 MSELRRQVEILTNQRSRIEVER 179
>gi|308493469|ref|XP_003108924.1| CRE-IFB-1 protein [Caenorhabditis remanei]
gi|308247481|gb|EFO91433.1| CRE-IFB-1 protein [Caenorhabditis remanei]
Length = 589
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 58 QEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
+EK L+ LNDRL YI+ V+KL+ L L + + ++K + + R
Sbjct: 80 KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTAR 139
Query: 118 KALDRESSSKSALAIEKRRLLDELLDLKNK 147
K +D + K+ + ++ +RL D+L + +++
Sbjct: 140 KDIDDAARRKAEIDVKVQRLKDDLAEYRSR 169
>gi|149714797|ref|XP_001504527.1| PREDICTED: keratin, type II cytoskeletal 79 [Equus caballus]
Length = 535
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE---SHTTEFKKVKAASEKE 112
R QE+ ++K LN++ A +I+ V+ L+ LE ++E S ++ E
Sbjct: 139 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQGQSSGVTRNNLEPLFENY 198
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +R+ LD S + L E R + D++ D KNK
Sbjct: 199 LGSLRRQLDTLQSERGRLDSELRNVQDQVEDFKNK 233
>gi|150383441|sp|Q58EE9.2|GFAP_DANRE RecName: Full=Glial fibrillary acidic protein; Short=GFAP
Length = 444
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + E ++ ++E+
Sbjct: 77 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQL---RGKEPSRLGDIYQEELR 133
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 134 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 166
>gi|37722304|gb|AAN87836.1| glial fibrillary acidic protein [Danio rerio]
gi|37722306|gb|AAN87837.1| glial fibrillary acidic protein [Danio rerio]
Length = 444
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + E ++ ++E+
Sbjct: 77 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQL---RGKEPSRLGDIYQEELR 133
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 134 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 166
>gi|148672071|gb|EDL04018.1| keratin 4, isoform CRA_b [Mus musculus]
Length = 538
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT K + E I
Sbjct: 156 RTAEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTTTTSPKSLDPFFETYI 214
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S+ K L E + + D + D K K
Sbjct: 215 NALRKNLDTLSNDKGRLQSELKMMQDSVEDFKTK 248
>gi|38374177|gb|AAR19286.1| class III intermediate filament protein [Danio rerio]
Length = 444
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L + + + E ++ ++E+
Sbjct: 77 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKML---VAELNQLRGKEPSRLGDIYQEELR 133
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 134 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 166
>gi|440899557|gb|ELR50845.1| Glial fibrillary acidic protein [Bos grunniens mutus]
Length = 430
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 42 PPRPGSPLSPTIIS-----RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEE 96
P R L+ + S R E+ E+ LNDR A YIE V+ L+ +L L +
Sbjct: 45 PARVDFSLAGALNSGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRA 104
Query: 97 SHTTEFKKVKAASEKEIEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
T+ V A E+ ++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 105 KEPTKLADVYQA---ELRELRLRLDQLTANSARLEVERDNLAQDLGTLRQK 152
>gi|345791841|ref|XP_003433551.1| PREDICTED: keratin, type II cytoskeletal 75 [Canis lupus
familiaris]
Length = 551
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT-TEFKKVKAASEKEIE 114
R++E+ ++K LN++ A +I+ V+ L+ LE ++E + T + ++ + I
Sbjct: 146 RKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWELLQEQGSKTVRQNLEPFFDTYIN 205
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLK 145
D+R+ LD ++ + L E R + D + D K
Sbjct: 206 DLRRQLDSVTTERGRLDAELRNMQDVVEDFK 236
>gi|66393075|ref|NP_571448.2| glial fibrillary acidic protein [Danio rerio]
gi|61644554|gb|AAH91942.1| Glial fibrillary acidic protein [Danio rerio]
gi|182888788|gb|AAI64211.1| Gfap protein [Danio rerio]
Length = 444
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + + + ++E+
Sbjct: 77 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQLRGKEPSRLGDI---YQEELR 133
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 134 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 166
>gi|46329793|gb|AAH68410.1| Gfap protein, partial [Danio rerio]
Length = 443
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + E ++ ++E+
Sbjct: 76 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQL---RGKEPSRLGDIYQEELR 132
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 133 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 165
>gi|9844635|emb|CAC03998.1| intermediate filament protein B [Styela clava]
Length = 485
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 2 SGRSKRG-ATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRR-QE 59
SG + G AT K G S Q + V E Q P I+S R +E
Sbjct: 71 SGYATSGYATYGKLNRYGYGEGSIQATSVSESFAQL--------------PGILSTRSEE 116
Query: 60 KNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKA 119
K EL LN+R A YI+ V++L++ +L + +E + T + + E+ +R+
Sbjct: 117 KQELSVLNNRFATYIDKVRRLESQNRALATKITELESTRTV-VSRSGDIYDDELARLRRE 175
Query: 120 LDRESSSKSALAIEKRRLLDELLDLKNK 147
+++ + K+ I+ + EL D + +
Sbjct: 176 IEKLTHDKAEAEIQLHNCVMELKDCEKR 203
>gi|39850082|gb|AAH64008.1| Krt4 protein [Mus musculus]
Length = 540
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R E+ ++K LN++ A +I+ V+ L+ LE ++L +++ TT K + E I
Sbjct: 158 RTAEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQ-QQTTTTSPKSLDPFFETYI 216
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD S+ K L E + + D + D K K
Sbjct: 217 NALRKNLDTLSNDKGRLQSELKMMQDSVEDFKTK 250
>gi|346986349|ref|NP_001231326.1| glial fibrillary acidic protein [Sus scrofa]
Length = 428
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 61 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 117
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L L+ K
Sbjct: 118 ELRLRLDQLTANGARLEVERDNLAQDLGTLRQK 150
>gi|194387942|dbj|BAG61384.1| unnamed protein product [Homo sapiens]
Length = 520
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ VQ L+ LE ++L +++ TT K ++ E +
Sbjct: 134 RTEEREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQ-QQTTTTSSKNLEPLFETYL 192
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD + K L E + + D + D K K
Sbjct: 193 SVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTK 226
>gi|348532754|ref|XP_003453871.1| PREDICTED: keratin, type I cytoskeletal 13-like [Oreochromis
niloticus]
Length = 456
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIR 117
EK ++NLNDRLA Y+E V+ L+ LE + E+ T+ + +A E I D+R
Sbjct: 111 EKATMQNLNDRLASYLEKVRMLEKANGELELKIRQFLETKTSPSARDYSAYEATIADLR 169
>gi|72679718|gb|AAI00729.1| Gfap protein, partial [Mus musculus]
gi|75517336|gb|AAI01969.1| Gfap protein, partial [Mus musculus]
Length = 417
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 7 RGATPAK-TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKN 65
RG P++ + R S SR T PP P + G+ + +R E+ E+
Sbjct: 7 RGLGPSRQLGTMPRFSLSRMT------PPLP-ARVDFSLAGALNAGFKETRASERAEMME 59
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDR A YIE V+ L+ +L L + T+ V A E+ ++R LD+ ++
Sbjct: 60 LNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELRELRLRLDQLTA 116
Query: 126 SKSALAIEKRRLLDELLDLKNK 147
+ + L +E+ +L L+ K
Sbjct: 117 NSARLEVERDNFAQDLGTLRQK 138
>gi|312068121|ref|XP_003137065.1| intermediate filament protein [Loa loa]
Length = 531
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKL--QNDKASLEYSLYSIEESHTTEFKKVKAASEKE 112
+R +EK E+ +LNDRLA YIE V+ L QN K + + + T K + A +
Sbjct: 65 AREREKKEMSDLNDRLADYIEKVRFLEAQNRKLNADLDMLRGRWGKDTSTTKARLADRDK 124
Query: 113 IEDIRKALDRESSSKSALAIEKRRL 137
I+++ AL S+ ++ + + +RR+
Sbjct: 125 IDELLVAL---SNIEAEINLLRRRI 146
>gi|84000448|ref|NP_034407.2| glial fibrillary acidic protein isoform 2 [Mus musculus]
gi|146345423|sp|P03995.4|GFAP_MOUSE RecName: Full=Glial fibrillary acidic protein; Short=GFAP
gi|187954281|gb|AAI39358.1| Glial fibrillary acidic protein [Mus musculus]
gi|187954283|gb|AAI39359.1| Glial fibrillary acidic protein [Mus musculus]
Length = 430
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 7 RGATPAK-TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKN 65
RG P++ + R S SR T PP P + G+ + +R E+ E+
Sbjct: 20 RGLGPSRQLGTMPRFSLSRMT------PPLP-ARVDFSLAGALNAGFKETRASERAEMME 72
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDR A YIE V+ L+ +L L + T+ V A E+ ++R LD+ ++
Sbjct: 73 LNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELRELRLRLDQLTA 129
Query: 126 SKSALAIEKRRLLDELLDLKNK 147
+ + L +E+ +L L+ K
Sbjct: 130 NSARLEVERDNFAQDLGTLRQK 151
>gi|72679940|gb|AAI00738.1| Gfap protein, partial [Mus musculus]
gi|73769823|gb|AAI03572.1| Gfap protein, partial [Mus musculus]
Length = 415
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 7 RGATPAK-TPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEKNELKN 65
RG P++ + R S SR T PP P + G+ + +R E+ E+
Sbjct: 5 RGLGPSRQLGTMPRFSLSRMT------PPLP-ARVDFSLAGALNAGFKETRASERAEMME 57
Query: 66 LNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDRESS 125
LNDR A YIE V+ L+ +L L + T+ V A E+ ++R LD+ ++
Sbjct: 58 LNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELRELRLRLDQLTA 114
Query: 126 SKSALAIEKRRLLDELLDLKNK 147
+ + L +E+ +L L+ K
Sbjct: 115 NSARLEVERDNFAQDLGTLRQK 136
>gi|51066|emb|CAA26571.1| glial fibrillary acidic protein [Mus musculus]
Length = 418
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 50 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 106
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ +L L+ K
Sbjct: 107 ELRLRLDQLTANSARLEVERDNFAQDLGTLRQK 139
>gi|124504410|gb|AAI28804.1| Gfap protein [Danio rerio]
Length = 443
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L + + + ++E+
Sbjct: 76 TRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQLRGKEPSRLGDI---YQEELR 132
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D ++ K+ L IE+ L +L LK +
Sbjct: 133 ELRRQVDGLNAGKARLEIERDNLASDLGTLKQR 165
>gi|441632437|ref|XP_003252501.2| PREDICTED: keratin, type II cytoskeletal 79 [Nomascus leucogenys]
Length = 570
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESH---TTEFKKVKAASEKE 112
R QE+ ++K LN++ A +I+ V+ L+ LE ++E ++ E
Sbjct: 139 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQGQNLGVTRNNLEPLFEAY 198
Query: 113 IEDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+ +R LDR S + L E R + D + D KNK
Sbjct: 199 LGSMRSTLDRLQSERGRLDSELRNVQDLVEDFKNK 233
>gi|395136658|gb|AFN52412.1| cytokeratn 8 protein [Bubalus bubalis]
Length = 471
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN++ A +I+ V+ L+ LE + +++ + T + E I +
Sbjct: 95 RTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLE-TKWNLLQQQKTARSNIDNMFESYINN 153
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ L+ + K L +E + + D K K
Sbjct: 154 LRRQLETLAQEKLKLEVELGNMQGLVEDFKTK 185
>gi|348508990|ref|XP_003442035.1| PREDICTED: glial fibrillary acidic protein [Oreochromis niloticus]
Length = 451
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK E+ LNDR A YIE V+ L+ L L ++ + + ++E+
Sbjct: 85 TRTNEKMEMMGLNDRFASYIEKVRLLEQQNKVLVAELNQLKGKEPSRLGDI---YQEELR 141
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D +++K+ + IE+ L ++ LK K
Sbjct: 142 ELRRQVDGLTNNKARMEIERDNLAADVAALKQK 174
>gi|400977240|pdb|3SSU|A Chain A, Crystal Structure Of Vimentin Coil1a1B FRAGMENT
gi|400977241|pdb|3SSU|B Chain B, Crystal Structure Of Vimentin Coil1a1B FRAGMENT
Length = 93
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 3 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 59
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 60 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 92
>gi|393909086|gb|EFO24363.2| intermediate filament protein B [Loa loa]
gi|393909087|gb|EJD75312.1| intermediate filament protein B, variant [Loa loa]
Length = 505
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 63 LKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKALDR 122
++ LNDRL YI+ V+KL+ L L + + ++K + D RK +D
Sbjct: 1 MQGLNDRLGNYIDRVKKLEEQNRKLVADLEELRGRWGKDTSEIKIQYSDSLRDARKEIDD 60
Query: 123 ESSSKSALAIEKRRLLDELLDLKNK 147
+ K+ + ++ RL D+L +++++
Sbjct: 61 GARRKAEIDVKVARLRDDLAEIRSR 85
>gi|432957540|ref|XP_004085845.1| PREDICTED: keratin, type I cytoskeletal 13-like [Oryzias latipes]
Length = 419
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRK 118
EK ++NLNDRLA Y+E V++L+ A LE + ES + + K I +IR
Sbjct: 69 EKFTMQNLNDRLATYLEKVRRLEKANADLELKIRQFVESKVGPTTRDYSHFFKTIAEIRA 128
Query: 119 ALDRESSSKSA---LAIEKRRL 137
+ E++SK+ L+++ RL
Sbjct: 129 KI-LEATSKNGAVHLSLDNARL 149
>gi|113013930|gb|ABI29893.1| neurofilament subunit NF-L [Petromyzon marinus]
Length = 474
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 40 SQPPRPGSPLSPTIISRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHT 99
SQ G+ L R QEK++L++LNDR A +IE V L+ LE + +
Sbjct: 80 SQAESLGNELKSI---RTQEKDQLQDLNDRFAGFIERVHHLEQQNKVLEAEALILRQK-- 134
Query: 100 TEFK--KVKAASEKEIEDIRKALDRESSSK 127
E + +K E+EI D+R AL E S+
Sbjct: 135 -EMRPSNIKQLYEQEIRDLR-ALAEECKSE 162
>gi|297691937|ref|XP_002823328.1| PREDICTED: keratin, type II cytoskeletal 72-like [Pongo abelii]
Length = 214
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKK-VKAASEKEIE 114
R QE+ ++K LN++ A +I+ V+ L+ LE +++ +K ++ E I
Sbjct: 122 RAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWNLLQQLDLNNCRKNLEPIYEGYIS 181
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++RK L+ S + L +E R + D + D K +
Sbjct: 182 NMRKQLEMLSGDRVRLDLELRNMQDLVEDYKKR 214
>gi|197100001|ref|NP_001125791.1| glial fibrillary acidic protein [Pongo abelii]
gi|75061841|sp|Q5RA72.1|GFAP_PONAB RecName: Full=Glial fibrillary acidic protein; Short=GFAP
gi|55729203|emb|CAH91338.1| hypothetical protein [Pongo abelii]
Length = 432
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R E+ E+ LNDR A YIE V+ L+ +L L + T+ V A E+
Sbjct: 65 TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQA---ELR 121
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R LD+ +++ + L +E+ L +L ++ K
Sbjct: 122 ELRLRLDQLTANSARLEVERDNLAQDLGTVRQK 154
>gi|860908|emb|CAA60679.1| vimentin [Cricetulus griseus]
Length = 380
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIE 114
+R EK EL+ LNDR A YI+ V+ L+ L L +E+ ++ E+E+
Sbjct: 13 TRTNEKVELQELNDRFANYIDKVRFLEQQNKIL---LAELEQLKGQGKSRLGDLYEEEMR 69
Query: 115 DIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
++R+ +D+ ++ K+ + +E+ L ++++ L+ K
Sbjct: 70 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 102
>gi|432112593|gb|ELK35309.1| Keratin, type II cytoskeletal 8 [Myotis davidii]
Length = 486
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIED 115
R QEK ++K LN++ A +I+ V+ L+ LE + +S+ + T + E I +
Sbjct: 93 RNQEKEQIKTLNNKFASFIDKVRSLEQQNKILE-TKWSLLQQQKTTRSNMDNMFESYINN 151
Query: 116 IRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+R+ LD K L E + + DLKNK
Sbjct: 152 LRRQLDTLGQEKLRLEAEFGNMQGLVEDLKNK 183
>gi|82654947|sp|P19013.4|K2C4_HUMAN RecName: Full=Keratin, type II cytoskeletal 4; AltName:
Full=Cytokeratin-4; Short=CK-4; AltName: Full=Keratin-4;
Short=K4; AltName: Full=Type-II keratin Kb4
gi|16209201|gb|AAL14196.1| keratin 4 [Homo sapiens]
gi|27769210|gb|AAH42174.1| KRT4 protein [Homo sapiens]
gi|190690303|gb|ACE86926.1| keratin 4 protein [synthetic construct]
gi|190691677|gb|ACE87613.1| keratin 4 protein [synthetic construct]
Length = 534
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKASLE--YSLYSIEESHTTEFKKVKAASEKEI 113
R +E+ ++K LN++ A +I+ VQ L+ LE ++L +++ TT K ++ E +
Sbjct: 148 RTEEREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQ-QQTTTTSSKNLEPLFETYL 206
Query: 114 EDIRKALDRESSSKSALAIEKRRLLDELLDLKNK 147
+RK LD + K L E + + D + D K K
Sbjct: 207 SVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTK 240
>gi|348556468|ref|XP_003464043.1| PREDICTED: desmin-like [Cavia porcellus]
Length = 472
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKASL 87
+ +R EK EL+ LNDR A YIE V+ L+ A+L
Sbjct: 104 LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAAL 138
>gi|348510135|ref|XP_003442601.1| PREDICTED: keratin, type I cytoskeletal 13-like [Oreochromis
niloticus]
Length = 429
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKASLE 88
EK ++NLNDRLA Y+E V+KL+ A LE
Sbjct: 78 EKFTMQNLNDRLASYLEKVRKLEKANAELE 107
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.303 0.121 0.314
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,190,489,221
Number of Sequences: 23463169
Number of extensions: 90246269
Number of successful extensions: 902400
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 4439
Number of HSP's that attempted gapping in prelim test: 891310
Number of HSP's gapped (non-prelim): 14875
length of query: 147
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 37
effective length of database: 9,778,246,777
effective search space: 361795130749
effective search space used: 361795130749
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 71 (32.0 bits)