Your job contains 1 sequence.
>psy20
MSGRSKRGATPAKTPSASRGSSSRQTSEVREEPPQPQPQSQPPRPGSPLSPTIISRRQEK
NELKNLNDRLAQYIELVQKLQNDKASLEYSLYSIEESHTTEFKKVKAASEKEIEDIRKAL
DRESSSKSALAIEKRRLLDELLDLKNK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy20
(147 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P13648 - symbol:LMNA "Lamin-A" species:9031 "Ga... 127 2.3e-08 2
ZFIN|ZDB-GENE-020424-3 - symbol:lmna "lamin A" species:79... 135 5.2e-08 1
ZFIN|ZDB-GENE-020424-4 - symbol:lmnl3 "lamin L3" species:... 133 7.2e-08 1
FB|FBgn0010397 - symbol:LamC "Lamin C" species:7227 "Dros... 133 7.8e-08 1
UNIPROTKB|E9PBF6 - symbol:LMNB1 "Lamin-B1" species:9606 "... 127 1.6e-07 1
UNIPROTKB|Q6UYC3 - symbol:LMNA "Progerin" species:9606 "H... 129 2.1e-07 1
UNIPROTKB|F1MYG5 - symbol:LMNA "Uncharacterized protein" ... 129 2.3e-07 1
UNIPROTKB|P02545 - symbol:LMNA "Prelamin-A/C" species:960... 129 2.3e-07 1
UNIPROTKB|F1PBJ3 - symbol:LMNA "Uncharacterized protein" ... 129 2.3e-07 1
MGI|MGI:96794 - symbol:Lmna "lamin A" species:10090 "Mus ... 129 2.3e-07 1
RGD|620456 - symbol:Lmna "lamin A/C" species:10116 "Rattu... 129 2.3e-07 1
UNIPROTKB|G3V8L3 - symbol:Lmna "Lamin A, isoform CRA_b" s... 129 2.3e-07 1
UNIPROTKB|J9NSW5 - symbol:LMNA "Uncharacterized protein" ... 129 2.8e-07 1
UNIPROTKB|E1B8N6 - symbol:LMNB1 "Uncharacterized protein"... 127 3.2e-07 1
UNIPROTKB|P20700 - symbol:LMNB1 "Lamin-B1" species:9606 "... 127 3.2e-07 1
UNIPROTKB|F1RKM0 - symbol:LMNB1 "Uncharacterized protein"... 127 3.2e-07 1
RGD|620522 - symbol:Lmnb1 "lamin B1" species:10116 "Rattu... 127 3.2e-07 1
UNIPROTKB|P70615 - symbol:Lmnb1 "Lamin-B1" species:10116 ... 127 3.2e-07 1
MGI|MGI:96795 - symbol:Lmnb1 "lamin B1" species:10090 "Mu... 127 3.2e-07 1
UNIPROTKB|Q03252 - symbol:LMNB2 "Lamin-B2" species:9606 "... 127 3.3e-07 1
UNIPROTKB|J9JID7 - symbol:LMNB2 "Lamin B2, isoform CRA_a"... 127 3.4e-07 1
RGD|1563803 - symbol:Lmnb2 "lamin B2" species:10116 "Ratt... 126 4.2e-07 1
UNIPROTKB|F1RLQ2 - symbol:LMNA "Prelamin-A/C" species:982... 126 4.9e-07 1
UNIPROTKB|Q3ZD69 - symbol:LMNA "Prelamin-A/C" species:982... 126 4.9e-07 1
ZFIN|ZDB-GENE-020424-2 - symbol:lmnb1 "lamin B1" species:... 125 5.4e-07 1
MGI|MGI:96796 - symbol:Lmnb2 "lamin B2" species:10090 "Mu... 123 8.8e-07 1
UNIPROTKB|F1MJI7 - symbol:LMNB2 "Uncharacterized protein"... 123 9.1e-07 1
UNIPROTKB|I3LC25 - symbol:LMNB2 "Uncharacterized protein"... 123 9.5e-07 1
UNIPROTKB|F1N8X2 - symbol:LOC415464 "Uncharacterized prot... 122 1.1e-06 1
UNIPROTKB|F1NP51 - symbol:LMNB2 "Lamin-B2" species:9031 "... 122 1.1e-06 1
UNIPROTKB|P14732 - symbol:LMNB2 "Lamin-B2" species:9031 "... 122 1.1e-06 1
UNIPROTKB|F1NVW0 - symbol:LMNB2 "Lamin-B2" species:9031 "... 122 1.2e-06 1
UNIPROTKB|P14731 - symbol:LMNB1 "Lamin-B1" species:9031 "... 121 1.4e-06 1
UNIPROTKB|F1NAM2 - symbol:LMNB1 "Lamin-B1" species:9031 "... 120 1.8e-06 1
UNIPROTKB|F1NR20 - symbol:LMNB1 "Lamin-B1" species:9031 "... 120 1.8e-06 1
ZFIN|ZDB-GENE-990630-13 - symbol:lmnb2 "lamin B2" species... 119 2.3e-06 1
FB|FBgn0002525 - symbol:Lam "Lamin" species:7227 "Drosoph... 105 8.4e-06 2
UNIPROTKB|E2QSV7 - symbol:NEFL "Uncharacterized protein" ... 107 3.3e-05 1
RGD|621458 - symbol:Nefl "neurofilament, light polypeptid... 107 4.0e-05 1
UNIPROTKB|P07196 - symbol:NEFL "Neurofilament light polyp... 107 4.0e-05 1
MGI|MGI:97313 - symbol:Nefl "neurofilament, light polypep... 107 4.0e-05 1
UNIPROTKB|F6UNV5 - symbol:LOC100856220 "Uncharacterized p... 107 4.0e-05 1
UNIPROTKB|P02547 - symbol:NEFL "Neurofilament light polyp... 107 4.1e-05 1
UNIPROTKB|F1RJU4 - symbol:NEFL "Neurofilament light polyp... 107 4.1e-05 1
UNIPROTKB|P02548 - symbol:NEFL "Neurofilament light polyp... 107 4.1e-05 1
UNIPROTKB|F1NNY7 - symbol:NEFL "Uncharacterized protein" ... 101 9.3e-05 1
UNIPROTKB|E1C5R3 - symbol:NEFL "Uncharacterized protein" ... 101 0.00018 1
UNIPROTKB|Q02916 - symbol:NEFL "Neurofilament light polyp... 101 0.00018 1
UNIPROTKB|Q16352 - symbol:INA "Alpha-internexin" species:... 100 0.00020 1
UNIPROTKB|Q29218 - symbol:KRT20 "Keratin, type I cytoskel... 89 0.00027 1
ZFIN|ZDB-GENE-050506-95 - symbol:si:dkeyp-113d7.4 "si:dke... 71 0.00031 2
UNIPROTKB|F1MJ66 - symbol:KRT12 "Uncharacterized protein"... 70 0.00035 2
UNIPROTKB|Q08DH7 - symbol:INA "Alpha-internexin" species:... 97 0.00043 1
UNIPROTKB|E2RE99 - symbol:INA "Uncharacterized protein" s... 97 0.00043 1
ZFIN|ZDB-GENE-060503-86 - symbol:krt17 "keratin 17" speci... 74 0.00054 2
ZFIN|ZDB-GENE-991110-22 - symbol:cki "type I cytokeratin"... 69 0.00057 2
UNIPROTKB|F8W835 - symbol:PRPH "Peripherin" species:9606 ... 63 0.00060 2
UNIPROTKB|E1BRI6 - symbol:NEFM "Neurofilament medium poly... 98 0.00063 1
UNIPROTKB|F1NUT7 - symbol:NEFM "Neurofilament medium poly... 98 0.00066 1
UNIPROTKB|P16053 - symbol:NEFM "Neurofilament medium poly... 98 0.00066 1
UNIPROTKB|F1RXG3 - symbol:KRT12 "Uncharacterized protein"... 70 0.00085 2
ZFIN|ZDB-GENE-040718-88 - symbol:zgc:92035 "zgc:92035" sp... 69 0.00091 2
>UNIPROTKB|P13648 [details] [associations]
symbol:LMNA "Lamin-A" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001664 GO:GO:0005634
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 EMBL:X16879 IPI:IPI00587219
PIR:S05517 RefSeq:NP_990618.1 UniGene:Gga.715
ProteinModelPortal:P13648 SMR:P13648 IntAct:P13648 PRIDE:P13648
GeneID:396224 KEGG:gga:396224 CTD:4000 KO:K12641 NextBio:20816276
Uniprot:P13648
Length = 657
Score = 127 (49.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 23 TRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYEA 82
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 83 ELADARKTLDSVAKERARLQL 103
Score = 34 (17.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 4 RSKRGATPAKTP 15
RS RG P+ TP
Sbjct: 8 RSGRGGGPSGTP 19
>ZFIN|ZDB-GENE-020424-3 [details] [associations]
symbol:lmna "lamin A" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0060047 "heart contraction" evidence=IMP] [GO:0090342
"regulation of cell aging" evidence=IMP] [GO:0005882 "intermediate
filament" evidence=IEA] InterPro:IPR001664 ZFIN:ZDB-GENE-020424-3
GO:GO:0090342 GO:GO:0005198 GO:GO:0005882 GO:GO:0060047
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 HSSP:P02545 CTD:4000 KO:K12641 EMBL:AF397016
IPI:IPI00506427 RefSeq:NP_694503.1 UniGene:Dr.10311
ProteinModelPortal:Q90XD7 SMR:Q90XD7 STRING:Q90XD7 PRIDE:Q90XD7
GeneID:195815 KEGG:dre:195815 InParanoid:Q90XD7 NextBio:20797178
ArrayExpress:Q90XD7 Bgee:Q90XD7 Uniprot:Q90XD7
Length = 659
Score = 135 (52.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK +L NLNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 21 TRISRLQEKEDLSNLNDRLAVYIDKVRSLEVENAGLRMRITESETEISRELSGMKAAYEA 80
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 81 ELADARKTLDSVAKERARLQL 101
>ZFIN|ZDB-GENE-020424-4 [details] [associations]
symbol:lmnl3 "lamin L3" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-020424-4 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 HSSP:P08670 EMBL:AF397015
IPI:IPI00499884 UniGene:Dr.80387 ProteinModelPortal:Q90XD8
SMR:Q90XD8 STRING:Q90XD8 InParanoid:Q90XD8 ArrayExpress:Q90XD8
Uniprot:Q90XD8
Length = 584
Score = 133 (51.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ++R QEK +L+ LNDRLA YIE V++L+ DK+ E V+ E
Sbjct: 33 TRLTRLQEKEDLRQLNDRLANYIERVRQLEADKSSMQILLEEKEESSLREVGNVRRLYES 92
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK+LD ++ ++ L I
Sbjct: 93 ELADARKSLDATANERARLQI 113
>FB|FBgn0010397 [details] [associations]
symbol:LamC "Lamin C" species:7227 "Drosophila melanogaster"
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005638 "lamin
filament" evidence=ISS;NAS;IDA] [GO:0007084 "mitotic nuclear
envelope reassembly" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0031081 "nuclear pore distribution" evidence=IMP] [GO:0030833
"regulation of actin filament polymerization" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IMP] [GO:0035989 "tendon development" evidence=IMP]
InterPro:IPR001664 EMBL:AE013599 GO:GO:0005198 GO:GO:0006342
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0030833 InterPro:IPR001322 Pfam:PF00932 GO:GO:0031081
GO:GO:0005638 eggNOG:NOG325506 GeneTree:ENSGT00560000076873
KO:K07611 OrthoDB:EOG4J3TZD EMBL:L07933 EMBL:X75886 EMBL:AY095046
PIR:S49020 RefSeq:NP_523742.2 UniGene:Dm.2782
ProteinModelPortal:Q03427 SMR:Q03427 MINT:MINT-1329471
STRING:Q03427 PaxDb:Q03427 EnsemblMetazoa:FBtr0087512 GeneID:36615
KEGG:dme:Dmel_CG10119 CTD:36615 FlyBase:FBgn0010397
InParanoid:Q03427 OMA:LWEENDD PhylomeDB:Q03427 GenomeRNAi:36615
NextBio:799505 Bgee:Q03427 GermOnline:CG10119 GO:GO:0070732
GO:GO:0060415 Uniprot:Q03427
Length = 621
Score = 133 (51.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T SR+QEK EL++LNDRLA YI+ ++ L+N+ + E +KA EK
Sbjct: 39 TRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEK 98
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ RK LD + K+ L I
Sbjct: 99 ELAAARKLLDETAKEKAKLEI 119
>UNIPROTKB|E9PBF6 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0005638
HGNC:HGNC:6637 ChiTaRS:LMNB1 EMBL:AC137794 IPI:IPI00790831
ProteinModelPortal:E9PBF6 SMR:E9PBF6 PRIDE:E9PBF6
Ensembl:ENST00000395354 ArrayExpress:E9PBF6 Bgee:E9PBF6
Uniprot:E9PBF6
Length = 387
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>UNIPROTKB|Q6UYC3 [details] [associations]
symbol:LMNA "Progerin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001664 GO:GO:0005634 GO:GO:0005737 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AL355388 InterPro:IPR001322 Pfam:PF00932 EMBL:AL135927
EMBL:AL356734 UniGene:Hs.594444 HGNC:HGNC:6636 ChiTaRS:LMNA
HOGENOM:HOG000007711 EMBL:AY357727 IPI:IPI00644087 SMR:Q6UYC3
DIP:DIP-58162N MINT:MINT-1408464 STRING:Q6UYC3
Ensembl:ENST00000368299 UCSC:uc009wro.1 Uniprot:Q6UYC3
Length = 614
Score = 129 (50.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|F1MYG5 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090343 "positive regulation of cell aging"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0035105 "sterol regulatory element
binding protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 OMA:HCSGSGD GO:GO:0090343
GO:GO:0035105 EMBL:DAAA02007143 EMBL:DAAA02007144 IPI:IPI00689750
Ensembl:ENSBTAT00000023373 ArrayExpress:F1MYG5 Uniprot:F1MYG5
Length = 664
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|P02545 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA;TAS]
[GO:0005638 "lamin filament" evidence=IEA;TAS] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0035105 "sterol regulatory
element binding protein import into nucleus" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IDA;TAS]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] [GO:0005882
"intermediate filament" evidence=TAS] [GO:0005652 "nuclear lamina"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0090343 "positive regulation of cell aging" evidence=IDA]
[GO:0071456 "cellular response to hypoxia" evidence=IEP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006921 "cellular component disassembly involved in execution
phase of apoptosis" evidence=TAS] [GO:0006987 "activation of
signaling protein activity involved in unfolded protein response"
evidence=TAS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=TAS] [GO:0030951 "establishment or maintenance
of microtubule cytoskeleton polarity" evidence=ISS] [GO:0042981
"regulation of apoptotic process" evidence=ISS] [GO:0030334
"regulation of cell migration" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_578 InterPro:IPR001664
GO:GO:0005737 GO:GO:0005635 GO:GO:0048471 Reactome:REACT_116125
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006987 GO:GO:0042981
GO:GO:0005198 Pathway_Interaction_DB:caspase_pathway GO:GO:0071456
GO:GO:0007283 GO:GO:0030334 GO:GO:0006998 Reactome:REACT_111183
GO:GO:0007517 Orphanet:54260 GO:GO:0006921 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0030951
EMBL:CH471121 EMBL:AL355388 GO:GO:0055015 GO:GO:0034504
Pathway_Interaction_DB:faspathway InterPro:IPR001322 Pfam:PF00932
Orphanet:293899 Orphanet:293888 Orphanet:293910 MIM:275210
Orphanet:740 Orphanet:1662 GO:GO:0005638 eggNOG:NOG325506 CTD:4000
KO:K12641 EMBL:X03444 EMBL:X03445 EMBL:M13451 EMBL:M13452
EMBL:AK295390 EMBL:AL135927 EMBL:AL356734 EMBL:BC000511
EMBL:BC003162 EMBL:BC014507 EMBL:AF381029 IPI:IPI00021405
IPI:IPI00216952 IPI:IPI00216953 IPI:IPI00910241 PIR:A02961
PIR:A02962 RefSeq:NP_005563.1 RefSeq:NP_733821.1 RefSeq:NP_733822.1
UniGene:Hs.594444 PDB:1IFR PDB:1IVT PDB:1X8Y PDB:2XV5 PDB:3GEF
PDB:3V4Q PDB:3V4W PDB:3V5B PDBsum:1IFR PDBsum:1IVT PDBsum:1X8Y
PDBsum:2XV5 PDBsum:3GEF PDBsum:3V4Q PDBsum:3V4W PDBsum:3V5B
ProteinModelPortal:P02545 SMR:P02545 DIP:DIP-32948N IntAct:P02545
MINT:MINT-5003995 STRING:P02545 PhosphoSite:P02545 DMDM:125962
REPRODUCTION-2DPAGE:IPI00021405 REPRODUCTION-2DPAGE:IPI00216952
REPRODUCTION-2DPAGE:P02545 SWISS-2DPAGE:P02545 PaxDb:P02545
PeptideAtlas:P02545 PRIDE:P02545 DNASU:4000 Ensembl:ENST00000347559
Ensembl:ENST00000361308 Ensembl:ENST00000368300
Ensembl:ENST00000368301 Ensembl:ENST00000448611
Ensembl:ENST00000508500 GeneID:4000 KEGG:hsa:4000 UCSC:uc001fnf.1
UCSC:uc001fnh.2 UCSC:uc001fni.2 GeneCards:GC01P156053
HGNC:HGNC:6636 HPA:CAB004022 HPA:HPA006660 MIM:115200 MIM:150330
MIM:151660 MIM:159001 MIM:176670 MIM:181350 MIM:212112 MIM:248370
MIM:605588 MIM:610140 MIM:613205 neXtProt:NX_P02545 Orphanet:79474
Orphanet:280365 Orphanet:98853 Orphanet:264 Orphanet:98855
Orphanet:98856 Orphanet:157973 Orphanet:2229 Orphanet:300751
Orphanet:2348 Orphanet:79084 Orphanet:168796 Orphanet:137871
Orphanet:90153 Orphanet:99706 PharmGKB:PA231 InParanoid:P02545
OMA:HCSGSGD OrthoDB:EOG4S4PG2 PhylomeDB:P02545 ChEMBL:CHEMBL1293235
ChiTaRS:LMNA EvolutionaryTrace:P02545 GenomeRNAi:4000 NextBio:15692
PMAP-CutDB:P02545 ArrayExpress:P02545 Bgee:P02545 CleanEx:HS_LMNA
Genevestigator:P02545 GermOnline:ENSG00000160789 GO:GO:0090343
GO:GO:0035105 Uniprot:P02545
Length = 664
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|F1PBJ3 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090343 "positive regulation of cell aging"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0035105 "sterol regulatory element
binding protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 CTD:4000 KO:K12641 GO:GO:0090343
GO:GO:0035105 EMBL:AAEX03005326 RefSeq:XP_864434.1
ProteinModelPortal:F1PBJ3 Ensembl:ENSCAFT00000026695 GeneID:480124
KEGG:cfa:480124 NextBio:20855195 Uniprot:F1PBJ3
Length = 665
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>MGI|MGI:96794 [details] [associations]
symbol:Lmna "lamin A" species:10090 "Mus musculus" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005635 "nuclear envelope" evidence=ISO;IDA] [GO:0005638 "lamin
filament" evidence=IDA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0006998 "nuclear envelope organization" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=ISO] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0030010 "establishment of cell
polarity" evidence=NAS] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0030951 "establishment or maintenance of
microtubule cytoskeleton polarity" evidence=IMP] [GO:0034504
"protein localization to nucleus" evidence=IMP] [GO:0035105 "sterol
regulatory element binding protein import into nucleus"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IMP] [GO:0090343 "positive regulation of cell
aging" evidence=ISO] InterPro:IPR001664 MGI:MGI:96794 GO:GO:0005634
GO:GO:0005635 GO:GO:0048471 GO:GO:0042981 GO:GO:0005198
GO:GO:0071456 GO:GO:0007283 GO:GO:0030334 GO:GO:0006998
Reactome:REACT_118161 Reactome:REACT_120463 Reactome:REACT_75800
GO:GO:0007517 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0030951 GO:GO:0030010 GO:GO:0055015
InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 CTD:4000 KO:K12641 OMA:HCSGSGD
OrthoDB:EOG4S4PG2 GO:GO:0090343 GO:GO:0035105 EMBL:D49733
EMBL:X14170 EMBL:D14850 EMBL:AK004619 EMBL:AK147150 EMBL:AK149998
EMBL:AK150501 EMBL:AK150624 EMBL:AK152539 EMBL:AK161221
EMBL:AK167858 EMBL:BC015302 EMBL:BC094020 EMBL:D13181
IPI:IPI00230435 IPI:IPI00400300 IPI:IPI00620256 PIR:I53414
PIR:S04333 PIR:S18324 PIR:S28182 RefSeq:NP_001002011.2
RefSeq:NP_001104572.1 RefSeq:NP_062263.1 UniGene:Mm.243014
UniGene:Mm.471227 PDB:1UFG PDBsum:1UFG ProteinModelPortal:P48678
SMR:P48678 IntAct:P48678 MINT:MINT-1868521 STRING:P48678
PhosphoSite:P48678 REPRODUCTION-2DPAGE:IPI00400300
REPRODUCTION-2DPAGE:IPI00620256 PaxDb:P48678 PRIDE:P48678
Ensembl:ENSMUST00000029699 Ensembl:ENSMUST00000036252
Ensembl:ENSMUST00000120377 GeneID:16905 KEGG:mmu:16905
UCSC:uc008pvk.2 InParanoid:P48678 EvolutionaryTrace:P48678
NextBio:290934 Bgee:P48678 CleanEx:MM_LMNA Genevestigator:P48678
GermOnline:ENSMUSG00000028063 Uniprot:P48678
Length = 665
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>RGD|620456 [details] [associations]
symbol:Lmna "lamin A/C" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005635 "nuclear
envelope" evidence=ISO;ISS] [GO:0005638 "lamin filament"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0006997 "nucleus
organization" evidence=ISO] [GO:0006998 "nuclear envelope
organization" evidence=ISO;TAS] [GO:0007283 "spermatogenesis"
evidence=IEP] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0030334 "regulation
of cell migration" evidence=ISO] [GO:0030951 "establishment or
maintenance of microtubule cytoskeleton polarity" evidence=ISO]
[GO:0034504 "protein localization to nucleus" evidence=ISO;ISS]
[GO:0035105 "sterol regulatory element binding protein import into
nucleus" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0055015 "ventricular cardiac muscle
cell development" evidence=ISO] [GO:0071456 "cellular response to
hypoxia" evidence=ISO] [GO:0090343 "positive regulation of cell
aging" evidence=ISO;ISS] InterPro:IPR001664 RGD:620456
GO:GO:0005635 GO:GO:0048471 GO:GO:0042981 GO:GO:0005198
GO:GO:0071456 GO:GO:0007283 GO:GO:0030334 GO:GO:0006998
GO:GO:0007517 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0030951 GO:GO:0055015 GO:GO:0034504
InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506
CTD:4000 KO:K12641 OrthoDB:EOG4S4PG2 GO:GO:0090343 GO:GO:0035105
HOGENOM:HOG000007711 EMBL:X66870 EMBL:X76297 IPI:IPI00201060
PIR:S27267 RefSeq:NP_001002016.1 UniGene:Rn.44161
ProteinModelPortal:P48679 SMR:P48679 IntAct:P48679 STRING:P48679
PhosphoSite:P48679 PRIDE:P48679 GeneID:60374 KEGG:rno:60374
UCSC:RGD:620456 InParanoid:P48679 NextBio:612051
ArrayExpress:P48679 Genevestigator:P48679
GermOnline:ENSRNOG00000019638 Uniprot:P48679
Length = 665
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|G3V8L3 [details] [associations]
symbol:Lmna "Lamin A, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030951 "establishment or maintenance
of microtubule cytoskeleton polarity" evidence=IEA] [GO:0035105
"sterol regulatory element binding protein import into nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0071456 "cellular response to
hypoxia" evidence=IEA] [GO:0090343 "positive regulation of cell
aging" evidence=IEA] InterPro:IPR001664 RGD:620456 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 EMBL:CH473976 GeneTree:ENSGT00560000076873 OMA:HCSGSGD
UniGene:Rn.44161 ProteinModelPortal:G3V8L3
Ensembl:ENSRNOT00000026705 Uniprot:G3V8L3
Length = 665
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|J9NSW5 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00560000076873
OMA:HCSGSGD EMBL:AAEX03005326 Ensembl:ENSCAFT00000045788
Uniprot:J9NSW5
Length = 759
Score = 129 (50.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +KAA E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|E1B8N6 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043274 "phospholipase binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:QKESRAC
EMBL:DAAA02019796 EMBL:DAAA02019797 EMBL:DAAA02019798
IPI:IPI00701266 Ensembl:ENSBTAT00000052423 Uniprot:E1B8N6
Length = 585
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>UNIPROTKB|P20700 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0043274 "phospholipase binding"
evidence=IEA] [GO:0005637 "nuclear inner membrane" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006921 "cellular component disassembly
involved in execution phase of apoptosis" evidence=TAS]
Reactome:REACT_578 InterPro:IPR001664 GO:GO:0005635
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005198
Pathway_Interaction_DB:caspase_pathway Reactome:REACT_111183
GO:GO:0006921 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 EMBL:CH471086 GO:GO:0005637 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506 KO:K07611
HOGENOM:HOG000007711 CTD:4001 OrthoDB:EOG45MN55 EMBL:M34458
EMBL:L37747 EMBL:L37737 EMBL:L37738 EMBL:L37739 EMBL:L37740
EMBL:L37741 EMBL:L37742 EMBL:L37743 EMBL:L37744 EMBL:L37745
EMBL:L37746 EMBL:AK312603 EMBL:BC012295 EMBL:BC103723
IPI:IPI00217975 PIR:A34707 RefSeq:NP_005564.1 UniGene:Hs.89497
PDB:2KPW PDB:3JT0 PDB:3TYY PDB:3UMN PDBsum:2KPW PDBsum:3JT0
PDBsum:3TYY PDBsum:3UMN ProteinModelPortal:P20700 SMR:P20700
DIP:DIP-34897N IntAct:P20700 MINT:MINT-3009331 STRING:P20700
PhosphoSite:P20700 DMDM:125953 SWISS-2DPAGE:P20700 PaxDb:P20700
PeptideAtlas:P20700 PRIDE:P20700 DNASU:4001 Ensembl:ENST00000261366
GeneID:4001 KEGG:hsa:4001 UCSC:uc003kud.2 GeneCards:GC05P126112
HGNC:HGNC:6637 HPA:CAB005269 MIM:150340 MIM:169500
neXtProt:NX_P20700 Orphanet:99027 PharmGKB:PA30403
InParanoid:P20700 OMA:QKESRAC PhylomeDB:P20700 ChiTaRS:LMNB1
EvolutionaryTrace:P20700 GenomeRNAi:4001 NextBio:15700
PMAP-CutDB:P20700 ArrayExpress:P20700 Bgee:P20700 CleanEx:HS_LMNB1
Genevestigator:P20700 GermOnline:ENSG00000113368 Uniprot:P20700
Length = 586
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>UNIPROTKB|F1RKM0 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043274 "phospholipase binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 KO:K07611
CTD:4001 OMA:QKESRAC EMBL:CU855517 RefSeq:XP_003123930.2
UniGene:Ssc.9125 Ensembl:ENSSSCT00000015568 GeneID:100513342
KEGG:ssc:100513342 Uniprot:F1RKM0
Length = 586
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>RGD|620522 [details] [associations]
symbol:Lmnb1 "lamin B1" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=IEA;ISO] [GO:0005637 "nuclear inner membrane"
evidence=IEA] [GO:0005638 "lamin filament" evidence=IEA;ISO]
[GO:0005654 "nucleoplasm" evidence=IEA;ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0043274 "phospholipase binding" evidence=IEA;ISO]
InterPro:IPR001664 RGD:620522 GO:GO:0005654 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:4001
OrthoDB:EOG45MN55 EMBL:U72353 IPI:IPI00231418 RefSeq:NP_446357.1
UniGene:Rn.11362 ProteinModelPortal:P70615 SMR:P70615 STRING:P70615
PhosphoSite:P70615 World-2DPAGE:0004:P70615 PRIDE:P70615
GeneID:116685 KEGG:rno:116685 UCSC:RGD:620522 InParanoid:P70615
NextBio:619540 Genevestigator:P70615 GermOnline:ENSRNOG00000013774
Uniprot:P70615
Length = 587
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>UNIPROTKB|P70615 [details] [associations]
symbol:Lmnb1 "Lamin-B1" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 RGD:620522 GO:GO:0005654 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:4001
OrthoDB:EOG45MN55 EMBL:U72353 IPI:IPI00231418 RefSeq:NP_446357.1
UniGene:Rn.11362 ProteinModelPortal:P70615 SMR:P70615 STRING:P70615
PhosphoSite:P70615 World-2DPAGE:0004:P70615 PRIDE:P70615
GeneID:116685 KEGG:rno:116685 UCSC:RGD:620522 InParanoid:P70615
NextBio:619540 Genevestigator:P70615 GermOnline:ENSRNOG00000013774
Uniprot:P70615
Length = 587
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 25 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 85 ELADARRALDDTARERAKLQI 105
>MGI|MGI:96795 [details] [associations]
symbol:Lmnb1 "lamin B1" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005638 "lamin filament" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0008432 "JUN kinase binding"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0031662 "positive regulation of
cyclin-dependent protein serine/threonine kinase activity involved
in G2/M" evidence=NAS] [GO:0043274 "phospholipase binding"
evidence=IPI] [GO:0046330 "positive regulation of JNK cascade"
evidence=NAS] InterPro:IPR001664 MGI:MGI:96795 GO:GO:0005635
GO:GO:0005654 GO:GO:0005198 GO:GO:0046330 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0005637
GO:GO:0008432 InterPro:IPR001322 Pfam:PF00932 GO:GO:0031662
GO:GO:0005638 eggNOG:NOG325506 GeneTree:ENSGT00560000076873
KO:K07611 HOGENOM:HOG000007711 CTD:4001 OrthoDB:EOG45MN55
OMA:QKESRAC ChiTaRS:LMNB1 EMBL:X16705 EMBL:M35153 EMBL:D50080
EMBL:BC052729 EMBL:BC058392 IPI:IPI00230394 PIR:S07720
RefSeq:NP_034851.2 UniGene:Mm.4105 ProteinModelPortal:P14733
SMR:P14733 IntAct:P14733 STRING:P14733 PhosphoSite:P14733
REPRODUCTION-2DPAGE:IPI00230394 SWISS-2DPAGE:P14733 PaxDb:P14733
PRIDE:P14733 Ensembl:ENSMUST00000025486 GeneID:16906 KEGG:mmu:16906
UCSC:uc012bdd.1 InParanoid:P14733 NextBio:290940 Bgee:P14733
CleanEx:MM_LMNB1 Genevestigator:P14733
GermOnline:ENSMUSG00000024590 Uniprot:P14733
Length = 588
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + + E +KA E
Sbjct: 26 TRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYET 85
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L I
Sbjct: 86 ELADARRALDDTARERAKLQI 106
>UNIPROTKB|Q03252 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005652 "nuclear lamina"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001664
GO:GO:0005198 Pathway_Interaction_DB:caspase_pathway GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0005637
GO:GO:0005652 InterPro:IPR001322 Pfam:PF00932 EMBL:AC005624
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:84823
OrthoDB:EOG4ZCT4D EMBL:BT007441 EMBL:AC011522 EMBL:BC006551
EMBL:M94362 EMBL:M94363 IPI:IPI00009771 RefSeq:NP_116126.3
UniGene:Hs.538286 PDB:2LLL PDBsum:2LLL ProteinModelPortal:Q03252
SMR:Q03252 DIP:DIP-57724N IntAct:Q03252 STRING:Q03252
PhosphoSite:Q03252 DMDM:23503078 REPRODUCTION-2DPAGE:IPI00009771
PaxDb:Q03252 PRIDE:Q03252 DNASU:84823 Ensembl:ENST00000582871
GeneID:84823 KEGG:hsa:84823 UCSC:uc002lvy.3 GeneCards:GC19M002428
HGNC:HGNC:6638 MIM:150341 MIM:608709 neXtProt:NX_Q03252
Orphanet:79087 PharmGKB:PA30404 InParanoid:Q03252 OMA:HYIDRVR
PhylomeDB:Q03252 ChiTaRS:LMNB2 GenomeRNAi:84823 NextBio:75028
Bgee:Q03252 CleanEx:HS_LMNB2 Genevestigator:Q03252
GermOnline:ENSG00000176619 Uniprot:Q03252
Length = 600
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + T E +KA E
Sbjct: 19 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYES 78
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 79 ELADARRVLDETARERARLQI 99
>UNIPROTKB|J9JID7 [details] [associations]
symbol:LMNB2 "Lamin B2, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 EMBL:CH471139
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
EMBL:AC005624 KO:K07611 CTD:84823 EMBL:AC011522 RefSeq:NP_116126.3
GeneID:84823 KEGG:hsa:84823 HGNC:HGNC:6638 ChiTaRS:LMNB2
Ensembl:ENST00000325327 Uniprot:J9JID7
Length = 620
Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + T E +KA E
Sbjct: 39 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYES 98
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 99 ELADARRVLDETARERARLQI 119
>RGD|1563803 [details] [associations]
symbol:Lmnb2 "lamin B2" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA;ISO] [GO:0005638 "lamin
filament" evidence=IEA;ISO] InterPro:IPR001664 RGD:1563803
GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 InterPro:IPR001322 Pfam:PF00932
GeneTree:ENSGT00560000076873 OrthoDB:EOG4ZCT4D IPI:IPI00366190
PRIDE:D3ZLC1 Ensembl:ENSRNOT00000022336 UCSC:RGD:1563803
NextBio:645539 Uniprot:D3ZLC1
Length = 598
Score = 126 (49.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQ--KLQNDKAXXXXXXXXXXXXHTTEFKKVKAAS 109
T +SR QEK EL+ LNDRLA YI+ V+ +L+NDK T E +K
Sbjct: 17 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDKLLLRISEKEEVT--TREVSGIKTLY 74
Query: 110 EKEIEDIRKALDRESSSKSALAI 132
E E+ D R+ LD + ++ L I
Sbjct: 75 ESELADARRVLDETARERARLQI 97
>UNIPROTKB|F1RLQ2 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9823 "Sus scrofa"
[GO:0090343 "positive regulation of cell aging" evidence=IEA]
[GO:0071456 "cellular response to hypoxia" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0035105 "sterol regulatory element binding
protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 OMA:HCSGSGD GO:GO:0090343
GO:GO:0035105 EMBL:CU302298 Ensembl:ENSSSCT00000007115
ArrayExpress:F1RLQ2 Uniprot:F1RLQ2
Length = 664
Score = 126 (49.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +K+A E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKSAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>UNIPROTKB|Q3ZD69 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9823 "Sus scrofa"
[GO:0034504 "protein localization to nucleus" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0090343 "positive
regulation of cell aging" evidence=ISS] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0034504 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
CTD:4000 KO:K12641 OrthoDB:EOG4S4PG2 GO:GO:0090343 EMBL:AY995338
EMBL:AY995336 EMBL:AY995337 RefSeq:NP_001104727.1 UniGene:Ssc.944
ProteinModelPortal:Q3ZD69 SMR:Q3ZD69 STRING:Q3ZD69 PRIDE:Q3ZD69
GeneID:100126859 KEGG:ssc:100126859 HOGENOM:HOG000007711
Uniprot:Q3ZD69
Length = 664
Score = 126 (49.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T I+R QEK +L+ LNDRLA YI+ V+ L+ + A + E +K+A E
Sbjct: 24 TRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKSAYEA 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L +
Sbjct: 84 ELGDARKTLDSVAKERARLQL 104
>ZFIN|ZDB-GENE-020424-2 [details] [associations]
symbol:lmnb1 "lamin B1" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-020424-2 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GeneTree:ENSGT00560000076873 EMBL:CR396586
IPI:IPI00611213 Ensembl:ENSDART00000124502 ArrayExpress:F1Q5F3
Bgee:F1Q5F3 Uniprot:F1Q5F3
Length = 603
Score = 125 (49.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
ISR QEK EL+ LNDRLA YI+ V+ L+++ + E ++ E E+
Sbjct: 28 ISRLQEKEELQQLNDRLAAYIDTVRSLESENSVLQIQIREREDVRNRELTGLRTLYETEL 87
Query: 114 EDIRKALDRESSSKSALAI 132
D RKALD + ++ L I
Sbjct: 88 ADARKALDDTARERARLQI 106
>MGI|MGI:96796 [details] [associations]
symbol:Lmnb2 "lamin B2" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005638 "lamin filament" evidence=IDA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001664 MGI:MGI:96796
GO:GO:0005635 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 GeneTree:ENSGT00560000076873 KO:K07611
HOGENOM:HOG000007711 CTD:84823 OrthoDB:EOG4ZCT4D ChiTaRS:LMNB2
EMBL:X54098 EMBL:D13455 EMBL:BC042430 EMBL:BC051985 IPI:IPI00113886
IPI:IPI00126191 PIR:B48315 PIR:S28419 RefSeq:NP_034852.2
UniGene:Mm.7362 ProteinModelPortal:P21619 SMR:P21619 STRING:P21619
PhosphoSite:P21619 PaxDb:P21619 PRIDE:P21619
Ensembl:ENSMUST00000057623 Ensembl:ENSMUST00000105332
Ensembl:ENSMUST00000179022 GeneID:16907 KEGG:mmu:16907
UCSC:uc007gfk.1 InParanoid:P21619 NextBio:290944 Bgee:P21619
CleanEx:MM_LMNB2 Genevestigator:P21619
GermOnline:ENSMUSG00000062075 Uniprot:P21619
Length = 596
Score = 123 (48.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 17 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLRISEKEEVTTREVSGIKTLYES 76
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 77 ELADARRVLDETARERARLQI 97
>UNIPROTKB|F1MJI7 [details] [associations]
symbol:LMNB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005638 "lamin filament" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:DAAA02019682 IPI:IPI00713660 Ensembl:ENSBTAT00000018110
Uniprot:F1MJI7
Length = 614
Score = 123 (48.4 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 29 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLQLKISEREEVTTREVSGIKTLYEA 88
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 89 ELADARRVLDETARDRACLQI 109
>UNIPROTKB|I3LC25 [details] [associations]
symbol:LMNB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005638 "lamin filament" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:FP565569 EMBL:FP312673 Ensembl:ENSSSCT00000027018
Uniprot:I3LC25
Length = 630
Score = 123 (48.4 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 45 TRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKTLYES 104
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 105 ELADARRVLDETARDRARLQI 125
>UNIPROTKB|F1N8X2 [details] [associations]
symbol:LOC415464 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471 GO:GO:0042981
GO:GO:0005198 GO:GO:0071456 GO:GO:0030334 GO:GO:0006998
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873
GO:GO:0090343 GO:GO:0035105 EMBL:AADN02041564 IPI:IPI00588634
Ensembl:ENSGALT00000009815 OMA:RRKKKCC Uniprot:F1N8X2
Length = 588
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T +SR QEK EL+ LNDRLA YIE V+ L+ DK+ E ++ E
Sbjct: 28 TRLSRLQEKEELRQLNDRLAAYIERVRALEADKSVLQQRLVDLEAGSGRELGCLRLRYEA 87
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ALD + ++ L +
Sbjct: 88 ELADARRALDDIAIERATLQV 108
>UNIPROTKB|F1NP51 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873
IPI:IPI00601210 EMBL:AADN02063506 EMBL:AADN02063507
Ensembl:ENSGALT00000000640 ArrayExpress:F1NP51 Uniprot:F1NP51
Length = 600
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 18 TRISRLQEKEELRQLNDRLAVYIDRVRALELENDRLLVKISEKEEVTTREVSGIKNLYES 77
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 78 ELADARRVLDETAKERARLQI 98
>UNIPROTKB|P14732 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005637
"nuclear inner membrane" evidence=IEA] InterPro:IPR001664
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
KO:K07611 HOGENOM:HOG000007711 EMBL:X16880 IPI:IPI00601210
PIR:S05519 RefSeq:NP_990616.1 UniGene:Gga.16090
ProteinModelPortal:P14732 SMR:P14732 IntAct:P14732 STRING:P14732
PRIDE:P14732 GeneID:396222 KEGG:gga:396222 CTD:84823
InParanoid:P14732 OrthoDB:EOG4ZCT4D NextBio:20816274 Uniprot:P14732
Length = 600
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 18 TRISRLQEKEELRQLNDRLAVYIDRVRALELENDRLLVKISEKEEVTTREVSGIKNLYES 77
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 78 ELADARRVLDETAKERARLQI 98
>UNIPROTKB|F1NVW0 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:AADN02063506 EMBL:AADN02063507 IPI:IPI00680941
Ensembl:ENSGALT00000035211 ArrayExpress:F1NVW0 Uniprot:F1NVW0
Length = 613
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + T E +K E
Sbjct: 31 TRISRLQEKEELRQLNDRLAVYIDRVRALELENDRLLVKISEKEEVTTREVSGIKNLYES 90
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D R+ LD + ++ L I
Sbjct: 91 ELADARRVLDETAKERARLQI 111
>UNIPROTKB|P14731 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005637
"nuclear inner membrane" evidence=IEA] InterPro:IPR001664
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
KO:K07611 HOGENOM:HOG000007711 EMBL:X16878 IPI:IPI00598693
PIR:S05518 RefSeq:NP_990617.1 UniGene:Gga.1368
ProteinModelPortal:P14731 SMR:P14731 STRING:P14731 PRIDE:P14731
GeneID:396223 KEGG:gga:396223 CTD:4001 InParanoid:P14731
OrthoDB:EOG45MN55 NextBio:20816275 Uniprot:P14731
Length = 584
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + + E +K E
Sbjct: 24 TRISRLQEKEELRQLNDRLAVYIDKVRSLETENSALQRRVSEREQVCGREISGLKELFET 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L I
Sbjct: 84 ELADARKTLDDTARERAKLQI 104
>UNIPROTKB|F1NAM2 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
GO:GO:0005638 GeneTree:ENSGT00560000076873 IPI:IPI00598693
OMA:QKESRAC EMBL:AADN02073810 EMBL:AADN02073808 EMBL:AADN02073809
Ensembl:ENSGALT00000023681 Uniprot:F1NAM2
Length = 584
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + + E +K E
Sbjct: 24 TRISRLQEKEELQQLNDRLAVYIDKVRSLETENSALQRRVSEREQVCGREISGLKELFET 83
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L I
Sbjct: 84 ELADARKTLDDTARERAKLQI 104
>UNIPROTKB|F1NR20 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:QKESRAC
EMBL:AADN02073810 EMBL:AADN02073808 EMBL:AADN02073809
IPI:IPI00821903 Ensembl:ENSGALT00000037740 Uniprot:F1NR20
Length = 585
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 52 TIISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEK 111
T ISR QEK EL+ LNDRLA YI+ V+ L+ + + E +K E
Sbjct: 25 TRISRLQEKEELQQLNDRLAVYIDKVRSLETENSALQRRVSEREQVCGREISGLKELFET 84
Query: 112 EIEDIRKALDRESSSKSALAI 132
E+ D RK LD + ++ L I
Sbjct: 85 ELADARKTLDDTARERAKLQI 105
>ZFIN|ZDB-GENE-990630-13 [details] [associations]
symbol:lmnb2 "lamin B2" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
ZFIN:ZDB-GENE-990630-13 GO:GO:0005635 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 HSSP:P02545 EMBL:AJ005936 IPI:IPI00513243
UniGene:Dr.75473 ProteinModelPortal:Q9W6T5 SMR:Q9W6T5 STRING:Q9W6T5
PRIDE:Q9W6T5 InParanoid:Q9W6T5 NextBio:20806660 ArrayExpress:Q9W6T5
Bgee:Q9W6T5 Uniprot:Q9W6T5
Length = 583
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
ISR QEK EL+ LNDRLA YI+ V+ L+ + T E +K+ E E+
Sbjct: 21 ISRLQEKEELRALNDRLAVYIDRVRALELENDRLQFKVSEKEEVTTREVSGIKSLYEAEL 80
Query: 114 EDIRKALDRESSSKSALAI 132
D R+ LD + ++ L I
Sbjct: 81 ADARRVLDETARERAKLQI 99
>FB|FBgn0002525 [details] [associations]
symbol:Lam "Lamin" species:7227 "Drosophila melanogaster"
[GO:0005638 "lamin filament" evidence=IDA;TAS] [GO:0007084 "mitotic
nuclear envelope reassembly" evidence=IDA] [GO:0007430 "terminal
branching, open tracheal system" evidence=IMP] [GO:0005652 "nuclear
lamina" evidence=IDA] [GO:0031081 "nuclear pore distribution"
evidence=IMP] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0005198 "structural molecule activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007097 "nuclear migration"
evidence=IMP] [GO:0090435 "protein localization to nuclear
envelope" evidence=IMP] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0071763 "nuclear membrane organization"
evidence=IDA] [GO:0035262 "gonad morphogenesis" evidence=IMP]
[GO:0048546 "digestive tract morphogenesis" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0040003
"chitin-based cuticle development" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IDA;IMP] [GO:0051297 "centrosome organization"
evidence=IMP] [GO:0072686 "mitotic spindle" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0046331 "lateral
inhibition" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005813 GO:GO:0005875
EMBL:AE014134 GO:GO:0051297 GO:GO:0005811 GO:GO:0005198
GO:GO:0007417 GO:GO:0046331 GO:GO:0006342 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0040003
GO:GO:0007084 GO:GO:0007097 GO:GO:0072686 GO:GO:0048546
GO:GO:0035262 GO:GO:0007430 InterPro:IPR001322 Pfam:PF00932
GO:GO:0001745 GO:GO:0031081 GO:GO:0005638 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 EMBL:X07278 EMBL:X16275 EMBL:BT001506
PIR:A29965 PIR:A37103 RefSeq:NP_001245892.1 RefSeq:NP_001245893.1
RefSeq:NP_476616.1 UniGene:Dm.312 ProteinModelPortal:P08928
SMR:P08928 DIP:DIP-2663N IntAct:P08928 MINT:MINT-853541
STRING:P08928 PaxDb:P08928 EnsemblMetazoa:FBtr0079100
EnsemblMetazoa:FBtr0307058 EnsemblMetazoa:FBtr0307059 GeneID:33782
KEGG:dme:Dmel_CG6944 CTD:33782 FlyBase:FBgn0002525
InParanoid:P08928 KO:K07611 OMA:LWEENEE OrthoDB:EOG4J3TZD
PhylomeDB:P08928 ChiTaRS:TSC2 GenomeRNAi:33782 NextBio:785227
Bgee:P08928 GermOnline:CG6944 GO:GO:0071763 Uniprot:P08928
Length = 622
Score = 105 (42.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 55 SRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIE 114
SR EK EL+NLNDRLA YI+ V+ L+ + + T E +K E E+
Sbjct: 50 SRVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELL 109
Query: 115 DIRKALDRESSSKSALAI 132
+ R+ LD + ++ I
Sbjct: 110 ETRRLLDDTARDRARAEI 127
Score = 31 (16.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 1 MSGRSKRGATPAKTP 15
MS +S+R T P
Sbjct: 1 MSSKSRRAGTATPQP 15
>UNIPROTKB|E2QSV7 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0040011 "locomotion"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0000226 GO:GO:0005198 GO:GO:0050885 GO:GO:0040011
GO:GO:0043524 GO:GO:0050772 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012 GO:GO:0031133
GO:GO:0045110 Ensembl:ENSCAFT00000014332 Uniprot:E2QSV7
Length = 473
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>RGD|621458 [details] [associations]
symbol:Nefl "neurofilament, light polypeptide" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA;ISO] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISO] [GO:0005882 "intermediate filament"
evidence=ISO] [GO:0005883 "neurofilament" evidence=IEA;ISO]
[GO:0006950 "response to stress" evidence=IEP] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008089 "anterograde axon
cargo transport" evidence=ISO] [GO:0008090 "retrograde axon cargo
transport" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=IEP] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0010243 "response to organic nitrogen"
evidence=IEP] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=ISO;IDA]
[GO:0030426 "growth cone" evidence=IDA] [GO:0031133 "regulation of
axon diameter" evidence=IEA;ISO] [GO:0033693 "neurofilament bundle
assembly" evidence=ISO] [GO:0040011 "locomotion" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043005
"neuron projection" evidence=ISO;IDA] [GO:0043274 "phospholipase
binding" evidence=IPI] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0045109 "intermediate
filament organization" evidence=ISO] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA;ISO] [GO:0048812 "neuron
projection morphogenesis" evidence=ISO] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA;ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0051258 "protein polymerization" evidence=IDA] [GO:0051412
"response to corticosterone stimulus" evidence=IEP] [GO:0060052
"neurofilament cytoskeleton organization" evidence=IEA;ISO]
[GO:0097458 "neuron part" evidence=ISO] [GO:0033596 "TSC1-TSC2
complex" evidence=ISO] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 RGD:621458 GO:GO:0000226 GO:GO:0051412 GO:GO:0005198
GO:GO:0009636 GO:GO:0030424 GO:GO:0043434 GO:GO:0050885
GO:GO:0040011 GO:GO:0043524 GO:GO:0030426 GO:GO:0050772
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0051258 GO:GO:0014012 GO:GO:0031133 GO:GO:0045110 CTD:4747
eggNOG:NOG145720 KO:K04572 OMA:PRVHISS OrthoDB:EOG42Z4QC
EMBL:AF031880 EMBL:M25638 EMBL:X53981 IPI:IPI00231302 PIR:A21762
PIR:I60434 RefSeq:NP_113971.1 UniGene:Rn.18568
ProteinModelPortal:P19527 SMR:P19527 DIP:DIP-1N IntAct:P19527
STRING:P19527 GlycoSuiteDB:P19527 PhosphoSite:P19527
World-2DPAGE:0004:P19527 PRIDE:P19527 Ensembl:ENSRNOT00000018599
GeneID:83613 KEGG:rno:83613 UCSC:RGD:621458 InParanoid:P19527
NextBio:616157 Genevestigator:P19527 GermOnline:ENSRNOG00000013658
Uniprot:P19527
Length = 542
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>UNIPROTKB|P07196 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9606
"Homo sapiens" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0033693 "neurofilament bundle
assembly" evidence=IMP;IDA] [GO:0045109 "intermediate filament
organization" evidence=IMP] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0019896 "axon transport of mitochondrion"
evidence=IMP] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0008090 "retrograde axon cargo transport"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0033596 "TSC1-TSC2 complex" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0005829 EMBL:CH471080 GO:GO:0005200
GO:GO:0007268 GO:GO:0008089 GO:GO:0019896 GO:GO:0008090
HOVERGEN:HBG013015 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:4747 eggNOG:NOG145720 KO:K04572 OrthoDB:EOG42Z4QC GO:GO:0033693
EMBL:X05608 EMBL:AY156690 EMBL:AC107373 EMBL:BC039237 EMBL:S70309
IPI:IPI00237671 PIR:S07144 RefSeq:NP_006149.2 UniGene:Hs.521461
ProteinModelPortal:P07196 SMR:P07196 IntAct:P07196
MINT:MINT-1370620 STRING:P07196 PhosphoSite:P07196 DMDM:62511894
UCD-2DPAGE:P07196 PaxDb:P07196 PRIDE:P07196 DNASU:4747 GeneID:4747
KEGG:hsa:4747 UCSC:uc003xee.3 GeneCards:GC08M024808 HGNC:HGNC:7739
MIM:162280 MIM:607684 MIM:607734 neXtProt:NX_P07196 Orphanet:99939
Orphanet:101085 Orphanet:228374 PharmGKB:PA31542 InParanoid:P07196
ChiTaRS:NEFL GenomeRNAi:4747 NextBio:18298 CleanEx:HS_NEFL
Genevestigator:P07196 GermOnline:ENSG00000104725 Uniprot:P07196
Length = 543
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>MGI|MGI:97313 [details] [associations]
symbol:Nefl "neurofilament, light polypeptide" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005882 "intermediate filament" evidence=IDA] [GO:0005883
"neurofilament" evidence=ISO;IDA] [GO:0008022 "protein C-terminus
binding" evidence=ISO] [GO:0008089 "anterograde axon cargo
transport" evidence=ISO] [GO:0008090 "retrograde axon cargo
transport" evidence=ISO] [GO:0014012 "peripheral nervous system
axon regeneration" evidence=IMP] [GO:0019896 "axon transport of
mitochondrion" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO;IDA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031133 "regulation of
axon diameter" evidence=IMP] [GO:0033693 "neurofilament bundle
assembly" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043005
"neuron projection" evidence=ISO;IDA] [GO:0043274 "phospholipase
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0045109 "intermediate filament
organization" evidence=ISO;IMP] [GO:0045110 "intermediate filament
bundle assembly" evidence=IGI] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0050772 "positive regulation of
axonogenesis" evidence=IMP] [GO:0050885 "neuromuscular process
controlling balance" evidence=IMP] [GO:0051258 "protein
polymerization" evidence=ISO] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IGI;IMP] [GO:0097458 "neuron
part" evidence=IDA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 MGI:MGI:97313 GO:GO:0000226 GO:GO:0051412
GO:GO:0005198 GO:GO:0009636 GO:GO:0043434 GO:GO:0050885
GO:GO:0040011 GO:GO:0043524 GO:GO:0030426 GO:GO:0050772
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0051258 GO:GO:0014012 GO:GO:0031133 GO:GO:0045110 CTD:4747
eggNOG:NOG145720 KO:K04572 OMA:PRVHISS OrthoDB:EOG42Z4QC
ChiTaRS:NEFL EMBL:M20480 EMBL:M13016 EMBL:DQ201635 EMBL:BC029203
EMBL:AH002053 EMBL:X02165 IPI:IPI00554928 PIR:A25227
RefSeq:NP_035040.1 UniGene:Mm.1956 ProteinModelPortal:P08551
SMR:P08551 DIP:DIP-31944N IntAct:P08551 STRING:P08551
PhosphoSite:P08551 UCD-2DPAGE:P08551 PaxDb:P08551 PRIDE:P08551
Ensembl:ENSMUST00000022639 GeneID:18039 KEGG:mmu:18039
UCSC:uc007uln.1 InParanoid:P08551 NextBio:293145 Bgee:P08551
CleanEx:MM_NEFL Genevestigator:P08551 GermOnline:ENSMUSG00000022055
Uniprot:P08551
Length = 543
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>UNIPROTKB|F6UNV5 [details] [associations]
symbol:LOC100856220 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005198 GO:GO:0005882 GeneTree:ENSGT00690000102043
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 KO:K04572 OMA:PRVHISS
Ensembl:ENSCAFT00000014332 EMBL:AAEX03014354 RefSeq:XP_003639928.1
GeneID:100856220 KEGG:cfa:100856220 Uniprot:F6UNV5
Length = 544
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>UNIPROTKB|P02547 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9823
"Sus scrofa" [GO:0005883 "neurofilament" evidence=ISS] [GO:0008090
"retrograde axon cargo transport" evidence=ISS] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0045109
"intermediate filament organization" evidence=ISS] [GO:0042802
"identical protein binding" evidence=ISS] [GO:0033596 "TSC1-TSC2
complex" evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0019896
"axon transport of mitochondrion" evidence=ISS] [GO:0008022
"protein C-terminus binding" evidence=ISS] [GO:0005200 "structural
constituent of cytoskeleton" evidence=ISS] [GO:0033693
"neurofilament bundle assembly" evidence=ISS] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005200 GO:GO:0042802
GO:GO:0008089 GO:GO:0019896 GO:GO:0008090 GO:GO:0008022
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG145720 OrthoDB:EOG42Z4QC
GO:GO:0033693 PIR:A91337 DisProt:DP00151 ProteinModelPortal:P02547
SMR:P02547 STRING:P02547 Uniprot:P02547
Length = 549
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 86 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAQLLVLRQKHS-EPSRFRALYEQEIRD 144
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 145 LRLAAEDATNEKQAL 159
>UNIPROTKB|F1RJU4 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9823
"Sus scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0050772 "positive regulation of
axonogenesis" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0040011 "locomotion"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0000226 GO:GO:0005198 GO:GO:0050885 GO:GO:0040011
GO:GO:0043524 GO:GO:0050772 GeneTree:ENSGT00690000102043
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012
GO:GO:0031133 GO:GO:0045110 CTD:4747 KO:K04572 OMA:PRVHISS
EMBL:CT978650 RefSeq:NP_001231260.1 UniGene:Ssc.10769
UniGene:Ssc.20298 Ensembl:ENSSSCT00000010578 GeneID:100521224
KEGG:ssc:100521224 Uniprot:F1RJU4
Length = 552
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>UNIPROTKB|P02548 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9913
"Bos taurus" [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0031133 "regulation of axon diameter"
evidence=ISS] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=ISS] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] [GO:0045110 "intermediate filament
bundle assembly" evidence=ISS] [GO:0045109 "intermediate filament
organization" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=ISS] [GO:0005883 "neurofilament"
evidence=ISS] [GO:0005882 "intermediate filament" evidence=ISS]
[GO:0000226 "microtubule cytoskeleton organization" evidence=ISS]
[GO:0030424 "axon" evidence=ISS] [GO:0008089 "anterograde axon
cargo transport" evidence=ISS] [GO:0008022 "protein C-terminus
binding" evidence=ISS] [GO:0008090 "retrograde axon cargo
transport" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=ISS] [GO:0033596 "TSC1-TSC2 complex" evidence=ISS]
[GO:0019896 "axon transport of mitochondrion" evidence=ISS]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0033693 "neurofilament bundle assembly" evidence=ISS]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0000226
GO:GO:0005200 GO:GO:0050885 GO:GO:0040011 GO:GO:0043524
GO:GO:0042802 GO:GO:0050772 GO:GO:0008089 GO:GO:0019896
GO:GO:0008090 GO:GO:0008022 GeneTree:ENSGT00690000102043
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012 GO:GO:0031133
EMBL:U83919 EMBL:BC118240 IPI:IPI00717196 PIR:JW0094
RefSeq:NP_776546.1 UniGene:Bt.89013 ProteinModelPortal:P02548
SMR:P02548 IntAct:P02548 STRING:P02548 PRIDE:P02548
Ensembl:ENSBTAT00000029264 GeneID:281348 KEGG:bta:281348 CTD:4747
eggNOG:NOG145720 InParanoid:P02548 KO:K04572 OMA:PRVHISS
OrthoDB:EOG42Z4QC NextBio:20805356 GO:GO:0033693 Uniprot:P02548
Length = 555
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QEK +L++LNDR A +IE V +L+ H+ E + +A E+EI D
Sbjct: 87 RTQEKAQLQDLNDRFASFIERVHELEQQNKVLEAELLVLRQKHS-EPSRFRALYEQEIRD 145
Query: 116 IRKALDRESSSKSAL 130
+R A + ++ K AL
Sbjct: 146 LRLAAEDATNEKQAL 160
>UNIPROTKB|F1NNY7 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0014012 "peripheral
nervous system axon regeneration" evidence=IEA] [GO:0031133
"regulation of axon diameter" evidence=IEA] [GO:0040011
"locomotion" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 GO:GO:0000226
GO:GO:0005198 GO:GO:0040011 GO:GO:0043524
GeneTree:ENSGT00690000102043 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045110 EMBL:AADN02055473
IPI:IPI00820607 Ensembl:ENSGALT00000041011 ArrayExpress:F1NNY7
Uniprot:F1NNY7
Length = 348
Score = 101 (40.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ H E + +A E+EI +
Sbjct: 25 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKHA-EPSRFRALYEQEIRE 83
Query: 116 IRKALDRESSSKSAL 130
+R A + +S K AL
Sbjct: 84 LRLAAEEATSEKQAL 98
>UNIPROTKB|E1C5R3 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0014012 "peripheral
nervous system axon regeneration" evidence=IEA] [GO:0031133
"regulation of axon diameter" evidence=IEA] [GO:0040011
"locomotion" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0000226 GO:GO:0005198
GO:GO:0040011 GO:GO:0043524 GeneTree:ENSGT00690000102043
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045110
CTD:4747 KO:K04572 OMA:PRVHISS EMBL:AADN02055473 IPI:IPI00575532
RefSeq:XP_417679.1 UniGene:Gga.35414 IntAct:E1C5R3
Ensembl:ENSGALT00000000420 GeneID:419528 KEGG:gga:419528
NextBio:20822571 ArrayExpress:E1C5R3 Uniprot:E1C5R3
Length = 556
Score = 101 (40.6 bits), Expect = 0.00018, P = 0.00018
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKHA-EPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSAL 130
+R A + +S K AL
Sbjct: 147 LRLAAEEATSEKQAL 161
>UNIPROTKB|Q02916 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:93934
"Coturnix japonica" [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISS] [GO:0005883 "neurofilament"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0008090 "retrograde axon cargo transport"
evidence=ISS] [GO:0019896 "axon transport of mitochondrion"
evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0033693
"neurofilament bundle assembly" evidence=ISS] [GO:0042802
"identical protein binding" evidence=ISS] [GO:0045109 "intermediate
filament organization" evidence=ISS] [GO:0033596 "TSC1-TSC2
complex" evidence=ISS] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0005200
GO:GO:0042802 GO:GO:0008089 GO:GO:0019896 GO:GO:0008090
GO:GO:0008022 HOVERGEN:HBG013015 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0033693 EMBL:D13223 EMBL:D13222 PIR:A46024
ProteinModelPortal:Q02916 SMR:Q02916 Uniprot:Q02916
Length = 556
Score = 101 (40.6 bits), Expect = 0.00018, P = 0.00018
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 56 RRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIED 115
R QE+ +L++LNDR A +IE V +L+ H E + +A E+EI +
Sbjct: 88 RSQERAQLQDLNDRFACFIERVHELEQQNKVLEAELLVLRQKHA-EPSRFRALYEQEIRE 146
Query: 116 IRKALDRESSSKSAL 130
+R A + +S K AL
Sbjct: 147 LRLAAEEATSEKQAL 161
>UNIPROTKB|Q16352 [details] [associations]
symbol:INA "Alpha-internexin" species:9606 "Homo sapiens"
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0007399 GO:GO:0030154 GO:GO:0005200 EMBL:CH471066
GO:GO:0042246 CTD:9118 eggNOG:NOG149366 HOGENOM:HOG000230977
HOVERGEN:HBG013015 KO:K07608 OMA:ASSYRKV OrthoDB:EOG4R5031
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 EMBL:S78296
EMBL:AL591408 EMBL:BC006359 IPI:IPI00001453 PIR:I52658
RefSeq:NP_116116.1 UniGene:Hs.500916 ProteinModelPortal:Q16352
SMR:Q16352 IntAct:Q16352 STRING:Q16352 PhosphoSite:Q16352
DMDM:20141266 PaxDb:Q16352 PeptideAtlas:Q16352 PRIDE:Q16352
DNASU:9118 Ensembl:ENST00000369849 GeneID:9118 KEGG:hsa:9118
UCSC:uc001kws.3 GeneCards:GC10P105026 HGNC:HGNC:6057 HPA:CAB002059
HPA:HPA008057 MIM:605338 neXtProt:NX_Q16352 PharmGKB:PA29867
InParanoid:Q16352 PhylomeDB:Q16352 ChiTaRS:INA GenomeRNAi:9118
NextBio:34171 ArrayExpress:Q16352 Bgee:Q16352 CleanEx:HS_INA
Genevestigator:Q16352 GermOnline:ENSG00000148798 Uniprot:Q16352
Length = 499
Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRHA-EPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKS 128
D+R L+ SS++S
Sbjct: 148 RDLRAQLEEASSARS 162
>UNIPROTKB|Q29218 [details] [associations]
symbol:KRT20 "Keratin, type I cytoskeletal 20" species:9823
"Sus scrofa" [GO:0050708 "regulation of protein secretion"
evidence=ISS] [GO:0045109 "intermediate filament organization"
evidence=ISS] [GO:0033554 "cellular response to stress"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664 GO:GO:0005794
GO:GO:0033554 GO:GO:0005198 GO:GO:0005882 GO:GO:0045109
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0050708 HOGENOM:HOG000230975 HSSP:P08670 eggNOG:NOG149615
OrthoDB:EOG4NKBVQ EMBL:F14805 ProteinModelPortal:Q29218
STRING:Q29218 HOVERGEN:HBG104174 Uniprot:Q29218
Length = 107
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEIEDIRK 118
EK +KNLNDRLA Y+E V+ L+ + +T + +A ++I+D+R
Sbjct: 8 EKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRN 67
Query: 119 ALDRESSSKSALAI 132
+ R++ ++A +
Sbjct: 68 QI-RDAQLQNARCV 80
>ZFIN|ZDB-GENE-050506-95 [details] [associations]
symbol:si:dkeyp-113d7.4 "si:dkeyp-113d7.4"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-050506-95 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 EMBL:BC092980 EMBL:BC152252 IPI:IPI00886613
UniGene:Dr.76499 STRING:Q567X5 InParanoid:Q567X5 Uniprot:Q567X5
Length = 488
Score = 71 (30.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKA 85
EK L+NLNDRLA Y+E V+ L+ A
Sbjct: 129 EKFTLQNLNDRLASYLEKVRSLEKANA 155
Score = 48 (22.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 105 VKAASEKEIEDIRKALDRESSSKSALA 131
+K E EI + R+ LD E+S A++
Sbjct: 420 IKTRLEMEIAEYRRLLDAEASGSLAIS 446
>UNIPROTKB|F1MJ66 [details] [associations]
symbol:KRT12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060429 "epithelium development" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0061303 GO:GO:0060429
OMA:QNDYSKY GeneTree:ENSGT00560000077101 EMBL:DAAA02049147
IPI:IPI00702075 Ensembl:ENSBTAT00000020622 Uniprot:F1MJ66
Length = 467
Score = 70 (29.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQ 81
EK +KNLNDRLA Y++ V+ L+
Sbjct: 95 EKETMKNLNDRLASYLDKVRALE 117
Score = 48 (22.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 105 VKAASEKEIEDIRKALDRESSSKS 128
VKA E EIE R+ LD E+ S
Sbjct: 389 VKARLELEIETYRRLLDGEAQGDS 412
>UNIPROTKB|Q08DH7 [details] [associations]
symbol:INA "Alpha-internexin" species:9913 "Bos taurus"
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0007399 GO:GO:0030154 GO:GO:0005198
EMBL:BC123743 IPI:IPI00691285 RefSeq:NP_001069426.1
UniGene:Bt.65345 ProteinModelPortal:Q08DH7 SMR:Q08DH7 STRING:Q08DH7
PRIDE:Q08DH7 Ensembl:ENSBTAT00000003517 GeneID:532236
KEGG:bta:532236 CTD:9118 eggNOG:NOG149366
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 InParanoid:Q08DH7 KO:K07608 OMA:ASSYRKV
OrthoDB:EOG4R5031 NextBio:20875638 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 Uniprot:Q08DH7
Length = 499
Score = 97 (39.2 bits), Expect = 0.00043, P = 0.00043
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRHA-EPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKS 128
D+R L+ SS+++
Sbjct: 148 RDLRAQLEEASSARA 162
>UNIPROTKB|E2RE99 [details] [associations]
symbol:INA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005198 CTD:9118 GeneTree:ENSGT00690000102043 KO:K07608
OMA:ASSYRKV GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AAEX03015496 RefSeq:XP_543999.1 Ensembl:ENSCAFT00000016481
GeneID:486869 KEGG:cfa:486869 NextBio:20860578 Uniprot:E2RE99
Length = 500
Score = 97 (39.2 bits), Expect = 0.00043, P = 0.00043
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
I R EK +L+ LNDR A +IE V +L+ H E +V ++E+
Sbjct: 89 IIRTNEKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQRHA-EPSRVGELFQREL 147
Query: 114 EDIRKALDRESSSKS 128
D+R L+ SS+++
Sbjct: 148 RDLRAQLEEASSARA 162
>ZFIN|ZDB-GENE-060503-86 [details] [associations]
symbol:krt17 "keratin 17" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IEP] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 ZFIN:ZDB-GENE-060503-86
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0031101 HOGENOM:HOG000230975
KO:K07604 eggNOG:NOG148784 OrthoDB:EOG483D4W CTD:3872
GeneTree:ENSGT00560000076905 EMBL:BX323079 OMA:VENANIV
EMBL:BC153512 IPI:IPI00498656 RefSeq:NP_001076574.1
UniGene:Dr.162023 STRING:Q1LXJ1 Ensembl:ENSDART00000105004
GeneID:100034647 KEGG:dre:100034647 InParanoid:Q1LXJ1
NextBio:20788423 Uniprot:Q1LXJ1
Length = 423
Score = 74 (31.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 53 IISRRQEKNELKNLNDRLAQYIELVQKLQNDKA 85
I S EK ++NLNDRLA Y+E V+ L+ + A
Sbjct: 67 IDSSANEKATMQNLNDRLASYLEKVRILEKENA 99
Score = 41 (19.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 103 KKVKAASEKEIEDIRKALDRESSSKSAL 130
+ ++ A E +I +RK LD + ++S L
Sbjct: 166 QSMRHAVEADISGLRKVLDELTMTRSDL 193
>ZFIN|ZDB-GENE-991110-22 [details] [associations]
symbol:cki "type I cytokeratin" species:7955 "Danio
rerio" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-991110-22 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 HSSP:P08670 KO:K07604 UniGene:Dr.162034 EMBL:AF197880
IPI:IPI00496576 RefSeq:NP_571183.1 ProteinModelPortal:Q9PUB6
STRING:Q9PUB6 PRIDE:Q9PUB6 GeneID:30328 KEGG:dre:30328 CTD:30328
NextBio:20806761 ArrayExpress:Q9PUB6 Bgee:Q9PUB6 Uniprot:Q9PUB6
Length = 425
Score = 69 (29.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQNDKA 85
EK ++NLNDRLA Y+E V+ L+ A
Sbjct: 78 EKATMQNLNDRLASYLEKVRTLERANA 104
Score = 46 (21.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 105 VKAASEKEIEDIRKALDRESSS 126
+K E EI + R+ LD E+SS
Sbjct: 367 IKTRLEMEIAEYRRLLDGEASS 388
>UNIPROTKB|F8W835 [details] [associations]
symbol:PRPH "Peripherin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 PANTHER:PTHR23239 EMBL:AC125611
HGNC:HGNC:9461 IPI:IPI00795995 ProteinModelPortal:F8W835 SMR:F8W835
PRIDE:F8W835 Ensembl:ENST00000451891 ArrayExpress:F8W835
Bgee:F8W835 Uniprot:F8W835
Length = 89
Score = 63 (27.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 53 IISRRQEKNELKNLNDRLAQYIE 75
+ +R EK EL+ LNDR A +IE
Sbjct: 10 LATRSNEKQELQELNDRFANFIE 32
Score = 33 (16.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 110 EKEIEDIRKALD 121
EKE+ ++R+ L+
Sbjct: 32 EKELRELRRELE 43
>UNIPROTKB|E1BRI6 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GeneTree:ENSGT00560000076873
EMBL:AADN02055473 IPI:IPI00868474 Ensembl:ENSGALT00000041010
ArrayExpress:E1BRI6 Uniprot:E1BRI6
Length = 824
Score = 98 (39.6 bits), Expect = 0.00063, P = 0.00063
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ H ++ A E+E+
Sbjct: 91 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQKHAGR-AQLGDAYEQEL 149
Query: 114 EDIRKALDRESSSKSALAI 132
++R AL++ S K+ + +
Sbjct: 150 RELRGALEQVSHEKAQIQL 168
>UNIPROTKB|F1NUT7 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005883
"neurofilament" evidence=IEA] [GO:0008088 "axon cargo transport"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0045110 "intermediate filament bundle assembly" evidence=IEA]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0000226 GO:GO:0005198
GO:GO:0031594 GO:GO:0008088 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GeneTree:ENSGT00560000076873
GO:GO:0045110 IPI:IPI00589424 OMA:GPGGDYK EMBL:AADN02055473
Ensembl:ENSGALT00000000423 ArrayExpress:F1NUT7 Uniprot:F1NUT7
Length = 858
Score = 98 (39.6 bits), Expect = 0.00066, P = 0.00066
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ H ++ A E+E+
Sbjct: 91 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQKHAGR-AQLGDAYEQEL 149
Query: 114 EDIRKALDRESSSKSALAI 132
++R AL++ S K+ + +
Sbjct: 150 RELRGALEQVSHEKAQIQL 168
>UNIPROTKB|P16053 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
OrthoDB:EOG4VMFFD EMBL:X17102 EMBL:X05558 IPI:IPI00589424
PIR:S15762 RefSeq:NP_001095200.1 UniGene:Gga.4179
ProteinModelPortal:P16053 SMR:P16053 IntAct:P16053 PRIDE:P16053
GeneID:396206 KEGG:gga:396206 CTD:4741 eggNOG:NOG151229
InParanoid:P16053 KO:K04573 NextBio:20816258 Uniprot:P16053
Length = 858
Score = 98 (39.6 bits), Expect = 0.00066, P = 0.00066
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 54 ISRRQEKNELKNLNDRLAQYIELVQKLQNDKAXXXXXXXXXXXXHTTEFKKVKAASEKEI 113
+SR EK +L+ LNDR A YIE V L+ H ++ A E+E+
Sbjct: 91 LSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQKHAGR-AQLGDAYEQEL 149
Query: 114 EDIRKALDRESSSKSALAI 132
++R AL++ S K+ + +
Sbjct: 150 RELRGALEQVSHEKAQIQL 168
>UNIPROTKB|F1RXG3 [details] [associations]
symbol:KRT12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060429 "epithelium development" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0061303 GO:GO:0060429
OMA:QNDYSKY GeneTree:ENSGT00560000077101 EMBL:CU694587
Ensembl:ENSSSCT00000019008 Uniprot:F1RXG3
Length = 501
Score = 70 (29.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQ 81
EK +KNLNDRLA Y++ V+ L+
Sbjct: 131 EKETMKNLNDRLASYLDKVRALE 153
Score = 45 (20.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 105 VKAASEKEIEDIRKALDRES 124
VKA E EIE R+ LD E+
Sbjct: 425 VKARLELEIETYRRLLDGEA 444
>ZFIN|ZDB-GENE-040718-88 [details] [associations]
symbol:zgc:92035 "zgc:92035" species:7955 "Danio
rerio" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 ZFIN:ZDB-GENE-040718-88
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HOGENOM:HOG000230975 KO:K07604 GeneTree:ENSGT00560000076905
eggNOG:KOG0508 EMBL:BX469912 EMBL:BC076485 IPI:IPI00489561
RefSeq:NP_001002392.1 UniGene:Dr.80187 Ensembl:ENSDART00000041533
Ensembl:ENSDART00000128364 GeneID:436665 KEGG:dre:436665
InParanoid:Q6DG66 NextBio:20831108 Uniprot:Q6DG66
Length = 425
Score = 69 (29.3 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 59 EKNELKNLNDRLAQYIELVQKLQ 81
EK ++NLNDRLA YIE V+ L+
Sbjct: 92 EKTTMQNLNDRLASYIEKVRCLE 114
Score = 44 (20.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 105 VKAASEKEIEDIRKALDRESSSKSAL 130
V+ E +I ++R+ LD+ + SK+ L
Sbjct: 187 VRQCVESDIANLRRLLDQATLSKAEL 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.305 0.121 0.300 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 147 91 0.00091 102 3 10 23 0.42 30
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 484 (52 KB)
Total size of DFA: 100 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 14.65u 0.07s 14.72t Elapsed: 00:00:12
Total cpu time: 14.65u 0.07s 14.72t Elapsed: 00:00:15
Start: Thu Aug 15 12:19:59 2013 End: Thu Aug 15 12:20:14 2013