BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2006
(351 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VALKIIKNVEKY+EAARLEIN L+KI EKDP+ ++LCV+M DWFDYHGHMCI+FE+LGLS
Sbjct: 62 VALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLS 121
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRHMSYQLIYAVDYNN 139
FDFLK+NNYLPY + QVRHM++QL A +N L + Y + YN
Sbjct: 122 TFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNL 181
Query: 140 XXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+R++DFGSATFD EHHSTIVSTRHYRAPE
Sbjct: 182 EKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPE 223
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 84/116 (72%), Gaps = 24/116 (20%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL-- 313
+R++DFGSATFD EHHSTIVSTRHYRAPEVILELGW+QPCDVWSIGCIIFE Y+G TL
Sbjct: 195 VRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQ 254
Query: 314 ---------------------MARKT-KTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
M RKT K KYFY G+LDWDE +AGRYVRENCKPL
Sbjct: 255 THDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 182 RYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
RY+ S+ EEH QLFDLI MLEYEP++R++L EAL+HPFF +L
Sbjct: 312 RYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 22 SVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81
S VALKII+NV KYREAARLEIN L+KI EKD + LCV M DWF++HGHMCIAFE+LG
Sbjct: 55 SQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG 114
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRHMSYQLIYAVDY 137
+ F+FLKENN+ PY L VRHM+YQL +A EN L + + Y
Sbjct: 115 KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 174
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
N IR+ DFGSATFD EHH+TIV+TRHYR PE
Sbjct: 175 NEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 218
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 75/116 (64%), Gaps = 24/116 (20%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
IR+ DFGSATFD EHH+TIV+TRHYR PEVILELGWAQPCDVWSIGCI+FE Y G TL
Sbjct: 190 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
Query: 316 ------------------------RKTKTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
R K KYFY G L WDE + GRYV+ENCKPL
Sbjct: 250 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL 305
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 183 YMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229
YM D EH QLFDL+ +MLE++P++RI+L+EAL HPFF L R
Sbjct: 308 YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 22 SVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81
S VALKII+NV KYREAARLEIN L+KI EKD + LCV M DWF++HGHMCIAFE+LG
Sbjct: 78 SQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG 137
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRHMSYQLIYAVDY 137
+ F+FLKENN+ PY L VRHM+YQL +A EN L + + Y
Sbjct: 138 KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 197
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
N IR+ DFGSATFD EHH+TIV+TRHYR PE
Sbjct: 198 NEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 241
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 75/116 (64%), Gaps = 24/116 (20%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
IR+ DFGSATFD EHH+TIV+TRHYR PEVILELGWAQPCDVWSIGCI+FE Y G TL
Sbjct: 213 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
Query: 316 ------------------------RKTKTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
R K KYFY G L WDE + GRYV+ENCKPL
Sbjct: 273 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL 328
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 183 YMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229
YM D EH QLFDL+ +MLE++P++RI+L+EAL HPFF L R
Sbjct: 331 YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 377
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 22 SVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81
S VALKII+NV KYREAARLEIN L+KI EKD + LCV M DWF++HGHMCIAFE+LG
Sbjct: 46 SQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG 105
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRHMSYQLIYAVDY 137
+ F+FLKENN+ PY L VRHM+YQL +A EN L + + Y
Sbjct: 106 KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 165
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
N IR+ DFGSATFD EHH+TIV+TRHYR PE
Sbjct: 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 209
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 75/116 (64%), Gaps = 24/116 (20%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
IR+ DFGSATFD EHH+TIV+TRHYR PEVILELGWAQPCDVWSIGCI+FE Y G TL
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
Query: 316 ------------------------RKTKTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
R K KYFY G L WDE + GRYV+ENCKPL
Sbjct: 241 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL 296
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 183 YMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL-PSSVRVHAQTQADR 238
YM D EH QLFDL+ +MLE++P++RI+L+EAL HPFF L P H R
Sbjct: 299 YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPSR 355
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KI+KNV++Y EAAR EI L+ + DPN CV+ML+WF++HGH+CI FE+LGLS
Sbjct: 43 VAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 102
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLI----YAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139
+DF+KEN +LP+ LD +R M+YQ+ + N L + Q Y YN
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP 162
Query: 140 XXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMA 185
DI+++DFGSAT+DDEHHST+VSTRHYRAPE +A
Sbjct: 163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA 208
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 24/117 (20%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL- 313
DI+++DFGSAT+DDEHHST+VSTRHYRAPEVIL LGW+QPCDVWSIGCI+ E YLG T+
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 314 ----------------------MARKT-KTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
M +KT K KYF+H +LDWDE +AGRYV CKPL
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 165 DEHHST-IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
DEH S +R + + +M S D EH +LFDLI KMLEY+P++RI+L EAL+HPFFD
Sbjct: 275 DEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334
Query: 224 LPSSV 228
L S+
Sbjct: 335 LKKSI 339
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 105/166 (63%), Gaps = 4/166 (2%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KI+KNV++Y EAAR EI L+ + DPN CV+ML+WF++HGH+CI FE+LGLS
Sbjct: 43 VAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 102
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLI----YAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139
+DF+KEN +LP+ LD +R M+YQ+ + N L + Q Y YN
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP 162
Query: 140 XXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMA 185
DI+++DFGSAT+DDEHHST+V RHYRAPE +A
Sbjct: 163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILA 208
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 24/117 (20%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL- 313
DI+++DFGSAT+DDEHHST+V RHYRAPEVIL LGW+QPCDVWSIGCI+ E YLG T+
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 314 ----------------------MARKT-KTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
M +KT K KYF+H +LDWDE +AGRYV CKPL
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 165 DEHHST-IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
DEH S +R + + +M S D EH +LFDLI KMLEY+P++RI+L EAL+HPFFD
Sbjct: 275 DEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334
Query: 224 LPSSV 228
L S+
Sbjct: 335 LKKSI 339
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 216 LRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIV 275
L P+F+K S + V T +I I+LIDFG ATF ++H +I+
Sbjct: 170 LDDPYFEK--SLITVRRVTDGKKIQIYRTKS-------TGIKLIDFGCATFKSDYHGSII 220
Query: 276 STRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
+TR YRAPEVIL LGW D+WS GC++ ELY G L
Sbjct: 221 NTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 31/177 (17%)
Query: 25 ALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLSV 84
A+K+++N++KY +A++E + L+KI + D + VK F Y+ HMC+ FE LG S+
Sbjct: 64 AVKVVRNIKKYTRSAKIEADILKKI-QNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSL 122
Query: 85 FDFLKENNYLPY--------------SLDQVRHMSYQLIYAKENNYL---PY---SLDQV 124
++ + NNY + +L+ +R MS K N L PY SL V
Sbjct: 123 YEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITV 182
Query: 125 RHMSYQLIYAVDYNNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
R ++ + I+LIDFG ATF ++H +I++TR YRAPE
Sbjct: 183 RRVT----------DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPE 229
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 18 YEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
++V VALK+++N +++ A EI L+ + ++D + + ML+ F + H+C+ F
Sbjct: 119 HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
E+L +++++ +K+N + +SL VR ++ ++ + +L + R + L
Sbjct: 179 ELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD------ALHKNRIIHCDL------ 226
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS 186
I++IDFGS+ ++ + T + +R YRAPE + +
Sbjct: 227 -KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314
I++IDFGS+ ++ + T + +R YRAPEVIL + P D+WS+GCI+ EL G L+
Sbjct: 241 IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 194 LFDLISKMLEYEPSERISLSEALRHPFFDK 223
D + + LE++P+ R++ +ALRHP+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 18 YEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
++V VALK+++N +++ A EI L+ + ++D + + ML+ F + H+C+ F
Sbjct: 119 HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
E+L +++++ +K+N + +SL VR ++ ++ + +L + R + L
Sbjct: 179 ELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD------ALHKNRIIHCDL------ 226
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS 186
I++IDFGS+ ++ + T + +R YRAPE + +
Sbjct: 227 -KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314
I++IDFGS+ ++ + T + +R YRAPEVIL + P D+WS+GCI+ EL G L+
Sbjct: 241 IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 194 LFDLISKMLEYEPSERISLSEALRHPFFDK 223
D + + LE++P+ R++ +ALRHP+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 18 YEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
++V VALK+++N +++ A EI L+ + ++D + + ML+ F + H+C+ F
Sbjct: 119 HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
E+L +++++ +K+N + +SL VR ++ ++ + +L + R + L
Sbjct: 179 ELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD------ALHKNRIIHCDL------ 226
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS 186
I++IDFGS+ ++ + + +R YRAPE + +
Sbjct: 227 -KPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGA 274
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314
I++IDFGS+ ++ + + +R YRAPEVIL + P D+WS+GCI+ EL G L+
Sbjct: 241 IKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 194 LFDLISKMLEYEPSERISLSEALRHPFFDK 223
D + + LE++P+ R++ +ALRHP+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 47/187 (25%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGE-----KDPNGRHLCVKMLDWFDYHG----HMC 74
VA+KI++ + Y EAA EI LQ++ + +D G + +K+LD F++ G H+
Sbjct: 47 VAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVV 106
Query: 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134
+ FE+LG ++ +K + H LIY V+ +S QL+
Sbjct: 107 MVFEVLGENLLALIK----------KYEHRGIPLIY-------------VKQISKQLLLG 143
Query: 135 VDY---------------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRA 179
+DY N I++ D G+A + DEH++ + TR YR+
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 203
Query: 180 PERYMAS 186
PE + +
Sbjct: 204 PEVLLGA 210
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ D G+A + DEH++ + TR YR+PEV+L W D+WS C+IFEL G
Sbjct: 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E+Y S DE +++ D +S ML+ +P +R + HP+
Sbjct: 298 EKYKFSKDEA-KEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 47/187 (25%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGE-----KDPNGRHLCVKMLDWFDYHG----HMC 74
VA+KI++ + Y EAA EI LQ++ + +D G + +K+LD F++ G H+
Sbjct: 47 VAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVV 106
Query: 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134
+ FE+LG ++ +K + H LIY V+ +S QL+
Sbjct: 107 MVFEVLGENLLALIK----------KYEHRGIPLIY-------------VKQISKQLLLG 143
Query: 135 VDY---------------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRA 179
+DY N I++ D G+A + DEH++ + TR YR+
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 203
Query: 180 PERYMAS 186
PE + +
Sbjct: 204 PEVLLGA 210
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ D G+A + DEH++ + TR YR+PEV+L W D+WS C+IFEL G
Sbjct: 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E+Y S DE +++ D +S ML+ +P +R + HP+
Sbjct: 298 EKYKFSKDEA-KEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 158 CELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 313 L 313
L
Sbjct: 218 L 218
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 180
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 181 TRWYRAPE 188
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C++R++DFG A DE + V+TR YRAPE++L + + Q D+WS+GCI+ EL G
Sbjct: 160 CELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
Query: 313 L 313
L
Sbjct: 220 L 220
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
C++R++DFG A DE + V+TR YRAPE
Sbjct: 160 CELRILDFGLARQADEEMTGYVATRWYRAPE 190
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ +ML + +R+S +EAL H +F +
Sbjct: 280 IDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D + V TR YRAPEVIL + + Q D+WS+GCI+ E+ G T
Sbjct: 163 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
Query: 313 LMARK 317
L K
Sbjct: 223 LFKGK 227
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 117 LPYSLDQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHH 168
L +S ++++++ YQ++ + Y + C+++++DFG A D
Sbjct: 121 LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 180
Query: 169 STIVSTRHYRAPE 181
+ V TR YRAPE
Sbjct: 181 TGYVVTRWYRAPE 193
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 193 QLFDLISKMLEYEPSERISLSEALRHPFFD 222
Q DL+ KMLE + +R++ ++AL HPFF+
Sbjct: 281 QAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D + V TR YRAPEVIL + + Q D+WS+GCI+ E+ G T
Sbjct: 181 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
Query: 313 LMARK 317
L K
Sbjct: 241 LFKGK 245
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 117 LPYSLDQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHH 168
+ +S ++++++ YQ++ + Y + C+++++DFG A D
Sbjct: 139 MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 198
Query: 169 STIVSTRHYRAPE 181
+ V TR YRAPE
Sbjct: 199 TGYVVTRWYRAPE 211
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 193 QLFDLISKMLEYEPSERISLSEALRHPFFD 222
Q DL+ KMLE + +R++ ++AL HPFF+
Sbjct: 299 QAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 173 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 313 L 313
L
Sbjct: 233 L 233
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 195
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 196 TRWYRAPE 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 313 L 313
L
Sbjct: 234 L 234
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 197 TRWYRAPE 204
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 191 TRWYRAPE 198
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 313 L 313
L
Sbjct: 234 L 234
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 197 TRWYRAPE 204
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 169 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 313 L 313
L
Sbjct: 229 L 229
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 192 TRWYRAPE 199
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 313 L 313
L
Sbjct: 234 L 234
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 197 TRWYRAPE 204
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 191 TRWYRAPE 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 313 L 313
L
Sbjct: 224 L 224
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 187 TRWYRAPE 194
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 191 TRWYRAPE 198
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 182 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 313 L 313
L
Sbjct: 242 L 242
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 205 TRWYRAPE 212
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 172 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
Query: 313 L 313
L
Sbjct: 232 L 232
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 135 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 194
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 195 TRWYRAPE 202
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 313 L 313
L
Sbjct: 227 L 227
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 190 TRWYRAPE 197
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 182 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 313 L 313
L
Sbjct: 242 L 242
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 205 TRWYRAPE 212
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 185 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 313 L 313
L
Sbjct: 245 L 245
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 208 TRWYRAPE 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 313 L 313
L
Sbjct: 227 L 227
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 190 TRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 161 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
Query: 313 L 313
L
Sbjct: 221 L 221
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 124 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 184 TRWYRAPE 191
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 181 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 313 L 313
L
Sbjct: 241 L 241
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 204 TRWYRAPE 211
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 313 L 313
L
Sbjct: 224 L 224
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 187 TRWYRAPE 194
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 313 L 313
L
Sbjct: 224 L 224
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 187 TRWYRAPE 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 181 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 313 L 313
L
Sbjct: 241 L 241
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 204 TRWYRAPE 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 313 L 313
L
Sbjct: 218 L 218
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 181 TRWYRAPE 188
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 313 L 313
L
Sbjct: 219 L 219
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 182 TRWYRAPE 189
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 313 L 313
L
Sbjct: 219 L 219
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 182 TRWYRAPE 189
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 160 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
Query: 313 L 313
L
Sbjct: 220 L 220
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 123 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 182
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 183 TRWYRAPE 190
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 313 L 313
L
Sbjct: 218 L 218
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 181 TRWYRAPE 188
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 74/293 (25%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPN--GRHLCVKMLDWFDYHG----HMCIAF 77
VA+K++K+ E Y E A EI L+ + DPN R + V++LD F G H+C+
Sbjct: 49 VAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM-- 106
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
VF+ L + L + ++NY L V+ + Q++ +DY
Sbjct: 107 ------VFEVLGH---------------HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 145
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDL 197
R+I H+ I PE + S +E++ + L
Sbjct: 146 -----------LHTKCRII-----------HTDI-------KPENILLSVNEQY--IRRL 174
Query: 198 ISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIR 257
++ E++ S P S + A ++
Sbjct: 175 AAEATEWQRS--------------GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVK 220
Query: 258 LIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+ D G+A + +H + + TR YR+ EV++ G+ P D+WS C+ FEL G
Sbjct: 221 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 273
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222
E+Y S EE D + MLE P +R + +E LRHP+ +
Sbjct: 340 EKYEWSQ-EEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 74/305 (24%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPN--GRHLCVKMLDWFDYHG----HMCIAF 77
VA+K++K+ E Y E A EI L+ + DPN R + V++LD F G H+C+
Sbjct: 65 VAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM-- 122
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
VF+ L H+ +I ++NY L V+ + Q++ +DY
Sbjct: 123 ------VFEVLG------------HHLLKWII---KSNYQGLPLPCVKKIIQQVLQGLDY 161
Query: 138 NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDL 197
R+I H+ I PE + S +E++ + L
Sbjct: 162 -----------LHTKCRII-----------HTDI-------KPENILLSVNEQY--IRRL 190
Query: 198 ISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIR 257
++ E++ S P S + A ++
Sbjct: 191 AAEATEWQRS--------------GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVK 236
Query: 258 LIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317
+ D G+A + +H + + TR YR+ EV++ G+ P D+WS C+ FEL G L
Sbjct: 237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 318 TKTKY 322
+ +Y
Sbjct: 297 SGEEY 301
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222
E+Y S EE D + MLE P +R + +E LRHP+ +
Sbjct: 356 EKYEWSQ-EEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 313 L 313
L
Sbjct: 218 L 218
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 181 TRWYRAPE 188
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D V TR YRAPEVIL + + Q D+WS+GCI+ E+ G T
Sbjct: 165 CELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
Query: 313 L 313
L
Sbjct: 225 L 225
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D+++ + YQ++ + Y + C+++++DFG A D V
Sbjct: 128 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV 187
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 188 TRWYRAPE 195
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
+L+ KML + +R++ EAL HP+F+ L
Sbjct: 286 NLLEKMLVLDAEQRVTAGEALAHPYFESL 314
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 182 CELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 313 L 313
L
Sbjct: 242 L 242
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ V+
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA 204
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 205 TRWYRAPE 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 185 CELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 313 L 313
L
Sbjct: 245 L 245
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ V+
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA 207
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 208 TRWYRAPE 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++D+G A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++D+G A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D+ + V+TR YRAPE++L + + D+WS+GCI+ EL G T
Sbjct: 191 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
Query: 313 L 313
L
Sbjct: 251 L 251
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A D+ + V+
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 214 TRWYRAPE 221
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + +RI+ SEAL HP+F +
Sbjct: 312 DLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++ FG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++ FG A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A + + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 313 L 313
L
Sbjct: 229 L 229
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A + + V+
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 192 TRWYRAPE 199
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A + + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 313 L 313
L
Sbjct: 229 L 229
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A + + V+
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 192 TRWYRAPE 199
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A + + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 313 L 313
L
Sbjct: 229 L 229
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DFG A + + V+
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 192 TRWYRAPE 199
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
++R++DFG A DE + V+TR YRAPE++L + + Q D+WS+GCI+ EL G
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
++R++DFG A DE + V+TR YRAPE
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPE 198
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ +ML + +R+S +EAL H +F +
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
++R++DFG A DE + V+TR YRAPE++L + + Q D+WS+GCI+ EL G
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
++R++DFG A DE + V+TR YRAPE
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPE 198
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ +ML + +R+S +EAL H +F +
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++D G A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++D G A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHHSTI--VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 165 CTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 224
Query: 312 TL 313
L
Sbjct: 225 VL 226
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 278 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 168 SELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 313 L 313
L
Sbjct: 228 L 228
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + +++++DFG A D+ + V+
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 191 TRWYRAPE 198
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + + V TR+YRAPEVIL +G+A D+WS+GCI+ EL G
Sbjct: 163 CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGC 222
Query: 312 TL 313
+
Sbjct: 223 VI 224
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 187 DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
D + Q DL+SKML +P +RIS+ EALRHP+
Sbjct: 287 DKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G TL
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+++++DFG A D+ + V+TR YRAPE
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPE 192
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 164 SELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 313 L 313
L
Sbjct: 224 L 224
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + +++++DFG A D+ + V+
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 187 TRWYRAPE 194
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G TL
Sbjct: 174 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+++++DFG A D+ + V+TR YRAPE
Sbjct: 174 ELKILDFGLARHTDDEMTGYVATRWYRAPE 203
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++D G A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++D G A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
C ++++DFG A + + V TR+YRAPEVIL +G+ + D+WS+GCI+ EL G
Sbjct: 161 CTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 187 DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
D + Q DL+SKML +P +RIS+ EALRHP+
Sbjct: 285 DKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++D G A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++D G A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G TL
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+++++DFG A D+ + V+TR YRAPE
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPE 197
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+++++DFG A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G TL
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+++++DFG A D+ + V+TR YRAPE
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPE 197
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
C+++++DF A D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 CELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + C+++++DF A D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
Query: 312 TL 313
L
Sbjct: 224 VL 225
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 277 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 188 DEEHR-----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
D EH Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 283 DSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KIIKN + + A++E+ L+ + + D ++ V + F + H+C+ FE+L +
Sbjct: 82 VAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN 141
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNXXXX 143
++D L+ N+ SL+ R + Q+ A +L + H + + N
Sbjct: 142 LYDLLRNTNFRGVSLNLTRKFAQQMCTALL--FLATPELSIIHCDLKPENILLCNPKRSA 199
Query: 144 XXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
I+++DFGS+ + + +R YR+PE
Sbjct: 200 ---------IKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
I+++DFGS+ + + +R YR+PEV+L + + D+WS+GCI+ E++ G L +
Sbjct: 200 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DLI +ML+Y+P RI AL+H FF K
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KIIKN + + A++E+ L+ + + D ++ V + F + H+C+ FE+L +
Sbjct: 63 VAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN 122
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNXXXX 143
++D L+ N+ SL+ R + Q+ A +L + H + + N
Sbjct: 123 LYDLLRNTNFRGVSLNLTRKFAQQMCTALL--FLATPELSIIHCDLKPENILLCNPKRSA 180
Query: 144 XXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
I+++DFGS+ + + +R YR+PE
Sbjct: 181 ---------IKIVDFGSSCQLGQRIYQXIQSRFYRSPE 209
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
I+++DFGS+ + + +R YR+PEV+L + + D+WS+GCI+ E++ G L +
Sbjct: 181 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 240
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DLI +ML+Y+P RI AL+H FF K
Sbjct: 332 DLILRMLDYDPKTRIQPYYALQHSFFKK 359
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KIIKN + + A++E+ L+ + + D ++ V + F + H+C+ FE+L +
Sbjct: 82 VAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN 141
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNXXXX 143
++D L+ N+ SL+ R + Q+ A +L + H + + N
Sbjct: 142 LYDLLRNTNFRGVSLNLTRKFAQQMCTALL--FLATPELSIIHCDLKPENILLCNPKRXA 199
Query: 144 XXXXXXXCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
I+++DFGS+ + + +R YR+PE
Sbjct: 200 ---------IKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315
I+++DFGS+ + + +R YR+PEV+L + + D+WS+GCI+ E++ G L +
Sbjct: 200 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DLI +ML+Y+P RI AL+H FF K
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312
+++++DFG D+ + V+TR YRAPE++L + + Q D+WS+GCI+ EL G T
Sbjct: 162 SELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 313 L 313
L
Sbjct: 222 L 222
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 122 DQVRHMSYQLIYAVDY--------NNXXXXXXXXXXXCDIRLIDFGSATFDDEHHSTIVS 173
D V+ + YQ++ + Y + +++++DFG D+ + V+
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVA 184
Query: 174 TRHYRAPE 181
TR YRAPE
Sbjct: 185 TRWYRAPE 192
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 162 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 275 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 156 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 157 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 157 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D+++ DFG AT FD E T+ T +Y APEV+ + G + D+WS+GCI++ L +G
Sbjct: 180 DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 152 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPE 181
D+++ DFG AT FD E T+ T +Y APE
Sbjct: 180 DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 168 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 281 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 181 CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 307 L 307
+
Sbjct: 241 M 241
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ +ML + P++RI++ EAL HP+ ++
Sbjct: 307 LDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 106 YQLIYAKE--NNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIRLIDFGSAT 162
Y+L+ +++ N+++ Y L Q+ R + Y V + + CD+++ DFG A
Sbjct: 133 YKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
Query: 163 FDDEHH------STIVSTRHYRAPERYMAS 186
D H + V+TR YRAPE + S
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 157 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 270 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 8/59 (13%)
Query: 254 CDIRLIDFGSA-----TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A +F E V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 163 CTLKILDFGLARTAGTSFMMEPE---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 163 ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 307 L 307
+
Sbjct: 223 M 223
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 289 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 115 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 307 L 307
+
Sbjct: 219 M 219
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 285 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 111 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 307 L 307
+
Sbjct: 223 M 223
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 115 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF 221
DL+ KML + P +RI + +AL HP+
Sbjct: 289 LDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 8/59 (13%)
Query: 254 CDIRLIDFGSA-----TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
C ++++DFG A +F E V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 163 CTLKILDFGLARTAGTSFMMEPE---VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 218
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 307 L 307
+
Sbjct: 221 M 221
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 287 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 113 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 307 L 307
+
Sbjct: 219 M 219
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 285 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 111 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 307 L 307
+
Sbjct: 226 M 226
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 292 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 118 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 170 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 167 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 226
Query: 307 L 307
+
Sbjct: 227 M 227
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 293 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 119 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 170
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 171 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 158 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 217
Query: 307 L 307
+
Sbjct: 218 M 218
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 284 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 110 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 161
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 162 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 307 L 307
+
Sbjct: 225 M 225
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 117 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 169 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 228
Query: 307 L 307
+
Sbjct: 229 M 229
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 295 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 121 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 172
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 173 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 307 L 307
+
Sbjct: 221 M 221
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 287 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 113 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 181 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 307 L 307
+
Sbjct: 241 M 241
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 307 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 133 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 184
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 307 L 307
+
Sbjct: 225 M 225
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 117 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 307 L 307
+
Sbjct: 225 M 225
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 117 YKLLKCQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+L DFG A +++V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF----- 213
Query: 314 MARKTKTKYFYHGKLDWDEKG 334
+ K + G D D+ G
Sbjct: 214 -----RRKPLFRGSSDVDQLG 229
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
E+++ DE + DL+ K L + P++RIS AL HP+F L
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+L DFG A +++V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF----- 213
Query: 314 MARKTKTKYFYHGKLDWDEKG 334
+ K + G D D+ G
Sbjct: 214 -----RRKPLFRGSSDVDQLG 229
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
E+++ DE + DL+ K L + P++RIS AL HP+F L
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+L DFG A +++V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF----- 213
Query: 314 MARKTKTKYFYHGKLDWDEKG 334
+ K + G D D+ G
Sbjct: 214 -----RRKPLFRGSSDVDQLG 229
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E+++ DE + DL+ K L + P++RIS AL HP+F
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHHS------TIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 307 L 307
+
Sbjct: 225 M 225
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 117 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
Query: 155 LIDFGSATFDDEHHS------TIVSTRHYRAPERYMAS 186
+ DFG A D H V+TR YRAPE + S
Sbjct: 169 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 254 CDIRLIDFGSATFDDEHHS------TIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306
CD+++ DFG A D H V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 307 L 307
+
Sbjct: 226 M 226
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 292 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + CD++
Sbjct: 118 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169
Query: 155 LIDFGSATFDDEHHS------TIVSTRHYRAPERYMAS 186
+ DFG A D H V+TR YRAPE + S
Sbjct: 170 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D+++ DFG AT FD E + T +Y APEV+ + G + D+WS+GCI++ L +G
Sbjct: 180 DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E T+ T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 155 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E T+ T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 155 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E T+ T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 159 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D+++ DFG AT FD E + T +Y APEV+ + G + D+WS+GCI++ L +G
Sbjct: 180 DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D+++ DFG AT FD E + T +Y APEV+ + G + D+WS+GCI++ L +G
Sbjct: 164 DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFE 306
++L DFG A +DDE V+TR YRAPE+++ ++ + + DVW+IGC++ E
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDE-----VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE 217
Query: 307 LYLGITLMARKTKTKYFYH 325
+++G L + YH
Sbjct: 218 MFMGEPLFPGDSDIDQLYH 236
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+++ D G+A + +H + + TR YR+ EV++ G++ P D+WS C+ FEL G
Sbjct: 227 VKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATG 281
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPN--GRHLCVKMLDWFDYHG----HMCIAF 77
VA+K++K+ + Y E A EI L+ + E DP+ + + V+++D F G H+C+ F
Sbjct: 59 VAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVF 118
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLI 109
E+LG + ++ ++NY + V+ + Q++
Sbjct: 119 EVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVL 150
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222
E+ Q D + MLE P +R S E LRHP+ +
Sbjct: 355 EDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
I+L DFG A T +++ V+TR YR+PE+++ + + P DVW+IGC+ EL G+
Sbjct: 141 IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
Query: 312 TLMARKTKTKYFY 324
L K+ Y
Sbjct: 201 PLWPGKSDVDQLY 213
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 168 HSTIVSTRHYRAPERYMASDDEEHRQL---------FDLISKMLEYEPSERISLSEALRH 218
H + ST Y + + +D E +L L+ L +P+ER++ + L H
Sbjct: 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
Query: 219 PFFDKL 224
P+F+ +
Sbjct: 286 PYFENI 291
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+G I+ E+ G
Sbjct: 163 ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++DFG A + V TR+YRAPEVIL +G+ + D+WS+G I+ E+ G
Sbjct: 163 ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 312 TL 313
L
Sbjct: 223 VL 224
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 180 PERYMASDDEEHR----QLFDLISKMLEYEPSERISLSEALRHPFFD 222
P+ +D E ++ Q DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E + T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 177 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E + T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 179 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E + T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 153 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 162 DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 287 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 152 DIRLIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
D+++ DFG A D H + V+TR YRAPE + S
Sbjct: 162 DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 287 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 152 DIRLIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
D+++ DFG A D H + V+TR YRAPE + S
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 164 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF 221
DL+ KML + P +RI + +AL HP+
Sbjct: 289 LDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + D++
Sbjct: 115 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLK 166
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 152 DIRLIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
D+++ DFG A D H + V+TR YRAPE + S
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 287 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 152 DIRLIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
D+++ DFG A D H + V+TR YRAPE + S
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 152 DIRLIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
D+++ DFG A D H + V+TR YRAPE + S
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 255 DIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
D+++ DFG A D H + V+TR YRAPE++L G+ + D+WS+GCI+ E+
Sbjct: 182 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 307 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 96 YSLDQVRHMSYQLIYAKENNYLPYSLDQV-RHMSYQLIYAVDYNNXXXXXXXXXXXCDIR 154
Y L + +H+S N+++ Y L Q+ R + Y V + + D++
Sbjct: 133 YKLLKTQHLS--------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 184
Query: 155 LIDFGSATFDDEHH------STIVSTRHYRAPERYMAS 186
+ DFG A D H + V+TR YRAPE + S
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 14/70 (20%)
Query: 254 CDIRLIDFGSATFDDEHHS-------------TIVSTRHYRAPEVILELG-WAQPCDVWS 299
CD+++ DFG A DE + V+TR YRAPEV+L +++ DVWS
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 300 IGCIIFELYL 309
GCI+ EL+L
Sbjct: 209 CGCILAELFL 218
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +ML ++P++RI+ EAL HP+
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 13/49 (26%)
Query: 151 CDIRLIDFGSATFDDEHHS-------------TIVSTRHYRAPERYMAS 186
CD+++ DFG A DE + V+TR YRAPE + S
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS 197
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 14/70 (20%)
Query: 254 CDIRLIDFGSATFDDEHH-------------STIVSTRHYRAPEVILELG-WAQPCDVWS 299
CD+++ DFG A DE + V+TR YRAPEV+L +++ DVWS
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 300 IGCIIFELYL 309
GCI+ EL+L
Sbjct: 209 CGCILAELFL 218
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +ML ++P++RI+ EAL HP+
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 13/49 (26%)
Query: 151 CDIRLIDFGSATFDDEH-------------HSTIVSTRHYRAPERYMAS 186
CD+++ DFG A DE + V+TR YRAPE + S
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTS 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++L DFG A + +V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 14/70 (20%)
Query: 254 CDIRLIDFGSATFDDEHH-------------STIVSTRHYRAPEVILELG-WAQPCDVWS 299
CD+++ DFG A DE + V+TR YRAPEV+L +++ DVWS
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 300 IGCIIFELYL 309
GCI+ EL+L
Sbjct: 209 CGCILAELFL 218
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +ML ++P++RI+ EAL HP+
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 13/49 (26%)
Query: 151 CDIRLIDFGSATFDDEH-------------HSTIVSTRHYRAPERYMAS 186
CD+++ DFG A DE + V+TR YRAPE + S
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTS 197
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVILELGWAQPC-DVWSIGCIIFELYLGIT 312
++L DFGSA E + +R YRAPE++L P D+WSIGC+ EL LG
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 313 LMARKT 318
L + +T
Sbjct: 241 LFSGET 246
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237
DL+ ++L YEP RI+ EA+ HPFFD L +S + ++
Sbjct: 299 IDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSN 341
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++L DFG A + +V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 151 VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++L DFG A + +V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 151 VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++L DFG A + +V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 151 VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I++IDFG A D++ T T HY APE++ + G+ + CD+WS+G I++ + G
Sbjct: 147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 254 CDIRLIDFGSA----TFDDEHH---STIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIF 305
C++++ DFG A T EH + V+TR YRAPE++L L + Q D+WS+GCI
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 306 EL 307
E+
Sbjct: 255 EM 256
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 192 RQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
RQ L+ +ML +EPS RIS + ALRHPF K
Sbjct: 319 RQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 98 LDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY--------NNXXXXXXXXXX 149
LD + +Q+I++ + P +L+ VR+ YQL+ + Y +
Sbjct: 138 LDLMESDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193
Query: 150 XCDIRLIDFGSA----TFDDEHH---STIVSTRHYRAPERYMASDDEEHRQLFDLIS 199
C++++ DFG A T EH + V+TR YRAPE ++ E+ Q DL S
Sbjct: 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWS 248
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 196 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFFDEL 343
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 196 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 294 LCSRLLEYTPTARLTPLEACAHSFFDEL 321
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 211
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 294 LCSRLLEYTPTARLTPLEACAHSFFDEL 321
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 211
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 181 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 301 LCSRLLEYTPTARLTPLEACAHSFFDEL 328
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 181 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 170 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 290 LCSRLLEYTPTARLTPLEACAHSFFDEL 317
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 170 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 199
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 196 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFFDEL 343
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 196 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGIT 312
++LIDFGSA E + + + +R+YRAPE+I + D+WS GC++ EL G
Sbjct: 181 LKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP 240
Query: 313 L 313
L
Sbjct: 241 L 241
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKL 224
DLIS++LEY PS R++ EAL HPFFD+L
Sbjct: 299 IDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 254 CDIRLIDFGSA----TFDDEHH---STIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIF 305
C++++ DFG A T EH + V+TR YRAPE++L L + Q D+WS+GCI
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 306 EL 307
E+
Sbjct: 256 EM 257
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 192 RQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
RQ L+ +ML +EPS RIS + ALRHPF K
Sbjct: 320 RQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 98 LDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY--------NNXXXXXXXXXX 149
LD + +Q+I++ + P +L+ VR+ YQL+ + Y +
Sbjct: 139 LDLMESDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 194
Query: 150 XCDIRLIDFGSA----TFDDEHH---STIVSTRHYRAPERYMASDDEEHRQLFDLIS 199
C++++ DFG A T EH + V+TR YRAPE ++ E+ Q DL S
Sbjct: 195 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWS 249
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 163 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 283 LCSRLLEYTPTARLTPLEACAHSFFDEL 310
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 163 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 200
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 166 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 286 LCSRLLEYTPTARLTPLEACAHSFFDEL 313
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 166 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 203
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD 199
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 190 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 310 LCSRLLEYTPTARLTPLEACAHSFFDEL 337
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 190 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 227
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 198 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 318 LCSRLLEYTPTARLTPLEACAHSFFDEL 345
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 198 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 241 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 361 LCSRLLEYTPTARLTPLEACAHSFFDEL 388
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 241 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 278
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 167 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 287 LCSRLLEYTPTARLTPLEACAHSFFDEL 314
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 167 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 204
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 200 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 320 LCSRLLEYTPTARLTPLEACAHSFFDEL 347
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 200 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 237
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 175 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 295 LCSRLLEYTPTARLTPLEACAHSFFDEL 322
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 175 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 212
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + + +R+YRAPE+I + DVWS GC++ EL LG
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 153 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPERYMASDD 188
++L DFGSA E + + + +R+YRAPE + D
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++L DFGSA E + + +R+YRAPE+I + D+WS+GCI E+ LG
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
++ ++ +DL+S +L+Y P ER+ EAL HP+FD+L
Sbjct: 286 KDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 256 IRLIDFG-SATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+++DFG SA F+++ + T +Y APEV L + + CDVWSIG I+F L G
Sbjct: 178 IKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAG 233
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPS 226
DLI +ML+++ RIS +AL HP+ ++ S
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I++ DFG AT E H T+ T +Y +PE+ DVWS+GC+ + L +G
Sbjct: 150 NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 57/201 (28%)
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY---- 137
L ++++ +++NY+ Y + ++ H Y K N P+S ++ RH +Q+I + Y
Sbjct: 74 LELYNYFEDSNYV-YLVLEMCHNGEMNRYLK-NRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 138 ----NNXXXXXXXXXXXCDIRLIDFGSAT---FDDEHHSTIVSTRHYRAPE--------- 181
+ +I++ DFG AT E H T+ T +Y +PE
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 182 -------------------------------RYMASDDEEHRQLF----DLISKMLEYEP 206
+ + +D E L DLI ++L P
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNP 251
Query: 207 SERISLSEALRHPFFDKLPSS 227
++R+SLS L HPF + S+
Sbjct: 252 ADRLSLSSVLDHPFMSRNSST 272
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++L DFG A D T V T +Y +PE + + + + D+WS+GC+++EL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKL 224
DLI+KMLE+ P RIS +ALRHP+F+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 255 DIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELY 308
DI + DF A D D + + V+ R YRAPE++++ G+ + D+WS GC++ E++
Sbjct: 172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A T+ T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKL 224
DLI+KMLE+ P RIS +ALRHP+F+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 255 DIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELY 308
DI + DF A D D + + V+ R YRAPE++++ G+ + D+WS GC++ E++
Sbjct: 172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT--FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
CDI++IDFG +T + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226
P+ SDD + DLI KML + PS RI+ ++ L HP+ K S
Sbjct: 244 PQWRTISDDAK-----DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A ++ V T Y +PE++ E ++ D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A T+ T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 166 IQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A T+ T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 201 IQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++L DFG A D++ V T +Y +PE + + + + D+WS+GC+++EL
Sbjct: 154 NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSATFDDEHHSTI--VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
CDI++IDFG +T ++ + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226
P+ SDD + DLI KML + PS RI+ ++ L HP+ K S
Sbjct: 244 PQWRTISDDAK-----DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSATFDDEHHSTI--VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
CDI++IDFG +T ++ + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226
P+ SDD + DLI KML + PS RI+ ++ L HP+ K S
Sbjct: 244 PQWRTISDDAK-----DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 256 IRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFEL 307
++L DFG+ DE H T V T Y +PEV+ G + + CD WS+G +FE+
Sbjct: 213 LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 308 YLGIT 312
+G T
Sbjct: 273 LVGDT 277
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A ++ V T Y +PE++ E + D+W++GCII++L G
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 311 I 311
+
Sbjct: 228 L 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A ++ V T Y +PE++ E + D+W++GCII++L G
Sbjct: 172 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 311 I 311
+
Sbjct: 232 L 232
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 259 IDFGSATFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
I+ + FDD+ + V+TR YRAPE++L + + D+WS+GCI+ E+ G
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 191 HRQLFDLISKMLEYEPSERISLSEALRHPF 220
+ + DL+ K+L++ P++RIS ++AL+HPF
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 169 IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 311 I 311
+
Sbjct: 229 L 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++L DFG A D V T +Y +PE + + + + D+WS+GC+++EL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG T + ST+V T ++ APEV+ + D+WS+G + E+ G
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG T + ST+V T ++ APEV+ + D+WS+G + E+ G
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 147 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 311 I 311
+
Sbjct: 207 L 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 146 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
Query: 311 I 311
+
Sbjct: 206 L 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 148 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
Query: 311 I 311
+
Sbjct: 208 L 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 311 I 311
+
Sbjct: 228 L 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 311 I 311
+
Sbjct: 229 L 229
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 311 I 311
+
Sbjct: 229 L 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 149 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
Query: 311 I 311
+
Sbjct: 209 L 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 311 I 311
+
Sbjct: 229 L 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 172 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 311 I 311
+
Sbjct: 232 L 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 311 I 311
+
Sbjct: 231 L 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
Query: 311 I 311
+
Sbjct: 213 L 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
Query: 311 I 311
+
Sbjct: 236 L 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A + V T Y +PE++ E + D+W++GCII++L G
Sbjct: 174 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
Query: 311 I 311
+
Sbjct: 234 L 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 175 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+E+ G
Sbjct: 167 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 255 DIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
D+ L+ F + V TR YRAPE+IL + + + DVWSIGCI EL
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
ER+ AS + L+ +ML + P++RI+++E L HPFF ++
Sbjct: 364 ERFPASSADA----IHLLKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 203 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 209 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 159 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+I+ G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + +H S T Y APEV+ G Q D WS G ++FE+ G
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 158 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 173 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 164 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 163 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 159 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 157 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 165 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + +H S T Y APEV+ G Q D WS G ++FE+ G
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + +H S T Y APEV+ G Q D WS G ++FE+ G
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
+R+ DFG A + +++ T ++ APEV+ G+ + CD+WS+G +++ + G T
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 313 LMA 315
A
Sbjct: 224 PFA 226
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF---DKLPSSVRVHAQTQ 235
DL+SKML +P +R++ + L+HP+ DKLP S H Q
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQ 303
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D++L DFG A T +T V T + APEVI + + D+WS+G EL G
Sbjct: 158 DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
IR+ DFG A + +++ T ++ APEV+ G+ CD+WS+G +++ + G T
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 313 LMA 315
A
Sbjct: 219 PFA 221
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF---FDKLP 225
DL+SKML +P +R++ + LRHP+ +D+LP
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLP 288
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+++DFG ++F D + T +Y APEV L+ + + CDVWS G I++ L G
Sbjct: 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y APE+IL G+ + D W++G +I+++ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y APE + ++ D+WS+G + EL +G
Sbjct: 153 EIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 152 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPERYMAS 186
+I+L DFG S D ++ V TR Y APER +
Sbjct: 153 EIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGT 188
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
+R+ DFG A + +++ T ++ APEV+ G+ + CD+WS+G +++ + G T
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 313 LMA 315
A
Sbjct: 224 PFA 226
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF---DKLPSSVRVHAQTQ 235
DL+SKML +P +R++ + L+HP+ DKLP S H Q
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQ 303
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++IDFG A DEH + T Y APEV + CD+WS G +++ L G
Sbjct: 166 IKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 26/80 (32%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTIVS------------------------TRHYRAPEVIL- 287
C +++ DFG A T + E + IV+ TR YRAPE+IL
Sbjct: 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225
Query: 288 ELGWAQPCDVWSIGCIIFEL 307
+ + + D+WS GCI EL
Sbjct: 226 QENYTKSIDIWSTGCIFAEL 245
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF 221
+L+ ML++ P++RI++ +AL HP+
Sbjct: 339 INLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 256 IRLIDFGSATFDDEH-HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314
I + DFG + + ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 148 IMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
Query: 315 ARKTKTKYF 323
+T++K F
Sbjct: 208 YEETESKLF 216
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFD 222
D I +LE +P+ER + +AL HP+ D
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT-FD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+IR+IDFG +T F+ + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 166 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI KML Y PS RIS +AL H +
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A E V T H+ APEV+ + +P DVW G I+F L G
Sbjct: 172 VKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +ML +P+ERI++ EAL HP+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG T + S +V T ++ APEV+ + D+WS+G + E+ G
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT-FD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+IR+IDFG +T F+ + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 189 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 246
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI KML Y PS RIS +AL H +
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT-FD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+IR+IDFG +T F+ + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 166 ANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI K L Y PS RIS +AL H +
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT-FD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+IR+IDFG +T F+ + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 190 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 247
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI KML Y PS RIS +AL H +
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG T + S +V T ++ APEV+ + D+WS+G + E+ G
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 254 CDIRLIDFGSAT-FD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+IR+IDFG +T F+ + + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 172 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 229
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLI KML Y PS RIS +AL H +
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEW 290
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG T + S +V T ++ APEV+ + D+WS+G + E+ G
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 256 IRLIDFGSATFDDEHHS---TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L D G F + ++V T +Y +PE I E G+ D+WS+GC+++E+
Sbjct: 175 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S DE + V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 146 EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 152 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPERYMAS 186
+I+L DFG S DE + V TR Y +PER +
Sbjct: 146 EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGT 181
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 49/80 (61%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 172 LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 225
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ R+ F+HG+ ++D+
Sbjct: 226 MIFRREP---FFHGQDNYDQ 242
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 165 DEHHSTIVSTRHYRAPERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFFD 222
D H + I+ + E ++ S++ + DL+ K+L Y+ +R++ EA+ HP+F
Sbjct: 267 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFY 326
Query: 223 KLPSSVRVHAQTQAD 237
+ V+ +Q AD
Sbjct: 327 PV---VKEQSQPSAD 338
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 223
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 224 MIFRKEP---FFHGHDNYDQ 240
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 49/80 (61%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 177 LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 230
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ R+ F+HG+ ++D+
Sbjct: 231 MIFRREP---FFHGQDNYDQ 247
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 165 DEHHSTIVSTRHYRAPERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
D H + I+ + E ++ S++ + DL+ K+L Y+ +R++ EA+ HP+F
Sbjct: 272 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 223
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 224 MIFRKEP---FFHGHDNYDQ 240
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T Y AP +IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 224
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 225 MIFRKEP---FFHGHDNYDQ 241
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 275 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 176 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 229
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 230 MIFRKEP---FFHGHDNYDQ 246
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 280 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312
+RLID+G A F + ++ V++R+++ PE++++ + D+WS+GC++ +
Sbjct: 169 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML------AS 222
Query: 313 LMARKTKTKYFYHGKLDWDE 332
++ RK F+HG ++D+
Sbjct: 223 MIFRKEP---FFHGHDNYDQ 239
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 175 RHYRAP-ERYMASDDEE--HRQLFDLISKMLEYEPSERISLSEALRHPFF 221
RH R ER++ S+++ + D + K+L Y+ R++ EA+ HP+F
Sbjct: 273 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 201 MLEYEPSERISLSEALRHPF--FDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIRL 258
+LE P + ++ LR D L S ++H +A + +++L
Sbjct: 115 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---------GEVKL 165
Query: 259 IDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
DFG A T +T V T + APEVI + + D+WS+G EL G
Sbjct: 166 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHSTIVS--TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 157 LKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 201 MLEYEPSERISLSEALRHPF--FDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIRL 258
+LE P + ++ LR D L S ++H +A + +++L
Sbjct: 95 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---------GEVKL 145
Query: 259 IDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
DFG A T +T V T + APEVI + + D+WS+G EL G
Sbjct: 146 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A H+S T T +Y APEV+ + + CD WS+G I + L G
Sbjct: 203 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 162 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 256 IRLIDFGSATFDDEHHS------TIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELY 308
+++ DFG A D H+S + T+ YR+P ++L + + D+W+ GCI E+
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
Query: 309 LGITLMA 315
G TL A
Sbjct: 220 TGKTLFA 226
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 192 RQLFDLISKMLEYEPSERISLSEALRHPFF 221
R+ D + ++L + P +R++ EAL HP+
Sbjct: 280 REAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 205 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 170 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++ DFG A + + + T Y APEV+ + + D WS G +I+E+ G T
Sbjct: 145 IKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++ L +G
Sbjct: 170 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
IR+ DFG A + + + T ++ APEV+ G+ CD+WS+G +++ G T
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 313 LMA 315
A
Sbjct: 219 PFA 221
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF---FDKLP 225
DL+SK L +P +R++ + LRHP+ +D+LP
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLP 288
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + T APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 343
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 344 ------EPPYFNEPPL------KAMKMIRDNLPP 365
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 164 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 221
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 222 ------EPPYFNEPPL------KAMKMIRDNLPP 243
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 266
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 267 ------EPPYFNEPPL------KAMKMIRDNLPP 288
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + + +V T ++ APEVI L + D+WS+G ++ E+ G
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++ L +G
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 166 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 223
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 224 ------EPPYFNEPPL------KAMKMIRDNLPP 245
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++ L +G
Sbjct: 146 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++ L +G
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 232 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 160 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 238 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 232 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 212
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 213 ------EPPYFNEPPL------KAMKMIRDNLPP 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 153 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 231 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 232 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCIIFELYLG 310
+++ DFG++ + T T Y APE+I + G+ + D+WS+GC I E+ G
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 255 DIRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIF 305
+++L DFG A T+D+E V T YR P+++L ++ D+W +GCI +
Sbjct: 138 ELKLADFGLARAKSIPTKTYDNE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY 192
Query: 306 ELYLGITLMARKT 318
E+ G L T
Sbjct: 193 EMATGRPLFPGST 205
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF-------DKLPSSVRVHA 232
DL++K+L++E RIS +A++HPFF KLP + + A
Sbjct: 260 DLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFA 303
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 256 IRLIDFGSA-TFDDEHHSTI--VSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGI 311
++L DFG A +F + + V TR YRAPE++ + D+W++GCI+ EL L +
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
Query: 312 TLM 314
+
Sbjct: 211 PFL 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
++L DFG + + +V T ++ APE+I L + D+WS+G ++ E+ G
Sbjct: 159 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-- 216
Query: 313 LMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKP 346
+ YF L A + +R+N P
Sbjct: 217 ------EPPYFNEPPL------KAMKMIRDNLPP 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI- 311
I L DFG + EH+ST + T Y APEV+ + + + D W +G +++E+ G+
Sbjct: 178 IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
Query: 312 TLMARKTKTKY 322
+R T Y
Sbjct: 238 PFYSRNTAEMY 248
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 275 VSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
V TR YRAPE+IL + + D+WS GCI EL
Sbjct: 217 VVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 192 RQLFDLISKMLEYEPSERISLSEALRHPFF 221
++ DL+ ML + +RI++ +AL HP+
Sbjct: 341 KEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 257 RLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+L DFG A T + ++ T + APEVI E+G+ D+WS+G E+ G
Sbjct: 165 KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L FG A E V T H+ APEV+ + +P DVW G I+F L G
Sbjct: 174 VKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+ +ML +P+ERI++ EAL HP+ +
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I + DFG + +D ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 314 MARKTKTKYF 323
+ K F
Sbjct: 218 FYDENDAKLF 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCIIFELYLG 310
+++ DFG++ + T T Y APE+I + G+ + D+WS+GC I E+ G
Sbjct: 148 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 293 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 371 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
+LI++ML P++RI+ EAL+HP+
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPW 263
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 275 VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
V T H+ APEV+ + +P DVW G I+F L G
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +ML +P+ERI++ EAL HP+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I + DFG + +D ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 314 MARKTKTKYF 323
+ K F
Sbjct: 218 FYDENDAKLF 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I + DFG + +D ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 314 MARKTKTKYF 323
+ K F
Sbjct: 218 FYDENDAKLF 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + +H S T Y APEV+ G + D WS G ++FE+ G
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
I S ++ PE + E + DL+ K+L +P R + EALRHP+
Sbjct: 357 ITSGKYNFIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I + DFG + +D ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 314 MARKTKTKYF 323
+ K F
Sbjct: 218 FYDENDAKLF 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 177 YRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS----VRVHA 232
+ P+ SD E +QL L ML YEPS+RIS EAL HP+ K S V HA
Sbjct: 224 FDPPDWTQVSD--EAKQLVKL---MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHA 278
Query: 233 QTQA 236
T A
Sbjct: 279 LTGA 282
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 256 IRLIDFG-SATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+++DFG SA F+ + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 146 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
Query: 314 MARKTKT---KYFYHGKLDWD 331
+T K GK +D
Sbjct: 205 FGGQTDQEILKRVEKGKFSFD 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 256 IRLIDFGSA-------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
++L DFG A + V T YR PE++L E + P D+W GCI+ E+
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 308 YLGITLMARKTK 319
+ +M T+
Sbjct: 224 WTRSPIMQGNTE 235
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF--DKLPSSVR 229
DLI K+L +P++RI +AL H FF D +PS ++
Sbjct: 290 LDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLK 326
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG + D +V T ++ APEVI +A D+WS+G ++ E+ G
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 153 IRLIDFGSATFDDEHHSTIVSTRHYR-APERYMASDDEEHRQLFDLISKMLEYEPSERIS 211
I ++D F D S + + + R +P + + + L D + +ML +P ER +
Sbjct: 232 IEMVDGEPPYFSD---SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT 288
Query: 212 LSEALRHPFF 221
E L HPF
Sbjct: 289 AQELLDHPFL 298
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 201 MLEYEPSERISLSEALRHPF--FDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIRL 258
+LE P + ++ LR D L S ++H +A + +++L
Sbjct: 95 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---------GEVKL 145
Query: 259 IDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
DFG A T + V T + APEVI + + D+WS+G EL G
Sbjct: 146 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 201 MLEYEPSERISLSEALRHPF--FDKLPSSVRVHAQTQADRIXXXXXXXXXXXXXXCDIRL 258
+LE P + ++ LR D L S ++H +A + +++L
Sbjct: 110 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---------GEVKL 160
Query: 259 IDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
DFG A T + V T + APEVI + + D+WS+G EL G
Sbjct: 161 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 256 IRLIDFGSA-------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
++L DFG A + V T YR PE++L E + P D+W GCI+ E+
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 308 YLGITLMARKTK 319
+ +M T+
Sbjct: 224 WTRSPIMQGNTE 235
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF--DKLPSSVRVHAQT 234
DLI K+L +P++RI +AL H FF D +PS ++ T
Sbjct: 290 LDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLST 331
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 256 IRLIDFGSA-------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
++L DFG A + V T YR PE++L E + P D+W GCI+ E+
Sbjct: 163 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Query: 308 YLGITLMARKTK 319
+ +M T+
Sbjct: 223 WTRSPIMQGNTE 234
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF--DKLPSSVRVHAQT 234
DLI K+L +P++RI +AL H FF D +PS ++ T
Sbjct: 289 LDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLST 330
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 258 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 143 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 307 L 307
+
Sbjct: 198 M 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 145 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 307 L 307
+
Sbjct: 200 M 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 259 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSATFDDEHHSTI---VSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A T V T YRAPE++L + + D+WS+GCI E+
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 23 VVALKIIK---NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
VVALK I+ E A EI+ L+++ PN VK+LD + + FE
Sbjct: 32 VVALKKIRLDTETEGVPSTAIREISLLKELNH--PN----IVKLLDVIHTENKLYLVFEF 85
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLI 109
L + + DF+ + L ++ +QL+
Sbjct: 86 LSMDLKDFMDASALTGIPLPLIKSYLFQLL 115
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 141 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 307 L 307
+
Sbjct: 196 M 196
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L+S+ML Y+P++RIS AL HPFF + V
Sbjct: 258 DEDGR---SLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 143 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 256 IRLIDFG-SATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+++DFG SA F+ + T +Y APEV L + + CDVWS G I++ L G
Sbjct: 163 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 221
Query: 314 MARKTKT---KYFYHGKLDWD 331
+T K GK +D
Sbjct: 222 FGGQTDQEILKRVEKGKFSFD 242
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALR 217
FG T D E + + P + DE + L+ ML YEPS+RIS EAL
Sbjct: 222 FGGQT-DQEILKRVEKGKFSFDPPDWTQVSDEAKQ----LVKLMLTYEPSKRISAEEALN 276
Query: 218 HPFFDKLPS 226
HP+ K S
Sbjct: 277 HPWIVKFCS 285
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 256 IRLIDFGSA-------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
++L DFG A + V T YR PE++L E + P D+W GCI+ E+
Sbjct: 164 LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 308 YLGITLMARKTK 319
+ +M T+
Sbjct: 224 WTRSPIMQGNTE 235
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFF--DKLPSSVRVHAQT 234
DLI K+L +P++RI +AL H FF D +PS ++ T
Sbjct: 290 LDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLST 331
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 142 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 307 L 307
+
Sbjct: 197 M 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L+S+ML Y+P++RIS AL HPFF + V
Sbjct: 258 DEDGR---SLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 143 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 307 L 307
+
Sbjct: 198 M 198
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFEL 307
++L DFG+ ++ T V T Y +PEV+ G + + CD WS+G ++E+
Sbjct: 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 308 YLGIT 312
+G T
Sbjct: 267 LVGDT 271
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 142 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 307 L 307
+
Sbjct: 197 M 197
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 145 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 307 L 307
+
Sbjct: 200 M 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 145 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 307 L 307
+
Sbjct: 200 M 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 261 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 146 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 200
Query: 307 L 307
+
Sbjct: 201 M 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L+S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGR---SLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 145 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 307 L 307
+
Sbjct: 200 M 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 258 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 143 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 307 L 307
+
Sbjct: 198 M 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSATFDDEHHSTI---VSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A T V T YRAPE++L + + D+WS+GCI E+
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 23 VVALKIIK---NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
VVALK I+ E A EI+ L+++ PN VK+LD + + FE
Sbjct: 33 VVALKKIRLDTETEGVPSTAIREISLLKELNH--PN----IVKLLDVIHTENKLYLVFEF 86
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLI 109
L + + DF+ + L ++ +QL+
Sbjct: 87 LSMDLKDFMDASALTGIPLPLIKSYLFQLL 116
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L+S+ML Y+P++RIS AL HPFF + V
Sbjct: 259 DEDGR---SLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 144 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 307 L 307
+
Sbjct: 199 M 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 141 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 307 L 307
+
Sbjct: 196 M 196
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 258 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 143 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 307 L 307
+
Sbjct: 198 M 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFEL 307
++L DFG+ ++ T V T Y +PEV+ G + + CD WS+G ++E+
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 308 YLGIT 312
+G T
Sbjct: 272 LVGDT 276
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 256 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 142 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 307 L 307
+
Sbjct: 197 M 197
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 259 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 144 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 307 L 307
+
Sbjct: 199 M 199
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 256 IRLIDFGSATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A ++ T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 151 LKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 260 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSATFDDEHHSTI---VSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A T V T YRAPE++L + + D+WS+GCI E+
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 142 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 307 L 307
+
Sbjct: 197 M 197
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 256 IRLIDFGSATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A ++ T T +Y APEV+ + + CD+WS+G I++ L G
Sbjct: 170 LKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 259 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 144 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 307 L 307
+
Sbjct: 199 M 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 264 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 264 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DE+ R L +S+ML Y+P++RIS AL HPFF + V
Sbjct: 261 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
I+L DFG A ++ V T YRAPE++L + + D+WS+GCI E+
Sbjct: 146 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
D++L DFG A T + V T + APEVI + + D+WS+G EL G
Sbjct: 154 DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFEL 307
++L DFG+ ++ T V T Y +PEV+ G + + CD WS+G ++E+
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 308 YLGIT 312
+G T
Sbjct: 272 LVGDT 276
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++ DFG D + T Y APE++L + D WS G +++E+ +G +
Sbjct: 157 IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
Query: 313 LMARKTKTKYFYHGKLD------WDEKGTAGRYVR 341
+ + + F+ ++D W EK V+
Sbjct: 217 PFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK 251
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++ DFG D + T Y APE++L + D WS G +++E+ +G +
Sbjct: 158 IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
Query: 313 LMARKTKTKYFYHGKLD 329
+ + + F+ ++D
Sbjct: 218 PFHGQDEEELFHSIRMD 234
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
DE+ R L +S+ML Y+P++RIS AL HPFF
Sbjct: 257 DEDGRSL---LSQMLHYDPNKRISAKAALAHPFF 287
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
I+L DFG A T+ E V T YRAPE++L + + D+WS+GCI E
Sbjct: 142 IKLADFGLARAFGVPVRTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 307 L 307
+
Sbjct: 197 M 197
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
D+ + DLIS++L+ +P R++ +AL+HPFF++
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVI------LELGWAQPCDVWSIGCIIFEL 307
IRL DFG + E + T Y APE++ G+ + D+W+ G I+F L
Sbjct: 239 IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 308 YLGIT--------LMARKTKTKYFYHGKLDWDEKGTA 336
G LM R + +WD++ +
Sbjct: 299 LAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST 335
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 256 IRLIDFGSATFDDEHHSTI--VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT- 312
IR+ D G A E + V T Y APEV+ + D W++GC+++E+ G +
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Query: 313 LMARKTKTK 321
RK K K
Sbjct: 385 FQQRKKKIK 393
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 256 IRLIDFGSATFDDEHHSTI--VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT- 312
IR+ D G A E + V T Y APEV+ + D W++GC+++E+ G +
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Query: 313 LMARKTKTK 321
RK K K
Sbjct: 385 FQQRKKKIK 393
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 256 IRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I + DFG + + + ST T Y APEV+ + +++ D WSIG I + L G
Sbjct: 162 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
Query: 314 MARKTKTKYF 323
+ +K F
Sbjct: 222 FYDENDSKLF 231
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG A ++ V T YRAP+V++ ++ D+WSIGCI E+ G
Sbjct: 158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 312 TLMARKT 318
L T
Sbjct: 218 PLFPGVT 224
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DL+S ML ++P++RIS +A+ HP+F L +
Sbjct: 278 IDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQI 311
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG A ++ V T YRAP+V++ ++ D+WSIGCI E+ G
Sbjct: 158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 312 TLMARKT 318
L T
Sbjct: 218 PLFPGVT 224
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230
DL+S ML ++P++RIS +A+ HP+F L + +
Sbjct: 278 IDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQIMI 313
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG + D T T Y APE+++ G + D WS+G +++++ G
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI+KML P++RI+ SEAL+HP+
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWI 264
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 257 RLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLG 310
+LIDFGS A DE ++ TR Y PE I + A P VWS+G +++++ G
Sbjct: 180 KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI+KML P++RI+ SEAL+HP+
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWI 264
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A D + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI+KML PS+RI+ +EAL+HP+
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT-FDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A + E + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 152 VKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLI+KML PS+RI+ +EAL+HP+
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWI 282
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT-FDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A + E + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 163 VKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 256 IRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFE 306
++L DFG A TF E V T YRAP+V++ ++ D+WS GCI+ E
Sbjct: 147 LKLGDFGLARAFGIPVNTFSSE-----VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE 201
Query: 307 LYLGITL 313
+ G L
Sbjct: 202 MITGKPL 208
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 194 LFDLISKMLEYEPSERISLSEALRHPFF 221
L D + +L+ P R+S +AL HP+F
Sbjct: 270 LMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 147 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 270 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 325
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 271 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 326
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 291 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 270 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 325
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 324
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 175 RHYRAPERYMASDDEEH---RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
RH R P + D +H + D + K+L Y+ ER++ EA+ HP+F ++ ++
Sbjct: 290 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAA 345
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG A ++ V T YRAP+V++ ++ D+WS+GCI E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 311 ITL 313
L
Sbjct: 198 TPL 200
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E ++ DE DL+SKML+ +P++RI+ +AL H +F
Sbjct: 247 ESFLKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 256 IRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L DFG A + E + T +Y +PE+ + D+W++GC+++EL
Sbjct: 164 VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 256 IRLIDFGSA-TFDDE---HHSTIVSTRHYRAPEVI--LELG---WAQPCDVWSIGCIIFE 306
IRL DFGS +D+ S V T Y +PE++ +E G + CD WS+G ++E
Sbjct: 230 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 307 LYLGIT 312
+ G T
Sbjct: 290 MLYGET 295
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSAT-FDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG A E + T Y +PEV+ + + +P D+W+ G I++ L +G
Sbjct: 172 VKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S++ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 159 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S++ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG A ++ V T YRAP+V++ ++ D+WS+GCI E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 311 ITL 313
L
Sbjct: 198 APL 200
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E ++ DE DL+SKML+ +P++RI+ +AL H +F
Sbjct: 247 ESFLKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A D I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
TK
Sbjct: 218 FLGDTK 223
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
D I K+L E +R+++ EALRHP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S++ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 143 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 199
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S++ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 144 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 200
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 256 IRLIDFGSA-TFDDE---HHSTIVSTRHYRAPEVI--LELG---WAQPCDVWSIGCIIFE 306
IRL DFGS +D+ S V T Y +PE++ +E G + CD WS+G ++E
Sbjct: 214 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 307 LYLGIT 312
+ G T
Sbjct: 274 MLYGET 279
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S++ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 150 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 156 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 313 LMARKTK 319
TK
Sbjct: 215 PFLGDTK 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 156 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 313 LMARKTK 319
TK
Sbjct: 215 PFLGDTK 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 187 DDEEHRQLFD----LISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238
+DEE + + + ISK+L E S RIS SEAL+HP+ R+ AQ + +R
Sbjct: 308 EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNR 363
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A E T + APEV+ + P D+WS+G I + L G++
Sbjct: 228 IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG A ++ + T YRAP+V++ ++ D+WS+GCI E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 311 ITL 313
L
Sbjct: 198 TPL 200
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
E ++ DE DL+SKML+ +P++RI+ +AL H +F
Sbjct: 247 ESFLKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 256 IRLIDFGSATFDDE----HHSTIVSTRHYRAPEVI--LELG---WAQPCDVWSIGCIIFE 306
IRL DFGS E S V T Y +PE++ +E G + CD WS+G ++E
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 307 LYLGIT 312
+ G T
Sbjct: 274 MLYGET 279
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY-LG 310
+++ DFG + + DDE S++ S R PEV++ ++ D+W+ G +++E+Y LG
Sbjct: 159 VKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 311 ITLMARKTKTKYFYH 325
R T ++ H
Sbjct: 219 KMPYERFTNSETAEH 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 256 IRLIDFG-SATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++LIDFG +A F + T V T +Y +P+V LE + CD WS G +++ L G
Sbjct: 165 LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 256 IRLIDFGSATFDDEHHSTIV----STRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG + H T+ T Y APE+++ G + D WS+G +++++ G
Sbjct: 160 VKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
Query: 312 TLMARKTKTK 321
+ + K
Sbjct: 219 PPFTGENRKK 228
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 256 IRLIDFG-SATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++LIDFG +A F + T V T +Y +P+V LE + CD WS G +++ L G
Sbjct: 148 LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 22/72 (30%)
Query: 256 IRLIDFGSAT----FDD-----------EHHSTIVSTRHYRAPEVI-----LELGWAQPC 295
I+L DFGSAT + D E T +T YR PE+I +G Q
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ-- 234
Query: 296 DVWSIGCIIFEL 307
D+W++GCI++ L
Sbjct: 235 DIWALGCILYLL 246
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERI 210
C + L+ F F+D IV+ ++ P D ++ LI ML+ P ER+
Sbjct: 241 CILYLLCFRQHPFEDGAKLRIVNGKYSIPPH------DTQYTVFHSLIRAMLQVNPEERL 294
Query: 211 SLSEAL 216
S++E +
Sbjct: 295 SIAEVV 300
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A I T + APE++ D+WSIG I + L G +
Sbjct: 172 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
Query: 314 MARKTK 319
+TK
Sbjct: 232 FLGETK 237
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A I T + APE++ D+WSIG I + L G +
Sbjct: 158 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 314 MARKTK 319
+TK
Sbjct: 218 FLGETK 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312
I++IDFG A F +E + I T + APE++ D+WSIG I + L G +
Sbjct: 157 IKIIDFGLAHKIDFGNEFKN-IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 313 LMARKTK 319
TK
Sbjct: 216 PFLGDTK 222
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
I+LIDFG A I T + APE++ D+WSIG I + L G +
Sbjct: 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
Query: 314 MARKTK 319
+TK
Sbjct: 211 FLGETK 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 256 IRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFEL 307
I+LIDFGSA + + T T Y APEV++ + P ++WS+G ++ L
Sbjct: 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 274 IVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFEL 307
+V T YRAPE++L + + D+W+IGCI EL
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 193 QLFDLISKMLEYEPSERISLSEALRHPFF--DKLPSS 227
+ F L+ K+L +P +RI+ +A++ P+F D LP+S
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTS 345
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ DFG+A H + + + APEV +++ CDV+S G I++E+
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 256 IRLIDFGSA-TFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+R+ D G A F + V T Y APEV+ + + + D +S+GC++F+L G +
Sbjct: 331 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 314 MARKTKTK 321
R+ KTK
Sbjct: 391 F-RQHKTK 397
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ DFG+A H + + + APEV +++ CDV+S G I++E+
Sbjct: 146 LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 256 IRLIDFGSA-TFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+R+ D G A F + V T Y APEV+ + + + D +S+GC++F+L G +
Sbjct: 330 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
Query: 314 MARKTKTK 321
R+ KTK
Sbjct: 390 F-RQHKTK 396
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 253 LGCILYYMTYGKT 265
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXX 248
E + LFD I+ ER +L E L FF ++ +VR H
Sbjct: 92 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVR-HCHNXGVLHRDIKDENIL 142
Query: 249 XXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
+++LIDFGS A D ++ TR Y PE I + + VWS+G ++++
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 307 LYLG 310
+ G
Sbjct: 203 MVCG 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 150 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 148 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 149 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 256 IRLIDFGSAT-FDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+R+ D G A F + V T Y APEV+ + + + D +S+GC++F+L G +
Sbjct: 331 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 314 MARKTKTK 321
R+ KTK
Sbjct: 391 F-RQHKTK 397
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 256 IRLIDFGSAT-FDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313
+R+ D G A F + V T Y APEV+ + + + D +S+GC++F+L G +
Sbjct: 331 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 314 MARKTKTK 321
R+ KTK
Sbjct: 391 F-RQHKTK 397
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 206 LGCILYYMTYGKT 218
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
P + D + L D++ L+ +P +RIS+ E L HP+
Sbjct: 236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 149 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 257 RLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+L DFG + +T T Y APE++ E+ + D W++G +++E+ G
Sbjct: 164 KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 253 LGCILYYMTYGKT 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + ST T +Y APE++ + D W++G ++FE+ G
Sbjct: 192 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 225 LGCILYYMTYGKT 237
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
P + D + L D++ L+ +P +RIS+ E L HP+
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 149 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 208
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 209 LGCILYYMTYGKT 221
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
P + D + L D++ L+ +P +RIS+ E L HP+
Sbjct: 239 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V T +Y PE I ++ ++ DVWS
Sbjct: 145 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 204
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 205 LGCILYYMTYGKT 217
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221
P + D + L D++ L+ +P +RIS+ E L HP+
Sbjct: 235 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 256 IRLIDFGSATFDDE---------------HHSTIVSTRHYRAPEVILELGWAQPCDVWSI 300
+++ DFG T D+ H+ V T+ Y +PE I ++ D++S+
Sbjct: 157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSL 216
Query: 301 GCIIFELYLGITLMARKTKT 320
G I+FEL + + +T
Sbjct: 217 GLILFELLYPFSTQMERVRT 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 139 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 191 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 243 LGILLYDMVCG 253
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRH---YRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+++ DFG A + H +T +S + APEVI +++ DVWS G +++EL G
Sbjct: 155 LKITDFGLAR--EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSXQEYS---DWKEKKT 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 97 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 149 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 201 LGILLYDMVCG 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + + DDE+ S+ S R PEV++ ++ D+W+ G +++E+Y
Sbjct: 144 VKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 200
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 124 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 176 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 228 LGILLYDMVCG 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXX 248
E + LFD I+ ER +L E L FF ++ +VR H
Sbjct: 92 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVR-HCHNCGVLHRDIKDENIL 142
Query: 249 XXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
+++LIDFGS A D ++ TR Y PE I + + VWS+G ++++
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 307 LYLG 310
+ G
Sbjct: 203 MVCG 206
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 124 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 176 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 228 LGILLYDMVCG 238
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 255 DIRLIDFG-SATF----DDEHH--STIVSTRHYRAPEVI--LELGWAQPCDVWSIGCIIF 305
+I+L+DFG S F + E++ +T T ++ APEV+ + CD WS G ++
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 306 ELYLG 310
L +G
Sbjct: 268 LLLMG 272
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 125 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 177 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 229 LGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 124 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 176 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 228 LGILLYDMVCG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 97 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 149 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 201 LGILLYDMVCG 211
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 139 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 191 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 243 LGILLYDMVCG 253
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 96 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 148 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 199
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 200 LGILLYDMVCG 210
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 119 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 170
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 171 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 222
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 223 LGILLYDMVCG 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXX 248
E + LFD I+ ER +L E L FF ++ +VR H
Sbjct: 144 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVR-HCHNCGVLHRDIKDENIL 194
Query: 249 XXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
+++LIDFGS A D ++ TR Y PE I + + VWS+G ++++
Sbjct: 195 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 254
Query: 307 LYLG 310
+ G
Sbjct: 255 MVCG 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXX 248
E + LFD I+ ER +L E L FF ++ +VR H
Sbjct: 95 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVR-HCHNCGVLHRDIKDENIL 145
Query: 249 XXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
+++LIDFGS A D ++ TR Y PE I + + VWS+G ++++
Sbjct: 146 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 205
Query: 307 LYLG 310
+ G
Sbjct: 206 MVCG 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 111 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 163 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 215 LGILLYDMVCG 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIXXXXXXXXX 248
E + LFD I+ ER +L E L FF ++ +VR H
Sbjct: 92 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVR-HCHNCGVLHRDIKDENIL 142
Query: 249 XXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306
+++LIDFGS A D ++ TR Y PE I + + VWS+G ++++
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202
Query: 307 LYLG 310
+ G
Sbjct: 203 MVCG 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 125 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 177 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 229 LGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 125 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 177 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 229 LGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 124 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 176 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 228 LGILLYDMVCG 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 256 IRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+++ DFG + EH T+ T Y APE++ + D+WS+G I + L G
Sbjct: 190 LKIADFGLSKIV-EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
DE DL+ K++ +P +R++ +AL+HP+
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 125 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 177 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 229 LGILLYDMVCG 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 111 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 163 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 215 LGILLYDMVCG 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 97 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 149 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 201 LGILLYDMVCG 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 112 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 164 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 216 LGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 112 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 164 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 216 LGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 139 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 191 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 243 LGILLYDMVCG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 131 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 183 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 235 LGILLYDMVCG 245
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 112 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 164 DLNRG--------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 216 LGILLYDMVCG 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------VHAQTQADRIXX 241
E + LFD I+ ER +L E L FF ++ +VR +H + + I
Sbjct: 96 EPVQDLFDFIT--------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
Query: 242 XXXXXXXXXXXXCDIRLIDFGS-ATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWS 299
+++LIDFGS A D ++ TR Y PE I + + VWS
Sbjct: 148 DLNR--------GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 199
Query: 300 IGCIIFELYLG 310
+G +++++ G
Sbjct: 200 LGILLYDMVCG 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 256 IRLIDFG----SATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLG 310
++LIDFG D H T + Y APE+I + DVWS+G +++ L G
Sbjct: 147 LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 197 LISKMLEYEPSERISLSEALRHPFF 221
L+ +ML+ +P +RIS+ L HP+
Sbjct: 240 LLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 257 RLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++ID G A D+ + V T Y APE++ + + D WS G + FE G
Sbjct: 165 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 257 RLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++ DFG T + APE + E ++ DVWS G +++E+Y
Sbjct: 148 KVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIY 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 257 RLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++ID G A D+ + V T Y APE++ + + D WS G + FE G
Sbjct: 164 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 194 LFDLISKMLEYEPSERISLSEALRHPFFDK 223
L DL+ MLEYEP++R S+ + +H +F K
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRH------YRAPEVILELGWAQPCDVWSIGCIIFELYL 309
I++ DFG EH V+TR Y APE+I + + D W+ G +++E+
Sbjct: 159 IKIADFGMCK---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
Query: 310 G 310
G
Sbjct: 216 G 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+S+ L +P +R + EAL HPFF +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+S+ L +P +R + EAL HPFF +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+S+ L +P +R + EAL HPFF +
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +L+ P +RIS EAL+HP+F
Sbjct: 261 DLLQNLLKCNPVQRISAEEALQHPYF 286
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFEL 307
+++L +FG A +S V T YR P+V+ ++ D+WS GCI EL
Sbjct: 139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DL+ +L+ P +RIS EAL+HP+F
Sbjct: 261 DLLQNLLKCNPVQRISAEEALQHPYF 286
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFEL 307
+++L DFG A +S V T YR P+V+ ++ D+WS GCI EL
Sbjct: 139 ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG +D T Y APE+I + + D W+ G +++E+ G
Sbjct: 160 IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 163 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS++L++ PS+R L E L HP+
Sbjct: 252 DLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 310 G 310
G
Sbjct: 215 G 215
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +V T +Y PE I ++ ++ DVWS
Sbjct: 165 LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 225 LGCILYYMTYGKT 237
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 180 PERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
P + D + L D++ L+ +P +RIS+ E L HP+
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+I++ DFG + TF ++ T + Y APE+ + P DVWS+G I++ L G
Sbjct: 151 NIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+I++ DFG + TF ++ T + Y APE+ + P DVWS+G I++ L G
Sbjct: 151 NIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 16/73 (21%)
Query: 256 IRLIDFGSATFDDEHHSTIV-----STRHYRAPEVILELGWAQP-----------CDVWS 299
++LIDFG A +++V +Y PE I ++ ++ DVWS
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 300 IGCIIFELYLGIT 312
+GCI++ + G T
Sbjct: 253 LGCILYYMTYGKT 265
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+I++ DFG + TF ++ T + Y APE+ + P DVWS+G I++ L G
Sbjct: 151 NIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 172 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS++L++ PS+R L E L HP+
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG +D T Y APE+I + + D W+ G +++E+ G
Sbjct: 481 IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G+
Sbjct: 150 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ S+R++L+E L HP+
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 258 LIDFG--SATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
L+DFG SAT D++ V T +Y APE E D++++ C+++E G
Sbjct: 175 LVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 200
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 201 AGELPWDQPSDSCQEYS---DWKEKKT 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L + PSER+ L++ HP+
Sbjct: 250 DLISKLLRHNPSERLPLAQVSAHPW 274
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 258 LIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+ DFG S T+ T Y PE+I + D+W IG + +EL +G
Sbjct: 164 IADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+I++ DFG + TF ++ T + Y APE+ + P DVWS+G I++ L G
Sbjct: 144 NIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 240 DLISRLLKHNPSQRPXLREVLEHPW 264
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE I + D+WS+G + +E +G
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 257 RLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++ DFG T + APE + E ++ DVWS G +++E+Y
Sbjct: 142 KVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 257 RLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++ DFG T + APE + E ++ DVWS G +++E+Y
Sbjct: 157 KVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 145 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 201
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 234 DLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239
+LI KM+ +P +R S L+HPFF L ++ Q +DRI
Sbjct: 262 ELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFF-QDVSDRI 304
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 203 AGELPWDQPSDSCQEYS---DWKEKKT 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 257 RLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
++ DFG T + APE + E ++ DVWS G +++E+Y
Sbjct: 329 KVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 310 G 310
G
Sbjct: 215 G 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 310 G 310
G
Sbjct: 215 G 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 150 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 239 DLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 255 DIRLIDFGSAT---FDDEHH--STIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELY 308
++++ DFG AT +++ + + T Y APE++ + A+P DVWS G ++ +
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
Query: 309 LGITLMARKTKTKYFYHGKLDWDEKGT 335
G + + + Y DW EK T
Sbjct: 202 AGELPWDQPSDSCQEYS---DWKEKKT 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 310 G 310
G
Sbjct: 215 G 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + S T +Y APE++ + D W++G ++FE+ G
Sbjct: 160 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 310 G 310
G
Sbjct: 215 G 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 143 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 199
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 232 DLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ S+R++L+E L HP+
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPW 263
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
++++ DFG S T+ T Y PE+I + D+WS+G + +E +G+
Sbjct: 150 ELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 256 IRLIDFGSA-TFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309
++++DFG A D +S ++ T Y +PE DV+S+GC+++E+
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 310 G 310
G
Sbjct: 232 G 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 147 ELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPW 261
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ +FG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 148 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + S T +Y APE++ + D W++G ++FE+ G
Sbjct: 145 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPW 264
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 151 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVST--RHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG + DD++ S++ + + APEV ++ DVW+ G +++E++
Sbjct: 143 VKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ +FG S +T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + S T +Y APE++ + D W++G ++FE+ G
Sbjct: 149 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPW 260
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S T+ T Y PE+I + D+WS+G + +E +G
Sbjct: 147 ELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPW 260
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 147 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPW 262
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 149 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPW 261
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 148 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPW 259
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 146 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLIS++L++ PS+R L E L HP+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPW 264
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 151 ELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS+M++++P +R + + LRHP F
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS+M++++P +R + + LRHP F
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS++L++ PS+R L E L HP+
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWI 286
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + T Y PE+I + D+WS+G + +E +G
Sbjct: 172 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS+M++++P +R + + LRHP F
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS+M++++P +R + + LRHP F
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 256 IRLIDFG--SATFDDEHHSTI-------------VSTRHYRAPEVILELGWAQPCDVWSI 300
+++ DFG +A DE T+ V T+ Y +PE I ++ D++S+
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 301 GCIIFELYLGITLMARKTK 319
G I+FEL + + +
Sbjct: 263 GLILFELLYSFSTQMERVR 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 255 DIRLIDFG--SATFDDEHHSTIVSTRHYRAPEVI----LELGWAQPCDVWSIGCIIFELY 308
+I+L DFG D + R Y APE I G+ DVWS+G ++EL
Sbjct: 164 NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 309 LG 310
G
Sbjct: 224 TG 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L Y P +R+ L + HP+
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L Y P +R+ L + HP+
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L Y P +R+ L + HP+
Sbjct: 242 DLISKLLRYHPPQRLPLKGVMEHPW 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELF 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 255 DIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELY 308
+I++ DFG F +E T + Y APE+ + P DVWS+G I++ L
Sbjct: 152 NIKIADFG---FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 309 LG 310
G
Sbjct: 209 SG 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELF 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATFD-DEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F D+ +++ T+ + +PEV ++ DVWS G +++E++
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 282 APEVILELGWAQPCDVWSIGCIIFELY 308
APE + E ++ DVWS G +++EL+
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVST--RHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F DD++ S+ + + +PEV ++ DVWS G +++E++
Sbjct: 162 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATFD-DEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F D+ +++ T+ + +PEV ++ DVWS G +++E++
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATFD-DEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F D+ +++ T+ + +PEV ++ DVWS G +++E++
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 255 DIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELY 308
+I++ DFG F +E T + Y APE+ + P DVWS+G I++ L
Sbjct: 149 NIKIADFG---FSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 205
Query: 309 LG 310
G
Sbjct: 206 SG 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATFD-DEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F D+ +++ T+ + +PEV ++ DVWS G +++E++
Sbjct: 143 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSATF--DDEHHSTIVST--RHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
I++ DFG F DD++ S+ + + +PEV ++ DVWS G +++E++
Sbjct: 145 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 256 IRLIDFGSATFDDEHHST----IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+++ DFG A E T ++ T Y +PE + D++SIG +++E+ +G
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVI-LEL---GWAQPCDVWSIGCIIFELYL 309
+++ DFG + + DD + Y APE I EL G++ D+WS+G + EL +
Sbjct: 149 VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI 208
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 158 FGSATFDDEH----HSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLS 213
FG F DE HS I S + P++ ++D L DLI++ML+ P RI +
Sbjct: 235 FGQCPFMDERIMCLHSKIKS-QALEFPDQPDIAED-----LKDLITRMLDKNPESRIVVP 288
Query: 214 EALRHPFFDK 223
E HP+ +
Sbjct: 289 EIKLHPWVTR 298
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 199 SKMLEYEPSERISLSEALRHPFF 221
+ MLE +P +RIS AL HP+F
Sbjct: 300 TAMLEMDPVKRISAKNALEHPYF 322
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 275 VSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGITL 313
+ T YR PE++L ++ D+WSI CI E+ + L
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY-L 309
+++ DFG A D ++ + R + APE + E + DVWS G +++E++ L
Sbjct: 211 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270
Query: 310 GIT 312
G+
Sbjct: 271 GVN 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 267 DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHG 326
D + T+V ++ APE+I + + DV+S G ++ E ++ R +
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE------IIGRVNADPDYLPR 228
Query: 327 KLDW--DEKGTAGRYVRENCKP 346
+D+ + +G RY NC P
Sbjct: 229 TMDFGLNVRGFLDRYCPPNCPP 250
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
I++I+FG A ++ + + Y APEV + D+WS+G +++ L GI
Sbjct: 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFD-KLPSSVRVHAQTQA 236
LI +M+ +P +RI++ E R P+F+ LP +R + Q
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQG 278
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 272 STIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYLG 310
+T+ T+ Y APE+ G++ D WS+G +EL G
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 256 IRLIDFGSAT---FDDEHHSTI-VSTRHYRAPEVILELGWAQ-------PCDVWSIGCII 304
IRL DFGS D S + V T Y +PE++ +G CD W++G
Sbjct: 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260
Query: 305 FELYLGIT 312
+E++ G T
Sbjct: 261 YEMFYGQT 268
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
CD L ++TF + T + APEV+ + + DV+S G I++EL
Sbjct: 181 CDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+R+ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 183 VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + + + TR + APE I + ++ DVWS G +++E++
Sbjct: 238 VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 189 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 257 RLIDFG-SATFDDEHHSTIVSTR-----HYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++ DFG S +D+ +T ++ + APE I + DVWS G +++E+
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 230 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 232 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 183 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 239 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 296
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 237 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 294
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 189 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 182 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 181 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 230 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 287
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 174 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 178 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 189 MKIADFGLAR--DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 256 IRLIDFGSATFDDEHH----STIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A D HH + R + APE + + + DVWS G +++E++
Sbjct: 189 MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D + R + APE I + + DVWS G +++E++
Sbjct: 189 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 246
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
D I +L+ EP +R+++ +AL HP+
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 256 IRLIDFGSATFDDEHHSTIV------STRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ DFG A E H S + APE + E + DVWS G ++EL
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 172 VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
+ Y P++ A E + DLISK+L + +R+S ++ L+HP+
Sbjct: 253 IQEGKYEFPDKDWAHISSEAK---DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 183 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDK 223
+IS L+ +P +R + +E LRH FF K
Sbjct: 262 MISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 185 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L + +R+S ++ L+HP+
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 188 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPF 220
DLISK+L + +R+S ++ L+HP+
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 197 LISKMLEYEPSERISLSEALRHPFFDK 223
+IS L+ +P +R + +E LRH FF K
Sbjct: 267 MISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 256 IRLIDFG-SATF---DDEHHSTIVSTRHYRAPEVIL--ELGWAQPCDVWSIGCIIFELYL 309
+ L DFG S F + E T Y AP+++ + G + D WS+G +++EL
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 310 GIT 312
G +
Sbjct: 258 GAS 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + +++ + R + APE + + + DVWS G +++E++
Sbjct: 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 280 YRAPEVILELGWAQPCDVWSIGCIIFELY 308
+ APE I + + DVWS G +++E++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTR---HYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG A + D R + APE I + + DVWS G +++E++
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1W63|A Chain A, Ap1 Clathrin Adaptor Core
pdb|1W63|C Chain C, Ap1 Clathrin Adaptor Core
pdb|1W63|E Chain E, Ap1 Clathrin Adaptor Core
pdb|1W63|G Chain G, Ap1 Clathrin Adaptor Core
pdb|1W63|I Chain I, Ap1 Clathrin Adaptor Core
pdb|1W63|K Chain K, Ap1 Clathrin Adaptor Core
Length = 618
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY--REAARLEINALQKIGE 51
+C+L C+ S+ +C ++ EV+ K++K Y ++AA ++ ++K+ E
Sbjct: 128 LCTLGCMGSSEMCRDLAGEVE-----KLLKTSNSYLRKKAALCAVHVIRKVPE 175
>pdb|2BZG|A Chain A, Crystal Structure Of Thiopurine S-Methyltransferase
Length = 232
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 59 LCVKMLD--WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENN 115
LC K ++ WF GH + EI L + +F E N L YS + + + ++ +
Sbjct: 56 LCGKAVEXKWFADRGHSVVGVEISELGIQEFFTEQN-LSYSEEPITEIPGTKVFKSSSG 113
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 280 YRAPEVILELGWAQPCDVWSIGCIIFELY 308
+ APE I + + DVWS G +++E++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 280 YRAPEVILELGWAQPCDVWSIGCIIFELY 308
+ APE I + + DVWS G +++E++
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 27.7 bits (60), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 280 YRAPEVILELGWAQPCDVWSIGCIIFELY 308
+ APE I + + DVWS G +++E++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,380,251
Number of Sequences: 62578
Number of extensions: 398618
Number of successful extensions: 2760
Number of sequences better than 100.0: 744
Number of HSP's better than 100.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 1323
Number of HSP's gapped (non-prelim): 1372
length of query: 351
length of database: 14,973,337
effective HSP length: 100
effective length of query: 251
effective length of database: 8,715,537
effective search space: 2187599787
effective search space used: 2187599787
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)