Query psy2006
Match_columns 351
No_of_seqs 144 out of 1725
Neff 9.0
Searched_HMMs 46136
Date Fri Aug 16 21:49:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2006.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2006hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0595|consensus 100.0 9.8E-46 2.1E-50 334.7 9.2 203 2-324 16-224 (429)
2 KOG0615|consensus 100.0 5E-44 1.1E-48 323.5 13.8 221 2-347 178-416 (475)
3 KOG0575|consensus 100.0 2.4E-43 5.2E-48 333.3 10.0 217 2-347 24-248 (592)
4 KOG0671|consensus 100.0 1.2E-42 2.6E-47 312.0 13.1 250 2-349 95-370 (415)
5 KOG0598|consensus 100.0 1.1E-42 2.4E-47 312.0 6.9 198 1-324 30-235 (357)
6 KOG0667|consensus 100.0 1.2E-41 2.7E-46 324.7 11.9 207 1-323 191-397 (586)
7 KOG0616|consensus 100.0 1.8E-41 3.8E-46 295.4 7.9 215 1-347 49-271 (355)
8 KOG0605|consensus 100.0 2.7E-41 6E-46 314.9 9.3 261 1-347 146-422 (550)
9 KOG0600|consensus 100.0 6.3E-41 1.4E-45 310.2 9.8 199 1-324 122-330 (560)
10 KOG0593|consensus 100.0 3E-41 6.5E-46 294.7 6.3 199 1-324 7-212 (396)
11 KOG0581|consensus 100.0 1.8E-39 4E-44 291.4 12.2 191 1-317 84-280 (364)
12 KOG0591|consensus 100.0 2.3E-41 4.9E-46 292.9 -0.2 195 1-319 24-233 (375)
13 KOG0661|consensus 100.0 2.7E-39 5.8E-44 297.5 12.3 196 1-226 15-299 (538)
14 KOG0659|consensus 100.0 1.6E-39 3.5E-44 279.3 8.4 215 1-340 7-236 (318)
15 KOG1290|consensus 100.0 2.1E-38 4.6E-43 292.0 14.8 299 1-323 83-460 (590)
16 KOG0583|consensus 100.0 3.4E-39 7.5E-44 303.6 9.5 198 2-324 23-233 (370)
17 KOG0610|consensus 100.0 1E-38 2.2E-43 289.4 10.2 269 1-347 82-367 (459)
18 KOG0597|consensus 100.0 2.4E-39 5.2E-44 302.7 6.1 195 2-322 8-208 (808)
19 KOG0588|consensus 100.0 3E-39 6.5E-44 307.2 6.8 214 2-347 18-242 (786)
20 KOG0594|consensus 100.0 2.9E-38 6.2E-43 283.2 10.3 200 1-323 16-230 (323)
21 KOG0592|consensus 100.0 2.2E-38 4.8E-43 295.5 7.0 197 2-324 79-297 (604)
22 KOG0611|consensus 100.0 2.2E-38 4.8E-43 286.2 5.6 193 2-320 59-259 (668)
23 KOG0660|consensus 100.0 8E-38 1.7E-42 279.9 8.1 197 1-323 27-237 (359)
24 KOG0663|consensus 100.0 8.6E-38 1.9E-42 276.4 7.5 210 1-335 81-307 (419)
25 KOG0694|consensus 100.0 3.3E-38 7.1E-43 301.9 4.9 197 1-324 373-578 (694)
26 KOG0032|consensus 100.0 2.7E-37 5.8E-42 290.9 11.0 221 2-347 41-272 (382)
27 KOG0198|consensus 100.0 1.7E-36 3.8E-41 275.5 13.5 192 2-317 23-225 (313)
28 KOG0658|consensus 100.0 4.4E-37 9.5E-42 275.6 4.0 196 2-323 30-235 (364)
29 cd05628 STKc_NDR1 Catalytic do 100.0 2.7E-36 6E-41 285.8 9.6 227 1-323 6-245 (363)
30 KOG0033|consensus 100.0 3E-38 6.6E-43 268.6 -3.4 221 2-347 17-246 (355)
31 cd05625 STKc_LATS1 Catalytic d 100.0 5.3E-36 1.1E-40 285.8 11.2 231 1-322 6-256 (382)
32 KOG0585|consensus 100.0 1.7E-36 3.8E-41 278.8 7.2 216 1-347 102-351 (576)
33 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-35 2.4E-40 283.5 11.7 235 1-322 6-256 (381)
34 KOG4236|consensus 100.0 1.8E-35 3.8E-40 274.8 12.5 223 2-347 570-798 (888)
35 cd05598 STKc_LATS Catalytic do 100.0 3.8E-35 8.2E-40 279.3 14.6 231 1-322 6-252 (376)
36 KOG0192|consensus 100.0 2.7E-35 6E-40 275.1 13.2 194 2-321 47-253 (362)
37 cd05599 STKc_NDR_like Catalyti 100.0 9.9E-36 2.1E-40 282.0 10.3 230 1-323 6-248 (364)
38 KOG0578|consensus 100.0 5.2E-36 1.1E-40 281.5 7.4 205 2-333 279-492 (550)
39 cd05629 STKc_NDR_like_fungal C 100.0 4.2E-35 9E-40 279.1 13.4 239 1-323 6-257 (377)
40 cd05627 STKc_NDR2 Catalytic do 100.0 4.3E-35 9.4E-40 277.3 13.3 226 1-323 6-245 (360)
41 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-35 8.5E-40 274.6 12.1 197 1-323 6-207 (333)
42 cd05571 STKc_PKB Catalytic dom 100.0 6.1E-35 1.3E-39 272.3 13.3 195 2-322 1-203 (323)
43 KOG0201|consensus 100.0 2.1E-36 4.5E-41 276.2 2.8 198 1-324 18-221 (467)
44 KOG0580|consensus 100.0 1.4E-36 3.1E-41 257.6 1.5 218 2-347 28-252 (281)
45 KOG0599|consensus 100.0 1.8E-36 3.9E-41 261.5 1.7 219 2-347 23-262 (411)
46 KOG0589|consensus 100.0 2.1E-35 4.5E-40 275.4 7.6 199 1-323 9-215 (426)
47 PTZ00263 protein kinase A cata 100.0 5.4E-35 1.2E-39 273.3 10.4 196 2-323 24-224 (329)
48 cd05594 STKc_PKB_alpha Catalyt 100.0 4.8E-34 1E-38 266.4 15.6 195 2-322 1-204 (325)
49 KOG0582|consensus 100.0 1.2E-34 2.5E-39 265.1 10.3 199 2-324 32-242 (516)
50 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-34 2.7E-39 275.1 10.8 195 2-323 49-256 (370)
51 PTZ00426 cAMP-dependent protei 100.0 1.7E-34 3.8E-39 271.1 11.3 195 2-322 36-236 (340)
52 cd05631 STKc_GRK4 Catalytic do 100.0 3.5E-34 7.7E-39 262.4 12.9 195 1-319 5-206 (285)
53 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-34 6.9E-39 268.1 12.6 195 2-322 1-203 (328)
54 cd05612 STKc_PRKX_like Catalyt 100.0 6E-35 1.3E-39 268.3 7.5 197 1-323 6-207 (291)
55 cd05585 STKc_YPK1_like Catalyt 100.0 2.9E-34 6.3E-39 266.4 11.9 194 4-323 1-202 (312)
56 KOG0607|consensus 100.0 2.2E-35 4.7E-40 259.7 4.0 223 2-348 84-341 (463)
57 PTZ00284 protein kinase; Provi 100.0 2E-34 4.3E-39 281.9 10.5 217 2-322 135-353 (467)
58 cd05595 STKc_PKB_beta Catalyti 100.0 4.1E-34 8.8E-39 266.8 11.1 195 2-322 1-203 (323)
59 KOG0197|consensus 100.0 3.1E-34 6.6E-39 268.6 10.2 198 1-324 211-415 (468)
60 cd05596 STKc_ROCK Catalytic do 100.0 5.3E-34 1.2E-38 270.8 10.8 195 2-323 49-256 (370)
61 cd05622 STKc_ROCK1 Catalytic d 100.0 6.8E-34 1.5E-38 270.2 10.8 195 2-323 49-256 (371)
62 cd05582 STKc_RSK_N N-terminal 100.0 2.8E-33 6.1E-38 260.4 14.4 197 1-323 1-207 (318)
63 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-33 2.7E-38 263.2 11.9 196 2-323 1-205 (321)
64 cd05592 STKc_nPKC_theta_delta 100.0 8.8E-34 1.9E-38 263.7 10.7 196 2-323 1-205 (316)
65 cd05620 STKc_nPKC_delta Cataly 100.0 5E-34 1.1E-38 265.4 9.1 196 2-323 1-205 (316)
66 KOG0662|consensus 100.0 3.7E-34 8E-39 233.6 6.9 198 1-323 7-212 (292)
67 cd05604 STKc_SGK3 Catalytic do 100.0 2.6E-33 5.5E-38 261.5 13.5 196 2-323 1-205 (325)
68 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-33 3.6E-38 265.1 12.2 219 2-322 7-238 (350)
69 KOG4717|consensus 100.0 3.2E-34 6.9E-39 265.9 7.1 220 3-349 25-251 (864)
70 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-33 4.6E-38 261.9 12.6 195 1-321 1-207 (323)
71 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-33 5.1E-38 262.3 12.6 189 2-316 1-198 (329)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-33 2.5E-38 263.4 10.2 196 2-323 1-205 (320)
73 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-33 7.5E-38 261.4 13.3 196 2-322 7-216 (331)
74 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-33 2.8E-38 260.8 10.1 193 1-318 10-208 (303)
75 KOG0604|consensus 100.0 1.9E-34 4.1E-39 251.8 4.2 220 2-347 68-301 (400)
76 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-33 2.3E-38 259.6 9.4 197 1-322 10-212 (288)
77 cd05587 STKc_cPKC Catalytic do 100.0 1.6E-33 3.4E-38 262.9 10.6 198 1-323 5-210 (324)
78 KOG0574|consensus 100.0 7.3E-35 1.6E-39 254.6 1.6 197 1-323 38-238 (502)
79 cd05603 STKc_SGK2 Catalytic do 100.0 3.3E-33 7.3E-38 260.3 12.8 194 2-321 1-203 (321)
80 cd05602 STKc_SGK1 Catalytic do 100.0 2.6E-33 5.6E-38 261.5 12.0 195 2-322 1-204 (325)
81 cd05601 STKc_CRIK Catalytic do 100.0 6.6E-33 1.4E-37 259.2 14.6 196 2-322 7-217 (330)
82 KOG0586|consensus 100.0 3.1E-33 6.8E-38 265.0 12.4 195 2-322 62-263 (596)
83 cd05586 STKc_Sck1_like Catalyt 100.0 5.5E-33 1.2E-37 259.8 13.8 194 4-323 1-206 (330)
84 cd05575 STKc_SGK Catalytic dom 100.0 4.1E-33 9E-38 259.9 12.9 195 2-322 1-204 (323)
85 cd05617 STKc_aPKC_zeta Catalyt 100.0 5E-33 1.1E-37 259.9 13.3 191 2-318 1-200 (327)
86 cd05619 STKc_nPKC_theta Cataly 100.0 2E-33 4.3E-38 261.3 10.4 196 2-323 1-205 (316)
87 cd05618 STKc_aPKC_iota Catalyt 100.0 5.6E-33 1.2E-37 259.8 12.7 188 2-315 1-197 (329)
88 cd05616 STKc_cPKC_beta Catalyt 100.0 3.2E-33 6.9E-38 260.7 10.9 198 1-323 5-210 (323)
89 cd05623 STKc_MRCK_alpha Cataly 100.0 3.4E-33 7.4E-38 261.5 10.8 198 1-323 6-217 (332)
90 PHA03212 serine/threonine kina 100.0 3.5E-33 7.7E-38 266.8 10.8 187 1-318 97-287 (391)
91 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-33 1E-37 260.5 11.3 197 1-322 6-216 (331)
92 KOG0577|consensus 100.0 6.9E-34 1.5E-38 267.2 5.0 199 1-325 31-236 (948)
93 cd05570 STKc_PKC Catalytic dom 100.0 5E-33 1.1E-37 258.9 10.2 196 2-323 1-205 (318)
94 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-33 8.9E-38 260.0 9.3 195 1-322 4-209 (324)
95 cd05615 STKc_cPKC_alpha Cataly 100.0 5.3E-33 1.1E-37 259.3 9.6 196 2-322 6-209 (323)
96 KOG0612|consensus 100.0 1.9E-34 4.2E-39 287.8 -0.1 216 2-347 81-315 (1317)
97 KOG4279|consensus 100.0 4.4E-33 9.6E-38 265.8 8.8 220 3-346 582-810 (1226)
98 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-32 3.1E-37 251.7 11.6 195 2-320 6-207 (285)
99 KOG4250|consensus 100.0 2.4E-33 5.3E-38 269.2 6.6 199 2-320 19-230 (732)
100 KOG4721|consensus 100.0 3.6E-33 7.8E-38 261.5 7.2 190 1-324 129-321 (904)
101 cd07848 STKc_CDKL5 Catalytic d 100.0 7.7E-33 1.7E-37 253.3 9.2 195 2-321 7-208 (287)
102 cd05614 STKc_MSK2_N N-terminal 100.0 3.4E-32 7.5E-37 254.5 13.6 192 1-318 5-211 (332)
103 cd05608 STKc_GRK1 Catalytic do 100.0 2.4E-32 5.2E-37 249.6 12.1 191 4-318 1-201 (280)
104 KOG0690|consensus 100.0 1.2E-33 2.7E-38 249.2 3.2 206 1-332 173-389 (516)
105 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-32 3.2E-37 257.2 9.6 192 2-319 6-213 (338)
106 cd05607 STKc_GRK7 Catalytic do 100.0 5.1E-32 1.1E-36 247.1 12.7 191 4-318 1-198 (277)
107 cd07868 STKc_CDK8 Catalytic do 100.0 2.7E-32 5.8E-37 253.4 11.0 197 2-319 7-221 (317)
108 cd06649 PKc_MEK2 Catalytic dom 100.0 3.6E-32 7.8E-37 254.5 11.8 195 1-321 10-209 (331)
109 PTZ00036 glycogen synthase kin 100.0 1.4E-32 3E-37 266.7 9.1 195 2-322 72-279 (440)
110 cd07862 STKc_CDK6 Catalytic do 100.0 2.6E-32 5.7E-37 250.1 10.1 199 1-323 6-218 (290)
111 KOG0670|consensus 100.0 4.8E-32 1E-36 251.6 10.9 203 4-323 440-644 (752)
112 cd07863 STKc_CDK4 Catalytic do 100.0 5.5E-32 1.2E-36 247.6 9.8 197 1-321 5-214 (288)
113 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-31 2.7E-36 245.5 12.1 193 2-318 6-205 (285)
114 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-31 2.6E-36 245.5 12.0 194 2-319 6-206 (285)
115 KOG1152|consensus 100.0 7.9E-32 1.7E-36 252.9 10.7 192 1-316 566-771 (772)
116 cd07876 STKc_JNK2 Catalytic do 100.0 1.2E-31 2.5E-36 253.8 11.7 190 2-319 27-227 (359)
117 cd07853 STKc_NLK Catalytic dom 100.0 4.7E-32 1E-36 257.7 9.0 195 1-321 5-212 (372)
118 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-31 2.8E-36 251.0 11.6 194 1-320 10-208 (333)
119 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-32 1.4E-36 250.1 9.3 197 1-322 11-213 (309)
120 PTZ00267 NIMA-related protein 100.0 9.7E-32 2.1E-36 263.5 11.0 198 2-323 73-280 (478)
121 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.9E-32 2.2E-36 252.6 10.4 192 1-319 20-221 (343)
122 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-31 3.1E-36 250.9 10.0 219 2-321 13-284 (338)
123 PRK13184 pknD serine/threonine 100.0 1.7E-31 3.8E-36 271.6 10.4 206 2-323 8-240 (932)
124 KOG0193|consensus 100.0 1E-31 2.2E-36 253.9 7.9 194 2-324 398-603 (678)
125 PLN00034 mitogen-activated pro 100.0 1.5E-31 3.3E-36 252.4 9.1 188 1-318 79-277 (353)
126 KOG1187|consensus 100.0 5.3E-31 1.1E-35 247.5 12.0 192 2-318 81-282 (361)
127 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-31 4.1E-36 252.7 8.8 192 2-321 30-232 (364)
128 KOG0696|consensus 100.0 1.6E-32 3.5E-37 248.8 0.9 198 2-324 355-560 (683)
129 KOG0608|consensus 100.0 1.2E-31 2.7E-36 253.7 6.8 233 1-324 634-881 (1034)
130 cd07874 STKc_JNK3 Catalytic do 100.0 2.9E-31 6.2E-36 250.7 9.3 190 2-319 23-223 (355)
131 PTZ00283 serine/threonine prot 100.0 3.3E-31 7.2E-36 260.3 9.8 198 2-323 38-254 (496)
132 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-30 7.8E-35 231.4 15.2 197 2-322 6-208 (255)
133 PHA03207 serine/threonine kina 100.0 4E-31 8.7E-36 253.0 9.2 188 2-319 98-292 (392)
134 cd07867 STKc_CDC2L6 Catalytic 100.0 6.9E-31 1.5E-35 243.8 10.4 197 2-319 7-221 (317)
135 cd05052 PTKc_Abl Catalytic dom 100.0 8.9E-31 1.9E-35 236.7 10.7 198 2-323 12-215 (263)
136 cd05106 PTKc_CSF-1R Catalytic 100.0 1E-30 2.3E-35 248.6 11.0 219 2-321 44-322 (374)
137 PHA02988 hypothetical protein; 100.0 9.1E-31 2E-35 239.7 10.0 194 2-323 26-231 (283)
138 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-30 2.3E-35 241.1 9.6 196 1-321 11-212 (301)
139 KOG0614|consensus 100.0 1.2E-32 2.7E-37 255.0 -3.6 196 3-324 427-629 (732)
140 cd05072 PTKc_Lyn Catalytic dom 100.0 2.5E-30 5.5E-35 233.2 11.5 198 1-323 11-214 (261)
141 KOG0194|consensus 100.0 6.1E-30 1.3E-34 243.0 14.6 196 2-322 163-371 (474)
142 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-30 3.8E-35 235.4 10.3 195 2-321 11-216 (266)
143 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-30 6.7E-35 238.9 12.1 195 1-321 6-205 (308)
144 cd06637 STKc_TNIK Catalytic do 100.0 2.7E-30 5.8E-35 234.3 11.4 194 2-319 12-221 (272)
145 cd06619 PKc_MKK5 Catalytic dom 100.0 4E-30 8.8E-35 234.6 12.5 188 1-318 6-197 (279)
146 cd05580 STKc_PKA Catalytic dom 100.0 3.3E-30 7.2E-35 236.5 11.9 193 2-320 7-204 (290)
147 PHA03209 serine/threonine kina 100.0 1.6E-30 3.5E-35 245.9 9.9 185 2-316 72-259 (357)
148 PTZ00266 NIMA-related protein 100.0 1.8E-30 4E-35 265.3 11.0 214 1-321 18-250 (1021)
149 cd05096 PTKc_DDR1 Catalytic do 100.0 2.8E-30 6.1E-35 238.5 11.2 215 2-323 11-251 (304)
150 cd05084 PTKc_Fes Catalytic dom 100.0 3.8E-30 8.2E-35 230.9 11.7 195 2-321 1-204 (252)
151 cd08227 PK_STRAD_alpha Pseudok 100.0 3E-30 6.6E-35 241.0 11.4 195 1-319 3-215 (327)
152 cd06644 STKc_STK10_LOK Catalyt 100.0 5.9E-30 1.3E-34 235.0 12.9 196 1-321 17-222 (292)
153 cd06654 STKc_PAK1 Catalytic do 100.0 2.1E-30 4.5E-35 238.8 9.7 193 2-321 26-223 (296)
154 KOG0986|consensus 100.0 2.6E-31 5.6E-36 243.4 3.6 192 2-317 191-389 (591)
155 cd07861 STKc_CDK1_euk Catalyti 100.0 2.9E-30 6.3E-35 235.7 10.2 195 1-319 5-207 (285)
156 cd06643 STKc_SLK Catalytic dom 100.0 5.7E-30 1.2E-34 233.8 12.0 197 2-323 11-217 (282)
157 KOG0596|consensus 100.0 1.7E-30 3.8E-35 243.1 8.5 192 1-318 366-576 (677)
158 cd05104 PTKc_Kit Catalytic dom 100.0 4.6E-30 1E-34 244.3 11.5 218 2-320 41-323 (375)
159 cd05633 STKc_GRK3 Catalytic do 100.0 3.8E-30 8.2E-35 235.0 10.4 194 3-319 1-201 (279)
160 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5E-30 1.1E-34 230.8 11.1 197 1-323 9-211 (256)
161 cd08529 STKc_FA2-like Catalyti 100.0 9.3E-30 2E-34 228.5 12.6 196 2-321 6-208 (256)
162 PHA03211 serine/threonine kina 100.0 3.2E-30 6.8E-35 250.3 10.1 185 2-316 175-364 (461)
163 cd06646 STKc_MAP4K5 Catalytic 100.0 7.5E-30 1.6E-34 230.9 11.9 195 1-321 14-216 (267)
164 KOG1026|consensus 100.0 1.3E-30 2.9E-35 255.5 7.3 220 1-333 491-727 (774)
165 KOG1989|consensus 100.0 2.6E-30 5.6E-35 254.4 9.2 209 2-335 43-278 (738)
166 cd07844 STKc_PCTAIRE_like Cata 100.0 4.7E-30 1E-34 235.3 10.4 192 2-318 11-208 (291)
167 KOG0579|consensus 100.0 2.7E-31 5.8E-36 251.4 2.1 198 2-324 38-245 (1187)
168 cd06645 STKc_MAP4K3 Catalytic 100.0 9.3E-30 2E-34 230.3 11.9 193 2-320 15-215 (267)
169 PF00069 Pkinase: Protein kina 100.0 2.4E-30 5.2E-35 232.7 7.8 190 2-317 5-202 (260)
170 cd05610 STKc_MASTL Catalytic d 100.0 9.9E-30 2.2E-34 258.1 12.9 151 1-182 9-175 (669)
171 cd05049 PTKc_Trk Catalytic dom 100.0 7.5E-30 1.6E-34 232.4 10.9 198 2-323 11-234 (280)
172 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-29 3.1E-34 228.3 12.6 195 2-322 8-215 (263)
173 cd08221 STKc_Nek9 Catalytic do 100.0 1.4E-29 2.9E-34 227.7 12.2 199 1-323 5-210 (256)
174 cd05048 PTKc_Ror Catalytic Dom 100.0 9.2E-30 2E-34 232.3 11.2 213 1-323 10-236 (283)
175 cd06611 STKc_SLK_like Catalyti 100.0 5.5E-30 1.2E-34 233.6 9.6 195 2-321 11-215 (280)
176 cd08223 STKc_Nek4 Catalytic do 100.0 1.8E-29 3.8E-34 227.0 12.6 197 1-321 5-209 (257)
177 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-29 2.4E-34 243.2 11.9 217 2-321 43-347 (400)
178 cd06656 STKc_PAK3 Catalytic do 100.0 9.3E-30 2E-34 234.5 10.8 193 2-321 25-222 (297)
179 cd05606 STKc_beta_ARK Catalyti 100.0 9.8E-30 2.1E-34 232.1 10.6 190 3-318 1-200 (278)
180 cd05574 STKc_phototropin_like 100.0 7.8E-30 1.7E-34 236.8 10.1 223 1-323 6-241 (316)
181 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.6E-29 3.4E-34 230.8 11.9 196 2-321 22-233 (282)
182 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.2E-30 1.3E-34 230.6 9.1 198 1-323 11-214 (261)
183 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-29 2.3E-34 229.7 10.3 197 1-323 11-213 (262)
184 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-29 2.8E-34 228.8 10.8 197 2-323 12-214 (261)
185 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-29 3.5E-34 231.8 11.6 193 1-318 10-208 (291)
186 cd07839 STKc_CDK5 Catalytic do 100.0 4.3E-30 9.3E-35 234.6 7.6 190 2-316 6-202 (284)
187 KOG1151|consensus 100.0 5.1E-30 1.1E-34 234.4 7.8 218 2-346 469-719 (775)
188 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-29 2.6E-34 228.4 10.2 196 2-323 10-211 (256)
189 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-29 3.1E-34 228.3 10.5 197 1-323 11-213 (260)
190 cd05577 STKc_GRK Catalytic dom 100.0 2.1E-29 4.6E-34 229.5 11.7 192 4-319 1-199 (277)
191 cd05609 STKc_MAST Catalytic do 100.0 2.1E-29 4.5E-34 232.9 11.7 197 1-323 6-225 (305)
192 cd06655 STKc_PAK2 Catalytic do 100.0 9.2E-30 2E-34 234.5 9.1 192 2-320 25-221 (296)
193 cd06640 STKc_MST4 Catalytic do 100.0 2.3E-29 5E-34 229.3 11.6 195 1-322 9-209 (277)
194 cd05088 PTKc_Tie2 Catalytic do 100.0 2.4E-29 5.2E-34 232.4 11.7 198 2-323 13-233 (303)
195 cd08228 STKc_Nek6 Catalytic do 100.0 3.2E-29 6.9E-34 226.7 12.1 193 2-318 8-210 (267)
196 cd05611 STKc_Rim15_like Cataly 100.0 1.9E-29 4E-34 227.5 10.2 196 1-323 1-202 (260)
197 cd00192 PTKc Catalytic domain 100.0 2.7E-29 5.8E-34 225.6 11.0 198 2-323 1-217 (262)
198 cd06631 STKc_YSK4 Catalytic do 100.0 1.8E-29 3.8E-34 228.2 9.9 193 2-321 6-215 (265)
199 cd05039 PTKc_Csk_like Catalyti 100.0 2E-29 4.3E-34 226.8 10.1 196 2-323 12-209 (256)
200 cd06609 STKc_MST3_like Catalyt 100.0 3E-29 6.5E-34 228.0 11.4 193 2-321 7-205 (274)
201 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.8E-29 6E-34 226.4 11.0 197 1-323 11-213 (260)
202 cd05108 PTKc_EGFR Catalytic do 100.0 2.1E-29 4.6E-34 234.1 10.5 195 1-321 12-219 (316)
203 cd06630 STKc_MEKK1 Catalytic d 100.0 3.1E-29 6.7E-34 226.8 11.2 192 2-318 6-212 (268)
204 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-29 5.5E-34 225.6 10.6 194 2-321 9-206 (256)
205 KOG2345|consensus 100.0 5.2E-30 1.1E-34 218.8 5.6 211 2-336 27-268 (302)
206 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.3E-29 4.9E-34 230.2 10.3 197 1-321 6-214 (286)
207 cd07850 STKc_JNK Catalytic dom 100.0 2.2E-29 4.8E-34 237.7 10.4 189 2-318 22-221 (353)
208 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-29 5.5E-34 229.6 10.2 197 2-322 11-235 (283)
209 cd05115 PTKc_Zap-70 Catalytic 100.0 4.4E-29 9.6E-34 225.1 11.7 194 3-322 2-207 (257)
210 PLN00009 cyclin-dependent kina 100.0 3.1E-29 6.8E-34 230.3 10.8 196 2-320 8-210 (294)
211 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.1E-29 6.7E-34 228.4 10.6 201 2-323 12-231 (277)
212 cd05054 PTKc_VEGFR Catalytic d 100.0 3.4E-29 7.4E-34 235.0 11.1 220 1-321 12-283 (337)
213 cd06638 STKc_myosinIIIA Cataly 100.0 6E-29 1.3E-33 227.3 12.4 197 1-321 23-236 (286)
214 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-29 7E-34 228.8 10.5 195 2-321 6-208 (286)
215 cd08220 STKc_Nek8 Catalytic do 100.0 4E-29 8.7E-34 224.4 10.9 198 2-322 6-209 (256)
216 cd06659 STKc_PAK6 Catalytic do 100.0 9.4E-30 2E-34 234.5 6.9 194 2-322 27-225 (297)
217 cd06642 STKc_STK25-YSK1 Cataly 100.0 2E-29 4.2E-34 229.6 8.8 194 2-322 10-209 (277)
218 cd08218 STKc_Nek1 Catalytic do 100.0 3.8E-29 8.3E-34 224.8 10.6 198 1-322 5-209 (256)
219 cd06653 STKc_MEKK3_like_1 Cata 100.0 3E-29 6.5E-34 226.9 9.8 196 2-323 8-218 (264)
220 cd05082 PTKc_Csk Catalytic dom 100.0 7.2E-29 1.6E-33 223.2 12.2 194 2-322 12-208 (256)
221 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.7E-29 8E-34 228.8 10.4 192 2-319 11-207 (284)
222 KOG0666|consensus 100.0 2.3E-30 4.9E-35 227.4 2.2 197 2-318 30-244 (438)
223 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.1E-29 1.1E-33 224.0 11.2 199 2-320 1-213 (259)
224 cd05116 PTKc_Syk Catalytic dom 100.0 4.2E-29 9E-34 225.0 10.6 194 2-322 1-207 (257)
225 cd06652 STKc_MEKK2 Catalytic d 100.0 6.5E-29 1.4E-33 224.7 11.9 195 2-322 8-217 (265)
226 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-29 6E-34 230.9 9.4 195 2-321 6-210 (298)
227 cd07860 STKc_CDK2_3 Catalytic 100.0 3.4E-29 7.5E-34 228.6 9.9 196 1-320 5-207 (284)
228 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.3E-29 9.3E-34 228.0 10.5 194 2-321 7-208 (286)
229 cd06608 STKc_myosinIII_like Ca 100.0 4.1E-29 8.9E-34 226.4 10.2 196 2-321 12-225 (275)
230 cd06613 STKc_MAP4K3_like Catal 100.0 7.2E-29 1.6E-33 223.5 11.8 195 2-321 9-211 (262)
231 cd05572 STKc_cGK_PKG Catalytic 100.0 9.6E-29 2.1E-33 223.0 12.5 189 4-318 1-196 (262)
232 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.1E-29 1.8E-33 223.7 12.0 193 2-318 8-210 (267)
233 cd05047 PTKc_Tie Catalytic dom 100.0 6E-29 1.3E-33 225.7 11.1 198 2-323 1-221 (270)
234 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.8E-29 8.3E-34 225.3 9.7 196 1-322 9-210 (256)
235 cd06647 STKc_PAK_I Catalytic d 100.0 4.9E-29 1.1E-33 229.3 10.6 196 1-323 24-224 (293)
236 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-29 2.3E-34 233.6 6.2 193 2-321 28-225 (292)
237 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-28 2.6E-33 226.1 13.1 198 2-323 18-244 (293)
238 cd07842 STKc_CDK8_like Catalyt 100.0 3.4E-29 7.4E-34 232.0 9.5 200 2-321 6-223 (316)
239 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.8E-29 1.7E-33 224.7 11.7 197 2-322 1-218 (269)
240 cd06624 STKc_ASK Catalytic dom 100.0 5.5E-29 1.2E-33 225.5 10.6 193 2-318 14-215 (268)
241 cd05032 PTKc_InsR_like Catalyt 100.0 6.9E-29 1.5E-33 225.7 11.1 198 2-323 12-231 (277)
242 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-28 2.5E-33 224.6 12.6 201 2-321 1-229 (274)
243 cd05060 PTKc_Syk_like Catalyti 100.0 8.9E-29 1.9E-33 222.8 11.6 194 2-322 1-207 (257)
244 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.9E-29 1.5E-33 224.5 10.9 194 2-321 6-219 (267)
245 cd05091 PTKc_Ror2 Catalytic do 100.0 4E-29 8.8E-34 228.2 9.4 212 2-323 11-236 (283)
246 cd05040 PTKc_Ack_like Catalyti 100.0 7.1E-29 1.5E-33 223.2 10.8 197 2-323 1-210 (257)
247 cd07836 STKc_Pho85 Catalytic d 100.0 5.4E-29 1.2E-33 227.2 10.2 197 1-321 5-208 (284)
248 cd05093 PTKc_TrkB Catalytic do 100.0 7.3E-29 1.6E-33 227.3 10.9 197 2-322 11-231 (288)
249 cd05034 PTKc_Src_like Catalyti 100.0 5.8E-29 1.2E-33 224.3 10.0 197 2-323 12-214 (261)
250 cd08229 STKc_Nek7 Catalytic do 100.0 6.8E-29 1.5E-33 224.5 10.5 193 2-318 8-210 (267)
251 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-29 1.4E-33 226.2 10.4 198 2-323 12-231 (277)
252 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-28 2.4E-33 236.2 12.5 220 2-322 43-350 (401)
253 cd05578 STKc_Yank1 Catalytic d 100.0 4.4E-29 9.6E-34 224.7 9.2 192 2-319 6-204 (258)
254 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.5E-28 3.4E-33 224.4 12.8 191 1-318 9-214 (283)
255 cd05055 PTKc_PDGFR Catalytic d 100.0 9.2E-29 2E-33 228.5 11.3 197 2-322 41-252 (302)
256 KOG4645|consensus 100.0 8.9E-30 1.9E-34 257.5 4.8 196 3-324 1242-1452(1509)
257 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-28 2.5E-33 221.6 11.5 193 2-322 12-206 (254)
258 cd05046 PTK_CCK4 Pseudokinase 100.0 8.9E-29 1.9E-33 224.9 10.7 200 1-324 10-229 (275)
259 cd05035 PTKc_Axl_like Catalyti 100.0 1.5E-28 3.3E-33 222.7 12.2 198 2-323 5-225 (273)
260 cd07845 STKc_CDK10 Catalytic d 100.0 4.8E-29 1E-33 230.9 8.8 197 2-323 13-218 (309)
261 smart00219 TyrKc Tyrosine kina 100.0 9.1E-29 2E-33 222.0 10.4 199 1-323 4-214 (258)
262 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-28 3.4E-33 224.0 12.1 192 2-317 7-210 (283)
263 PTZ00024 cyclin-dependent prot 100.0 5.5E-29 1.2E-33 233.1 9.2 194 2-321 15-241 (335)
264 cd05042 PTKc_Aatyk Catalytic d 100.0 7.6E-29 1.6E-33 224.7 9.9 197 2-322 1-218 (269)
265 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-28 3.8E-33 221.4 12.1 198 2-323 7-216 (267)
266 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-28 2.5E-33 227.1 11.0 198 2-323 8-228 (297)
267 KOG0664|consensus 100.0 6.5E-31 1.4E-35 227.2 -3.8 195 2-322 59-266 (449)
268 cd07831 STKc_MOK Catalytic dom 100.0 9.8E-29 2.1E-33 225.1 10.3 195 1-321 4-206 (282)
269 cd05033 PTKc_EphR Catalytic do 100.0 1.7E-28 3.7E-33 222.0 11.8 197 2-323 10-218 (266)
270 cd06639 STKc_myosinIIIB Cataly 100.0 2.2E-28 4.7E-33 224.4 12.6 195 2-320 28-239 (291)
271 cd06641 STKc_MST3 Catalytic do 100.0 1.8E-28 4E-33 223.3 12.0 194 1-321 9-208 (277)
272 cd06607 STKc_TAO Catalytic dom 100.0 3.6E-28 7.7E-33 224.9 14.0 193 1-319 20-219 (307)
273 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-28 2.4E-33 222.6 10.4 196 2-323 12-213 (260)
274 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.9E-29 1.5E-33 233.4 9.3 191 2-319 21-221 (343)
275 cd05073 PTKc_Hck Catalytic dom 100.0 2.1E-28 4.5E-33 220.9 12.0 195 2-322 12-212 (260)
276 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-28 3E-33 224.5 10.9 198 1-322 10-233 (280)
277 cd05051 PTKc_DDR Catalytic dom 100.0 2.2E-28 4.7E-33 224.6 12.2 198 1-322 10-242 (296)
278 cd06651 STKc_MEKK3 Catalytic d 100.0 2.3E-28 4.9E-33 221.3 12.1 194 2-321 8-216 (266)
279 cd05112 PTKc_Itk Catalytic dom 100.0 1.3E-28 2.8E-33 221.3 10.4 195 2-322 10-210 (256)
280 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-28 2.9E-33 224.6 10.5 195 1-319 4-205 (283)
281 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-28 2.9E-33 227.7 10.6 198 2-323 24-252 (307)
282 PHA03210 serine/threonine kina 100.0 4E-29 8.8E-34 246.1 7.6 192 1-316 153-370 (501)
283 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-28 2.3E-33 226.6 9.9 195 2-321 11-214 (293)
284 cd06917 STKc_NAK1_like Catalyt 100.0 2E-28 4.4E-33 222.8 11.6 195 1-322 6-210 (277)
285 PHA03390 pk1 serine/threonine- 100.0 2.2E-28 4.7E-33 222.0 11.6 188 4-321 24-213 (267)
286 cd05109 PTKc_HER2 Catalytic do 100.0 1.6E-28 3.5E-33 223.9 10.8 195 1-321 12-219 (279)
287 cd05111 PTK_HER3 Pseudokinase 100.0 1.8E-28 3.9E-33 223.8 11.0 195 1-321 12-219 (279)
288 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-28 3.5E-33 222.3 10.6 197 2-323 11-220 (268)
289 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-28 5.2E-33 221.4 11.5 196 2-322 10-220 (269)
290 KOG0584|consensus 100.0 1.6E-29 3.5E-34 240.2 3.9 197 2-324 46-253 (632)
291 cd05085 PTKc_Fer Catalytic dom 100.0 3.5E-28 7.5E-33 217.8 12.4 195 2-322 1-203 (250)
292 cd05061 PTKc_InsR Catalytic do 100.0 2.1E-28 4.5E-33 224.4 11.0 199 1-323 11-231 (288)
293 cd08226 PK_STRAD_beta Pseudoki 100.0 1.8E-28 3.9E-33 229.1 10.8 194 2-319 4-215 (328)
294 cd06632 STKc_MEKK1_plant Catal 100.0 2.5E-28 5.4E-33 219.3 11.3 194 2-321 6-209 (258)
295 cd06605 PKc_MAPKK Catalytic do 100.0 1.2E-28 2.7E-33 222.4 9.4 191 2-317 7-202 (265)
296 cd05066 PTKc_EphR_A Catalytic 100.0 2.5E-28 5.4E-33 221.2 11.4 196 2-322 10-218 (267)
297 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-28 4E-33 225.1 10.6 197 2-321 7-219 (295)
298 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.2E-28 1.3E-32 220.7 13.8 190 1-315 9-213 (284)
299 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.6E-29 1.7E-33 223.5 7.4 201 2-320 1-212 (258)
300 cd06648 STKc_PAK_II Catalytic 100.0 3.5E-28 7.7E-33 222.6 11.9 192 2-320 25-221 (285)
301 cd05094 PTKc_TrkC Catalytic do 100.0 2.9E-28 6.4E-33 223.7 11.4 197 2-322 11-234 (291)
302 cd05044 PTKc_c-ros Catalytic d 100.0 9.6E-29 2.1E-33 223.8 8.0 202 2-322 1-222 (269)
303 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.9E-28 1.1E-32 219.0 12.6 200 2-320 1-216 (262)
304 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-28 3.9E-33 224.1 9.6 194 2-320 7-208 (288)
305 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-28 4.6E-33 226.0 10.1 194 2-320 18-230 (310)
306 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-28 5.2E-33 221.6 10.2 197 2-322 5-223 (272)
307 cd06616 PKc_MKK4 Catalytic dom 100.0 2.6E-28 5.7E-33 223.3 10.6 193 2-318 10-214 (288)
308 cd05041 PTKc_Fes_like Catalyti 100.0 4.2E-28 9.2E-33 217.3 11.7 194 2-321 1-203 (251)
309 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-28 4.8E-33 224.9 10.1 207 2-322 11-241 (295)
310 cd07846 STKc_CDKL2_3 Catalytic 100.0 1E-28 2.2E-33 225.6 7.8 193 1-319 6-206 (286)
311 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.2E-28 6.9E-33 220.9 10.9 193 2-320 7-218 (272)
312 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.6E-28 7.8E-33 225.6 11.5 198 2-323 18-246 (314)
313 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-28 3.3E-33 230.4 9.1 191 2-318 11-213 (337)
314 cd05101 PTKc_FGFR2 Catalytic d 100.0 3E-28 6.4E-33 225.0 10.8 212 2-323 21-249 (304)
315 KOG0983|consensus 100.0 1.3E-28 2.8E-33 213.0 7.7 193 2-318 98-298 (391)
316 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-28 2.9E-33 230.7 8.4 190 2-318 11-214 (336)
317 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.2E-28 4.7E-33 230.2 9.8 191 2-319 23-223 (345)
318 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.5E-28 7.6E-33 228.6 11.1 218 1-319 12-287 (343)
319 cd07838 STKc_CDK4_6_like Catal 100.0 4.1E-28 8.9E-33 221.4 11.2 197 2-322 5-214 (287)
320 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.2E-28 9.1E-33 226.7 11.5 191 2-319 16-211 (328)
321 cd07840 STKc_CDK9_like Catalyt 100.0 2.6E-28 5.5E-33 222.7 9.8 196 1-321 4-209 (287)
322 cd05057 PTKc_EGFR_like Catalyt 100.0 5.7E-28 1.2E-32 220.2 11.9 195 2-322 13-220 (279)
323 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.5E-28 9.7E-33 222.0 11.2 193 1-317 6-206 (287)
324 cd06633 STKc_TAO3 Catalytic do 100.0 8.4E-28 1.8E-32 223.2 13.1 194 2-321 27-227 (313)
325 cd07834 STKc_MAPK Catalytic do 99.9 1.5E-28 3.3E-33 229.4 8.1 194 2-321 6-214 (330)
326 KOG0695|consensus 99.9 2.4E-29 5.1E-34 223.1 2.5 191 1-316 255-453 (593)
327 PF07714 Pkinase_Tyr: Protein 99.9 9.1E-29 2E-33 223.5 6.2 198 2-323 5-215 (259)
328 cd05579 STKc_MAST_like Catalyt 99.9 2.1E-28 4.5E-33 220.4 8.4 204 4-333 1-223 (265)
329 cd05095 PTKc_DDR2 Catalytic do 99.9 3.7E-28 8.1E-33 223.5 10.2 198 2-323 11-243 (296)
330 cd05045 PTKc_RET Catalytic dom 99.9 4E-28 8.7E-33 222.6 10.2 218 2-323 6-239 (290)
331 cd06626 STKc_MEKK4 Catalytic d 99.9 7.3E-28 1.6E-32 217.2 11.7 191 2-318 6-210 (264)
332 cd06635 STKc_TAO1 Catalytic do 99.9 1.2E-27 2.5E-32 222.6 13.2 194 2-321 31-231 (317)
333 cd07855 STKc_ERK5 Catalytic do 99.9 2.4E-28 5.2E-33 228.8 8.5 192 2-319 11-217 (334)
334 cd07830 STKc_MAK_like Catalyti 99.9 6.2E-28 1.3E-32 220.1 10.7 198 1-322 4-207 (283)
335 cd05086 PTKc_Aatyk2 Catalytic 99.9 8.2E-28 1.8E-32 218.1 11.4 198 2-323 1-218 (268)
336 cd08225 STKc_Nek5 Catalytic do 99.9 3.8E-28 8.2E-33 218.1 9.0 199 2-323 6-211 (257)
337 cd06614 STKc_PAK Catalytic dom 99.9 1.3E-27 2.8E-32 218.6 12.6 194 2-320 25-222 (286)
338 cd05100 PTKc_FGFR3 Catalytic d 99.9 9E-28 2E-32 224.9 11.8 198 2-323 18-246 (334)
339 cd06623 PKc_MAPKK_plant_like C 99.9 1.2E-27 2.5E-32 215.7 12.0 191 2-318 7-204 (264)
340 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1E-27 2.3E-32 218.9 11.9 192 1-317 9-214 (284)
341 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.9E-27 4.2E-32 216.7 13.3 193 1-318 9-216 (284)
342 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.3E-28 7.2E-33 228.7 8.3 192 2-319 11-224 (342)
343 cd05050 PTKc_Musk Catalytic do 99.9 5.3E-28 1.1E-32 221.5 9.3 219 1-323 10-242 (288)
344 cd06657 STKc_PAK4 Catalytic do 99.9 6.6E-28 1.4E-32 221.7 10.0 192 2-320 26-222 (292)
345 KOG1095|consensus 99.9 3.3E-28 7.1E-33 246.6 8.6 204 2-324 698-915 (1025)
346 cd05056 PTKc_FAK Catalytic dom 99.9 1.2E-27 2.6E-32 216.9 11.0 196 2-323 12-218 (270)
347 cd07879 STKc_p38delta_MAPK13 C 99.9 5.8E-28 1.3E-32 227.0 8.8 190 2-319 21-220 (342)
348 cd06634 STKc_TAO2 Catalytic do 99.9 1.7E-27 3.6E-32 220.6 11.7 194 2-321 21-221 (308)
349 cd08217 STKc_Nek2 Catalytic do 99.9 1.7E-27 3.6E-32 214.4 11.2 197 1-321 5-217 (265)
350 KOG0669|consensus 99.9 4.3E-30 9.4E-35 219.8 -5.4 198 2-324 23-239 (376)
351 cd05576 STKc_RPK118_like Catal 99.9 9.7E-28 2.1E-32 213.8 9.2 181 7-317 4-185 (237)
352 cd07851 STKc_p38 Catalytic dom 99.9 2.8E-28 6.1E-33 229.3 5.9 193 2-321 21-223 (343)
353 cd05613 STKc_MSK1_N N-terminal 99.9 2.1E-27 4.6E-32 217.7 11.6 190 2-317 6-211 (290)
354 cd05122 PKc_STE Catalytic doma 99.9 3.2E-27 6.8E-32 210.6 12.3 193 2-319 6-202 (253)
355 cd07852 STKc_MAPK15 Catalytic 99.9 1.8E-27 3.8E-32 223.1 11.0 192 2-320 13-219 (337)
356 PHA02882 putative serine/threo 99.9 1.1E-27 2.4E-32 220.5 9.4 192 2-319 18-238 (294)
357 cd05123 STKc_AGC Catalytic dom 99.9 2E-27 4.3E-32 212.6 10.8 192 4-321 1-200 (250)
358 cd05058 PTKc_Met_Ron Catalytic 99.9 2.7E-27 5.9E-32 213.4 11.7 193 2-319 1-208 (262)
359 cd05110 PTKc_HER4 Catalytic do 99.9 1.3E-27 2.8E-32 220.8 9.7 194 1-320 12-218 (303)
360 cd05581 STKc_PDK1 Catalytic do 99.9 6.1E-28 1.3E-32 219.4 7.1 210 2-322 7-230 (280)
361 cd08216 PK_STRAD Pseudokinase 99.9 2.6E-27 5.6E-32 219.6 11.0 192 3-318 5-214 (314)
362 cd06627 STKc_Cdc7_like Catalyt 99.9 5E-27 1.1E-31 210.2 12.3 194 2-321 6-206 (254)
363 cd07829 STKc_CDK_like Catalyti 99.9 1.5E-27 3.4E-32 217.1 9.1 194 2-320 5-205 (282)
364 cd08528 STKc_Nek10 Catalytic d 99.9 4.1E-27 8.9E-32 213.2 11.7 193 2-318 6-217 (269)
365 cd08215 STKc_Nek Catalytic dom 99.9 2.7E-27 5.9E-32 212.0 10.4 197 2-322 6-211 (258)
366 cd07866 STKc_BUR1 Catalytic do 99.9 1E-27 2.2E-32 221.6 7.6 195 2-321 14-234 (311)
367 cd07864 STKc_CDK12 Catalytic d 99.9 2.4E-27 5.2E-32 218.3 10.0 193 2-319 13-223 (302)
368 cd05118 STKc_CMGC Catalytic do 99.9 1.2E-27 2.6E-32 217.9 7.7 196 1-321 4-206 (283)
369 KOG0984|consensus 99.9 1.5E-27 3.3E-32 198.8 7.5 195 1-318 51-256 (282)
370 cd06606 STKc_MAPKKK Catalytic 99.9 3.4E-27 7.5E-32 211.2 10.2 191 2-318 6-207 (260)
371 KOG0587|consensus 99.9 1.6E-26 3.4E-31 226.6 15.3 200 2-324 25-238 (953)
372 cd08530 STKc_CNK2-like Catalyt 99.9 3.8E-27 8.3E-32 211.3 10.2 198 1-322 5-209 (256)
373 cd05043 PTK_Ryk Pseudokinase d 99.9 5.7E-27 1.2E-31 213.6 10.6 198 2-323 12-229 (280)
374 KOG4278|consensus 99.9 6.4E-28 1.4E-32 228.2 4.4 198 2-323 273-476 (1157)
375 KOG0603|consensus 99.9 3.8E-28 8.3E-33 231.6 2.9 210 3-347 329-542 (612)
376 cd07857 STKc_MPK1 Catalytic do 99.9 6.4E-27 1.4E-31 219.0 10.0 191 2-318 6-214 (332)
377 cd05074 PTKc_Tyro3 Catalytic d 99.9 7.5E-27 1.6E-31 211.9 10.0 197 2-322 5-224 (273)
378 KOG1006|consensus 99.9 5.8E-28 1.3E-32 208.2 2.5 196 1-319 69-274 (361)
379 cd08222 STKc_Nek11 Catalytic d 99.9 4.3E-27 9.4E-32 212.0 7.8 194 2-320 6-211 (260)
380 KOG0199|consensus 99.9 2.5E-27 5.4E-32 226.9 6.4 197 2-323 116-325 (1039)
381 cd05583 STKc_MSK_N N-terminal 99.9 9E-27 2E-31 213.3 9.9 190 2-317 6-211 (288)
382 cd06618 PKc_MKK7 Catalytic dom 99.9 1.5E-26 3.3E-31 212.8 10.3 191 2-317 21-221 (296)
383 KOG4257|consensus 99.9 1.7E-26 3.6E-31 218.9 8.6 197 2-324 395-603 (974)
384 KOG1035|consensus 99.9 7.2E-27 1.6E-31 235.5 5.9 63 1-69 484-548 (1351)
385 KOG0576|consensus 99.9 7.8E-27 1.7E-31 222.6 4.6 284 1-315 20-431 (829)
386 KOG0668|consensus 99.9 4.1E-27 9E-32 199.0 2.2 193 2-323 44-243 (338)
387 KOG1167|consensus 99.9 4E-26 8.8E-31 208.1 8.1 227 1-318 41-282 (418)
388 PLN00113 leucine-rich repeat r 99.9 9.2E-26 2E-30 239.2 11.5 182 2-317 696-881 (968)
389 KOG0196|consensus 99.9 9.5E-26 2.1E-30 218.5 9.7 198 2-324 635-845 (996)
390 KOG0665|consensus 99.9 1.2E-26 2.6E-31 204.8 2.8 194 1-323 22-226 (369)
391 KOG1094|consensus 99.9 5E-26 1.1E-30 214.3 5.5 199 2-325 544-752 (807)
392 smart00221 STYKc Protein kinas 99.9 1.5E-24 3.2E-29 190.3 9.9 194 2-320 5-207 (225)
393 PLN03225 Serine/threonine-prot 99.9 1.4E-24 3E-29 215.9 6.4 205 2-315 138-380 (566)
394 KOG1025|consensus 99.9 9.2E-25 2E-29 212.5 3.2 195 2-322 702-909 (1177)
395 KOG3653|consensus 99.9 3.3E-24 7.1E-29 198.0 5.7 189 1-318 215-428 (534)
396 KOG1027|consensus 99.9 9.7E-24 2.1E-28 206.2 8.3 196 3-320 516-721 (903)
397 smart00220 S_TKc Serine/Threon 99.9 1.4E-23 3E-28 185.7 8.6 184 8-317 1-189 (244)
398 PLN03224 probable serine/threo 99.9 2.3E-23 5E-28 202.9 10.6 215 2-316 151-435 (507)
399 KOG1345|consensus 99.9 9.1E-24 2E-28 182.9 6.0 199 2-324 30-235 (378)
400 KOG2052|consensus 99.9 4.1E-23 8.9E-28 189.5 6.0 189 2-321 217-443 (513)
401 KOG0200|consensus 99.9 2.8E-22 6.1E-27 201.1 11.2 204 2-318 302-526 (609)
402 cd00180 PKc Catalytic domain o 99.9 1.4E-21 3E-26 168.5 12.3 180 4-307 1-187 (215)
403 KOG1163|consensus 99.9 7.7E-22 1.7E-26 168.4 9.9 196 1-318 20-225 (341)
404 KOG1164|consensus 99.9 9.4E-22 2E-26 183.3 9.7 203 2-319 24-242 (322)
405 KOG1165|consensus 99.9 2.3E-21 5.1E-26 172.3 9.6 196 2-317 34-239 (449)
406 PRK09188 serine/threonine prot 99.8 3.3E-20 7.1E-25 173.7 13.1 113 2-156 24-146 (365)
407 PLN00181 protein SPA1-RELATED; 99.8 2.4E-21 5.3E-26 201.0 3.2 150 60-317 35-218 (793)
408 cd05147 RIO1_euk RIO kinase fa 99.8 9.8E-19 2.1E-23 150.5 10.1 131 2-166 3-169 (190)
409 COG0515 SPS1 Serine/threonine 99.8 1.3E-18 2.8E-23 159.3 10.8 191 2-319 6-216 (384)
410 cd05145 RIO1_like RIO kinase f 99.8 1.1E-17 2.3E-22 144.2 12.7 122 1-156 2-152 (190)
411 PRK10359 lipopolysaccharide co 99.8 3.7E-18 8E-23 149.4 9.9 115 1-156 36-169 (232)
412 KOG0590|consensus 99.7 2.5E-18 5.4E-23 171.1 5.6 195 2-322 324-533 (601)
413 PRK12274 serine/threonine prot 99.7 6.1E-17 1.3E-21 139.1 7.4 112 2-156 8-126 (218)
414 PRK10345 hypothetical protein; 99.7 3.3E-16 7.1E-21 136.4 12.0 123 2-156 8-139 (210)
415 KOG1024|consensus 99.7 7.4E-18 1.6E-22 152.9 1.3 197 3-323 291-508 (563)
416 KOG0606|consensus 99.7 3.7E-18 8E-23 171.3 -0.8 63 273-335 217-282 (1205)
417 KOG0603|consensus 99.7 6.2E-18 1.4E-22 162.1 -1.4 184 4-316 2-193 (612)
418 smart00750 KIND kinase non-cat 99.7 3.7E-17 7.9E-22 138.6 3.1 62 254-319 48-109 (176)
419 smart00090 RIO RIO-like kinase 99.6 2E-15 4.2E-20 134.4 11.0 121 2-155 34-182 (237)
420 PRK14879 serine/threonine prot 99.6 1.2E-14 2.7E-19 127.0 11.9 126 1-163 1-143 (211)
421 PF14531 Kinase-like: Kinase-l 99.6 1.9E-16 4.1E-21 142.7 -0.1 202 2-319 18-255 (288)
422 KOG1166|consensus 99.6 4.8E-16 1E-20 158.5 2.8 190 2-313 704-902 (974)
423 TIGR03724 arch_bud32 Kae1-asso 99.6 4E-14 8.7E-19 122.6 12.0 114 3-156 1-124 (199)
424 cd05144 RIO2_C RIO kinase fami 99.5 5.4E-14 1.2E-18 121.8 11.1 115 2-156 21-159 (198)
425 PRK09605 bifunctional UGMP fam 99.5 7.3E-14 1.6E-18 139.0 12.4 114 2-156 339-462 (535)
426 KOG0195|consensus 99.5 8.8E-16 1.9E-20 133.6 -2.2 195 2-322 196-397 (448)
427 KOG1240|consensus 99.5 1.4E-15 3E-20 153.3 -2.4 121 2-156 29-154 (1431)
428 cd05119 RIO RIO kinase family, 99.5 3.9E-13 8.4E-18 115.1 10.2 129 2-166 3-166 (187)
429 PRK01723 3-deoxy-D-manno-octul 99.4 4.6E-12 1E-16 112.9 12.6 118 3-156 38-176 (239)
430 cd05120 APH_ChoK_like Aminogly 99.4 3.7E-12 8E-17 104.1 11.1 117 1-156 3-123 (155)
431 KOG0590|consensus 99.4 1.9E-13 4.1E-18 136.4 2.4 199 1-323 25-239 (601)
432 KOG0661|consensus 99.3 4.4E-14 9.6E-19 131.5 -4.9 101 221-324 117-220 (538)
433 KOG1033|consensus 99.3 9.8E-14 2.1E-18 131.1 -3.9 137 72-329 330-478 (516)
434 KOG0601|consensus 99.3 6.4E-12 1.4E-16 120.8 7.0 279 2-320 120-472 (524)
435 KOG4158|consensus 99.2 8.6E-12 1.9E-16 114.2 5.1 145 57-318 275-461 (598)
436 KOG0615|consensus 99.2 2.7E-11 5.9E-16 111.3 7.0 112 99-227 280-446 (475)
437 TIGR01982 UbiB 2-polyprenylphe 99.1 6.7E-10 1.4E-14 107.5 11.1 125 2-155 123-290 (437)
438 PRK04750 ubiB putative ubiquin 99.1 2.1E-10 4.6E-15 112.7 7.5 30 2-31 125-154 (537)
439 cd05151 ChoK Choline Kinase (C 99.0 1E-09 2.2E-14 92.3 9.1 121 1-163 3-136 (170)
440 KOG0660|consensus 99.0 2.1E-10 4.5E-15 104.0 4.3 78 150-227 161-319 (359)
441 KOG0599|consensus 99.0 2E-10 4.3E-15 100.6 2.8 75 149-223 158-288 (411)
442 KOG0575|consensus 99.0 2.6E-10 5.7E-15 109.5 3.8 72 151-222 155-273 (592)
443 KOG0581|consensus 99.0 2.8E-10 6E-15 103.6 3.4 77 150-226 215-343 (364)
444 KOG0606|consensus 99.0 8.4E-11 1.8E-15 119.2 -0.5 233 3-347 811-1068(1205)
445 KOG1023|consensus 99.0 3.3E-10 7.2E-15 108.9 3.6 147 47-318 2-162 (484)
446 KOG0671|consensus 98.9 1.1E-09 2.4E-14 100.0 5.7 80 146-225 244-413 (415)
447 KOG0578|consensus 98.9 6.8E-10 1.5E-14 105.9 4.1 89 135-223 390-528 (550)
448 cd05146 RIO3_euk RIO kinase fa 98.9 6.6E-09 1.4E-13 89.2 9.3 132 2-167 3-177 (197)
449 KOG0588|consensus 98.9 2.5E-09 5.4E-14 103.8 7.0 105 100-226 117-271 (786)
450 KOG0033|consensus 98.9 1.2E-09 2.6E-14 94.4 3.8 74 150-223 149-272 (355)
451 KOG3087|consensus 98.8 5.2E-08 1.1E-12 81.3 11.6 132 1-163 12-165 (229)
452 COG3642 Mn2+-dependent serine/ 98.8 8.1E-08 1.8E-12 80.4 11.5 124 1-164 1-141 (204)
453 KOG0667|consensus 98.7 2.6E-08 5.7E-13 96.7 7.9 44 141-184 318-361 (586)
454 KOG0659|consensus 98.7 1.3E-08 2.7E-13 89.1 3.8 78 150-227 137-290 (318)
455 cd05154 ACAD10_11_like Acyl-Co 98.7 1.1E-07 2.5E-12 83.1 9.7 103 1-111 3-111 (223)
456 KOG0596|consensus 98.6 3.9E-08 8.5E-13 93.9 5.8 99 108-226 473-635 (677)
457 KOG0593|consensus 98.6 1.5E-08 3.3E-13 90.1 2.7 108 101-227 107-293 (396)
458 KOG0583|consensus 98.6 3.6E-08 7.9E-13 93.3 5.1 78 146-223 153-280 (370)
459 KOG0663|consensus 98.6 2.9E-08 6.2E-13 89.5 4.0 78 150-227 213-370 (419)
460 KOG0198|consensus 98.6 6.4E-08 1.4E-12 88.8 6.0 108 100-225 122-283 (313)
461 KOG0600|consensus 98.6 6.7E-08 1.5E-12 91.4 5.8 106 101-225 224-407 (560)
462 KOG0616|consensus 98.6 2.9E-08 6.3E-13 88.1 3.1 81 149-229 179-308 (355)
463 PF01163 RIO1: RIO1 family; I 98.6 3.1E-07 6.8E-12 78.5 9.1 122 11-166 1-158 (188)
464 KOG0032|consensus 98.6 1.5E-07 3.3E-12 89.2 7.8 74 151-224 176-299 (382)
465 KOG0579|consensus 98.6 6.7E-08 1.4E-12 93.6 5.1 78 150-227 166-298 (1187)
466 KOG0201|consensus 98.5 4E-08 8.6E-13 91.4 2.7 76 150-225 147-270 (467)
467 KOG0594|consensus 98.5 1.3E-07 2.9E-12 85.9 5.5 108 100-226 125-310 (323)
468 KOG1290|consensus 98.5 1.2E-07 2.5E-12 89.4 5.1 75 153-227 393-559 (590)
469 KOG0658|consensus 98.5 7.1E-08 1.5E-12 87.9 3.5 79 149-227 161-315 (364)
470 KOG0604|consensus 98.5 1.4E-07 3.1E-12 84.0 4.9 81 149-229 199-333 (400)
471 KOG0598|consensus 98.5 1.1E-07 2.5E-12 86.6 3.7 82 150-231 161-294 (357)
472 PTZ00284 protein kinase; Provi 98.5 2.2E-07 4.7E-12 91.2 5.8 35 193-227 413-447 (467)
473 KOG0690|consensus 98.5 1.2E-07 2.6E-12 85.2 3.5 81 149-229 303-435 (516)
474 PRK15123 lipopolysaccharide co 98.4 4E-06 8.6E-11 75.9 13.3 117 11-156 37-172 (268)
475 KOG0694|consensus 98.4 2.1E-07 4.5E-12 91.1 4.7 81 149-229 503-635 (694)
476 cd05571 STKc_PKB Catalytic dom 98.4 4.7E-07 1E-11 84.4 6.6 110 101-229 101-262 (323)
477 PTZ00036 glycogen synthase kin 98.4 3.6E-07 7.9E-12 89.0 5.2 34 192-225 325-358 (440)
478 cd07871 STKc_PCTAIRE3 Catalyti 98.4 9E-07 2E-11 80.9 7.1 30 192-221 259-288 (288)
479 KOG4279|consensus 98.4 7.4E-07 1.6E-11 87.5 6.5 77 150-226 712-840 (1226)
480 cd07868 STKc_CDK8 Catalytic do 98.3 7.1E-07 1.5E-11 82.7 5.8 29 193-221 289-317 (317)
481 cd07878 STKc_p38beta_MAPK11 Ca 98.3 9.4E-07 2E-11 82.9 6.6 76 150-225 154-305 (343)
482 PHA03209 serine/threonine kina 98.3 1.4E-06 3.1E-11 82.4 7.5 29 195-223 328-356 (357)
483 PHA03212 serine/threonine kina 98.3 1.5E-06 3.2E-11 83.4 7.5 33 193-225 351-383 (391)
484 KOG0592|consensus 98.3 5.9E-07 1.3E-11 85.8 4.6 81 149-229 209-349 (604)
485 cd07862 STKc_CDK6 Catalytic do 98.3 1.1E-06 2.4E-11 80.2 6.2 103 100-221 115-290 (290)
486 cd05612 STKc_PRKX_like Catalyt 98.3 5.4E-07 1.2E-11 82.6 4.2 78 150-227 137-263 (291)
487 cd07869 STKc_PFTAIRE1 Catalyti 98.3 8.3E-07 1.8E-11 81.8 5.1 34 193-226 263-296 (303)
488 cd07876 STKc_JNK2 Catalytic do 98.3 2.2E-06 4.7E-11 81.1 7.6 32 192-223 289-320 (359)
489 KOG4717|consensus 98.3 1.1E-06 2.4E-11 83.6 5.3 83 149-231 154-283 (864)
490 cd05600 STKc_Sid2p_Dbf2p Catal 98.3 2.1E-06 4.5E-11 80.3 7.2 78 150-227 137-266 (333)
491 PTZ00426 cAMP-dependent protei 98.3 7.7E-07 1.7E-11 83.6 4.3 80 149-228 166-294 (340)
492 cd05631 STKc_GRK4 Catalytic do 98.3 1.3E-06 2.8E-11 79.8 5.7 78 150-227 138-270 (285)
493 cd07874 STKc_JNK3 Catalytic do 98.3 2.2E-06 4.9E-11 80.8 7.4 32 193-224 286-317 (355)
494 KOG0601|consensus 98.3 1.8E-06 3.8E-11 83.7 6.6 190 1-221 270-517 (524)
495 PTZ00263 protein kinase A cata 98.2 8.2E-07 1.8E-11 83.0 4.2 78 150-227 154-280 (329)
496 cd05585 STKc_YPK1_like Catalyt 98.2 2E-06 4.3E-11 79.7 6.5 77 150-226 129-255 (312)
497 KOG1243|consensus 98.2 2.2E-06 4.7E-11 84.2 6.7 109 12-156 27-139 (690)
498 KOG0582|consensus 98.2 1.6E-06 3.6E-11 81.0 5.5 80 149-228 161-303 (516)
499 PLN03225 Serine/threonine-prot 98.2 3.2E-06 7E-11 84.7 8.0 33 195-227 427-459 (566)
500 cd05590 STKc_nPKC_eta Catalyti 98.2 1.7E-06 3.7E-11 80.5 5.5 78 150-227 132-262 (320)
No 1
>KOG0595|consensus
Probab=100.00 E-value=9.8e-46 Score=334.73 Aligned_cols=203 Identities=22% Similarity=0.319 Sum_probs=180.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||+|+||+||+|+++.++..||||.+.+. ....+....|+.+|+.++|+| ||+++|..+.++++|||||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~n------IV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPN------IVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcc------eeeEEEEEecCCeEEEEEE
Confidence 5799999999999999999999999999764 345677889999999999888 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|| ||||.++|++.+ .+++..++.++.||+.| +++||+++|+|||+||.||.|+-
T Consensus 90 yC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~a-----------------------lq~L~~~~IiHRDLKPQNiLLs~ 144 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRG--RLPEATARHFMQQLASA-----------------------LQFLHENNIIHRDLKPQNILLST 144 (429)
T ss_pred eCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeccCCcceEEecc
Confidence 99 999999999986 68999999999999888 99999999999999999999881
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
....
T Consensus 145 -----------~~~~----------------------------------------------------------------- 148 (429)
T KOG0595|consen 145 -----------TARN----------------------------------------------------------------- 148 (429)
T ss_pred -----------CCCC-----------------------------------------------------------------
Confidence 0000
Q ss_pred hhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
.....+||+|||+++.. .....+.+|+|.|||||++....|..|+|+||+|+++|++++|.+||.
T Consensus 149 -------------~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 149 -------------DTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred -------------CCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 00146899999999874 445578999999999999999999999999999999999999999999
Q ss_pred ccCCCceee
Q psy2006 316 RKTKTKYFY 324 (351)
Q Consensus 316 ~~~~~~~~~ 324 (351)
..+..|.+.
T Consensus 216 a~t~~eL~~ 224 (429)
T KOG0595|consen 216 AETPKELLL 224 (429)
T ss_pred ccCHHHHHH
Confidence 999888875
No 2
>KOG0615|consensus
Probab=100.00 E-value=5e-44 Score=323.52 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=186.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh--------hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK--------YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+.||.|+||.|-+|.++.+|+.||||++.+... ....+.+|+++|++|+||+ ||+++|+|+..+..
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~------IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPN------IVRIKDFFEVPDSS 251 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCC------EEEEeeeeecCCce
Confidence 579999999999999999999999999976321 2234679999999999988 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
||||||+ ||+|++++...+ .+.++.-|.++.|++.| +.|||++||+|||+||+|
T Consensus 252 YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~a-----------------------vkYLH~~GI~HRDiKPeN 306 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTA-----------------------VKYLHSQGIIHRDIKPEN 306 (475)
T ss_pred EEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHH-----------------------HHHHHHcCcccccCCcce
Confidence 9999999 999999999887 45566667777777766 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
|.|.+ .
T Consensus 307 ILl~~-----------~--------------------------------------------------------------- 312 (475)
T KOG0615|consen 307 ILLSN-----------D--------------------------------------------------------------- 312 (475)
T ss_pred EEecc-----------C---------------------------------------------------------------
Confidence 99872 0
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCCC---CCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELGW---AQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslG~~l~~l 307 (351)
...+.+||+|||++.+. ..-..+.||||.|.|||++.+.+. ..++|+||+||++|-+
T Consensus 313 ------------------~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc 374 (475)
T KOG0615|consen 313 ------------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC 374 (475)
T ss_pred ------------------CcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence 02478999999999885 556678999999999999987654 4578999999999999
Q ss_pred ccccccccccCCCce----eeecccCCcccccccccccccCccC
Q psy2006 308 YLGITLMARKTKTKY----FYHGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
++|.+||.+.....- +..|++.+....|. .|++++.+|
T Consensus 375 LsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~--~Iseea~dl 416 (475)
T KOG0615|consen 375 LSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD--RISEEALDL 416 (475)
T ss_pred eccCCCcccccCCccHHHHHhcCcccccChhhh--hhhHHHHHH
Confidence 999999999887763 34688777766665 788887765
No 3
>KOG0575|consensus
Probab=100.00 E-value=2.4e-43 Score=333.31 Aligned_cols=217 Identities=23% Similarity=0.345 Sum_probs=187.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecc----hhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKN----VEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+|+.||.+++..+|+.||+|++.+ ....++.+.+||+|.+.|+|+| ||+++++|++..++|||.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hpn------IV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPN------IVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCc------EEeeeeEeecCCceEEEE
Confidence 469999999999999999999999999976 3456788999999999999988 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
|.| .++|..++++.+ .+.|..|+-+++||+.| |.|||+.+|+|||+|-+|+.|.
T Consensus 98 ELC~~~sL~el~Krrk--~ltEpEary~l~QIv~G-----------------------lkYLH~~~IiHRDLKLGNlfL~ 152 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEG-----------------------LKYLHSLGIIHRDLKLGNLFLN 152 (592)
T ss_pred EecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHH-----------------------HHHHHhcCceecccchhheeec
Confidence 999 899999999765 56666666666666666 9999999999999999999987
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 153 -------------------------------------------------------------------------------- 152 (592)
T KOG0575|consen 153 -------------------------------------------------------------------------------- 152 (592)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...+|||+|||++.... ....+.||||.|.|||++...+++..+||||+||++|.|++|++|
T Consensus 153 ---------------~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PP 217 (592)
T KOG0575|consen 153 ---------------ENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPP 217 (592)
T ss_pred ---------------CcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCC
Confidence 34689999999998743 566789999999999999999999999999999999999999999
Q ss_pred ccccCCCceeeecccCCcccccccccccccCccC
Q psy2006 314 MARKTKTKYFYHGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 314 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
|...+-.++|..-+.+-..-+. .+|.+|++|
T Consensus 218 Fetk~vkety~~Ik~~~Y~~P~---~ls~~A~dL 248 (592)
T KOG0575|consen 218 FETKTVKETYNKIKLNEYSMPS---HLSAEAKDL 248 (592)
T ss_pred cccchHHHHHHHHHhcCccccc---ccCHHHHHH
Confidence 9999888888643332222222 677888776
No 4
>KOG0671|consensus
Probab=100.00 E-value=1.2e-42 Score=312.02 Aligned_cols=250 Identities=54% Similarity=0.927 Sum_probs=218.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g 81 (351)
.++|+|+||.|-.+.|++++..||+|++++...+++.+.-|+++|+++.+..|+|...++++.+||+-.+|+|||+|.+|
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG 174 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG 174 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC
Confidence 57999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCc
Q psy2006 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSA 161 (351)
Q Consensus 82 ~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s 161 (351)
.|++++|+..++.++|.+.++.++.||+.+ +.+||+.+++|.|+||.||.+++
T Consensus 175 ~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-----------------------v~fLh~~kl~HTDLKPENILfvs---- 227 (415)
T KOG0671|consen 175 LSTFDFLKENNYIPFPIDHIRHMGYQLLES-----------------------VAFLHDLKLTHTDLKPENILFVS---- 227 (415)
T ss_pred hhHHHHhccCCccccchHHHHHHHHHHHHH-----------------------HHHHHhcceeecCCChheEEEec----
Confidence 999999999999999999999999999999 99999999999999999999983
Q ss_pred ccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhc
Q psy2006 162 TFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
+...-++.+. .. ...
T Consensus 228 -------s~~~~~~~~k---~~-----------------------------------------------------~~~-- 242 (415)
T KOG0671|consen 228 -------SEYFKTYNPK---KK-----------------------------------------------------VCF-- 242 (415)
T ss_pred -------cceEEEeccC---Cc-----------------------------------------------------cce--
Confidence 1110000000 00 000
Q ss_pred cchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCCc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
........|+++|||.+++.....++.+.|..|+|||++++.+++.+.|+||+||+|+|+.||..+|.+.++.|
T Consensus 243 ------~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 243 ------IRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred ------eccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 00113568999999999998888889999999999999999999999999999999999999999999987433
Q ss_pred ------------------------eeeecccCCccccccc--ccccccCccCCC
Q psy2006 322 ------------------------YFYHGKLDWDEKGTAG--RYVRENCKPLHH 349 (351)
Q Consensus 322 ------------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 349 (351)
+|..|.++|++.+..+ ++|.+.||+|+.
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~ 370 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKK 370 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHH
Confidence 5567899999999877 999999999874
No 5
>KOG0598|consensus
Probab=100.00 E-value=1.1e-42 Score=312.03 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=174.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||.|+||+||.++.+.+++.||+|++++.. ...+.+..|.+||+.++|+. ||.+...|++.+++|||
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPF------iv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPF------IVKLIYSFQTEEKLYLV 103 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCc------EeeeEEecccCCeEEEE
Confidence 478999999999999999999999999998753 34567889999999999988 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
+||+ ||.|+-.|++.+ .++|+.|+-++..|+.| |.|||++||+|||+||+||+|
T Consensus 104 ld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lA-----------------------L~~LH~~gIiyRDlKPENILL 158 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLA-----------------------LGYLHSKGIIYRDLKPENILL 158 (357)
T ss_pred EeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHH-----------------------HHHHHhCCeeeccCCHHHeee
Confidence 9999 999999999876 46666666555555555 999999999999999999998
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 159 d------------------------------------------------------------------------------- 159 (357)
T KOG0598|consen 159 D------------------------------------------------------------------------------- 159 (357)
T ss_pred c-------------------------------------------------------------------------------
Confidence 7
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||+|... .....+.+||+.|||||++.+.+++..+|+||||+++|+|++|.+
T Consensus 160 ----------------~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~p 223 (357)
T KOG0598|consen 160 ----------------EQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKP 223 (357)
T ss_pred ----------------CCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCC
Confidence 3578999999999852 234456899999999999999999999999999999999999999
Q ss_pred cccccCCCceee
Q psy2006 313 LMARKTKTKYFY 324 (351)
Q Consensus 313 pf~~~~~~~~~~ 324 (351)
||.+.+..+.+.
T Consensus 224 PF~~~~~~~~~~ 235 (357)
T KOG0598|consen 224 PFYAEDVKKMYD 235 (357)
T ss_pred CCcCccHHHHHH
Confidence 999999777664
No 6
>KOG0667|consensus
Probab=100.00 E-value=1.2e-41 Score=324.72 Aligned_cols=207 Identities=32% Similarity=0.575 Sum_probs=193.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++.||.|+||.|-+|.|.++++.||||++++..........|+.+|..|+...+.+..|||+++|+|...+|+|||+|.+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL 270 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL 270 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence 36799999999999999999999999999998888888899999999998555567888999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
..+|.++++.....+++...++.++.|++.+ |.+||+.+|||.|+||+||+|.|-
T Consensus 271 ~~NLYellK~n~f~Glsl~~ir~~~~Qil~~-----------------------L~~L~~l~IIHcDLKPENILL~~~-- 325 (586)
T KOG0667|consen 271 STNLYELLKNNKFRGLSLPLVRKFAQQILTA-----------------------LLFLHELGIIHCDLKPENILLKDP-- 325 (586)
T ss_pred hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeccCChhheeeccC--
Confidence 9999999999998899999999999999999 999999999999999999999951
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 326 -------------------------------------------------------------------------------- 325 (586)
T KOG0667|consen 326 -------------------------------------------------------------------------------- 325 (586)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCC
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKT 320 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~ 320 (351)
.++.|||+|||++.+......+.+.+..|+|||+++|.+|+.+.|||||||+++||.+|.++|.|.+..
T Consensus 326 -----------~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 326 -----------KRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred -----------CcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 246899999999999888888889999999999999999999999999999999999999999999988
Q ss_pred cee
Q psy2006 321 KYF 323 (351)
Q Consensus 321 ~~~ 323 (351)
+.+
T Consensus 395 DQl 397 (586)
T KOG0667|consen 395 DQL 397 (586)
T ss_pred HHH
Confidence 876
No 7
>KOG0616|consensus
Probab=100.00 E-value=1.8e-41 Score=295.41 Aligned_cols=215 Identities=21% Similarity=0.364 Sum_probs=189.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++-||.|+||+|-+++.+.+|.+||+|++++.. ...+++.+|.++|+.+.|+. ++.|+..|.+.++++||
T Consensus 49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PF------lv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPF------LVKLYGTFKDNSNLYMV 122 (355)
T ss_pred eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCce------eEEEEEeeccCCeEEEE
Confidence 356999999999999999999999999998753 45677889999999999888 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ ||.|+.++++.+ ++++..++-++.|++.| |+|||+.++++||+||+|++|
T Consensus 123 meyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlA-----------------------leylH~~~iiYRDLKPENiLl 177 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLA-----------------------LEYLHSLDIIYRDLKPENLLL 177 (355)
T ss_pred EeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHH-----------------------HHHHHhcCeeeccCChHHeee
Confidence 9999 999999999986 56666666666666555 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 178 D------------------------------------------------------------------------------- 178 (355)
T KOG0616|consen 178 D------------------------------------------------------------------------------- 178 (355)
T ss_pred c-------------------------------------------------------------------------------
Confidence 7
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+||+|||++........+.||||.|+|||++...+++.++|+|+||+++|||+.|.+||.
T Consensus 179 ----------------~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 179 ----------------QNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred ----------------cCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 4678999999999988777888999999999999999999999999999999999999999999
Q ss_pred ccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 316 RKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 316 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
..+..++|. +|++.|+. +++.++|+|
T Consensus 243 ~~~~~~iY~KI~~~~v~fP~------~fs~~~kdL 271 (355)
T KOG0616|consen 243 DDNPIQIYEKILEGKVKFPS------YFSSDAKDL 271 (355)
T ss_pred CCChHHHHHHHHhCcccCCc------ccCHHHHHH
Confidence 999988875 67777764 455555554
No 8
>KOG0605|consensus
Probab=100.00 E-value=2.7e-41 Score=314.92 Aligned_cols=261 Identities=22% Similarity=0.309 Sum_probs=185.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
|..||+||||.||+|+-+.+|++||+|+++++. ...+++..|-++|....++. ||+|+-.|.+..++|||
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~------vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPW------VVKLYYSFQDKEYLYLI 219 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCc------EEEEEEEecCCCeeEEE
Confidence 468999999999999999999999999998764 45678899999999977666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC---
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD--- 152 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n--- 152 (351)
|||+ |||+..+|.+.+ .++ ++.++.|+.+++.|++-+|+.|++||||||.|
T Consensus 220 MEylPGGD~mTLL~~~~--~L~-----------------------e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi 274 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD--TLT-----------------------EDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI 274 (550)
T ss_pred EEecCCccHHHHHHhcC--cCc-----------------------hHHHHHHHHHHHHHHHHHHHcCcccccCChhheee
Confidence 9999 999999999987 344 55555555555555999999999999999876
Q ss_pred -----eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 153 -----IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 153 -----i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
++|+|||+|......+.... |. -+.. ....+ -...|.++++.. . .
T Consensus 275 D~~GHiKLSDFGLs~gl~~~~~~~~----~~-~~~~----------~~~~~---~~~~~~~~~~~~----~--------~ 324 (550)
T KOG0605|consen 275 DAKGHIKLSDFGLSTGLDKKHRIES----YR-LDEQ----------MQINL---SEAKPSDFPKFN----T--------P 324 (550)
T ss_pred cCCCCEeeccccccchhhhhhhhhh----hc-chhh----------hhhhh---ccCCCccccccc----c--------c
Confidence 69999999965433322100 00 0000 00000 000111111100 0 0
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
.....+...-..| ... ......+.+|||-|+|||++.+.+|+...|+|||||++|||
T Consensus 325 ~~~~~~~~~~~~w-----------~~n------------rr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm 381 (550)
T KOG0605|consen 325 RSTMSRREQLQTW-----------KRN------------RRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM 381 (550)
T ss_pred cchhhHHHHHHHH-----------Hhh------------hhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH
Confidence 0000000000000 000 11123457999999999999999999999999999999999
Q ss_pred ccccccccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 308 YLGITLMARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+.|.+||.+.+..+++. +++..|...... .++++|+||
T Consensus 382 LvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~--~~s~eA~DL 422 (550)
T KOG0605|consen 382 LVGYPPFCSETPQETYRKIVNWRETLKFPEEV--DLSDEAKDL 422 (550)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhhhccCCCcC--cccHHHHHH
Confidence 99999999999999985 566666666555 677888886
No 9
>KOG0600|consensus
Probab=100.00 E-value=6.3e-41 Score=310.16 Aligned_cols=199 Identities=22% Similarity=0.402 Sum_probs=173.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~l 75 (351)
|++||+|+||.||+|++..+|+.||+|.+..+. .....+.+||.||++|.|+| |++|.+..... +.+||
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpN------IikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPN------IIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCc------ccceeeEEEecCCceEEE
Confidence 578999999999999999999999999997653 34457789999999999988 99999999987 59999
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|+|||..||.-++..-. +.|.+.++|.+|.||+.| |+|||++||+|||||.+||.|
T Consensus 196 VFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~G-----------------------l~~cH~~gvlHRDIK~SNiLi 251 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEG-----------------------LEYCHSRGVLHRDIKGSNILI 251 (560)
T ss_pred EEecccchhhhhhcCCC-cccChHHHHHHHHHHHHH-----------------------HHHHhhcCeeeccccccceEE
Confidence 99999999999887654 566777777777777666 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 252 d------------------------------------------------------------------------------- 252 (560)
T KOG0600|consen 252 D------------------------------------------------------------------------------- 252 (560)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.+||+|||++++... ..+..+-|.+|+|||+++|. .|+.++|+||+||++.||.+|
T Consensus 253 ----------------n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 253 ----------------NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred ----------------CCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 467899999999986332 34667889999999999985 689999999999999999999
Q ss_pred cccccccCCCceee
Q psy2006 311 ITLMARKTKTKYFY 324 (351)
Q Consensus 311 ~~pf~~~~~~~~~~ 324 (351)
++.|.+.+..+.+.
T Consensus 317 kPI~~G~tEveQl~ 330 (560)
T KOG0600|consen 317 KPILQGRTEVEQLH 330 (560)
T ss_pred CCCcCCccHHHHHH
Confidence 99999999888763
No 10
>KOG0593|consensus
Probab=100.00 E-value=3e-41 Score=294.75 Aligned_cols=199 Identities=24% Similarity=0.398 Sum_probs=178.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
|.++|+|+||+||+|+++.+|+.||||++..++ ...+-+.+|+++|++|.|+| +|.|+++|...+.++||+
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~N------LVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHEN------LVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccch------HHHHHHHHHhcceeEEEe
Confidence 357999999999999999999999999997543 23456789999999999988 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|||..++.+-+.+.. .++|.+.++.++.|++.| +.|||+.+++|||+||.||.++
T Consensus 81 E~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~a-----------------------i~~cHk~n~IHRDIKPENILit- 135 (396)
T KOG0593|consen 81 EYCDHTVLHELERYP-NGVPSELVKKYLYQLLKA-----------------------IHFCHKNNCIHRDIKPENILIT- 135 (396)
T ss_pred eecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------hhhhhhcCeecccCChhheEEe-
Confidence 999999999998886 478999999999999998 9999999999999999999988
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (396)
T KOG0593|consen 136 -------------------------------------------------------------------------------- 135 (396)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.+||||||+++... ..-+..+.|.||+|||++.+ .+|+.++|||++||++.||++|+++
T Consensus 136 --------------~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL 201 (396)
T KOG0593|consen 136 --------------QNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPL 201 (396)
T ss_pred --------------cCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcC
Confidence 35789999999998743 22345788999999999998 7899999999999999999999999
Q ss_pred ccccCCCceee
Q psy2006 314 MARKTKTKYFY 324 (351)
Q Consensus 314 f~~~~~~~~~~ 324 (351)
|.|.++-+.++
T Consensus 202 ~PG~SDiDQLy 212 (396)
T KOG0593|consen 202 WPGRSDIDQLY 212 (396)
T ss_pred CCCcchHHHHH
Confidence 99999888765
No 11
>KOG0581|consensus
Probab=100.00 E-value=1.8e-39 Score=291.44 Aligned_cols=191 Identities=20% Similarity=0.284 Sum_probs=171.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEec--chhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-eEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIK--NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-HMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~--~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-~~~lV~ 77 (351)
+..||+|+.|+||+++++.+++.+|+|++. .++..++.+.+|+++++...|++ ||..++.|..++ .++|+|
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spy------IV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPY------IVGFYGAFYSNGEEISICM 157 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCC------eeeEeEEEEeCCceEEeeh
Confidence 356999999999999999999999999994 34566788899999999998777 999999999999 599999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEE
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRL 155 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l 155 (351)
||| +|||.++++..+ ++||..+-+++.+++.| |.|||. ++|+|||+||.|+.+
T Consensus 158 EYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~G-----------------------L~YLh~~~~IIHRDIKPsNlLv 212 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRG-----------------------LSYLHEERKIIHRDIKPSNLLV 212 (364)
T ss_pred hhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHhhccCeeeccCCHHHeee
Confidence 999 999999998874 67888877777777777 999995 999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 213 N------------------------------------------------------------------------------- 213 (364)
T KOG0581|consen 213 N------------------------------------------------------------------------------- 213 (364)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcce-eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATF-DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
..+.|||+|||.+.. .+....+.+||..|||||.+.+..|+.++||||||++++|+++|++||
T Consensus 214 ----------------skGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~ 277 (364)
T KOG0581|consen 214 ----------------SKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPY 277 (364)
T ss_pred ----------------cCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCC
Confidence 468899999999876 344568899999999999999999999999999999999999999999
Q ss_pred ccc
Q psy2006 315 ARK 317 (351)
Q Consensus 315 ~~~ 317 (351)
...
T Consensus 278 ~~~ 280 (364)
T KOG0581|consen 278 PPP 280 (364)
T ss_pred CCc
Confidence 885
No 12
>KOG0591|consensus
Probab=100.00 E-value=2.3e-41 Score=292.86 Aligned_cols=195 Identities=22% Similarity=0.257 Sum_probs=170.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeee-eEeeCCe-EEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLD-WFDYHGH-MCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~-~f~~~~~-~~l 75 (351)
+++||.|+||+||++.+..+|+.||.|.+.-. ...++....|+.+|++|+|+| ||+.++ .|..+.. ++|
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpN------IVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPN------IVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCch------HHHHHHHhhhccchhhHH
Confidence 36899999999999999999999999999632 345667788999999999988 999999 7777776 999
Q ss_pred EEecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc--cc--cccccc
Q psy2006 76 AFEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK--KK--REVRRV 148 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~--~~--i~h~d~ 148 (351)
|||+| +|||.+.++.. ....+||..|++++.|++.| |..||+ .. |+|||+
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~A-----------------------L~~cH~~~~r~~VmHRDI 154 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRA-----------------------LYHCHSKIPRGTVMHRDI 154 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHH-----------------------HHHHhccccccceeeccC
Confidence 99999 99999999876 33467888888888888888 999998 45 899999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
||.||.|.
T Consensus 155 KPaNIFl~------------------------------------------------------------------------ 162 (375)
T KOG0591|consen 155 KPANIFLT------------------------------------------------------------------------ 162 (375)
T ss_pred cchheEEc------------------------------------------------------------------------
Confidence 99999987
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
..+.|||+|||++++... -..+.+|||.||+||.+.+.+|+.++||||+||++|
T Consensus 163 -----------------------~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGClly 219 (375)
T KOG0591|consen 163 -----------------------ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLY 219 (375)
T ss_pred -----------------------CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHH
Confidence 357899999999987433 335789999999999999999999999999999999
Q ss_pred eeccccccccccCC
Q psy2006 306 ELYLGITLMARKTK 319 (351)
Q Consensus 306 ~l~tG~~pf~~~~~ 319 (351)
||+.-++||.+++=
T Consensus 220 EMcaL~~PF~g~n~ 233 (375)
T KOG0591|consen 220 EMCALQSPFYGDNL 233 (375)
T ss_pred HHHhcCCCcccccH
Confidence 99999999999853
No 13
>KOG0661|consensus
Probab=100.00 E-value=2.7e-39 Score=297.47 Aligned_cols=196 Identities=24% Similarity=0.366 Sum_probs=170.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHH--HHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCC-eEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREA--ARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHG-HMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~--~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~-~~~lV 76 (351)
+++||.|.||+||+|+.+++++.||||.+++.-...++ -.||++.|++|. |+| ||.|.+++.+++ ++++|
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpn------iikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPN------IIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCc------chhhHHHhhccCceEeee
Confidence 47899999999999999999999999999865322232 368999999998 666 999999999999 99999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe---
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI--- 153 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni--- 153 (351)
||||..+|+++|+.+ ...|++..++.|+.||+.| |+|+|.+|+.|||+||+||
T Consensus 89 fE~Md~NLYqLmK~R-~r~fse~~irnim~QilqG-----------------------L~hiHk~GfFHRDlKPENiLi~ 144 (538)
T KOG0661|consen 89 FEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQG-----------------------LAHIHKHGFFHRDLKPENILIS 144 (538)
T ss_pred HHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHH-----------------------HHHHHhcCcccccCChhheEec
Confidence 999999999999998 4789999999999999988 9999999999999999885
Q ss_pred -----EEeecCCccc--CCCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 154 -----RLIDFGSATF--DDEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 154 -----~l~Dfg~s~~--~~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
||+|||+|++ ...+.+.+..|.||+|||.+...
T Consensus 145 ~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~ 224 (538)
T KOG0661|consen 145 GNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE 224 (538)
T ss_pred ccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH
Confidence 8889999987 56778889999999999954321
Q ss_pred -----------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 187 -----------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 187 -----------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
.+..+.++.++|.+||.|||++||||+++|+||||+....
T Consensus 225 VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 225 VLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 1124467889999999999999999999999999976443
No 14
>KOG0659|consensus
Probab=100.00 E-value=1.6e-39 Score=279.34 Aligned_cols=215 Identities=23% Similarity=0.364 Sum_probs=182.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhh---hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY---REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||+|+||.||+|++.++|+.||||.++..+.. ...+.+||+.|+.+.|+| |+.|+|+|...+.+-||+
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~n------Ii~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPN------IIELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcc------hhhhhhhccCCCceEEEE
Confidence 46899999999999999999999999999865322 457899999999999888 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||+..+|...++... +.+....++.++.+++.| ++|||++.|+|||+||.|+.++
T Consensus 81 Efm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkG-----------------------l~y~H~~~IlHRDlKPnNLLis- 135 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKG-----------------------LAYCHSKWILHRDLKPNNLLIS- 135 (318)
T ss_pred EeccccHHHHhcccc-cccCHHHHHHHHHHHHHH-----------------------HHHHHhhhhhcccCCccceEEc-
Confidence 999999999998876 567777778877777777 9999999999999999999887
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (318)
T KOG0659|consen 136 -------------------------------------------------------------------------------- 135 (318)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecccc---ccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH---STIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.+||+|||+++....+. ...+-|.+|+|||+++| +.|+..+|+||+||++.||+.|.+.
T Consensus 136 --------------~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~ 201 (318)
T KOG0659|consen 136 --------------SDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPF 201 (318)
T ss_pred --------------CCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCC
Confidence 35789999999998754333 23467899999999998 4689999999999999999999999
Q ss_pred ccccCCCceee-----ecc---cCCcccccccccc
Q psy2006 314 MARKTKTKYFY-----HGK---LDWDEKGTAGRYV 340 (351)
Q Consensus 314 f~~~~~~~~~~-----~~~---~~~~~~~~~~~~~ 340 (351)
|.|.++-+.+. -|. -.|++-..+.+|+
T Consensus 202 fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 202 FPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred CCCCchHHHHHHHHHHcCCCCcccCccccccccHH
Confidence 99999888763 122 2566666655554
No 15
>KOG1290|consensus
Probab=100.00 E-value=2.1e-38 Score=292.05 Aligned_cols=299 Identities=26% Similarity=0.399 Sum_probs=200.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCC--CCcceeeeeeeEeeCC----eEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPN--GRHLCVKMLDWFDYHG----HMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~--g~~~Iv~l~~~f~~~~----~~~ 74 (351)
.+|||=|.|+|||+|-|.+.+++||+||++.++.+.+.+..||++|++++..+|+ |+..||+|+|.|...+ |+|
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 3799999999999999999999999999999999999999999999999876643 8889999999999877 999
Q ss_pred EEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCe
Q psy2006 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni 153 (351)
||+|++|.+|..+|+...+.++|...||.|++|++.| |+|||++ ||+|.|+||.||
T Consensus 163 MVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~G-----------------------LdYLH~ecgIIHTDlKPENv 219 (590)
T KOG1290|consen 163 MVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTG-----------------------LDYLHRECGIIHTDLKPENV 219 (590)
T ss_pred EEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHH-----------------------HHHHHHhcCccccCCCccee
Confidence 9999999999999999999999999999999999999 9999975 899999999999
Q ss_pred EEeecCC--cccCCCCcccccCCCCccCCccccCCCh--------hhHHHHHHHHHHhhcc-------------------
Q psy2006 154 RLIDFGS--ATFDDEHHSTIVSTRHYRAPERYMASDD--------EEHRQLFDLISKMLEY------------------- 204 (351)
Q Consensus 154 ~l~Dfg~--s~~~~~~~~~~~~~~~~~~pe~~~~~~~--------~~~~~~~~~i~~~L~~------------------- 204 (351)
.|+-=.+ ++....- ........-..|........ ..+-.....+++.++.
T Consensus 220 Ll~~~e~~~~~~~~~a-~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~ 298 (590)
T KOG1290|consen 220 LLCSTEIDPAKDAREA-GEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEP 298 (590)
T ss_pred eeeccccchhhhhhhh-ccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccc
Confidence 8873211 1110000 00000000111121111100 0000111111111110
Q ss_pred -----CCCCC----------CChhhhh-cCCCCCCCCchh----------------hhcccchhhhhh-----------c
Q psy2006 205 -----EPSER----------ISLSEAL-RHPFFDKLPSSV----------------RVHAQTQADRIL-----------S 241 (351)
Q Consensus 205 -----~p~~R----------~t~~e~l-~~~~~~~~~~~~----------------~~~~~~~~~~~~-----------~ 241 (351)
+...| .+..+.- .+-.-..+.... +........... .
T Consensus 299 ~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~ 378 (590)
T KOG1290|consen 299 NQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNP 378 (590)
T ss_pred cccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccccccc
Confidence 00111 1111000 000000000000 000000000000 0
Q ss_pred cchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCCc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
..++......+...|||+|||.+.-.....+.-+.|..|+|||++++.+|++.+||||++|++|||+||.++|+++.+..
T Consensus 379 ~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~ 458 (590)
T KOG1290|consen 379 LVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGEN 458 (590)
T ss_pred ccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCC
Confidence 11111122334557899999998776767777888999999999999999999999999999999999999999998887
Q ss_pred ee
Q psy2006 322 YF 323 (351)
Q Consensus 322 ~~ 323 (351)
|-
T Consensus 459 Y~ 460 (590)
T KOG1290|consen 459 YS 460 (590)
T ss_pred CC
Confidence 54
No 16
>KOG0583|consensus
Probab=100.00 E-value=3.4e-39 Score=303.58 Aligned_cols=198 Identities=25% Similarity=0.389 Sum_probs=173.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----h--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----E--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||+|+||+|++|.+..+++.||+|++.+. . ...+.+.+|+.+|+.+. |+| |+++++++....+++
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~Hpn------I~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPN------IIRLLEVFATPTKIY 96 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCC------EeEEEEEEecCCeEE
Confidence 5799999999999999999999999988753 1 23456678999999998 777 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+||||| ||+|++++...+ ++.|..++.+++|++.| ++|||++||+|||+|++|+
T Consensus 97 ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisa-----------------------v~y~H~~gi~HRDLK~ENi 151 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISA-----------------------VAYCHSRGIVHRDLKPENI 151 (370)
T ss_pred EEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHH-----------------------HHHHHhCCEeeCCCCHHHE
Confidence 999999 889999999944 67788888888888877 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.|.+
T Consensus 152 lld~---------------------------------------------------------------------------- 155 (370)
T KOG0583|consen 152 LLDG---------------------------------------------------------------------------- 155 (370)
T ss_pred EecC----------------------------------------------------------------------------
Confidence 9872
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCC-C-CCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELG-W-AQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DiwslG~~l~~l~ 308 (351)
...++||+|||++... .....+.+|||.|+|||++.+.+ | +.++|+||+|+++|.|+
T Consensus 156 ------------------~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml 217 (370)
T KOG0583|consen 156 ------------------NEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLL 217 (370)
T ss_pred ------------------CCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHH
Confidence 1168999999998765 34567899999999999999988 8 68899999999999999
Q ss_pred cccccccccCCCceee
Q psy2006 309 LGITLMARKTKTKYFY 324 (351)
Q Consensus 309 tG~~pf~~~~~~~~~~ 324 (351)
+|..||+..+....+.
T Consensus 218 ~G~~PF~d~~~~~l~~ 233 (370)
T KOG0583|consen 218 CGRLPFDDSNVPNLYR 233 (370)
T ss_pred hCCCCCCCccHHHHHH
Confidence 9999999977666664
No 17
>KOG0610|consensus
Probab=100.00 E-value=1e-38 Score=289.39 Aligned_cols=269 Identities=19% Similarity=0.243 Sum_probs=190.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|.-|+||+|..+.++..+|+|++.+.. ....++..|..||+.+.|+. +++||..|+.+..+|+|
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPF------lPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPF------LPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCc------cchhhheeeccceeEEE
Confidence 467999999999999999999999999998753 33457788999999999998 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC---
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD--- 152 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n--- 152 (351)
|||| ||+|+.+.+++....+++..||-++..++.| |+|||-.||+.||+||+|
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~A-----------------------LEYLHmlGivYRDLKPENILv 212 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLA-----------------------LEYLHMLGIVYRDLKPENILV 212 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHH-----------------------HHHHHhhceeeccCCcceeEE
Confidence 9999 9999999999987777777777666666666 999999999999999887
Q ss_pred -----eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCC-CCCc
Q psy2006 153 -----IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD-KLPS 226 (351)
Q Consensus 153 -----i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~-~~~~ 226 (351)
|+|+||.+|.......+- ..+ ..|+.-.. +|..+. .+..-|. ....
T Consensus 213 redGHIMLsDFDLS~~~~~~Pt~-~~s---~~~~~~~~-------------------~~~~~~-----~~~s~f~~r~~~ 264 (459)
T KOG0610|consen 213 REDGHIMLSDFDLSLRCPVSPTL-VKS---SSPRSSGS-------------------QPSCRS-----RQPSCFSPRCLS 264 (459)
T ss_pred ecCCcEEeeeccccccCCCCCee-ecc---CCCCCCCC-------------------Cccccc-----ccccccccchhc
Confidence 499999999553211110 000 00000000 000000 0000000 0000
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
.... ..+... ... ....--.+...+....+++||-.|.|||++.|.+.+.++|+|+||+++||
T Consensus 265 ~~~~--------~~k~~~--------~~~-~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYE 327 (459)
T KOG0610|consen 265 SSKK--------RKKKDE--------SAS-RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYE 327 (459)
T ss_pred cccc--------cccccc--------ccc-ccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHH
Confidence 0000 000000 000 00000011123344578999999999999999999999999999999999
Q ss_pred eccccccccccCCCceeee---cccCCcccccccccccccCccC
Q psy2006 307 LYLGITLMARKTKTKYFYH---GKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
|+.|..||.|.+..+++.+ ..+.|.+.+ .|+-+||||
T Consensus 328 mLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~----~vs~~akDL 367 (459)
T KOG0610|consen 328 MLYGTTPFKGSNNKETLRNIVGQPLKFPEEP----EVSSAAKDL 367 (459)
T ss_pred HHhCCCCcCCCCchhhHHHHhcCCCcCCCCC----cchhHHHHH
Confidence 9999999999999999864 677787776 467777776
No 18
>KOG0597|consensus
Probab=100.00 E-value=2.4e-39 Score=302.68 Aligned_cols=195 Identities=27% Similarity=0.416 Sum_probs=175.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|.||+||+|+.+.+.+.||||.+.+. +..-+.+.+|++|++.|+|+| |+.++++|+...|+|+|.|
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpn------iv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPN------IVEMLESFETSAHLWVVTE 81 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcc------hhhHHHhhcccceEEEEeh
Confidence 6799999999999999999999999999864 334467899999999999988 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
||-|+|+.++...+ .+||++|+.++.++..| |.|||+.+|+|||+||.||.|.
T Consensus 82 ~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsa-----------------------L~yLhs~rilhrd~kPqniLl~-- 134 (808)
T KOG0597|consen 82 YAVGDLFTILEQDG--KLPEEQVRAIAYDLVSA-----------------------LYYLHSNRILHRDMKPQNILLE-- 134 (808)
T ss_pred hhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHH-----------------------HHHHHhcCcccccCCcceeeec--
Confidence 99669999998876 69999999999999998 9999999999999999999887
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (808)
T KOG0597|consen 135 -------------------------------------------------------------------------------- 134 (808)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+|++|||+++. .+...++..|||.|||||++.+.+|+..+|+||+||++||+.+|++||.
T Consensus 135 -------------~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 135 -------------KGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred -------------CCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 346799999999976 3345577899999999999999999999999999999999999999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
...-...
T Consensus 202 a~si~~L 208 (808)
T KOG0597|consen 202 ARSITQL 208 (808)
T ss_pred HHHHHHH
Confidence 7764443
No 19
>KOG0588|consensus
Probab=100.00 E-value=3e-39 Score=307.19 Aligned_cols=214 Identities=22% Similarity=0.369 Sum_probs=184.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+-||.|+-|.|.+|++.+||+.+|||++.+. ......+.+||-||+.+.|+| |+++||+|+...++|+|.
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~Hpn------Vl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPN------VLRLYDVWENKQHLYLVL 91 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCC------eeeeeeeeccCceEEEEE
Confidence 3589999999999999999999999999764 233467889999999999888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ ||.|++++.+.+ ++++..+..++.||+.| +.|||..+|+|||+|+.|+.|.
T Consensus 92 Eyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~g-----------------------v~yCH~~~icHRDLKpENlLLd 146 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG--PLPEREAAHFFRQILDG-----------------------VSYCHAFNICHRDLKPENLLLD 146 (786)
T ss_pred EecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHH-----------------------HHHHhhhcceeccCCchhhhhh
Confidence 999 999999999987 56777777766666666 9999999999999999998876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 147 -------------------------------------------------------------------------------- 146 (786)
T KOG0588|consen 147 -------------------------------------------------------------------------------- 146 (786)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcce--eccccccccccceeeCceeeecCCC-CCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++||+||||+.. .+....+.||+|.|.|||++.|.+| +.++||||+|+++|.|+||..|
T Consensus 147 ---------------~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LP 211 (786)
T KOG0588|consen 147 ---------------VKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLP 211 (786)
T ss_pred ---------------cccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCC
Confidence 235599999999976 5667788999999999999999999 8999999999999999999999
Q ss_pred ccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 314 MARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 314 f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
|++++-..++. .|.+.-+ .+|+.+|.+|
T Consensus 212 FdDdNir~LLlKV~~G~f~MP------s~Is~eaQdL 242 (786)
T KOG0588|consen 212 FDDDNIRVLLLKVQRGVFEMP------SNISSEAQDL 242 (786)
T ss_pred CCCccHHHHHHHHHcCcccCC------CcCCHHHHHH
Confidence 99877777664 5777654 3566666554
No 20
>KOG0594|consensus
Probab=100.00 E-value=2.9e-38 Score=283.21 Aligned_cols=200 Identities=21% Similarity=0.295 Sum_probs=174.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh---hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------ 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------ 71 (351)
+++||+|+||+||+|+++.+|+.||+|.+..... ....+.+|+.+|+.|+|+|+ |+.|+|++....
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~-----iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANH-----IVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcc-----eEEEEeeeeecccccccc
Confidence 4689999999999999999999999999986533 34567899999999998774 999999999887
Q ss_pred eEEEEEeccCCCHHHHHHhcCC--CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 72 HMCIAFEILGLSVFDFLKENNY--LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 72 ~~~lV~E~~g~sL~~~l~~~~~--~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
.+++||||+..+|.++|..... ..++...++.+++||+.| |+|||+++|+|||+|
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g-----------------------l~~~H~~~IlHRDLK 147 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG-----------------------LAFLHSHGILHRDLK 147 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecccCC
Confidence 8999999999999999998763 356777888888888888 999999999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
|.|+.+.
T Consensus 148 PQNlLi~------------------------------------------------------------------------- 154 (323)
T KOG0594|consen 148 PQNLLIS------------------------------------------------------------------------- 154 (323)
T ss_pred cceEEEC-------------------------------------------------------------------------
Confidence 9999987
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecC-CCCCccceeeeeeeeE
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIF 305 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~ 305 (351)
..+.+||+|||+++... ...+.-++|.+|+|||++.+. .|+...||||+||+++
T Consensus 155 ----------------------~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa 212 (323)
T KOG0594|consen 155 ----------------------SSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA 212 (323)
T ss_pred ----------------------CCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence 24679999999987533 334556789999999999986 6899999999999999
Q ss_pred eeccccccccccCCCcee
Q psy2006 306 ELYLGITLMARKTKTKYF 323 (351)
Q Consensus 306 ~l~tG~~pf~~~~~~~~~ 323 (351)
||++++++|.+.++.+..
T Consensus 213 Em~~~~~LFpG~se~~ql 230 (323)
T KOG0594|consen 213 EMFTRRPLFPGDSEIDQL 230 (323)
T ss_pred HHHhCCCCCCCCcHHHHH
Confidence 999999999999887665
No 21
>KOG0592|consensus
Probab=100.00 E-value=2.2e-38 Score=295.53 Aligned_cols=197 Identities=20% Similarity=0.310 Sum_probs=167.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+|++|++|+++.+++.|||||+.+.. ...+-+.+|-.+|.+| .|+. |++|+-.|.+...+|+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPg------ivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPG------IVKLYFTFQDEESLYFV 152 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCC------eEEEEEEeecccceEEE
Confidence 57999999999999999999999999998643 3345578899999999 5555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
+||+ +|+|.++|++.+ .|++..+|-++.||+.| |+|||+.||+|||+||+||.|
T Consensus 153 Le~A~nGdll~~i~K~G--sfde~caR~YAAeIldA-----------------------leylH~~GIIHRDlKPENILL 207 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDA-----------------------LEYLHSNGIIHRDLKPENILL 207 (604)
T ss_pred EEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHH-----------------------HHHHHhcCceeccCChhheeE
Confidence 9999 999999999986 57777777777777776 999999999999999999876
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 208 d------------------------------------------------------------------------------- 208 (604)
T KOG0592|consen 208 D------------------------------------------------------------------------------- 208 (604)
T ss_pred c-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceec----------------cccccccccceeeCceeeecCCCCCccceee
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD----------------EHHSTIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
....++|+|||.+...+ ....+++||..|.+||++.....++.+|+|+
T Consensus 209 ----------------~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWA 272 (604)
T KOG0592|consen 209 ----------------KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWA 272 (604)
T ss_pred ----------------CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHH
Confidence 24567777777765411 1124589999999999999999999999999
Q ss_pred eeeeeEeeccccccccccCCCceee
Q psy2006 300 IGCIIFELYLGITLMARKTKTKYFY 324 (351)
Q Consensus 300 lG~~l~~l~tG~~pf~~~~~~~~~~ 324 (351)
|||++|+|+.|.+||.+.+.--+|.
T Consensus 273 lGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 273 LGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred HHHHHHHHhcCCCCCccccHHHHHH
Confidence 9999999999999999888766664
No 22
>KOG0611|consensus
Probab=100.00 E-value=2.2e-38 Score=286.16 Aligned_cols=193 Identities=21% Similarity=0.358 Sum_probs=172.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|.||.|-+|.+...|+.||||.++++. .+--++.+||.||+.|+|+| |++++++|+..+.++|||
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPh------II~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPH------IIQIYEVFENKDKIVIVM 132 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCc------eeehhhhhcCCceEEEEE
Confidence 57999999999999999999999999998754 23346789999999999999 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||. +|.|+|++.+++ .+++..++.+++||..| +.|||..+++|||+|..||.|.
T Consensus 133 EYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSA-----------------------VhYCHknrVvHRDLKLENILLD 187 (668)
T KOG0611|consen 133 EYASGGELYDYISERG--SLSEREARHFFRQIVSA-----------------------VHYCHKNRVVHRDLKLENILLD 187 (668)
T ss_pred EecCCccHHHHHHHhc--cccHHHHHHHHHHHHHH-----------------------HHHHhhccceecccchhheeec
Confidence 999 999999999986 57777777777777777 9999999999999999999887
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 188 -------------------------------------------------------------------------------- 187 (668)
T KOG0611|consen 188 -------------------------------------------------------------------------------- 187 (668)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCCC-CCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+++||+|||++... ..-..++||+|.|.+||++.+.+| ++.+|.||||+++|.|+.|..|
T Consensus 188 ---------------~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP 252 (668)
T KOG0611|consen 188 ---------------QNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP 252 (668)
T ss_pred ---------------CCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence 3678999999998663 344578999999999999999999 8899999999999999999999
Q ss_pred ccccCCC
Q psy2006 314 MARKTKT 320 (351)
Q Consensus 314 f~~~~~~ 320 (351)
|+|.+-.
T Consensus 253 FDG~Dhk 259 (668)
T KOG0611|consen 253 FDGRDHK 259 (668)
T ss_pred cCCchHH
Confidence 9998743
No 23
>KOG0660|consensus
Probab=100.00 E-value=8e-38 Score=279.85 Aligned_cols=197 Identities=24% Similarity=0.448 Sum_probs=172.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecc---hhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC-----Ce
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKN---VEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH-----GH 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~-----~~ 72 (351)
++.||.|+||.|+.|.++.+|+.||||.+.. .....++..+|+++|++++|+| |+.++|.+..+ ..
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeN------Ii~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHEN------IIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCC------cceEEeecccccccccce
Confidence 4679999999999999999999999999974 2455678899999999999888 99999999872 28
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
+|+|+|+|+.+|.+.++... .++.+.++++++|+++||.|+|+.+|+|||+||+|
T Consensus 101 vYiV~elMetDL~~iik~~~-------------------------~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsN 155 (359)
T KOG0660|consen 101 VYLVFELMETDLHQIIKSQQ-------------------------DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSN 155 (359)
T ss_pred eEEehhHHhhHHHHHHHcCc-------------------------cccHHHHHHHHHHHHHhcchhhcccccccccchhh
Confidence 99999999999999999875 36777888888888888999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 156 ll~n---------------------------------------------------------------------------- 159 (359)
T KOG0660|consen 156 LLLN---------------------------------------------------------------------------- 159 (359)
T ss_pred eeec----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCccee-----ccccccccccceeeCceeeec-CCCCCccceeeeeeeeEe
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD-----DEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~ 306 (351)
..+.+||+|||+++.. ....+..+.|.+|+|||++.. ..|+.+.||||+||++.|
T Consensus 160 -------------------~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AE 220 (359)
T KOG0660|consen 160 -------------------ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAE 220 (359)
T ss_pred -------------------cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHH
Confidence 4678999999999875 334467888999999998864 678999999999999999
Q ss_pred eccccccccccCCCcee
Q psy2006 307 LYLGITLMARKTKTKYF 323 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~ 323 (351)
|++|+++|.|.+.-+.+
T Consensus 221 mL~gkplFpG~d~v~Ql 237 (359)
T KOG0660|consen 221 MLTGKPLFPGKDYVHQL 237 (359)
T ss_pred HHcCCCCCCCCchHHHH
Confidence 99999999998866554
No 24
>KOG0663|consensus
Probab=100.00 E-value=8.6e-38 Score=276.37 Aligned_cols=210 Identities=21% Similarity=0.302 Sum_probs=178.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh---hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--eEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~~~l 75 (351)
+..|++|+||.||+|+|+.+++.||+|.++.+.. ..=...+||.+|.+.+|+| ||.+.++..... .+||
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~N------IV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPN------IVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCC------eeeeEEEEeccccceeee
Confidence 4579999999999999999999999999986432 1224689999999999888 999999998765 8999
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||||..||..+|..-+ .++....+|-++.|++.| +.|||...|+|||+|++|+.+
T Consensus 155 VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~g-----------------------lk~lH~~wilHRDLK~SNLLm 210 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRG-----------------------LKHLHDNWILHRDLKTSNLLL 210 (419)
T ss_pred eHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHH-----------------------HHHHhhceeEecccchhheee
Confidence 99999999999998876 467777777777777777 999999999999999999998
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 211 ~~------------------------------------------------------------------------------ 212 (419)
T KOG0663|consen 211 SH------------------------------------------------------------------------------ 212 (419)
T ss_pred cc------------------------------------------------------------------------------
Confidence 83
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~ 311 (351)
.+.+||+|||+++....+ .+..+-|.+|+|||++++. .|+.+.|+||+||++.|++++.
T Consensus 213 -----------------~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 213 -----------------KGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred -----------------CCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence 467999999999876554 5667779999999999986 4799999999999999999999
Q ss_pred ccccccCCCceee--------ecccCCccccc
Q psy2006 312 TLMARKTKTKYFY--------HGKLDWDEKGT 335 (351)
Q Consensus 312 ~pf~~~~~~~~~~--------~~~~~~~~~~~ 335 (351)
++|.|.+..+.+. ..+-.|++.+.
T Consensus 276 Plf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 276 PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred CCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 9999999877653 12335666655
No 25
>KOG0694|consensus
Probab=100.00 E-value=3.3e-38 Score=301.86 Aligned_cols=197 Identities=17% Similarity=0.314 Sum_probs=170.2
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++.||+|+||+|++|..+.+++.||||++++. .+..+....|.+|+.... |+. +++|+..|.+..|+|+
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPF------L~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPF------LVNLFSCFQTKEHLFF 446 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCe------EeecccccccCCeEEE
Confidence 35799999999999999999999999999875 356678889999999886 444 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ ||++...++.. .+++..++-++..++.| |+|||++||++||+|-+||.
T Consensus 447 vmey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~-----------------------L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLG-----------------------LQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred EEEecCCCcEEEEEecc---cccHHHHHHHHHHHHHH-----------------------HHHHHhcCceeeecchhheE
Confidence 99999 89965554433 35555555555555555 99999999999999999999
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
|.
T Consensus 501 LD------------------------------------------------------------------------------ 502 (694)
T KOG0694|consen 501 LD------------------------------------------------------------------------------ 502 (694)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 87
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.+||+|||+|+- .....++.+|||.|+|||++.+..|+.++|+|+|||++|+|++|+
T Consensus 503 -----------------~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq 565 (694)
T KOG0694|consen 503 -----------------TEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGE 565 (694)
T ss_pred -----------------ccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCC
Confidence 468899999999975 345667899999999999999999999999999999999999999
Q ss_pred ccccccCCCceee
Q psy2006 312 TLMARKTKTKYFY 324 (351)
Q Consensus 312 ~pf~~~~~~~~~~ 324 (351)
+||.+++.+++|.
T Consensus 566 ~PF~gddEee~Fd 578 (694)
T KOG0694|consen 566 SPFPGDDEEEVFD 578 (694)
T ss_pred CCCCCCCHHHHHH
Confidence 9999999999885
No 26
>KOG0032|consensus
Probab=100.00 E-value=2.7e-37 Score=290.86 Aligned_cols=221 Identities=27% Similarity=0.353 Sum_probs=191.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|+.+.+|+.+|+|++.+.. ...+.+.+|+++|+++. |+| ||++++.|+....+++|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpn------iv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPN------IVQLKDAFEDPDSVYLV 114 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCC------EEEEEEEEEcCCeEEEE
Confidence 57999999999999999999999999997643 23468899999999998 666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||+| ||.|++.+... .+++..+..++.|++.+ +.|||+.|++|||+||+|+.+
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~a-----------------------v~~lH~~gvvHrDlKpEN~L~ 168 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEA-----------------------VKYLHSLGVVHRDLKPENLLL 168 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHH-----------------------HHHHHhCCceeccCCHHHeee
Confidence 9999 99999999887 27888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+..
T Consensus 169 ~~~~---------------------------------------------------------------------------- 172 (382)
T KOG0032|consen 169 ASKD---------------------------------------------------------------------------- 172 (382)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 7311
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
.....+|++|||++..... .....+|||.|+|||++.+.+++..+|+||+|+++|.|++|.+|
T Consensus 173 ---------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~P 237 (382)
T KOG0032|consen 173 ---------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPP 237 (382)
T ss_pred ---------------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCC
Confidence 0124799999999987554 56779999999999999999999999999999999999999999
Q ss_pred ccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 314 MARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 314 f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
|.+.+..+.+. .+++.++...|. .+++.||++
T Consensus 238 F~~~~~~~~~~~i~~~~~~f~~~~w~--~is~~akd~ 272 (382)
T KOG0032|consen 238 FWGETEFEIFLAILRGDFDFTSEPWD--DISESAKDF 272 (382)
T ss_pred CcCCChhHHHHHHHcCCCCCCCCCcc--ccCHHHHHH
Confidence 99999888875 466666666665 888888876
No 27
>KOG0198|consensus
Probab=100.00 E-value=1.7e-36 Score=275.54 Aligned_cols=192 Identities=22% Similarity=0.262 Sum_probs=164.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhh-hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--eEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY-REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~~~lV~E 78 (351)
+.||+|+||+||++.+..+|+.+|+|.+...... .+...+|+++|++|+|++ ||++++...... .++|.||
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~------IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPN------IVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCC------EEeeCCccccccCeeeEeeee
Confidence 5699999999999999989999999999764211 356789999999999766 999999855555 6999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +|||.+++.+.+. .+|+..++.+.+|+++| |.|||++|++|+|+|+.|+.+..
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~G-----------------------L~ylHs~g~vH~DiK~~NiLl~~ 152 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEG-----------------------LAYLHSKGIVHCDIKPANILLDP 152 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeccCcccceEEEeC
Confidence 99 9999999999876 79999999999999998 99999999999999999998870
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 153 -------------------------------------------------------------------------------- 152 (313)
T KOG0198|consen 153 -------------------------------------------------------------------------------- 152 (313)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceec------cccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDD------EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG 310 (351)
....+||+|||++.... .......||+.|||||++... ....++||||+||++.||+||
T Consensus 153 --------------~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg 218 (313)
T KOG0198|consen 153 --------------SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTG 218 (313)
T ss_pred --------------CCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCC
Confidence 13579999999887533 223468899999999999853 334699999999999999999
Q ss_pred ccccccc
Q psy2006 311 ITLMARK 317 (351)
Q Consensus 311 ~~pf~~~ 317 (351)
.+||...
T Consensus 219 ~~PW~~~ 225 (313)
T KOG0198|consen 219 KPPWSEF 225 (313)
T ss_pred CCcchhh
Confidence 9999873
No 28
>KOG0658|consensus
Probab=100.00 E-value=4.4e-37 Score=275.56 Aligned_cols=196 Identities=20% Similarity=0.367 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~~lV 76 (351)
+.+|+|+||.||+|+..++++.||||.+-.+.. -..+|+++|+.+.|+| ||+|.-+|.... ++.+|
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpN------IV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPN------IVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcC------eeeEEEEEEecCCCchhHHHHH
Confidence 579999999999999999999999999976433 3346999999999888 999999997543 78899
Q ss_pred EeccCCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 77 FEILGLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|||++.+|.+.++.. ....+|.-.+|-++.|| ++||.|||+.||+|||+||.|+.
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Ql-----------------------frgl~yLh~~~IcHRDIKPqNlL 157 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQL-----------------------FRGLAYLHSHGICHRDIKPQNLL 157 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHH-----------------------HHHHHHHHhcCcccCCCChheEE
Confidence 999999999999864 12345554455555555 55599999999999999999987
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 158 vD------------------------------------------------------------------------------ 159 (364)
T KOG0658|consen 158 VD------------------------------------------------------------------------------ 159 (364)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcce--eccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
+..+.+||+|||.++. .+.+..+..+|..|+|||++++ ..|+.+.|+||.||++.||+-|+
T Consensus 160 ----------------~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~ 223 (364)
T KOG0658|consen 160 ----------------PDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ 223 (364)
T ss_pred ----------------CCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC
Confidence 1357899999999987 4555667888999999999998 47899999999999999999999
Q ss_pred ccccccCCCcee
Q psy2006 312 TLMARKTKTKYF 323 (351)
Q Consensus 312 ~pf~~~~~~~~~ 323 (351)
+.|.|++..+.+
T Consensus 224 plFpG~s~~dQL 235 (364)
T KOG0658|consen 224 PLFPGDSSVDQL 235 (364)
T ss_pred cccCCCCHHHHH
Confidence 999999877765
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.7e-36 Score=285.84 Aligned_cols=227 Identities=22% Similarity=0.324 Sum_probs=163.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+||+||+|.+..+++.||+|++.+.. .....+..|+.+++.+.|++ |+++++.|....++|||
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~------iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW------VVKMFYSFQDKLNLYLI 79 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC------cceEEEEEecCCeEEEE
Confidence 468999999999999999999999999997532 22346778999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ |++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+
T Consensus 80 ~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~a-----------------------L~~lH~~givHrDlKp~NILi 134 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLA-----------------------IDSIHQLGFIHRDIKPDNLLL 134 (363)
T ss_pred EcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEecCCCHHHeEE
Confidence 9999 899999998764 57888888888888888 9999999999999998775
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||+|+......... .+.. . .+. .+..
T Consensus 135 ~~~~~vkL~DFGla~~~~~~~~~~----~~~~---~---------------------------------~~~----~~~~ 170 (363)
T cd05628 135 DSKGHVKLSDFGLCTGLKKAHRTE----FYRN---L---------------------------------NHS----LPSD 170 (363)
T ss_pred CCCCCEEEeeccCccccccccccc----cccc---c---------------------------------ccc----cccc
Confidence 677787775432211100 0000 0 000 0000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
....+ ...-...+... ..........+||+.|+|||++.+..++.++|+|||||++|+|
T Consensus 171 ------------~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 171 ------------FTFQN--------MNSKRKAETWK-RNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred ------------ccccc--------cccccccchhh-hccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence 00000 00000000000 0001112346799999999999999999999999999999999
Q ss_pred ccccccccccCCCcee
Q psy2006 308 YLGITLMARKTKTKYF 323 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~ 323 (351)
++|..||.+.+..+.+
T Consensus 230 l~G~~Pf~~~~~~~~~ 245 (363)
T cd05628 230 LIGYPPFCSETPQETY 245 (363)
T ss_pred HhCCCCCCCCCHHHHH
Confidence 9999999988766654
No 30
>KOG0033|consensus
Probab=100.00 E-value=3e-38 Score=268.65 Aligned_cols=221 Identities=20% Similarity=0.296 Sum_probs=185.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+|+.|+++.++.+|+.||+|+++.. ....+...+|++|-+.|+|+| |++|.+.+...+..+||+|
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~------IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN------IVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCc------EeehhhhhcccceeEEEEe
Confidence 4699999999999999999999999999643 345678899999999999988 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
++ |++|..-+-... - +++..+..+++|++.+|+|||.++|+|||+||.|+.|..
T Consensus 91 ~m~G~dl~~eIV~R~--~-----------------------ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 91 LVTGGELFEDIVARE--F-----------------------YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS 145 (355)
T ss_pred cccchHHHHHHHHHH--H-----------------------HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee
Confidence 99 888876554432 2 445555555666666699999999999999999998871
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
.
T Consensus 146 -----------K-------------------------------------------------------------------- 146 (355)
T KOG0033|consen 146 -----------K-------------------------------------------------------------------- 146 (355)
T ss_pred -----------c--------------------------------------------------------------------
Confidence 0
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
.....+||+|||++...+. .....+|||.|||||++...+++.++|||++|+++|-++.|.+||.
T Consensus 147 -------------~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 147 -------------AKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred -------------cCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 0234699999999976442 2234789999999999999999999999999999999999999999
Q ss_pred ccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 316 RKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 316 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+.+...+|. .|+.+.+...|. -|+++||+|
T Consensus 214 ~~~~~rlye~I~~g~yd~~~~~w~--~is~~Ak~L 246 (355)
T KOG0033|consen 214 DEDQHRLYEQIKAGAYDYPSPEWD--TVTPEAKSL 246 (355)
T ss_pred CccHHHHHHHHhccccCCCCcccC--cCCHHHHHH
Confidence 999998886 588888876665 889999886
No 31
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.3e-36 Score=285.79 Aligned_cols=231 Identities=21% Similarity=0.303 Sum_probs=164.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||+|+||+||+|++..+++.||+|++.+.. .....+.+|+.+++.+.|++ |+++++.|...+++|+|
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~------iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW------VVRLYYSFQDKDNLYFV 79 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCc------CCeEEEEEEeCCEEEEE
Confidence 468999999999999999999999999997532 23456788999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||| +++|.+++.+.+ .+++..++.++.|++.| |+|||+++++|||+|++||
T Consensus 80 ~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~a-----------------------l~~lH~~~ivHrDlKp~NILl 134 (382)
T cd05625 80 MDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCA-----------------------VESVHKMGFIHRDIKPDNILI 134 (382)
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEEE
Confidence 9999 899999998764 57888888888888888 9999999999999998775
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||+|........... +. +......
T Consensus 135 ~~~g~~kL~DFGla~~~~~~~~~~~----~~-~~~~~~~----------------------------------------- 168 (382)
T cd05625 135 DRDGHIKLTDFGLCTGFRWTHDSKY----YQ-SGDHVRQ----------------------------------------- 168 (382)
T ss_pred CCCCCEEEeECCCCccccccccccc----cc-ccccccc-----------------------------------------
Confidence 7789998754221111000 00 0000000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeecc------CCcc-eeccccccccccceeeCceeeecCCCCCccceeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDF------GSAT-FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~df------g~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
... ...+... ....+...+. .... .........+||+.|+|||++.+.+++.++|+||+
T Consensus 169 ---~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 169 ---DSM-------DFSNEWG----DPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ---ccc-------ccccccc----ccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 000 0000000 0000000000 0000 01112234679999999999999999999999999
Q ss_pred eeeeEeeccccccccccCCCce
Q psy2006 301 GCIIFELYLGITLMARKTKTKY 322 (351)
Q Consensus 301 G~~l~~l~tG~~pf~~~~~~~~ 322 (351)
||++|+|++|.+||.+.+..+.
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~ 256 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLET 256 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999988765543
No 32
>KOG0585|consensus
Probab=100.00 E-value=1.7e-36 Score=278.75 Aligned_cols=216 Identities=20% Similarity=0.260 Sum_probs=170.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---------------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeee
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---------------KYREAARLEINALQKIGEKDPNGRHLCVKMLD 65 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~ 65 (351)
++.||.|+||.|-+|++..+++.||||++.+.+ ...+.+.+||.||+++.|+| ||+|++
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n------VV~LiE 175 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN------VVKLIE 175 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC------eeEEEE
Confidence 367999999999999999999999999997542 12257889999999999888 999999
Q ss_pred eEeeCC--eEEEEEecc-CCCHHHHHHhcCCCC-CchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 66 WFDYHG--HMCIAFEIL-GLSVFDFLKENNYLP-YSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 66 ~f~~~~--~~~lV~E~~-g~sL~~~l~~~~~~~-~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
+..+.. ++|||+||| .|.+... ....+ +.+.+++.+++.+..| |+|||.+
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~G-----------------------LEYLH~Q 229 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLG-----------------------LEYLHYQ 229 (576)
T ss_pred eecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHH-----------------------HHHHHhc
Confidence 998775 999999999 7765532 11112 4555555555555555 9999999
Q ss_pred cccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
||+||||||.|+.|.+
T Consensus 230 giiHRDIKPsNLLl~~---------------------------------------------------------------- 245 (576)
T KOG0585|consen 230 GIIHRDIKPSNLLLSS---------------------------------------------------------------- 245 (576)
T ss_pred CeeccccchhheEEcC----------------------------------------------------------------
Confidence 9999999999999882
Q ss_pred CCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceec--------cccccccccceeeCceeeecC---C
Q psy2006 222 DKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD--------EHHSTIVSTRHYRAPEVILEL---G 290 (351)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--------~~~~~~~gt~~y~aPE~~~~~---~ 290 (351)
.+.|||+|||.+.... ......+|||.|+|||++.+. .
T Consensus 246 -------------------------------~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~ 294 (576)
T KOG0585|consen 246 -------------------------------DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFS 294 (576)
T ss_pred -------------------------------CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCcc
Confidence 4679999999886431 122447899999999999873 2
Q ss_pred C-CCccceeeeeeeeEeeccccccccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 291 W-AQPCDVWSIGCIIFELYLGITLMARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 291 ~-~~~~DiwslG~~l~~l~tG~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+ +.+.||||+|++||.++.|+.||.+....++|. +..+.|+..++ +++++|||
T Consensus 295 ~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe----~~e~~kDl 351 (576)
T KOG0585|consen 295 YSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPE----INEDLKDL 351 (576)
T ss_pred ccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCccc----ccHHHHHH
Confidence 3 778899999999999999999999999888875 56667776653 34454443
No 33
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-35 Score=283.50 Aligned_cols=235 Identities=22% Similarity=0.325 Sum_probs=164.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||+|+||+||+|++..+++.||+|++.+.. ...+.+.+|+.+++.++|++ |++++++|...+++|+|
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~------iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW------VVKLYYSFQDKDNLYFV 79 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCC------eeeeEEEEecCCEEEEE
Confidence 468999999999999999999999999997532 23356788999999999887 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ +++|.+++.+.. .+++..++.++.|++.| |+|||+.|++|||+|+.|+
T Consensus 80 ~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~a-----------------------L~~LH~~givHrDlKp~Nili 134 (381)
T cd05626 80 MDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLA-----------------------IESVHKMGFIHRDIKPDNILI 134 (381)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeecCCcHHHEEE
Confidence 9999 899999998764 57888888888888888 9999999999999998875
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||+++......... .+.....+. .. .
T Consensus 135 ~~~~~~kL~DFGl~~~~~~~~~~~----~~~~~~~~~-~~-------------------------------------~-- 170 (381)
T cd05626 135 DLDGHIKLTDFGLCTGFRWTHNSK----YYQKGSHIR-QD-------------------------------------S-- 170 (381)
T ss_pred CCCCCEEEeeCcCCcccccccccc----ccccccccc-cc-------------------------------------c--
Confidence 678888875432211100 000000000 00 0
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCII 304 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 304 (351)
. ..... ++. ...+.......+...... ......+.+||+.|+|||++.+..++.++|+||+||++
T Consensus 171 --~-~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 171 --M-EPSDL---WDD------VSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred --c-Ccccc---ccc------ccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0 00000 000 000000000000000000 11112356899999999999988999999999999999
Q ss_pred EeeccccccccccCCCce
Q psy2006 305 FELYLGITLMARKTKTKY 322 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~~ 322 (351)
|+|++|..||...+..+.
T Consensus 239 ~elltG~~Pf~~~~~~~~ 256 (381)
T cd05626 239 FEMLVGQPPFLAPTPTET 256 (381)
T ss_pred HHHHhCCCCCcCCCHHHH
Confidence 999999999988765543
No 34
>KOG4236|consensus
Probab=100.00 E-value=1.8e-35 Score=274.77 Aligned_cols=223 Identities=19% Similarity=0.237 Sum_probs=190.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|.||+||-|+++.+|+.||||++++. .........|++||+.+.|+. ||.+.-.|+..+.++.|||
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPG------iV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPG------IVNLECMFETPERVFVVME 643 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCC------eeEEEEeecCCceEEEEeh
Confidence 4699999999999999999999999999864 233467788999999999988 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
-+.|++.+.|-...-.++|+...+-++.||+.| |.|||-++|+|.|+||.|+.|.+-
T Consensus 644 Kl~GDMLEMILSsEkgRL~er~TkFlvtQIL~A-----------------------Lr~LH~knIvHCDLKPENVLLas~ 700 (888)
T KOG4236|consen 644 KLHGDMLEMILSSEKGRLPERITKFLVTQILVA-----------------------LRYLHFKNIVHCDLKPENVLLASA 700 (888)
T ss_pred hhcchHHHHHHHhhcccchHHHHHHHHHHHHHH-----------------------HHHhhhcceeeccCCchheeeccC
Confidence 999999999887755678888888888888877 999999999999999999999830
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 701 -------------------------------------------------------------------------------- 700 (888)
T KOG4236|consen 701 -------------------------------------------------------------------------------- 700 (888)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..-..+||+|||++++.+. -..+.+|||.|+|||++...+|+...|+||+|+++|..+.|.+||+.
T Consensus 701 ------------~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 701 ------------SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred ------------CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 0235799999999998654 34678999999999999999999999999999999999999999976
Q ss_pred cC-CCceeeecccCCcccccccccccccCccC
Q psy2006 317 KT-KTKYFYHGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 317 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+. -.+.+.+..+-++..+|. .|+.+|-||
T Consensus 769 dEdIndQIQNAaFMyPp~PW~--eis~~Aidl 798 (888)
T KOG4236|consen 769 DEDINDQIQNAAFMYPPNPWS--EISPEAIDL 798 (888)
T ss_pred ccchhHHhhccccccCCCchh--hcCHHHHHH
Confidence 54 444555666666666665 677777655
No 35
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.8e-35 Score=279.28 Aligned_cols=231 Identities=21% Similarity=0.308 Sum_probs=164.2
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||+|+||+||+|++..+++.||+|++.+.. .....+.+|+.+|+.+.|++ |+++++.|..++++|+|
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~------iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEW------VVKLYYSFQDKDNLYFV 79 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCC------cceEEEEEEcCCEEEEE
Confidence 468999999999999999999999999997532 23456778999999999877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ +++|.+++...+ .+++..++.++.|++.| |+|||++|++|||+|++|+
T Consensus 80 ~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivHrDlkp~Nill 134 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCA-----------------------IESVHKMGFIHRDIKPDNILI 134 (376)
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeCCCCHHHEEE
Confidence 9999 999999998764 57888888888888888 9999999999999998774
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||+|.......... +..+....... .....
T Consensus 135 ~~~~~ikL~DFG~a~~~~~~~~~~-----~~~~~~~~~~~-----------------------------------~~~~~ 174 (376)
T cd05598 135 DRDGHIKLTDFGLCTGFRWTHDSK-----YYQKGDHHRQD-----------------------------------SMEPS 174 (376)
T ss_pred CCCCCEEEEeCCCCcccccccccc-----ccccccccccc-----------------------------------ccccc
Confidence 778899875432111100 00000000000 00000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCc---ceeccccccccccceeeCceeeecCCCCCccceeeeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCII 304 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 304 (351)
.. . . ............. ..........+||+.|+|||++.+..++.++|+||+||++
T Consensus 175 ~~---~---------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 175 EE---W---------------S--EIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred cc---c---------------c--ccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00 0 0 0000000000000 0011122346899999999999999999999999999999
Q ss_pred EeeccccccccccCCCce
Q psy2006 305 FELYLGITLMARKTKTKY 322 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~~ 322 (351)
|+|++|..||.+.+..+.
T Consensus 235 yell~G~~Pf~~~~~~~~ 252 (376)
T cd05598 235 YEMLVGQPPFLADTPAET 252 (376)
T ss_pred eehhhCCCCCCCCCHHHH
Confidence 999999999988775543
No 36
>KOG0192|consensus
Probab=100.00 E-value=2.7e-35 Score=275.06 Aligned_cols=194 Identities=20% Similarity=0.270 Sum_probs=169.5
Q ss_pred ccccCcccceEEEEEEeecCcE-EEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-eEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSV-VALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-HMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~-vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-~~~lV 76 (351)
+.||.|+||+||+|. +.|.. ||+|++.... ...+.+.+|+.+|.+++|+| ||++++++..+. .+|||
T Consensus 47 ~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpN------IV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPN------IVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCC------eeeEEEEEcCCCCceEEE
Confidence 459999999999999 56776 9999998642 22558899999999999988 999999999988 89999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc-ccccccCCCCeE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK-REVRRVRRCDIR 154 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~d~k~~ni~ 154 (351)
|||+ +|+|.+++.......++...+..++.+|+.| ++|||+++ |+|||+|+.|+.
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArG-----------------------m~YLH~~~~iIHrDLK~~NiL 175 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARG-----------------------MEYLHSEGPIIHRDLKSDNIL 175 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHH-----------------------HHHHhcCCCeeecccChhhEE
Confidence 9999 9999999998544578899999999999888 99999999 999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 176 v~------------------------------------------------------------------------------ 177 (362)
T KOG0192|consen 176 VD------------------------------------------------------------------------------ 177 (362)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 87
Q ss_pred hhhhhhccchhhhhhhcccc-ceeeeccCCcceec---cccccccccceeeCceeee--cCCCCCccceeeeeeeeEeec
Q psy2006 235 QADRILSSVSSLVMRRVRRC-DIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVIL--ELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~~l~~l~ 308 (351)
... .+||+|||+++... ...+...||+.|||||++. ...++.++|+||||+++||++
T Consensus 178 -----------------~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~ 240 (362)
T KOG0192|consen 178 -----------------LKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELL 240 (362)
T ss_pred -----------------CCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHH
Confidence 122 79999999998744 3445579999999999999 568999999999999999999
Q ss_pred cccccccccCCCc
Q psy2006 309 LGITLMARKTKTK 321 (351)
Q Consensus 309 tG~~pf~~~~~~~ 321 (351)
||..||.+.+...
T Consensus 241 t~~~Pf~~~~~~~ 253 (362)
T KOG0192|consen 241 TGEIPFEDLAPVQ 253 (362)
T ss_pred HCCCCCCCCCHHH
Confidence 9999999988633
No 37
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.9e-36 Score=281.97 Aligned_cols=230 Identities=23% Similarity=0.320 Sum_probs=163.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||.|+||+||+|++..+++.||||++.... .....+.+|+.+|+.+.|++ |++++++|..++++|+|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~------iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPW------VVKLYYSFQDENYLYLI 79 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC------CcceEEEEEcCCeEEEE
Confidence 368999999999999999999999999997532 23345678999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|++|+
T Consensus 80 ~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~a-----------------------L~~lH~~~ivH~Dlkp~NIl~ 134 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILA-----------------------IDSIHKLGYIHRDIKPDNLLL 134 (364)
T ss_pred ECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeccCCHHHeEE
Confidence 9999 899999998764 57888888888888888 9999999999999998775
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||++........... +. ... +. ..
T Consensus 135 ~~~~~~kl~Dfg~~~~~~~~~~~~~----~~---~~~---------------------------------~~----~~-- 168 (364)
T cd05599 135 DAKGHIKLSDFGLCTGLKKSHRTEF----YR---ILS---------------------------------HA----LP-- 168 (364)
T ss_pred CCCCCEEEeecccceeccccccccc----cc---ccc---------------------------------cc----cc--
Confidence 6778887754221111000 00 000 00 00
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
........ .+ .........+.. .........+||+.|+|||++.+..++.++|+|||||++|+|
T Consensus 169 -----~~~~~~~~-----~~----~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 169 -----SNFLDFIS-----KP----MSSKRKAETWKR--NRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred -----cccccccc-----cc----ccccccccchhh--cccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 00000000 00 000000000000 000112345799999999999988999999999999999999
Q ss_pred ccccccccccCCCcee
Q psy2006 308 YLGITLMARKTKTKYF 323 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~ 323 (351)
++|..||.+.+..+.+
T Consensus 233 ~~G~~Pf~~~~~~~~~ 248 (364)
T cd05599 233 LVGYPPFCSDNPQETY 248 (364)
T ss_pred hcCCCCCCCCCHHHHH
Confidence 9999999887765443
No 38
>KOG0578|consensus
Probab=100.00 E-value=5.2e-36 Score=281.50 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=174.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||+|+.|.||.|....+++.||||.+.... ...+-+..|+.+|+...|+| ||..++.|...+.+|.||||+
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~N------iVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPN------IVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchH------HHHHHHHhcccceeEEEEeec
Confidence 68999999999999999999999999997643 44566789999999999888 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
||+|.|.+.... +.|.++..+++.++.| |+|||.+||+|||+|.+||.|.
T Consensus 353 ~ggsLTDvVt~~~---~~E~qIA~Icre~l~a-----------------------L~fLH~~gIiHrDIKSDnILL~--- 403 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR---MTEGQIAAICREILQG-----------------------LKFLHARGIIHRDIKSDNILLT--- 403 (550)
T ss_pred CCCchhhhhhccc---ccHHHHHHHHHHHHHH-----------------------HHHHHhcceeeeccccceeEec---
Confidence 999999987764 5555555555555555 9999999999999999999988
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 404 -------------------------------------------------------------------------------- 403 (550)
T KOG0578|consen 404 -------------------------------------------------------------------------------- 403 (550)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+.+||+|||+|..... ...+.+|||.|||||++....|++++||||||++++||+-|++||-.
T Consensus 404 ------------~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln 471 (550)
T KOG0578|consen 404 ------------MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN 471 (550)
T ss_pred ------------cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence 246799999999976433 44678999999999999999999999999999999999999999987
Q ss_pred cCCCceee----ecccCCccc
Q psy2006 317 KTKTKYFY----HGKLDWDEK 333 (351)
Q Consensus 317 ~~~~~~~~----~~~~~~~~~ 333 (351)
.+.-..++ +|.......
T Consensus 472 E~PlrAlyLIa~ng~P~lk~~ 492 (550)
T KOG0578|consen 472 ENPLRALYLIATNGTPKLKNP 492 (550)
T ss_pred CChHHHHHHHhhcCCCCcCCc
Confidence 76655543 465544433
No 39
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.2e-35 Score=279.11 Aligned_cols=239 Identities=20% Similarity=0.270 Sum_probs=164.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||.|+||+||+|.+..+++.||||++.+.. ...+.+.+|+++++.+.|++ |++++++|..+.++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~------iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW------VVSLYYSFQDAQYLYLI 79 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCC------cceEEEEEEcCCeeEEE
Confidence 468999999999999999999999999997532 22346778999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|+.|+
T Consensus 80 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~a-----------------------L~~LH~~givHrDlkp~NIll 134 (377)
T cd05629 80 MEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLA-----------------------IEAVHKLGFIHRDIKPDNILI 134 (377)
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHHEEE
Confidence 9999 899999998754 57888888888888888 9999999999999998775
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||+|+........ ..|. .....
T Consensus 135 ~~~~~~kl~DfGla~~~~~~~~~----~~~~--------------------------------------------~~~~~ 166 (377)
T cd05629 135 DRGGHIKLSDFGLSTGFHKQHDS----AYYQ--------------------------------------------KLLQG 166 (377)
T ss_pred CCCCCEEEeeccccccccccccc----cccc--------------------------------------------ccccc
Confidence 67899988542111100 0000 00000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
.................. ........++.+++... .......+||+.|+|||++.+..++.++|+||+||++|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (377)
T cd05629 167 KSNKNRIDNRNSVAVDSI---NLTMSSKDQIATWKKNR--RLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFEC 241 (377)
T ss_pred cccccccccccccccccc---cccccchhhhhhhhhcc--cccccccCCCccccCHHHHccCCCCCceeeEecchhhhhh
Confidence 000000000000000000 00000000111111110 0011245799999999999988999999999999999999
Q ss_pred ccccccccccCCCcee
Q psy2006 308 YLGITLMARKTKTKYF 323 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~ 323 (351)
++|.+||.+.+..+.+
T Consensus 242 ltG~~Pf~~~~~~~~~ 257 (377)
T cd05629 242 LIGWPPFCSENSHETY 257 (377)
T ss_pred hcCCCCCCCCCHHHHH
Confidence 9999999887665543
No 40
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.3e-35 Score=277.31 Aligned_cols=226 Identities=20% Similarity=0.306 Sum_probs=164.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+||+||+|.+..+++.||+|++.... .....+..|+.++..+.|++ |+++++.|...+++|+|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW------VVKMFYSFQDKRNLYLI 79 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC------EeeEEEEEEcCCEEEEE
Confidence 367999999999999999999999999997532 23356678999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ |++|.+++.... .+++..++.++.|++.+ |+|||++|++|||+|++|+
T Consensus 80 ~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------L~~lH~~givHrDLkp~NIli 134 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLA-----------------------IDAIHQLGFIHRDIKPDNLLL 134 (360)
T ss_pred EeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEccCCCHHHEEE
Confidence 9999 899999998764 57888888888888887 9999999999999998775
Q ss_pred ------EEeecCCcccCCCCccc-ccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 154 ------RLIDFGSATFDDEHHST-IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
+|+|||+++........ .........|...
T Consensus 135 ~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 171 (360)
T cd05627 135 DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDF------------------------------------------- 171 (360)
T ss_pred CCCCCEEEeeccCCcccccccccccccccccCCcccc-------------------------------------------
Confidence 67888887543222110 0000000000000
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
...+ .....+...+ ...........+||+.|+|||++.+..++.++|+||+||++|+
T Consensus 172 --------------~~~~-------~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilye 228 (360)
T cd05627 172 --------------SFQN-------MNSKRKAETW--KKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (360)
T ss_pred --------------cccc-------cccccccccc--cccccccccccCCCccccCHHHHcCCCCCCcceeccccceeee
Confidence 0000 0000000000 0001111234679999999999999999999999999999999
Q ss_pred eccccccccccCCCcee
Q psy2006 307 LYLGITLMARKTKTKYF 323 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~ 323 (351)
|++|.+||.+.+..+.+
T Consensus 229 l~tG~~Pf~~~~~~~~~ 245 (360)
T cd05627 229 MLIGYPPFCSETPQETY 245 (360)
T ss_pred cccCCCCCCCCCHHHHH
Confidence 99999999988766554
No 41
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-35 Score=274.64 Aligned_cols=197 Identities=22% Similarity=0.275 Sum_probs=171.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||.|+||.||+|++..+++.||+|++.... .....+..|+.+++.+.|++ |++++++|...++.|||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW------LVKLLYAFQDDEYLYLA 79 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCC------CccEEEEEEcCCEEEEE
Confidence 367999999999999998899999999997542 23456778999999998777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.+ |.|||+.|++|||+|+.|+.+
T Consensus 80 ~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~Nil~ 134 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEA-----------------------VDALHELGYIHRDLKPENFLI 134 (333)
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCCHHHEEE
Confidence 9999 899999998764 57888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 135 ~------------------------------------------------------------------------------- 135 (333)
T cd05600 135 D------------------------------------------------------------------------------- 135 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+||+|||++...........||+.|+|||.+.+..++.++|+||+||++|+|++|..||.
T Consensus 136 ----------------~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 199 (333)
T cd05600 136 ----------------ASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFS 199 (333)
T ss_pred ----------------CCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCC
Confidence 2356999999998765555566789999999999998899999999999999999999999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
..+..+.+
T Consensus 200 ~~~~~~~~ 207 (333)
T cd05600 200 GSTPNETW 207 (333)
T ss_pred CCCHHHHH
Confidence 87765543
No 42
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.1e-35 Score=272.28 Aligned_cols=195 Identities=21% Similarity=0.277 Sum_probs=167.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||+|.+..+++.||+|++.... .......+|+.+++.+.|++ |+++++.|..++++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~------i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPF------LTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC------CCCEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999997532 23345678999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|+.||.+.
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~ivHrDlkp~NIll~ 129 (323)
T cd05571 75 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSA-----------------------LGYLHSCDVVYRDLKLENLMLD 129 (323)
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEeCCCCHHHEEEC
Confidence 999 899999988754 57888888888888887 9999999999999999999875
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (323)
T cd05571 130 -------------------------------------------------------------------------------- 129 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.+||+|||++... .......+||+.|+|||.+.+..++.++|+||+||++|+|++|..|
T Consensus 130 ---------------~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P 194 (323)
T cd05571 130 ---------------KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred ---------------CCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCC
Confidence 2356899999988642 2223446799999999999999999999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|.+.+....
T Consensus 195 f~~~~~~~~ 203 (323)
T cd05571 195 FYNQDHEKL 203 (323)
T ss_pred CCCCCHHHH
Confidence 987665443
No 43
>KOG0201|consensus
Probab=100.00 E-value=2.1e-36 Score=276.21 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=172.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++.||+|+||.||+|.+..+++.||+|++..+. ...+.+.+|+.+|.++.+++ |..++..|..+..+|++||
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~------it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPN------ITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcch------HHhhhhheeecccHHHHHH
Confidence 468999999999999999999999999998653 45567889999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|| ||++.+.++... .+.|..+-.++++++.| |.|+|.++.+|||+|..|+.+.
T Consensus 92 y~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~-----------------------l~ylH~~~kiHrDIKaanil~s- 145 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN--ILDEFEIAVILREVLKG-----------------------LDYLHSEKKIHRDIKAANILLS- 145 (467)
T ss_pred HhcCcchhhhhccCC--CCccceeeeehHHHHHH-----------------------hhhhhhcceecccccccceeEe-
Confidence 99 999999998876 22454455555555555 9999999999999999999887
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 146 -------------------------------------------------------------------------------- 145 (467)
T KOG0201|consen 146 -------------------------------------------------------------------------------- 145 (467)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
..+.+|++|||.+.+.+. ...+.+|||.|||||++.+..|+.++||||||++.+||++|.+|+
T Consensus 146 --------------~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~ 211 (467)
T KOG0201|consen 146 --------------ESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPH 211 (467)
T ss_pred --------------ccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCC
Confidence 236899999999866332 336799999999999999999999999999999999999999999
Q ss_pred cccCCCceee
Q psy2006 315 ARKTKTKYFY 324 (351)
Q Consensus 315 ~~~~~~~~~~ 324 (351)
.....+.+++
T Consensus 212 s~~hPmrvlf 221 (467)
T KOG0201|consen 212 SKLHPMRVLF 221 (467)
T ss_pred cccCcceEEE
Confidence 9999998875
No 44
>KOG0580|consensus
Probab=100.00 E-value=1.4e-36 Score=257.62 Aligned_cols=218 Identities=17% Similarity=0.276 Sum_probs=189.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||.|-||.||+|+.++++-.||+|++-+++. -...+.+|+.|-++|+|+| |.++|.+|.+...+||++
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpn------ilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPN------ILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCcc------HHhhhhheeccceeEEEE
Confidence 679999999999999999999999999976542 2346788999999999988 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||. .|+++..++......+.+..+..++.|++.| |.|||.++|+|||+||.|+.++
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~A-----------------------l~y~h~k~VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANA-----------------------LLYCHLKRVIHRDIKPENLLLG 158 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHH-----------------------HHHhccCCcccCCCCHHHhccC
Confidence 999 9999999997776678888888888888887 9999999999999999999887
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 159 -------------------------------------------------------------------------------- 158 (281)
T KOG0580|consen 159 -------------------------------------------------------------------------------- 158 (281)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCccee-ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
+.+.+|++|||.+-.. .....+.|||.-|.+||.+.+..++..+|+|++|++.||++.|.+||.
T Consensus 159 ---------------~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFe 223 (281)
T KOG0580|consen 159 ---------------SAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFE 223 (281)
T ss_pred ---------------CCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchh
Confidence 4578999999998765 445577999999999999999999999999999999999999999999
Q ss_pred ccCCCceeee-cccCCcccccccccccccCccC
Q psy2006 316 RKTKTKYFYH-GKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 316 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
..+..++|-. .+.+...+ ..|+.+|+||
T Consensus 224 s~~~~etYkrI~k~~~~~p----~~is~~a~dl 252 (281)
T KOG0580|consen 224 SQSHSETYKRIRKVDLKFP----STISGGAADL 252 (281)
T ss_pred hhhhHHHHHHHHHccccCC----cccChhHHHH
Confidence 9998888753 33333333 3577777765
No 45
>KOG0599|consensus
Probab=100.00 E-value=1.8e-36 Score=261.51 Aligned_cols=219 Identities=25% Similarity=0.376 Sum_probs=189.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---------hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---------EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~ 72 (351)
+.||.|..++|.++..+.+++.+|+|++... ..-.+...+|+.||+++. ||.+|+.+.|+|+.+..
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDVYESDAF 97 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeeeccCcch
Confidence 4689999999999999999999999999642 122345578999999985 33339999999999999
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+++|+|.| .|.|+|++.... .++|..++++|+|++++ +.|+|.++|+|||+|+.
T Consensus 98 ~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfeg-----------------------VeylHa~~IVHRDLKpE 152 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEG-----------------------VEYLHARNIVHRDLKPE 152 (411)
T ss_pred hhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHH-----------------------HHHHHHhhhhhcccChh
Confidence 99999999 899999998874 58888899999988888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
||.+.|
T Consensus 153 NILldd-------------------------------------------------------------------------- 158 (411)
T KOG0599|consen 153 NILLDD-------------------------------------------------------------------------- 158 (411)
T ss_pred heeecc--------------------------------------------------------------------------
Confidence 999884
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcce--eccccccccccceeeCceeee------cCCCCCccceeeeeee
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVIL------ELGWAQPCDVWSIGCI 303 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~--~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~~ 303 (351)
..+++|+|||++.. .+......||||.|+|||.+. ..+|+..+|+|++|++
T Consensus 159 ---------------------n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVI 217 (411)
T KOG0599|consen 159 ---------------------NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVI 217 (411)
T ss_pred ---------------------ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHH
Confidence 45799999999876 456678899999999999887 3478999999999999
Q ss_pred eEeeccccccccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 304 IFELYLGITLMARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+|.++.|-+||......--+. +|++.|....|. .+|+++|||
T Consensus 218 myTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa--dis~~~KdL 262 (411)
T KOG0599|consen 218 MYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA--DISATVKDL 262 (411)
T ss_pred HHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh--hccccHHHH
Confidence 999999999998876554432 799999999998 889999987
No 46
>KOG0589|consensus
Probab=100.00 E-value=2.1e-35 Score=275.40 Aligned_cols=199 Identities=23% Similarity=0.363 Sum_probs=179.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCe-EEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH-MCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~-~~lV 76 (351)
+++||.|+||.+++++.+.+++.|++|.+... ...++.+..|+.+++++.|++ ||.++|.|..++. +|||
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~------iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPN------IVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCC------eeeeccchhcCCceEEEE
Confidence 57899999999999999999999999999754 244557899999999999888 9999999999997 9999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|+|| ||++.+.+++.+...++++.+..++.|++.| +.|||+..|+|||+|..|+++
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~a-----------------------v~ylH~~~iLHRDlK~~Nifl 139 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLA-----------------------VNYLHENRVLHRDLKCANIFL 139 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHH-----------------------HHHHHhhhhhcccchhhhhhc
Confidence 9999 9999999999987789999999999999988 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 140 t------------------------------------------------------------------------------- 140 (426)
T KOG0589|consen 140 T------------------------------------------------------------------------------- 140 (426)
T ss_pred c-------------------------------------------------------------------------------
Confidence 7
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....|+|+|||+++..+. ...+.+|||.|++||++.+.+|+.++|+|||||++|||++=++
T Consensus 141 ----------------k~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~ 204 (426)
T KOG0589|consen 141 ----------------KDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKP 204 (426)
T ss_pred ----------------ccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccc
Confidence 345689999999987433 4567999999999999999999999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
+|...+-....
T Consensus 205 aF~a~~m~~Li 215 (426)
T KOG0589|consen 205 AFKASNMSELI 215 (426)
T ss_pred ccCccchHHHH
Confidence 99988766554
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=273.34 Aligned_cols=196 Identities=21% Similarity=0.320 Sum_probs=170.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||+||+|++..+++.||+|++.... ...+.+.+|+++++.++|+| |++++++|..++++|+||
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPF------IVNMMCSFQDENRVYFLL 97 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC------CCcEEEEEEcCCEEEEEE
Confidence 57999999999999999999999999997532 23356788999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+.
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivH~dlkp~NIll~ 152 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLA-----------------------FEYLHSKDIIYRDLKPENLLLD 152 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCCHHHEEEC
Confidence 999 899999998764 57788888888887777 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 153 -------------------------------------------------------------------------------- 152 (329)
T PTZ00263 153 -------------------------------------------------------------------------------- 152 (329)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+.+||+|||++...........||+.|+|||.+.+..++.++|+|||||++|+|++|..||.+
T Consensus 153 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 153 ---------------NKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred ---------------CCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 23568999999987655555567899999999999998899999999999999999999999987
Q ss_pred cCCCcee
Q psy2006 317 KTKTKYF 323 (351)
Q Consensus 317 ~~~~~~~ 323 (351)
.+..+.+
T Consensus 218 ~~~~~~~ 224 (329)
T PTZ00263 218 DTPFRIY 224 (329)
T ss_pred CCHHHHH
Confidence 7654443
No 48
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.8e-34 Score=266.43 Aligned_cols=195 Identities=22% Similarity=0.291 Sum_probs=166.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||+||+|.+..+++.||+|++.... ........|+++++.+.|++ |+++++.|..++++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~------i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF------LTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC------CCceEEEEEcCCEEEEEE
Confidence 57999999999999999999999999997532 22345678999999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEE
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRL 155 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l 155 (351)
||+ +++|.+++.... .+++..++.++.|++.| |+|||+ .|++|||+|+.||.+
T Consensus 75 E~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~a-----------------------L~~lH~~~~ivHrDikp~NIll 129 (325)
T cd05594 75 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSA-----------------------LDYLHSEKNVVYRDLKLENLML 129 (325)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhcCCEEecCCCCCeEEE
Confidence 999 899999887654 57888888888888888 999997 799999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (325)
T cd05594 130 D------------------------------------------------------------------------------- 130 (325)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~ 194 (325)
T cd05594 131 ----------------KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 194 (325)
T ss_pred ----------------CCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCC
Confidence 2356999999988642 222234679999999999998899999999999999999999999
Q ss_pred cccccCCCce
Q psy2006 313 LMARKTKTKY 322 (351)
Q Consensus 313 pf~~~~~~~~ 322 (351)
||.+.+..+.
T Consensus 195 Pf~~~~~~~~ 204 (325)
T cd05594 195 PFYNQDHEKL 204 (325)
T ss_pred CCCCCCHHHH
Confidence 9987765443
No 49
>KOG0582|consensus
Probab=100.00 E-value=1.2e-34 Score=265.09 Aligned_cols=199 Identities=23% Similarity=0.304 Sum_probs=174.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+-++||+|+...++++||||+++.+ +.+-+.+.+|++.|+.+.|+| |++++..|..+..+|+||+|
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPN------Iv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPN------IVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCC------cceEEEEEEecceeEEeehh
Confidence 6799999999999999999999999999864 344578899999999999988 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
| +||+.++|+.....+++|..+..+.++++.| |+|||.+|-+|||+|.+||.|.
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lka-----------------------L~YLH~~G~IHRdvKAgnILi~-- 160 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKA-----------------------LDYLHQNGHIHRDVKAGNILID-- 160 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHH-----------------------HHHHHhcCceecccccccEEEc--
Confidence 9 9999999999876678888888888888887 9999999999999999999887
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 161 -------------------------------------------------------------------------------- 160 (516)
T KOG0582|consen 161 -------------------------------------------------------------------------------- 160 (516)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcce-e--cc----ccccccccceeeCceeeec--CCCCCccceeeeeeeeEeecc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATF-D--DE----HHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~-~--~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~t 309 (351)
..+.|||+|||.+-. . +. .....+|||+|||||++.+ .+|+.|+||||||++..|+++
T Consensus 161 -------------~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~ 227 (516)
T KOG0582|consen 161 -------------SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH 227 (516)
T ss_pred -------------CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc
Confidence 356799999997532 1 11 1156799999999999654 589999999999999999999
Q ss_pred ccccccccCCCceee
Q psy2006 310 GITLMARKTKTKYFY 324 (351)
Q Consensus 310 G~~pf~~~~~~~~~~ 324 (351)
|..||.....++.+.
T Consensus 228 G~aPf~k~pPmkvLl 242 (516)
T KOG0582|consen 228 GHAPFSKYPPMKVLL 242 (516)
T ss_pred CCCCcccCChHHHHH
Confidence 999999999888653
No 50
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.3e-34 Score=275.06 Aligned_cols=195 Identities=20% Similarity=0.276 Sum_probs=165.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||+|.+..+++.||+|++.+.. .....+.+|+.+++.+.|++ |+++++.|..+.++|+||
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~------iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW------VVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC------EeeEEEEEEcCCEEEEEE
Confidence 57999999999999999999999999997532 22345678999999999888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++... .+++..++.++.|++.| |+|||+++++|||+|+.||.+.
T Consensus 123 Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~a-----------------------L~~LH~~~IvHrDLKp~NILl~ 176 (370)
T cd05621 123 EYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLA-----------------------LDAIHSMGLIHRDVKPDNMLLD 176 (370)
T ss_pred cCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHEEEC
Confidence 999 89999998764 47888888888888888 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 177 -------------------------------------------------------------------------------- 176 (370)
T cd05621 177 -------------------------------------------------------------------------------- 176 (370)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecCC----CCCccceeeeeeeeEeec
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~~l~~l~ 308 (351)
..+.+||+|||++..... ......||+.|+|||++.+.+ ++.++|+||+||++|+|+
T Consensus 177 ---------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell 241 (370)
T cd05621 177 ---------------KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 241 (370)
T ss_pred ---------------CCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHH
Confidence 235689999999875322 123567999999999987643 688999999999999999
Q ss_pred cccccccccCCCcee
Q psy2006 309 LGITLMARKTKTKYF 323 (351)
Q Consensus 309 tG~~pf~~~~~~~~~ 323 (351)
+|..||.+.+..+.+
T Consensus 242 ~G~~Pf~~~~~~~~~ 256 (370)
T cd05621 242 VGDTPFYADSLVGTY 256 (370)
T ss_pred hCCCCCCCCCHHHHH
Confidence 999999887754443
No 51
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=271.09 Aligned_cols=195 Identities=23% Similarity=0.344 Sum_probs=168.3
Q ss_pred ccccCcccceEEEEEEeecC-cEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVD-SVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~-~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.|+||.||+|.+..++ ..||+|++.... ...+.+.+|+.+++.+.|+| |++++++|...+++|+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPF------CVNLYGSFKDESYLYLV 109 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC------CcceEEEEEeCCEEEEE
Confidence 57999999999999976654 789999996532 23456778999999999887 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.+.. .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 110 ~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDLkp~NILl 164 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLI-----------------------FEYLQSLNIVYRDLKPENLLL 164 (340)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEccCCCHHHEEE
Confidence 9999 899999998764 57888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 165 ~------------------------------------------------------------------------------- 165 (340)
T PTZ00426 165 D------------------------------------------------------------------------------- 165 (340)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.++|+|||++...........||+.|+|||++.+..++.++|+||+||++|+|++|..||.
T Consensus 166 ----------------~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 166 ----------------KDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred ----------------CCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence 2356899999998765554556789999999999988889999999999999999999999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
+.+....
T Consensus 230 ~~~~~~~ 236 (340)
T PTZ00426 230 ANEPLLI 236 (340)
T ss_pred CCCHHHH
Confidence 8765443
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.5e-34 Score=262.36 Aligned_cols=195 Identities=21% Similarity=0.282 Sum_probs=166.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+.|++ |+.+++.|..++++|+|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~------iv~~~~~~~~~~~~~lv 78 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF------VVSLAYAYETKDALCLV 78 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCc------EEEEEEEEccCCeEEEE
Confidence 367999999999999999999999999997532 12235678999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.......+++..+..++.|++.| |+|||+++++|||+|+.|+.+
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~iiH~dikp~Nill 135 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG-----------------------LEDLQRERIVYRDLKPENILL 135 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEeCCCCHHHEEE
Confidence 9999 8999988876554567888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (285)
T cd05631 136 D------------------------------------------------------------------------------- 136 (285)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||++..... ......||+.|+|||.+.+..++.++|+||+||++|++++|..|
T Consensus 137 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p 200 (285)
T cd05631 137 ----------------DRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP 200 (285)
T ss_pred ----------------CCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCC
Confidence 134689999999865322 22346789999999999999999999999999999999999999
Q ss_pred ccccCC
Q psy2006 314 MARKTK 319 (351)
Q Consensus 314 f~~~~~ 319 (351)
|.+.+.
T Consensus 201 f~~~~~ 206 (285)
T cd05631 201 FRKRKE 206 (285)
T ss_pred CCCCCc
Confidence 987654
No 53
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.2e-34 Score=268.06 Aligned_cols=195 Identities=21% Similarity=0.277 Sum_probs=167.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||++.+..+++.||+|++.+.. .....+.+|+++++.+.|++ |+++++.|...+++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPF------LTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC------CcceEEEEEcCCEEEEEE
Confidence 47999999999999999999999999997532 23346678999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.||.+.
T Consensus 75 Ey~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDikp~NIll~ 129 (328)
T cd05593 75 EYVNGGELFFHLSRER--VFSEDRTRFYGAEIVSA-----------------------LDYLHSGKIVYRDLKLENLMLD 129 (328)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEecccCHHHeEEC
Confidence 999 899999887654 57888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (328)
T cd05593 130 -------------------------------------------------------------------------------- 129 (328)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.+||+|||++.... .......||+.|+|||.+.+..++.++|+||+||++|+|++|..|
T Consensus 130 ---------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~P 194 (328)
T cd05593 130 ---------------KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194 (328)
T ss_pred ---------------CCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCC
Confidence 23568999999886421 222346789999999999888899999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|...+..+.
T Consensus 195 f~~~~~~~~ 203 (328)
T cd05593 195 FYNQDHEKL 203 (328)
T ss_pred CCCCCHHHH
Confidence 987765544
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6e-35 Score=268.31 Aligned_cols=197 Identities=20% Similarity=0.296 Sum_probs=170.2
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||.|+||+||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.|+| |+++++++...+++|+|
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPF------IIRLFWTEHDQRFLYML 79 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCc------HhhhHhhhccCCeEEEE
Confidence 367999999999999999899999999997532 23456788999999999887 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++...+ .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dlkp~NIli 134 (291)
T cd05612 80 MEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCA-----------------------LEYLHSKEIVYRDLKPENILL 134 (291)
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCCHHHeEE
Confidence 9999 899999998764 57777788888887777 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 135 ~------------------------------------------------------------------------------- 135 (291)
T cd05612 135 D------------------------------------------------------------------------------- 135 (291)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+||+|||++...........||+.|+|||.+.+..++.++|+|||||++|+|++|..||.
T Consensus 136 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~ 199 (291)
T cd05612 136 ----------------KEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFF 199 (291)
T ss_pred ----------------CCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2356899999998765444455679999999999988889999999999999999999999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+.+
T Consensus 200 ~~~~~~~~ 207 (291)
T cd05612 200 DDNPFGIY 207 (291)
T ss_pred CCCHHHHH
Confidence 87765544
No 55
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.9e-34 Score=266.40 Aligned_cols=194 Identities=20% Similarity=0.334 Sum_probs=166.1
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||+|+||+||+|.+..+++.||+|++.... .......+|+.++++++|+| |++++++|...+.+|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPF------IVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCc------EeceeeEEecCCeEEEEEcC
Confidence 799999999999999999999999997532 23355678999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|+.|+.+.
T Consensus 75 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~HrDlkp~Nili~-- 127 (312)
T cd05585 75 INGGELFHHLQREG--RFDLSRARFYTAELLCA-----------------------LENLHKFNVIYRDLKPENILLD-- 127 (312)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEeCCCCHHHeEEC--
Confidence 9 999999998754 57888888888888888 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (312)
T cd05585 128 -------------------------------------------------------------------------------- 127 (312)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.++|+|||++.... .......||+.|+|||++.+..++.++|+||+||++|+|++|..||.
T Consensus 128 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 194 (312)
T cd05585 128 -------------YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY 194 (312)
T ss_pred -------------CCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcC
Confidence 23568999999886521 22234678999999999999899999999999999999999999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+.+
T Consensus 195 ~~~~~~~~ 202 (312)
T cd05585 195 DENVNEMY 202 (312)
T ss_pred CCCHHHHH
Confidence 76655443
No 56
>KOG0607|consensus
Probab=100.00 E-value=2.2e-35 Score=259.71 Aligned_cols=223 Identities=20% Similarity=0.326 Sum_probs=182.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+.||+|+|+.|-.+++.+++..||||++.+.. ..+.++.+|+.++.+.+ ||.||++|+++|+++..+|||||-+
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd~~FYLVfEKm 158 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDDTRFYLVFEKM 158 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhcccceEEEEEecc
Confidence 46999999999999999999999999998764 44678899999998875 3444999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
||+|.+.|+... .+.|..+.++...+..| |+|||.+||.|||+||.||.-.+
T Consensus 159 ~GGplLshI~~~~--~F~E~EAs~vvkdia~a-----------------------LdFlH~kgIAHRDlKPENiLC~~-- 211 (463)
T KOG0607|consen 159 RGGPLLSHIQKRK--HFNEREASRVVKDIASA-----------------------LDFLHTKGIAHRDLKPENILCES-- 211 (463)
T ss_pred cCchHHHHHHHhh--hccHHHHHHHHHHHHHH-----------------------HHHHhhcCcccccCCccceeecC--
Confidence 999999999876 56777777777777666 99999999999999999985331
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
|
T Consensus 212 --------------------p----------------------------------------------------------- 212 (463)
T KOG0607|consen 212 --------------------P----------------------------------------------------------- 212 (463)
T ss_pred --------------------C-----------------------------------------------------------
Confidence 0
Q ss_pred hccchhhhhhhccccceeeeccCCcce----------eccccccccccceeeCceeee-----cCCCCCccceeeeeeee
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATF----------DDEHHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCII 304 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~----------~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l 304 (351)
+.-+.|||+||.+... ......+.+|+..|||||++. ..-|..+.|.||||+++
T Consensus 213 -----------n~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl 281 (463)
T KOG0607|consen 213 -----------NKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL 281 (463)
T ss_pred -----------CCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHH
Confidence 1234688888887542 112334678889999999775 23568999999999999
Q ss_pred EeeccccccccccCCCce---------------e---eecccCCcccccccccccccCccCC
Q psy2006 305 FELYLGITLMARKTKTKY---------------F---YHGKLDWDEKGTAGRYVRENCKPLH 348 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (351)
|-|++|-+||.|..+.+. | .+|++.|+.+.|. -||++||+|-
T Consensus 282 YImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa--hIS~eakdli 341 (463)
T KOG0607|consen 282 YIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA--HISSEAKDLI 341 (463)
T ss_pred HHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhH--HhhHHHHHHH
Confidence 999999999999876542 1 2588899999998 8999999873
No 57
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2e-34 Score=281.92 Aligned_cols=217 Identities=30% Similarity=0.535 Sum_probs=174.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC-CeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH-GHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~-~~~~lV~E~~ 80 (351)
++||+|+||+||+|.+..+++.||||+++...........|+++++.+.+.+...+.+|+.++++|... +++|+|||++
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~ 214 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY 214 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc
Confidence 579999999999999999999999999976444455667899999999877655566699999999865 4999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEeecC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~Dfg 159 (351)
|++|.+++.+.+ .+++..++.++.|++.| |+|||+ .||+|||+|++||.+.+-|
T Consensus 215 g~~l~~~l~~~~--~l~~~~~~~i~~qi~~a-----------------------L~yLH~~~gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 215 GPCLLDWIMKHG--PFSHRHLAQIIFQTGVA-----------------------LDYFHTELHLMHTDLKPENILMETSD 269 (467)
T ss_pred CCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhcCCeecCCCCHHHEEEecCC
Confidence 999999988764 57888888888888887 999998 5999999999999987422
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
....... .+.
T Consensus 270 ~~~~~~~----------------------------------------------------------------------~~~ 279 (467)
T PTZ00284 270 TVVDPVT----------------------------------------------------------------------NRA 279 (467)
T ss_pred ccccccc----------------------------------------------------------------------ccc
Confidence 1100000 000
Q ss_pred hccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCC
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTK 319 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~ 319 (351)
+ ....+.+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 280 ~---------~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 280 L---------PPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred c---------CCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0 0123579999999887655555667899999999999999999999999999999999999999988775
Q ss_pred Cce
Q psy2006 320 TKY 322 (351)
Q Consensus 320 ~~~ 322 (351)
.+.
T Consensus 351 ~~~ 353 (467)
T PTZ00284 351 LEH 353 (467)
T ss_pred HHH
Confidence 443
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.1e-34 Score=266.77 Aligned_cols=195 Identities=18% Similarity=0.279 Sum_probs=166.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||++.+..+++.||+|++.... .......+|+++++.+.|++ |+++++.|..++++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF------LTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC------CcceeeEEecCCEEEEEE
Confidence 57999999999999999999999999997532 22345568999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|+.||.+.
T Consensus 75 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivH~Dlkp~NIll~ 129 (323)
T cd05595 75 EYANGGELFFHLSRER--VFTEERARFYGAEIVSA-----------------------LEYLHSRDVVYRDIKLENLMLD 129 (323)
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHEEEc
Confidence 999 899999887654 57888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (323)
T cd05595 130 -------------------------------------------------------------------------------- 129 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....+||+|||++.... .......||+.|+|||.+.+..++.++|+|||||++|++++|..|
T Consensus 130 ---------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~P 194 (323)
T cd05595 130 ---------------KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred ---------------CCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCC
Confidence 23568999999876421 122346789999999999988999999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|...+..+.
T Consensus 195 f~~~~~~~~ 203 (323)
T cd05595 195 FYNQDHERL 203 (323)
T ss_pred CCCCCHHHH
Confidence 987765543
No 59
>KOG0197|consensus
Probab=100.00 E-value=3.1e-34 Score=268.63 Aligned_cols=198 Identities=21% Similarity=0.240 Sum_probs=171.7
Q ss_pred CccccCcccceEEEEEEeecCc-EEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDS-VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~-~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+++||+|.||+||+|. +.+. .||+|.++......+.+.+|+++|++|+|++ ||+++++++.++-+||||||
T Consensus 211 ~~~LG~G~FG~V~~g~--~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~------lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGK--WNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEK------LVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred HHHhcCCccceEEEEE--EcCCCcccceEEeccccChhHHHHHHHHHHhCcccC------eEEEEEEEecCCceEEEEEe
Confidence 3689999999999999 4454 8999999876666788889999999999988 99999999998899999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ .|+|.++++......+...+...++.||++| ++||.+++++|||+..-||.+.
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeG-----------------------M~YLes~~~IHRDLAARNiLV~-- 337 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEG-----------------------MAYLESKNYIHRDLAARNILVD-- 337 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHH-----------------------HHHHHhCCccchhhhhhheeec--
Confidence 9 9999999998655678888888888888888 9999999999999999999887
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 338 -------------------------------------------------------------------------------- 337 (468)
T KOG0197|consen 338 -------------------------------------------------------------------------------- 337 (468)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecccccc-ccc---cceeeCceeeecCCCCCccceeeeeeeeEeecc-cccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHST-IVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~p 313 (351)
....+||+|||+++........ ..| ...|+|||.+....|+.++||||||++|||+.| |+.|
T Consensus 338 -------------~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~p 404 (468)
T KOG0197|consen 338 -------------EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVP 404 (468)
T ss_pred -------------cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCC
Confidence 2457999999999854333322 112 347899999999999999999999999999997 9999
Q ss_pred ccccCCCceee
Q psy2006 314 MARKTKTKYFY 324 (351)
Q Consensus 314 f~~~~~~~~~~ 324 (351)
+.+.+..+++.
T Consensus 405 y~~msn~ev~~ 415 (468)
T KOG0197|consen 405 YPGMSNEEVLE 415 (468)
T ss_pred CCCCCHHHHHH
Confidence 99999888763
No 60
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.3e-34 Score=270.84 Aligned_cols=195 Identities=19% Similarity=0.251 Sum_probs=164.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|.+..+++.||+|++.+.. ...+.+..|+.+++.+.|++ |++++++|..+.++|+||
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~------iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEW------IVQLHYAFQDDKYLYMVM 122 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC------cceEEEEEecCCEEEEEE
Confidence 57999999999999999999999999997532 22344678999999999888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+.
T Consensus 123 Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDLkp~NILl~ 176 (370)
T cd05596 123 EYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLA-----------------------LDAIHSMGFIHRDVKPDNMLLD 176 (370)
T ss_pred cCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHHHEEEc
Confidence 999 89999998764 47788888888888877 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 177 -------------------------------------------------------------------------------- 176 (370)
T cd05596 177 -------------------------------------------------------------------------------- 176 (370)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecC----CCCCccceeeeeeeeEeec
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILEL----GWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~~l~~l~ 308 (351)
..+.+||+|||++..... ......||+.|+|||.+.+. .++.++|+|||||++|+|+
T Consensus 177 ---------------~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell 241 (370)
T cd05596 177 ---------------KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (370)
T ss_pred ---------------CCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH
Confidence 235699999999865322 12346799999999998753 3688999999999999999
Q ss_pred cccccccccCCCcee
Q psy2006 309 LGITLMARKTKTKYF 323 (351)
Q Consensus 309 tG~~pf~~~~~~~~~ 323 (351)
+|..||.+.+..+.+
T Consensus 242 tG~~Pf~~~~~~~~~ 256 (370)
T cd05596 242 VGDTPFYADSLVGTY 256 (370)
T ss_pred hCCCCcCCCCHHHHH
Confidence 999999987765443
No 61
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.8e-34 Score=270.19 Aligned_cols=195 Identities=19% Similarity=0.266 Sum_probs=164.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||+|++..+++.||+|++.+.. .....+.+|+.+++.++|++ |+++++.|..++++|+||
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~------iv~~~~~~~~~~~~~lv~ 122 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW------VVQLFYAFQDDRYLYMVM 122 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC------CCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999999999997532 22345678999999998888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+.
T Consensus 123 Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDLkp~NIll~ 176 (371)
T cd05622 123 EYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLA-----------------------LDAIHSMGFIHRDVKPDNMLLD 176 (371)
T ss_pred cCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEeCCCCHHHEEEC
Confidence 999 89999998764 36787888888888877 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 177 -------------------------------------------------------------------------------- 176 (371)
T cd05622 177 -------------------------------------------------------------------------------- 176 (371)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecCC----CCCccceeeeeeeeEeec
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~~l~~l~ 308 (351)
..+.+||+|||++..... ......||+.|+|||++.+.. ++.++|+||+||++|+|+
T Consensus 177 ---------------~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell 241 (371)
T cd05622 177 ---------------KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (371)
T ss_pred ---------------CCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHH
Confidence 235689999999865322 123567999999999987543 688999999999999999
Q ss_pred cccccccccCCCcee
Q psy2006 309 LGITLMARKTKTKYF 323 (351)
Q Consensus 309 tG~~pf~~~~~~~~~ 323 (351)
+|..||.+.+....+
T Consensus 242 ~G~~Pf~~~~~~~~~ 256 (371)
T cd05622 242 VGDTPFYADSLVGTY 256 (371)
T ss_pred hCCCCCCCCCHHHHH
Confidence 999999887654443
No 62
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.8e-33 Score=260.44 Aligned_cols=197 Identities=22% Similarity=0.326 Sum_probs=166.3
Q ss_pred CccccCcccceEEEEEEe---ecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++.||+|+||.||++.+. .+++.||+|++.... ........|+++|++++|+| |++++++|..++++|
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~ 74 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPF------IVKLHYAFQTEGKLY 74 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCC------cccEEEEEEcCCEEE
Confidence 578999999999999864 478999999997542 23345678999999999887 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+||||+ +++|.+++.... .+++..++.++.|++.| |.|||+.+++|||+|+.|+
T Consensus 75 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dlkp~Ni 129 (318)
T cd05582 75 LILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALA-----------------------LDHLHSLGIIYRDLKPENI 129 (318)
T ss_pred EEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEecCCCCHHHe
Confidence 999999 899999987654 57888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 130 l~~----------------------------------------------------------------------------- 132 (318)
T cd05582 130 LLD----------------------------------------------------------------------------- 132 (318)
T ss_pred EEC-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.++|+|||++..... ......|++.|+|||.+.+..++.++|+|||||++|+|++|
T Consensus 133 ------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg 194 (318)
T cd05582 133 ------------------EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194 (318)
T ss_pred ------------------CCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccC
Confidence 234689999998865322 22346789999999999888889999999999999999999
Q ss_pred cccccccCCCcee
Q psy2006 311 ITLMARKTKTKYF 323 (351)
Q Consensus 311 ~~pf~~~~~~~~~ 323 (351)
..||.+.+..+.+
T Consensus 195 ~~p~~~~~~~~~~ 207 (318)
T cd05582 195 SLPFQGKDRKETM 207 (318)
T ss_pred CCCCCCCCHHHHH
Confidence 9999877654443
No 63
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-33 Score=263.18 Aligned_cols=196 Identities=18% Similarity=0.257 Sum_probs=164.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||.||+|.+..+++.||+|++.... ...+....|..++..+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~------i~~~~~~~~~~~~~~lv 74 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPF------LTALHCCFQTKDRLFFV 74 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCC------ccceeeEEEcCCeEEEE
Confidence 57999999999999998899999999997532 2234556788888876 4555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+.+.... .+++..++.++.|++.| |.|||++|++|||+|+.|+.+
T Consensus 75 ~E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDikp~Nill 129 (321)
T cd05591 75 MEYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLA-----------------------LMFLHRHGVIYRDLKLDNILL 129 (321)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHHHeEE
Confidence 9999 899999987664 57777888888888777 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (321)
T cd05591 130 D------------------------------------------------------------------------------- 130 (321)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~ 194 (321)
T cd05591 131 ----------------AEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQP 194 (321)
T ss_pred ----------------CCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCC
Confidence 2356899999988642 222344678999999999988899999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 195 Pf~~~~~~~~~ 205 (321)
T cd05591 195 PFEADNEDDLF 205 (321)
T ss_pred CCCCCCHHHHH
Confidence 99987765554
No 64
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.8e-34 Score=263.70 Aligned_cols=196 Identities=19% Similarity=0.302 Sum_probs=163.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|+++... ...+....|..++..+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~------i~~~~~~~~~~~~~~lv 74 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPF------LTHLFCTFQTKEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCC------ccceeeEEEcCCEEEEE
Confidence 57999999999999999999999999997542 2233445677777654 4555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |.|||+++++|||+|+.|+.+
T Consensus 75 ~e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~a-----------------------l~~LH~~~ivH~dlkp~Nill 129 (316)
T cd05592 75 MEYLNGGDLMFHIQSSG--RFDEARARFYAAEIICG-----------------------LQFLHKKGIIYRDLKLDNVLL 129 (316)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEeCCCCHHHeEE
Confidence 9999 899999987754 57888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (316)
T cd05592 130 D------------------------------------------------------------------------------- 130 (316)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... .......+||+.|+|||.+.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~ 194 (316)
T cd05592 131 ----------------KDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred ----------------CCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCC
Confidence 2356899999998642 222345678999999999998889999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 195 Pf~~~~~~~~~ 205 (316)
T cd05592 195 PFHGEDEDELF 205 (316)
T ss_pred CCCCCCHHHHH
Confidence 99887655443
No 65
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5e-34 Score=265.37 Aligned_cols=196 Identities=19% Similarity=0.302 Sum_probs=164.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||.||+|.++.+++.||+|+++... ...+....|..++..+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~------i~~~~~~~~~~~~~~lv 74 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPF------LTHLYCTFQTKEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCC------ccCeeEEEEeCCEEEEE
Confidence 57999999999999999999999999997642 2234556788888764 5555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 75 ~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivHrDlkp~Nil~ 129 (316)
T cd05620 75 MEFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCG-----------------------LQFLHSKGIIYRDLKLDNVML 129 (316)
T ss_pred ECCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHeEE
Confidence 9999 899999987754 57788888888888887 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (316)
T cd05620 130 D------------------------------------------------------------------------------- 130 (316)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~ 194 (316)
T cd05620 131 ----------------RDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred ----------------CCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCC
Confidence 2356899999987642 223345678999999999999999999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 195 Pf~~~~~~~~~ 205 (316)
T cd05620 195 PFHGDDEDELF 205 (316)
T ss_pred CCCCCCHHHHH
Confidence 99887665544
No 66
>KOG0662|consensus
Probab=100.00 E-value=3.7e-34 Score=233.56 Aligned_cols=198 Identities=22% Similarity=0.318 Sum_probs=173.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh---hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+|+||+|.||+||+|+++.+.+.||+|.+..+.+ ...++.+|+-+|+.|+|.| ||+++|....+..+.+|+
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkn------ivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN------IVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcc------eeehhhhhccCceeEEeH
Confidence 5899999999999999999999999999986532 3457899999999999988 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|||..+|..+....+ ..+....+++++.|++.| |.+||++++.|||+||.|+.+.
T Consensus 81 e~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrg-----------------------l~fchshnvlhrdlkpqnllin- 135 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRG-----------------------LGFCHSHNVLHRDLKPQNLLIN- 135 (292)
T ss_pred HHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhh-----------------------hhhhhhhhhhhccCCcceEEec-
Confidence 999999999998876 467888888888888888 9999999999999999998776
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (292)
T KOG0662|consen 136 -------------------------------------------------------------------------------- 135 (292)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecccccc---ccccceeeCceeeecCC-CCCccceeeeeeeeEeec-cccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHST---IVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELY-LGIT 312 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~---~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~-tG~~ 312 (351)
..+.+|++|||+++-.+-+..+ -+-|.+|++|.++++.. |+...|+||.||++.|+. .|++
T Consensus 136 --------------~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 136 --------------RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred --------------cCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence 3567999999998765544432 34578999999999876 599999999999999999 6999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
+|.+.+-.+.+
T Consensus 202 lfpg~dvddql 212 (292)
T KOG0662|consen 202 LFPGNDVDDQL 212 (292)
T ss_pred CCCCCcHHHHH
Confidence 99999877754
No 67
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.6e-33 Score=261.53 Aligned_cols=196 Identities=18% Similarity=0.266 Sum_probs=163.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHH-HHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEIN-ALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||+||+|.+..+++.||+|++.+.. ........|.. +++.++|+| |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~------iv~~~~~~~~~~~~~lv 74 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPF------LVGLHYSFQTTEKLYFV 74 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCC------CccEEEEEecCCEEEEE
Confidence 57999999999999999999999999997532 22234455554 466788777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|..++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 75 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------l~~lH~~givH~Dlkp~NIll 129 (325)
T cd05604 75 LDFVNGGELFFHLQRER--SFPEPRARFYAAEIASA-----------------------LGYLHSINIVYRDLKPENILL 129 (325)
T ss_pred EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCCHHHeEE
Confidence 9999 899999887654 57888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (325)
T cd05604 130 D------------------------------------------------------------------------------- 130 (325)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... ........||+.|+|||.+.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~ 194 (325)
T cd05604 131 ----------------SQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred ----------------CCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCC
Confidence 2356899999988642 222345678999999999999899999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||...+..+.+
T Consensus 195 pf~~~~~~~~~ 205 (325)
T cd05604 195 PFYCRDVAEMY 205 (325)
T ss_pred CCCCCCHHHHH
Confidence 99887655543
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-33 Score=265.09 Aligned_cols=219 Identities=20% Similarity=0.266 Sum_probs=161.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|.+..+++.||+|++.... .....+..|+.++..+.|++ |++++++|...+++|+||
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW------IVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCC------ccchhhheecCCeEEEEE
Confidence 67999999999999999899999999997542 23456778999999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe---
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI--- 153 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni--- 153 (351)
||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|+.||
T Consensus 81 e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~a-----------------------L~~LH~~giiH~Dlkp~NIll~ 135 (350)
T cd05573 81 EYMPGGDLMNLLIRKD--VFPEETARFYIAELVLA-----------------------LDSVHKLGFIHRDIKPDNILID 135 (350)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHHHeEEC
Confidence 999 899999998763 67888888888888888 9999999999999998876
Q ss_pred -----EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 154 -----RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 154 -----~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
+|+|||++...........-.. . .. . ..
T Consensus 136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~--~---~~----~----------------------------------~~---- 168 (350)
T cd05573 136 ADGHIKLADFGLCKKMNKAKDREYYLN--D---SH----N----------------------------------LL---- 168 (350)
T ss_pred CCCCEEeecCCCCccCcccCccccccc--c---cc----c----------------------------------cc----
Confidence 5666666643222110000000 0 00 0 00
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
.........- .............||+.|+|||.+.+..++.++|+|||||++|+|+
T Consensus 169 -----------------------~~~~~~~~~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 169 -----------------------FRDNVLVRRR-DHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred -----------------------cccccccccc-ccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc
Confidence 0000000000 0000011223467899999999999999999999999999999999
Q ss_pred cccccccccCCCce
Q psy2006 309 LGITLMARKTKTKY 322 (351)
Q Consensus 309 tG~~pf~~~~~~~~ 322 (351)
+|..||...+..+.
T Consensus 225 ~g~~Pf~~~~~~~~ 238 (350)
T cd05573 225 YGFPPFYSDTLQET 238 (350)
T ss_pred cCCCCCCCCCHHHH
Confidence 99999988765443
No 69
>KOG4717|consensus
Probab=100.00 E-value=3.2e-34 Score=265.86 Aligned_cols=220 Identities=19% Similarity=0.292 Sum_probs=188.3
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
-||+|.|+.|-+|++--+|+.||||++.+.. -....+..|++.|+.++|+| ||+||++...+..+|||+|.
T Consensus 25 TlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpN------iVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 25 TLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPN------IVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred hhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcC------eeeeeehhcccceEEEEEEe
Confidence 4999999999999999999999999998643 34567789999999999888 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
= +|+|+|||.... .++.|+.+++++.||+.| +.|||.-.++|||+||.|+..-.
T Consensus 99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~A-----------------------I~YCHqLHVVHRDLKPENVVFFE- 153 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHA-----------------------ISYCHQLHVVHRDLKPENVVFFE- 153 (864)
T ss_pred cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHH-----------------------HHHHhhhhhhcccCCcceeEEee-
Confidence 9 899999998875 368888888888888888 99999999999999999986541
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 154 -------------------------------------------------------------------------------- 153 (864)
T KOG4717|consen 154 -------------------------------------------------------------------------------- 153 (864)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcce--eccccccccccceeeCceeeecCCC-CCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
.-+-|||+|||++.. ++....+.||+..|-|||++++..| .+++||||||+++|-|++|++||.
T Consensus 154 -------------KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFq 220 (864)
T KOG4717|consen 154 -------------KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQ 220 (864)
T ss_pred -------------ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccc
Confidence 235699999999753 5677889999999999999999998 677899999999999999999999
Q ss_pred ccCCCceeeecccCCcccccccccccccCccCCC
Q psy2006 316 RKTKTKYFYHGKLDWDEKGTAGRYVRENCKPLHH 349 (351)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (351)
..++.|.+.- .-+++-....-|+.+|++|-+
T Consensus 221 eANDSETLTm---ImDCKYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 221 EANDSETLTM---IMDCKYTVPSHVSKECRDLIQ 251 (864)
T ss_pred cccchhhhhh---hhcccccCchhhhHHHHHHHH
Confidence 9999988641 133333444468888888743
No 70
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.1e-33 Score=261.88 Aligned_cols=195 Identities=20% Similarity=0.324 Sum_probs=163.9
Q ss_pred CccccCcccceEEEEEEe---ecCcEEEEEEecchh-----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCe
Q psy2006 1 MCSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE-----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~ 72 (351)
+++||+|+||.||++.+. .+++.||+|++.... ........|+.+|+.+.|+| |+++++.|..+++
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~------iv~~~~~~~~~~~ 74 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF------IVDLIYAFQTGGK 74 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCc------hhceeeEEecCCe
Confidence 578999999999999864 478999999997532 22345678999999999887 9999999999999
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+|+||||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|+.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~ 129 (323)
T cd05584 75 LYLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLA-----------------------LEHLHQQGIIYRDLKPE 129 (323)
T ss_pred EEEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHH
Confidence 99999999 889999998764 46777777777777777 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 130 Nil~~--------------------------------------------------------------------------- 134 (323)
T cd05584 130 NILLD--------------------------------------------------------------------------- 134 (323)
T ss_pred HeEEC---------------------------------------------------------------------------
Confidence 99876
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
..+.+||+|||++... ........||+.|+|||.+.+..++.++|+|||||++|+|+
T Consensus 135 --------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 194 (323)
T cd05584 135 --------------------AQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDML 194 (323)
T ss_pred --------------------CCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHh
Confidence 2356899999987642 12223457899999999998888899999999999999999
Q ss_pred cccccccccCCCc
Q psy2006 309 LGITLMARKTKTK 321 (351)
Q Consensus 309 tG~~pf~~~~~~~ 321 (351)
+|..||.+.+..+
T Consensus 195 ~G~~pf~~~~~~~ 207 (323)
T cd05584 195 TGAPPFTAENRKK 207 (323)
T ss_pred cCCCCCCCCCHHH
Confidence 9999998776544
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.4e-33 Score=262.28 Aligned_cols=189 Identities=17% Similarity=0.268 Sum_probs=162.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++++.. ...+.+..|..+++.+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~------Iv~~~~~~~~~~~~~lv 74 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPF------LVGLHSCFQTESRLFFV 74 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCC------CCceEEEEEcCCEEEEE
Confidence 57999999999999999999999999997532 2234567899999988 4666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++...+ .+++..++.++.|++.| |.|||++|++|||+|+.|+.+
T Consensus 75 ~e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~Nili 129 (329)
T cd05588 75 IEFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLA-----------------------LNFLHERGIIYRDLKLDNVLL 129 (329)
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHeEE
Confidence 9999 899999887654 67888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (329)
T cd05588 130 D------------------------------------------------------------------------------- 130 (329)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....+||+|||++... ........||+.|+|||++.+..++.++|+||+||++|++++|..
T Consensus 131 ----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~ 194 (329)
T cd05588 131 ----------------AEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 194 (329)
T ss_pred ----------------CCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCC
Confidence 2356899999988642 223345678999999999999899999999999999999999999
Q ss_pred cccc
Q psy2006 313 LMAR 316 (351)
Q Consensus 313 pf~~ 316 (351)
||+.
T Consensus 195 Pf~~ 198 (329)
T cd05588 195 PFDI 198 (329)
T ss_pred Cccc
Confidence 9974
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-33 Score=263.42 Aligned_cols=196 Identities=18% Similarity=0.268 Sum_probs=164.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.++.+++.||+|++.+.. ...+....|..++..+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~------iv~~~~~~~~~~~~~iv 74 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF------LTQLYCCFQTPDRLFFV 74 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCc------hhceeeEEEcCCEEEEE
Confidence 57999999999999999999999999997532 2234556788888876 3555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.| |+|||+++++|||+|+.|+.+
T Consensus 75 ~Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~-----------------------L~~lH~~~ivH~dlkp~NIli 129 (320)
T cd05590 75 MEFVNGGDLMFHIQKSR--RFDEARARFYAAEITSA-----------------------LMFLHDKGIIYRDLKLDNVLL 129 (320)
T ss_pred EcCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeCCCCHHHeEE
Confidence 9999 899999987764 57788888888888887 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (320)
T cd05590 130 D------------------------------------------------------------------------------- 130 (320)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||++... ........||+.|+|||.+.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (320)
T cd05590 131 ----------------HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHA 194 (320)
T ss_pred ----------------CCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCC
Confidence 2356899999987642 223345678999999999988889999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+++
T Consensus 195 Pf~~~~~~~~~ 205 (320)
T cd05590 195 PFEAENEDDLF 205 (320)
T ss_pred CCCCCCHHHHH
Confidence 99887765543
No 73
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.5e-33 Score=261.36 Aligned_cols=196 Identities=20% Similarity=0.253 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||++++..+++.||+|++.+.. .....+..|+.+++.+.|++ |+++++.|...++.|+||
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW------ITTLHYAFQDENYLYLVM 80 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCC------EeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999999999997532 22344677899999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ |++|.+++.... ..+++..++.++.|++.+ |+|||+++++|||+|+.|+.+.
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~-----------------------L~~lH~~~iiHrDlkp~Nill~ 136 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLA-----------------------IHSIHQLHYVHRDIKPDNVLLD 136 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeccCchHHEEEc
Confidence 999 999999998753 357888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (331)
T cd05624 137 -------------------------------------------------------------------------------- 136 (331)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeec-----CCCCCccceeeeeeeeEee
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~l 307 (351)
..+.+||+|||++...... .....||+.|+|||.+.+ ..++.++|+||+||++|+|
T Consensus 137 ---------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 137 ---------------MNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred ---------------CCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 2346899999998653221 123578999999998875 4578899999999999999
Q ss_pred ccccccccccCCCce
Q psy2006 308 YLGITLMARKTKTKY 322 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~ 322 (351)
++|..||...+..+.
T Consensus 202 l~g~~Pf~~~~~~~~ 216 (331)
T cd05624 202 LYGETPFYAESLVET 216 (331)
T ss_pred hhCCCCccCCCHHHH
Confidence 999999987665443
No 74
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-33 Score=260.83 Aligned_cols=193 Identities=21% Similarity=0.332 Sum_probs=163.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+.|+| |+++++++....+.|+|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHAN------IVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCC------cCeEEEEEecCCeEEEEEE
Confidence 368999999999999998899999999997532 22345678999999999887 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.| |+|||++|++|||+|++|+.+.+
T Consensus 84 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivH~dlkp~Nill~~- 138 (303)
T cd07869 84 YVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRG-----------------------LSYIHQRYILHRDLKPQNLLISD- 138 (303)
T ss_pred CCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEECC-
Confidence 99999999987653 357778888888888887 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (303)
T cd07869 139 -------------------------------------------------------------------------------- 138 (303)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
.+.+||+|||++.... .......+|+.|+|||++.+. .++.++|+||+||++|+|++|..||
T Consensus 139 --------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 204 (303)
T cd07869 139 --------------TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF 204 (303)
T ss_pred --------------CCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 3468999999886432 223346788999999998764 5788999999999999999999999
Q ss_pred cccC
Q psy2006 315 ARKT 318 (351)
Q Consensus 315 ~~~~ 318 (351)
.+..
T Consensus 205 ~~~~ 208 (303)
T cd07869 205 PGMK 208 (303)
T ss_pred CCCc
Confidence 8754
No 75
>KOG0604|consensus
Probab=100.00 E-value=1.9e-34 Score=251.83 Aligned_cols=220 Identities=21% Similarity=0.296 Sum_probs=187.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC----CeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH----GHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~----~~~~lV~ 77 (351)
+.||-|-.|.|-.+.++.+++.+|+|++.. ...+.+|+.+.-..+ ||.|||+++|+|+.. ..+.+||
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D----s~KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD----SPKARREVELHWMAS-----GHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc----CHHHHhHhhhhhhhc-----CCCceEEeehhhhhhccCceeeEeee
Confidence 469999999999999999999999999975 345667777654432 333499999999754 3899999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
|.+ ||.|++.++..+...+.|..|-.|++||..| +.|||+.+|.|||+|+.|+.-.
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~A-----------------------v~~lH~~nIAHRDlKpENLLyt 195 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA-----------------------VRYLHSMNIAHRDLKPENLLYT 195 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHH-----------------------HHHHHhcchhhccCChhheeee
Confidence 999 9999999999998889999999999999998 9999999999999999998766
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+-+
T Consensus 196 ~t~----------------------------------------------------------------------------- 198 (400)
T KOG0604|consen 196 TTS----------------------------------------------------------------------------- 198 (400)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 211
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec--cccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....+||+|||+++... ....+.+.||.|.|||++-...|....|+||+|+++|-|++|-+||
T Consensus 199 ---------------~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 199 ---------------PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred ---------------CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 24578999999998644 5667888999999999998888999999999999999999999999
Q ss_pred cccCCCcee-------eecccCCcccccccccccccCccC
Q psy2006 315 ARKTKTKYF-------YHGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 315 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
++....-+. ..|.+.|+..+|. .||++||||
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs--~VSe~aKdl 301 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWS--CVSEAAKDL 301 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHh--HHHHHHHHH
Confidence 998765443 3588888888887 999999986
No 76
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-33 Score=259.57 Aligned_cols=197 Identities=23% Similarity=0.370 Sum_probs=165.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||+||+|.+..+++.||+|+++... .....+.+|+++++.++|+| |+++++++...+..++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHAN------IVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCC------EeeEEEEEcCCCeEEEEEe
Confidence 367999999999999999999999999997532 23346678999999999887 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.| |+|||++|++|||+|+.|+.+.
T Consensus 84 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivH~dlkp~Nil~~-- 137 (288)
T cd07871 84 YLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRG-----------------------LSYCHKRKILHRDLKPQNLLIN-- 137 (288)
T ss_pred CCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHHEEEC--
Confidence 99889999987654 346777888888888887 9999999999999999999886
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (288)
T cd07871 138 -------------------------------------------------------------------------------- 137 (288)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
..+.+||+|||++..... ......+++.|+|||.+.+ ..++.++|+||+||++|+|+||.+||
T Consensus 138 -------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf 204 (288)
T cd07871 138 -------------EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMF 204 (288)
T ss_pred -------------CCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 235689999999865322 2234567899999999876 46789999999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
.+.+..+.
T Consensus 205 ~~~~~~~~ 212 (288)
T cd07871 205 PGSTVKEE 212 (288)
T ss_pred CCCCHHHH
Confidence 88765443
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.6e-33 Score=262.87 Aligned_cols=198 Identities=17% Similarity=0.272 Sum_probs=165.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||.|+||.||+|.+..+++.||+|++.+.. ...+.+..|+.++..+.|.+ +|+.++++|...+++|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-----~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP-----FLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC-----ceeeeEEEEEcCCEEEEE
Confidence 367999999999999998899999999997532 23355678999999887543 288999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 80 ~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivH~dlkp~Nill 134 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIG-----------------------LFFLHSKGIIYRDLKLDNVML 134 (324)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHeEE
Confidence 9999 899999987754 57777888888888777 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 135 ~------------------------------------------------------------------------------- 135 (324)
T cd05587 135 D------------------------------------------------------------------------------- 135 (324)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|+||..
T Consensus 136 ----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~ 199 (324)
T cd05587 136 ----------------AEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 199 (324)
T ss_pred ----------------CCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCC
Confidence 2356899999987642 222334678999999999999999999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 200 pf~~~~~~~~~ 210 (324)
T cd05587 200 PFDGEDEDELF 210 (324)
T ss_pred CCCCCCHHHHH
Confidence 99877655443
No 78
>KOG0574|consensus
Probab=100.00 E-value=7.3e-35 Score=254.62 Aligned_cols=197 Identities=22% Similarity=0.287 Sum_probs=170.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||+|+||+||+|+++++|..+|||.+..+ .+-+++..|+.||++..+++ ||++|+.|--+..+|||||||
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~y------VVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKY------VVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCch------hhhhhhhhccCCceEeehhhc
Confidence 46899999999999999999999999999864 34567889999999998777 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
.||+.|.++..+ .++.++.+..+++..+.| |+|||....+|||+|.+||.|.
T Consensus 111 GAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKG-----------------------L~YLH~~~KIHRDIKAGNILLN--- 163 (502)
T KOG0574|consen 111 GAGSISDIMRARR-KPLSEQEISAVLRDTLKG-----------------------LQYLHDLKKIHRDIKAGNILLN--- 163 (502)
T ss_pred CCCcHHHHHHHhc-CCccHHHHHHHHHHHHhH-----------------------HHHHHHHHHHHhhcccccEEEc---
Confidence 799999988764 456666666666666655 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 164 -------------------------------------------------------------------------------- 163 (502)
T KOG0574|consen 164 -------------------------------------------------------------------------------- 163 (502)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+..||+|||.+...+. ..++.+|||.|||||++..-+|..++||||||++..||+-|++||..
T Consensus 164 ------------T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD 231 (502)
T KOG0574|consen 164 ------------TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD 231 (502)
T ss_pred ------------ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence 246789999999977543 34678999999999999999999999999999999999999999987
Q ss_pred cCCCcee
Q psy2006 317 KTKTKYF 323 (351)
Q Consensus 317 ~~~~~~~ 323 (351)
--.+..+
T Consensus 232 IHPMRAI 238 (502)
T KOG0574|consen 232 IHPMRAI 238 (502)
T ss_pred cccccee
Confidence 6666554
No 79
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.3e-33 Score=260.25 Aligned_cols=194 Identities=19% Similarity=0.267 Sum_probs=161.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHH-HHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEIN-ALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||+||+|++..+++.||+|++.+.. .....+..|.. +++.+.|+| |+++++.|...+..|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~------iv~~~~~~~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPF------LVGLHYSFQTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCC------ccceeeEEEcCCEEEEE
Confidence 57999999999999999999999999997532 22234455554 577888777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+.+.... .+++..++.++.|++.| |.|||+.|++|||+|+.||.+
T Consensus 75 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~ivH~Dlkp~NIll 129 (321)
T cd05603 75 LDYVNGGELFFHLQRER--CFLEPRARFYAAEVASA-----------------------IGYLHSLNIIYRDLKPENILL 129 (321)
T ss_pred EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeccCCHHHeEE
Confidence 9999 889998887654 57788888888888887 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (321)
T cd05603 130 D------------------------------------------------------------------------------- 130 (321)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... ........||+.|+|||.+.+..++.++|+|||||++|+|++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (321)
T cd05603 131 ----------------SQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP 194 (321)
T ss_pred ----------------CCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCC
Confidence 2356899999988642 222334678999999999988889999999999999999999999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||.+.+..+
T Consensus 195 pf~~~~~~~ 203 (321)
T cd05603 195 PFYSRDVSQ 203 (321)
T ss_pred CCCCCCHHH
Confidence 998876443
No 80
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.6e-33 Score=261.49 Aligned_cols=195 Identities=18% Similarity=0.270 Sum_probs=161.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHH-HHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEIN-ALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|++..+++.||+|++.... ........|.. +++.+.|++ |++++++|...+.+|+|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~------Iv~~~~~~~~~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF------LVGLHFSFQTADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCC------CCceeEEEEcCCeEEEE
Confidence 57999999999999999999999999997532 11223344444 467787777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||+.|++|||+|+.|+.+
T Consensus 75 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~-----------------------L~~lH~~giiHrDlkp~Nili 129 (325)
T cd05602 75 LDYINGGELFYHLQRER--CFLEPRARFYAAEIASA-----------------------LGYLHSLNIVYRDLKPENILL 129 (325)
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHeEE
Confidence 9999 889999997754 57777888888888887 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (325)
T cd05602 130 D------------------------------------------------------------------------------- 130 (325)
T ss_pred C-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (325)
T cd05602 131 ----------------SQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred ----------------CCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCC
Confidence 2346899999988642 222345679999999999999899999999999999999999999
Q ss_pred cccccCCCce
Q psy2006 313 LMARKTKTKY 322 (351)
Q Consensus 313 pf~~~~~~~~ 322 (351)
||.+.+..+.
T Consensus 195 pf~~~~~~~~ 204 (325)
T cd05602 195 PFYSRNTAEM 204 (325)
T ss_pred CCCCCCHHHH
Confidence 9987765543
No 81
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.6e-33 Score=259.21 Aligned_cols=196 Identities=20% Similarity=0.236 Sum_probs=165.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|.+..+++.||+|++..... ..+.+..|+.+++.+.|++ |+++++.|...+++|+||
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~------i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPW------IPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC------CcceeeEEecCCeEEEEE
Confidence 579999999999999999999999999986432 3455778999999998777 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.+.. ..+++..++.++.|++.+ |.|||+.+++|||+|+.|+.+.
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~a-----------------------L~~lH~~~i~H~Dlkp~NIll~ 136 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLA-----------------------IHSVHQMGYVHRDIKPENVLID 136 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEcccCchHheEEC
Confidence 999 999999998763 367888888888888888 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (330)
T cd05601 137 -------------------------------------------------------------------------------- 136 (330)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeee------cCCCCCccceeeeeeeeEe
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVIL------ELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~~l~~ 306 (351)
..+.+||+|||++...... .....||+.|+|||++. ...++.++|+|||||++|+
T Consensus 137 ---------------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 201 (330)
T cd05601 137 ---------------RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE 201 (330)
T ss_pred ---------------CCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence 2356899999998653221 12357899999999987 3456789999999999999
Q ss_pred eccccccccccCCCce
Q psy2006 307 LYLGITLMARKTKTKY 322 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~ 322 (351)
|++|..||...+..+.
T Consensus 202 l~~g~~Pf~~~~~~~~ 217 (330)
T cd05601 202 MIYGRSPFHEGTSAKT 217 (330)
T ss_pred eccCCCCCCCCCHHHH
Confidence 9999999987765544
No 82
>KOG0586|consensus
Probab=100.00 E-value=3.1e-33 Score=264.99 Aligned_cols=195 Identities=21% Similarity=0.332 Sum_probs=170.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
..||.|.|++|.+|++..++..||||++++.. .......+|+++|..|.|+| ||+++.+.+....+|+|||
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPn------Ivkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPN------IVKLFSVIETEATLYLVME 135 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcc------eeeeeeeeeecceeEEEEE
Confidence 57999999999999999999999999998753 33345789999999999988 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +|.+++++...+ ++.+..++.++.|+..+ ++|||+++++|||+|..|+.|.
T Consensus 136 ya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsa-----------------------veYcH~k~ivHrdLk~eNilL~- 189 (596)
T KOG0586|consen 136 YASGGELFDYLVKHG--RMKEKEARAKFRQIVSA-----------------------VEYCHSKNIVHRDLKAENILLD- 189 (596)
T ss_pred eccCchhHHHHHhcc--cchhhhhhhhhHHHHHH-----------------------HHHHhhcceeccccchhhcccc-
Confidence 99 999999999886 45566677777766666 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 190 -------------------------------------------------------------------------------- 189 (596)
T KOG0586|consen 190 -------------------------------------------------------------------------------- 189 (596)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCCC-CCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++||+|||++.+. .....+.+|++.|.|||++.+..+ ++.+|+||+|+++|.++.|..||
T Consensus 190 --------------~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF 255 (596)
T KOG0586|consen 190 --------------ENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF 255 (596)
T ss_pred --------------cccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence 2346999999999774 445578999999999999999888 88999999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
++.+-.+.
T Consensus 256 DG~~lk~L 263 (596)
T KOG0586|consen 256 DGQNLKEL 263 (596)
T ss_pred CCcccccc
Confidence 99875443
No 83
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.5e-33 Score=259.79 Aligned_cols=194 Identities=21% Similarity=0.313 Sum_probs=159.8
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHh---CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKI---GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l---~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
||+|+||+||+|++..+++.||+|++.+... .......|..++..+ .|++ |+.+++.|....++|+|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~------i~~~~~~~~~~~~~~lv 74 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPF------IVGLKFSFQTDSDLYLV 74 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCc------CcceEEEEecCCeEEEE
Confidence 7999999999999999999999999975321 222345577777665 3444 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 75 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~a-----------------------l~~LH~~~ivHrDlkp~Nili 129 (330)
T cd05586 75 TDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLA-----------------------LEHLHKYDIVYRDLKPENILL 129 (330)
T ss_pred EcCCCCChHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeccCCHHHeEE
Confidence 9999 899999987754 57888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (330)
T cd05586 130 D------------------------------------------------------------------------------- 130 (330)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.++|+|||++... .......+||+.|+|||.+.+. .++.++|+||+||++|+|++|.
T Consensus 131 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~ 194 (330)
T cd05586 131 ----------------ATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGW 194 (330)
T ss_pred ----------------CCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCC
Confidence 2346899999987642 2223456799999999998764 4789999999999999999999
Q ss_pred ccccccCCCcee
Q psy2006 312 TLMARKTKTKYF 323 (351)
Q Consensus 312 ~pf~~~~~~~~~ 323 (351)
.||.+.+..+.+
T Consensus 195 ~Pf~~~~~~~~~ 206 (330)
T cd05586 195 SPFYAEDTQQMY 206 (330)
T ss_pred CCCCCCCHHHHH
Confidence 999887655543
No 84
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.1e-33 Score=259.91 Aligned_cols=195 Identities=18% Similarity=0.269 Sum_probs=162.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHH-HHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEIN-ALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++.... .....+..|.. +++.++|++ |+++++.|...+..|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~------iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPF------LVGLHYSFQTADKLYFV 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCC------CCCeeEEEEeCCEEEEE
Confidence 57999999999999999999999999997532 12233445554 457788777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 75 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~givH~dikp~NIll 129 (323)
T cd05575 75 LDYVNGGELFFHLQRER--SFPEPRARFYAAEIASA-----------------------LGYLHSLNIIYRDLKPENILL 129 (323)
T ss_pred EcCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEeCCCCHHHeEE
Confidence 9999 899999988754 57788888888888887 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (323)
T cd05575 130 D------------------------------------------------------------------------------- 130 (323)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... ........||+.|+|||.+.+..++.++|+|||||++|+|++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 194 (323)
T cd05575 131 ----------------SQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLP 194 (323)
T ss_pred ----------------CCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCC
Confidence 2356899999987642 222334678999999999998899999999999999999999999
Q ss_pred cccccCCCce
Q psy2006 313 LMARKTKTKY 322 (351)
Q Consensus 313 pf~~~~~~~~ 322 (351)
||.+.+..+.
T Consensus 195 pf~~~~~~~~ 204 (323)
T cd05575 195 PFYSRDTAEM 204 (323)
T ss_pred CCCCCCHHHH
Confidence 9988765443
No 85
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5e-33 Score=259.86 Aligned_cols=191 Identities=17% Similarity=0.268 Sum_probs=163.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++.+.. ...+.+..|+.++..+. |++ |+.++++|...+++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------i~~~~~~~~~~~~~~lv 74 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPF------LVGLHSCFQTTSRLFLV 74 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCC------EeeEEEEEEeCCEEEEE
Confidence 57999999999999999999999999998642 23345678999998884 455 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 75 ~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivHrDlkp~Nili 129 (327)
T cd05617 75 IEYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIA-----------------------LNFLHERGIIYRDLKLDNVLL 129 (327)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHHHEEE
Confidence 9999 899999887654 57888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (327)
T cd05617 130 D------------------------------------------------------------------------------- 130 (327)
T ss_pred e-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... .......+||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~ 194 (327)
T cd05617 131 ----------------ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS 194 (327)
T ss_pred ----------------CCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCC
Confidence 2356999999988642 223345679999999999999899999999999999999999999
Q ss_pred cccccC
Q psy2006 313 LMARKT 318 (351)
Q Consensus 313 pf~~~~ 318 (351)
||...+
T Consensus 195 pf~~~~ 200 (327)
T cd05617 195 PFDIIT 200 (327)
T ss_pred CCCccC
Confidence 997543
No 86
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2e-33 Score=261.33 Aligned_cols=196 Identities=19% Similarity=0.292 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++.... ...+....|..+++.+ .|++ |++++++|...+++++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~------iv~~~~~~~~~~~~~lv 74 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF------LTHLYCTFQTKENLFFV 74 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCc------CcceEEEEEeCCEEEEE
Confidence 57999999999999999999999999997642 2234456788888764 6666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|+.|+.+
T Consensus 75 ~ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------l~~LH~~~ivHrdikp~Nil~ 129 (316)
T cd05619 75 MEYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICG-----------------------LQFLHSKGIVYRDLKLDNILL 129 (316)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEeCCCCHHHEEE
Confidence 9999 899999998754 57777888888888877 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (316)
T cd05619 130 D------------------------------------------------------------------------------- 130 (316)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||++... ........||+.|+|||.+.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~ 194 (316)
T cd05619 131 ----------------TDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred ----------------CCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCC
Confidence 2346899999988642 122344678999999999988889999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 195 pf~~~~~~~~~ 205 (316)
T cd05619 195 PFHGHDEEELF 205 (316)
T ss_pred CCCCCCHHHHH
Confidence 99887655543
No 87
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.6e-33 Score=259.77 Aligned_cols=188 Identities=17% Similarity=0.283 Sum_probs=161.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++.+.. .....+.+|+.++..+ .|++ |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~------iv~~~~~~~~~~~~~lv 74 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF------LVGLHSCFQTESRLFFV 74 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCc------CCceeeEEEeCCEEEEE
Confidence 57999999999999999999999999997532 2334567888888876 5666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..++.++.|++.| |.|||+++++|||+|+.|+.+
T Consensus 75 ~E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~-----------------------l~~lH~~~ivH~Dikp~Nili 129 (329)
T cd05618 75 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLA-----------------------LNYLHERGIIYRDLKLDNVLL 129 (329)
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeCCCCHHHEEE
Confidence 9999 899999887654 57888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (329)
T cd05618 130 D------------------------------------------------------------------------------- 130 (329)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 131 ----------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (329)
T cd05618 131 ----------------SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 194 (329)
T ss_pred ----------------CCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCC
Confidence 2356899999988642 222345678999999999999999999999999999999999999
Q ss_pred ccc
Q psy2006 313 LMA 315 (351)
Q Consensus 313 pf~ 315 (351)
||.
T Consensus 195 Pf~ 197 (329)
T cd05618 195 PFD 197 (329)
T ss_pred CCc
Confidence 995
No 88
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.2e-33 Score=260.69 Aligned_cols=198 Identities=18% Similarity=0.280 Sum_probs=164.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+||+||+|.+..+++.||+|++.+.. ...+....|..++..+.+ ++ +|+.+++.|...+++|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~----~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGK-PP----FLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-CC----eEeeEEEEEecCCEEEEE
Confidence 367999999999999999999999999997532 222345678888887753 22 299999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.| |+|||++|++|||+|+.|+.+
T Consensus 80 ~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivHrDlkp~Nill 134 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIG-----------------------LFFLHSKGIIYRDLKLDNVML 134 (323)
T ss_pred EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEecCCCHHHeEE
Confidence 9999 899999987764 57788888888888887 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 135 ~------------------------------------------------------------------------------- 135 (323)
T cd05616 135 D------------------------------------------------------------------------------- 135 (323)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....+||+|||++... ........||+.|+|||++.+..++.++|+||+||++|+|+||..
T Consensus 136 ----------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 199 (323)
T cd05616 136 ----------------SEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199 (323)
T ss_pred ----------------CCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCC
Confidence 2356899999988642 222345678999999999999999999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 200 Pf~~~~~~~~~ 210 (323)
T cd05616 200 PFEGEDEDELF 210 (323)
T ss_pred CCCCCCHHHHH
Confidence 99887765543
No 89
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.4e-33 Score=261.49 Aligned_cols=198 Identities=21% Similarity=0.281 Sum_probs=164.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||+|+||+||++++..+++.||+|++.+.. .....+..|+.++..+.|++ |+++++.|...+++|+|
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQW------ITTLHYAFQDENNLYLV 79 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCC------EeeEEEEEecCCEEEEE
Confidence 367999999999999999999999999996532 22334677899999988777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.+.. ..+++..++.++.|++.+ |+|||+.+++|||+|+.|+.+
T Consensus 80 ~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~a-----------------------l~~lH~~~iiHrDlkp~Nili 135 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIA-----------------------IDSVHQLHYVHRDIKPDNILM 135 (332)
T ss_pred EeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeEecCCCHHHEEE
Confidence 9999 999999998753 357888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (332)
T cd05623 136 D------------------------------------------------------------------------------- 136 (332)
T ss_pred C-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeec-----CCCCCccceeeeeeeeEe
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||++..... ......||+.|+|||++.+ ..++.++|+|||||++|+
T Consensus 137 ----------------~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~e 200 (332)
T cd05623 137 ----------------MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYE 200 (332)
T ss_pred ----------------CCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHH
Confidence 234689999998864211 1123578999999998862 457889999999999999
Q ss_pred eccccccccccCCCcee
Q psy2006 307 LYLGITLMARKTKTKYF 323 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~ 323 (351)
|++|..||...+..+.+
T Consensus 201 ll~g~~Pf~~~~~~~~~ 217 (332)
T cd05623 201 MLYGETPFYAESLVETY 217 (332)
T ss_pred HhcCCCCCCCCCHHHHH
Confidence 99999999887655544
No 90
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-33 Score=266.85 Aligned_cols=187 Identities=17% Similarity=0.274 Sum_probs=161.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||+|+||.||+|.+..+++.||+|+... ..+.+|+++|+.|+|+| |++++++|....+.|+|||++
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~Hpn------Iv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPS------IIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCC------CCCEeEEEEECCeeEEEEecC
Confidence 3679999999999999999999999998653 45678999999999888 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.... .+++..++.++.|++.| |+|||++||+|||+||.||.+.
T Consensus 166 ~~~L~~~l~~~~--~l~~~~~~~i~~qi~~a-----------------------L~ylH~~~IvHrDiKP~NIll~---- 216 (391)
T PHA03212 166 KTDLYCYLAAKR--NIAICDILAIERSVLRA-----------------------IQYLHENRIIHRDIKAENIFIN---- 216 (391)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCChHhEEEc----
Confidence 999999987764 57788888888888888 9999999999999999999886
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 217 -------------------------------------------------------------------------------- 216 (391)
T PHA03212 217 -------------------------------------------------------------------------------- 216 (391)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceec----cccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDD----EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+.++|+|||++.... .......||+.|+|||++.+..++.++|+||+||++|++++|..||..
T Consensus 217 -----------~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 217 -----------HPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred -----------CCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 23468999999986422 122346799999999999988999999999999999999999988765
Q ss_pred cC
Q psy2006 317 KT 318 (351)
Q Consensus 317 ~~ 318 (351)
.+
T Consensus 286 ~~ 287 (391)
T PHA03212 286 KD 287 (391)
T ss_pred cc
Confidence 43
No 91
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.6e-33 Score=260.53 Aligned_cols=197 Identities=20% Similarity=0.263 Sum_probs=163.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+||+||++.+..+++.||+|++.+.. ...+.+..|+.+++.+.|++ |++++++|..++++|+|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW------ITNLHYAFQDENNLYLV 79 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC------CCceEEEEecCCeEEEE
Confidence 367999999999999999999999999997522 23345678999999998777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.+.. ..+++..++.++.|++.| |+|||+++++|||+|+.|+.+
T Consensus 80 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~Nill 135 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLA-----------------------IDSVHQLGYVHRDIKPDNVLL 135 (331)
T ss_pred EecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEECCCCHHHEEE
Confidence 9999 999999997643 357888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (331)
T cd05597 136 D------------------------------------------------------------------------------- 136 (331)
T ss_pred C-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeec-----CCCCCccceeeeeeeeEe
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~ 306 (351)
..+.++|+|||++..... ......||+.|+|||++.. ..++.++|+||+||++|+
T Consensus 137 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~e 200 (331)
T cd05597 137 ----------------KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYE 200 (331)
T ss_pred ----------------CCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHH
Confidence 235689999998864321 1122468999999999863 346789999999999999
Q ss_pred eccccccccccCCCce
Q psy2006 307 LYLGITLMARKTKTKY 322 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~ 322 (351)
|++|..||.+.+..+.
T Consensus 201 l~~g~~Pf~~~~~~~~ 216 (331)
T cd05597 201 MLYGETPFYAESLVET 216 (331)
T ss_pred HhhCCCCCCCCCHHHH
Confidence 9999999987654443
No 92
>KOG0577|consensus
Probab=100.00 E-value=6.9e-34 Score=267.24 Aligned_cols=199 Identities=20% Similarity=0.245 Sum_probs=174.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
|+.||+|+||.||-|+|..+.+.||||.+.-+ ...-..+..|++.|++|.|+| +|.+.+.|-.....|||
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPn------tieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPN------TIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCC------cccccceeeccchHHHH
Confidence 46899999999999999999999999999642 233457889999999999988 99999999999999999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||||-||..|++.-.+ .++.+-.+..|..+.+.| |.|||+.+.+|||+|.+||.|+
T Consensus 105 MEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~g-----------------------LaYLHS~~~IHRDiKAGNILLs 160 (948)
T KOG0577|consen 105 MEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQG-----------------------LAYLHSHNRIHRDIKAGNILLS 160 (948)
T ss_pred HHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHH-----------------------HHHHHHhhHHhhhccccceEec
Confidence 9999888888887664 467777777777777777 9999999999999999999999
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
|
T Consensus 161 e------------------------------------------------------------------------------- 161 (948)
T KOG0577|consen 161 E------------------------------------------------------------------------------- 161 (948)
T ss_pred C-------------------------------------------------------------------------------
Confidence 4
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec---CCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
.+.|||+|||.+.. ..+.++++|||.|||||+|+. +.|..++||||||++..+++-.++|
T Consensus 162 ----------------~g~VKLaDFGSAsi-~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPP 224 (948)
T KOG0577|consen 162 ----------------PGLVKLADFGSASI-MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 224 (948)
T ss_pred ----------------CCeeeeccccchhh-cCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCC
Confidence 45799999999864 446789999999999999984 5689999999999999999999999
Q ss_pred ccccCCCceeee
Q psy2006 314 MARKTKTKYFYH 325 (351)
Q Consensus 314 f~~~~~~~~~~~ 325 (351)
+-..+.+..+|+
T Consensus 225 lFnMNAMSALYH 236 (948)
T KOG0577|consen 225 LFNMNAMSALYH 236 (948)
T ss_pred ccCchHHHHHHH
Confidence 998888877663
No 93
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.98 E-value=5e-33 Score=258.86 Aligned_cols=196 Identities=17% Similarity=0.282 Sum_probs=164.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||+||+|.+..+++.||+|++.+.. ........|+.+++.+. |++ |++++++|...+++|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~------i~~~~~~~~~~~~~~lv 74 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPF------LTQLHSCFQTKDRLFFV 74 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCC------ccceeeEEEcCCEEEEE
Confidence 57999999999999999999999999998542 23345667889998874 555 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.| |.|||+++++|||+|+.|+.+
T Consensus 75 ~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~LH~~~ivH~dlkp~Nill 129 (318)
T cd05570 75 MEYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLG-----------------------LQFLHERGIIYRDLKLDNVLL 129 (318)
T ss_pred EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEccCCCHHHeEE
Confidence 9999 899999987764 57888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 130 ~------------------------------------------------------------------------------- 130 (318)
T cd05570 130 D------------------------------------------------------------------------------- 130 (318)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++... .......+|++.|+|||++.+..++.++|+||+||++|++++|..
T Consensus 131 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~ 194 (318)
T cd05570 131 ----------------SEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQS 194 (318)
T ss_pred ----------------CCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCC
Confidence 2356899999987542 222234578999999999999999999999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||.+.+..+.+
T Consensus 195 pf~~~~~~~~~ 205 (318)
T cd05570 195 PFEGDDEDELF 205 (318)
T ss_pred CCCCCCHHHHH
Confidence 99877655443
No 94
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.98 E-value=4.1e-33 Score=260.03 Aligned_cols=195 Identities=18% Similarity=0.298 Sum_probs=161.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHH---hCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQK---IGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~---l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++.||+|+||.||+|.+..+++.||||++++.. ...+.+.+|++++.. ++|+| |++++++|...+++
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~------i~~~~~~~~~~~~~ 77 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF------LVNLFACFQTEDHV 77 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCC------hhceeeEEEcCCEE
Confidence 367999999999999999999999999997532 223456677776654 45555 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
|+||||+ +++|...+... .+++..+..++.|++.| |+|||+.|++|||+|+.|
T Consensus 78 ~lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivHrdlkp~N 131 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLG-----------------------LQYLHENKIVYRDLKLDN 131 (324)
T ss_pred EEEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeEecCCCHHH
Confidence 9999999 88999887653 47788888888888877 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 132 ill~---------------------------------------------------------------------------- 135 (324)
T cd05589 132 LLLD---------------------------------------------------------------------------- 135 (324)
T ss_pred eEEC----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCccee---ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
..+.+||+|||++... ........|++.|+|||.+.+..++.++|+|||||++|+|++
T Consensus 136 -------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 196 (324)
T cd05589 136 -------------------TEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196 (324)
T ss_pred -------------------CCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh
Confidence 2356899999987642 222345678999999999998889999999999999999999
Q ss_pred ccccccccCCCce
Q psy2006 310 GITLMARKTKTKY 322 (351)
Q Consensus 310 G~~pf~~~~~~~~ 322 (351)
|..||.+.+..+.
T Consensus 197 G~~pf~~~~~~~~ 209 (324)
T cd05589 197 GESPFPGDDEEEV 209 (324)
T ss_pred CCCCCCCCCHHHH
Confidence 9999988765544
No 95
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.98 E-value=5.3e-33 Score=259.28 Aligned_cols=196 Identities=16% Similarity=0.235 Sum_probs=163.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||+||+|.+..+++.||+|++.+.. ...+....|..++..+.|.+ +|+++++.|...+.+|+||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-----~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP-----FLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC-----chhheeeEEecCCEEEEEE
Confidence 57999999999999999999999999997542 22345667888888886432 2889999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|++|+.+.
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~a-----------------------l~~lH~~~ivHrDikp~Nill~ 135 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVG-----------------------LFFLHRRGIIYRDLKLDNVMLD 135 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHHHeEEC
Confidence 999 899999987764 57888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (323)
T cd05615 136 -------------------------------------------------------------------------------- 135 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.++|+|||++.... .......||+.|+|||++.+..++.++|+||+||++|+|++|..|
T Consensus 136 ---------------~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p 200 (323)
T cd05615 136 ---------------SEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 200 (323)
T ss_pred ---------------CCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCC
Confidence 23568999999876421 122345689999999999888899999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|.+.+..+.
T Consensus 201 f~~~~~~~~ 209 (323)
T cd05615 201 FDGEDEDEL 209 (323)
T ss_pred CCCCCHHHH
Confidence 988765543
No 96
>KOG0612|consensus
Probab=99.98 E-value=1.9e-34 Score=287.76 Aligned_cols=216 Identities=21% Similarity=0.280 Sum_probs=176.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.|.+++.+.+++.||+|++++. ......+..|-.+|..-.+. +|++|.-+|.+++++|+||
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~------Wiv~LhyAFQD~~~LYlVM 154 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE------WIVQLHYAFQDERYLYLVM 154 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH------HHHHHHHHhcCccceEEEE
Confidence 5699999999999999999999999999873 23455677888999765433 4999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ ||||..+|..+. ++|++-|+ +|..+++.||+-+|+.|.+|||+||+|+.|.
T Consensus 155 dY~pGGDlltLlSk~~--~~pE~~Ar-----------------------FY~aEiVlAldslH~mgyVHRDiKPDNvLld 209 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLSKFD--RLPEDWAR-----------------------FYTAEIVLALDSLHSMGYVHRDIKPDNVLLD 209 (1317)
T ss_pred ecccCchHHHHHhhcC--CChHHHHH-----------------------HHHHHHHHHHHHHHhccceeccCCcceeEec
Confidence 999 999999998876 45555444 5555555559999999999999999999887
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 210 -------------------------------------------------------------------------------- 209 (1317)
T KOG0612|consen 210 -------------------------------------------------------------------------------- 209 (1317)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec--c--ccccccccceeeCceeeec-----CCCCCccceeeeeeeeEee
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD--E--HHSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--~--~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~l 307 (351)
..+++||+|||.|-... . ..+..+|||-|.+||++.. +.|+...|+||+|+++|||
T Consensus 210 ---------------~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEM 274 (1317)
T KOG0612|consen 210 ---------------KSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEM 274 (1317)
T ss_pred ---------------ccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHH
Confidence 45789999999986532 2 2356899999999999873 3578999999999999999
Q ss_pred ccccccccccCCCceee-----ecccCCcccccccccccccCccC
Q psy2006 308 YLGITLMARKTKTKYFY-----HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
+.|.+||+.++-.++|- ..-+.|+ ... .||++||+|
T Consensus 275 lyG~TPFYadslveTY~KIm~hk~~l~FP--~~~--~VSeeakdL 315 (1317)
T KOG0612|consen 275 LYGETPFYADSLVETYGKIMNHKESLSFP--DET--DVSEEAKDL 315 (1317)
T ss_pred HcCCCcchHHHHHHHHHHHhchhhhcCCC--ccc--ccCHHHHHH
Confidence 99999999998777773 2344555 333 499999987
No 97
>KOG4279|consensus
Probab=99.98 E-value=4.4e-33 Score=265.78 Aligned_cols=220 Identities=19% Similarity=0.272 Sum_probs=178.4
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
.||.|.||+||-|+|+.+....|||-+... ..+.+....||++.++|+|.| ||++++.+..++++-|.||-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkN------IVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKN------IVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHh------HHHHhhccCCCCeEEEEeecCC
Confidence 389999999999999999999999999643 345567888999999999988 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
||||.++++.... ++ .-.+..+.+|.+|++.||.|||+..|+|||||-+|+.+-.
T Consensus 656 GGSLSsLLrskWG-Pl---------------------KDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--- 710 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG-PL---------------------KDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--- 710 (1226)
T ss_pred CCcHHHHHHhccC-CC---------------------ccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee---
Confidence 9999999998852 32 1256667777777777799999999999999999998762
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 711 -------------------------------------------------------------------------------- 710 (1226)
T KOG4279|consen 711 -------------------------------------------------------------------------------- 710 (1226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecC--CCCCccceeeeeeeeEeecccccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
=.+.+||+|||.++. .+....++.||..|||||++-++ +|+.++|||||||++.||+||++||.
T Consensus 711 -----------ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 711 -----------YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred -----------ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence 136799999998875 23344678999999999999864 68999999999999999999999997
Q ss_pred ccCCCce-eee-cccCCcccccccccccccCcc
Q psy2006 316 RKTKTKY-FYH-GKLDWDEKGTAGRYVRENCKP 346 (351)
Q Consensus 316 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 346 (351)
....-.. ++. | -+.-+++....+|++||.
T Consensus 780 ElgspqAAMFkVG--myKvHP~iPeelsaeak~ 810 (1226)
T KOG4279|consen 780 ELGSPQAAMFKVG--MYKVHPPIPEELSAEAKN 810 (1226)
T ss_pred ecCChhHhhhhhc--ceecCCCCcHHHHHHHHH
Confidence 6543222 211 1 144556666677777664
No 98
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.98 E-value=1.4e-32 Score=251.72 Aligned_cols=195 Identities=19% Similarity=0.275 Sum_probs=165.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||+||++.+..+++.||+|++.... .....+.+|+.+++.++|++ |+++++.+..++++|+||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF------VVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCC------EeeeeeeecCCCeEEEEE
Confidence 67999999999999998899999999997532 11234568999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.......+++..+..++.|++.| +.|||+.+++|+|+++.|+.+.
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~Nil~~ 136 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG-----------------------LEDLHRERIVYRDLKPENILLD 136 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcEecCCCHHHEEEC
Confidence 999 8999998876654568888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 137 ~------------------------------------------------------------------------------- 137 (285)
T cd05605 137 D------------------------------------------------------------------------------- 137 (285)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||++..... ......|++.|+|||.+.+..++.++|+||+||++|++++|..||
T Consensus 138 ----------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf 201 (285)
T cd05605 138 ----------------YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPF 201 (285)
T ss_pred ----------------CCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCC
Confidence 34689999998865322 223457889999999998888999999999999999999999999
Q ss_pred cccCCC
Q psy2006 315 ARKTKT 320 (351)
Q Consensus 315 ~~~~~~ 320 (351)
.+.+..
T Consensus 202 ~~~~~~ 207 (285)
T cd05605 202 RQRKEK 207 (285)
T ss_pred CCCchh
Confidence 876543
No 99
>KOG4250|consensus
Probab=99.98 E-value=2.4e-33 Score=269.24 Aligned_cols=199 Identities=21% Similarity=0.207 Sum_probs=168.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------eE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------HM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~~ 73 (351)
+.||.||||.||+|+++++|+.||||.++.. ...++..-+|+++|++|+|+| ||+++|+=+... .-
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~N------IVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPN------IVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchh------hhhhcccCCccccCcccccc
Confidence 4699999999999999999999999999763 344567788999999999888 999998876543 78
Q ss_pred EEEEecc-CCCHHHHHHhc-CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKEN-NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~-~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.+||||| ||||+..|.+- +..++|+..+..+...+..| +.|||+.||+|||+||+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~a-----------------------l~~LrEn~IvHRDlKP~ 149 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSA-----------------------LRHLRENGIVHRDLKPG 149 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHH-----------------------HHHHHHcCceeccCCCC
Confidence 9999999 99999999876 44578888888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
||.+-+ |.
T Consensus 150 NIvl~~---------------Ge--------------------------------------------------------- 157 (732)
T KOG4250|consen 150 NIVLQI---------------GE--------------------------------------------------------- 157 (732)
T ss_pred cEEEee---------------cC---------------------------------------------------------
Confidence 998762 00
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeee-cCCCCCccceeeeeeeeEeec
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~~l~ 308 (351)
+....-||+|||.++-. +....+.+||+.|.+||+.. +..|+..+|.||+||++|+.+
T Consensus 158 -------------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca 218 (732)
T KOG4250|consen 158 -------------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA 218 (732)
T ss_pred -------------------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence 01234699999999763 44567899999999999998 478899999999999999999
Q ss_pred cccccccccCCC
Q psy2006 309 LGITLMARKTKT 320 (351)
Q Consensus 309 tG~~pf~~~~~~ 320 (351)
||..||-+.-..
T Consensus 219 TG~lPF~p~~~p 230 (732)
T KOG4250|consen 219 TGELPFIPFGGP 230 (732)
T ss_pred ccCCCCCcCCCc
Confidence 999999665433
No 100
>KOG4721|consensus
Probab=99.98 E-value=3.6e-33 Score=261.47 Aligned_cols=190 Identities=18% Similarity=0.272 Sum_probs=166.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
|+=||.|+.|.||+|+ ..++.||||+++. --..+|+-|++|+|+| ||...++++....+|||||||
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~e------lkETdIKHLRkLkH~N------II~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRE------LKETDIKHLRKLKHPN------IITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhh------hhhhhHHHHHhccCcc------eeeEeeeecCCceeEEeeecc
Confidence 3558999999999999 6799999999963 2245899999999988 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
.|.|...++... .+.......+..+|+.| ++|||.+.|+|||+|.-||.|+
T Consensus 195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~G-----------------------M~YLH~hKIIHRDLKSPNiLIs--- 246 (904)
T KOG4721|consen 195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGG-----------------------MNYLHLHKIIHRDLKSPNILIS--- 246 (904)
T ss_pred ccccHHHHHhccC--ccCHHHHHHHHHHhhhh-----------------------hHHHHHhhHhhhccCCCceEee---
Confidence 999999999876 45666677777777777 9999999999999999999887
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 247 -------------------------------------------------------------------------------- 246 (904)
T KOG4721|consen 247 -------------------------------------------------------------------------------- 246 (904)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceec--cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
-...|||+|||.+.... ....+++||..|||||+|...+++.|+|||||||+||||+||..||..-
T Consensus 247 ------------~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 247 ------------YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred ------------ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc
Confidence 23579999999886533 3556799999999999999999999999999999999999999999998
Q ss_pred CCCceee
Q psy2006 318 TKTKYFY 324 (351)
Q Consensus 318 ~~~~~~~ 324 (351)
+.+-+++
T Consensus 315 dssAIIw 321 (904)
T KOG4721|consen 315 DSSAIIW 321 (904)
T ss_pred chheeEE
Confidence 8887764
No 101
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.98 E-value=7.7e-33 Score=253.25 Aligned_cols=195 Identities=26% Similarity=0.413 Sum_probs=163.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|+||+||+|+++.+++.||+|++.... ...+.+.+|+.+++.++|+| |++++++|..+++.|+|||
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN------IVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCcc------ccchhhhEecCCEEEEEEe
Confidence 57999999999999999999999999997532 23456778999999999887 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|+.+++.+.+.... ..+++..++.++.|++.| |.|||+.+++|||+|+.|+.+.
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~i~H~dlkp~Nill~-- 134 (287)
T cd07848 81 YVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKA-----------------------IHWCHKNDIVHRDIKPENLLIS-- 134 (287)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEEc--
Confidence 99555555555443 357888888888888888 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (287)
T cd07848 135 -------------------------------------------------------------------------------- 134 (287)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....+||+|||++..... ......|++.|+|||.+.+..++.++|+||+||++|++++|.+||
T Consensus 135 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf 201 (287)
T cd07848 135 -------------HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLF 201 (287)
T ss_pred -------------CCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCC
Confidence 234689999998865322 223457899999999998888999999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
.+.+..+
T Consensus 202 ~~~~~~~ 208 (287)
T cd07848 202 PGESEID 208 (287)
T ss_pred CCCCHHH
Confidence 8766443
No 102
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=3.4e-32 Score=254.55 Aligned_cols=192 Identities=25% Similarity=0.326 Sum_probs=159.3
Q ss_pred CccccCcccceEEEEEEe---ecCcEEEEEEecchh-----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCC
Q psy2006 1 MCSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE-----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
+++||+|+||+||++.+. .+++.||+|++.+.. ...+....|+++++.+. |++ |+.++++|..++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~------i~~~~~~~~~~~ 78 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPF------LVTLHYAFQTEA 78 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCC------cccEEEEEecCC
Confidence 367999999999999864 478999999997532 22345678999999995 455 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
.+++||||+ +++|.+++.... .+++..++.++.|++.| |+|||++|++|||+|+
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivHrDlkp 133 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILA-----------------------LEHLHKLGIVYRDIKL 133 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcEecCCCH
Confidence 999999999 899999997754 57888888888888888 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.||.+.
T Consensus 134 ~Nili~-------------------------------------------------------------------------- 139 (332)
T cd05614 134 ENILLD-------------------------------------------------------------------------- 139 (332)
T ss_pred HHeEEC--------------------------------------------------------------------------
Confidence 999876
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceec----cccccccccceeeCceeeecC-CCCCccceeeeeeeeE
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD----EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIF 305 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~ 305 (351)
..+.++|+|||++.... .......||+.|+|||.+.+. .++.++|+|||||++|
T Consensus 140 ---------------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 198 (332)
T cd05614 140 ---------------------SEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIF 198 (332)
T ss_pred ---------------------CCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhh
Confidence 23468999999886421 122346789999999999765 4788999999999999
Q ss_pred eeccccccccccC
Q psy2006 306 ELYLGITLMARKT 318 (351)
Q Consensus 306 ~l~tG~~pf~~~~ 318 (351)
+|+||..||....
T Consensus 199 elltg~~pf~~~~ 211 (332)
T cd05614 199 ELLTGASPFTLEG 211 (332)
T ss_pred hhhcCCCCCCCCC
Confidence 9999999997543
No 103
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=2.4e-32 Score=249.59 Aligned_cols=191 Identities=15% Similarity=0.196 Sum_probs=160.8
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||+|+||+||+|.+..+++.||+|++..... ..+.+..|+++++.+.|++ |+++.++|....+.|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~------i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRF------IVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCc------EeeeeEEEcCCCeEEEEEeC
Confidence 7999999999999999999999999975321 2245678999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 80 L-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 80 ~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
+ +++|.+++... ....+++..+..++.|++.| |+|||+++++|||+|+.|+.+.
T Consensus 75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dlkp~Nili~ 131 (280)
T cd05608 75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG-----------------------LEHLHQRRIIYRDLKPENVLLD 131 (280)
T ss_pred CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEEEC
Confidence 9 89999887543 22357788888888888888 9999999999999999999875
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 132 -------------------------------------------------------------------------------- 131 (280)
T cd05608 132 -------------------------------------------------------------------------------- 131 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||++..... ......||+.|+|||.+.+..++.++|+||+||++|++++|..|
T Consensus 132 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 196 (280)
T cd05608 132 ---------------NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGP 196 (280)
T ss_pred ---------------CCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 234689999998864322 12335789999999999999999999999999999999999999
Q ss_pred ccccC
Q psy2006 314 MARKT 318 (351)
Q Consensus 314 f~~~~ 318 (351)
|...+
T Consensus 197 f~~~~ 201 (280)
T cd05608 197 FRARG 201 (280)
T ss_pred CCCCC
Confidence 97654
No 104
>KOG0690|consensus
Probab=99.98 E-value=1.2e-33 Score=249.22 Aligned_cols=206 Identities=20% Similarity=0.298 Sum_probs=176.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
|+.||.|.||.|-+++.+.+++.||||++++. .+...+...|-++|+..+|+. +..|.-.|..++++|+|
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPF------Lt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPF------LTSLKYSFQTQDRLCFV 246 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcH------HHHhhhhhccCceEEEE
Confidence 46799999999999999999999999999874 344456678999999999888 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ ||.|+-.+.+.. .++++.++-+...|..| |.|||+++|+.||+|..|++|
T Consensus 247 MeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsA-----------------------L~YLHs~~ivYRDlKLENLlL 301 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSA-----------------------LGYLHSRNIVYRDLKLENLLL 301 (516)
T ss_pred EEEccCceEeeehhhhh--cccchhhhhhhHHHHHH-----------------------hhhhhhCCeeeeechhhhhee
Confidence 9999 999998888865 45555555555555554 999999999999999999887
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 302 D------------------------------------------------------------------------------- 302 (516)
T KOG0690|consen 302 D------------------------------------------------------------------------------- 302 (516)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|||+|.- ......+.||||.|+|||++....|+.++|+|.+|+++|||.+|+.
T Consensus 303 ----------------kDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL 366 (516)
T KOG0690|consen 303 ----------------KDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL 366 (516)
T ss_pred ----------------cCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccC
Confidence 357899999999974 3445678999999999999999999999999999999999999999
Q ss_pred cccccCCCceee---ecccCCcc
Q psy2006 313 LMARKTKTKYFY---HGKLDWDE 332 (351)
Q Consensus 313 pf~~~~~~~~~~---~~~~~~~~ 332 (351)
||+..+.+++|. -+++.|+.
T Consensus 367 PFyn~dh~kLFeLIl~ed~kFPr 389 (516)
T KOG0690|consen 367 PFYNKDHEKLFELILMEDLKFPR 389 (516)
T ss_pred cccccchhHHHHHHHhhhccCCc
Confidence 999999998874 35555543
No 105
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=1.5e-32 Score=257.19 Aligned_cols=192 Identities=24% Similarity=0.378 Sum_probs=159.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~ 73 (351)
++||+|+||.||+|++..+++.||||++... ......+.+|+++++.++|+| |+++++++.... ++
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD------IVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCC------EeeecceEeccCCCCCceE
Confidence 6799999999999999999999999998642 122345778999999999888 999999886443 68
Q ss_pred EEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 74 CIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|+||||++++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|+.|+
T Consensus 80 ~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivH~dlkp~NI 134 (338)
T cd07859 80 YVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRA-----------------------LKYIHTANVFHRDLKPKNI 134 (338)
T ss_pred EEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHe
Confidence 9999999999999987754 57777888888888777 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 135 ll~----------------------------------------------------------------------------- 137 (338)
T cd07859 135 LAN----------------------------------------------------------------------------- 137 (338)
T ss_pred EEC-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeec--CCCCCccceeeeeeeeE
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~ 305 (351)
..+.+||+|||++..... ......||+.|+|||++.+ ..++.++|+||+||++|
T Consensus 138 ------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~ 199 (338)
T cd07859 138 ------------------ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA 199 (338)
T ss_pred ------------------CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHH
Confidence 235689999999864211 1134578999999999865 57789999999999999
Q ss_pred eeccccccccccCC
Q psy2006 306 ELYLGITLMARKTK 319 (351)
Q Consensus 306 ~l~tG~~pf~~~~~ 319 (351)
+|++|.+||.+.+.
T Consensus 200 el~tg~~pf~~~~~ 213 (338)
T cd07859 200 EVLTGKPLFPGKNV 213 (338)
T ss_pred HHHcCCCCCCCCCh
Confidence 99999999987653
No 106
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=5.1e-32 Score=247.06 Aligned_cols=191 Identities=22% Similarity=0.296 Sum_probs=162.1
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||.|+||+||++.++.+++.||+|.+.... ........|+++++.++|++ |+++.+.|..+.++|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~------i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPF------IVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCc------EEEEEEEEecCCeEEEEEec
Confidence 799999999999999999999999997532 12234567999999999887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ |++|.+++.......+++..+..++.|++.| |+|||+.|++|||+|+.|+.+.+
T Consensus 75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivH~dikp~Nili~~- 130 (277)
T cd05607 75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCG-----------------------ILHLHSMDIVYRDMKPENVLLDD- 130 (277)
T ss_pred CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEEccCChHhEEEcC-
Confidence 9 8999999877655567777788888888887 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 131 -------------------------------------------------------------------------------- 130 (277)
T cd05607 131 -------------------------------------------------------------------------------- 130 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||++..... ......|++.|+|||.+.+..++.++|+||+||++|++++|..||..
T Consensus 131 --------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 131 --------------QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred --------------CCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 34689999998765322 22345688999999999888899999999999999999999999976
Q ss_pred cC
Q psy2006 317 KT 318 (351)
Q Consensus 317 ~~ 318 (351)
..
T Consensus 197 ~~ 198 (277)
T cd05607 197 HK 198 (277)
T ss_pred Cc
Confidence 43
No 107
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=2.7e-32 Score=253.41 Aligned_cols=197 Identities=21% Similarity=0.356 Sum_probs=157.9
Q ss_pred ccccCcccceEEEEEEe--ecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee--CCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVY--EVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY--HGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~--~~~~~lV~ 77 (351)
++||+|+||+||+|+++ .+++.||+|++.... ....+.+|+++|++++|+| |++++++|.. +.++|+||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPN------VISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCC------CcceeeeEecCCCcEEEEEE
Confidence 58999999999999965 467899999997532 2345678999999999888 9999999964 45899999
Q ss_pred eccCCCHHHHHHhcC-------CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 78 EILGLSVFDFLKENN-------YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 78 E~~g~sL~~~l~~~~-------~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
||++++|.+++.... ...+++..++.++.|++.| |+|||++|++|||+|+
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a-----------------------l~~LH~~~ivHrDlkp 136 (317)
T cd07868 80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG-----------------------IHYLHANWVLHRDLKP 136 (317)
T ss_pred eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEcCCCCH
Confidence 999999999886432 1246666777777777776 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+-+
T Consensus 137 ~Nil~~~~~----------------------------------------------------------------------- 145 (317)
T cd07868 137 ANILVMGEG----------------------------------------------------------------------- 145 (317)
T ss_pred HHEEEecCC-----------------------------------------------------------------------
Confidence 999885100
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecC-CCCCccceeeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCI 303 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~ 303 (351)
.....+||+|||++..... ......||+.|+|||++.+. .++.++|+||+||+
T Consensus 146 --------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 205 (317)
T cd07868 146 --------------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 205 (317)
T ss_pred --------------------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHH
Confidence 0235699999999865322 22346789999999999874 57899999999999
Q ss_pred eEeeccccccccccCC
Q psy2006 304 IFELYLGITLMARKTK 319 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~ 319 (351)
+|+|++|.+||.+...
T Consensus 206 l~el~~g~~~f~~~~~ 221 (317)
T cd07868 206 FAELLTSEPIFHCRQE 221 (317)
T ss_pred HHHHHhCCCCccCCcc
Confidence 9999999999976543
No 108
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.6e-32 Score=254.48 Aligned_cols=195 Identities=23% Similarity=0.302 Sum_probs=166.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||+|+||.||++++..++..||+|++... ....+.+.+|+++|+.++|+| |+++++++..++.+++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY------IVGFYGAFYSDGEISICME 83 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCC------CCeEEEEEEECCEEEEEee
Confidence 35799999999999999999999999999753 234467889999999999887 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCeEEe
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDIRLI 156 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni~l~ 156 (351)
|+ +++|.+++.... .+++..+..++.|++.+ |.|||++ +++|||+|+.|+.+.
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~~ivH~dlkp~Nil~~ 138 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRG-----------------------LAYLREKHQIMHRDVKPSNILVN 138 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHhhcCCEEcCCCChhhEEEc
Confidence 99 889999998764 57788888888888887 9999986 599999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (331)
T cd06649 139 -------------------------------------------------------------------------------- 138 (331)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCccee-ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++|+|||++... ........|++.|+|||.+.+..++.++|+||+||++|++++|+.||.
T Consensus 139 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 139 ---------------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred ---------------CCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 2346899999988653 223345678999999999998889999999999999999999999997
Q ss_pred ccCCCc
Q psy2006 316 RKTKTK 321 (351)
Q Consensus 316 ~~~~~~ 321 (351)
..+..+
T Consensus 204 ~~~~~~ 209 (331)
T cd06649 204 PPDAKE 209 (331)
T ss_pred CCCHHH
Confidence 655433
No 109
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=1.4e-32 Score=266.68 Aligned_cols=195 Identities=22% Similarity=0.356 Sum_probs=159.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--------CeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--------GHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--------~~~ 73 (351)
+.||+|+||+||+|++..+++.||||++.... ....+|+.+|+.++|+| |++++++|... ..+
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~n------iv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHIN------IIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCC------CcceeeeEeecccccCCCceEE
Confidence 57999999999999998899999999986532 23457999999999888 99999987543 268
Q ss_pred EEEEeccCCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 74 CIAFEILGLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
++||||++++|.+++... ....+++..++.++.|++.| |+|||+++++|||+|+.
T Consensus 143 ~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~g-----------------------L~yLH~~~IiHrDLKp~ 199 (440)
T PTZ00036 143 NVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRA-----------------------LAYIHSKFICHRDLKPQ 199 (440)
T ss_pred EEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEecCCcCHH
Confidence 899999988998888653 23457777788888888777 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+..
T Consensus 200 NILl~~-------------------------------------------------------------------------- 205 (440)
T PTZ00036 200 NLLIDP-------------------------------------------------------------------------- 205 (440)
T ss_pred HEEEcC--------------------------------------------------------------------------
Confidence 998751
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceec--cccccccccceeeCceeeecC-CCCCccceeeeeeeeEeec
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~ 308 (351)
....+||+|||++.... .......||+.|+|||++.+. .++.++|+||+||++|+|+
T Consensus 206 --------------------~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell 265 (440)
T PTZ00036 206 --------------------NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI 265 (440)
T ss_pred --------------------CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 12358999999987532 223346789999999998764 6899999999999999999
Q ss_pred cccccccccCCCce
Q psy2006 309 LGITLMARKTKTKY 322 (351)
Q Consensus 309 tG~~pf~~~~~~~~ 322 (351)
+|.+||.+.+..+.
T Consensus 266 tG~~pf~~~~~~~~ 279 (440)
T PTZ00036 266 LGYPIFSGQSSVDQ 279 (440)
T ss_pred hCCCCCCCCChHHH
Confidence 99999998765543
No 110
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=2.6e-32 Score=250.13 Aligned_cols=199 Identities=22% Similarity=0.373 Sum_probs=163.2
Q ss_pred CccccCcccceEEEEEEee-cCcEEEEEEecchh---hhhHHHHHHHHHHHHhC---CCCCCCCcceeeeeeeEee----
Q psy2006 1 MCSLNCVASNHVCTNVVYE-VDSVVALKIIKNVE---KYREAARLEINALQKIG---EKDPNGRHLCVKMLDWFDY---- 69 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~---h~~~~g~~~Iv~l~~~f~~---- 69 (351)
+++||+|+||+||+|++.. +++.||+|++.... .......+|+.+++.+. |+| |+++++++..
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpn------iv~~~~~~~~~~~~ 79 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN------VVRLFDVCTVSRTD 79 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCC------cceEEEEEecccCC
Confidence 3679999999999999854 57899999997532 22345567888888774 555 9999999863
Q ss_pred -CCeEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc
Q psy2006 70 -HGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV 148 (351)
Q Consensus 70 -~~~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~ 148 (351)
...+++||||++++|.+++.......+++..++.++.|++.| |.|||++|++|||+
T Consensus 80 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a-----------------------L~~lH~~~iiH~dl 136 (290)
T cd07862 80 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG-----------------------LDFLHSHRVVHRDL 136 (290)
T ss_pred CCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeCCC
Confidence 347999999998899999987655567888888888888888 99999999999999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
|+.|+.+.
T Consensus 137 kp~Nil~~------------------------------------------------------------------------ 144 (290)
T cd07862 137 KPQNILVT------------------------------------------------------------------------ 144 (290)
T ss_pred CHHHEEEc------------------------------------------------------------------------
Confidence 99999886
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
..+.++|+|||++..... ......||+.|+|||.+.+..++.++|+||+||++|+
T Consensus 145 -----------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e 201 (290)
T cd07862 145 -----------------------SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 201 (290)
T ss_pred -----------------------CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHH
Confidence 235689999999865332 2345678999999999988889999999999999999
Q ss_pred eccccccccccCCCcee
Q psy2006 307 LYLGITLMARKTKTKYF 323 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~ 323 (351)
+++|.+||.+.+..+.+
T Consensus 202 l~~g~~~f~~~~~~~~~ 218 (290)
T cd07862 202 MFRRKPLFRGSSDVDQL 218 (290)
T ss_pred HHcCCCCcCCCCHHHHH
Confidence 99999999987765543
No 111
>KOG0670|consensus
Probab=99.97 E-value=4.8e-32 Score=251.63 Aligned_cols=203 Identities=29% Similarity=0.506 Sum_probs=181.8
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccCCC
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g~s 83 (351)
.|.|-||+|.+|.|+..+..||||+|.+.+.-.+.-+.|+.||++|...++.++.|+++++-.|.-..|+|||||.+..+
T Consensus 440 ~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslN 519 (752)
T KOG0670|consen 440 TGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLN 519 (752)
T ss_pred cccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhch
Confidence 58999999999999999999999999987767778889999999999888889999999999999999999999999999
Q ss_pred HHHHHHhc-CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcc
Q psy2006 84 VFDFLKEN-NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSAT 162 (351)
Q Consensus 84 L~~~l~~~-~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~ 162 (351)
|.++++.. ...++.+..|+.++.||..| |..|-.-||+|-||||.|+.+-
T Consensus 520 LRevLKKyG~nvGL~ikaVRsYaqQLflA-----------------------LklLK~c~vlHaDIKPDNiLVN------ 570 (752)
T KOG0670|consen 520 LREVLKKYGRNVGLHIKAVRSYAQQLFLA-----------------------LKLLKKCGVLHADIKPDNILVN------ 570 (752)
T ss_pred HHHHHHHhCcccceeehHHHHHHHHHHHH-----------------------HHHHHhcCeeecccCccceEec------
Confidence 99999988 45678999999999999998 9999999999999999999876
Q ss_pred cCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhcc
Q psy2006 163 FDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSS 242 (351)
Q Consensus 163 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T Consensus 571 -------------------------------------------------------------------------------- 570 (752)
T KOG0670|consen 571 -------------------------------------------------------------------------------- 570 (752)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhhccccceeeeccCCcceecc-ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCCc
Q psy2006 243 VSSLVMRRVRRCDIRLIDFGSATFDDE-HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 243 ~~~~~~~~~~~~~vkl~dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
.....+||||||.+.+... ..+...-+..|.|||+++|.+|....|+||+||+||||.||+.+|.|.|...
T Consensus 571 --------E~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ 642 (752)
T KOG0670|consen 571 --------ESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ 642 (752)
T ss_pred --------cCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence 1346689999999877443 4444555678999999999999999999999999999999999999999776
Q ss_pred ee
Q psy2006 322 YF 323 (351)
Q Consensus 322 ~~ 323 (351)
-+
T Consensus 643 ML 644 (752)
T KOG0670|consen 643 ML 644 (752)
T ss_pred HH
Confidence 54
No 112
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=5.5e-32 Score=247.64 Aligned_cols=197 Identities=21% Similarity=0.345 Sum_probs=162.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhC---CCCCCCCcceeeeeeeEeeC----
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIG---EKDPNGRHLCVKMLDWFDYH---- 70 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~---h~~~~g~~~Iv~l~~~f~~~---- 70 (351)
+++||+|+||+||+|.++.+++.||+|.+.... .......+|+.+++.+. |+| |+++++++...
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~n------i~~~~~~~~~~~~~~ 78 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPN------IVRLMDVCATSRTDR 78 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCC------eeeeeeeeccccCCC
Confidence 368999999999999999999999999997532 12234567888887774 555 99999998753
Q ss_pred -CeEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 71 -GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 71 -~~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
.++++||||++++|.+++.......+++..++.++.|++.| |.|+|++|++|||+|
T Consensus 79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivH~dik 135 (288)
T cd07863 79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRG-----------------------LDFLHANCIVHRDLK 135 (288)
T ss_pred CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCC
Confidence 37999999998899999987654557888888888888888 999999999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
++|+.+.
T Consensus 136 p~Nili~------------------------------------------------------------------------- 142 (288)
T cd07863 136 PENILVT------------------------------------------------------------------------- 142 (288)
T ss_pred HHHEEEC-------------------------------------------------------------------------
Confidence 9999876
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
....+||+|||++..... ......|++.|+|||++.+..++.++|+||+||++|+|
T Consensus 143 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 200 (288)
T cd07863 143 ----------------------SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 200 (288)
T ss_pred ----------------------CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHH
Confidence 234689999998875432 22345778999999999888899999999999999999
Q ss_pred ccccccccccCCCc
Q psy2006 308 YLGITLMARKTKTK 321 (351)
Q Consensus 308 ~tG~~pf~~~~~~~ 321 (351)
++|.+||.+.+..+
T Consensus 201 ~~g~~~f~~~~~~~ 214 (288)
T cd07863 201 FRRKPLFCGNSEAD 214 (288)
T ss_pred HhCCcCcCCCCHHH
Confidence 99999998766543
No 113
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=1.3e-31 Score=245.52 Aligned_cols=193 Identities=19% Similarity=0.274 Sum_probs=164.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||+||+|.+..+++.||+|.+.... .....+..|+.+++.++|++ |+.+++.+...+++|+||
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~------i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF------VVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCC------eeeeeEEEecCCEEEEEE
Confidence 57999999999999999999999999986532 12234678999999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.......+++..+..++.|++.| |.|||+.+++|+|+|+.|+.+.
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~iiH~dikp~Nil~~ 136 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG-----------------------LEDLHQERIVYRDLKPENILLD 136 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEeCCCCHHHEEEC
Confidence 999 8999999876655568888888888888888 9999999999999999999875
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (285)
T cd05630 137 -------------------------------------------------------------------------------- 136 (285)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......|++.|+|||.+.+..++.++|+||+||++|++++|..||
T Consensus 137 ---------------~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf 201 (285)
T cd05630 137 ---------------DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 201 (285)
T ss_pred ---------------CCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence 134589999998765322 223457899999999999888999999999999999999999999
Q ss_pred cccC
Q psy2006 315 ARKT 318 (351)
Q Consensus 315 ~~~~ 318 (351)
....
T Consensus 202 ~~~~ 205 (285)
T cd05630 202 QQRK 205 (285)
T ss_pred CCCC
Confidence 8654
No 114
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=1.2e-31 Score=245.55 Aligned_cols=194 Identities=20% Similarity=0.284 Sum_probs=166.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||+||+|.+..+++.||+|++.... .....+.+|+++|+.++|++ |+.+.+.|..++..|+||
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~------i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF------VVNLAYAYETKDALCLVL 79 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcC------ceeEEEEEecCCEEEEEE
Confidence 57999999999999999999999999997532 22334678999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++...+...+++..+..++.|++.+ |.|||++|++|||+++.|+.+.
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~-----------------------l~~lH~~~iiH~dikp~Nili~ 136 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG-----------------------LEDLHRENTVYRDLKPENILLD 136 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeecCCCHHHEEEC
Confidence 999 8899999877655578899999999988888 9999999999999999999875
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 137 ~------------------------------------------------------------------------------- 137 (285)
T cd05632 137 D------------------------------------------------------------------------------- 137 (285)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||++..... ......|++.|+|||.+.+..++.++|+||+||++|++++|..||
T Consensus 138 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~ 201 (285)
T cd05632 138 ----------------YGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPF 201 (285)
T ss_pred ----------------CCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 34689999998865322 223457899999999998888999999999999999999999999
Q ss_pred cccCC
Q psy2006 315 ARKTK 319 (351)
Q Consensus 315 ~~~~~ 319 (351)
.....
T Consensus 202 ~~~~~ 206 (285)
T cd05632 202 RGRKE 206 (285)
T ss_pred CCCCH
Confidence 86543
No 115
>KOG1152|consensus
Probab=99.97 E-value=7.9e-32 Score=252.92 Aligned_cols=192 Identities=21% Similarity=0.335 Sum_probs=167.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhh---------hHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY---------REAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYH 70 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---------~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~ 70 (351)
|+++|+||||.||+|++++....|+||.+.+...- -..+..||+||..|. |+|+| |++++|+|+++
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N----IlKlLdfFEdd 641 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN----ILKLLDFFEDD 641 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc----hhhhhheeecC
Confidence 57899999999999999999999999999875321 124567999999997 44444 99999999999
Q ss_pred CeEEEEEecc--CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc
Q psy2006 71 GHMCIAFEIL--GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV 148 (351)
Q Consensus 71 ~~~~lV~E~~--g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~ 148 (351)
+++||+||.. |.+|+++|.... .+.|..++-+++|+..| +.+||++||+|||+
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~ag-----------------------i~hlh~~~ivhrdi 696 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAG-----------------------IKHLHDQGIVHRDI 696 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhc-----------------------cccccccCceeccc
Confidence 9999999999 679999999886 57888888888888888 99999999999999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
|+.|+.+.
T Consensus 697 kdenvivd------------------------------------------------------------------------ 704 (772)
T KOG1152|consen 697 KDENVIVD------------------------------------------------------------------------ 704 (772)
T ss_pred ccccEEEe------------------------------------------------------------------------
Confidence 99999876
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcce-eccccccccccceeeCceeeecCCC-CCccceeeeeeeeEe
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATF-DDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~ 306 (351)
..+-+||+|||.+.. ...+....+||..|.|||++.|.+| +.+.|||++|+++|.
T Consensus 705 -----------------------~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 705 -----------------------SNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred -----------------------cCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 356799999998765 4667788999999999999999998 888999999999999
Q ss_pred eccccccccc
Q psy2006 307 LYLGITLMAR 316 (351)
Q Consensus 307 l~tG~~pf~~ 316 (351)
++..+.||+.
T Consensus 762 ivykenpyyn 771 (772)
T KOG1152|consen 762 IVYKENPYYN 771 (772)
T ss_pred EEeccCCCcC
Confidence 9999999863
No 116
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.2e-31 Score=253.75 Aligned_cols=190 Identities=23% Similarity=0.400 Sum_probs=160.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
++||.|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++|+| |++++++|...+ +
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN------IISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCC------EeeeeeeeccCCCccccce
Confidence 6799999999999999999999999999643 233456778999999999888 999999997554 5
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
+|+||||++++|.+.+.. .+++..++.++.|++.| |.|||++|++|||+|+.|
T Consensus 101 ~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~ivHrDlkp~N 153 (359)
T cd07876 101 VYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCG-----------------------IKHLHSAGIIHRDLKPSN 153 (359)
T ss_pred eEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHH
Confidence 899999998888887643 36777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 154 Il~~---------------------------------------------------------------------------- 157 (359)
T cd07876 154 IVVK---------------------------------------------------------------------------- 157 (359)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9886
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceec--cccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.+||+|||++.... .......||+.|+|||++.+..++.++|+||+||++|+|++|
T Consensus 158 -------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg 218 (359)
T cd07876 158 -------------------SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218 (359)
T ss_pred -------------------CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhC
Confidence 23568999999986532 223446789999999999999999999999999999999999
Q ss_pred cccccccCC
Q psy2006 311 ITLMARKTK 319 (351)
Q Consensus 311 ~~pf~~~~~ 319 (351)
..||.+.+.
T Consensus 219 ~~pf~~~~~ 227 (359)
T cd07876 219 SVIFQGTDH 227 (359)
T ss_pred CCCCCCCCH
Confidence 999987654
No 117
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=4.7e-32 Score=257.69 Aligned_cols=195 Identities=22% Similarity=0.338 Sum_probs=163.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----e
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----H 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~ 72 (351)
+++||+|+||+||+|.+..+++.||+|++... ....+.+.+|+.+++.++|+| |+++++++...+ +
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN------VLSALDILQPPHIDPFEE 78 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCC------cCCHhheecCCCccccce
Confidence 47899999999999999889999999998642 223456788999999999888 999999998877 8
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
+|+||||++++|.+.+.... .+++..++.++.|++.| |.|||++|++|||+|+.|
T Consensus 79 ~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivH~dlkp~N 133 (372)
T cd07853 79 IYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRG-----------------------LKYLHSAGILHRDIKPGN 133 (372)
T ss_pred EEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeCCCCChHH
Confidence 99999999889999886653 57788888888888887 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 134 ili~---------------------------------------------------------------------------- 137 (372)
T cd07853 134 LLVN---------------------------------------------------------------------------- 137 (372)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9886
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecC-CCCCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l 307 (351)
..+.+||+|||++..... ......+++.|+|||.+.+. .++.++|+||+||++++|
T Consensus 138 -------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (372)
T cd07853 138 -------------------SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAEL 198 (372)
T ss_pred -------------------CCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHH
Confidence 235689999998865322 22334678899999998874 468899999999999999
Q ss_pred ccccccccccCCCc
Q psy2006 308 YLGITLMARKTKTK 321 (351)
Q Consensus 308 ~tG~~pf~~~~~~~ 321 (351)
++|..||.+.+..+
T Consensus 199 ~~g~~pf~~~~~~~ 212 (372)
T cd07853 199 LGRRILFQAQSPIQ 212 (372)
T ss_pred HcCCCCCCCCCHHH
Confidence 99999998776543
No 118
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=1.3e-31 Score=250.95 Aligned_cols=194 Identities=22% Similarity=0.284 Sum_probs=165.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||.||+|.+..+++.+|+|++... ....+.+.+|+++++.++|+| |++++++|..++++|+|||
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY------IVGFYGAFYSDGEISICME 83 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCc------ccceeEEEEECCEEEEEEe
Confidence 36899999999999999999999999998753 233456789999999999887 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCeEEe
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDIRLI 156 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni~l~ 156 (351)
|+ +++|.+++.... .+++..++.++.|++.+ +.|||++ +++|+|+|+.|+.+.
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~~ivH~dlkp~Nili~ 138 (333)
T cd06650 84 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKG-----------------------LTYLREKHKIMHRDVKPSNILVN 138 (333)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhcCCEEecCCChhhEEEc
Confidence 99 899999998754 57888888888888888 9999975 799999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 139 ~------------------------------------------------------------------------------- 139 (333)
T cd06650 139 S------------------------------------------------------------------------------- 139 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
.+.+||+|||++.... .......|++.|+|||++.+..++.++|+||+||++|++++|..||.
T Consensus 140 ----------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 140 ----------------RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred ----------------CCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 3468999999886532 22344678999999999988889999999999999999999999998
Q ss_pred ccCCC
Q psy2006 316 RKTKT 320 (351)
Q Consensus 316 ~~~~~ 320 (351)
..+..
T Consensus 204 ~~~~~ 208 (333)
T cd06650 204 PPDAK 208 (333)
T ss_pred Ccchh
Confidence 66543
No 119
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=6.5e-32 Score=250.12 Aligned_cols=197 Identities=23% Similarity=0.359 Sum_probs=164.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||+|+||+||+|.+..+++.||+|+++... .......+|+++++.++|+| |+++++++..+++.|+|||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN------IVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCC------cceEEEEEeeCCeEEEEEe
Confidence 367999999999999999999999999997532 22345678999999999887 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.| |+|||++|++|||+|+.|+.+.
T Consensus 85 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~a-----------------------L~~lH~~~ivH~dlkp~Nill~-- 138 (309)
T cd07872 85 YLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRG-----------------------LAYCHRRKVLHRDLKPQNLLIN-- 138 (309)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEEC--
Confidence 99889999987764 346777788888888877 9999999999999999999886
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (309)
T cd07872 139 -------------------------------------------------------------------------------- 138 (309)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......+++.|+|||.+.+ ..++.++|+||+||++++|+||..||
T Consensus 139 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf 205 (309)
T cd07872 139 -------------ERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLF 205 (309)
T ss_pred -------------CCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 234689999998865322 2234567889999998875 45788999999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
.+.+..+.
T Consensus 206 ~~~~~~~~ 213 (309)
T cd07872 206 PGSTVEDE 213 (309)
T ss_pred CCCChHHH
Confidence 88765443
No 120
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=9.7e-32 Score=263.48 Aligned_cols=198 Identities=22% Similarity=0.276 Sum_probs=164.7
Q ss_pred ccccCcccceEEEEEEeec-CcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEV-DSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||+|+||.||+|.+..+ ++.||+|.+... ......+.+|+.+|+.++|+| |++++++|..++++||||||
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFG------IVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC------EeEEEEEEEECCEEEEEEEC
Confidence 5799999999999998777 788999987543 233345678999999999888 99999999999999999999
Q ss_pred c-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 80 L-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 80 ~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
+ +++|.+++... ...++++..+..++.|++.| |+|||+++++|||+|+.||.+.
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a-----------------------L~~lH~~~ivHrDlkp~NIll~ 203 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLA-----------------------LDEVHSRKMMHRDLKSANIFLM 203 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEECCcCHHhEEEC
Confidence 9 99999988653 22356677777777777777 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 204 -------------------------------------------------------------------------------- 203 (478)
T PTZ00267 204 -------------------------------------------------------------------------------- 203 (478)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....+||+|||++...... ....+||+.|+|||++.+..++.++|+||+||++|+|++|.
T Consensus 204 ---------------~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~ 268 (478)
T PTZ00267 204 ---------------PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH 268 (478)
T ss_pred ---------------CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 2356899999998753321 23457999999999998888999999999999999999999
Q ss_pred ccccccCCCcee
Q psy2006 312 TLMARKTKTKYF 323 (351)
Q Consensus 312 ~pf~~~~~~~~~ 323 (351)
.||.+.+..+++
T Consensus 269 ~Pf~~~~~~~~~ 280 (478)
T PTZ00267 269 RPFKGPSQREIM 280 (478)
T ss_pred CCCCCCCHHHHH
Confidence 999877655443
No 121
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=9.9e-32 Score=252.55 Aligned_cols=192 Identities=24% Similarity=0.460 Sum_probs=162.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC------C
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH------G 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~------~ 71 (351)
++.||.|+||+||+|.+..+++.||+|++.... .....+.+|+++|+.++|+| |++++++|... .
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHEN------VIGLLDVFTPATSIENFN 93 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCc------hhhhhhhhcccccccccC
Confidence 367999999999999999999999999997532 22345678999999999887 99999998644 3
Q ss_pred eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 72 ~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+.|+++|+++++|.++++.. .+++..++.++.|++.| |+|||+.|++|||+|+.
T Consensus 94 ~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivHrdikp~ 147 (343)
T cd07878 94 EVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRG-----------------------LKYIHSAGIIHRDLKPS 147 (343)
T ss_pred cEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecccCChh
Confidence 68999999999999887643 47888888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 148 Nil~~--------------------------------------------------------------------------- 152 (343)
T cd07878 148 NVAVN--------------------------------------------------------------------------- 152 (343)
T ss_pred hEEEC---------------------------------------------------------------------------
Confidence 99886
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccc
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.+||+|||++...........||+.|+|||++.+ ..++.++|+||+||++|+|++|
T Consensus 153 --------------------~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 212 (343)
T cd07878 153 --------------------EDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG 212 (343)
T ss_pred --------------------CCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC
Confidence 2356899999998876555566788999999999876 4678999999999999999999
Q ss_pred cccccccCC
Q psy2006 311 ITLMARKTK 319 (351)
Q Consensus 311 ~~pf~~~~~ 319 (351)
..||.+.+.
T Consensus 213 ~~pf~~~~~ 221 (343)
T cd07878 213 KALFPGNDY 221 (343)
T ss_pred CCCCCCCCH
Confidence 999976543
No 122
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=1.4e-31 Score=250.94 Aligned_cols=219 Identities=19% Similarity=0.266 Sum_probs=161.7
Q ss_pred ccccCcccceEEEEEEe-----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC-e
Q psy2006 2 CSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG-H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~-~ 72 (351)
++||.|+||+||+|.+. .+++.||+|++... ......+.+|+.+|+.+ .|+| |+++++++...+ .
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------iv~~~~~~~~~~~~ 86 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLN------VVNLLGACTKPNGP 86 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcc------eeeEEeEecCCCCc
Confidence 67999999999999853 34678999999753 23345678999999999 6776 999999887654 7
Q ss_pred EEEEEecc-CCCHHHHHHhcCCC--CCchHH--HHHHHHHHHHhh---------------------------------hc
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYL--PYSLDQ--VRHMSYQLIYAK---------------------------------EN 114 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~--~~~~~~--~~~~~~ql~~~~---------------------------------~~ 114 (351)
+++||||+ +|+|.+++...... .+.+.. ...-+..+.... ..
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 99999999 99999999865321 111100 000000000000 00
Q ss_pred CCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHH
Q psy2006 115 NYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQL 194 (351)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~ 194 (351)
...++++..+..++.|++.||.|||++|++|||+|+.|+.+.+
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~------------------------------------- 209 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE------------------------------------- 209 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC-------------------------------------
Confidence 1125777888888999999999999999999999999998761
Q ss_pred HHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----
Q psy2006 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----- 269 (351)
Q Consensus 195 ~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----- 269 (351)
...+||+|||++.....
T Consensus 210 ----------------------------------------------------------~~~~kl~DfG~a~~~~~~~~~~ 231 (338)
T cd05102 210 ----------------------------------------------------------NNVVKICDFGLARDIYKDPDYV 231 (338)
T ss_pred ----------------------------------------------------------CCcEEEeecccccccccCcchh
Confidence 34689999998864221
Q ss_pred ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCCCc
Q psy2006 270 HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTKTK 321 (351)
Q Consensus 270 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~ 321 (351)
......+++.|+|||.+.+..++.++|+|||||++|++++ |..||.+....+
T Consensus 232 ~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~ 284 (338)
T cd05102 232 RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE 284 (338)
T ss_pred cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH
Confidence 1123345678999999988889999999999999999996 999998866544
No 123
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=1.7e-31 Score=271.57 Aligned_cols=206 Identities=17% Similarity=0.166 Sum_probs=154.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||.|+||.||+|.+..+++.||+|++... ....+.+.+|+++++.+.|+| |+++++++..++..|+||
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPN------IVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPG------IVPVYSICSDGDPVYYTM 81 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcC------cCeEEEEEeeCCEEEEEE
Confidence 6899999999999999999999999999753 223456788999999999888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCC-CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 78 EIL-GLSVFDFLKENNY-LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~-~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||+ |++|.+++..... ..++.... ...+...+..++.|++.||+|||++|++|||+||.||.+
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~---------------~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL 146 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELA---------------EKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhh---------------cccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE
Confidence 999 8999999875321 01111100 012223333444444555999999999999999999755
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 147 d~------------------------------------------------------------------------------ 148 (932)
T PRK13184 147 GL------------------------------------------------------------------------------ 148 (932)
T ss_pred cC------------------------------------------------------------------------------
Confidence 41
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceec---------------------cccccccccceeeCceeeecCCCCCc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---------------------EHHSTIVSTRHYRAPEVILELGWAQP 294 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 294 (351)
.+.++|+|||++.... ......+||+.|+|||.+.+..++.+
T Consensus 149 -----------------dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 149 -----------------FGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred -----------------CCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 1234455555443210 01123578999999999999999999
Q ss_pred cceeeeeeeeEeeccccccccccCCCcee
Q psy2006 295 CDVWSIGCIIFELYLGITLMARKTKTKYF 323 (351)
Q Consensus 295 ~DiwslG~~l~~l~tG~~pf~~~~~~~~~ 323 (351)
+|+||+||++|+|+||..||.+.+..+..
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 99999999999999999999886665544
No 124
>KOG0193|consensus
Probab=99.97 E-value=1e-31 Score=253.90 Aligned_cols=194 Identities=18% Similarity=0.239 Sum_probs=167.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|.||+||+|.+ .| .||||++..+ ...-+.+..|+.++++.+|.| |+-.++++..+++ .||..
T Consensus 398 ~rIGsGsFGtV~Rg~w--hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~N------IlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRW--HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHEN------ILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred ceeccccccceeeccc--cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhh------heeeehhhcCCce-eeeeh
Confidence 5799999999999994 34 4999999764 244567899999999999988 9999999999988 99999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
+| |.+|+.+++-.. ..|.....+.|++|++.| ++|||.++|+|||+|..||.|-
T Consensus 468 wCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqG-----------------------M~YLHAK~IIHrDLKSnNIFl~- 522 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQG-----------------------MDYLHAKNIIHRDLKSNNIFLH- 522 (678)
T ss_pred hccCchhhhhccchh-hhhhHHHHHHHHHHHHHh-----------------------hhhhhhhhhhhhhccccceEEc-
Confidence 99 889999998775 568888899999999988 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 523 -------------------------------------------------------------------------------- 522 (678)
T KOG0193|consen 523 -------------------------------------------------------------------------------- 522 (678)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCccee-----ccccccccccceeeCceeeec---CCCCCccceeeeeeeeEeecc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFD-----DEHHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-----~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~t 309 (351)
....|||+|||++... ........|...|||||+++. .+|++.+||||||+++|||+|
T Consensus 523 --------------~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELlt 588 (678)
T KOG0193|consen 523 --------------EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLT 588 (678)
T ss_pred --------------cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHh
Confidence 2367999999998652 223455678889999999974 478999999999999999999
Q ss_pred ccccccccCCCceee
Q psy2006 310 GITLMARKTKTKYFY 324 (351)
Q Consensus 310 G~~pf~~~~~~~~~~ 324 (351)
|..||...+.+.++.
T Consensus 589 g~lPysi~~~dqIif 603 (678)
T KOG0193|consen 589 GELPYSIQNRDQIIF 603 (678)
T ss_pred CcCCcCCCChhheEE
Confidence 999999888777765
No 125
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=1.5e-31 Score=252.39 Aligned_cols=188 Identities=21% Similarity=0.312 Sum_probs=153.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||+||+|.+..+++.||||++... ....+.+.+|+++++.++|+| |++++++|...+.+++|||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPN------VVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCC------cceeeeEeccCCeEEEEEe
Confidence 36799999999999999889999999999643 233456789999999999887 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+. ...++..+..++.|++.| |.|||++|++|||+|+.||.+.
T Consensus 153 ~~~~~~L~~~------~~~~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivHrDlkp~NIll~- 202 (353)
T PLN00034 153 FMDGGSLEGT------HIADEQFLADVARQILSG-----------------------IAYLHRRHIVHRDIKPSNLLIN- 202 (353)
T ss_pred cCCCCccccc------ccCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecCCCHHHEEEc-
Confidence 99 8887642 234566666777777776 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 203 -------------------------------------------------------------------------------- 202 (353)
T PLN00034 203 -------------------------------------------------------------------------------- 202 (353)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeec-----CCCCCccceeeeeeeeEeecc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~l~t 309 (351)
....+||+|||++...... .....||+.|+|||.+.. ...+.++|||||||++|++++
T Consensus 203 --------------~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~ 268 (353)
T PLN00034 203 --------------SAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL 268 (353)
T ss_pred --------------CCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHh
Confidence 2356899999998753322 234678999999998743 223568999999999999999
Q ss_pred ccccccccC
Q psy2006 310 GITLMARKT 318 (351)
Q Consensus 310 G~~pf~~~~ 318 (351)
|+.||....
T Consensus 269 g~~pf~~~~ 277 (353)
T PLN00034 269 GRFPFGVGR 277 (353)
T ss_pred CCCCCCCCC
Confidence 999998443
No 126
>KOG1187|consensus
Probab=99.97 E-value=5.3e-31 Score=247.53 Aligned_cols=192 Identities=22% Similarity=0.267 Sum_probs=163.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhh-hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-eEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY-REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-HMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-~~~lV~E~ 79 (351)
..||+|+||.||+|.. .+++.||||.+...... ..++.+|+.++.+++|+| +++|++++.+.+ +.+||+||
T Consensus 81 ~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~N------lv~LlGyC~e~~~~~~LVYEy 153 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPN------LVKLLGYCLEGGEHRLLVYEY 153 (361)
T ss_pred cceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcC------cccEEEEEecCCceEEEEEEc
Confidence 3699999999999996 34499999988764433 456999999999999888 999999999999 69999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc---ccccccCCCCeEE
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK---REVRRVRRCDIRL 155 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~d~k~~ni~l 155 (351)
+ .|+|.+.+......++++..-.+|+.+++.| |+|||... |+|||+|++||.|
T Consensus 154 m~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~g-----------------------L~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 154 MPNGSLEDHLHGKKGEPLDWETRLKIALGAARG-----------------------LAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred cCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHccCCCCCEecCCCCHHHeeE
Confidence 9 8999999988753367888888888888888 99999854 9999999999998
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 211 D------------------------------------------------------------------------------- 211 (361)
T KOG1187|consen 211 D------------------------------------------------------------------------------- 211 (361)
T ss_pred C-------------------------------------------------------------------------------
Confidence 7
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc-cc--ccc-cccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-HH--STI-VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-~~--~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
.....||+|||++..... .. ... .||..|++||.+..+..+.++||||||+++.|++||+
T Consensus 212 ----------------~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr 275 (361)
T KOG1187|consen 212 ----------------EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR 275 (361)
T ss_pred ----------------CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence 356799999999965433 22 222 8999999999998888899999999999999999999
Q ss_pred ccccccC
Q psy2006 312 TLMARKT 318 (351)
Q Consensus 312 ~pf~~~~ 318 (351)
.+.+...
T Consensus 276 ~~~d~~~ 282 (361)
T KOG1187|consen 276 KAVDQSR 282 (361)
T ss_pred cccCCCC
Confidence 9888643
No 127
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.9e-31 Score=252.74 Aligned_cols=192 Identities=22% Similarity=0.409 Sum_probs=160.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+.|+| |++++++|.... +
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN------IIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCC------ccccceeecccccccccCe
Confidence 5799999999999999999999999999753 233456778999999999888 999999886543 6
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+||||++++|.+.+.. .+++..++.++.|++.| |+|||++|++|||+|+.|
T Consensus 104 ~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~ivH~Dlkp~N 156 (364)
T cd07875 104 VYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCG-----------------------IKHLHSAGIIHRDLKPSN 156 (364)
T ss_pred EEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHH-----------------------HHHHhhCCeecCCCCHHH
Confidence 899999998899888754 35677777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
|.+.
T Consensus 157 Ill~---------------------------------------------------------------------------- 160 (364)
T cd07875 157 IVVK---------------------------------------------------------------------------- 160 (364)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9886
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
....+||+|||++..... ......||+.|+|||++.+..++.++|+|||||++|+|++|
T Consensus 161 -------------------~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 221 (364)
T cd07875 161 -------------------SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221 (364)
T ss_pred -------------------CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhC
Confidence 235689999999875432 22346789999999999998999999999999999999999
Q ss_pred cccccccCCCc
Q psy2006 311 ITLMARKTKTK 321 (351)
Q Consensus 311 ~~pf~~~~~~~ 321 (351)
..||.+.+..+
T Consensus 222 ~~pf~~~~~~~ 232 (364)
T cd07875 222 GVLFPGTDHID 232 (364)
T ss_pred CCCCCCCCHHH
Confidence 99998766433
No 128
>KOG0696|consensus
Probab=99.97 E-value=1.6e-32 Score=248.77 Aligned_cols=198 Identities=18% Similarity=0.273 Sum_probs=166.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
..||.|+||.|-+|..+.+.+.||||+++++ .++.+....|-++|.....+- ++++|...|..-+.+|+||
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kpp-----FL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP-----FLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCc-----hHHHHHHHhhhhhheeeEE
Confidence 4699999999999999999999999999875 234444556777776654322 4999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ ||+|.-.|+..+ .+.|..|.-++..|+.| |-+||++||+.||+|.+|++|.
T Consensus 430 EyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaig-----------------------LFFLh~kgIiYRDLKLDNvmLd 484 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIG-----------------------LFFLHSKGIIYRDLKLDNVMLD 484 (683)
T ss_pred EEecCchhhhHHHHhc--ccCCchhhhhhHHHHHH-----------------------hhhhhcCCeeeeeccccceEec
Confidence 999 999998888875 45555555555555544 9999999999999999999986
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 485 -------------------------------------------------------------------------------- 484 (683)
T KOG0696|consen 485 -------------------------------------------------------------------------------- 484 (683)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.+||+|||+|.- ......+.+|||.|+|||++...+|+.++|+||+|++||||+.|++|
T Consensus 485 ---------------~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpP 549 (683)
T KOG0696|consen 485 ---------------SEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP 549 (683)
T ss_pred ---------------cCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCC
Confidence 467899999999974 33344678999999999999999999999999999999999999999
Q ss_pred ccccCCCceee
Q psy2006 314 MARKTKTKYFY 324 (351)
Q Consensus 314 f~~~~~~~~~~ 324 (351)
|++.+.+++|.
T Consensus 550 FdGeDE~elF~ 560 (683)
T KOG0696|consen 550 FDGEDEDELFQ 560 (683)
T ss_pred CCCCCHHHHHH
Confidence 99999999874
No 129
>KOG0608|consensus
Probab=99.97 E-value=1.2e-31 Score=253.74 Aligned_cols=233 Identities=19% Similarity=0.291 Sum_probs=169.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
|+.||.|+||+|++++--.+...||+|.+.+.. ....++..|..||......- ||+||-.|.+.+.+|+|
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~W------VVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEW------VVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcc------eEEEEEEeccCCceEEE
Confidence 467999999999999977789999999997643 33456778999998876444 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC---
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD--- 152 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n--- 152 (351)
|+|+ ||++..+|.+.+ -|+|+.++-++..|.-| +++.|..|++|||||++|
T Consensus 708 MdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcA-----------------------iesVHkmGFIHRDiKPDNILI 762 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCA-----------------------IESVHKMGFIHRDIKPDNILI 762 (1034)
T ss_pred EeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHH-----------------------HHHHHhccceecccCccceEE
Confidence 9999 999999999886 35666666655555555 999999999999999877
Q ss_pred -----eEEeecCCcccCCCCccc-ccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 153 -----IRLIDFGSATFDDEHHST-IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 153 -----i~l~Dfg~s~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
|||.|||+|.-....+.. +.+...
T Consensus 763 DrdGHIKLTDFGLCTGfRWTHdskYYq~gd-------------------------------------------------- 792 (1034)
T KOG0608|consen 763 DRDGHIKLTDFGLCTGFRWTHDSKYYQEGD-------------------------------------------------- 792 (1034)
T ss_pred ccCCceeeeeccccccceeccccccccCCC--------------------------------------------------
Confidence 599999999765444331 111000
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcce-eccccccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATF-DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
..|... .++-+... .....+|+..+.-.+. ......+.+||+.|+|||++...+++...|+||+|++||
T Consensus 793 H~RqDS-------mep~~e~~---d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 793 HHRQDS-------MEPSPEWA---DISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccc-------CCCchhhc---cccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 000000 00000000 0111233332221111 222345789999999999999999999999999999999
Q ss_pred eeccccccccccCCCceee
Q psy2006 306 ELYLGITLMARKTKTKYFY 324 (351)
Q Consensus 306 ~l~tG~~pf~~~~~~~~~~ 324 (351)
+|+.|++||...+..+.-+
T Consensus 863 em~~g~~pf~~~tp~~tq~ 881 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQY 881 (1034)
T ss_pred HHhhCCCCccCCCCCccee
Confidence 9999999999998777654
No 130
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=2.9e-31 Score=250.66 Aligned_cols=190 Identities=22% Similarity=0.407 Sum_probs=159.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++|+| |++++++|.... +
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN------IISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCc------hhceeeeeeccccccccce
Confidence 6799999999999999899999999999753 233456778999999999888 999999987543 6
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+||||++++|.+.+.. .+++..++.++.|++.| |+|||++|++|||+|++|
T Consensus 97 ~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~a-----------------------L~~LH~~givHrDikp~N 149 (355)
T cd07874 97 VYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCG-----------------------IKHLHSAGIIHRDLKPSN 149 (355)
T ss_pred eEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCChHH
Confidence 899999998888887754 36777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 150 ill~---------------------------------------------------------------------------- 153 (355)
T cd07874 150 IVVK---------------------------------------------------------------------------- 153 (355)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9886
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.+||+|||++..... ......||+.|+|||++.+..++.++|+||+||++|+|++|
T Consensus 154 -------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 214 (355)
T cd07874 154 -------------------SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214 (355)
T ss_pred -------------------CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 235689999999875332 22446789999999999988999999999999999999999
Q ss_pred cccccccCC
Q psy2006 311 ITLMARKTK 319 (351)
Q Consensus 311 ~~pf~~~~~ 319 (351)
..||.+.+.
T Consensus 215 ~~pf~~~~~ 223 (355)
T cd07874 215 KILFPGRDY 223 (355)
T ss_pred CCCCCCCCH
Confidence 999987653
No 131
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.3e-31 Score=260.34 Aligned_cols=198 Identities=18% Similarity=0.192 Sum_probs=164.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------- 71 (351)
+.||+|+||+||+|.+..+++.||||++... ......+.+|+.++..+.|.+ |+++.+.|...+
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~------iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFS------IVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCc------EEEeecceecccccCcccc
Confidence 5799999999999999999999999999653 233456778999999998777 999988876443
Q ss_pred -eEEEEEecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 72 -HMCIAFEIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 72 -~~~lV~E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
.+++||||+ +|+|.++++... ...+++..+..++.|++.+ |+|+|+++++|||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~a-----------------------L~~lH~~~IiHrD 168 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA-----------------------VHHVHSKHMIHRD 168 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCC
Confidence 478999999 899999997542 2357777777777777777 9999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+.||.+.
T Consensus 169 LKP~NILl~----------------------------------------------------------------------- 177 (496)
T PTZ00283 169 IKSANILLC----------------------------------------------------------------------- 177 (496)
T ss_pred CCHHHEEEe-----------------------------------------------------------------------
Confidence 999999887
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGC 302 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 302 (351)
....+||+|||++..... ......||+.|+|||++.+..++.++|+|||||
T Consensus 178 ------------------------~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGv 233 (496)
T PTZ00283 178 ------------------------SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGV 233 (496)
T ss_pred ------------------------CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHH
Confidence 235699999999865322 223467999999999999889999999999999
Q ss_pred eeEeeccccccccccCCCcee
Q psy2006 303 IIFELYLGITLMARKTKTKYF 323 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~~~~~~ 323 (351)
++|+|++|..||.+.+..+++
T Consensus 234 ilyeLltG~~Pf~~~~~~~~~ 254 (496)
T PTZ00283 234 LLYELLTLKRPFDGENMEEVM 254 (496)
T ss_pred HHHHHHHCCCCCCCCCHHHHH
Confidence 999999999999887655543
No 132
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=3.6e-30 Score=231.43 Aligned_cols=197 Identities=22% Similarity=0.278 Sum_probs=167.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||.|+||.||++.+..+++.||+|.+... ....+...+|+.+++.++|+| |+++++.|...+++|+||||
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN------IVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCC------cceEEEEEEECCEEEEEEee
Confidence 6899999999999999999999999998642 334466788999999999887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.......+++..+..++.|++.+ +.+||+.|++|+|+++.|+.+.+
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a-----------------------l~~lH~~~i~H~dl~p~nili~~- 135 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG-----------------------VQHIHEKRVLHRDIKSKNIFLTQ- 135 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHhhCCcccCCCCcceEEECC-
Confidence 9 8899999877654567888888888888888 99999999999999999998762
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (255)
T cd08219 136 -------------------------------------------------------------------------------- 135 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
...++++|||.+..... ......|++.|+|||++.+..++.++|+||+|+++|++++|..||.
T Consensus 136 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 201 (255)
T cd08219 136 --------------NGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQ 201 (255)
T ss_pred --------------CCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCC
Confidence 34689999998865322 1234568889999999988889999999999999999999999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
..+....
T Consensus 202 ~~~~~~~ 208 (255)
T cd08219 202 ANSWKNL 208 (255)
T ss_pred CCCHHHH
Confidence 7664443
No 133
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=4e-31 Score=253.03 Aligned_cols=188 Identities=20% Similarity=0.294 Sum_probs=159.9
Q ss_pred ccccCcccceEEEEEEe--ecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVY--EVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||.|+||.||+|... .+++.||+|.+... ....+|+++|+.++|+| |++++++|....+.|+|||+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~------iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRA------IINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCC------ccceeeeEeeCCEEEEEehh
Confidence 67999999999999754 35688999998753 34567999999999888 99999999999999999999
Q ss_pred cCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 80 ~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
++++|.+++... ..+++..++.++.|++.| |.|||++|++|||+|+.||.+.
T Consensus 168 ~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~a-----------------------L~~LH~~givHrDlkp~Nill~--- 219 (392)
T PHA03207 168 YKCDLFTYVDRS--GPLPLEQAITIQRRLLEA-----------------------LAYLHGRGIIHRDVKTENIFLD--- 219 (392)
T ss_pred cCCCHHHHHHhc--CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCCHHHEEEc---
Confidence 999999999544 367888888888888888 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 220 -------------------------------------------------------------------------------- 219 (392)
T PHA03207 220 -------------------------------------------------------------------------------- 219 (392)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......||+.|+|||++.+..++.++|+||+||++|+|++|..||
T Consensus 220 ------------~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 220 ------------EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred ------------CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 235689999998864321 122457899999999999889999999999999999999999999
Q ss_pred cccCC
Q psy2006 315 ARKTK 319 (351)
Q Consensus 315 ~~~~~ 319 (351)
.+...
T Consensus 288 ~~~~~ 292 (392)
T PHA03207 288 FGKQV 292 (392)
T ss_pred CCCCC
Confidence 87653
No 134
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=6.9e-31 Score=243.75 Aligned_cols=197 Identities=21% Similarity=0.358 Sum_probs=155.6
Q ss_pred ccccCcccceEEEEEEee--cCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee--CCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE--VDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY--HGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~--~~~~~lV~ 77 (351)
++||+|+||+||+|.++. +++.||+|.+.... ....+.+|+++++.++|+| |++++++|.. +.++|+||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPN------VIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCC------eeeEEEEEeccCCCeEEEEE
Confidence 479999999999999653 66899999997532 2345678999999999888 9999999854 45899999
Q ss_pred eccCCCHHHHHHhcC-------CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 78 EILGLSVFDFLKENN-------YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 78 E~~g~sL~~~l~~~~-------~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
||++++|.+++.... ...+++..++.++.|++.| |.|||+++++|||+|+
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a-----------------------L~~lH~~~ivH~Dlkp 136 (317)
T cd07867 80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG-----------------------IHYLHANWVLHRDLKP 136 (317)
T ss_pred eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEcCCCCH
Confidence 999889999886431 1235666666666666666 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+-+
T Consensus 137 ~Nil~~~~~----------------------------------------------------------------------- 145 (317)
T cd07867 137 ANILVMGEG----------------------------------------------------------------------- 145 (317)
T ss_pred HHEEEccCC-----------------------------------------------------------------------
Confidence 999875100
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecC-CCCCccceeeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCI 303 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~ 303 (351)
.....+||+|||++..... ......||+.|+|||.+.+. .++.++|+||+||+
T Consensus 146 --------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i 205 (317)
T cd07867 146 --------------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 205 (317)
T ss_pred --------------------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHH
Confidence 0235689999999875322 12345778999999998764 57899999999999
Q ss_pred eEeeccccccccccCC
Q psy2006 304 IFELYLGITLMARKTK 319 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~ 319 (351)
+|+++||.+||.....
T Consensus 206 l~el~tg~~~f~~~~~ 221 (317)
T cd07867 206 FAELLTSEPIFHCRQE 221 (317)
T ss_pred HHHHHhCCCCcccccc
Confidence 9999999999976543
No 135
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=8.9e-31 Score=236.72 Aligned_cols=198 Identities=19% Similarity=0.219 Sum_probs=167.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
++||+|+||.||+|.+..+++.||+|++.......+.+.+|+++++.+.|++ |+++++++...+.+++||||+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCC------hhheEEEEcCCCCcEEEEEeCC
Confidence 5799999999999999999999999999865444567889999999999877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......+++..+..++.|++.+ |.|||+++++|+|+++.|+.+.+
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~dlkp~nil~~~--- 139 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSA-----------------------MEYLEKKNFIHRDLAARNCLVGE--- 139 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeecccCcceEEEcC---
Confidence 8999999987654567788888888888888 99999999999999999998862
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 140 -------------------------------------------------------------------------------- 139 (263)
T cd05052 140 -------------------------------------------------------------------------------- 139 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
...++|+|||.+....... ....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.
T Consensus 140 ------------~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 207 (263)
T cd05052 140 ------------NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 207 (263)
T ss_pred ------------CCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 3468999999886533211 12233567999999988889999999999999999998 999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+.+
T Consensus 208 ~~~~~~~~ 215 (263)
T cd05052 208 GIDLSQVY 215 (263)
T ss_pred CCCHHHHH
Confidence 87665543
No 136
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=1e-30 Score=248.62 Aligned_cols=219 Identities=21% Similarity=0.270 Sum_probs=161.5
Q ss_pred ccccCcccceEEEEEEeec-----CcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-----DSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+.||+|+||.||+|++... ++.||+|++... ....+.+.+|+++++.+ .|+| |+++++++...++.
T Consensus 44 ~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~n------Iv~~~~~~~~~~~~ 117 (374)
T cd05106 44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKN------IVNLLGACTHGGPV 117 (374)
T ss_pred heecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCc------eeeEeeEecCCCCe
Confidence 6799999999999997543 358999999753 23345678899999999 6777 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHH-----------HHHHHH--------------------HH-------------
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQ-----------VRHMSY--------------------QL------------- 108 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~-----------~~~~~~--------------------ql------------- 108 (351)
|+||||| +|+|.+++............ ...... ++
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 9999999 99999999764210000000 000000 00
Q ss_pred H-HhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCC
Q psy2006 109 I-YAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASD 187 (351)
Q Consensus 109 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~ 187 (351)
. .........+++..+..++.|++.||.|||++|++|||+|+.|+.+.+
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~------------------------------ 247 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD------------------------------ 247 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC------------------------------
Confidence 0 000011124677788888888888899999999999999999998862
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCccee
Q psy2006 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD 267 (351)
Q Consensus 188 ~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~ 267 (351)
...++|+|||++...
T Consensus 248 -----------------------------------------------------------------~~~~kL~DfGla~~~ 262 (374)
T cd05106 248 -----------------------------------------------------------------GRVAKICDFGLARDI 262 (374)
T ss_pred -----------------------------------------------------------------CCeEEEeeceeeeec
Confidence 245899999988643
Q ss_pred cccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCCCc
Q psy2006 268 DEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTKTK 321 (351)
Q Consensus 268 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~ 321 (351)
.... ....+++.|+|||++.+..++.++|+|||||++|++++ |..||......+
T Consensus 263 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~ 322 (374)
T cd05106 263 MNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS 322 (374)
T ss_pred cCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence 2211 12234567999999988889999999999999999997 999998765543
No 137
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=9.1e-31 Score=239.70 Aligned_cols=194 Identities=12% Similarity=0.191 Sum_probs=162.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhh----hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee----CCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY----REAARLEINALQKIGEKDPNGRHLCVKMLDWFDY----HGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~----~~~~ 73 (351)
..||+|+++.||+|. .+++.||+|++...... .+.+.+|+.+|+++.|+| |+++++++.. ...+
T Consensus 26 ~~i~~g~~~~v~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGI--FNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNN------ILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEE--ECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCC------EEEEeeeEEecccCCCce
Confidence 358999999999999 48999999999764322 355679999999999887 9999999977 3489
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRC 151 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ 151 (351)
++||||+ +|+|.+++.... .+++.....++.|++.| +.|||+. +++|||+|+.
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~-----------------------l~~lH~~~~~~Hrdlkp~ 152 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKG-----------------------LYNLYKYTNKPYKNLTSV 152 (283)
T ss_pred EEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHH-----------------------HHHHHhcCCCCCCcCChh
Confidence 9999999 899999998754 56777777777777777 9999984 8999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.+
T Consensus 153 nill~~-------------------------------------------------------------------------- 158 (283)
T PHA02988 153 SFLVTE-------------------------------------------------------------------------- 158 (283)
T ss_pred hEEECC--------------------------------------------------------------------------
Confidence 998872
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec--CCCCCccceeeeeeeeEeecc
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~t 309 (351)
.+.+||+|||++...........|++.|+|||.+.+ ..++.++|+|||||++|++++
T Consensus 159 ---------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~ 217 (283)
T PHA02988 159 ---------------------NYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT 217 (283)
T ss_pred ---------------------CCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH
Confidence 356899999998764444445678899999999976 678999999999999999999
Q ss_pred ccccccccCCCcee
Q psy2006 310 GITLMARKTKTKYF 323 (351)
Q Consensus 310 G~~pf~~~~~~~~~ 323 (351)
|..||.+.+..+++
T Consensus 218 g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 218 GKIPFENLTTKEIY 231 (283)
T ss_pred CCCCCCCCCHHHHH
Confidence 99999987765544
No 138
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=1e-30 Score=241.07 Aligned_cols=196 Identities=23% Similarity=0.376 Sum_probs=163.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||.||+|.+..+++.||+|.+.... .......+|+.+++.++|+| |+++++++...+..|+|||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------I~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN------IVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCC------cceEEEEEecCCeEEEEEe
Confidence 367999999999999998899999999997432 22345678999999999888 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.| |.|||+.+++|+|++++|+.+.
T Consensus 85 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~a-----------------------L~~lH~~~i~H~dlkp~Nil~~-- 138 (301)
T cd07873 85 YLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRG-----------------------LNYCHRRKVLHRDLKPQNLLIN-- 138 (301)
T ss_pred ccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeCCCCCHHHEEEC--
Confidence 99889999987754 357788888888888888 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (301)
T cd07873 139 -------------------------------------------------------------------------------- 138 (301)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......+++.|+|||.+.+. .++.++|+||+||++|+|++|.+||
T Consensus 139 -------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f 205 (301)
T cd07873 139 -------------ERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLF 205 (301)
T ss_pred -------------CCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCC
Confidence 234689999998865322 22334568899999988764 4688999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
.+.+..+
T Consensus 206 ~~~~~~~ 212 (301)
T cd07873 206 PGSTVEE 212 (301)
T ss_pred CCCCHHH
Confidence 8776543
No 139
>KOG0614|consensus
Probab=99.97 E-value=1.2e-32 Score=254.95 Aligned_cols=196 Identities=23% Similarity=0.310 Sum_probs=170.7
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
-||.|+||.|=++........+|+|++++. ....+++..|-+||...+++. ||+||-.|.++..+|++||
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~f------IvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDF------IVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchH------HHHHHHHhccchhhhhhHH
Confidence 489999999999987655667999999864 355678899999999998666 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
.| ||.|...++..+ .|.+..++-++.-+++| ++|||++||+.||+||.|+.|.
T Consensus 501 aClGGElWTiLrdRg--~Fdd~tarF~~acv~EA-----------------------feYLH~k~iIYRDLKPENllLd- 554 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG--SFDDYTARFYVACVLEA-----------------------FEYLHRKGIIYRDLKPENLLLD- 554 (732)
T ss_pred hhcCchhhhhhhhcC--CcccchhhhhHHHHHHH-----------------------HHHHHhcCceeccCChhheeec-
Confidence 99 999999999887 45555555555555555 9999999999999999999887
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 555 -------------------------------------------------------------------------------- 554 (732)
T KOG0614|consen 555 -------------------------------------------------------------------------------- 554 (732)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+||.|||++... +....+++|||.|.|||+++..+...++|.||||+++|||++|.+||.
T Consensus 555 --------------~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 555 --------------NRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred --------------cCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 3578999999999874 445578999999999999999999999999999999999999999999
Q ss_pred ccCCCceee
Q psy2006 316 RKTKTKYFY 324 (351)
Q Consensus 316 ~~~~~~~~~ 324 (351)
+-+.+++|.
T Consensus 621 ~~dpmktYn 629 (732)
T KOG0614|consen 621 GVDPMKTYN 629 (732)
T ss_pred CCchHHHHH
Confidence 999999884
No 140
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=2.5e-30 Score=233.22 Aligned_cols=198 Identities=20% Similarity=0.236 Sum_probs=165.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||+|+||+||+|.+ .++..||+|.+.......+.+.+|+.+++.++|++ |+++++.+...+..++||||+
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 11 VKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK------LVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred eeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCC------eeeEEEEEcCCCCcEEEEecC
Confidence 47899999999999996 56778999998765445567889999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++++.....+++..+..++.|++.+ |+|||+.+++|+|+++.|+.+.
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~LH~~~i~H~dl~p~nili~--- 137 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG-----------------------MAYIERKNYIHRDLRAANVLVS--- 137 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccccchhhEEec---
Confidence 8999999987655567777777888888877 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (261)
T cd05072 138 -------------------------------------------------------------------------------- 137 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
....++|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++|++++ |..||
T Consensus 138 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~ 205 (261)
T cd05072 138 ------------ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPY 205 (261)
T ss_pred ------------CCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCC
Confidence 23468999999986533211 22345568999999988888999999999999999998 99999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
...+..+..
T Consensus 206 ~~~~~~~~~ 214 (261)
T cd05072 206 PGMSNSDVM 214 (261)
T ss_pred CCCCHHHHH
Confidence 877655543
No 141
>KOG0194|consensus
Probab=99.97 E-value=6.1e-30 Score=242.96 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=157.6
Q ss_pred ccccCcccceEEEEEEeecCc---E-EEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS---V-VALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~---~-vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++||+|+||.||+|..+..+. . ||+|..+.+ ......+..|+++|+.++|+| ||+++++.....=+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~N------VVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPN------VVRFYGVAVLEEPL 236 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCC------EEEEEEEEcCCCcc
Confidence 589999999999999876422 3 899999842 345667889999999999988 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
+||||+| ||+|.++|+..+. .++...-..++.+.+.| ++|||+++++|||+-.-|
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~G-----------------------l~YLh~k~~IHRDIAARN 292 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARG-----------------------LEYLHSKNCIHRDIAARN 292 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhH-----------------------HHHHHHCCCcchhHhHHH
Confidence 9999999 9999999999863 35555555555555554 999999999999998888
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.++
T Consensus 293 cL~~---------------------------------------------------------------------------- 296 (474)
T KOG0194|consen 293 CLYS---------------------------------------------------------------------------- 296 (474)
T ss_pred heec----------------------------------------------------------------------------
Confidence 7766
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecccc-c--cccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-S--TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
....+||+|||++....... . ...-...|+|||++...-|+.++|||||||++||+.+
T Consensus 297 -------------------~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~ 357 (474)
T KOG0194|consen 297 -------------------KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFE 357 (474)
T ss_pred -------------------CCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeec
Confidence 12347999999986543111 1 1123468999999999999999999999999999998
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..||.+.+..++
T Consensus 358 ~g~~Py~g~~~~~v 371 (474)
T KOG0194|consen 358 NGAEPYPGMKNYEV 371 (474)
T ss_pred cCCCCCCCCCHHHH
Confidence 8999999885544
No 142
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=1.7e-30 Score=235.38 Aligned_cols=195 Identities=16% Similarity=0.175 Sum_probs=159.2
Q ss_pred ccccCcccceEEEEEEe---ecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||.||+|.+. ..+..||+|.++... .....+.+|+.+++.++|+| |+++++++..+++.|+|
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSN------IVRLEGVITRGNTMMIV 84 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCC------cCeEEEEEecCCCcEEE
Confidence 57999999999999875 356799999997542 33456788999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.| |+|||+++++|||+|+.|+.+
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~a-----------------------l~~lH~~~iiH~dikp~nili 140 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASG-----------------------MKYLSEMGYVHKGLAAHKVLV 140 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeeccccHhhEEE
Confidence 9999 889999988754 357888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 141 ~~------------------------------------------------------------------------------ 142 (266)
T cd05064 141 NS------------------------------------------------------------------------------ 142 (266)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecCCCCCccceeeeeeeeEeec-cc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY-LG 310 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~-tG 310 (351)
...++++|||........ .....++..|+|||.+.+..++.++|+||+||++|+++ +|
T Consensus 143 -----------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 205 (266)
T cd05064 143 -----------------DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred -----------------CCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCC
Confidence 345788888876442111 11233457899999998889999999999999999966 59
Q ss_pred cccccccCCCc
Q psy2006 311 ITLMARKTKTK 321 (351)
Q Consensus 311 ~~pf~~~~~~~ 321 (351)
..||...+..+
T Consensus 206 ~~p~~~~~~~~ 216 (266)
T cd05064 206 ERPYWDMSGQD 216 (266)
T ss_pred CCCcCcCCHHH
Confidence 99998776554
No 143
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.1e-30 Score=238.92 Aligned_cols=195 Identities=21% Similarity=0.285 Sum_probs=165.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||+|+||.||++.+..+++.+|+|.+... ......+.+|++++++++|+| |+++++.|..++++|+|||
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPY------IVGFYGAFYSDGEISICME 79 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC------CCeEEEEEeeCCEEEEEee
Confidence 36799999999999999999999999998753 233456788999999999887 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEe
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLI 156 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~ 156 (351)
|+ +++|.++++... .+++..++.++.|++.+ |.|||+ .+++|+|+++.|+.+.
T Consensus 80 y~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~~i~H~dl~p~nil~~ 134 (308)
T cd06615 80 HMDGGSLDQVLKKAG--RIPENILGKISIAVLRG-----------------------LTYLREKHKIMHRDVKPSNILVN 134 (308)
T ss_pred ccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhhCCEEECCCChHHEEEe
Confidence 99 889999998764 57888888888888888 999997 5899999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 135 ~------------------------------------------------------------------------------- 135 (308)
T cd06615 135 S------------------------------------------------------------------------------- 135 (308)
T ss_pred c-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
...++|+|||++.... .......|++.|+|||.+.+..++.++|+||+||+++++++|..||.
T Consensus 136 ----------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 136 ----------------RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred ----------------CCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 3458999999876432 22345678899999999888888999999999999999999999997
Q ss_pred ccCCCc
Q psy2006 316 RKTKTK 321 (351)
Q Consensus 316 ~~~~~~ 321 (351)
..+...
T Consensus 200 ~~~~~~ 205 (308)
T cd06615 200 PPDAKE 205 (308)
T ss_pred Ccchhh
Confidence 665433
No 144
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=2.7e-30 Score=234.35 Aligned_cols=194 Identities=19% Similarity=0.281 Sum_probs=162.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeC------CeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYH------GHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~------~~~~ 74 (351)
++||.|+||.||+|.+..+++.||+|++.........+.+|+.+++.+ .|+| |++++++|... .++|
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~------i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN------IATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCC------eeeEeeEEeecCCCCCCcEEE
Confidence 579999999999999999999999999976555556778899999998 4666 99999999753 4799
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+||||+ +++|.+++.......+++..+..++.|++.+ +.|||+++++|+|+++.|+
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~-----------------------l~~LH~~~ivh~dl~~~ni 142 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG-----------------------LSHLHQHKVIHRDIKGQNV 142 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCCccCCCCHHHE
Confidence 999999 7899999987655567888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 143 li~----------------------------------------------------------------------------- 145 (272)
T cd06637 143 LLT----------------------------------------------------------------------------- 145 (272)
T ss_pred EEC-----------------------------------------------------------------------------
Confidence 886
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeee-----cCCCCCccceeeeeeeeE
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~ 305 (351)
....++|+|||++..... ......|++.|+|||.+. +..++.++|+||+||++|
T Consensus 146 ------------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~ 207 (272)
T cd06637 146 ------------------ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 207 (272)
T ss_pred ------------------CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHH
Confidence 234689999999865321 223467889999999986 335788999999999999
Q ss_pred eeccccccccccCC
Q psy2006 306 ELYLGITLMARKTK 319 (351)
Q Consensus 306 ~l~tG~~pf~~~~~ 319 (351)
++++|..||.....
T Consensus 208 el~~g~~p~~~~~~ 221 (272)
T cd06637 208 EMAEGAPPLCDMHP 221 (272)
T ss_pred HHHhCCCCccccCH
Confidence 99999999976543
No 145
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=4e-30 Score=234.60 Aligned_cols=188 Identities=21% Similarity=0.218 Sum_probs=159.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||+|+||.||+|++..+++.||+|++... ....+.+.+|+++++++.|++ |+++++.|...+..++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPY------IIGFYGAFFVENRISICTE 79 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCC------eeeEEEEEEECCEEEEEEe
Confidence 36799999999999999999999999999653 233456788999999999887 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|..+ ..+++..+..++.|++.+ ++|||+.|++|+|+++.|+.+.
T Consensus 80 ~~~~~~l~~~------~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dlkp~Nill~- 129 (279)
T cd06619 80 FMDGGSLDVY------RKIPEHVLGRIAVAVVKG-----------------------LTYLWSLKILHRDVKPSNMLVN- 129 (279)
T ss_pred cCCCCChHHh------hcCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeeCCCCHHHEEEC-
Confidence 99 7787643 245777777777777777 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (279)
T cd06619 130 -------------------------------------------------------------------------------- 129 (279)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||++.... .......|++.|+|||.+.+..++.++|+||+||++|++++|..||..
T Consensus 130 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 130 --------------TRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred --------------CCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 23468999999886532 233456789999999999988899999999999999999999999976
Q ss_pred cC
Q psy2006 317 KT 318 (351)
Q Consensus 317 ~~ 318 (351)
..
T Consensus 196 ~~ 197 (279)
T cd06619 196 IQ 197 (279)
T ss_pred hc
Confidence 43
No 146
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=3.3e-30 Score=236.46 Aligned_cols=193 Identities=23% Similarity=0.320 Sum_probs=167.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||.||++.+..+++.||+|++.... ...+.+.+|+++++++.|+| |+++++.+...++.|+||
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF------LVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCC------ccceeeEEEcCCeEEEEE
Confidence 67999999999999999999999999997532 23456788999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.... .+++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.
T Consensus 81 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~-----------------------l~~lH~~~i~H~dl~p~nili~ 135 (290)
T cd05580 81 EYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLA-----------------------LEYLHSLDIVYRDLKPENLLLD 135 (290)
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEecCCCCHHHEEEC
Confidence 999 999999998764 57888888888888888 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 136 ~------------------------------------------------------------------------------- 136 (290)
T cd05580 136 S------------------------------------------------------------------------------- 136 (290)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
.+.++|+|||++...........+++.|+|||.+.+...+.++|+||||+++++|++|..||..
T Consensus 137 ----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 137 ----------------DGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred ----------------CCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 3468999999987654445556788999999999888889999999999999999999999987
Q ss_pred cCCC
Q psy2006 317 KTKT 320 (351)
Q Consensus 317 ~~~~ 320 (351)
.+..
T Consensus 201 ~~~~ 204 (290)
T cd05580 201 DNPI 204 (290)
T ss_pred CCHH
Confidence 6643
No 147
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.6e-30 Score=245.88 Aligned_cols=185 Identities=21% Similarity=0.297 Sum_probs=157.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g 81 (351)
++||+|+||.||+|.+..+++.||+|+... .....|+.+++.++|+| |++++++|...++.|+|||++.
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNVNHPS------VIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhCCCCC------CcChhheEEeCCeeEEEEEccC
Confidence 679999999999999988999999998654 23456999999999887 9999999999999999999998
Q ss_pred CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCc
Q psy2006 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSA 161 (351)
Q Consensus 82 ~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s 161 (351)
++|.+++.... ..+++..+..++.|++.| |.|||++|++|||+|+.||.+.+
T Consensus 141 ~~l~~~l~~~~-~~~~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivHrDlkp~Nill~~---- 192 (357)
T PHA03209 141 SDLYTYLTKRS-RPLPIDQALIIEKQILEG-----------------------LRYLHAQRIIHRDVKTENIFIND---- 192 (357)
T ss_pred CcHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEECC----
Confidence 89999987654 367888888888888888 99999999999999999998762
Q ss_pred ccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhc
Q psy2006 162 TFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
T Consensus 193 -------------------------------------------------------------------------------- 192 (357)
T PHA03209 193 -------------------------------------------------------------------------------- 192 (357)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc-ccccc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI-TLMAR 316 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~-~pf~~ 316 (351)
...++|+|||.+..... ......||+.|+|||++.+..++.++|+||+||++|+++++. ++|..
T Consensus 193 -----------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~ 259 (357)
T PHA03209 193 -----------VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFED 259 (357)
T ss_pred -----------CCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccC
Confidence 34689999999865322 223467899999999999989999999999999999999754 44443
No 148
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=1.8e-30 Score=265.26 Aligned_cols=214 Identities=18% Similarity=0.234 Sum_probs=164.2
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~l 75 (351)
+++||.|+||+||+|.+..+++.||+|++... ......+..|+.+|+.|.|++ |++++++|... ..+||
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPN------IVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKN------IVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCC------cCeEEEEEEecCCCEEEE
Confidence 36799999999999999999999999999743 334566788999999999888 99999998654 47999
Q ss_pred EEecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-------cccc
Q psy2006 76 AFEIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-------KREV 145 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-------~i~h 145 (351)
||||+ +++|.++|.... ...+++..++.++.||+.| |.|||+. +|+|
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~A-----------------------LaYLHs~g~~~~~k~IVH 148 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHA-----------------------LAYCHNLKDGPNGERVLH 148 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHH-----------------------HHHHHhcccccccCCcee
Confidence 99999 899999997642 2357888888888888888 9999984 4999
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
|||||.||.|.+-+.. .......
T Consensus 149 RDLKPeNILL~s~~~~-lg~i~~~-------------------------------------------------------- 171 (1021)
T PTZ00266 149 RDLKPQNIFLSTGIRH-IGKITAQ-------------------------------------------------------- 171 (1021)
T ss_pred ccCcHHHeEeecCccc-ccccccc--------------------------------------------------------
Confidence 9999999988631000 0000000
Q ss_pred chhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeec--CCCCCccceeeee
Q psy2006 226 SSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIG 301 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG 301 (351)
.........+||+|||++..... ......||+.|+|||++.+ ..++.++||||||
T Consensus 172 ---------------------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG 230 (1021)
T PTZ00266 172 ---------------------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230 (1021)
T ss_pred ---------------------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence 00001234589999999865322 2244678999999999865 3478899999999
Q ss_pred eeeEeeccccccccccCCCc
Q psy2006 302 CIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 302 ~~l~~l~tG~~pf~~~~~~~ 321 (351)
|++|+|+||..||...+...
T Consensus 231 ~ILYELLTGk~PF~~~~~~~ 250 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKANNFS 250 (1021)
T ss_pred HHHHHHHHCCCCCCcCCcHH
Confidence 99999999999998765443
No 149
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=2.8e-30 Score=238.54 Aligned_cols=215 Identities=16% Similarity=0.190 Sum_probs=155.9
Q ss_pred ccccCcccceEEEEEEee----------------cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeee
Q psy2006 2 CSLNCVASNHVCTNVVYE----------------VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKM 63 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l 63 (351)
++||+|+||.||+|.+.. ++..||+|++... ......+.+|+++|..++|+| |+++
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~ 84 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPN------IIRL 84 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC------eeEE
Confidence 679999999999998632 3457999999753 233456789999999999877 9999
Q ss_pred eeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc
Q psy2006 64 LDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK 142 (351)
Q Consensus 64 ~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~ 142 (351)
++++...+..|+||||+ +++|.+++............... .........++...+..++.|++.||.|||+.|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDA------VPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccc------cccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999 89999998764311100000000 000001112333444445555555599999999
Q ss_pred ccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCC
Q psy2006 143 REVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222 (351)
Q Consensus 143 i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~ 222 (351)
++|||+|+.|+.+.+
T Consensus 159 ivH~dlkp~Nill~~----------------------------------------------------------------- 173 (304)
T cd05096 159 FVHRDLATRNCLVGE----------------------------------------------------------------- 173 (304)
T ss_pred ccccCcchhheEEcC-----------------------------------------------------------------
Confidence 999999999998762
Q ss_pred CCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccce
Q psy2006 223 KLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDV 297 (351)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di 297 (351)
...+||+|||++...... .....++..|+|||.+.+..++.++|+
T Consensus 174 ------------------------------~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 174 ------------------------------NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred ------------------------------CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 346899999988643211 123345678999999988889999999
Q ss_pred eeeeeeeEeecc--ccccccccCCCcee
Q psy2006 298 WSIGCIIFELYL--GITLMARKTKTKYF 323 (351)
Q Consensus 298 wslG~~l~~l~t--G~~pf~~~~~~~~~ 323 (351)
|||||++|++++ +..||...+..+.+
T Consensus 224 ~slG~~l~el~~~~~~~p~~~~~~~~~~ 251 (304)
T cd05096 224 WAFGVTLWEILMLCKEQPYGELTDEQVI 251 (304)
T ss_pred HHHHHHHHHHHHccCCCCCCcCCHHHHH
Confidence 999999999885 67888877655543
No 150
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.96 E-value=3.8e-30 Score=230.89 Aligned_cols=195 Identities=15% Similarity=0.250 Sum_probs=161.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||+|+||+||+|++..+++.||+|.+... ......+.+|+++++.++|+| |+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPN------IVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCC------cceEEEEEcCCCCeEEEEee
Confidence 5799999999999999999999999998643 233456889999999999887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.... ..+++..+..++.|++.+ |.|||+++++|+|+++.|+.+.+
T Consensus 75 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~i~H~dl~p~nil~~~- 129 (252)
T cd05084 75 VQGGDFLTFLRTEG-PRLKVKELIQMVENAAAG-----------------------MEYLESKHCIHRDLAARNCLVTE- 129 (252)
T ss_pred ccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccccccchheEEEcC-
Confidence 9 889999987654 357788888888888888 99999999999999999998761
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (252)
T cd05084 130 -------------------------------------------------------------------------------- 129 (252)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccccc-----cccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GIT 312 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~ 312 (351)
...++|+|||.+........ ....+..|+|||.+.+..++.++|+||+||++|++++ |..
T Consensus 130 --------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~ 195 (252)
T cd05084 130 --------------KNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAV 195 (252)
T ss_pred --------------CCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 34588999998754221111 1122356999999988888999999999999999997 999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||...+..+
T Consensus 196 p~~~~~~~~ 204 (252)
T cd05084 196 PYANLSNQQ 204 (252)
T ss_pred CccccCHHH
Confidence 997665543
No 151
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=3e-30 Score=240.95 Aligned_cols=195 Identities=14% Similarity=0.083 Sum_probs=155.7
Q ss_pred CccccCc--ccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCV--ASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+++||+| +|++||++.++.+++.||+|.+... ....+.+.+|+.+++.++|+| |++++++|..++..|+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpn------iv~~~~~~~~~~~~~l 76 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPN------IVPYRATFIADNELWV 76 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCC------eeeEEEEEEECCEEEE
Confidence 4689999 7899999999999999999999753 233456778999999999888 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ +++|.+++.......+++..++.++.|++.| |+|||+++++|||+|+.|+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~-----------------------L~~LH~~~iiH~dlkp~Nil 133 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKA-----------------------LDYIHHMGYVHRSVKASHIL 133 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEecCCCChhhEE
Confidence 99999 8999999976544457888888888888888 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.+-
T Consensus 134 ~~~~---------------------------------------------------------------------------- 137 (327)
T cd08227 134 ISVD---------------------------------------------------------------------------- 137 (327)
T ss_pred EecC----------------------------------------------------------------------------
Confidence 7631
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCccee----------ccccccccccceeeCceeeec--CCCCCccceeeeee
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFD----------DEHHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGC 302 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~----------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~ 302 (351)
..++++||+..... ........++..|+|||.+.+ ..++.++|+||+||
T Consensus 138 -------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~ 198 (327)
T cd08227 138 -------------------GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 198 (327)
T ss_pred -------------------CcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHH
Confidence 23344444322110 000112345678999999976 45789999999999
Q ss_pred eeEeeccccccccccCC
Q psy2006 303 IIFELYLGITLMARKTK 319 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~~ 319 (351)
+++++++|..||.....
T Consensus 199 il~el~~g~~pf~~~~~ 215 (327)
T cd08227 199 TACELANGHVPFKDMPA 215 (327)
T ss_pred HHHHHHHCCCCCCCcch
Confidence 99999999999976543
No 152
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=5.9e-30 Score=234.96 Aligned_cols=196 Identities=22% Similarity=0.294 Sum_probs=163.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+++||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.|+| |+++++.|..+++.|+||||
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPY------IVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCc------EeeeEEEEEeCCeEEEEEec
Confidence 468999999999999999999999999997542 34566788999999999887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|..++.+.. ..+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~dlkp~Nili~-- 144 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEA-----------------------LQYLHSMKIIHRDLKAGNVLLT-- 144 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHhcCCeeecCCCcceEEEc--
Confidence 9 888888876543 357788888888888887 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 145 -------------------------------------------------------------------------------- 144 (292)
T cd06644 145 -------------------------------------------------------------------------------- 144 (292)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeee-----cCCCCCccceeeeeeeeEeeccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.++|+|||++..... ......+++.|+|||.+. ...++.++|+|||||++|+|++|
T Consensus 145 -------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g 211 (292)
T cd06644 145 -------------LDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 211 (292)
T ss_pred -------------CCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcC
Confidence 235689999998764221 223456788999999985 34567889999999999999999
Q ss_pred cccccccCCCc
Q psy2006 311 ITLMARKTKTK 321 (351)
Q Consensus 311 ~~pf~~~~~~~ 321 (351)
..||...+..+
T Consensus 212 ~~p~~~~~~~~ 222 (292)
T cd06644 212 EPPHHELNPMR 222 (292)
T ss_pred CCCCccccHHH
Confidence 99998765443
No 153
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=2.1e-30 Score=238.76 Aligned_cols=193 Identities=21% Similarity=0.274 Sum_probs=163.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+.||.|+||.||+|++..+++.||+|.+.... ...+.+.+|+.+++.+.|+| |+++++.|....+.|+||||+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~------v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCC------EeeEEEEEEeCCEEEEeeccc
Confidence 57999999999999998899999999997532 33456788999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ |.|||++|++|+|+++.|+.+.+
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~a-----------------------L~~LH~~gi~H~dLkp~Nill~~-- 151 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQA-----------------------LEFLHSNQVIHRDIKSDNILLGM-- 151 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEEEcC--
Confidence 89999998653 46777777778877777 99999999999999999998861
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 152 -------------------------------------------------------------------------------- 151 (296)
T cd06654 152 -------------------------------------------------------------------------------- 151 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||.+..... ......+++.|+|||.+.+..++.++|+|||||++|++++|..||..
T Consensus 152 -------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~ 218 (296)
T cd06654 152 -------------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (296)
T ss_pred -------------CCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 24689999998764321 12345788999999999888889999999999999999999999987
Q ss_pred cCCCc
Q psy2006 317 KTKTK 321 (351)
Q Consensus 317 ~~~~~ 321 (351)
.+..+
T Consensus 219 ~~~~~ 223 (296)
T cd06654 219 ENPLR 223 (296)
T ss_pred CCHHH
Confidence 66543
No 154
>KOG0986|consensus
Probab=99.96 E-value=2.6e-31 Score=243.44 Aligned_cols=192 Identities=19% Similarity=0.278 Sum_probs=162.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
|.||.|+||.||-++.+.+|+.||+|.+.+... -..-+..|-++|++++++. ||.|--+|+..+.+|+||
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~F------iVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPF------IVSLAYAFETKDALCLVL 264 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCc------EEEEeeeecCCCceEEEE
Confidence 579999999999999999999999999976431 1234678999999998776 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
..| ||||.=.|-..+...+++..++ +|..+++.||++||+.+|+.||+||.||.|.
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~-----------------------FYAAEi~cGLehlH~~~iVYRDLKPeNILLD 321 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRAR-----------------------FYAAEIICGLEHLHRRRIVYRDLKPENILLD 321 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHH-----------------------HHHHHHHhhHHHHHhcceeeccCChhheeec
Confidence 999 9999877766554455555444 5555555559999999999999999999998
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
|
T Consensus 322 d------------------------------------------------------------------------------- 322 (591)
T KOG0986|consen 322 D------------------------------------------------------------------------------- 322 (591)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcce--eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
.++|+|+|+|++.- .+.+....+||..|||||++....|+.++|+||+||++|+|+.|..||
T Consensus 323 ----------------~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF 386 (591)
T KOG0986|consen 323 ----------------HGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF 386 (591)
T ss_pred ----------------CCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence 45799999999865 345566679999999999999988999999999999999999999999
Q ss_pred ccc
Q psy2006 315 ARK 317 (351)
Q Consensus 315 ~~~ 317 (351)
-.+
T Consensus 387 r~~ 389 (591)
T KOG0986|consen 387 RQR 389 (591)
T ss_pred hhh
Confidence 654
No 155
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96 E-value=2.9e-30 Score=235.74 Aligned_cols=195 Identities=22% Similarity=0.301 Sum_probs=162.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|+| |+++++++..+++.|+||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN------IVCLQDVLMQESRLYLIF 78 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCC------EeeeEEEEeeCCeEEEEE
Confidence 368999999999999998899999999996532 22356788999999999877 999999999999999999
Q ss_pred eccCCCHHHHHHhcCC-CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EILGLSVFDFLKENNY-LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~-~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+.++|.+++..... ..+++..++.++.|++.| |.|||+.+++|+|+++.|+.+.
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~i~H~dl~p~nil~~ 135 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQG-----------------------ILFCHSRRVLHRDLKPQNLLID 135 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeecCCCHHHEEEc
Confidence 9998899999876532 457788888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (285)
T cd07861 136 -------------------------------------------------------------------------------- 135 (285)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.++|+|||++...... .....+++.|+|||.+.+. .++.++|+|||||++++++||.+
T Consensus 136 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~ 200 (285)
T cd07861 136 ---------------NKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKP 200 (285)
T ss_pred ---------------CCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCC
Confidence 2346899999987643221 2234567899999988654 46889999999999999999999
Q ss_pred cccccCC
Q psy2006 313 LMARKTK 319 (351)
Q Consensus 313 pf~~~~~ 319 (351)
||.+.+.
T Consensus 201 ~~~~~~~ 207 (285)
T cd07861 201 LFHGDSE 207 (285)
T ss_pred CCCCCCH
Confidence 9987654
No 156
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=5.7e-30 Score=233.76 Aligned_cols=197 Identities=25% Similarity=0.322 Sum_probs=163.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||.||+|.+..++..+|+|.+... ....+.+.+|+.+++.+.|+| |+++++.|...+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN------IVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCC------eeeEEEEEeeCCEEEEEEEec
Confidence 5799999999999999889999999999753 334556788999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|..++.+.. .++++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.
T Consensus 85 ~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~-----------------------L~~LH~~~i~H~dlkp~nili~--- 137 (282)
T cd06643 85 AGGAVDAVMLELE-RPLTEPQIRVVCKQTLEA-----------------------LNYLHENKIIHRDLKAGNILFT--- 137 (282)
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCCcccEEEc---
Confidence 889988876543 357788888888888887 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (282)
T cd06643 138 -------------------------------------------------------------------------------- 137 (282)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeee-----cCCCCCccceeeeeeeeEeecccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++++|||++..... ......+++.|+|||.+. +..++.++|+||+||++|++++|.
T Consensus 138 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 205 (282)
T cd06643 138 ------------LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE 205 (282)
T ss_pred ------------cCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC
Confidence 235689999998754321 223456889999999884 345678999999999999999999
Q ss_pred ccccccCCCcee
Q psy2006 312 TLMARKTKTKYF 323 (351)
Q Consensus 312 ~pf~~~~~~~~~ 323 (351)
+||...+..+.+
T Consensus 206 ~p~~~~~~~~~~ 217 (282)
T cd06643 206 PPHHELNPMRVL 217 (282)
T ss_pred CCccccCHHHHH
Confidence 999877655443
No 157
>KOG0596|consensus
Probab=99.96 E-value=1.7e-30 Score=243.05 Aligned_cols=192 Identities=21% Similarity=0.321 Sum_probs=155.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||+|+.+.||++.. .+.+.||+|.+... ......+..|+..|.+|+ |+..||+|+||-..++.+||||
T Consensus 366 lk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-----g~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK-----GHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred HHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-----CCceEEEEeeeeccCceEEEEe
Confidence 47899999999999996 45667777776532 344567789999999997 3334999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+=..||.++++.... ..+.-.++.+..|++.+ +.+.|..||+|.|+||.|..++
T Consensus 440 E~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~a-----------------------V~~IH~~gIVHSDLKPANFLlV- 494 (677)
T KOG0596|consen 440 ECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLA-----------------------VKTIHQHGIVHSDLKPANFLLV- 494 (677)
T ss_pred ecccccHHHHHHhccC-CCchHHHHHHHHHHHHH-----------------------HHHHHHhceeecCCCcccEEEE-
Confidence 9999999999998863 33444666666666666 9999999999999999998887
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 495 -------------------------------------------------------------------------------- 494 (677)
T KOG0596|consen 495 -------------------------------------------------------------------------------- 494 (677)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecC-----------CCCCccceeeee
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILEL-----------GWAQPCDVWSIG 301 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwslG 301 (351)
.+.+||+|||.+..... ...+.+||+.||+||.+... .+++++||||||
T Consensus 495 ---------------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG 559 (677)
T KOG0596|consen 495 ---------------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG 559 (677)
T ss_pred ---------------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence 46789999998765221 23568999999999988732 257899999999
Q ss_pred eeeEeeccccccccccC
Q psy2006 302 CIIFELYLGITLMARKT 318 (351)
Q Consensus 302 ~~l~~l~tG~~pf~~~~ 318 (351)
|++|+|+.|++||...-
T Consensus 560 CILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 560 CILYQMVYGKTPFGQII 576 (677)
T ss_pred hHHHHHHhcCCchHHHH
Confidence 99999999999997643
No 158
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=4.6e-30 Score=244.29 Aligned_cols=218 Identities=20% Similarity=0.238 Sum_probs=163.9
Q ss_pred ccccCcccceEEEEEEe-----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++||.|+||+||+|.+. .++..||+|+++.. ....+.+.+|+++|+.+ .|+| |+++++++...++.
T Consensus 41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~Hpn------Iv~l~~~~~~~~~~ 114 (375)
T cd05104 41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHIN------IVNLLGACTVGGPT 114 (375)
T ss_pred heecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcc------eeeeeeeeccCCcc
Confidence 57999999999999753 35679999999743 23345678899999999 6766 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCC-C----chHH---HHHHHHHHH-----------------------------------
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLP-Y----SLDQ---VRHMSYQLI----------------------------------- 109 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~-~----~~~~---~~~~~~ql~----------------------------------- 109 (351)
++||||| +|+|.++++...... . .... .+.++.+..
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999 999999998753210 0 0000 000000000
Q ss_pred -------HhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCcc
Q psy2006 110 -------YAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPER 182 (351)
Q Consensus 110 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~ 182 (351)
...+.....+++..+..++.|++.||.|||+.+++|||+|+.|+.+.+
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~------------------------- 249 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH------------------------- 249 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC-------------------------
Confidence 001122345788888999999999999999999999999999998862
Q ss_pred ccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccC
Q psy2006 183 YMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFG 262 (351)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg 262 (351)
...+||+|||
T Consensus 250 ----------------------------------------------------------------------~~~~kl~DfG 259 (375)
T cd05104 250 ----------------------------------------------------------------------GRITKICDFG 259 (375)
T ss_pred ----------------------------------------------------------------------CCcEEEecCc
Confidence 2458899999
Q ss_pred Ccceecccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCCC
Q psy2006 263 SATFDDEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTKT 320 (351)
Q Consensus 263 ~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~~ 320 (351)
++....... ....++..|+|||.+.+..++.++|+|||||++|++++ |..||.+....
T Consensus 260 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~ 323 (375)
T cd05104 260 LARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD 323 (375)
T ss_pred cceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch
Confidence 886532211 12334567999999999899999999999999999997 99999876544
No 159
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=3.8e-30 Score=235.02 Aligned_cols=194 Identities=19% Similarity=0.270 Sum_probs=153.9
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
.||+|+||.||++.+..+++.||+|.+.+.. ........|..+++.+.+. .+.+|+.+++.|...+..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG---DCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC---CCCcEeEEEEEEecCCeEEEEEe
Confidence 4899999999999998899999999996532 1122334555555544321 11229999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.... .+++..++.++.|++.| |+|||+.+++|+|+|++|+.+.
T Consensus 78 ~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~a-----------------------l~~lH~~~ivH~dikp~Nil~~- 131 (279)
T cd05633 78 LMNGGDLHYHLSQHG--VFSEKEMRFYATEIILG-----------------------LEHMHNRFVVYRDLKPANILLD- 131 (279)
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcCCCCCCHHHEEEC-
Confidence 99 899999887654 57888888888888888 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 132 -------------------------------------------------------------------------------- 131 (279)
T cd05633 132 -------------------------------------------------------------------------------- 131 (279)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc-ccccccccceeeCceeee-cCCCCCccceeeeeeeeEeecccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-HHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++|+|||++..... ......|++.|+|||.+. +..++.++|+||+||+++++++|..||.
T Consensus 132 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 132 --------------EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred --------------CCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 234689999998764322 223356899999999886 4567899999999999999999999997
Q ss_pred ccCC
Q psy2006 316 RKTK 319 (351)
Q Consensus 316 ~~~~ 319 (351)
..+.
T Consensus 198 ~~~~ 201 (279)
T cd05633 198 QHKT 201 (279)
T ss_pred CCCC
Confidence 6543
No 160
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=5e-30 Score=230.78 Aligned_cols=197 Identities=17% Similarity=0.233 Sum_probs=162.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++.||+|+||.||+|.. ..+..+|+|.+.......+.+..|+++++.+.|+| |+++++++...+..|+||||+
T Consensus 9 ~~~lg~G~~~~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 9 MKELGSGQFGVVHLGKW-RAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPK------LVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred eeEecCCcCceEEEEEe-ccCceEEEEecccCCccHHHHHHHHHHHHHCCCCC------ceeEEEEEccCCCEEEEEEcC
Confidence 36799999999999986 45668999998765444567788999999999877 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.... ..+++..++.++.|++.+ |.|||+++++|+|++++|+.+.+
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~ni~i~~-- 135 (256)
T cd05114 82 ENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEG-----------------------MEYLERNSFIHRDLAARNCLVSS-- 135 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccccCcceEEEcC--
Confidence 899999987653 257778888888888887 99999999999999999998862
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (256)
T cd05114 136 -------------------------------------------------------------------------------- 135 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...++|+|||.+....... ....++..|+|||.+.+..++.++|+||+|+++|++++ |..||
T Consensus 136 -------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~ 202 (256)
T cd05114 136 -------------TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPF 202 (256)
T ss_pred -------------CCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCC
Confidence 3458999999876432111 12234567999999988889999999999999999999 99999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
...+..+.+
T Consensus 203 ~~~~~~~~~ 211 (256)
T cd05114 203 EKKSNYEVV 211 (256)
T ss_pred CCCCHHHHH
Confidence 887765544
No 161
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96 E-value=9.3e-30 Score=228.48 Aligned_cols=196 Identities=22% Similarity=0.271 Sum_probs=167.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.++|+| |+++++.+...+..|+|||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY------IIRYYESFLDKGKLNIVME 79 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCC------eehheeeeccCCEEEEEEE
Confidence 5799999999999999999999999998643 344567788999999999888 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.......+++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a-----------------------l~~lH~~~i~h~dl~~~nili~- 135 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG-----------------------LAHLHSKKILHRDIKSLNLFLD- 135 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCcceEEEe-
Confidence 99 8999999987644567788888888888887 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (256)
T cd08529 136 -------------------------------------------------------------------------------- 135 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......|++.|+|||.+.+..++.++|+|||||+++++++|..||
T Consensus 136 --------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 201 (256)
T cd08529 136 --------------AYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201 (256)
T ss_pred --------------CCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 235689999998765322 123456788999999998888999999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+..+
T Consensus 202 ~~~~~~~ 208 (256)
T cd08529 202 DANNQGA 208 (256)
T ss_pred CCCCHHH
Confidence 8776443
No 162
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.2e-30 Score=250.31 Aligned_cols=185 Identities=23% Similarity=0.301 Sum_probs=157.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g 81 (351)
++||.|+||.||+|.+..+++.||+|.... ....+|+++|++|+|+| |+++++++...+..|+|||++.
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~Hpn------Iv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPA------VLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCC------CCcEEEEEEECCEEEEEEEccC
Confidence 579999999999999999999999997542 34568999999999888 9999999999999999999998
Q ss_pred CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCc
Q psy2006 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSA 161 (351)
Q Consensus 82 ~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s 161 (351)
++|.+++.... ..+++..++.++.|++.| |.|||++|++|||+|+.||.+.
T Consensus 244 ~~L~~~l~~~~-~~l~~~~~~~i~~qi~~a-----------------------L~yLH~~gIvHrDLKP~NILl~----- 294 (461)
T PHA03211 244 SDLYTYLGARL-RPLGLAQVTAVARQLLSA-----------------------IDYIHGEGIIHRDIKTENVLVN----- 294 (461)
T ss_pred CCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEECcCCHHHEEEC-----
Confidence 89999987653 357888888888888888 9999999999999999999886
Q ss_pred ccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhc
Q psy2006 162 TFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
T Consensus 295 -------------------------------------------------------------------------------- 294 (461)
T PHA03211 295 -------------------------------------------------------------------------------- 294 (461)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||++...... .....||+.|+|||++.+..++.++|+|||||++|++++|..++..
T Consensus 295 ----------~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 295 ----------GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred ----------CCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 1346899999998653221 1235689999999999998999999999999999999998765543
No 163
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=7.5e-30 Score=230.93 Aligned_cols=195 Identities=22% Similarity=0.278 Sum_probs=162.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|++ |+++++++...+.+++||||
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~------ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCN------IVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCC------eeeeeEEEEeCCEEEEEEeC
Confidence 368999999999999998899999999997532 23345678999999999888 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.++++... .+++..+..++.|++.+ ++|||+.+++|+|+++.|+.+.+
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dl~p~nill~~- 141 (267)
T cd06646 88 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQG-----------------------LAYLHSKGKMHRDIKGANILLTD- 141 (267)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCCHHHEEECC-
Confidence 9 789999987654 57777788888888777 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 142 -------------------------------------------------------------------------------- 141 (267)
T cd06646 142 -------------------------------------------------------------------------------- 141 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeee---cCCCCCccceeeeeeeeEeeccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
...++|+|||++..... ......|++.|+|||.+. ...++.++|+||+||++|++++|..
T Consensus 142 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~ 207 (267)
T cd06646 142 --------------NGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP 207 (267)
T ss_pred --------------CCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 34589999999865322 123456788999999875 3446789999999999999999999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||...+..+
T Consensus 208 p~~~~~~~~ 216 (267)
T cd06646 208 PMFDLHPMR 216 (267)
T ss_pred Cccccchhh
Confidence 997655443
No 164
>KOG1026|consensus
Probab=99.96 E-value=1.3e-30 Score=255.53 Aligned_cols=220 Identities=19% Similarity=0.272 Sum_probs=175.2
Q ss_pred CccccCcccceEEEEEEee-----cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYE-----VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+++||+|+||+||+|+-.. ....||||.++.. ...+..+++|+.+|..|+|+| ||++++.+...+-+
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~n------IVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPN------IVRLLGVCREGDPL 564 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCC------eEEEEEEEccCCee
Confidence 4789999999999998543 4578999999754 335678999999999999988 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
|||+||| .|||.++++...... ....+.+..-.+++..+...+..|++.|++||-++.++|||+..-|
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a-----------~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN 633 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKA-----------DKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN 633 (774)
T ss_pred EEEEEecccccHHHHHHhhCCcc-----------ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence 9999999 999999998874210 0000111112346677777777777777999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.++
T Consensus 634 CLVg---------------------------------------------------------------------------- 637 (774)
T KOG1026|consen 634 CLVG---------------------------------------------------------------------------- 637 (774)
T ss_pred ceec----------------------------------------------------------------------------
Confidence 8887
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccc-----cccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
....|||+|||+++-.-.... ...-...||+||.|+.+.|+.++||||+||+|||+
T Consensus 638 -------------------e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEI 698 (774)
T KOG1026|consen 638 -------------------ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEI 698 (774)
T ss_pred -------------------cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhh
Confidence 246799999999875222111 22234689999999999999999999999999999
Q ss_pred cc-ccccccccCCCceee---ecccCCccc
Q psy2006 308 YL-GITLMARKTKTKYFY---HGKLDWDEK 333 (351)
Q Consensus 308 ~t-G~~pf~~~~~~~~~~---~~~~~~~~~ 333 (351)
.+ |.-|+.+.+.+|++. +|.+ |++.
T Consensus 699 FsyG~QPy~glSn~EVIe~i~~g~l-L~~P 727 (774)
T KOG1026|consen 699 FSYGKQPYYGLSNQEVIECIRAGQL-LSCP 727 (774)
T ss_pred hccccCcccccchHHHHHHHHcCCc-ccCC
Confidence 96 999999999999874 5666 4443
No 165
>KOG1989|consensus
Probab=99.96 E-value=2.6e-30 Score=254.40 Aligned_cols=209 Identities=22% Similarity=0.257 Sum_probs=167.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCC-------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHG-------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~-------~ 72 (351)
+-|.+|+|+.||+|.+...+..||+|.+-.. +..-+.+.+||.+|+.|+ |+| ||.++|...... .
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~n------IV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKN------IVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCc------eeeEeccccccccCCCceeE
Confidence 4588999999999999888899999998643 344567889999999997 444 999999433222 7
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc--ccccccC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK--REVRRVR 149 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~d~k 149 (351)
+.|.|||| ||+|-|+|..+-..+|.|..|.+|+.++++| +.+||... ++|||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~A-----------------------Va~mH~~~pPiIHRDLK 173 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEA-----------------------VAAMHYLKPPIIHRDLK 173 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHH-----------------------HHHHhcCCCccchhhhh
Confidence 89999999 7999999998766679999999999999999 99999887 9999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
-+|++|.
T Consensus 174 iENvLls------------------------------------------------------------------------- 180 (738)
T KOG1989|consen 174 IENVLLS------------------------------------------------------------------------- 180 (738)
T ss_pred hhheEEc-------------------------------------------------------------------------
Confidence 9999988
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceecccc------------ccccccceeeCceeee---cCCCCCc
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------------STIVSTRHYRAPEVIL---ELGWAQP 294 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------------~~~~gt~~y~aPE~~~---~~~~~~~ 294 (351)
..+..||||||.+....... -...-|+-|++||.+. +.+.+.|
T Consensus 181 ----------------------~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eK 238 (738)
T KOG1989|consen 181 ----------------------ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEK 238 (738)
T ss_pred ----------------------CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcch
Confidence 24578999999876421111 1123479999999774 5678999
Q ss_pred cceeeeeeeeEeeccccccccccCCCceeeecccCCccccc
Q psy2006 295 CDVWSIGCIIFELYLGITLMARKTKTKYFYHGKLDWDEKGT 335 (351)
Q Consensus 295 ~DiwslG~~l~~l~tG~~pf~~~~~~~~~~~~~~~~~~~~~ 335 (351)
+|||+|||+||-|+....||.....- .+.+|.+.++..++
T Consensus 239 sDIWALGclLYkLCy~t~PFe~sg~l-aIlng~Y~~P~~p~ 278 (738)
T KOG1989|consen 239 SDIWALGCLLYKLCYFTTPFEESGKL-AILNGNYSFPPFPN 278 (738)
T ss_pred hHHHHHHHHHHHHHHhCCCcCcCcce-eEEeccccCCCCcc
Confidence 99999999999999999999765433 34566776666544
No 166
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=4.7e-30 Score=235.28 Aligned_cols=192 Identities=23% Similarity=0.360 Sum_probs=161.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||.|+||+||+|.++.+++.||+|.+.... .......+|+.+++.++|+| |+++++++...++.|+||||
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHAN------IVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcc------eeeEEEEEecCCeEEEEEec
Confidence 57999999999999998899999999997532 22345678999999999887 99999999999999999999
Q ss_pred cCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 80 ~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
++++|.+++.+.. ..+++..++.++.|++.| |.|||+++++|+|+++.|+.+.
T Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~a-----------------------l~~lH~~~i~H~dl~p~nil~~--- 137 (291)
T cd07844 85 LDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRG-----------------------LAYCHQRRVLHRDLKPQNLLIS--- 137 (291)
T ss_pred CCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecccCCHHHEEEc---
Confidence 9889999988764 267888888888888888 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (291)
T cd07844 138 -------------------------------------------------------------------------------- 137 (291)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.++|+|||.+..... ......+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||.
T Consensus 138 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 138 ------------ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred ------------CCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 234689999998764321 1122346788999999876 457889999999999999999999997
Q ss_pred ccC
Q psy2006 316 RKT 318 (351)
Q Consensus 316 ~~~ 318 (351)
+.+
T Consensus 206 ~~~ 208 (291)
T cd07844 206 GST 208 (291)
T ss_pred CCc
Confidence 655
No 167
>KOG0579|consensus
Probab=99.96 E-value=2.7e-31 Score=251.45 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=168.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
..||.|+||.||+|.++.++-..|.|++... ...-+...-||.||....|++ |+.|++.|-..+.+||..|||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~------ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPV------IVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChH------HHHHHHHHhccCceEEEEeec
Confidence 4689999999999999999999999999643 333456778999999998777 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
||-....|-..+ ..+.+++++.+++|++.+ |.|||+++|+|||+|.|||.+.
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldA-----------------------Ln~LHs~~iIHRDLKAGNiL~T--- 164 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDA-----------------------LNWLHSQNIIHRDLKAGNILLT--- 164 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHH-----------------------HHHHhhcchhhhhccccceEEE---
Confidence 677777766665 467777777777777777 9999999999999999999987
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 165 -------------------------------------------------------------------------------- 164 (1187)
T KOG0579|consen 165 -------------------------------------------------------------------------------- 164 (1187)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeee-----cCCCCCccceeeeeeeeEeecccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.++|+|||.+-... ....+++|||.|||||++. ..+|..++||||||++|.+|+.+.
T Consensus 165 ------------ldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiE 232 (1187)
T KOG0579|consen 165 ------------LDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIE 232 (1187)
T ss_pred ------------ecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccC
Confidence 35789999999875432 3446799999999999876 578999999999999999999999
Q ss_pred ccccccCCCceee
Q psy2006 312 TLMARKTKTKYFY 324 (351)
Q Consensus 312 ~pf~~~~~~~~~~ 324 (351)
+|-..-+.+-++.
T Consensus 233 PPHhelnpMRVll 245 (1187)
T KOG0579|consen 233 PPHHELNPMRVLL 245 (1187)
T ss_pred CCccccchHHHHH
Confidence 9998888777664
No 168
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=9.3e-30 Score=230.31 Aligned_cols=193 Identities=21% Similarity=0.279 Sum_probs=161.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.++|+| |+++++.+...+..++||||+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~------ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN------IVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCC------eeeEEEEEEeCCEEEEEEecc
Confidence 57999999999999998999999999997542 22345678999999999888 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++...+ .+++..+..++.|++.+ ++|||+.|++|+|+++.|+.+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dlkp~nili~--- 140 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQG-----------------------LYYLHSKGKMHRDIKGANILLT--- 140 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEEC---
Confidence 789999987764 57788888888888877 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 141 -------------------------------------------------------------------------------- 140 (267)
T cd06645 141 -------------------------------------------------------------------------------- 140 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeee---cCCCCCccceeeeeeeeEeecccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||++..... ......|++.|+|||.+. ...++.++|+||+||++|++++|..|
T Consensus 141 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p 208 (267)
T cd06645 141 ------------DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred ------------CCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence 234689999998764322 223457889999999874 44578899999999999999999999
Q ss_pred ccccCCC
Q psy2006 314 MARKTKT 320 (351)
Q Consensus 314 f~~~~~~ 320 (351)
|......
T Consensus 209 ~~~~~~~ 215 (267)
T cd06645 209 MFDLHPM 215 (267)
T ss_pred cccccch
Confidence 9765443
No 169
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96 E-value=2.4e-30 Score=232.67 Aligned_cols=190 Identities=29% Similarity=0.446 Sum_probs=163.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhH---HHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYRE---AARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~---~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||+|+||+||++++..+++.||+|++........ ...+|+.+++++.|++ |+++++++......++|||
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~------i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPN------IVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTT------BCHEEEEEEESSEEEEEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccc------ccccccccccccccccccc
Confidence 679999999999999999999999999987543322 2345999999998877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
++ +++|.+++.... .+++..+..++.|++.+ |++||+.+++|+|+|+.||.+.
T Consensus 79 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------L~~Lh~~~i~H~dikp~NIl~~- 132 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNK--PLSEEEILKIAYQILEA-----------------------LAYLHSKGIVHRDIKPENILLD- 132 (260)
T ss_dssp EETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHH-----------------------HHHHHHTTEEESSBSGGGEEES-
T ss_pred ccccccccccccccc--ccccccccccccccccc-----------------------cccccccccccccccccccccc-
Confidence 99 569999998443 57788888888888887 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 133 -------------------------------------------------------------------------------- 132 (260)
T PF00069_consen 133 -------------------------------------------------------------------------------- 132 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeee-cCCCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
..+.++|+|||.+.. .........+++.|+|||.+. +..++.++|+||+|+++++|++|..|
T Consensus 133 --------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p 198 (260)
T PF00069_consen 133 --------------ENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLP 198 (260)
T ss_dssp --------------TTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred --------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 245689999999864 233445677899999999987 67789999999999999999999999
Q ss_pred cccc
Q psy2006 314 MARK 317 (351)
Q Consensus 314 f~~~ 317 (351)
|...
T Consensus 199 ~~~~ 202 (260)
T PF00069_consen 199 FEES 202 (260)
T ss_dssp STTS
T ss_pred cccc
Confidence 9877
No 170
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=9.9e-30 Score=258.07 Aligned_cols=151 Identities=17% Similarity=0.199 Sum_probs=127.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||.|+||+||+|.+..+++.||||++.... .....+..|+.++..++|++ |+++++.+...+++|||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~------Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPF------IVHLYYSLQSANNVYLV 82 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCC------cCeEEEEEEECCEEEEE
Confidence 368999999999999999899999999997532 22356788999999999887 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC---
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD--- 152 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n--- 152 (351)
|||+ +++|.+++.... .+++..++.++.||+.| |+|||+.+|+|||+|+.|
T Consensus 83 mEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~a-----------------------L~yLH~~gIiHrDLKP~NILl 137 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALA-----------------------LDYLHRHGIIHRDLKPDNMLI 137 (669)
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEeCCccHHHEEE
Confidence 9999 999999998764 57788888888888888 999999999999999876
Q ss_pred -----eEEeecCCcccCCC---CcccccCCCCccCCcc
Q psy2006 153 -----IRLIDFGSATFDDE---HHSTIVSTRHYRAPER 182 (351)
Q Consensus 153 -----i~l~Dfg~s~~~~~---~~~~~~~~~~~~~pe~ 182 (351)
++|+|||+++.... ......+|+.|.+||.
T Consensus 138 ~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~ 175 (669)
T cd05610 138 SNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKN 175 (669)
T ss_pred cCCCCEEEEeCCCCccccCCcccccccccCccccCccc
Confidence 48899999976322 3345678888888873
No 171
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=7.5e-30 Score=232.39 Aligned_cols=198 Identities=18% Similarity=0.211 Sum_probs=159.0
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||+|+||.||+|.+.. +++.||+|+++.... ..+.+.+|+++|+.+.|++ |+++++++....+.|
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~ 84 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN------IVKFYGVCTEGDPPI 84 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCC------chheeeEEecCCCeE
Confidence 679999999999998753 468999999975422 3467889999999999877 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCC------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
+||||+ +++|.+++...+. ..+++..+..++.|++.+ +.++|++
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~-----------------------l~~lH~~ 141 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASG-----------------------MVYLASQ 141 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHH-----------------------HHHHhhC
Confidence 999999 9999999987532 224444555555555555 9999999
Q ss_pred cccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
|++|+|+++.|+.+.
T Consensus 142 ~i~h~dlkp~nili~----------------------------------------------------------------- 156 (280)
T cd05049 142 HFVHRDLATRNCLVG----------------------------------------------------------------- 156 (280)
T ss_pred CeeccccccceEEEc-----------------------------------------------------------------
Confidence 999999999998876
Q ss_pred CCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccc
Q psy2006 222 DKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCD 296 (351)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~D 296 (351)
....++|+|||++..... ......+++.|+|||.+.+..++.++|
T Consensus 157 ------------------------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 206 (280)
T cd05049 157 ------------------------------YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 206 (280)
T ss_pred ------------------------------CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhh
Confidence 235689999998764211 112334567899999999889999999
Q ss_pred eeeeeeeeEeecc-ccccccccCCCcee
Q psy2006 297 VWSIGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 297 iwslG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+|||||++|++++ |..||...+..+..
T Consensus 207 i~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 207 VWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999998 99999877655543
No 172
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96 E-value=1.4e-29 Score=228.31 Aligned_cols=195 Identities=22% Similarity=0.255 Sum_probs=163.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+++++++.|+| |+++++++..++..++
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHER------IVQYYGCLRDDETLSI 81 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCC------eeeeEEEEccCCeEEE
Confidence 57999999999999998899999999986431 12345778999999999888 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|+||+ +++|.+++.... .+++..++.++.|++.+ +.|||+.|++|+|+++.|+.
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~H~dl~p~nil 136 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEG-----------------------VEYLHSNMIVHRDIKGANIL 136 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEE
Confidence 99999 889999988764 47778888888888877 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 137 v~------------------------------------------------------------------------------ 138 (263)
T cd06625 137 RD------------------------------------------------------------------------------ 138 (263)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
....++|+|||.+...... .....++..|+|||.+.+..++.++|+||+||++|+++
T Consensus 139 -----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 201 (263)
T cd06625 139 -----------------SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEML 201 (263)
T ss_pred -----------------CCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHH
Confidence 1346899999987642211 12345778999999999888999999999999999999
Q ss_pred cccccccccCCCce
Q psy2006 309 LGITLMARKTKTKY 322 (351)
Q Consensus 309 tG~~pf~~~~~~~~ 322 (351)
+|..||...+..+.
T Consensus 202 ~g~~p~~~~~~~~~ 215 (263)
T cd06625 202 TEKPPWAEFEAMAA 215 (263)
T ss_pred hCCCCccccchHHH
Confidence 99999977654443
No 173
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=1.4e-29 Score=227.69 Aligned_cols=199 Identities=23% Similarity=0.285 Sum_probs=169.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++.||.|+||.||.+++..+++.+|+|.+... ......+.+|++++++++|+| |++++++|...+.+++||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN------IIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCC------eeEEEeEEecCCeEEEEE
Confidence 46899999999999999999999999998643 333456789999999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.+.....+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~dl~p~ni~~~ 135 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSA-----------------------VSYIHKAGILHRDIKTLNIFLT 135 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccccCCChHhEEEe
Confidence 999 8999999987644467888888888888888 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 136 ~------------------------------------------------------------------------------- 136 (256)
T cd08221 136 K------------------------------------------------------------------------------- 136 (256)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...+||+|||.+..... ......+++.|+|||.+.+..++.++|+||+||+++++++|..|
T Consensus 137 ----------------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~ 200 (256)
T cd08221 137 ----------------AGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRT 200 (256)
T ss_pred ----------------CCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCC
Confidence 34689999998865322 22446788999999999888888999999999999999999999
Q ss_pred ccccCCCcee
Q psy2006 314 MARKTKTKYF 323 (351)
Q Consensus 314 f~~~~~~~~~ 323 (351)
|...+..+.+
T Consensus 201 ~~~~~~~~~~ 210 (256)
T cd08221 201 FDATNPLNLV 210 (256)
T ss_pred CCCCCHHHHH
Confidence 9887655543
No 174
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=9.2e-30 Score=232.30 Aligned_cols=213 Identities=18% Similarity=0.240 Sum_probs=159.0
Q ss_pred CccccCcccceEEEEEEeecC-----cEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVD-----SVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++.||+|+||.||+|.+...+ +.||+|.+... ......+.+|+.+++.++|++ |+++++++...+..
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~------i~~~~~~~~~~~~~ 83 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPN------IVCLLGVCTKEQPT 83 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcc------cceEEEEEcCCCce
Confidence 468999999999999976544 78999999643 233456788999999999877 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
|++|||+ +++|.+++........+. .. .........+++..+..++.|++.||.|||+++++|+|+|+.|
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~--~~-------~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N 154 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVG--AE-------SGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN 154 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccc--cc-------cccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccce
Confidence 9999999 899999998753210000 00 0000000123344444444444455999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 155 il~~~--------------------------------------------------------------------------- 159 (283)
T cd05048 155 CLVGE--------------------------------------------------------------------------- 159 (283)
T ss_pred EEEcC---------------------------------------------------------------------------
Confidence 98862
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
...++|+|||++..... ......+++.|+|||.+.+..++.++|+|||||++|++
T Consensus 160 --------------------~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el 219 (283)
T cd05048 160 --------------------GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219 (283)
T ss_pred --------------------CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHH
Confidence 34689999998864211 12234567889999999888899999999999999999
Q ss_pred cc-ccccccccCCCcee
Q psy2006 308 YL-GITLMARKTKTKYF 323 (351)
Q Consensus 308 ~t-G~~pf~~~~~~~~~ 323 (351)
++ |..||.+.+..+++
T Consensus 220 ~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 220 FSYGLQPYYGFSNQEVI 236 (283)
T ss_pred HcCCCCCCCCCCHHHHH
Confidence 97 99999887766554
No 175
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=5.5e-30 Score=233.55 Aligned_cols=195 Identities=23% Similarity=0.280 Sum_probs=163.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.++|++ |+++++.+..++..|+||||+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN------IVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCc------eeEEEEEEecCCeEEEEeecc
Confidence 5799999999999999889999999999753 233456788999999999877 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.... ..+++..++.++.|++.+ |.|||+++++|+|+++.|+.+.
T Consensus 85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~-----------------------l~~lh~~~i~h~dl~p~nili~--- 137 (280)
T cd06611 85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEA-----------------------LNFLHSHKVIHRDLKAGNILLT--- 137 (280)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCChhhEEEC---
Confidence 889999987654 357888888888888888 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (280)
T cd06611 138 -------------------------------------------------------------------------------- 137 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeee-----cCCCCCccceeeeeeeeEeecccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++|+|||.+.... .......+++.|++||.+. ..+++.++|+||+||++|++++|.
T Consensus 138 ------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~ 205 (280)
T cd06611 138 ------------LDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205 (280)
T ss_pred ------------CCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCC
Confidence 23468999999875422 1223456888999999875 345678999999999999999999
Q ss_pred ccccccCCCc
Q psy2006 312 TLMARKTKTK 321 (351)
Q Consensus 312 ~pf~~~~~~~ 321 (351)
.||...+..+
T Consensus 206 ~p~~~~~~~~ 215 (280)
T cd06611 206 PPHHELNPMR 215 (280)
T ss_pred CCcccCCHHH
Confidence 9998766544
No 176
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=1.8e-29 Score=226.95 Aligned_cols=197 Identities=20% Similarity=0.252 Sum_probs=165.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC-CeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH-GHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~-~~~~lV 76 (351)
++.||.|+||.||++.+..+++.||+|.+.... ...+...+|+++++.++|++ |+++.+.+... ..+|+|
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPN------IVAYRESWEGEDGLLYIV 78 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCC------eeeeeeeecCCCCEEEEE
Confidence 368999999999999998899999999996532 23456788999999999877 99999988744 478999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.......+++..++.++.|++.+ +.++|+.|++|+|+++.|+.+
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~H~di~p~nil~ 135 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA-----------------------LQYLHEKHILHRDLKTQNVFL 135 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCchhEEE
Confidence 9999 8899999987654568888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (257)
T cd08223 136 T------------------------------------------------------------------------------- 136 (257)
T ss_pred e-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||++..... ......+++.|+|||.+.+..++.++|+||+||+++++++|..
T Consensus 137 ----------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 200 (257)
T cd08223 137 ----------------RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH 200 (257)
T ss_pred ----------------cCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCC
Confidence 234689999998865322 2234567889999999988888999999999999999999999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||...+...
T Consensus 201 ~~~~~~~~~ 209 (257)
T cd08223 201 AFNAKDMNS 209 (257)
T ss_pred CCCCCCHHH
Confidence 998766444
No 177
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=1.1e-29 Score=243.21 Aligned_cols=217 Identities=18% Similarity=0.225 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeec-----CcEEEEEEecch--hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-----DSVVALKIIKNV--EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++||.|+||+||+|.+... +..||+|++... ....+.+.+|+++|+++. |+| |+++++++...+..
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~Hpn------Iv~l~~~~~~~~~~ 116 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLN------IVNLLGACTKSGPI 116 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCC------eeeEEEEEccCCce
Confidence 6799999999999997543 347999999643 233457889999999996 766 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCC---CchHH-------------------------------------------------
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLP---YSLDQ------------------------------------------------- 100 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~---~~~~~------------------------------------------------- 100 (351)
||||||| +|+|.+++....... .++..
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 9999999 999999997642100 00000
Q ss_pred ---------------------HHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 101 ---------------------VRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 101 ---------------------~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
...-..+++ ..+....+++..+..++.|++.||+|||+.+++|+|+|+.|+.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~-- 272 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLL--SDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ-- 272 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHH--HhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC--
Confidence 000000111 1122235788888999999999999999999999999999998862
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 273 -------------------------------------------------------------------------------- 272 (400)
T cd05105 273 -------------------------------------------------------------------------------- 272 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITL 313 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~p 313 (351)
...+||+|||++..... ......+++.|+|||.+.+..++.++|+|||||++|++++ |..|
T Consensus 273 -------------~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P 339 (400)
T cd05105 273 -------------GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTP 339 (400)
T ss_pred -------------CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 34589999998865321 1123446678999999988889999999999999999996 9999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|......+
T Consensus 340 ~~~~~~~~ 347 (400)
T cd05105 340 YPGMIVDS 347 (400)
T ss_pred CcccchhH
Confidence 98765443
No 178
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=9.3e-30 Score=234.50 Aligned_cols=193 Identities=22% Similarity=0.283 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|+| |+++++.|..+++.|+||||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCC------EeeEEEEEecCCEEEEeeccc
Confidence 67999999999999998999999999997532 33456788999999999888 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~-----------------------L~~LH~~~i~H~dL~p~Nili~--- 149 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQA-----------------------LDFLHSNQVIHRDIKSDNILLG--- 149 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEEEC---
Confidence 89999998653 36777788888888777 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 150 -------------------------------------------------------------------------------- 149 (297)
T cd06656 150 -------------------------------------------------------------------------------- 149 (297)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||.+...... .....+++.|++||.+.+..++.++|+||+||++|++++|..||..
T Consensus 150 ------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~ 217 (297)
T cd06656 150 ------------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (297)
T ss_pred ------------CCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1346899999987653221 2345678899999999888889999999999999999999999987
Q ss_pred cCCCc
Q psy2006 317 KTKTK 321 (351)
Q Consensus 317 ~~~~~ 321 (351)
.+...
T Consensus 218 ~~~~~ 222 (297)
T cd06656 218 ENPLR 222 (297)
T ss_pred CCcch
Confidence 66543
No 179
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=9.8e-30 Score=232.09 Aligned_cols=190 Identities=18% Similarity=0.240 Sum_probs=153.1
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHh---CCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKI---GEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l---~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
.||+|+||+||+|.+..+++.||+|++.... ........|..+++.+ .|++ |+.+++.|...++.|+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~~~~~~~ 74 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF------IVCMSYAFHTPDKLSF 74 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCc------EeeeeeeeecCCEEEE
Confidence 4899999999999998899999999996532 1112234454444444 3344 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ |++|.+++.... .+++..++.++.|++.+ +.|||+.+++|+|+++.|+.
T Consensus 75 v~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~di~p~nil 129 (278)
T cd05606 75 ILDLMNGGDLHYHLSQHG--VFSEAEMRFYAAEIILG-----------------------LEHMHNRFVVYRDLKPANIL 129 (278)
T ss_pred EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEEcCCCCHHHEE
Confidence 99999 899999887654 57888888888888888 99999999999999999987
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 130 i~------------------------------------------------------------------------------ 131 (278)
T cd05606 130 LD------------------------------------------------------------------------------ 131 (278)
T ss_pred EC------------------------------------------------------------------------------
Confidence 75
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||++.... .......|+..|+|||.+.+. .++.++|+||+||+++++++|..
T Consensus 132 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~ 194 (278)
T cd05606 132 -----------------EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 194 (278)
T ss_pred -----------------CCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCC
Confidence 13468999999876432 222345788999999998754 67899999999999999999999
Q ss_pred cccccC
Q psy2006 313 LMARKT 318 (351)
Q Consensus 313 pf~~~~ 318 (351)
||....
T Consensus 195 p~~~~~ 200 (278)
T cd05606 195 PFRQHK 200 (278)
T ss_pred CCCCCC
Confidence 998764
No 180
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=7.8e-30 Score=236.77 Aligned_cols=223 Identities=19% Similarity=0.238 Sum_probs=162.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||.|+||+||+|.+..+++.||+|.+.... ...+.+..|+++++.++|++ |+++++.+....+.|+|
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPF------LPTLYASFQTETYLCLV 79 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCC------chhheeeeecCCEEEEE
Confidence 367999999999999998899999999997542 23456788999999999877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe--
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI-- 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni-- 153 (351)
|||+ +++|.+++.......+++..++.++.|++.+ |.|||+.|++|+|+|+.|+
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dlkp~Nili 136 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA-----------------------LEYLHLLGIVYRDLKPENILL 136 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCChHHeEE
Confidence 9999 8899999987655578888888888888888 9999999999999998876
Q ss_pred ------EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ------RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ------~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+|||++.......... ....... +..
T Consensus 137 ~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~--------------------------~~~-------------- 170 (316)
T cd05574 137 HESGHIMLSDFDLSKQSDVEPPPV------SKALRKG--------------------------SRR-------------- 170 (316)
T ss_pred cCCCCEEEeecchhhccccccccc------ccccccc--------------------------ccc--------------
Confidence 455666654321110000 0000000 000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
.. .. ......+.+ ..........|+..|+|||.+.+..++.++|+|||||++|++
T Consensus 171 ----~~-------------~~---~~~~~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l 225 (316)
T cd05574 171 ----SS-------------VN---SIPSETFSE-----EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEM 225 (316)
T ss_pred ----cc-------------cc---ccchhhhcc-----cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 00 00 000000000 011122345788999999999888889999999999999999
Q ss_pred ccccccccccCCCcee
Q psy2006 308 YLGITLMARKTKTKYF 323 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~ 323 (351)
++|..||.+.+..+.+
T Consensus 226 ~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 226 LYGTTPFKGSNRDETF 241 (316)
T ss_pred hhCCCCCCCCchHHHH
Confidence 9999999877765544
No 181
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.6e-29 Score=230.81 Aligned_cols=196 Identities=20% Similarity=0.303 Sum_probs=161.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEee------CCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDY------HGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~------~~~~~ 74 (351)
+.||.|+||.||+|.+..+++.||+|++.........+..|+.+++++ .|+| |++++++|.. ..++|
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~------i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRN------IATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCc------EEEEeeehhcccccCCCCEEE
Confidence 579999999999999999999999999976555556778899999998 4666 9999999863 45899
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+||||+ +++|.+++.......+++..+..++.|++.+ +.|||+.+++|+|+++.|+
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~LH~~~ivH~dl~~~ni 152 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG-----------------------LAHLHAHKVIHRDIKGQNV 152 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHE
Confidence 999999 7899999987655567777777778888777 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 153 li~~---------------------------------------------------------------------------- 156 (282)
T cd06636 153 LLTE---------------------------------------------------------------------------- 156 (282)
T ss_pred EECC----------------------------------------------------------------------------
Confidence 8862
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeee-----cCCCCCccceeeeeeeeE
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVIL-----ELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~~l~ 305 (351)
...++|+|||++.... .......|++.|+|||.+. +..++.++|+|||||++|
T Consensus 157 -------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~ 217 (282)
T cd06636 157 -------------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAI 217 (282)
T ss_pred -------------------CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHH
Confidence 3458999999876432 1223467889999999876 345788999999999999
Q ss_pred eeccccccccccCCCc
Q psy2006 306 ELYLGITLMARKTKTK 321 (351)
Q Consensus 306 ~l~tG~~pf~~~~~~~ 321 (351)
++++|..||......+
T Consensus 218 el~~g~~p~~~~~~~~ 233 (282)
T cd06636 218 EMAEGAPPLCDMHPMR 233 (282)
T ss_pred HHHhCCCCccccCHHh
Confidence 9999999997765443
No 182
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.96 E-value=6.2e-30 Score=230.59 Aligned_cols=198 Identities=19% Similarity=0.262 Sum_probs=166.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh-hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK-YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+++||.|+||+||+|.+.. ++.+|+|++..... ....+.+|+++++.++|+| |+++++++...+..++||||
T Consensus 11 ~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKH------LISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred hhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcc------hhheeeeEecCCCeEEEEee
Confidence 3689999999999999866 89999999986533 4567788999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.......+++..+..++.|++.| +.|||++|++|+|+++.|+.+.+
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~a-----------------------l~~lH~~~i~h~dl~~~nilv~~- 139 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEG-----------------------MAYLEEQNSIHRDLAARNILVGE- 139 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccccCcceEEEcC-
Confidence 9 8899999987655567788888888888888 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 140 -------------------------------------------------------------------------------- 139 (261)
T cd05148 140 -------------------------------------------------------------------------------- 139 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecccc---ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...++|+|||.+....... ....++..|++||.+.+..++.++|+|||||+++++++ |..||
T Consensus 140 --------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~ 205 (261)
T cd05148 140 --------------DLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY 205 (261)
T ss_pred --------------CceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 3468999999886532211 22345668999999988888999999999999999998 89999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
.+.+..+.+
T Consensus 206 ~~~~~~~~~ 214 (261)
T cd05148 206 PGMNNHEVY 214 (261)
T ss_pred CcCCHHHHH
Confidence 887766554
No 183
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96 E-value=1.1e-29 Score=229.75 Aligned_cols=197 Identities=21% Similarity=0.234 Sum_probs=160.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
.++||+|+||+||+|.+..+ ..||+|++.......+.+.+|+++++.++|++ |+++++.+. ....++||||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK------LVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred eeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCC------cceEEEEEC-CCCcEEEEEcC
Confidence 36899999999999987544 56999999865444567789999999998877 999998875 45689999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.......+++..+..++.|++.+ |.|+|+.+++|+|+++.|+.+.+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------L~~lH~~~i~H~dl~p~Nill~~-- 137 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----------------------MAYVERMNYVHRDLRAANILVGE-- 137 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccccCcccEEEcC--
Confidence 8899999987544457788888888888888 99999999999999999998762
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (262)
T cd05071 138 -------------------------------------------------------------------------------- 137 (262)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...++|+|||.+....... ....++..|+|||.+.+..++.++|+||+||++|+++| |..||
T Consensus 138 -------------~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~ 204 (262)
T cd05071 138 -------------NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 204 (262)
T ss_pred -------------CCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 3468999999886532211 12345568999999988889999999999999999999 89999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
.+.+..+.+
T Consensus 205 ~~~~~~~~~ 213 (262)
T cd05071 205 PGMVNREVL 213 (262)
T ss_pred CCCChHHHH
Confidence 877655543
No 184
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=1.3e-29 Score=228.78 Aligned_cols=197 Identities=18% Similarity=0.203 Sum_probs=164.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||.|+||.||+|.+ .+++.||+|.+.......+.+.+|+.+++.+.|+| |+++++++...+..|+||||+
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 12 RKLGAGQFGEVWEGLW-NNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPK------LIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred EEecccCCccEEEEEe-cCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCC------ccceeEEEecCCCeeeeeeccc
Confidence 5799999999999996 45678999999765444567888999999999877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......+++..+..++.|++.+ +.+||+.|++|+|++++|+.+.+
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~Nil~~~--- 138 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASG-----------------------MAYLEAQNYIHRDLAARNVLVGE--- 138 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeccCCcceEEEcC---
Confidence 9999999987654467788888888888887 99999999999999999998862
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (261)
T cd05068 139 -------------------------------------------------------------------------------- 138 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc-ccccc---cceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-STIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-~~~~g---t~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
...++|+|||++....... ....| +..|+|||.+.+..++.++|+|||||+++++++ |..||.
T Consensus 139 ------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 206 (261)
T cd05068 139 ------------NNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYP 206 (261)
T ss_pred ------------CCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 3468999999886543211 11122 357999999988889999999999999999999 999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+.+
T Consensus 207 ~~~~~~~~ 214 (261)
T cd05068 207 GMTNAEVL 214 (261)
T ss_pred CCCHHHHH
Confidence 87765544
No 185
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=1.6e-29 Score=231.82 Aligned_cols=193 Identities=21% Similarity=0.298 Sum_probs=160.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++.||+|+||.||+|.+..+++.||+|++.... .......+|+.+++.++|+| |+++++++...++.|+|||
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHAN------IVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCC------EeEEEEEEecCCeEEEEEe
Confidence 367999999999999998899999999997532 22235678999999999887 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|+++++.+++.... ..+++..++.++.|++.| |.|||+.+++|+|+|+.|+.+.
T Consensus 84 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~i~H~dlkp~Nil~~-- 137 (291)
T cd07870 84 YMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRG-----------------------LAYIHGQHILHRDLKPQNLLIS-- 137 (291)
T ss_pred cccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCChHHEEEc--
Confidence 99889988876653 356777788888888887 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (291)
T cd07870 138 -------------------------------------------------------------------------------- 137 (291)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... ......+++.|+|||.+.+. .++.++|+|||||+++++++|..||
T Consensus 138 -------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f 204 (291)
T cd07870 138 -------------YLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAF 204 (291)
T ss_pred -------------CCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 134689999998764221 22334578899999998764 5788999999999999999999999
Q ss_pred cccC
Q psy2006 315 ARKT 318 (351)
Q Consensus 315 ~~~~ 318 (351)
.+.+
T Consensus 205 ~~~~ 208 (291)
T cd07870 205 PGVS 208 (291)
T ss_pred CCch
Confidence 7654
No 186
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=4.3e-30 Score=234.60 Aligned_cols=190 Identities=21% Similarity=0.292 Sum_probs=159.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||.|+||.||+|++..+|+.||+|.+.... .....+.+|+.+++.++|+| |+++++++...++.++|+|
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN------IVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCC------eeeHHHHhccCCceEEEEe
Confidence 67999999999999999999999999997532 22345678999999999877 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.| |.|||+++++|+|++++|+.+.
T Consensus 80 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~a-----------------------l~~LH~~~i~H~dl~~~nil~~-- 133 (284)
T cd07839 80 YCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKG-----------------------LAFCHSHNVLHRDLKPQNLLIN-- 133 (284)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEecCCCCHHHEEEc--
Confidence 99889999887653 357888888888888888 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (284)
T cd07839 134 -------------------------------------------------------------------------------- 133 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||.+...... .....+++.|+|||.+.+. .++.++|+||+||++|+|+||..||
T Consensus 134 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 134 -------------KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred -------------CCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 2356899999988653222 2334568899999998764 4688999999999999999988886
Q ss_pred cc
Q psy2006 315 AR 316 (351)
Q Consensus 315 ~~ 316 (351)
..
T Consensus 201 ~~ 202 (284)
T cd07839 201 FP 202 (284)
T ss_pred cC
Confidence 43
No 187
>KOG1151|consensus
Probab=99.96 E-value=5.1e-30 Score=234.37 Aligned_cols=218 Identities=22% Similarity=0.317 Sum_probs=174.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecc--------hhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKN--------VEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~--------~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-~ 72 (351)
-+||+|+|+.||+|.|..-.++||+|+-.. ...+.+.+.+|-+|.+.|.|+. ||++||+|..+. .
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpR------IVKlYDyfslDtds 542 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPR------IVKLYDYFSLDTDS 542 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcce------eeeeeeeeeecccc
Confidence 469999999999999999999999999732 2356678889999999999888 999999999776 7
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc--cccccccC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK--KREVRRVR 149 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~--~i~h~d~k 149 (351)
+|-|+||| |.+|.=+++..+ .+++..++.|+.|+..+ |.||.+. .|+|-|+|
T Consensus 543 FCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnA-----------------------L~YLNEikpPIIHYDLK 597 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNA-----------------------LKYLNEIKPPIIHYDLK 597 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHH-----------------------HHHHhccCCCeeeeccC
Confidence 99999999 778888888876 58899999999999988 9999875 48999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
|+||.|.+ .
T Consensus 598 PgNILLv~-----------G------------------------------------------------------------ 606 (775)
T KOG1151|consen 598 PGNILLVN-----------G------------------------------------------------------------ 606 (775)
T ss_pred CccEEEec-----------C------------------------------------------------------------
Confidence 99999883 0
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceecc----------ccccccccceeeCceeeecC----CCCCcc
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----------HHSTIVSTRHYRAPEVILEL----GWAQPC 295 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~----~~~~~~ 295 (351)
..-+.+||+|||++.+... ..+..+||-+|++||++.-. ..+.++
T Consensus 607 ---------------------tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKV 665 (775)
T KOG1151|consen 607 ---------------------TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKV 665 (775)
T ss_pred ---------------------cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccce
Confidence 1236799999999876321 12457899999999998733 358999
Q ss_pred ceeeeeeeeEeecccccccccc-CCCceeee------cccCCcccccccccccccCcc
Q psy2006 296 DVWSIGCIIFELYLGITLMARK-TKTKYFYH------GKLDWDEKGTAGRYVRENCKP 346 (351)
Q Consensus 296 DiwslG~~l~~l~tG~~pf~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 346 (351)
|+||+|+++|..+.|+-||-.. +..+++.+ ....|+.++. |+.+||+
T Consensus 666 DVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPv----VsseAka 719 (775)
T KOG1151|consen 666 DVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPV----VSSEAKA 719 (775)
T ss_pred eeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCc----cCHHHHH
Confidence 9999999999999999999654 44455432 3445665543 4455443
No 188
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=1.2e-29 Score=228.35 Aligned_cols=196 Identities=16% Similarity=0.207 Sum_probs=162.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||+|+||.||+|.+. +++.+|+|++.........+.+|+++++.+.|+| |+++++++...+..++||||+
T Consensus 10 ~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 10 KELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN------LVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred hhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCC------EEEEEEEEcCCCceEEEEecCC
Confidence 67999999999999874 5778999999754444456788999999999877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++..... .+++..+..++.|++.+ +.|||+++++|||+++.|+.+.
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~-----------------------l~~lH~~~i~H~dl~p~ni~i~---- 134 (256)
T cd05059 83 NGCLLNYLRERKG-KLGTEWLLDMCSDVCEA-----------------------MEYLESNGFIHRDLAARNCLVG---- 134 (256)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccccccHhhEEEC----
Confidence 8999999987542 57888888888888888 9999999999999999999876
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (256)
T cd05059 135 -------------------------------------------------------------------------------- 134 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc-ccc---cccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-STI---VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-~~~---~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
..+.++|+|||++....... ... .++..|+|||.+.+..++.++|+|||||++|++++ |..||.
T Consensus 135 -----------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 203 (256)
T cd05059 135 -----------EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203 (256)
T ss_pred -----------CCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence 23468999999886532211 111 22347999999988889999999999999999998 899998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
..+..+..
T Consensus 204 ~~~~~~~~ 211 (256)
T cd05059 204 RFSNSEVV 211 (256)
T ss_pred CCCHHHHH
Confidence 77665544
No 189
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.96 E-value=1.4e-29 Score=228.33 Aligned_cols=197 Identities=20% Similarity=0.258 Sum_probs=163.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||.|+||+||+|.+ .+++.||+|.+.......+.+.+|+.+++.+.|+| |+++++.+. .+..++||||+
T Consensus 11 ~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 11 VKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPR------LVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred eeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcC------eeeEEEEEc-cCCcEEEEEcC
Confidence 36899999999999996 46788999999865544567889999999999877 999998874 56799999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.......+++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~a-----------------------l~~LH~~~i~H~dl~p~ni~i~~-- 137 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEG-----------------------MAFIERKNYIHRDLRAANILVSE-- 137 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHhcCCeecccccHHhEEEcC--
Confidence 8999999987665677888888888888888 99999999999999999998762
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (260)
T cd05067 138 -------------------------------------------------------------------------------- 137 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc-c---cccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE-H---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...++|+|||.+..... . .....++..|+|||.+.+..++.++|+||||++++++++ |..||
T Consensus 138 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 204 (260)
T cd05067 138 -------------TLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPY 204 (260)
T ss_pred -------------CCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCC
Confidence 34689999998865331 1 122344568999999988888999999999999999998 99999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
.+.+..+..
T Consensus 205 ~~~~~~~~~ 213 (260)
T cd05067 205 PGMTNPEVI 213 (260)
T ss_pred CCCChHHHH
Confidence 877655443
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=2.1e-29 Score=229.52 Aligned_cols=192 Identities=18% Similarity=0.266 Sum_probs=161.7
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||+|+||+||+|.+..+++.||+|++.... .....+..|+.+++.++|++ |+.+++.|+..++.|+||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRF------IVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCC------EeeeeeEEecCCeEEEEEec
Confidence 799999999999998999999999996432 22334567999999998777 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.......+++..+..++.|++.+ |.|||+.|++|+|+++.|+.+.+
T Consensus 75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~di~p~Nil~~~- 130 (277)
T cd05577 75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG-----------------------LEHLHQRRIVYRDLKPENVLLDD- 130 (277)
T ss_pred CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHHEEECC-
Confidence 9 8999999987664567888888888888888 99999999999999999998761
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 131 -------------------------------------------------------------------------------- 130 (277)
T cd05577 131 -------------------------------------------------------------------------------- 130 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||.+..... ......++..|++||.+.+..++.++|+||+||+++++++|..||..
T Consensus 131 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 131 --------------HGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred --------------CCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 34689999998764321 22334567899999999888889999999999999999999999977
Q ss_pred cCC
Q psy2006 317 KTK 319 (351)
Q Consensus 317 ~~~ 319 (351)
.+.
T Consensus 197 ~~~ 199 (277)
T cd05577 197 RKE 199 (277)
T ss_pred Ccc
Confidence 554
No 191
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=2.1e-29 Score=232.94 Aligned_cols=197 Identities=23% Similarity=0.331 Sum_probs=161.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||.|+||.||++.+..+++.||+|.+.... ...+.+..|+++++.++|+| |+++++.+..++++|+|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF------VVSMFCSFETKRHLCMV 79 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCC------eeeeEEEEecCCEEEEE
Confidence 367999999999999999999999999997542 22345678999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ |++|.+++.... .+++..+..++.|++.| +.|+|+.+++|+|+++.|+.+
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~NIll 134 (305)
T cd05609 80 MEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLA-----------------------LEYLHNYGIVHRDLKPDNLLI 134 (305)
T ss_pred EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCchHHEEE
Confidence 9999 889999997764 57888888888888888 999999999999999999876
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (305)
T cd05609 135 TS------------------------------------------------------------------------------ 136 (305)
T ss_pred CC------------------------------------------------------------------------------
Confidence 52
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceec------------------cccccccccceeeCceeeecCCCCCccce
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD------------------EHHSTIVSTRHYRAPEVILELGWAQPCDV 297 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 297 (351)
.+.++++|||++.... .......++..|+|||.+.+..++.++|+
T Consensus 137 -----------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (305)
T cd05609 137 -----------------MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDW 199 (305)
T ss_pred -----------------CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhH
Confidence 2345666666553200 00112356788999999988889999999
Q ss_pred eeeeeeeEeeccccccccccCCCcee
Q psy2006 298 WSIGCIIFELYLGITLMARKTKTKYF 323 (351)
Q Consensus 298 wslG~~l~~l~tG~~pf~~~~~~~~~ 323 (351)
|||||++|++++|..||.+.+..+.+
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~ 225 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELF 225 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999999887766544
No 192
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=9.2e-30 Score=234.46 Aligned_cols=192 Identities=22% Similarity=0.291 Sum_probs=163.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||+||+|++..+++.||+|.+.... ...+.+.+|+.+++.++|+| |+++++.|...++.++|+||+
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN------IVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCc------eeeeeeeEecCceEEEEEEec
Confidence 57999999999999999999999999996532 33466788999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ +.|||+.|++|+|+++.|+.+.
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~a-----------------------l~~LH~~~i~H~dL~p~Nili~--- 149 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQA-----------------------LEFLHANQVIHRDIKSDNVLLG--- 149 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEEEC---
Confidence 89999988654 47788888888888887 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 150 -------------------------------------------------------------------------------- 149 (296)
T cd06655 150 -------------------------------------------------------------------------------- 149 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+.++|+|||++..... ......+++.|+|||.+.+..++.++|+|||||++|++++|..||..
T Consensus 150 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~ 217 (296)
T cd06655 150 ------------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (296)
T ss_pred ------------CCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 134689999998764322 12345678899999999888889999999999999999999999987
Q ss_pred cCCC
Q psy2006 317 KTKT 320 (351)
Q Consensus 317 ~~~~ 320 (351)
.+..
T Consensus 218 ~~~~ 221 (296)
T cd06655 218 ENPL 221 (296)
T ss_pred CCHH
Confidence 6543
No 193
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=2.3e-29 Score=229.25 Aligned_cols=195 Identities=25% Similarity=0.358 Sum_probs=164.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|++ |+++++.+..+.+.|+|||
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY------VTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCC------EeeEEEEEEECCEEEEEEe
Confidence 367999999999999998899999999997532 33456788999999998877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++... ++++..+..++.|++.+ ++|+|+.+++|+|++++|+.+.+
T Consensus 83 ~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~-----------------------l~~lh~~~ivH~dl~p~Nil~~~ 136 (277)
T cd06640 83 YLGGGSALDLLRAG---PFDEFQIATMLKEILKG-----------------------LDYLHSEKKIHRDIKAANVLLSE 136 (277)
T ss_pred cCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccCcCCChhhEEEcC
Confidence 99 88999998653 47777788888888777 99999999999999999998862
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (277)
T cd06640 137 -------------------------------------------------------------------------------- 136 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++++|||++..... ......++..|+|||.+.+..++.++|+|||||++|++++|..||
T Consensus 137 ---------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~ 201 (277)
T cd06640 137 ---------------QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 201 (277)
T ss_pred ---------------CCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCC
Confidence 34589999998755322 223346788899999998888899999999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
...+..+.
T Consensus 202 ~~~~~~~~ 209 (277)
T cd06640 202 SDMHPMRV 209 (277)
T ss_pred CCcChHhH
Confidence 87665443
No 194
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=2.4e-29 Score=232.40 Aligned_cols=198 Identities=18% Similarity=0.199 Sum_probs=156.8
Q ss_pred ccccCcccceEEEEEEeecCc--EEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS--VVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|.++.++. .+|+|.+... ......+.+|+.++.++ +|+| |+++++++...+..++|
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~------iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN------IINLLGACEHRGYLYLA 86 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCC------cceEEEEECCCCCceEE
Confidence 569999999999999887775 4577776532 23345677899999999 6776 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 77 FEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
|||+ +++|.+++..... ..+++..++.++.|++.| ++|||++
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a-----------------------l~~LH~~ 143 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG-----------------------MDYLSQK 143 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHH-----------------------HHHHHhC
Confidence 9999 8999999986532 134555666666666666 9999999
Q ss_pred cccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
|++|||+|+.|+.+.
T Consensus 144 gi~H~dlkp~Nili~----------------------------------------------------------------- 158 (303)
T cd05088 144 QFIHRDLAARNILVG----------------------------------------------------------------- 158 (303)
T ss_pred CccccccchheEEec-----------------------------------------------------------------
Confidence 999999999999886
Q ss_pred CCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccc--cccccceeeCceeeecCCCCCccceee
Q psy2006 222 DKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS--TIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
....++|+|||++........ ...++..|+|||.+.+..++.++|+||
T Consensus 159 ------------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 208 (303)
T cd05088 159 ------------------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 208 (303)
T ss_pred ------------------------------CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchh
Confidence 234689999998854221111 123356799999998888899999999
Q ss_pred eeeeeEeecc-ccccccccCCCcee
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
|||++++++| |..||.+.+..+.+
T Consensus 209 lG~il~ellt~g~~p~~~~~~~~~~ 233 (303)
T cd05088 209 YGVLLWEIVSLGGTPYCGMTCAELY 233 (303)
T ss_pred hhhHHHHHHhcCCCCcccCChHHHH
Confidence 9999999998 99999877665544
No 195
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=3.2e-29 Score=226.67 Aligned_cols=193 Identities=21% Similarity=0.274 Sum_probs=161.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||.|+||.||+|++..+++.||+|.+... ......+.+|+.+++.++|++ |+++++.+...++.++|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN------VIKYLDSFIEDNELNIVL 81 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcc------eeeeeeeEEECCeEEEEE
Confidence 6799999999999999999999999988542 233446778999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 78 EIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||+ +++|.+++.... ...+++..+..++.|++.| |.|||+++++|+|+++.|+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~dl~~~nil 138 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSA-----------------------VEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHH-----------------------HHHHhhCCeeCCCCCHHHEE
Confidence 999 789999886432 2346777777777777777 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 139 ~~------------------------------------------------------------------------------ 140 (267)
T cd08228 139 IT------------------------------------------------------------------------------ 140 (267)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 86
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++|+|||.+..... ......|++.|+|||.+.+..++.++|+||+|+++|++++|.
T Consensus 141 -----------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 203 (267)
T cd08228 141 -----------------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred -----------------CCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence 134589999998765332 122456788999999998888899999999999999999999
Q ss_pred ccccccC
Q psy2006 312 TLMARKT 318 (351)
Q Consensus 312 ~pf~~~~ 318 (351)
.||....
T Consensus 204 ~p~~~~~ 210 (267)
T cd08228 204 SPFYGDK 210 (267)
T ss_pred CCCcccc
Confidence 9997654
No 196
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.9e-29 Score=227.45 Aligned_cols=196 Identities=20% Similarity=0.288 Sum_probs=159.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHH-hCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQK-IGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~-l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++.||.|+||.||+|.+..+++.||+|++.+... .......|..++.. ..|+| |+++++.+..+++.|+
T Consensus 1 ~~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------i~~~~~~~~~~~~~~l 74 (260)
T cd05611 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPY------VAKLYYSFQSKDYLYL 74 (260)
T ss_pred CccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCC------eeeeeeeEEcCCeEEE
Confidence 4789999999999999988999999999975321 11223445444433 34555 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|+||+ +++|.++++... .+++..+..++.|++.| |.|||+.+++|+|+++.|+.
T Consensus 75 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~a-----------------------L~~lH~~~i~H~dl~p~nil 129 (260)
T cd05611 75 VMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLG-----------------------VEDLHQRGIIHRDIKPENLL 129 (260)
T ss_pred EEeccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHeE
Confidence 99999 899999998764 57888888888888888 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 130 ~~------------------------------------------------------------------------------ 131 (260)
T cd05611 130 ID------------------------------------------------------------------------------ 131 (260)
T ss_pred EC------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||++..... .....+++.|++||.+.+..++.++|+||+|++++++++|..||
T Consensus 132 -----------------~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~ 193 (260)
T cd05611 132 -----------------QTGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPF 193 (260)
T ss_pred -----------------CCCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCC
Confidence 234689999998765332 23456788999999998887899999999999999999999999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
...+..+.+
T Consensus 194 ~~~~~~~~~ 202 (260)
T cd05611 194 HAETPDAVF 202 (260)
T ss_pred CCCCHHHHH
Confidence 887766544
No 197
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=2.7e-29 Score=225.60 Aligned_cols=198 Identities=19% Similarity=0.278 Sum_probs=166.5
Q ss_pred ccccCcccceEEEEEEeec---CcEEEEEEecchhhh--hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV---DSVVALKIIKNVEKY--REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~--~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.|+||.||+|.+... +..||+|++...... .+.+.+|+++++.++|++ |+++++++.....+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPN------VVRLLGVCTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCC------hheeeeeecCCCceEEE
Confidence 5799999999999998766 899999999865332 567789999999999777 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcC-------CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc
Q psy2006 77 FEIL-GLSVFDFLKENN-------YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV 148 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~-------~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~ 148 (351)
|||+ +++|.+++.... ...+++..+..++.|++.| |.+||+++++|+|+
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------l~~lH~~~i~H~di 131 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG-----------------------MEYLASKKFVHRDL 131 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH-----------------------HHHHHcCCcccCcc
Confidence 9999 999999998762 1357777788888877777 99999999999999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
++.|+.+.+
T Consensus 132 ~p~nili~~----------------------------------------------------------------------- 140 (262)
T cd00192 132 AARNCLVGE----------------------------------------------------------------------- 140 (262)
T ss_pred CcceEEECC-----------------------------------------------------------------------
Confidence 999998872
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeee
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCI 303 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~ 303 (351)
...++|+|||.+...... .....+++.|+|||.+....++.++|+||+||+
T Consensus 141 ------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 196 (262)
T cd00192 141 ------------------------DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196 (262)
T ss_pred ------------------------CCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHH
Confidence 356899999988753321 234566789999999988888999999999999
Q ss_pred eEeecc-ccccccccCCCcee
Q psy2006 304 IFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 304 l~~l~t-G~~pf~~~~~~~~~ 323 (351)
++++++ |..||...+..+.+
T Consensus 197 l~~l~~~g~~p~~~~~~~~~~ 217 (262)
T cd00192 197 LWEIFTLGATPYPGLSNEEVL 217 (262)
T ss_pred HHHHHhcCCCCCCCCCHHHHH
Confidence 999998 69999887655543
No 198
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=1.8e-29 Score=228.23 Aligned_cols=193 Identities=24% Similarity=0.327 Sum_probs=160.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||.|+||+||+|.+ .+++.+|+|.+.... .....+.+|+.+++.++|+| |+++++++...+..|
T Consensus 6 ~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~ 78 (265)
T cd06631 6 EVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN------IVQYLGTCLDDNTIS 78 (265)
T ss_pred ceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCC------EeeEeeEeecCCeEE
Confidence 6799999999999986 588999999986431 22345788999999999877 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+|+||+ +++|.+++.+.. .+++..+..++.|++.+ |+|||+.+++|+|+++.|+
T Consensus 79 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dl~p~ni 133 (265)
T cd06631 79 IFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDG-----------------------VAYLHNNCVVHRDIKGNNV 133 (265)
T ss_pred EEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCcCHHhE
Confidence 999999 889999997754 56787888888888777 9999999999999999998
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 134 l~~~---------------------------------------------------------------------------- 137 (265)
T cd06631 134 MLMP---------------------------------------------------------------------------- 137 (265)
T ss_pred EECC----------------------------------------------------------------------------
Confidence 8762
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceec---------cccccccccceeeCceeeecCCCCCccceeeeeeee
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD---------EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCII 304 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 304 (351)
...++|+|||.+.... .......|+..|+|||.+.+..++.++|+||+||++
T Consensus 138 -------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~ 198 (265)
T cd06631 138 -------------------NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTV 198 (265)
T ss_pred -------------------CCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHH
Confidence 3457888888765321 112345678899999999888889999999999999
Q ss_pred EeeccccccccccCCCc
Q psy2006 305 FELYLGITLMARKTKTK 321 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~ 321 (351)
+++++|..||...+..+
T Consensus 199 ~~l~~g~~p~~~~~~~~ 215 (265)
T cd06631 199 FEMATGKPPLASMDRLA 215 (265)
T ss_pred HHHHhCCCccccCChHH
Confidence 99999999998765443
No 199
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=2e-29 Score=226.76 Aligned_cols=196 Identities=18% Similarity=0.233 Sum_probs=166.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||.|+||.||+|.+ .++.||+|.+.......+.+.+|+.+++.+.|++ |+++++++......++||||+
T Consensus 12 ~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 12 ATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPN------LVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred eeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcc------eeeeEEEEcCCCCeEEEEEecC
Confidence 5799999999999995 5899999999875544567889999999999877 999999999989999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.++++......+++..++.++.|++.+ |.|||+++++|+|++++|+.+.
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lh~~~i~H~di~p~Nili~---- 136 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEG-----------------------MEYLEEKNFVHRDLAARNVLVS---- 136 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccchhcccceEEEe----
Confidence 7899999987764567888888888888888 9999999999999999999886
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (256)
T cd05039 137 -------------------------------------------------------------------------------- 136 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCC
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTK 319 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~ 319 (351)
..+.++|+|||.+...........++..|+|||.+....++.++|+|||||+++++++ |..||...+.
T Consensus 137 -----------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 205 (256)
T cd05039 137 -----------EDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205 (256)
T ss_pred -----------CCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 2356899999988765433333444567999999988888999999999999999997 9999987765
Q ss_pred Ccee
Q psy2006 320 TKYF 323 (351)
Q Consensus 320 ~~~~ 323 (351)
.+..
T Consensus 206 ~~~~ 209 (256)
T cd05039 206 KDVV 209 (256)
T ss_pred HHHH
Confidence 5443
No 200
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=3e-29 Score=227.95 Aligned_cols=193 Identities=23% Similarity=0.323 Sum_probs=165.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||.||+|++..+++.||+|++.... .....+.+|+++++.+.|+| |++++++|..+...|+|+||
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPY------ITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCC------eeeeeEEEEECCeEEEEEEe
Confidence 57999999999999999999999999997542 23356788999999999877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++... ++++..+..++.|++.+ +.|||+++++|+|+++.|+.+.
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~-----------------------l~~lh~~~i~h~dl~p~ni~i~-- 132 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLG-----------------------LEYLHEEGKIHRDIKAANILLS-- 132 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHHEEEC--
Confidence 9 88999998765 57888888888888888 9999999999999999999886
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 133 -------------------------------------------------------------------------------- 132 (274)
T cd06609 133 -------------------------------------------------------------------------------- 132 (274)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++|+|||.+..... ......+++.|+|||.+.+..++.++|+||+||++|+++||..||.
T Consensus 133 -------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~ 199 (274)
T cd06609 133 -------------EEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS 199 (274)
T ss_pred -------------CCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 235689999998866432 2344677889999999988889999999999999999999999998
Q ss_pred ccCCCc
Q psy2006 316 RKTKTK 321 (351)
Q Consensus 316 ~~~~~~ 321 (351)
..+..+
T Consensus 200 ~~~~~~ 205 (274)
T cd06609 200 DLHPMR 205 (274)
T ss_pred cCchHH
Confidence 765443
No 201
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96 E-value=2.8e-29 Score=226.44 Aligned_cols=197 Identities=21% Similarity=0.246 Sum_probs=162.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||.|+||.||+|.+ .++..||+|.+.......+.+.+|+.+++.++|++ |+++++++. ....++||||+
T Consensus 11 ~~~ig~g~~~~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 11 IKKLGNGQFGEVWMGTW-NGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDK------LVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hheeccccCceEEEEEe-cCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCc------eEEEEeEEC-CCCcEEEEEec
Confidence 36899999999999986 46677999999865444567889999999999887 999999875 45789999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.......+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------l~~lH~~~i~H~di~p~Nili~~-- 137 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG-----------------------MAYIERMNYIHRDLRSANILVGD-- 137 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCccceEEEeC--
Confidence 8899999987654567888888888888888 99999999999999999998872
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (260)
T cd05070 138 -------------------------------------------------------------------------------- 137 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...++|+|||.+....... ....++..|+|||.+.+..++.++|+||||+++|++++ |..||
T Consensus 138 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~ 204 (260)
T cd05070 138 -------------GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 204 (260)
T ss_pred -------------CceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCC
Confidence 3468999999886532211 12234567999999888888999999999999999999 99999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
.+.+..+.+
T Consensus 205 ~~~~~~~~~ 213 (260)
T cd05070 205 PGMNNREVL 213 (260)
T ss_pred CCCCHHHHH
Confidence 887655544
No 202
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=2.1e-29 Score=234.10 Aligned_cols=195 Identities=15% Similarity=0.201 Sum_probs=157.6
Q ss_pred CccccCcccceEEEEEEeecCc----EEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDS----VVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++.||+|+||+||+|.+..+++ .||+|++... ....+.+.+|+.+++.+.|+| |+++++++... ..+
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~g~~~~~-~~~ 84 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH------VCRLLGICLTS-TVQ 84 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------CCeEEEEEcCC-Cce
Confidence 3679999999999999866655 4899998643 234567788999999999888 99999998764 577
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+|+||+ +|+|.+++.... ..++...+..++.|++.| |+|||+++++|||+|+.|+
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~iiH~dlkp~Ni 140 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKG-----------------------MNYLEERRLVHRDLAARNV 140 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHH-----------------------HHHHHhcCeeccccchhhe
Confidence 999999 999999998754 246777777777777777 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 141 ll~~---------------------------------------------------------------------------- 144 (316)
T cd05108 141 LVKT---------------------------------------------------------------------------- 144 (316)
T ss_pred EecC----------------------------------------------------------------------------
Confidence 8862
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
...+||+|||++....... ....++..|+|||.+.+..++.++|+|||||++|+++
T Consensus 145 -------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~ 205 (316)
T cd05108 145 -------------------PQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 205 (316)
T ss_pred -------------------CCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHH
Confidence 3458999999987532211 1223356899999999889999999999999999998
Q ss_pred c-ccccccccCCCc
Q psy2006 309 L-GITLMARKTKTK 321 (351)
Q Consensus 309 t-G~~pf~~~~~~~ 321 (351)
+ |..||.+.+..+
T Consensus 206 t~g~~p~~~~~~~~ 219 (316)
T cd05108 206 TFGSKPYDGIPASE 219 (316)
T ss_pred cCCCCCCCCCCHHH
Confidence 7 999998766544
No 203
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=3.1e-29 Score=226.76 Aligned_cols=192 Identities=22% Similarity=0.340 Sum_probs=163.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++|+| |+++++++...++.+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~ 79 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH------IIRMLGATCEDSHFN 79 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCc------eehhhceeccCCeEE
Confidence 57999999999999999999999999996422 23457788999999999888 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+||||+ +++|.+++.+.. ++++..+..++.|++.| |.|||++|++|+|+++.|+
T Consensus 80 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~a-----------------------l~~LH~~~i~H~~i~~~ni 134 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRG-----------------------LSYLHENQIIHRDVKGANL 134 (268)
T ss_pred EEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHE
Confidence 999999 899999998754 57888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+..
T Consensus 135 l~~~---------------------------------------------------------------------------- 138 (268)
T cd06630 135 LIDS---------------------------------------------------------------------------- 138 (268)
T ss_pred EEcC----------------------------------------------------------------------------
Confidence 7751
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc-------cccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-------HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||.+...... .....++..|+|||.+.+..++.++|+||+||++++
T Consensus 139 ------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 139 ------------------TGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred ------------------CCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 1235899999987653221 123467889999999988888999999999999999
Q ss_pred eccccccccccC
Q psy2006 307 LYLGITLMARKT 318 (351)
Q Consensus 307 l~tG~~pf~~~~ 318 (351)
+++|..||...+
T Consensus 201 l~~g~~p~~~~~ 212 (268)
T cd06630 201 MATAKPPWNAEK 212 (268)
T ss_pred HHhCCCCCCCCC
Confidence 999999997544
No 204
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=2.5e-29 Score=225.64 Aligned_cols=194 Identities=24% Similarity=0.332 Sum_probs=165.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
++||.|+||.||+|++..+++.||+|.+..... .+.+.+|+++++.++|++ |+++++.+....+.|+++||+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~------i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPY------IVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCc------EeeeeeeeecCCcEEEEEecCC
Confidence 579999999999999988899999999986533 567889999999998877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.... ..+++..++.++.|++.+ +.|||+.+++|+|++++|+.+.
T Consensus 82 ~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~H~dl~~~ni~~~---- 133 (256)
T cd06612 82 AGSVSDIMKITN-KTLTEEEIAAILYQTLKG-----------------------LEYLHSNKKIHRDIKAGNILLN---- 133 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCcceEEEC----
Confidence 889999987654 357788888888888877 9999999999999999999876
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (256)
T cd06612 134 -------------------------------------------------------------------------------- 133 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
....++|+|||++..... ......++..|+|||.+.+..++.++|+||+|++++++++|..||...
T Consensus 134 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 134 -----------EEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -----------CCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 234689999998865332 223456788999999998888899999999999999999999999876
Q ss_pred CCCc
Q psy2006 318 TKTK 321 (351)
Q Consensus 318 ~~~~ 321 (351)
+..+
T Consensus 203 ~~~~ 206 (256)
T cd06612 203 HPMR 206 (256)
T ss_pred chhh
Confidence 5544
No 205
>KOG2345|consensus
Probab=99.96 E-value=5.2e-30 Score=218.80 Aligned_cols=211 Identities=19% Similarity=0.182 Sum_probs=169.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~~l 75 (351)
++||+|+|+-||++.+..+++.||+|.+.... ...+.+.+|+...+++.|++ |++++++...+. ..||
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~------vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPN------VLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcc------hHHHHHHHHHhhccCceeEEE
Confidence 67999999999999999999999999998654 56778999999999999877 999998876554 5999
Q ss_pred EEecc-CCCHHHHHHhcCC--CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc--ccccccCC
Q psy2006 76 AFEIL-GLSVFDFLKENNY--LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK--REVRRVRR 150 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~--~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~d~k~ 150 (351)
+++|. .|+|.+.+.+... ..++|.++..++.+++.| |.++|+.. ..|||+||
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~g-----------------------L~~lH~~~~~yAH~DiKP 157 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRG-----------------------LEALHEKEPPYAHRDIKP 157 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHH-----------------------HHHHhccCCcccccCCCc
Confidence 99988 9999999987632 246677777777777776 99999998 99999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
+|+.++|
T Consensus 158 ~NILls~------------------------------------------------------------------------- 164 (302)
T KOG2345|consen 158 ANILLSD------------------------------------------------------------------------- 164 (302)
T ss_pred ceeEecC-------------------------------------------------------------------------
Confidence 9999983
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc------------ccccccccceeeCceeeec---CCCCCcc
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------------HHSTIVSTRHYRAPEVILE---LGWAQPC 295 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------------~~~~~~gt~~y~aPE~~~~---~~~~~~~ 295 (351)
.+.++++|||.+..... .-..-.+|..|+|||++.- .-.+.++
T Consensus 165 ----------------------~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert 222 (302)
T KOG2345|consen 165 ----------------------SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERT 222 (302)
T ss_pred ----------------------CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccccc
Confidence 35678999998764211 0112345789999999863 3458999
Q ss_pred ceeeeeeeeEeeccccccccccCCCce-----eeecccCCcccccc
Q psy2006 296 DVWSIGCIIFELYLGITLMARKTKTKY-----FYHGKLDWDEKGTA 336 (351)
Q Consensus 296 DiwslG~~l~~l~tG~~pf~~~~~~~~-----~~~~~~~~~~~~~~ 336 (351)
|||||||++|+++.|..||+..-...- ..++.+.|+..+..
T Consensus 223 DIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~y 268 (302)
T KOG2345|consen 223 DIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRY 268 (302)
T ss_pred chhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCc
Confidence 999999999999999999977543322 24688888887763
No 206
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.3e-29 Score=230.19 Aligned_cols=197 Identities=20% Similarity=0.241 Sum_probs=161.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++++.|+| |+++++.|..+++.++|||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPY------IVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCc------HHhhhhheecCCeEEEEEe
Confidence 46899999999999999889999999998753 233456788999999998877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcC-CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEE
Q psy2006 79 IL-GLSVFDFLKENN-YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRL 155 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~-~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l 155 (351)
|+ +++|.+++.... ...+++..++.++.|++.+ +.|||+ .+++|+|+++.|+.+
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~~i~H~dl~p~nil~ 136 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKG-----------------------LKFLKEEHNIIHRDVKPTNVLV 136 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHH-----------------------HHHHHhcCCEeeCCCCHHHEEE
Confidence 99 889999887642 1256777778877777777 999996 599999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 137 ~------------------------------------------------------------------------------- 137 (286)
T cd06622 137 N------------------------------------------------------------------------------- 137 (286)
T ss_pred C-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecCC------CCCccceeeeeeeeEeec
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILELG------WAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslG~~l~~l~ 308 (351)
....++|+|||.+.... .......+++.|+|||.+.+.. ++.++|+||+||++|+++
T Consensus 138 ----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~ 201 (286)
T cd06622 138 ----------------GNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMA 201 (286)
T ss_pred ----------------CCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHH
Confidence 23468999999886532 2233456788999999986543 478999999999999999
Q ss_pred cccccccccCCCc
Q psy2006 309 LGITLMARKTKTK 321 (351)
Q Consensus 309 tG~~pf~~~~~~~ 321 (351)
+|..||...+...
T Consensus 202 ~g~~pf~~~~~~~ 214 (286)
T cd06622 202 LGRYPYPPETYAN 214 (286)
T ss_pred hCCCCCCCcchhh
Confidence 9999997655443
No 207
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=2.2e-29 Score=237.65 Aligned_cols=189 Identities=22% Similarity=0.416 Sum_probs=158.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
+.||+|+||.||+|.+..+++.||+|++.+. ......+.+|+.+++.++|+| |++++++|.... +
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKN------IIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCC------CcceeeeeccCCCccccCc
Confidence 6799999999999999999999999998642 233456678999999999888 999999987543 6
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+||||++++|.+.+... +++..+..++.|++.| |+|||++|++|||+|+.|
T Consensus 96 ~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~a-----------------------L~~LH~~gi~H~dlkp~N 148 (353)
T cd07850 96 VYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCG-----------------------IKHLHSAGIIHRDLKPSN 148 (353)
T ss_pred EEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeCCCCHHH
Confidence 8999999988999987653 6777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 149 il~~---------------------------------------------------------------------------- 152 (353)
T cd07850 149 IVVK---------------------------------------------------------------------------- 152 (353)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccc--cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH--HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.++|+|||++...... .....+++.|+|||.+.+..++.++|+||+||++++|++|
T Consensus 153 -------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g 213 (353)
T cd07850 153 -------------------SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 213 (353)
T ss_pred -------------------CCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHC
Confidence 2356899999998754322 2335678899999999999999999999999999999999
Q ss_pred cccccccC
Q psy2006 311 ITLMARKT 318 (351)
Q Consensus 311 ~~pf~~~~ 318 (351)
..||...+
T Consensus 214 ~~pf~~~~ 221 (353)
T cd07850 214 TVLFPGTD 221 (353)
T ss_pred CCCCCCCC
Confidence 99997665
No 208
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=2.5e-29 Score=229.63 Aligned_cols=197 Identities=16% Similarity=0.277 Sum_probs=155.1
Q ss_pred ccccCcccceEEEEEEe----ecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVY----EVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++||+|+||+||+|.+. .+++.||+|.+.... .....+.+|+.+++.+.|+| |+++++++......|+
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~l 84 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPN------IVCLLGVVTQEQPVCM 84 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCC------eeeEEEEEecCCceEE
Confidence 67999999999999853 356899999997432 23356788999999999888 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCC---------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccc
Q psy2006 76 AFEIL-GLSVFDFLKENNY---------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~---------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH 139 (351)
||||+ +++|.+++..... ..+++..+..++.|++ .||.|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~-----------------------~al~~lH 141 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIA-----------------------AGMEYLS 141 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHH-----------------------HHHHHHH
Confidence 99999 8899999864421 1234444444444444 4599999
Q ss_pred cccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCC
Q psy2006 140 KKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHP 219 (351)
Q Consensus 140 ~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~ 219 (351)
+++++|+|+|+.|+.+.+
T Consensus 142 ~~~i~H~dlkp~nili~~-------------------------------------------------------------- 159 (283)
T cd05090 142 SHFFVHKDLAARNILIGE-------------------------------------------------------------- 159 (283)
T ss_pred hcCeehhccccceEEEcC--------------------------------------------------------------
Confidence 999999999999998761
Q ss_pred CCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCc
Q psy2006 220 FFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQP 294 (351)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ 294 (351)
...+||+|||++..... ......++..|+|||.+.+..++.+
T Consensus 160 ---------------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (283)
T cd05090 160 ---------------------------------QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSD 206 (283)
T ss_pred ---------------------------------CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCch
Confidence 34589999998864321 1223445667999999988888999
Q ss_pred cceeeeeeeeEeecc-ccccccccCCCce
Q psy2006 295 CDVWSIGCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 295 ~DiwslG~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
+|+|||||++|++++ |..||.+.+..++
T Consensus 207 ~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 207 SDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred hhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999998 9999987665443
No 209
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=4.4e-29 Score=225.09 Aligned_cols=194 Identities=19% Similarity=0.249 Sum_probs=156.8
Q ss_pred cccCcccceEEEEEEe--ecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 3 SLNCVASNHVCTNVVY--EVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
.||+|+||.||+|.++ .++..||+|++.... ...+.+.+|+.+++.++|+| |+++++++. ....++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~------ii~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPY------IVRMIGVCE-AEALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCC------eEEEEEEEc-CCCeEEEEE
Confidence 5999999999999875 345679999997542 33456789999999999887 999999885 457899999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.... ..+++..+..++.|++.+ +.|||++|++|+|+|+.|+.+.
T Consensus 75 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dlkp~nil~~- 129 (257)
T cd05115 75 MASGGPLNKFLSGKK-DEITVSNVVELMHQVSMG-----------------------MKYLEGKNFVHRDLAARNVLLV- 129 (257)
T ss_pred eCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhcCeeecccchheEEEc-
Confidence 99 899999987643 357888888888888888 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 130 -------------------------------------------------------------------------------- 129 (257)
T cd05115 130 -------------------------------------------------------------------------------- 129 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-c
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-G 310 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G 310 (351)
....+||+|||.+...... .....+++.|+|||.+....++.++|+|||||++|++++ |
T Consensus 130 --------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g 195 (257)
T cd05115 130 --------------NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYG 195 (257)
T ss_pred --------------CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCC
Confidence 1346889999987643211 111223568999999988888999999999999999986 9
Q ss_pred cccccccCCCce
Q psy2006 311 ITLMARKTKTKY 322 (351)
Q Consensus 311 ~~pf~~~~~~~~ 322 (351)
..||.+.+..++
T Consensus 196 ~~p~~~~~~~~~ 207 (257)
T cd05115 196 QKPYKKMKGPEV 207 (257)
T ss_pred CCCcCcCCHHHH
Confidence 999987765543
No 210
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=3.1e-29 Score=230.25 Aligned_cols=196 Identities=21% Similarity=0.327 Sum_probs=163.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||.|+||+||+|.+..+++.||+|.+.... ...+.+.+|+++++.++|+| |+++++++....+.|+|||
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN------IVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCC------EeeEEEEEecCCeEEEEEe
Confidence 57999999999999998899999999996532 22345778999999999877 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+.+.......+++..++.++.|++.| |+|||+++++|+|++++|+.+.+
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~i~H~dl~p~nill~~- 137 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRG-----------------------IAYCHSHRVLHRDLKPQNLLIDR- 137 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeCCCCCcceEEEEC-
Confidence 998899999877655556777888888888888 99999999999999999998861
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (294)
T PLN00009 138 -------------------------------------------------------------------------------- 137 (294)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....+||+|||++...... .....+++.|+|||.+.+. .++.++|+||+||++++++||.+||
T Consensus 138 -------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf 204 (294)
T PLN00009 138 -------------RTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLF 204 (294)
T ss_pred -------------CCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 1235899999988653221 2334567899999988664 5688999999999999999999999
Q ss_pred cccCCC
Q psy2006 315 ARKTKT 320 (351)
Q Consensus 315 ~~~~~~ 320 (351)
...+..
T Consensus 205 ~~~~~~ 210 (294)
T PLN00009 205 PGDSEI 210 (294)
T ss_pred CCCCHH
Confidence 876543
No 211
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=3.1e-29 Score=228.43 Aligned_cols=201 Identities=18% Similarity=0.231 Sum_probs=161.9
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||+|+||.||+|.+.. ++..||+|.+... ......+..|+.+++.++|+| |+++++++...+..+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~ 85 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQN------IVRLIGVSFERLPRF 85 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCC------EeeEEEEEccCCCcE
Confidence 679999999999999877 7789999998643 223356788999999999887 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCC-----CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY-----LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV 148 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~-----~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~ 148 (351)
+||||+ +++|.+++..... ..+++..+..++.|++.+ +.|||+++++|+|+
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~LH~~~ivH~dl 142 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG-----------------------CKYLEENHFIHRDI 142 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeeccc
Confidence 999999 8999999987642 235666677777777766 99999999999999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
+++|+.+.+.|
T Consensus 143 kp~nil~~~~~--------------------------------------------------------------------- 153 (277)
T cd05036 143 AARNCLLTCKG--------------------------------------------------------------------- 153 (277)
T ss_pred chheEEEeccC---------------------------------------------------------------------
Confidence 99999887311
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeee
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCI 303 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~ 303 (351)
....++|+|||++...... ......+..|+|||.+.+..++.++|+|||||+
T Consensus 154 -----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 154 -----------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred -----------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 1235899999988653211 112233467999999988889999999999999
Q ss_pred eEeecc-ccccccccCCCcee
Q psy2006 304 IFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 304 l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+|++++ |..||.+.+..+..
T Consensus 211 l~el~~~g~~pf~~~~~~~~~ 231 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQEVM 231 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHH
Confidence 999996 99999887766543
No 212
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=3.4e-29 Score=234.97 Aligned_cols=220 Identities=19% Similarity=0.220 Sum_probs=159.5
Q ss_pred CccccCcccceEEEEEEe-----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeC-C
Q psy2006 1 MCSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYH-G 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~-~ 71 (351)
.+.||+|+||.||+|.+. .+++.||+|++... ....+.+.+|+++++++ .|+| |+++++++... .
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~n------iv~~~~~~~~~~~ 85 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLN------VVNLLGACTKPGG 85 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcc------hhheeeeEecCCC
Confidence 367999999999999743 34589999999743 23345677899999999 5666 99999988655 4
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHH--HHHHH------H----------------------------HHHHhhhc
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQ--VRHMS------Y----------------------------QLIYAKEN 114 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~--~~~~~------~----------------------------ql~~~~~~ 114 (351)
.+++||||+ +++|.+++........+... ..... . .-......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 799999999 89999999764321110000 00000 0 00000001
Q ss_pred CCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHH
Q psy2006 115 NYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQL 194 (351)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~ 194 (351)
...+++.+.+..++.|++.||.|||+++++|||+|+.|+.+.+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~------------------------------------- 208 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE------------------------------------- 208 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC-------------------------------------
Confidence 1125677778888888888899999999999999999998872
Q ss_pred HHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----
Q psy2006 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----- 269 (351)
Q Consensus 195 ~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----- 269 (351)
...++|+|||++.....
T Consensus 209 ----------------------------------------------------------~~~vkL~DfG~a~~~~~~~~~~ 230 (337)
T cd05054 209 ----------------------------------------------------------NNVVKICDFGLARDIYKDPDYV 230 (337)
T ss_pred ----------------------------------------------------------CCcEEEeccccchhcccCcchh
Confidence 24589999998865321
Q ss_pred ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCCCc
Q psy2006 270 HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTKTK 321 (351)
Q Consensus 270 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~ 321 (351)
......++..|+|||.+.+..++.++|+||+||+++++++ |..||.+....+
T Consensus 231 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~ 283 (337)
T cd05054 231 RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE 283 (337)
T ss_pred hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH
Confidence 1123445678999999999999999999999999999997 999997754433
No 213
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=6e-29 Score=227.29 Aligned_cols=197 Identities=22% Similarity=0.277 Sum_probs=159.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEe-----eCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFD-----YHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~-----~~~~~~ 74 (351)
++.||+|+||.||+|.+..+++.+|+|++.......+.+..|+.+++.+ +|+| |+++++++. .+++.+
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~------i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPN------VVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCC------eeeeeeeeeecccCCCCeEE
Confidence 3679999999999999999999999999876444446677899999999 5777 999999884 345899
Q ss_pred EEEecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 75 IAFEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+||||+ +++|.+++... ....+++..+..++.|++.+ +.|||+.+++|||+++.
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dlkp~ 153 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG-----------------------LQHLHVNKTIHRDVKGN 153 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHH-----------------------HHHHHhCCccccCCCHH
Confidence 999999 89999987642 22356777777777777777 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.+
T Consensus 154 nili~~-------------------------------------------------------------------------- 159 (286)
T cd06638 154 NILLTT-------------------------------------------------------------------------- 159 (286)
T ss_pred hEEECC--------------------------------------------------------------------------
Confidence 998872
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-----CCCCCccceeeeeee
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCI 303 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~ 303 (351)
...++|+|||++..... ......|++.|+|||.+.. ..++.++|+||+||+
T Consensus 160 ---------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 218 (286)
T cd06638 160 ---------------------EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT 218 (286)
T ss_pred ---------------------CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence 34589999998865322 2234568899999998753 457889999999999
Q ss_pred eEeeccccccccccCCCc
Q psy2006 304 IFELYLGITLMARKTKTK 321 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~~~ 321 (351)
+|++++|..||......+
T Consensus 219 ~~el~~g~~p~~~~~~~~ 236 (286)
T cd06638 219 AIELGDGDPPLADLHPMR 236 (286)
T ss_pred HHHHhcCCCCCCCCchhH
Confidence 999999999997765433
No 214
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=3.2e-29 Score=228.79 Aligned_cols=195 Identities=26% Similarity=0.346 Sum_probs=165.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.|+| |+++++++......++|||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY------VVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCC------CcceeeEEecCCeeEEEec
Confidence 57999999999999998899999999997532 23456789999999998777 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..++.++.|++.+ |.|||+.+++|+|+++.|+.+.+
T Consensus 80 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~ni~~~~- 134 (286)
T cd07832 80 YMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKG-----------------------VAYMHANGIMHRDLKPANLLISA- 134 (286)
T ss_pred ccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCcCHHHEEEcC-
Confidence 99999999987654 467888888888888888 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (286)
T cd07832 135 -------------------------------------------------------------------------------- 134 (286)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++|+|||.+...... .....++..|+|||.+.+. .++.++|+||+||+++++++|.+|
T Consensus 135 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~ 200 (286)
T cd07832 135 --------------DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPL 200 (286)
T ss_pred --------------CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcC
Confidence 346899999987653322 2345788899999998754 458899999999999999999999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|.+.+..+
T Consensus 201 ~~~~~~~~ 208 (286)
T cd07832 201 FPGENDIE 208 (286)
T ss_pred cCCCCHHH
Confidence 98766544
No 215
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=4e-29 Score=224.36 Aligned_cols=198 Identities=19% Similarity=0.238 Sum_probs=167.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|+||.||+|.+..+++.+|+|.+... ....+.+.+|+++++.++|++ |+++++.+...+..++|||
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN------IIEYYENFLEDKALMIVME 79 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCc------hhheeeeEecCCEEEEEEe
Confidence 6799999999999999999999999999653 233456788999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.......+++..+..++.|++.+ +.|||++|++|+|+++.|+.+.+
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lh~~~i~h~dl~~~nil~~~ 136 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA-----------------------LHHVHTKLILHRDLKTQNILLDK 136 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEEEcC
Confidence 99 8899999987654557888888888888888 99999999999999999998862
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (256)
T cd08220 137 -------------------------------------------------------------------------------- 136 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++++|||.+..... ......+++.|+|||.+.+..++.++|+||+|++++++++|..||.
T Consensus 137 --------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 202 (256)
T cd08220 137 --------------HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFE 202 (256)
T ss_pred --------------CCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 123579999998875432 2234567889999999988888999999999999999999999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
..+....
T Consensus 203 ~~~~~~~ 209 (256)
T cd08220 203 AANLPAL 209 (256)
T ss_pred cCchHHH
Confidence 7765443
No 216
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=9.4e-30 Score=234.53 Aligned_cols=194 Identities=19% Similarity=0.283 Sum_probs=163.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
.+||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.+.|+| |+++++.|..++..|+||||+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~------i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQN------VVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCc------hhhhhhheeeCCeEEEEEecC
Confidence 4799999999999999889999999999643 233456788999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 101 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~ivH~dl~p~Nill~--- 151 (297)
T cd06659 101 QGGALTDIVSQT---RLNEEQIATVCESVLQA-----------------------LCYLHSQGVIHRDIKSDSILLT--- 151 (297)
T ss_pred CCCCHHHHHhhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHeEEc---
Confidence 88999877553 46777788888888777 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 152 -------------------------------------------------------------------------------- 151 (297)
T cd06659 152 -------------------------------------------------------------------------------- 151 (297)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||++..... ......|++.|+|||.+.+..++.++|+||+||+++++++|..||..
T Consensus 152 ------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 219 (297)
T cd06659 152 ------------LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS 219 (297)
T ss_pred ------------cCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 234689999998754221 22345688999999999888899999999999999999999999987
Q ss_pred cCCCce
Q psy2006 317 KTKTKY 322 (351)
Q Consensus 317 ~~~~~~ 322 (351)
.+..+.
T Consensus 220 ~~~~~~ 225 (297)
T cd06659 220 DSPVQA 225 (297)
T ss_pred CCHHHH
Confidence 654443
No 217
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=2e-29 Score=229.65 Aligned_cols=194 Identities=24% Similarity=0.333 Sum_probs=163.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.++|++ |+++++.|..+.+.|+||||
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY------ITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCc------cHhhhcccccCCceEEEEEc
Confidence 5799999999999999889999999998743 233456788999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++... .+++..++.++.|++.+ +.|||+++++|+|++++|+.+.+
T Consensus 84 ~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~ivH~dl~p~ni~i~~- 136 (277)
T cd06642 84 LGGGSALDLLKPG---PLEETYIATILREILKG-----------------------LDYLHSERKIHRDIKAANVLLSE- 136 (277)
T ss_pred cCCCcHHHHhhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHhcCCeeccCCChheEEEeC-
Confidence 9 88999988653 47788888888888887 99999999999999999998872
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (277)
T cd06642 137 -------------------------------------------------------------------------------- 136 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
...++++|||++..... ......++..|+|||.+.+..++.++|+|||||+++++++|..||.
T Consensus 137 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06642 137 --------------QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred --------------CCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCc
Confidence 34589999998765322 2233567889999999988888999999999999999999999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
..+..+.
T Consensus 203 ~~~~~~~ 209 (277)
T cd06642 203 DLHPMRV 209 (277)
T ss_pred ccchhhH
Confidence 6654443
No 218
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=3.8e-29 Score=224.76 Aligned_cols=198 Identities=19% Similarity=0.288 Sum_probs=167.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||.|+||.||++.+..+++.||+|.+... ....+.+.+|+.+++.++|+| |+++++.|...++.|+||
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN------IVQYQESFEENGNLYIVM 78 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCC------eeeeEeeecCCCeEEEEE
Confidence 36899999999999999999999999999643 233457789999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.......+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~~l~~~nil~~ 135 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA-----------------------LKHVHDRKILHRDIKSQNIFLT 135 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCCCCHHHEEEc
Confidence 999 8899999987654567888888888888888 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (256)
T cd08218 136 -------------------------------------------------------------------------------- 135 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++++|||++...... .....|++.|+|||.+.+...+.++|+||+||+++++++|..|
T Consensus 136 ---------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~ 200 (256)
T cd08218 136 ---------------KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA 200 (256)
T ss_pred ---------------CCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCC
Confidence 2346899999988653322 1235678899999999888889999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|...+..+.
T Consensus 201 ~~~~~~~~~ 209 (256)
T cd08218 201 FEAGNMKNL 209 (256)
T ss_pred ccCCCHHHH
Confidence 976654443
No 219
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=3e-29 Score=226.85 Aligned_cols=196 Identities=21% Similarity=0.242 Sum_probs=161.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch------hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV------EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~ 73 (351)
+.||.|+||.||+|.+..+++.||+|++... ......+.+|+.++++++|++ |+++++.+... +.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~------i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDR------IVQYYGCLRDPEEKKL 81 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCC------cceEEEEEEcCCCCEE
Confidence 5799999999999999999999999998532 123346778999999999888 99999998764 478
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++|+||+ +++|.+++.... .+++..++.++.|++.+ +.|||+.|++|+|++++|
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~a-----------------------l~~LH~~~i~H~dl~p~n 136 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQG-----------------------VSYLHSNMIVHRDIKGAN 136 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCCCCHHH
Confidence 9999999 889999987754 47788888888888888 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 137 i~i~---------------------------------------------------------------------------- 140 (264)
T cd06653 137 ILRD---------------------------------------------------------------------------- 140 (264)
T ss_pred EEEc----------------------------------------------------------------------------
Confidence 9875
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||.+..... ......++..|+|||.+.+..++.++|+|||||++++
T Consensus 141 -------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 201 (264)
T cd06653 141 -------------------SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVE 201 (264)
T ss_pred -------------------CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHH
Confidence 134578999998764221 1123467889999999988888999999999999999
Q ss_pred eccccccccccCCCcee
Q psy2006 307 LYLGITLMARKTKTKYF 323 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~~ 323 (351)
+++|..||...+..+.+
T Consensus 202 l~~g~~p~~~~~~~~~~ 218 (264)
T cd06653 202 MLTEKPPWAEYEAMAAI 218 (264)
T ss_pred HHhCCCCCCccCHHHHH
Confidence 99999999876544443
No 220
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=7.2e-29 Score=223.21 Aligned_cols=194 Identities=20% Similarity=0.244 Sum_probs=160.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEe-eCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD-YHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~-~~~~~~lV~E~~ 80 (351)
+.||+|+||.||+|. ..++.||+|.+.... ..+.+.+|+.+++.++|++ |+++++++. ..+..++||||+
T Consensus 12 ~~lg~g~~~~v~~~~--~~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 12 QTIGKGEFGDVMLGD--YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSN------LVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred eeecccCCCeEEEEE--EcCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCC------eeeEEEEEEcCCCceEEEEECC
Confidence 579999999999998 458899999997532 3456788999999999877 999998764 456899999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.++++......+++..+..++.|++.+ |.|||++|++|||++++|+.+.+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dlkp~nil~~~-- 137 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA-----------------------MEYLEANNFVHRDLAARNVLVSE-- 137 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeccccchheEEEcC--
Confidence 7899999987654457788888888888888 99999999999999999998872
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (256)
T cd05082 138 -------------------------------------------------------------------------------- 137 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccC
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKT 318 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~ 318 (351)
...+||+|||++...........++..|+|||.+.+..++.++|+||+||++|++++ |..||...+
T Consensus 138 -------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 138 -------------DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred -------------CCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 346899999988754433344455678999999988888999999999999999997 999997665
Q ss_pred CCce
Q psy2006 319 KTKY 322 (351)
Q Consensus 319 ~~~~ 322 (351)
..+.
T Consensus 205 ~~~~ 208 (256)
T cd05082 205 LKDV 208 (256)
T ss_pred HHHH
Confidence 4443
No 221
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=3.7e-29 Score=228.76 Aligned_cols=192 Identities=21% Similarity=0.294 Sum_probs=163.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||+|+||+||+|.+..+++.||+|++... ....+.+.+|+++++.++|+| |+++++.+...++.++||||
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPY------IVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCC------cceEeeeEecCCEEEEEEec
Confidence 6799999999999999889999999998653 233467789999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEee
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLID 157 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~D 157 (351)
+ +++|.+++...+ .+++..+..++.|++.+ +.|||+ .+++|+|+++.|+.+.+
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~~i~H~dl~p~nil~~~ 139 (284)
T cd06620 85 MDCGSLDRIYKKGG--PIPVEILGKIAVAVVEG-----------------------LTYLYNVHRIMHRDIKPSNILVNS 139 (284)
T ss_pred CCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHH-----------------------HHHHHHhcCeeccCCCHHHEEECC
Confidence 9 889999887754 57788888888888777 999997 58999999999988762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 140 -------------------------------------------------------------------------------- 139 (284)
T cd06620 140 -------------------------------------------------------------------------------- 139 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCccee-ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFD-DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||++... ........|+..|+|||.+.+..++.++|+||+||+++++++|..||..
T Consensus 140 ---------------~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 140 ---------------RGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF 204 (284)
T ss_pred ---------------CCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 346899999987543 2222345788999999999888889999999999999999999999986
Q ss_pred cCC
Q psy2006 317 KTK 319 (351)
Q Consensus 317 ~~~ 319 (351)
...
T Consensus 205 ~~~ 207 (284)
T cd06620 205 SNI 207 (284)
T ss_pred cch
Confidence 554
No 222
>KOG0666|consensus
Probab=99.96 E-value=2.3e-30 Score=227.42 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=162.5
Q ss_pred ccccCcccceEEEEEEeec----CcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee-CCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEV----DSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY-HGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~----~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~-~~~~ 73 (351)
.+||+|.||.||+|+...+ .+.+|||.++... ....++.+|+.+++.++|+| |+.|..+|.. +..+
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~n------vi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPN------VISLVKVFLSHDKKV 103 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCc------chhHHHHHhccCceE
Confidence 5799999999999975543 2389999998642 23457889999999999888 9999999988 6699
Q ss_pred EEEEeccCCCHHHHHHhc---CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 74 CIAFEILGLSVFDFLKEN---NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~---~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
+|++||+..+|.+.|+-. ....+|..-+++++.||+.| +.|||+.=|+|||+||
T Consensus 104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~G-----------------------v~YLH~NWvlHRDLKP 160 (438)
T KOG0666|consen 104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDG-----------------------VHYLHSNWVLHRDLKP 160 (438)
T ss_pred EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhh-----------------------hHHHhhhheeeccCCc
Confidence 999999999999998644 22457777788888888877 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.||++.- .
T Consensus 161 aNIlvmg-----------d------------------------------------------------------------- 168 (438)
T KOG0666|consen 161 ANILVMG-----------D------------------------------------------------------------- 168 (438)
T ss_pred ceEEEec-----------c-------------------------------------------------------------
Confidence 9998871 0
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecC-CCCCccceeeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILEL-GWAQPCDVWSIGCI 303 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~ 303 (351)
.+.++.|||+|+|+++....+. ...+-|.+|+|||+++|. -|+++.|+|++||+
T Consensus 169 -------------------gperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCI 229 (438)
T KOG0666|consen 169 -------------------GPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCI 229 (438)
T ss_pred -------------------CCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHH
Confidence 0246889999999998754433 335568899999999986 46899999999999
Q ss_pred eEeeccccccccccC
Q psy2006 304 IFELYLGITLMARKT 318 (351)
Q Consensus 304 l~~l~tG~~pf~~~~ 318 (351)
+.||+|-+++|.+..
T Consensus 230 faElLtl~PlF~g~E 244 (438)
T KOG0666|consen 230 FAELLTLEPLFKGRE 244 (438)
T ss_pred HHHHHccCccccchh
Confidence 999999999998864
No 223
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=5.1e-29 Score=224.03 Aligned_cols=199 Identities=19% Similarity=0.132 Sum_probs=160.5
Q ss_pred ccccCcccceEEEEEEeecC----------cEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYEVD----------SVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
+.||+|+||.||+|.+..++ ..+++|++.........+.+|+.+++.++|+| |+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH------LVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcc------hhheeeEEec-C
Confidence 57999999999999987766 35888888765443567788999999999887 9999999988 7
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
..++||||+ +++|.+++..... .+++..+..++.|++.| |.|||+++++|+|+|+
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~dlkp 129 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASA-----------------------LHYLEDKKLVHGNVCG 129 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHH-----------------------HHHHhhCCeecccCcc
Confidence 889999999 8999999987652 57777788888888887 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+-+..
T Consensus 130 ~Nill~~~~~~--------------------------------------------------------------------- 140 (259)
T cd05037 130 KNILVARYGLN--------------------------------------------------------------------- 140 (259)
T ss_pred ceEEEecCccc---------------------------------------------------------------------
Confidence 99998731100
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecC--CCCCccceeeeeeeeEeec
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~ 308 (351)
......++|+|||.+..... .....++..|+|||.+.+. .++.++|+||+||++++++
T Consensus 141 -------------------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 141 -------------------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred -------------------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 00124689999999875433 2334566789999999876 6799999999999999999
Q ss_pred c-ccccccccCCC
Q psy2006 309 L-GITLMARKTKT 320 (351)
Q Consensus 309 t-G~~pf~~~~~~ 320 (351)
+ |..||...+..
T Consensus 201 ~~~~~p~~~~~~~ 213 (259)
T cd05037 201 SNGEEPLSTLSSS 213 (259)
T ss_pred hCCCCCcccCCch
Confidence 8 68888776543
No 224
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=4.2e-29 Score=225.01 Aligned_cols=194 Identities=18% Similarity=0.253 Sum_probs=157.4
Q ss_pred ccccCcccceEEEEEEe--ecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVY--EVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||+|+||+||+|.++ .+++.+|+|+++... ...+.+..|+.+++.+.|+| |+++++++. .+..++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~-~~~~~lv 73 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPY------IVRMIGICE-AESWMLV 73 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCC------cceEEEEEc-CCCcEEE
Confidence 47999999999999753 567899999986532 33466788999999999887 999999875 4578999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.+ +.|+|++|++|+|+|+.|+.+
T Consensus 74 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~a-----------------------l~~lH~~~i~H~dlkp~nill 128 (257)
T cd05116 74 MELAELGPLNKFLQKNK--HVTEKNITELVHQVSMG-----------------------MKYLEETNFVHRDLAARNVLL 128 (257)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecccchhhEEE
Confidence 9999 789999997654 57788888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 129 ~~------------------------------------------------------------------------------ 130 (257)
T cd05116 129 VT------------------------------------------------------------------------------ 130 (257)
T ss_pred cC------------------------------------------------------------------------------
Confidence 61
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
...++|+|||++....... ....+++.|+|||.+....++.++|+|||||++|++++
T Consensus 131 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t 193 (257)
T cd05116 131 -----------------QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS 193 (257)
T ss_pred -----------------CCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHh
Confidence 3458899999886532211 12233578999999887788999999999999999997
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..||.+.+..+.
T Consensus 194 ~g~~p~~~~~~~~~ 207 (257)
T cd05116 194 YGQKPYKGMKGNEV 207 (257)
T ss_pred CCCCCCCCCCHHHH
Confidence 9999987665544
No 225
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=6.5e-29 Score=224.65 Aligned_cols=195 Identities=21% Similarity=0.245 Sum_probs=160.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~ 73 (351)
+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+++++.+.|++ |+++++.+... ..+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHER------IVQYYGCLRDPMERTL 81 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCC------eeeEEeEeccCCCceE
Confidence 57999999999999999999999999985321 22356778999999999888 99999998764 478
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++||||+ +++|.+++.+.. .+++..+..++.|++.+ |.|||+++++|+|+++.|
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~H~dl~p~n 136 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEG-----------------------VSYLHSNMIVHRDIKGAN 136 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCCCCHHH
Confidence 9999999 889999988764 46777778888888777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 137 il~~~--------------------------------------------------------------------------- 141 (265)
T cd06652 137 ILRDS--------------------------------------------------------------------------- 141 (265)
T ss_pred EEecC---------------------------------------------------------------------------
Confidence 87761
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
...++|+|||.+..... ......|+..|+|||.+.+..++.++|+|||||++|+
T Consensus 142 --------------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 201 (265)
T cd06652 142 --------------------VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVE 201 (265)
T ss_pred --------------------CCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHH
Confidence 34588999998764221 1233567889999999988888999999999999999
Q ss_pred eccccccccccCCCce
Q psy2006 307 LYLGITLMARKTKTKY 322 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~ 322 (351)
+++|..||...+....
T Consensus 202 l~~g~~p~~~~~~~~~ 217 (265)
T cd06652 202 MLTEKPPWAEFEAMAA 217 (265)
T ss_pred HhhCCCCCCccchHHH
Confidence 9999999986644433
No 226
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=2.8e-29 Score=230.94 Aligned_cols=195 Identities=23% Similarity=0.342 Sum_probs=163.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh------hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK------YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||.|+||.||+|.+..+++.||+|.+..... ....+..|+.+++.++|+| |+++++++...++.++
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~l 79 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPN------IIGLLDVFGHKSNINL 79 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCC------ChhhhheeecCCEEEE
Confidence 579999999999999988999999999975422 2345668999999999877 9999999999999999
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||||++++|.+++.... ..+++..+..++.|++.+ |.|||++|++|+|++++|+.+
T Consensus 80 v~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~i~H~dl~p~nill 135 (298)
T cd07841 80 VFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRG-----------------------LEYLHSNWILHRDLKPNNLLI 135 (298)
T ss_pred EEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeecCCChhhEEE
Confidence 99999999999997654 367888888888888888 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (298)
T cd07841 136 A------------------------------------------------------------------------------- 136 (298)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.++|+|||++...... .....+++.|+|||.+.+ ..++.++|+||+||+++++++|.
T Consensus 137 ----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~ 200 (298)
T cd07841 137 ----------------SDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200 (298)
T ss_pred ----------------CCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 2356899999988654322 223456788999998865 45688999999999999999998
Q ss_pred ccccccCCCc
Q psy2006 312 TLMARKTKTK 321 (351)
Q Consensus 312 ~pf~~~~~~~ 321 (351)
+||.+.+..+
T Consensus 201 ~~~~~~~~~~ 210 (298)
T cd07841 201 PFLPGDSDID 210 (298)
T ss_pred ccccCCccHH
Confidence 8888766543
No 227
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=3.4e-29 Score=228.63 Aligned_cols=196 Identities=23% Similarity=0.333 Sum_probs=163.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++.||.|+||.||+|++..+++.||+|++.... .....+.+|++++++++|+| |+++++++...+..++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------IVKLLDVIHTENKLYLVF 78 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCC------CcchhhhcccCCcEEEEe
Confidence 367999999999999998899999999997532 12346778999999999887 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||+.++|.+++.......+++..+..++.|++.| |+|||+.+++|+|+++.|+.+.
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~-----------------------l~~lh~~~i~H~~l~p~nill~- 134 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQG-----------------------LAFCHSHRVLHRDLKPQNLLIN- 134 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEEC-
Confidence 9998899999887655568888888888888888 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (284)
T cd07860 135 -------------------------------------------------------------------------------- 134 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCC-CCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||.+..... ......+++.|+|||.+.+.. ++.++|+|||||++|+++||..|
T Consensus 135 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p 200 (284)
T cd07860 135 --------------TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 200 (284)
T ss_pred --------------CCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 234689999998764322 122345678899999987654 58889999999999999999999
Q ss_pred ccccCCC
Q psy2006 314 MARKTKT 320 (351)
Q Consensus 314 f~~~~~~ 320 (351)
|.+.+..
T Consensus 201 ~~~~~~~ 207 (284)
T cd07860 201 FPGDSEI 207 (284)
T ss_pred CCCCCHH
Confidence 9876543
No 228
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=4.3e-29 Score=227.96 Aligned_cols=194 Identities=25% Similarity=0.385 Sum_probs=159.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+||.||+|+++.+++.||+|++.... ...+.+.+|+.+++.+.|+| |++++++|....+.++|||
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPN------LVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCC------EeeeeeEEeeCCEEEEEEe
Confidence 57999999999999998899999999986432 22345678999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ ++.|..++... ..+++..++.++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~-----------------------l~~LH~~~i~H~dl~p~nil~~- 134 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQA-----------------------VNFCHKHNCIHRDVKPENILIT- 134 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceecCCChhhEEEc-
Confidence 99 55555554433 257888888888888888 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (286)
T cd07847 135 -------------------------------------------------------------------------------- 134 (286)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||++...... .....++..|+|||.+.+ ..++.++|+||+||+++++++|.+|
T Consensus 135 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p 200 (286)
T cd07847 135 --------------KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL 200 (286)
T ss_pred --------------CCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 2346899999998754322 223567789999999876 4578899999999999999999999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|.+.+..+
T Consensus 201 ~~~~~~~~ 208 (286)
T cd07847 201 WPGKSDVD 208 (286)
T ss_pred CCCCChHH
Confidence 98776543
No 229
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=4.1e-29 Score=226.35 Aligned_cols=196 Identities=22% Similarity=0.294 Sum_probs=161.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC------eEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG------HMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~------~~~ 74 (351)
+.||.|+||.||+|.+..+++.+|+|++.......+.+.+|+.+++++ .|+| |+++++.|.... +++
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~------i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPN------IATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCC------hheEEEEEEecCCCCcceEEE
Confidence 679999999999999988999999999987655556788999999998 5766 999999997654 599
Q ss_pred EEEecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 75 IAFEIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+||||+ +++|.+++.... ...+++..++.++.|++.+ |.|||+.+++|+|+++.
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~a-----------------------l~~lH~~~i~H~~l~p~ 142 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRG-----------------------LAYLHENKVIHRDIKGQ 142 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHhcCCcccCCCCHH
Confidence 999999 889999987643 3467788888888888877 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.+
T Consensus 143 ni~~~~-------------------------------------------------------------------------- 148 (275)
T cd06608 143 NILLTK-------------------------------------------------------------------------- 148 (275)
T ss_pred HEEEcc--------------------------------------------------------------------------
Confidence 998862
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-----CCCCCccceeeeeee
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-----LGWAQPCDVWSIGCI 303 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~~ 303 (351)
...++|+|||++..... ......|++.|+|||.+.. ..++.++|+||+||+
T Consensus 149 ---------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i 207 (275)
T cd06608 149 ---------------------NAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGIT 207 (275)
T ss_pred ---------------------CCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHH
Confidence 34689999998765322 2234568889999998753 245788999999999
Q ss_pred eEeeccccccccccCCCc
Q psy2006 304 IFELYLGITLMARKTKTK 321 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~~~ 321 (351)
++++++|..||......+
T Consensus 208 l~~l~~g~~p~~~~~~~~ 225 (275)
T cd06608 208 AIELADGKPPLCDMHPMR 225 (275)
T ss_pred HHHHHhCCCCccccchHH
Confidence 999999999997654433
No 230
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=7.2e-29 Score=223.45 Aligned_cols=195 Identities=21% Similarity=0.277 Sum_probs=164.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|+||.||+|.+..+++.+|+|++.... ...+.+.+|+.+++.++|++ |+++++.+...+.+|+||||+
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPN------IVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCC------hhceEEEEEeCCEEEEEEeCC
Confidence 57999999999999998899999999997642 34567889999999999888 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.... ..+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.+
T Consensus 83 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~-----------------------l~~lh~~~i~h~dl~p~ni~i~~-- 136 (262)
T cd06613 83 GGGSLQDIYQVTR-GPLSELQIAYVCRETLKG-----------------------LAYLHETGKIHRDIKGANILLTE-- 136 (262)
T ss_pred CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCceecCCChhhEEECC--
Confidence 789999887753 357777788888877777 99999999999999999998762
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (262)
T cd06613 137 -------------------------------------------------------------------------------- 136 (262)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC---CCCCccceeeeeeeeEeecccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL---GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
.+.++|+|||.+..... ......++..|+|||.+.+. .++.++|+||+||++++|++|.+|
T Consensus 137 -------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p 203 (262)
T cd06613 137 -------------DGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP 203 (262)
T ss_pred -------------CCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 34689999998765322 22345678899999998776 788899999999999999999999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|...+..+
T Consensus 204 ~~~~~~~~ 211 (262)
T cd06613 204 MFDLHPMR 211 (262)
T ss_pred CCCCCHHH
Confidence 98765444
No 231
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=9.6e-29 Score=223.04 Aligned_cols=189 Identities=22% Similarity=0.293 Sum_probs=163.2
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|++ |+++++.+..+.+.|+||||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPF------IVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCC------EeeeeeeEEcCCccEEEEec
Confidence 799999999999998889999999997532 33456888999999999877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.+.. .+++..+..++.|++.+ |.|+|+.+++|+|+++.|+.+.
T Consensus 75 ~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~-----------------------l~~lH~~~~~h~dl~~~nilv~-- 127 (262)
T cd05572 75 CLGGELWTILRDRG--LFDEYTARFYIACVVLA-----------------------FEYLHNRGIIYRDLKPENLLLD-- 127 (262)
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHhhCCcccCCCCHHHEEEc--
Confidence 9 899999998764 47888888888888888 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (262)
T cd05572 128 -------------------------------------------------------------------------------- 127 (262)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc--cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH--HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||.+...... .....+++.|++||.+.+..++.++|+||+|+++|++++|..||..
T Consensus 128 -------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 128 -------------SNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred -------------CCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 2346899999988654322 2345678899999998888889999999999999999999999987
Q ss_pred cC
Q psy2006 317 KT 318 (351)
Q Consensus 317 ~~ 318 (351)
.+
T Consensus 195 ~~ 196 (262)
T cd05572 195 DD 196 (262)
T ss_pred CC
Confidence 76
No 232
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.96 E-value=8.1e-29 Score=223.74 Aligned_cols=193 Identities=21% Similarity=0.276 Sum_probs=163.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||.|+||.||+|.+..+++.||+|.+... ....+.+.+|+.+++.+.|++ |+++++.|...+..++||
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~------i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPN------VIKYLASFIENNELNIVL 81 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCC------eeeeeeeeecCCeEEEEE
Confidence 6799999999999999889999999998632 233567789999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 78 EIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||+ +++|.+++.... ...+++..+..++.|++.+ +.|||+.|++|+|+++.|+.
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~dl~p~nil 138 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSA-----------------------LEHMHSKRIMHRDIKPANVF 138 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCCcChhhEE
Confidence 999 889999987532 2346778888888888887 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 139 ~~------------------------------------------------------------------------------ 140 (267)
T cd08224 139 IT------------------------------------------------------------------------------ 140 (267)
T ss_pred EC------------------------------------------------------------------------------
Confidence 86
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++|+|||++..... ......+++.|+|||.+.+..++.++|+||+||++|++++|.
T Consensus 141 -----------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~ 203 (267)
T cd08224 141 -----------------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred -----------------CCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCC
Confidence 234689999998765322 223456788999999998888999999999999999999999
Q ss_pred ccccccC
Q psy2006 312 TLMARKT 318 (351)
Q Consensus 312 ~pf~~~~ 318 (351)
.||....
T Consensus 204 ~p~~~~~ 210 (267)
T cd08224 204 SPFYGDK 210 (267)
T ss_pred CCcccCC
Confidence 9997654
No 233
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=6e-29 Score=225.68 Aligned_cols=198 Identities=18% Similarity=0.202 Sum_probs=155.1
Q ss_pred ccccCcccceEEEEEEeecCc--EEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS--VVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|.+..++. .+|+|.+... ....+.+.+|+.+++++ .|+| |+++++++...+..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv~~~~~~~~~~~~~lv 74 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN------IINLLGACEHRGYLYLA 74 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCC------eeeEEEEEecCCCceEE
Confidence 479999999999999887765 5688888742 33445778899999999 5666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 77 FEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
|||+ +++|.+++..... ..+++..+..++.|++.| ++|||+.
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~a-----------------------l~~lH~~ 131 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG-----------------------MDYLSQK 131 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHH-----------------------HHHHHHC
Confidence 9999 8999999976531 124455555555555555 9999999
Q ss_pred cccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
|++|+|+|+.|+.+.
T Consensus 132 ~i~H~dikp~nili~----------------------------------------------------------------- 146 (270)
T cd05047 132 QFIHRDLAARNILVG----------------------------------------------------------------- 146 (270)
T ss_pred CEeecccccceEEEc-----------------------------------------------------------------
Confidence 999999999999876
Q ss_pred CCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecccc--ccccccceeeCceeeecCCCCCccceee
Q psy2006 222 DKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
....++++|||++....... .....+..|+|||++....++.++|+||
T Consensus 147 ------------------------------~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~s 196 (270)
T cd05047 147 ------------------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 196 (270)
T ss_pred ------------------------------CCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHH
Confidence 23468999999875322111 1122356799999998888899999999
Q ss_pred eeeeeEeecc-ccccccccCCCcee
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
|||+++++++ |..||.+.+..+.+
T Consensus 197 lG~il~el~~~g~~pf~~~~~~~~~ 221 (270)
T cd05047 197 YGVLLWEIVSLGGTPYCGMTCAELY 221 (270)
T ss_pred HHHHHHHHHcCCCCCccccCHHHHH
Confidence 9999999996 99999876655443
No 234
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=3.8e-29 Score=225.31 Aligned_cols=196 Identities=18% Similarity=0.245 Sum_probs=160.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++.||+|+||+||+|.+. .+..+|+|.+.......+.+.+|+.+++.+.|+| |+++++++...+..++||||+
T Consensus 9 ~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 9 LKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEK------LVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred eeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCC------eeeEEEEEccCCCcEEEEEcC
Confidence 357999999999999863 4556999998765444567889999999999877 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++..... .+++..+..++.|++.| |.|||+.|++|+|++++|+.+.+
T Consensus 82 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~nili~~-- 135 (256)
T cd05113 82 SNGCLLNYLREHGK-RFQPSQLLEMCKDVCEG-----------------------MAYLESKQFIHRDLAARNCLVDD-- 135 (256)
T ss_pred CCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccccCcceEEEcC--
Confidence 8899999977542 57888888888888888 99999999999999999998762
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (256)
T cd05113 136 -------------------------------------------------------------------------------- 135 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecccc-c---cccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-S---TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf 314 (351)
...+||+|||.+....... . ...++..|++||.+.+..++.++|+|||||++|++++ |..||
T Consensus 136 -------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~ 202 (256)
T cd05113 136 -------------QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202 (256)
T ss_pred -------------CCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCc
Confidence 2468999999876432111 1 1234567999999988888999999999999999998 99999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
...+..+.
T Consensus 203 ~~~~~~~~ 210 (256)
T cd05113 203 ERFNNSET 210 (256)
T ss_pred CcCCHHHH
Confidence 87665443
No 235
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=4.9e-29 Score=229.25 Aligned_cols=196 Identities=21% Similarity=0.278 Sum_probs=164.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++.||.|+||+||+|.+..+++.||+|.+... ....+.+.+|+.+++.++|++ |+++++.|...+..|+|+||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~------i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPN------IVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCC------eeehhheeeeCCcEEEEEec
Confidence 36799999999999999889999999999643 233456788999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.+. .+++..+..++.|++.+ +.|||++|++|+|+++.|+.+.
T Consensus 98 ~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~a-----------------------l~~LH~~gi~H~dL~p~Nili~-- 149 (293)
T cd06647 98 LAGGSLTDVVTET---CMDEGQIAAVCRECLQA-----------------------LEFLHSNQVIHRDIKSDNILLG-- 149 (293)
T ss_pred CCCCcHHHHHhhc---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeeccCCHHHEEEc--
Confidence 9 89999998764 36777777777777777 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 150 -------------------------------------------------------------------------------- 149 (293)
T cd06647 150 -------------------------------------------------------------------------------- 149 (293)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++|+|||++.... .......+++.|++||.+.+..++.++|+|||||++|++++|..||.
T Consensus 150 -------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~ 216 (293)
T cd06647 150 -------------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (293)
T ss_pred -------------CCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 13458999999775422 12234567889999999988888999999999999999999999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
..+..+..
T Consensus 217 ~~~~~~~~ 224 (293)
T cd06647 217 NENPLRAL 224 (293)
T ss_pred CCChhhhe
Confidence 77654443
No 236
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=1.1e-29 Score=233.55 Aligned_cols=193 Identities=20% Similarity=0.314 Sum_probs=162.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
.+||.|+||.||++.+..+++.||||.+... ....+.+.+|+.+++.++|+| |+++++.+...++.|+||||+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~------ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHEN------VVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCc------HHHHHHheecCCeEEEEEeCC
Confidence 4799999999999999889999999998653 233456788999999999887 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ ++|||+++++|+|+++.|+.+.
T Consensus 102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~-----------------------l~~LH~~~ivH~dlkp~Nill~--- 152 (292)
T cd06658 102 EGGALTDIVTHT---RMNEEQIATVCLSVLRA-----------------------LSYLHNQGVIHRDIKSDSILLT--- 152 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecCCCHHHEEEc---
Confidence 88999887543 46777777777777777 9999999999999999999886
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 153 -------------------------------------------------------------------------------- 152 (292)
T cd06658 153 -------------------------------------------------------------------------------- 152 (292)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||++..... ......|++.|+|||.+.+..++.++|+||+|++++++++|..||..
T Consensus 153 ------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 220 (292)
T cd06658 153 ------------SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 220 (292)
T ss_pred ------------CCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 134689999998764221 22345678899999999888889999999999999999999999987
Q ss_pred cCCCc
Q psy2006 317 KTKTK 321 (351)
Q Consensus 317 ~~~~~ 321 (351)
.+..+
T Consensus 221 ~~~~~ 225 (292)
T cd06658 221 EPPLQ 225 (292)
T ss_pred CCHHH
Confidence 65543
No 237
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=1.2e-28 Score=226.14 Aligned_cols=198 Identities=20% Similarity=0.290 Sum_probs=155.8
Q ss_pred ccccCcccceEEEEEEeec-----CcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-----DSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+.||+|+||.||+|.+... ...+|+|.+... ......+.+|+.+++.+ +|+| |+++++++..++..
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------i~~~~~~~~~~~~~ 91 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN------IINLLGVCTQEGPL 91 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCC------eeeEEEEEcCCCCe
Confidence 5799999999999997643 378999999753 22334577899999999 6777 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcC--------------CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcc
Q psy2006 74 CIAFEIL-GLSVFDFLKENN--------------YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYN 138 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~--------------~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 138 (351)
++||||+ +++|.++++... ...+++..+..++.|++.| |+||
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a-----------------------l~~L 148 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARG-----------------------MEFL 148 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH-----------------------HHHH
Confidence 9999999 899999997642 1234444555555555555 9999
Q ss_pred ccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcC
Q psy2006 139 NKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRH 218 (351)
Q Consensus 139 H~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~ 218 (351)
|+.+++|+|+|+.|+.+.+
T Consensus 149 H~~~ivH~dlkp~Nil~~~------------------------------------------------------------- 167 (293)
T cd05053 149 ASKKCIHRDLAARNVLVTE------------------------------------------------------------- 167 (293)
T ss_pred HHCCccccccceeeEEEcC-------------------------------------------------------------
Confidence 9999999999999998862
Q ss_pred CCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCC
Q psy2006 219 PFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQ 293 (351)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~ 293 (351)
...++|+|||.+...... .....++..|+|||.+.+..++.
T Consensus 168 ----------------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 213 (293)
T cd05053 168 ----------------------------------DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTH 213 (293)
T ss_pred ----------------------------------CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCc
Confidence 346899999988653221 11223456799999998888999
Q ss_pred ccceeeeeeeeEeecc-ccccccccCCCcee
Q psy2006 294 PCDVWSIGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 294 ~~DiwslG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
++|+|||||++|++++ |..||.+.+..+.+
T Consensus 214 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 214 QSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred ccceeehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 9999999999999997 99999877655544
No 238
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=3.4e-29 Score=232.03 Aligned_cols=200 Identities=20% Similarity=0.307 Sum_probs=162.2
Q ss_pred ccccCcccceEEEEEEee--cCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeE
Q psy2006 2 CSLNCVASNHVCTNVVYE--VDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~ 73 (351)
++||+|+||.||+|.+.. +++.||+|++.... ...+...+|+.+++.++|+| |+++++++... .++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHEN------VVSLVEVFLEHADKSV 79 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCC------ccceEEEEeCCCCceE
Confidence 579999999999999988 89999999997632 23456778999999999887 99999999988 799
Q ss_pred EEEEeccCCCHHHHHHhcCC---CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 74 CIAFEILGLSVFDFLKENNY---LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~~~---~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
|+||||++++|.+++..... ..+++..++.++.|++.+ ++|||+++++|||+++
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~-----------------------l~~lH~~~i~h~dlkp 136 (316)
T cd07842 80 YLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNG-----------------------VHYLHSNWVLHRDLKP 136 (316)
T ss_pred EEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeeCCCCH
Confidence 99999998899888765421 256777777777777777 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.. .
T Consensus 137 ~Nil~~~-----------~------------------------------------------------------------- 144 (316)
T cd07842 137 ANILVMG-----------E------------------------------------------------------------- 144 (316)
T ss_pred HHEEEcC-----------C-------------------------------------------------------------
Confidence 9998761 0
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecC-CCCCccceeeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCI 303 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~ 303 (351)
......+||+|||++...... .....+++.|+|||.+.+. .++.++|+|||||+
T Consensus 145 -------------------~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 205 (316)
T cd07842 145 -------------------GPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCI 205 (316)
T ss_pred -------------------CCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHH
Confidence 002467999999988653221 1234678899999988764 57889999999999
Q ss_pred eEeeccccccccccCCCc
Q psy2006 304 IFELYLGITLMARKTKTK 321 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~~~ 321 (351)
++++++|.+||.+.+...
T Consensus 206 l~~l~~~~~~~~~~~~~~ 223 (316)
T cd07842 206 FAELLTLEPIFKGREAKI 223 (316)
T ss_pred HHHHHhcCCCCcCCcccc
Confidence 999999999998776543
No 239
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.96 E-value=7.8e-29 Score=224.73 Aligned_cols=197 Identities=13% Similarity=0.132 Sum_probs=154.7
Q ss_pred ccccCcccceEEEEEEe--ecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVY--EVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||+|.+. .++..+|+|.+.... .....+.+|+.+++.++|+| |+++++++......++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~ 74 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSN------LLQCLGQCTEVTPYLLVM 74 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCC------EeeEEEEEcCCCCcEEEE
Confidence 57999999999999864 345789999987532 22346778999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCC---CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 78 EIL-GLSVFDFLKENNY---LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~---~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
||+ +++|.+++..... ...++..++.++.|++.+ +.|||+.+++|+|+|+.|+
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~i~H~dlkp~ni 131 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALG-----------------------LLHLHKNNFIHSDLALRNC 131 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHH-----------------------HHHHHHCCEeccccCcceE
Confidence 999 8999999976431 234455666667777766 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 132 l~~----------------------------------------------------------------------------- 134 (269)
T cd05087 132 LLT----------------------------------------------------------------------------- 134 (269)
T ss_pred EEc-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecC-------CCCCccceeeee
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILEL-------GWAQPCDVWSIG 301 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslG 301 (351)
....++|+|||.+..... ......+++.|+|||++.+. .++.++|+||+|
T Consensus 135 ------------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 135 ------------------ADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred ------------------CCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 134689999998754221 11234567889999988642 357899999999
Q ss_pred eeeEeecc-ccccccccCCCce
Q psy2006 302 CIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 302 ~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
|++|++++ |..||...+..+.
T Consensus 197 ~~l~el~~~g~~p~~~~~~~~~ 218 (269)
T cd05087 197 VTIWELFELGSQPYRHLSDEQV 218 (269)
T ss_pred HHHHHHHhCCCCCCCCCChHHH
Confidence 99999996 9999977665543
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=5.5e-29 Score=225.50 Aligned_cols=193 Identities=21% Similarity=0.295 Sum_probs=158.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
..||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|+| |+++++++..+++.++|+||+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN------IVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCC------eeeeeeeeccCCEEEEEEecC
Confidence 36999999999999998899999999987542 34557889999999999888 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCC--chHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 81 -GLSVFDFLKENNYLPY--SLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~--~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
+++|.+++.... ..+ ++..+..++.|++.+ +.|||+++++|+|+++.|+.+.+
T Consensus 88 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~i~h~dl~p~nil~~~ 143 (268)
T cd06624 88 PGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEG-----------------------LKYLHDNQIVHRDIKGDNVLVNT 143 (268)
T ss_pred CCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecCCCHHHEEEcC
Confidence 899999998653 123 566666667777766 99999999999999999998751
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 144 -------------------------------------------------------------------------------- 143 (268)
T cd06624 144 -------------------------------------------------------------------------------- 143 (268)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceec---cccccccccceeeCceeeecC--CCCCccceeeeeeeeEeeccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||.+.... .......|++.|+|||.+... .++.++|+||+|++++++++|..
T Consensus 144 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~ 209 (268)
T cd06624 144 --------------YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKP 209 (268)
T ss_pred --------------CCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCC
Confidence 12468999999876432 122334678899999998654 37889999999999999999999
Q ss_pred cccccC
Q psy2006 313 LMARKT 318 (351)
Q Consensus 313 pf~~~~ 318 (351)
||....
T Consensus 210 p~~~~~ 215 (268)
T cd06624 210 PFIELG 215 (268)
T ss_pred CCcccc
Confidence 997644
No 241
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=6.9e-29 Score=225.70 Aligned_cols=198 Identities=16% Similarity=0.209 Sum_probs=158.7
Q ss_pred ccccCcccceEEEEEEeec-----CcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-----DSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++||+|+||.||+|.+... ++.||+|.+.... .....+.+|+.+++.+.|++ |+++++++....+.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~ 85 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHH------VVRLLGVVSTGQPTL 85 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCc------eeEEEEEEcCCCCcE
Confidence 5799999999999998643 4899999987432 23346778999999998877 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCC--------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY--------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREV 145 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~--------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 145 (351)
+||||+ +++|.+++..... ..+++..+..++.|++.| |.|||+.+++|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H 142 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG-----------------------MAYLAAKKFVH 142 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccc
Confidence 999999 8999999976431 124455566666666666 99999999999
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
+|+++.|+.+.+
T Consensus 143 ~di~p~nill~~-------------------------------------------------------------------- 154 (277)
T cd05032 143 RDLAARNCMVAE-------------------------------------------------------------------- 154 (277)
T ss_pred cccChheEEEcC--------------------------------------------------------------------
Confidence 999999998862
Q ss_pred chhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeee
Q psy2006 226 SSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
...++|+|||++..... ......++..|+|||.+.+..++.++|+|||
T Consensus 155 ---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 207 (277)
T cd05032 155 ---------------------------DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSF 207 (277)
T ss_pred ---------------------------CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHH
Confidence 34689999998764221 1223456778999999988888999999999
Q ss_pred eeeeEeecc-ccccccccCCCcee
Q psy2006 301 GCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 301 G~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
||++|++++ |..||...+..+.+
T Consensus 208 G~il~el~t~g~~p~~~~~~~~~~ 231 (277)
T cd05032 208 GVVLWEMATLAEQPYQGLSNEEVL 231 (277)
T ss_pred HHHHHHhhccCCCCCccCCHHHHH
Confidence 999999998 99999877655543
No 242
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=1.2e-28 Score=224.56 Aligned_cols=201 Identities=16% Similarity=0.103 Sum_probs=158.0
Q ss_pred ccccCcccceEEEEEEeec------------------------CcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCC
Q psy2006 2 CSLNCVASNHVCTNVVYEV------------------------DSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNG 56 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~------------------------~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g 56 (351)
.+||+|+||.||+|....+ ...||+|++.... .....+.+|+.+++.++|+|
T Consensus 1 ~~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n--- 77 (274)
T cd05076 1 AHLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIH--- 77 (274)
T ss_pred CCcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCC---
Confidence 3799999999999985432 2468999986532 22345677899999999888
Q ss_pred CcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhh
Q psy2006 57 RHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAV 135 (351)
Q Consensus 57 ~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l 135 (351)
|+++++++..+...++||||+ +++|.+++.... ..+++..+..++.|++.| |
T Consensus 78 ---iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~-----------------------l 130 (274)
T cd05076 78 ---LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASA-----------------------L 130 (274)
T ss_pred ---eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------H
Confidence 999999999999999999999 889988887643 357788888888888888 9
Q ss_pred hccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhh
Q psy2006 136 DYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEA 215 (351)
Q Consensus 136 ~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~ 215 (351)
+|||+++++|||+|+.|+.+.+.|....
T Consensus 131 ~~lH~~~iiH~dlkp~Nill~~~~~~~~---------------------------------------------------- 158 (274)
T cd05076 131 SYLEDKNLVHGNVCAKNILLARLGLAEG---------------------------------------------------- 158 (274)
T ss_pred HHHHcCCccCCCCCcccEEEeccCcccC----------------------------------------------------
Confidence 9999999999999999999885443200
Q ss_pred hcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCc
Q psy2006 216 LRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQP 294 (351)
Q Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~ 294 (351)
....++++|||.+..... .....+++.|+|||.+.+ ..++.+
T Consensus 159 ------------------------------------~~~~~kl~d~g~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~ 201 (274)
T cd05076 159 ------------------------------------TSPFIKLSDPGVSFTALS-REERVERIPWIAPECVPGGNSLSTA 201 (274)
T ss_pred ------------------------------------ccceeeecCCcccccccc-ccccccCCcccCchhhcCCCCCCcH
Confidence 123478999998754221 223456788999998875 457899
Q ss_pred cceeeeeeeeEeec-cccccccccCCCc
Q psy2006 295 CDVWSIGCIIFELY-LGITLMARKTKTK 321 (351)
Q Consensus 295 ~DiwslG~~l~~l~-tG~~pf~~~~~~~ 321 (351)
+|+|||||++|+++ +|..||...+..+
T Consensus 202 ~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 202 ADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999984 7999998766544
No 243
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=8.9e-29 Score=222.76 Aligned_cols=194 Identities=16% Similarity=0.226 Sum_probs=158.6
Q ss_pred ccccCcccceEEEEEEeecC---cEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVD---SVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||+|+||.||+|++...+ ..||+|.+..... ..+.+.+|+++++.+.|++ |+++++++. ..+.++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPC------IVRLIGVCK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCC------eeeEEEEEc-CCceEEE
Confidence 57999999999999876554 7999999975432 4456788999999998877 999999876 4578999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... .+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+
T Consensus 74 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~-----------------------l~~lh~~~i~H~di~p~nili 128 (257)
T cd05060 74 MELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMG-----------------------MAYLESKHFVHRDLAARNVLL 128 (257)
T ss_pred EEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHH-----------------------HHHHhhcCeeccCcccceEEE
Confidence 9999 889999998765 57788888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 129 ~~------------------------------------------------------------------------------ 130 (257)
T cd05060 129 VN------------------------------------------------------------------------------ 130 (257)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccc------cccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS------TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
...++|+|||.+........ ...++..|+|||.+.+..++.++|+|||||++|++++
T Consensus 131 -----------------~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~ 193 (257)
T cd05060 131 -----------------RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193 (257)
T ss_pred -----------------CCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence 34689999998765322211 1122357999999988889999999999999999998
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..||...+..+.
T Consensus 194 ~g~~p~~~~~~~~~ 207 (257)
T cd05060 194 YGAKPYGEMKGAEV 207 (257)
T ss_pred CCCCCcccCCHHHH
Confidence 9999987665543
No 244
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96 E-value=6.9e-29 Score=224.49 Aligned_cols=194 Identities=20% Similarity=0.329 Sum_probs=162.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
..||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|++ |+++++++...+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~ 79 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN------IVQYLGSSLDAD 79 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCC------eeeEEEEEEeCC
Confidence 46999999999999998899999999986421 11245778999999999887 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
+.++||||+ +++|.+++.... .+++..++.++.|++.+ |+|||+.|++|+|+++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~-----------------------l~~lH~~~ivH~di~p 134 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKG-----------------------LNYLHNRGIIHRDIKG 134 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHH-----------------------HHHHHhcCcccccCCH
Confidence 999999999 889999998764 57788888888888888 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+
T Consensus 135 ~nil~~~------------------------------------------------------------------------- 141 (267)
T cd06628 135 ANILVDN------------------------------------------------------------------------- 141 (267)
T ss_pred HHEEEcC-------------------------------------------------------------------------
Confidence 9987762
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc---------ccccccccceeeCceeeecCCCCCccceeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIG 301 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 301 (351)
...++|+|||.+..... ......|+..|+|||.+.+..++.++|+||+|
T Consensus 142 ----------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG 199 (267)
T cd06628 142 ----------------------KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLG 199 (267)
T ss_pred ----------------------CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHH
Confidence 34588889988754321 11224577899999999888889999999999
Q ss_pred eeeEeeccccccccccCCCc
Q psy2006 302 CIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 302 ~~l~~l~tG~~pf~~~~~~~ 321 (351)
|+++++++|..||...+..+
T Consensus 200 ~il~~l~~g~~p~~~~~~~~ 219 (267)
T cd06628 200 CLVVEMLTGKHPFPDCTQLQ 219 (267)
T ss_pred HHHHHHhhCCCCCCCccHHH
Confidence 99999999999998765543
No 245
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=4e-29 Score=228.17 Aligned_cols=212 Identities=13% Similarity=0.209 Sum_probs=155.9
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++||.|+||+||+|.+.. .++.||+|++.... ...+.+..|+.+++.+.|+| |+++++++...+..+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~------iv~~~~~~~~~~~~~ 84 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN------IVCLLGVVTKEQPLS 84 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCC------cCeEEEEEcCCCceE
Confidence 679999999999998753 35789999997532 23456788999999999887 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+++||+ +++|.+++....... ...... . .......++...+..++.|++.||+|+|++|++|||+|+.|+
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~-~~~~~~-------~-~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Ni 155 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHS-DVGSTD-------D-DKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNV 155 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCc-cccccc-------c-ccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhhe
Confidence 999999 889999986432100 000000 0 000001233334444444555559999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.|
T Consensus 156 l~~~---------------------------------------------------------------------------- 159 (283)
T cd05091 156 LVFD---------------------------------------------------------------------------- 159 (283)
T ss_pred EecC----------------------------------------------------------------------------
Confidence 8762
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
...+||+|||++..... ......+++.|+|||.+.+..++.++|+||+||++++++
T Consensus 160 -------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 220 (283)
T cd05091 160 -------------------KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVF 220 (283)
T ss_pred -------------------CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence 24589999998764211 112344567899999998888999999999999999999
Q ss_pred c-ccccccccCCCcee
Q psy2006 309 L-GITLMARKTKTKYF 323 (351)
Q Consensus 309 t-G~~pf~~~~~~~~~ 323 (351)
+ |..||.+.+..+.+
T Consensus 221 ~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 221 SYGLQPYCGYSNQDVI 236 (283)
T ss_pred cCCCCCCCCCCHHHHH
Confidence 8 89999887665544
No 246
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=7.1e-29 Score=223.16 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=162.9
Q ss_pred ccccCcccceEEEEEEee-cC--cEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-VD--SVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-~~--~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.|+||.||+|.+.. .+ ..||+|.+.... ...+.+.+|+++++++.|+| |+++++.+.. ...++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHEN------LIRLYGVVLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCC------ccceeEEEcC-CeEEEE
Confidence 579999999999999865 33 369999997643 34567789999999999887 9999999988 899999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.......+++..+..++.|++.| |.|||+++++|+|+++.|+.+
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~i~H~di~p~nil~ 130 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANG-----------------------MRYLESKRFIHRDLAARNILL 130 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHH-----------------------HHHHHhCCccccccCcccEEE
Confidence 9999 8999999987643457777888888888877 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 131 ~------------------------------------------------------------------------------- 131 (257)
T cd05040 131 A------------------------------------------------------------------------------- 131 (257)
T ss_pred e-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
..+.+||+|||.+...... .....++..|+|||.+.+..++.++|+|||||++++|++
T Consensus 132 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t 195 (257)
T cd05040 132 ----------------SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195 (257)
T ss_pred ----------------cCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHh
Confidence 2356899999987653221 123456778999999988889999999999999999998
Q ss_pred -ccccccccCCCcee
Q psy2006 310 -GITLMARKTKTKYF 323 (351)
Q Consensus 310 -G~~pf~~~~~~~~~ 323 (351)
|..||...+..+.+
T Consensus 196 ~g~~p~~~~~~~~~~ 210 (257)
T cd05040 196 YGEEPWAGLSGSQIL 210 (257)
T ss_pred CCCCCCCCCCHHHHH
Confidence 99999877665544
No 247
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=5.4e-29 Score=227.21 Aligned_cols=197 Identities=22% Similarity=0.359 Sum_probs=163.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|++|.||+|++..+++.||+|++.... ...+.+.+|+.+++.+.|+| |+++++++...++.++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHEN------IVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCC------EeeeeeeEeeCCcEEEEEe
Confidence 368999999999999998899999999997542 22356678999999998877 9999999999999999999
Q ss_pred ccCCCHHHHHHhcC-CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 ILGLSVFDFLKENN-YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~g~sL~~~l~~~~-~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+.++|.+++.... ...+++..+..++.|++.+ |+|||+.|++|+|+++.|+.+.+
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~h~dl~p~ni~~~~ 135 (284)
T cd07836 79 YMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKG-----------------------IAFCHENRVLHRDLKPQNLLINK 135 (284)
T ss_pred cCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeCCCCHHHEEECC
Confidence 99889999887653 2357788888888888887 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (284)
T cd07836 136 -------------------------------------------------------------------------------- 135 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++++|||.+..... ......+++.|++||.+.+. .++.++|+||+||+++++++|..|
T Consensus 136 ---------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~ 200 (284)
T cd07836 136 ---------------RGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPL 200 (284)
T ss_pred ---------------CCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 34689999998764322 12334567889999988764 468899999999999999999999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|.+.+..+
T Consensus 201 ~~~~~~~~ 208 (284)
T cd07836 201 FPGTNNED 208 (284)
T ss_pred CCCCCcHH
Confidence 98776544
No 248
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=7.3e-29 Score=227.32 Aligned_cols=197 Identities=18% Similarity=0.241 Sum_probs=158.0
Q ss_pred ccccCcccceEEEEEEe-----ecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||+|+||+||++.+. .++..+|+|.+... ....+.+.+|+.+++.+.|++ |+++++++...+..++
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~l 84 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH------IVKFYGVCVEGDPLIM 84 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCC------cceEEEEEecCCccEE
Confidence 57999999999999853 35677999999753 334557889999999999877 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCC-----------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccc
Q psy2006 76 AFEIL-GLSVFDFLKENNY-----------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKR 143 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~-----------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 143 (351)
||||+ +++|.+++..... ..+++..+..++.|++.+ |+|||++|+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~a-----------------------L~~lH~~~i 141 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG-----------------------MVYLASQHF 141 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCe
Confidence 99999 8999999976531 135555666666666655 999999999
Q ss_pred cccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 144 EVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 144 ~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
+|||+||.|+.+.+
T Consensus 142 ~H~dlkp~Nili~~------------------------------------------------------------------ 155 (288)
T cd05093 142 VHRDLATRNCLVGE------------------------------------------------------------------ 155 (288)
T ss_pred eecccCcceEEEcc------------------------------------------------------------------
Confidence 99999999998762
Q ss_pred CCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCcccee
Q psy2006 224 LPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVW 298 (351)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diw 298 (351)
...++|+|||++...... .....+++.|+|||.+.+..++.++|+|
T Consensus 156 -----------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw 206 (288)
T cd05093 156 -----------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206 (288)
T ss_pred -----------------------------CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHH
Confidence 346899999987643211 1233456789999999888889999999
Q ss_pred eeeeeeEeecc-ccccccccCCCce
Q psy2006 299 SIGCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 299 slG~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
||||++++|++ |..||...+..+.
T Consensus 207 slG~il~~l~t~g~~p~~~~~~~~~ 231 (288)
T cd05093 207 SLGVVLWEIFTYGKQPWYQLSNNEV 231 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999998 9999987665443
No 249
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=5.8e-29 Score=224.25 Aligned_cols=197 Identities=20% Similarity=0.210 Sum_probs=164.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
++||.|+||+||+|.+. .++.||+|.+.......+.+.+|+.+++.+.|++ |+++++++......++||||+
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 12 RKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK------LVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred eeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCC------EeeeeeeeecCCceEEEEeccC
Confidence 57999999999999974 5688999999865555677889999999999877 999999999989999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......+++..+..++.|++.+ +.|||+.+++|+|++++|+.+.+
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~a-----------------------l~~lh~~~i~h~di~p~nili~~--- 138 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEG-----------------------MAYLESRNYIHRDLAARNILVGE--- 138 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCcchheEEEcC---
Confidence 8899999987654567888888888888888 99999999999999999998862
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 139 -------------------------------------------------------------------------------- 138 (261)
T cd05034 139 -------------------------------------------------------------------------------- 138 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
...++++|||.+....... ....++..|+|||.+.+..++.++|+||+||+++++++ |..||.
T Consensus 139 ------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 206 (261)
T cd05034 139 ------------NLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYP 206 (261)
T ss_pred ------------CCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 3468999999876532211 12233567999999988888999999999999999998 999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+.+
T Consensus 207 ~~~~~~~~ 214 (261)
T cd05034 207 GMTNREVL 214 (261)
T ss_pred CCCHHHHH
Confidence 77655544
No 250
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.96 E-value=6.8e-29 Score=224.52 Aligned_cols=193 Identities=20% Similarity=0.255 Sum_probs=162.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||.||+|.+..+++.||+|.+... ......+.+|+++++.+.|+| |+++++.|..++..++||
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN------VIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCc------hhhhhheeEeCCeEEEEE
Confidence 5799999999999999899999999988642 223456778999999998877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 78 EIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 78 E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||+ +++|.+++... ....+++..+..++.|++.+ +.|||+.|++|+|+++.|+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~dl~p~nil 138 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSA-----------------------LEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEE
Confidence 999 88999998753 22356777888888888877 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 139 i~------------------------------------------------------------------------------ 140 (267)
T cd08229 139 IT------------------------------------------------------------------------------ 140 (267)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++++|||++..... ......|++.|+|||.+.+..++.++|+||||+++|++++|.
T Consensus 141 -----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~ 203 (267)
T cd08229 141 -----------------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred -----------------CCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCC
Confidence 134689999998765322 122356888999999998888999999999999999999999
Q ss_pred ccccccC
Q psy2006 312 TLMARKT 318 (351)
Q Consensus 312 ~pf~~~~ 318 (351)
.||.+..
T Consensus 204 ~p~~~~~ 210 (267)
T cd08229 204 SPFYGDK 210 (267)
T ss_pred CCccccc
Confidence 9997654
No 251
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=6.6e-29 Score=226.15 Aligned_cols=198 Identities=16% Similarity=0.203 Sum_probs=156.3
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++||+|+||+||+|.+.. +++.||+|++.... .....+.+|+.+++.++|+| |+++++++....+.+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~------iv~~~~~~~~~~~~~ 85 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH------VVRLLGVVSQGQPTL 85 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------eeeEEEEEcCCCCeE
Confidence 579999999999998652 45789999986432 23456788999999998877 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCC--------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY--------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREV 145 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~--------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 145 (351)
+||||+ +++|.+++..... ..++...+..++.|++.+ |.|||+.+++|
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~~vH 142 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG-----------------------MAYLNANKFVH 142 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccc
Confidence 999999 8999999976431 123444555566666666 99999999999
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
+|+|+.|+.+.+
T Consensus 143 ~dlkp~Nil~~~-------------------------------------------------------------------- 154 (277)
T cd05062 143 RDLAARNCMVAE-------------------------------------------------------------------- 154 (277)
T ss_pred CCcchheEEEcC--------------------------------------------------------------------
Confidence 999999998862
Q ss_pred chhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeee
Q psy2006 226 SSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
...++|+|||++...... .....+++.|+|||.+.+..++.++|+|||
T Consensus 155 ---------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 207 (277)
T cd05062 155 ---------------------------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 207 (277)
T ss_pred ---------------------------CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHH
Confidence 346899999987542211 122345678999999988889999999999
Q ss_pred eeeeEeecc-ccccccccCCCcee
Q psy2006 301 GCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 301 G~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
||++|++++ |..||.+.+..+.+
T Consensus 208 G~~l~el~~~~~~p~~~~~~~~~~ 231 (277)
T cd05062 208 GVVLWEIATLAEQPYQGMSNEQVL 231 (277)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHH
Confidence 999999998 78999877655443
No 252
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.96 E-value=1.1e-28 Score=236.22 Aligned_cols=220 Identities=19% Similarity=0.226 Sum_probs=164.5
Q ss_pred ccccCcccceEEEEEEe-----ecCcEEEEEEecchh--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVY-----EVDSVVALKIIKNVE--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++||+|+||.||+|+++ ..++.||+|++.... ...+.+.+|+++|..+. |+| |+++++++..++++
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~n------iv~~~~~~~~~~~~ 116 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLN------IVNLLGACTKGGPI 116 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCC------eEEEEEEEccCCCc
Confidence 68999999999999964 345789999997532 22346778999999997 766 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCch-----------------------------------------H-----------H
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSL-----------------------------------------D-----------Q 100 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~-----------------------------------------~-----------~ 100 (351)
++||||+ +|+|.+++++........ . .
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 9999999 999999998753210000 0 0
Q ss_pred HHHHHHHHHHh---------------------hhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 101 VRHMSYQLIYA---------------------KENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 101 ~~~~~~ql~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
......++..+ ..+....+++..+..++.|++.||.|||+.+++|||+|+.|+.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~-- 274 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE-- 274 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC--
Confidence 00000000000 0012235677888899999999999999999999999999998862
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 275 -------------------------------------------------------------------------------- 274 (401)
T cd05107 275 -------------------------------------------------------------------------------- 274 (401)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITL 313 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~p 313 (351)
...++|+|||++..... ......+++.|+|||.+.+..++.++|+|||||+++++++ |..|
T Consensus 275 -------------~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 275 -------------GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred -------------CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence 34589999998864221 1123456788999999988888999999999999999998 8999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|......+.
T Consensus 342 ~~~~~~~~~ 350 (401)
T cd05107 342 YPELPMNEQ 350 (401)
T ss_pred CCCCCchHH
Confidence 977654443
No 253
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=4.4e-29 Score=224.73 Aligned_cols=192 Identities=21% Similarity=0.289 Sum_probs=165.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||.|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++|+| |+++++.|..+.+.|+|+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPF------LVNLWYSFQDEENMYLVV 79 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCC------hHHHHHhhcCCCeEEEEE
Confidence 57999999999999998899999999997532 33457788999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++... ..+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 80 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~-----------------------l~~lh~~~i~h~dl~~~nil~~ 134 (258)
T cd05578 80 DLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLA-----------------------LEYLHSKGIIHRDIKPDNILLD 134 (258)
T ss_pred eCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHHeEEc
Confidence 999 99999999776 357788888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (258)
T cd05578 135 -------------------------------------------------------------------------------- 134 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||.+..... ......|+..|+|||.+....++.++|+||+|+++|++++|..||
T Consensus 135 ---------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 199 (258)
T cd05578 135 ---------------EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY 199 (258)
T ss_pred ---------------CCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence 234689999998765322 223456788999999998888899999999999999999999999
Q ss_pred cccCC
Q psy2006 315 ARKTK 319 (351)
Q Consensus 315 ~~~~~ 319 (351)
...+.
T Consensus 200 ~~~~~ 204 (258)
T cd05578 200 RGHSR 204 (258)
T ss_pred CCCCc
Confidence 87764
No 254
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.96 E-value=1.5e-28 Score=224.42 Aligned_cols=191 Identities=21% Similarity=0.210 Sum_probs=155.4
Q ss_pred CccccCcccceEEEEE----EeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--e
Q psy2006 1 MCSLNCVASNHVCTNV----VYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--H 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~ 72 (351)
++.||.|+||+||++. ...+++.||+|++.... .....+.+|+++++.++|+| |+++++++.... .
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~ 82 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHEN------IVKYKGCCSEQGGKG 82 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCC------EeeEEEEEecCCCce
Confidence 4689999999998865 33478899999997542 23456788999999999887 999999887643 6
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+++||||+ +++|.+++... .+++..+..++.|++.+ |+|||+++++|+|+|+.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~-----------------------l~~lH~~~i~H~dlkp~ 136 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEG-----------------------MAYLHSQHYIHRDLAAR 136 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccccChh
Confidence 89999999 89999998764 37888888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 137 Nili~--------------------------------------------------------------------------- 141 (283)
T cd05080 137 NVLLD--------------------------------------------------------------------------- 141 (283)
T ss_pred eEEEc---------------------------------------------------------------------------
Confidence 99876
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
....++|+|||++....... ....++..|+|||.+....++.++|+|||||+++
T Consensus 142 --------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~ 201 (283)
T cd05080 142 --------------------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLY 201 (283)
T ss_pred --------------------CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHH
Confidence 23468999999876532211 1233456799999998888899999999999999
Q ss_pred eeccccccccccC
Q psy2006 306 ELYLGITLMARKT 318 (351)
Q Consensus 306 ~l~tG~~pf~~~~ 318 (351)
+++||..||....
T Consensus 202 el~tg~~p~~~~~ 214 (283)
T cd05080 202 ELLTHCDSKQSPP 214 (283)
T ss_pred HHHhCCCCCCCCc
Confidence 9999999986543
No 255
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=9.2e-29 Score=228.46 Aligned_cols=197 Identities=20% Similarity=0.278 Sum_probs=161.2
Q ss_pred ccccCcccceEEEEEEe-----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+.||+|+||.||+|.+. .++..||+|.++.. ....+.+.+|+++++++ +|+| |+++++.+...+..
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv~~~~~~~~~~~~ 114 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHEN------IVNLLGACTIGGPI 114 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCC------cceEEEEEecCCce
Confidence 57999999999999863 24568999998753 23345678899999999 6777 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++||||+ +++|.+++++.....+++.++..++.|++.+ +.|+|+++++|+|+++.|
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~-----------------------l~~lH~~~ivH~dlkp~N 171 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKG-----------------------MAFLASKNCIHRDLAARN 171 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeehhhhccce
Confidence 9999999 8999999987654447888888888888888 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 172 il~~~--------------------------------------------------------------------------- 176 (302)
T cd05055 172 VLLTH--------------------------------------------------------------------------- 176 (302)
T ss_pred EEEcC---------------------------------------------------------------------------
Confidence 98862
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
...++++|||++...... .....+++.|+|||.+.+..++.++|+||+||++|++
T Consensus 177 --------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el 236 (302)
T cd05055 177 --------------------GKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236 (302)
T ss_pred --------------------CCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHH
Confidence 245789999987643221 1123456789999999888899999999999999999
Q ss_pred cc-ccccccccCCCce
Q psy2006 308 YL-GITLMARKTKTKY 322 (351)
Q Consensus 308 ~t-G~~pf~~~~~~~~ 322 (351)
++ |..||.+.+..+.
T Consensus 237 ~t~g~~p~~~~~~~~~ 252 (302)
T cd05055 237 FSLGSNPYPGMPVDSK 252 (302)
T ss_pred HhCCCCCcCCCCchHH
Confidence 98 9999987665443
No 256
>KOG4645|consensus
Probab=99.96 E-value=8.9e-30 Score=257.53 Aligned_cols=196 Identities=23% Similarity=0.264 Sum_probs=164.4
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchhhh---hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY---REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+||.|.||.||.|++..+|+..|+|-++..... .+.+.+|..++..+.|+| +|+++++=...+.++|.|||
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpN------lV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPN------LVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCcc------ccccCceeecHHHHHHHHHH
Confidence 699999999999999999999999999764332 345688999999999988 99999988888899999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
| +|+|.+++...+ -.+|...+.+..|++.| +.|||++||+|||+|+.||.|.+
T Consensus 1316 C~~GsLa~ll~~gr--i~dE~vt~vyt~qll~g-----------------------la~LH~~gIVHRDIK~aNI~Ld~- 1369 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGR--IEDEMVTRVYTKQLLEG-----------------------LAYLHEHGIVHRDIKPANILLDF- 1369 (1509)
T ss_pred hccCcHHHHHHhcc--hhhhhHHHHHHHHHHHH-----------------------HHHHHhcCceecCCCccceeeec-
Confidence 9 999999988764 35666666666666666 99999999999999999998873
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 1370 -------------------------------------------------------------------------------- 1369 (1509)
T KOG4645|consen 1370 -------------------------------------------------------------------------------- 1369 (1509)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceec-------cccccccccceeeCceeeecC---CCCCccceeeeeeeeEeec
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDD-------EHHSTIVSTRHYRAPEVILEL---GWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-------~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~ 308 (351)
.+.+|++|||.+.... .......|||.|||||++.+. +...++|||||||++.||+
T Consensus 1370 --------------~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~ 1435 (1509)
T KOG4645|consen 1370 --------------NGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMA 1435 (1509)
T ss_pred --------------CCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEee
Confidence 3468999999886522 233467899999999999864 4678899999999999999
Q ss_pred cccccccccCC-Cceee
Q psy2006 309 LGITLMARKTK-TKYFY 324 (351)
Q Consensus 309 tG~~pf~~~~~-~~~~~ 324 (351)
||+.||+..+. ..+++
T Consensus 1436 tGkrPW~~~dne~aIMy 1452 (1509)
T KOG4645|consen 1436 TGKRPWAELDNEWAIMY 1452 (1509)
T ss_pred cCCCchhhccchhHHHh
Confidence 99999988664 44444
No 257
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=1.2e-28 Score=221.63 Aligned_cols=193 Identities=20% Similarity=0.236 Sum_probs=161.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||.|+||.||+|. .+++.||+|++... ...+.+.+|+.+++.++|++ |+++++++..+ ..++||||+
T Consensus 12 ~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 12 EIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-VTAQAFLEETAVMTKLHHKN------LVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred eeeccCCCCceEecc--cCCCceEEEeecCc-chHHHHHHHHHHHHhCCCCC------cCeEEEEEcCC-CcEEEEECCC
Confidence 579999999999997 68899999999753 23457788999999999877 99999998654 579999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......+++..+..++.|++.+ +.|+|+.|++|||+++.|+.+.+
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~~~H~dl~p~nili~~--- 135 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEG-----------------------MEYLESKKLVHRDLAARNILVSE--- 135 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccccCcceEEEcC---
Confidence 8899999987755567888888888888888 99999999999999999998862
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (254)
T cd05083 136 -------------------------------------------------------------------------------- 135 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCC
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTK 319 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~ 319 (351)
...++|+|||.+............+..|+|||.+.+..++.++|+|||||++|++++ |..||...+.
T Consensus 136 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 203 (254)
T cd05083 136 ------------DGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL 203 (254)
T ss_pred ------------CCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH
Confidence 346899999988654333333344568999999988888999999999999999997 9999987765
Q ss_pred Cce
Q psy2006 320 TKY 322 (351)
Q Consensus 320 ~~~ 322 (351)
.+.
T Consensus 204 ~~~ 206 (254)
T cd05083 204 KEV 206 (254)
T ss_pred HHH
Confidence 443
No 258
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=8.9e-29 Score=224.86 Aligned_cols=200 Identities=15% Similarity=0.212 Sum_probs=161.9
Q ss_pred CccccCcccceEEEEEEee-----cCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+++||.|+||+||+|+.+. ..+.||+|.+..... ..+.+.+|++++++++|+| |+++++++......
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~ 83 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKN------VVRLLGLCREAEPH 83 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcc------eeeeEEEECCCCcc
Confidence 3679999999999999753 457899999975332 3467889999999999877 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCC-------CCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccc
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYL-------PYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREV 145 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~-------~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 145 (351)
|+||||+ +++|.+++...... .+++..+..++.|++.+ |.|||+.+++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~-----------------------l~~LH~~~i~H 140 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG-----------------------MDHLSNARFVH 140 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHH-----------------------HHHhhhcCccc
Confidence 9999999 89999999876421 46777777777777777 99999999999
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
+|+|+.|+.+.+
T Consensus 141 ~dlkp~Nili~~-------------------------------------------------------------------- 152 (275)
T cd05046 141 RDLAARNCLVSS-------------------------------------------------------------------- 152 (275)
T ss_pred CcCccceEEEeC--------------------------------------------------------------------
Confidence 999999998862
Q ss_pred chhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecCCCCCccceeeee
Q psy2006 226 SSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIG 301 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 301 (351)
...++++|||.+..... ......+++.|++||.+.+...+.++|+||+|
T Consensus 153 ---------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG 205 (275)
T cd05046 153 ---------------------------QREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFG 205 (275)
T ss_pred ---------------------------CCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHH
Confidence 34578888887653211 12234556789999999888889999999999
Q ss_pred eeeEeecc-ccccccccCCCceee
Q psy2006 302 CIIFELYL-GITLMARKTKTKYFY 324 (351)
Q Consensus 302 ~~l~~l~t-G~~pf~~~~~~~~~~ 324 (351)
++++++++ |..||...+..+++.
T Consensus 206 ~~l~~l~~~~~~p~~~~~~~~~~~ 229 (275)
T cd05046 206 VLMWEVFTQGELPFYGLSDEEVLN 229 (275)
T ss_pred HHHHHHHhCCCCCccccchHHHHH
Confidence 99999998 889998766655543
No 259
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.95 E-value=1.5e-28 Score=222.67 Aligned_cols=198 Identities=14% Similarity=0.130 Sum_probs=158.0
Q ss_pred ccccCcccceEEEEEEeec---CcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC----
Q psy2006 2 CSLNCVASNHVCTNVVYEV---DSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG---- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~---- 71 (351)
+.||+|+||.||+|.+..+ ++.||+|.+... ....+.+.+|+.+++.+.|+| |+++++.+....
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPN------VMKLIGVCFEASSLQK 78 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCC------eeeEEeeeccCCcccc
Confidence 6799999999999997653 488999999753 233456788999999999888 999999886655
Q ss_pred --eEEEEEecc-CCCHHHHHHhcC----CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccc
Q psy2006 72 --HMCIAFEIL-GLSVFDFLKENN----YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKRE 144 (351)
Q Consensus 72 --~~~lV~E~~-g~sL~~~l~~~~----~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 144 (351)
..++||||+ +++|.+++.... ...+++..+..++.|++.| |.|||+++++
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a-----------------------L~~lH~~~i~ 135 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG-----------------------MEYLSNRNFI 135 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH-----------------------HHHHHhCCee
Confidence 389999999 899999986542 1246677777777777777 9999999999
Q ss_pred ccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 145 VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 145 h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
|||+|+.|+.+.+
T Consensus 136 H~dlkp~Nil~~~------------------------------------------------------------------- 148 (273)
T cd05035 136 HRDLAARNCMLRE------------------------------------------------------------------- 148 (273)
T ss_pred ccccchheEEECC-------------------------------------------------------------------
Confidence 9999999998862
Q ss_pred CchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceee
Q psy2006 225 PSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
...+||+|||.+...... .....++..|+|||.+.+..++.++|+||
T Consensus 149 ----------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~S 200 (273)
T cd05035 149 ----------------------------DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWA 200 (273)
T ss_pred ----------------------------CCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHH
Confidence 346899999988653211 11223456899999998888899999999
Q ss_pred eeeeeEeecc-ccccccccCCCcee
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
|||++|++++ |..||.+.+..+.+
T Consensus 201 lG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 201 FGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999998 99999877665544
No 260
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=4.8e-29 Score=230.86 Aligned_cols=197 Identities=21% Similarity=0.304 Sum_probs=160.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh---hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~lV 76 (351)
+.||.|+||.||+|.+..+++.||+|++..... ......+|+.+++.++|++ |+++++++... +.+++|
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN------IVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCC------CcceEEEEecCCCCeEEEE
Confidence 579999999999999999999999999974321 1234567999999999888 99999999765 479999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
|||++++|.+++.... ..+++..+..++.|++.+ |.|||+.|++|+|++++|+.+.
T Consensus 87 ~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dl~p~nil~~ 142 (309)
T cd07845 87 MEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRG-----------------------LQYLHENFIIHRDLKVSNLLLT 142 (309)
T ss_pred EecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEEEC
Confidence 9999889999987653 357777777777777777 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 143 ~------------------------------------------------------------------------------- 143 (309)
T cd07845 143 D------------------------------------------------------------------------------- 143 (309)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
...++|+|||.+..... ......+++.|+|||.+.+ ..++.++|+||+||++|++++|.+
T Consensus 144 ----------------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~ 207 (309)
T cd07845 144 ----------------KGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP 207 (309)
T ss_pred ----------------CCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCC
Confidence 34689999998865432 2223345778999999876 457899999999999999999999
Q ss_pred cccccCCCcee
Q psy2006 313 LMARKTKTKYF 323 (351)
Q Consensus 313 pf~~~~~~~~~ 323 (351)
||...+..+.+
T Consensus 208 ~f~~~~~~~~~ 218 (309)
T cd07845 208 LLPGKSEIEQL 218 (309)
T ss_pred CCCCCCHHHHH
Confidence 99877655443
No 261
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=9.1e-29 Score=221.97 Aligned_cols=199 Identities=19% Similarity=0.253 Sum_probs=165.8
Q ss_pred CccccCcccceEEEEEEeecC----cEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVD----SVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
.+.||.|+||.||+|.+...+ ..||+|++..... ..+.+..|+.+++.+.|++ |+++++.+...+..+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~ 77 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPN------IVKLLGVCTEEEPLM 77 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCc------hheEEEEEcCCCeeE
Confidence 367999999999999987766 9999999976432 4567889999999998777 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
++|||+ +++|.+++.......+++..+..++.|++.+ +.+||+.+++|+|++++|+
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~-----------------------l~~lh~~~~~h~dl~~~ni 134 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARG-----------------------MEYLESKNFIHRDLAARNC 134 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHH-----------------------HHHHhcCCeeecccccceE
Confidence 999999 8899999987653337888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 135 l~~~---------------------------------------------------------------------------- 138 (258)
T smart00219 135 LVGE---------------------------------------------------------------------------- 138 (258)
T ss_pred EEcc----------------------------------------------------------------------------
Confidence 8862
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccccc----cccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
...++|+|||.+........ ...+++.|++||.+.+..++.++|+||+||+++++++
T Consensus 139 -------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~ 199 (258)
T smart00219 139 -------------------NLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFT 199 (258)
T ss_pred -------------------CCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHh
Confidence 34689999998865332211 2236678999999987888999999999999999998
Q ss_pred -ccccccccCCCcee
Q psy2006 310 -GITLMARKTKTKYF 323 (351)
Q Consensus 310 -G~~pf~~~~~~~~~ 323 (351)
|.+||...+..+.+
T Consensus 200 ~g~~p~~~~~~~~~~ 214 (258)
T smart00219 200 LGESPYPGMSNEEVL 214 (258)
T ss_pred CCCCCCCCCCHHHHH
Confidence 89999876665544
No 262
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=1.6e-28 Score=224.00 Aligned_cols=192 Identities=20% Similarity=0.279 Sum_probs=154.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHH-HHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINA-LQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~-l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|+||.||+|++..+++.||+|.+.... ........|+.+ ++.+.|+| |+++++++..++..|+|||
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPY------TVTFYGALFREGDVWICME 80 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCC------eeeeeEEEecCCcEEEEhh
Confidence 57999999999999999999999999997532 223345556665 55566666 9999999999999999999
Q ss_pred ccCCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCeEE
Q psy2006 79 ILGLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDIRL 155 (351)
Q Consensus 79 ~~g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni~l 155 (351)
|+.++|.+++... ....+++..+..++.|++.| ++|||++ +++|+|++++|+.+
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~~i~h~dlkp~nil~ 137 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKA-----------------------LEYLHSKLSVIHRDVKPSNVLI 137 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHH-----------------------HHHHhhcCCeecCCCCHHHEEE
Confidence 9998998888653 22357788888888888887 9999997 99999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 138 ~------------------------------------------------------------------------------- 138 (283)
T cd06617 138 N------------------------------------------------------------------------------- 138 (283)
T ss_pred C-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc--cccccccceeeCceeeec----CCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH--HSTIVSTRHYRAPEVILE----LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~~l~~l~t 309 (351)
....+||+|||++...... .....++..|+|||.+.+ ..++.++|+||+||++|++++
T Consensus 139 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~ 202 (283)
T cd06617 139 ----------------RNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT 202 (283)
T ss_pred ----------------CCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh
Confidence 2346899999988653221 223567889999998864 456889999999999999999
Q ss_pred cccccccc
Q psy2006 310 GITLMARK 317 (351)
Q Consensus 310 G~~pf~~~ 317 (351)
|..||...
T Consensus 203 g~~p~~~~ 210 (283)
T cd06617 203 GRFPYDSW 210 (283)
T ss_pred CCCCCCcc
Confidence 99999653
No 263
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=5.5e-29 Score=233.09 Aligned_cols=194 Identities=20% Similarity=0.288 Sum_probs=155.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhh---------------HHHHHHHHHHHHhCCCCCCCCcceeeeeee
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYR---------------EAARLEINALQKIGEKDPNGRHLCVKMLDW 66 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~---------------~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~ 66 (351)
+.||.|+||+||+|.+..+++.||+|++....... ..+.+|+.+++.+.|+| |++++++
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~ 88 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHEN------IMGLVDV 88 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcc------eeeeeEE
Confidence 45999999999999999999999999996532111 24678999999999887 9999999
Q ss_pred EeeCCeEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccc
Q psy2006 67 FDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVR 146 (351)
Q Consensus 67 f~~~~~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~ 146 (351)
|...++.|+||||+.++|.+++.... .+++..+..++.|++.+ |+|||+.|++|+
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~a-----------------------L~~LH~~~i~H~ 143 (335)
T PTZ00024 89 YVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNG-----------------------LNVLHKWYFMHR 143 (335)
T ss_pred EecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecc
Confidence 99999999999999889999987654 57788888888888887 999999999999
Q ss_pred ccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 147 RVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 147 d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
|+++.|+.+.+
T Consensus 144 dl~~~nill~~--------------------------------------------------------------------- 154 (335)
T PTZ00024 144 DLSPANIFINS--------------------------------------------------------------------- 154 (335)
T ss_pred cccHHHeEECC---------------------------------------------------------------------
Confidence 99999876652
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceec-----------------cccccccccceeeCceeeecC
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-----------------EHHSTIVSTRHYRAPEVILEL 289 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~ 289 (351)
...++|+|||++.... .......+++.|+|||.+.+.
T Consensus 155 --------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 208 (335)
T PTZ00024 155 --------------------------KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA 208 (335)
T ss_pred --------------------------CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC
Confidence 2245666666553321 111223457889999998764
Q ss_pred -CCCCccceeeeeeeeEeeccccccccccCCCc
Q psy2006 290 -GWAQPCDVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 290 -~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
.++.++|+||+||+++++++|.+||.+.+..+
T Consensus 209 ~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 209 EKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 46889999999999999999999998776544
No 264
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=7.6e-29 Score=224.71 Aligned_cols=197 Identities=11% Similarity=0.111 Sum_probs=152.7
Q ss_pred ccccCcccceEEEEEEee--cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE--VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|.... ....+|+|.+.... .....+.+|+.+++.++|+| |+++++.+...+..|+||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~n------ii~~~~~~~~~~~~~lv~ 74 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPN------VLQCLGQCIESIPYLLVL 74 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCC------cceEEEEECCCCceEEEE
Confidence 479999999999997533 34578888876432 22345678999999998887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCC---CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 78 EIL-GLSVFDFLKENNY---LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~---~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
||+ +++|.+++..... ...++..+..++.|++.| ++|||+++++|||+|+.|+
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~ivH~dlkp~Ni 131 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASG-----------------------LLWLHQADFIHSDLALRNC 131 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHH-----------------------HHHHHhcCEecccccHhhe
Confidence 999 8999999987542 123455666666666666 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 132 ll~----------------------------------------------------------------------------- 134 (269)
T cd05042 132 QLT----------------------------------------------------------------------------- 134 (269)
T ss_pred Eec-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeec-------CCCCCccceeeee
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILE-------LGWAQPCDVWSIG 301 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG 301 (351)
....+||+|||++..... ......+++.|+|||++.. ..++.++|+||+|
T Consensus 135 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 135 ------------------ADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred ------------------CCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 234689999998754211 1123345677999998743 3568899999999
Q ss_pred eeeEeecc-ccccccccCCCce
Q psy2006 302 CIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 302 ~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
|++|++++ |..||...+..+.
T Consensus 197 ~~l~el~~~~~~p~~~~~~~~~ 218 (269)
T cd05042 197 VTMWELFTAADQPYPDLSDEQV 218 (269)
T ss_pred HHHHHHHhCCCCCCCcCCHHHH
Confidence 99999998 8889987765543
No 265
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=1.8e-28 Score=221.39 Aligned_cols=198 Identities=20% Similarity=0.294 Sum_probs=165.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||+||+|.+..++..+|+|++.... ...+.+.+|+.+++.++|++ |+++++.+...+..++|||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN------VVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCC------EEEEEEEEeeCCEEEEEEec
Confidence 67999999999999988899999999996532 34467789999999998877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCC-CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 80 L-GLSVFDFLKENNY-LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~-~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
+ +++|.+++..... ..+++..+..++.|++.+ +.+||+.|++|+|+++.|+.+.+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~a-----------------------l~~lh~~~i~h~~l~p~ni~~~~ 137 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKG-----------------------LEYLHSNGQIHRDIKAGNILLGE 137 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHhEEEcC
Confidence 9 8999999987532 357788888888888887 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (267)
T cd06610 138 -------------------------------------------------------------------------------- 137 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeecc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~t 309 (351)
...++|+|||++..... ......|+..|++||.+... .++.++|+||+||+++++++
T Consensus 138 ---------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~ 202 (267)
T cd06610 138 ---------------DGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT 202 (267)
T ss_pred ---------------CCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh
Confidence 34689999998754221 11334678899999998776 77999999999999999999
Q ss_pred ccccccccCCCcee
Q psy2006 310 GITLMARKTKTKYF 323 (351)
Q Consensus 310 G~~pf~~~~~~~~~ 323 (351)
|..||...+..+.+
T Consensus 203 g~~p~~~~~~~~~~ 216 (267)
T cd06610 203 GAAPYSKYPPMKVL 216 (267)
T ss_pred CCCCccccChhhhH
Confidence 99999887665544
No 266
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95 E-value=1.2e-28 Score=227.07 Aligned_cols=198 Identities=17% Similarity=0.217 Sum_probs=154.9
Q ss_pred ccccCcccceEEEEEEeecCc--EEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS--VVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|.+..++. .+|+|.++.. ....+.+.+|+.++.++ .|+| |+++++++...+..|+|
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~------iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPN------IINLLGACENRGYLYIA 81 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCc------hhheEEEEccCCcceEE
Confidence 579999999999999876654 5788888742 23345678899999999 5666 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 77 FEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
|||+ +++|.+++..... ..+++..+..++.|++.| |+|||++
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a-----------------------l~~lH~~ 138 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATG-----------------------MQYLSEK 138 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHH-----------------------HHHHHHC
Confidence 9999 8899999976532 124455555555555555 9999999
Q ss_pred cccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
|++|||+|+.|+.+.+
T Consensus 139 ~ivH~dlkp~Nill~~---------------------------------------------------------------- 154 (297)
T cd05089 139 QFIHRDLAARNVLVGE---------------------------------------------------------------- 154 (297)
T ss_pred CcccCcCCcceEEECC----------------------------------------------------------------
Confidence 9999999999998862
Q ss_pred CCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecccc--ccccccceeeCceeeecCCCCCccceee
Q psy2006 222 DKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
...+||+|||++....... .....+..|+|||.+.+..++.++|+||
T Consensus 155 -------------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 203 (297)
T cd05089 155 -------------------------------NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWS 203 (297)
T ss_pred -------------------------------CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHH
Confidence 2458999999875422211 1122345699999998888999999999
Q ss_pred eeeeeEeecc-ccccccccCCCcee
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
|||++|+|++ |..||.+.+..+.+
T Consensus 204 lG~il~el~t~g~~pf~~~~~~~~~ 228 (297)
T cd05089 204 FGVLLWEIVSLGGTPYCGMTCAELY 228 (297)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999997 99999877655543
No 267
>KOG0664|consensus
Probab=99.95 E-value=6.5e-31 Score=227.22 Aligned_cols=195 Identities=22% Similarity=0.329 Sum_probs=160.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~ 73 (351)
|.||.|+||.||-+.|..+|+.||+|.+.... ...+++.+|+++|..++|.| |..++|+..-.. .+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdN------VLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDN------VLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcccc------HHHHHHhcCCCCchHHHHH
Confidence 67999999999999999999999999996532 34577889999999999888 999999887554 78
Q ss_pred EEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 74 CIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|.|.|.+..+|.+.+-.-. .++-+-+|.+..||+.| |.|||+.+|.|||+||+|+
T Consensus 133 YV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRG-----------------------LKYLHsA~ILHRDIKPGNL 187 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRG-----------------------LKYLHTANILHRDIKPGNL 187 (449)
T ss_pred HHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhh-----------------------hHHHhhcchhhccCCCccE
Confidence 8999999999998876644 45555555555555555 9999999999999999998
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 188 LVN----------------------------------------------------------------------------- 190 (449)
T KOG0664|consen 188 LVN----------------------------------------------------------------------------- 190 (449)
T ss_pred Eec-----------------------------------------------------------------------------
Confidence 765
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecC-CCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~ 308 (351)
+++.+||+|||+++..... ++.-+-|..|+|||+++|. .|+.+.||||+||++.|++
T Consensus 191 ------------------SNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELL 252 (449)
T KOG0664|consen 191 ------------------SNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELL 252 (449)
T ss_pred ------------------cCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHH
Confidence 4688999999999874332 2233457899999999985 5799999999999999999
Q ss_pred cccccccccCCCce
Q psy2006 309 LGITLMARKTKTKY 322 (351)
Q Consensus 309 tG~~pf~~~~~~~~ 322 (351)
-.+.+|...+.-+.
T Consensus 253 gRrILFQAq~PiqQ 266 (449)
T KOG0664|consen 253 QRKILFQAAGPIEQ 266 (449)
T ss_pred hhhhhhhccChHHH
Confidence 99999988776554
No 268
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=9.8e-29 Score=225.13 Aligned_cols=195 Identities=22% Similarity=0.376 Sum_probs=159.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeC--CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYH--GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~--~~~~l 75 (351)
+++||+|+||.||+|.+..+++.||+|+++... .......+|+.+++++. |+| |+++++++..+ +.+++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~------i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPN------ILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCC------ccceEEEEecCCCCcEEE
Confidence 367999999999999999999999999997532 12223457899998885 666 99999999988 89999
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||||++++|.+.+.... ..+++..+..++.|++.| |.|||+.+++|+|+++.|+.+
T Consensus 78 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~i~H~dl~p~ni~l 133 (282)
T cd07831 78 VFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKS-----------------------LDHMHRNGIFHRDIKPENILI 133 (282)
T ss_pred EEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceecccCHHHEEE
Confidence 99999889999987654 357788888888888877 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 134 ~~------------------------------------------------------------------------------ 135 (282)
T cd07831 134 KD------------------------------------------------------------------------------ 135 (282)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..++|+|||.+..... ......+++.|+|||.+.+ ..++.++|+||+||+++++++|.+
T Consensus 136 ------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~ 197 (282)
T cd07831 136 ------------------DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP 197 (282)
T ss_pred ------------------CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCc
Confidence 4689999998865322 2234567889999998755 445889999999999999999999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||.+.+..+
T Consensus 198 p~~~~~~~~ 206 (282)
T cd07831 198 LFPGTNELD 206 (282)
T ss_pred CCCCCCHHH
Confidence 998766543
No 269
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=1.7e-28 Score=222.00 Aligned_cols=197 Identities=18% Similarity=0.205 Sum_probs=161.6
Q ss_pred ccccCcccceEEEEEEeec---CcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV---DSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.|+||+||+|.+... ...||+|++.... .....+.+|+.+++.++|+| |+++++.+...+..|+|
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN------IIRLEGVVTKSRPVMII 83 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCC------cceEeEEEecCCceEEE
Confidence 5799999999999998644 4689999987532 23456788999999999877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~-----------------------l~~Lh~~~i~H~di~p~nili 139 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASG-----------------------MKYLSEMNYVHRDLAARNILV 139 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCcceEEE
Confidence 9999 889999997754 257788888888888887 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 140 ~~------------------------------------------------------------------------------ 141 (266)
T cd05033 140 NS------------------------------------------------------------------------------ 141 (266)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL- 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t- 309 (351)
...++|+|||++....... ....+++.|+|||.+.+..++.++|+|||||+++++++
T Consensus 142 -----------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~ 204 (266)
T cd05033 142 -----------------NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSY 204 (266)
T ss_pred -----------------CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHcc
Confidence 3468999999886542111 12234568999999988889999999999999999987
Q ss_pred ccccccccCCCcee
Q psy2006 310 GITLMARKTKTKYF 323 (351)
Q Consensus 310 G~~pf~~~~~~~~~ 323 (351)
|..||...+..+..
T Consensus 205 g~~p~~~~~~~~~~ 218 (266)
T cd05033 205 GERPYWDMSNQDVI 218 (266)
T ss_pred CCCCCCCCCHHHHH
Confidence 99999776655443
No 270
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=2.2e-28 Score=224.37 Aligned_cols=195 Identities=23% Similarity=0.297 Sum_probs=158.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeC-----CeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYH-----GHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~-----~~~~l 75 (351)
+.||.|+||.||+|.+..+++.+|+|++.........+.+|+.+++++ .|+| |++++++|... ++.|+
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~n------i~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPN------VVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCC------eEEEEEEEEeccccCCCeeEE
Confidence 579999999999999999999999999976444456677899999998 5666 99999998754 36999
Q ss_pred EEecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 76 AFEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
||||+ +++|.++++.. ....+++..++.++.|++.+ |+|||+.+++|+|++++|
T Consensus 102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~a-----------------------l~~lH~~~ivH~dlkp~n 158 (291)
T cd06639 102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG-----------------------LQHLHNNRIIHRDVKGNN 158 (291)
T ss_pred EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHH
Confidence 99999 88999988753 22356777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 159 ili~~--------------------------------------------------------------------------- 163 (291)
T cd06639 159 ILLTT--------------------------------------------------------------------------- 163 (291)
T ss_pred EEEcC---------------------------------------------------------------------------
Confidence 98762
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-----CCCCccceeeeeeee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-----GWAQPCDVWSIGCII 304 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~~l 304 (351)
...++|+|||.+..... ......|+..|+|||.+... .++.++|+||+||++
T Consensus 164 --------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~ 223 (291)
T cd06639 164 --------------------EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITA 223 (291)
T ss_pred --------------------CCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHH
Confidence 34589999998765321 22345678899999987543 257899999999999
Q ss_pred EeeccccccccccCCC
Q psy2006 305 FELYLGITLMARKTKT 320 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~ 320 (351)
|++++|.+||...+..
T Consensus 224 ~el~~g~~p~~~~~~~ 239 (291)
T cd06639 224 IELGDGDPPLFDMHPV 239 (291)
T ss_pred HHHhhCCCCCCCCcHH
Confidence 9999999999876543
No 271
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=1.8e-28 Score=223.33 Aligned_cols=194 Identities=25% Similarity=0.350 Sum_probs=162.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+++||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|++ |+++++.|..+++.|+|||
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY------VTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCC------EeEEEEEEEeCCeEEEEEE
Confidence 467999999999999998899999999986432 33456778999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++... .+++..+..++.|++.+ +.+||++|++|+|+++.|+.+.
T Consensus 83 ~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~dl~p~Ni~i~- 135 (277)
T cd06641 83 YLGGGSALDLLEPG---PLDETQIATILREILKG-----------------------LDYLHSEKKIHRDIKAANVLLS- 135 (277)
T ss_pred eCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHccCCeecCCCCHHhEEEC-
Confidence 99 88999988653 46777777777777777 9999999999999999998876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (277)
T cd06641 136 -------------------------------------------------------------------------------- 135 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
..+.++++|||++..... ......++..|+|||.+.+..++.++|+||+||+++++++|..||
T Consensus 136 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~ 201 (277)
T cd06641 136 --------------EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPH 201 (277)
T ss_pred --------------CCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 134588999998754221 123356788999999998888899999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+...
T Consensus 202 ~~~~~~~ 208 (277)
T cd06641 202 SELHPMK 208 (277)
T ss_pred CccchHH
Confidence 8665443
No 272
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95 E-value=3.6e-28 Score=224.88 Aligned_cols=193 Identities=21% Similarity=0.254 Sum_probs=161.4
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+++||.|+||+||+|.+..+++.||+|++... ....+.+.+|+.+++.++|+| |+++.+.+...+..++|
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~~~~~~~~~~~~~lv 93 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN------TIEYKGCYLREHTAWLV 93 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCC------EEEEEEEEEeCCeEEEE
Confidence 35799999999999999889999999998632 223356788999999999888 99999999999999999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
|||+.+++.+++.... ..+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 94 ~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~-----------------------L~~LH~~~i~H~dl~p~nIl~~ 149 (307)
T cd06607 94 MEYCLGSASDILEVHK-KPLQEVEIAAICHGALQG-----------------------LAYLHSHERIHRDIKAGNILLT 149 (307)
T ss_pred HHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceecCCCcccEEEC
Confidence 9999889988876543 257777788888888777 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 150 ~------------------------------------------------------------------------------- 150 (307)
T cd06607 150 E------------------------------------------------------------------------------- 150 (307)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeee---cCCCCCccceeeeeeeeEeecccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++|+|||++..... .....+++.|+|||.+. ...++.++|+||+|+++|++++|..|
T Consensus 151 ----------------~~~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p 213 (307)
T cd06607 151 ----------------PGTVKLADFGSASLVSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213 (307)
T ss_pred ----------------CCCEEEeecCcceecCC-CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCC
Confidence 34689999998865432 23456788999999885 34578899999999999999999999
Q ss_pred ccccCC
Q psy2006 314 MARKTK 319 (351)
Q Consensus 314 f~~~~~ 319 (351)
|...+.
T Consensus 214 ~~~~~~ 219 (307)
T cd06607 214 LFNMNA 219 (307)
T ss_pred CCCccH
Confidence 976554
No 273
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95 E-value=1.1e-28 Score=222.59 Aligned_cols=196 Identities=22% Similarity=0.256 Sum_probs=159.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
++||.|+||.||+|.+.. +..+|+|.+.......+.+.+|+++++.+.|++ |+++++++. .+..++||||+
T Consensus 12 ~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDK------LVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred eeecCcCCCeEEEEEEcC-CceEEEEEcccCCccHHHHHHHHHHHHhCCCCC------eeeEEEEEc-CCCcEEEEEcCC
Confidence 579999999999998744 456999998765444567788999999999877 999998875 45789999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......+++..+..++.|++.| |.|||+.|++|+|+++.|+.+.|
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------l~~lH~~~i~H~dl~~~Nill~~--- 137 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADG-----------------------MAYIERMNYIHRDLRAANILVGD--- 137 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEeecccCcceEEEcC---
Confidence 7899999987654457788888888888888 99999999999999999998862
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 138 -------------------------------------------------------------------------------- 137 (260)
T cd05069 138 -------------------------------------------------------------------------------- 137 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
...++|+|||.+....... ....++..|+|||.+.+..++.++|+||||+++|++++ |..||.
T Consensus 138 ------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 205 (260)
T cd05069 138 ------------NLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred ------------CCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3468999999886532211 12345667999999988888999999999999999999 999998
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+.+..+..
T Consensus 206 ~~~~~~~~ 213 (260)
T cd05069 206 GMVNREVL 213 (260)
T ss_pred CCCHHHHH
Confidence 87655543
No 274
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=6.9e-29 Score=233.42 Aligned_cols=191 Identities=25% Similarity=0.478 Sum_probs=161.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
+.||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.+|+.+.|+| |+++++.|..+. +
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHEN------VIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCC------ccceeeeecCCccccccce
Confidence 5799999999999999999999999998642 223456778999999999888 999999998664 4
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+||||++++|.+++... .+++..++.++.|++.| +.|||+.|++|||+++.|
T Consensus 95 ~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~a-----------------------l~~LH~~gi~H~dlkp~N 148 (343)
T cd07880 95 FYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKG-----------------------LKYIHAAGIIHRDLKPGN 148 (343)
T ss_pred EEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHH
Confidence 6999999999999888653 57888888888888888 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 149 ill~---------------------------------------------------------------------------- 152 (343)
T cd07880 149 LAVN---------------------------------------------------------------------------- 152 (343)
T ss_pred EEEc----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++++|||++...........+++.|++||.+.+ ..++.++|+||+||+++++++|.
T Consensus 153 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~ 213 (343)
T cd07880 153 -------------------EDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213 (343)
T ss_pred -------------------CCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 2346899999998765544445677889999999876 35788999999999999999999
Q ss_pred ccccccCC
Q psy2006 312 TLMARKTK 319 (351)
Q Consensus 312 ~pf~~~~~ 319 (351)
.||.+.+.
T Consensus 214 ~pf~~~~~ 221 (343)
T cd07880 214 PLFKGHDH 221 (343)
T ss_pred CCCCCCCH
Confidence 99987654
No 275
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.95 E-value=2.1e-28 Score=220.87 Aligned_cols=195 Identities=21% Similarity=0.236 Sum_probs=160.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
++||+|+||.||+|.+ ..+..+|+|.+.......+.+.+|+++++.+.|++ |+++.+.+.. ...++||||+
T Consensus 12 ~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 12 KKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK------LVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred eEecCccceEEEEEEe-cCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCC------cceEEEEEcC-CCeEEEEEeCC
Confidence 6799999999999985 45667999999765444567788999999999877 9999999887 7889999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.......++...+..++.|++.+ |.|+|+.|++|+|+++.|+.+.
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------L~~lH~~~i~H~dl~p~ni~i~---- 136 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG-----------------------MAFIEQRNYIHRDLRAANILVS---- 136 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHH-----------------------HHHHHhCCccccccCcceEEEc----
Confidence 8899999987655567777888888888888 9999999999999999999886
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (260)
T cd05073 137 -------------------------------------------------------------------------------- 136 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
....++|+|||.+....... ....++..|+|||.+.+..++.++|+|||||++++++| |..||.
T Consensus 137 -----------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 205 (260)
T cd05073 137 -----------ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 205 (260)
T ss_pred -----------CCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCC
Confidence 23468999999876432111 12234567999999988888999999999999999998 999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
+.+..+.
T Consensus 206 ~~~~~~~ 212 (260)
T cd05073 206 GMSNPEV 212 (260)
T ss_pred CCCHHHH
Confidence 7665443
No 276
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=1.4e-28 Score=224.54 Aligned_cols=198 Identities=18% Similarity=0.199 Sum_probs=156.7
Q ss_pred CccccCcccceEEEEEEe-----ecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
.++||+|+||.||+|... .++..+|+|.+... ....+.+.+|+++++.++|+| |+++++++...+..|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~ 83 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH------IVRFYGVCTEGRPLL 83 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCC------CceEEEEEecCCceE
Confidence 368999999999999743 35678999998753 344567889999999999887 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCC-------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY-------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~-------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~ 140 (351)
+||||+ +++|.+++..... ..+++..+..++.|++.| +.|||+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a-----------------------l~~LH~ 140 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASG-----------------------MVYLAS 140 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHH-----------------------HHHHHH
Confidence 999999 8999999987542 124444555555555555 999999
Q ss_pred ccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCC
Q psy2006 141 KKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220 (351)
Q Consensus 141 ~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~ 220 (351)
.|++|+|+|+.|+.+.+
T Consensus 141 ~~i~H~dlkp~nil~~~--------------------------------------------------------------- 157 (280)
T cd05092 141 LHFVHRDLATRNCLVGQ--------------------------------------------------------------- 157 (280)
T ss_pred CCeecccccHhhEEEcC---------------------------------------------------------------
Confidence 99999999999998862
Q ss_pred CCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCcc
Q psy2006 221 FDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPC 295 (351)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~ 295 (351)
...++|+|||++..... ......+++.|+|||.+.+..++.++
T Consensus 158 --------------------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 205 (280)
T cd05092 158 --------------------------------GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 205 (280)
T ss_pred --------------------------------CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchh
Confidence 34689999998754211 11223346789999999888899999
Q ss_pred ceeeeeeeeEeecc-ccccccccCCCce
Q psy2006 296 DVWSIGCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 296 DiwslG~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
|+|||||++|++++ |.+||...+..+.
T Consensus 206 Di~slG~il~el~~~g~~p~~~~~~~~~ 233 (280)
T cd05092 206 DIWSFGVVLWEIFTYGKQPWYQLSNTEA 233 (280)
T ss_pred hHHHHHHHHHHHHcCCCCCCccCCHHHH
Confidence 99999999999998 9999977655443
No 277
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=2.2e-28 Score=224.65 Aligned_cols=198 Identities=16% Similarity=0.201 Sum_probs=159.7
Q ss_pred CccccCcccceEEEEEEeecC----------------cEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceee
Q psy2006 1 MCSLNCVASNHVCTNVVYEVD----------------SVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVK 62 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~----------------~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~ 62 (351)
+++||+|+||.||+|.+...+ ..||+|.+.... ...+.+.+|+++++.++|+| |++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~ 83 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPN------IAR 83 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCC------EeE
Confidence 368999999999999876533 568999997542 34567788999999999877 999
Q ss_pred eeeeEeeCCeEEEEEecc-CCCHHHHHHhcCC---------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHH
Q psy2006 63 MLDWFDYHGHMCIAFEIL-GLSVFDFLKENNY---------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132 (351)
Q Consensus 63 l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~---------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~ 132 (351)
+++++..+++.++|||++ +++|.+++..... ..+++..+..++.|++.|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a--------------------- 142 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG--------------------- 142 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH---------------------
Confidence 999999999999999999 8999999977541 145666666667766666
Q ss_pred hhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCCh
Q psy2006 133 YAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISL 212 (351)
Q Consensus 133 ~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~ 212 (351)
|.|||+.+++|+|+|+.|+.+.+
T Consensus 143 --l~~LH~~~i~H~dlkp~Nili~~------------------------------------------------------- 165 (296)
T cd05051 143 --MRYLESLNFVHRDLATRNCLVGK------------------------------------------------------- 165 (296)
T ss_pred --HHHHHHcCccccccchhceeecC-------------------------------------------------------
Confidence 99999999999999999998872
Q ss_pred hhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeee
Q psy2006 213 SEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVIL 287 (351)
Q Consensus 213 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~ 287 (351)
...++|+|||.+..... ......+++.|+|||.+.
T Consensus 166 ----------------------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 205 (296)
T cd05051 166 ----------------------------------------NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL 205 (296)
T ss_pred ----------------------------------------CCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence 24688999998764221 122345567899999998
Q ss_pred cCCCCCccceeeeeeeeEeecc--ccccccccCCCce
Q psy2006 288 ELGWAQPCDVWSIGCIIFELYL--GITLMARKTKTKY 322 (351)
Q Consensus 288 ~~~~~~~~DiwslG~~l~~l~t--G~~pf~~~~~~~~ 322 (351)
+..++.++|+|||||++|++++ |..||...+..+.
T Consensus 206 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~ 242 (296)
T cd05051 206 LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV 242 (296)
T ss_pred cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH
Confidence 8888999999999999999987 7889987665554
No 278
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=2.3e-28 Score=221.31 Aligned_cols=194 Identities=22% Similarity=0.251 Sum_probs=159.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~ 73 (351)
+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|+| |+++++.+... ..+
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHER------IVQYYGCLRDRAEKTL 81 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCC------eeeEEEEEEcCCCCEE
Confidence 57999999999999998999999999986421 22345778999999999888 99999998763 588
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++++||+ +++|.+++.... .+++..+..++.|++.+ +.|||+.+++|+|+++.|
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~LH~~~i~H~~l~p~n 136 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEG-----------------------MSYLHSNMIVHRDIKGAN 136 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeCCCCHHH
Confidence 9999999 889999997754 46777777777877777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 137 il~~---------------------------------------------------------------------------- 140 (266)
T cd06651 137 ILRD---------------------------------------------------------------------------- 140 (266)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 8765
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||++..... ......++..|+|||.+.+..++.++|+||+||++|+
T Consensus 141 -------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~e 201 (266)
T cd06651 141 -------------------SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVE 201 (266)
T ss_pred -------------------CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence 134689999998754211 1123457889999999988888999999999999999
Q ss_pred eccccccccccCCCc
Q psy2006 307 LYLGITLMARKTKTK 321 (351)
Q Consensus 307 l~tG~~pf~~~~~~~ 321 (351)
+++|..||...+..+
T Consensus 202 l~~g~~pf~~~~~~~ 216 (266)
T cd06651 202 MLTEKPPWAEYEAMA 216 (266)
T ss_pred HHHCCCCccccchHH
Confidence 999999998665443
No 279
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=1.3e-28 Score=221.29 Aligned_cols=195 Identities=17% Similarity=0.258 Sum_probs=160.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||.|+||.||+|.+. .++.+|+|++.........+.+|+++++.+.|++ |+++++++......|+||||+
T Consensus 10 ~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 10 QEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPK------LVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred eeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCC------eeeEEEEEccCCceEEEEEcCC
Confidence 67999999999999874 5778999999765444567788999999998877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.... ..+++..++.++.|++.+ +.+||+.+++|+|+++.|+.+.
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~h~dl~p~ni~i~---- 134 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEG-----------------------MAYLESSNVIHRDLAARNCLVG---- 134 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccccccceEEEc----
Confidence 889999987654 356777788888888877 9999999999999999999886
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (256)
T cd05112 135 -------------------------------------------------------------------------------- 134 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
....++|+|||++....... ....++..|+|||.+.+..++.++|+||+|+++|++++ |..||.
T Consensus 135 -----------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 203 (256)
T cd05112 135 -----------ENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE 203 (256)
T ss_pred -----------CCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 13468999999876532211 12234568999999988888999999999999999998 999998
Q ss_pred ccCCCce
Q psy2006 316 RKTKTKY 322 (351)
Q Consensus 316 ~~~~~~~ 322 (351)
..+..+.
T Consensus 204 ~~~~~~~ 210 (256)
T cd05112 204 NRSNSEV 210 (256)
T ss_pred cCCHHHH
Confidence 7665443
No 280
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=1.3e-28 Score=224.63 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=163.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||.|++|.||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|++ |+++++++...+..|+||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~------iv~~~~~~~~~~~~~iv~ 77 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPN------IVRLLDVVHSENKLYLVF 77 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCC------ccCHhheeccCCeEEEEE
Confidence 468999999999999998899999999997532 22345778999999999877 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||++++|.+++.......+++..+..++.|++.+ |+|||+++++|+|+++.|+.+.
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------L~~lH~~~~~H~dl~p~nil~~- 133 (283)
T cd07835 78 EFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQG-----------------------IAYCHSHRVLHRDLKPQNLLID- 133 (283)
T ss_pred eccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeCCCCCHHHEEEc-
Confidence 9998899999987654467888888888888888 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (283)
T cd07835 134 -------------------------------------------------------------------------------- 133 (283)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
....++|+|||.+..... ......+++.|+|||.+.+. .++.++|+||+||++|++++|.+|
T Consensus 134 --------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 199 (283)
T cd07835 134 --------------REGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPL 199 (283)
T ss_pred --------------CCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 134689999998764322 12234567889999988764 568899999999999999999999
Q ss_pred ccccCC
Q psy2006 314 MARKTK 319 (351)
Q Consensus 314 f~~~~~ 319 (351)
|...+.
T Consensus 200 f~~~~~ 205 (283)
T cd07835 200 FPGDSE 205 (283)
T ss_pred CCCCCH
Confidence 977654
No 281
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1.3e-28 Score=227.75 Aligned_cols=198 Identities=19% Similarity=0.263 Sum_probs=155.8
Q ss_pred ccccCcccceEEEEEEee-------cCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYE-------VDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
++||+|+||.||+|.+.. +...+|+|++... ......+.+|+.+++.+ +|+| |+++++++...+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~------i~~~~~~~~~~~ 97 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN------IINLLGACTQDG 97 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCC------EeeEEEEEecCC
Confidence 689999999999998653 2357999999753 22335677899999999 5766 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhh
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 136 (351)
..|+||||+ +++|.+++..... ..++...+..++.|++.+ |+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a-----------------------L~ 154 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARG-----------------------ME 154 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHH-----------------------HH
Confidence 999999999 8899999987532 124555566666666666 99
Q ss_pred ccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhh
Q psy2006 137 YNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEAL 216 (351)
Q Consensus 137 ~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l 216 (351)
|||+.|++|||+|+.|+.+.+
T Consensus 155 ~lH~~gi~H~dlkp~Nill~~----------------------------------------------------------- 175 (307)
T cd05098 155 YLASKKCIHRDLAARNVLVTE----------------------------------------------------------- 175 (307)
T ss_pred HHHHCCcccccccHHheEEcC-----------------------------------------------------------
Confidence 999999999999999998862
Q ss_pred cCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCC
Q psy2006 217 RHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGW 291 (351)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~ 291 (351)
...++|+|||.+...... .....+++.|+|||.+.+..+
T Consensus 176 ------------------------------------~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 219 (307)
T cd05098 176 ------------------------------------DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 219 (307)
T ss_pred ------------------------------------CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence 346899999987643211 111233468999999988888
Q ss_pred CCccceeeeeeeeEeecc-ccccccccCCCcee
Q psy2006 292 AQPCDVWSIGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 292 ~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+.++|+||+||++|+|++ |..||.+.+..+.+
T Consensus 220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 999999999999999998 89999876655544
No 282
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=4e-29 Score=246.09 Aligned_cols=192 Identities=20% Similarity=0.249 Sum_probs=146.5
Q ss_pred CccccCcccceEEEEEEeec-CcEEEEE------------------EecchhhhhHHHHHHHHHHHHhCCCCCCCCccee
Q psy2006 1 MCSLNCVASNHVCTNVVYEV-DSVVALK------------------IIKNVEKYREAARLEINALQKIGEKDPNGRHLCV 61 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~-~~~vAiK------------------~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv 61 (351)
+++||+|+||+||+|..+.. +..++.| .+.........+.+|+.+|++++|+| |+
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv 226 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN------IL 226 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC------cC
Confidence 36899999999999986542 2222222 11111223345678999999999888 99
Q ss_pred eeeeeEeeCCeEEEEEeccCCCHHHHHHhcCC---CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcc
Q psy2006 62 KMLDWFDYHGHMCIAFEILGLSVFDFLKENNY---LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYN 138 (351)
Q Consensus 62 ~l~~~f~~~~~~~lV~E~~g~sL~~~l~~~~~---~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 138 (351)
++++++...+..|+|+|+++++|.+++..... .......++.++.|++.| |+||
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~a-----------------------L~yL 283 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCA-----------------------VEYI 283 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHH-----------------------HHHH
Confidence 99999999999999999999999998865431 112234455555555555 9999
Q ss_pred ccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcC
Q psy2006 139 NKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRH 218 (351)
Q Consensus 139 H~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~ 218 (351)
|++|++|||+|+.||.+.
T Consensus 284 H~~gIiHrDLKP~NILl~-------------------------------------------------------------- 301 (501)
T PHA03210 284 HDKKLIHRDIKLENIFLN-------------------------------------------------------------- 301 (501)
T ss_pred HhCCeecCCCCHHHEEEC--------------------------------------------------------------
Confidence 999999999999999886
Q ss_pred CCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecCCCCCc
Q psy2006 219 PFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILELGWAQP 294 (351)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~ 294 (351)
..+.+||+|||++...... .....||+.|+|||++.+..++.+
T Consensus 302 ---------------------------------~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 348 (501)
T PHA03210 302 ---------------------------------CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEI 348 (501)
T ss_pred ---------------------------------CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcH
Confidence 2346899999998653221 224679999999999999999999
Q ss_pred cceeeeeeeeEeeccccccccc
Q psy2006 295 CDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 295 ~DiwslG~~l~~l~tG~~pf~~ 316 (351)
+|||||||++|+|++|..++.+
T Consensus 349 ~DiwSlGvil~ell~~~~~p~~ 370 (501)
T PHA03210 349 TDIWSCGLILLDMLSHDFCPIG 370 (501)
T ss_pred HHHHHHHHHHHHHHHCCCCCcc
Confidence 9999999999999998865443
No 283
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=1.1e-28 Score=226.58 Aligned_cols=195 Identities=22% Similarity=0.303 Sum_probs=162.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~lV 76 (351)
+.||.|+||.||+|.+..+++.||+|.++... .....+.+|+.+++.++|+| |+++++++... ++.|+|
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPN------IVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCC------EEEEEEEEEecCCCcEEEE
Confidence 57999999999999998899999999997532 22234578999999999877 99999999888 799999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
|||++++|.+++.... ..+++..++.++.|++.| |+|||+++++|+|++++|+.+.
T Consensus 85 ~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~a-----------------------L~~LH~~~i~H~dl~p~nili~ 140 (293)
T cd07843 85 MEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSG-----------------------VAHLHDNWILHRDLKTSNLLLN 140 (293)
T ss_pred ehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeccCCHHHEEEC
Confidence 9999889999987754 257888888888888888 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 141 -------------------------------------------------------------------------------- 140 (293)
T cd07843 141 -------------------------------------------------------------------------------- 140 (293)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecCC-CCCccceeeeeeeeEeeccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||.+...... .....+++.|+|||.+.+.. ++.++|+||+||+++++++|.+
T Consensus 141 ---------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (293)
T cd07843 141 ---------------NRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP 205 (293)
T ss_pred ---------------CCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC
Confidence 2346899999987653322 23355678899999987654 5889999999999999999999
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||...+..+
T Consensus 206 ~f~~~~~~~ 214 (293)
T cd07843 206 LFPGKSEID 214 (293)
T ss_pred CCCCCChHH
Confidence 998776543
No 284
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.95 E-value=2e-28 Score=222.76 Aligned_cols=195 Identities=24% Similarity=0.305 Sum_probs=162.5
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhC---CCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIG---EKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~---h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++.||.|+||.||+|.+..+++.||+|.+... ....+.+.+|+++++.+. |++ |+++++++....+.|+
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~------vi~~~~~~~~~~~~~l 79 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPN------ITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCC------eeeEeeeeeeCCEEEE
Confidence 36799999999999999899999999998653 233456788999999997 444 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ +++|.+++... .+++..+..++.|++.+ |.|||+.|++|+|+++.|+.
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~-----------------------l~~lh~~~i~H~dl~p~ni~ 133 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVA-----------------------LKYIHKVGVIHRDIKAANIL 133 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCcCHHHEE
Confidence 99999 88999998653 57788888888888888 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.+
T Consensus 134 i~~----------------------------------------------------------------------------- 136 (277)
T cd06917 134 VTN----------------------------------------------------------------------------- 136 (277)
T ss_pred EcC-----------------------------------------------------------------------------
Confidence 872
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG 310 (351)
...++|+|||.+..... ......|+..|+|||.+.. ..++.++|+||+||++|++++|
T Consensus 137 ------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g 198 (277)
T cd06917 137 ------------------TGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198 (277)
T ss_pred ------------------CCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhC
Confidence 34689999998865322 2234568889999998864 4568899999999999999999
Q ss_pred cccccccCCCce
Q psy2006 311 ITLMARKTKTKY 322 (351)
Q Consensus 311 ~~pf~~~~~~~~ 322 (351)
..||.+.+..+.
T Consensus 199 ~~p~~~~~~~~~ 210 (277)
T cd06917 199 NPPYSDVDAFRA 210 (277)
T ss_pred CCCCCCCChhhh
Confidence 999987665443
No 285
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=2.2e-28 Score=221.99 Aligned_cols=188 Identities=19% Similarity=0.205 Sum_probs=153.7
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCCeEEEEEecc-C
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 81 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g 81 (351)
||.|+||.||++.++.+++.+|+|++...... ..|+.+...+ .|+| |+++++.|..++..|+||||+ +
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~~h~~------iv~~~~~~~~~~~~~iv~e~~~~ 93 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMKDNPN------FIKLYYSVTTLKGHVLIMDYIKD 93 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhhcCCC------EEEEEEEEecCCeeEEEEEcCCC
Confidence 59999999999999999999999999753211 1133333323 3454 999999999999999999999 8
Q ss_pred CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCc
Q psy2006 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSA 161 (351)
Q Consensus 82 ~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s 161 (351)
++|.+++.... .+++..+..++.|++.| +.|||+.|++|+|+++.|+.+.+
T Consensus 94 ~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dl~p~nil~~~---- 144 (267)
T PHA03390 94 GDLFDLLKKEG--KLSEAEVKKIIRQLVEA-----------------------LNDLHKHNIIHNDIKLENVLYDR---- 144 (267)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeCCCCHHHEEEeC----
Confidence 99999998764 67888888888888888 99999999999999999998762
Q ss_pred ccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhc
Q psy2006 162 TFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
T Consensus 145 -------------------------------------------------------------------------------- 144 (267)
T PHA03390 145 -------------------------------------------------------------------------------- 144 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCCc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
....++|+|||.+...... ....+++.|+|||.+.+..++.++|+||+|++++++++|..||...+..+
T Consensus 145 ----------~~~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~ 213 (267)
T PHA03390 145 ----------AKDRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE 213 (267)
T ss_pred ----------CCCeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch
Confidence 1126899999988654322 23467889999999998889999999999999999999999998665443
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=1.6e-28 Score=223.88 Aligned_cols=195 Identities=17% Similarity=0.220 Sum_probs=158.1
Q ss_pred CccccCcccceEEEEEEeecCc----EEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDS----VVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+++||.|+||+||+|.+..+++ .||+|++... ......+.+|+.+++.+.|+| |+.+++++.. ...+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~-~~~~ 84 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY------VCRLLGICLT-STVQ 84 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCC------CceEEEEEcC-CCcE
Confidence 3679999999999999877766 4899998643 233456788999999998877 9999998865 4578
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+++||+ +|+|.+++.... ..+++..+..++.|++.| |.|||+++++|||+|++|+
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~lH~~~iiH~dlkp~Ni 140 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKG-----------------------MSYLEEVRLVHRDLAARNV 140 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccccccceE
Confidence 999999 899999987653 357888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 141 l~~~---------------------------------------------------------------------------- 144 (279)
T cd05109 141 LVKS---------------------------------------------------------------------------- 144 (279)
T ss_pred EEcC----------------------------------------------------------------------------
Confidence 8862
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
...+||+|||++....... ....+++.|++||.+.+..++.++|+|||||++|+++
T Consensus 145 -------------------~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05109 145 -------------------PNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELM 205 (279)
T ss_pred -------------------CCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 2358999999886532211 1223456899999998888999999999999999998
Q ss_pred c-ccccccccCCCc
Q psy2006 309 L-GITLMARKTKTK 321 (351)
Q Consensus 309 t-G~~pf~~~~~~~ 321 (351)
+ |..||......+
T Consensus 206 t~g~~p~~~~~~~~ 219 (279)
T cd05109 206 TFGAKPYDGIPARE 219 (279)
T ss_pred cCCCCCCCCCCHHH
Confidence 8 999997765443
No 287
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=1.8e-28 Score=223.78 Aligned_cols=195 Identities=17% Similarity=0.187 Sum_probs=156.5
Q ss_pred CccccCcccceEEEEEEeecCc----EEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDS----VVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++.||.|+||+||+|.+..+++ .+|+|.+.... .....+..|+.+++++.|+| |+++++++. ....+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~------iv~~~~~~~-~~~~~ 84 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAY------IVRLLGICP-GASLQ 84 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCC------cceEEEEEC-CCccE
Confidence 3679999999999999877776 47777775321 22345677888889998877 999999875 45678
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+++||+ +++|.+++.... ..+++..+..++.|++.| +.|||+++++|+|+|+.|+
T Consensus 85 ~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~-----------------------l~~lH~~~iiH~dlkp~ni 140 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKG-----------------------MYYLEEHRMVHRNLAARNI 140 (279)
T ss_pred EEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeccccCcceE
Confidence 899999 899999998754 357888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 141 li~----------------------------------------------------------------------------- 143 (279)
T cd05111 141 LLK----------------------------------------------------------------------------- 143 (279)
T ss_pred EEc-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
....+||+|||.+...... .....++..|++||.+.+..++.++|+|||||++|+++
T Consensus 144 ------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~ 205 (279)
T cd05111 144 ------------------SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205 (279)
T ss_pred ------------------CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 2346899999988653211 12344567899999998888999999999999999999
Q ss_pred c-ccccccccCCCc
Q psy2006 309 L-GITLMARKTKTK 321 (351)
Q Consensus 309 t-G~~pf~~~~~~~ 321 (351)
+ |..||.+....+
T Consensus 206 t~g~~p~~~~~~~~ 219 (279)
T cd05111 206 SYGAEPYAGMRPHE 219 (279)
T ss_pred cCCCCCCCCCCHHH
Confidence 8 999998765443
No 288
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=1.6e-28 Score=222.29 Aligned_cols=197 Identities=16% Similarity=0.204 Sum_probs=160.2
Q ss_pred ccccCcccceEEEEEEeecCc---EEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS---VVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||.||+|++..+++ .+|+|.+... ....+.+..|+++++.+.|+| |+++.+++...++.++|
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN------IIRLEGVVTKFKPAMII 84 (268)
T ss_pred eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC------eeEEEEEEccCCCcEEE
Confidence 579999999999999876554 7999999753 233456788999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.| ++|||+.|++|+|+++.|+.+
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~a-----------------------l~~lH~~~i~H~dlkp~Nili 140 (268)
T cd05063 85 TEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAG-----------------------MKYLSDMNYVHRDLAARNILV 140 (268)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccccchhhEEE
Confidence 9999 889999987653 357788888888888877 999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 141 ~~------------------------------------------------------------------------------ 142 (268)
T cd05063 141 NS------------------------------------------------------------------------------ 142 (268)
T ss_pred cC------------------------------------------------------------------------------
Confidence 61
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccc------cccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS------TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
...++++|||++........ ....++.|+|||.+.+..++.++|+||+||++|++++
T Consensus 143 -----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~ 205 (268)
T cd05063 143 -----------------NLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205 (268)
T ss_pred -----------------CCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHh
Confidence 34688999998764321111 1122457999999988888999999999999999987
Q ss_pred -ccccccccCCCcee
Q psy2006 310 -GITLMARKTKTKYF 323 (351)
Q Consensus 310 -G~~pf~~~~~~~~~ 323 (351)
|..||...+..+.+
T Consensus 206 ~g~~p~~~~~~~~~~ 220 (268)
T cd05063 206 FGERPYWDMSNHEVM 220 (268)
T ss_pred CCCCCCCcCCHHHHH
Confidence 99999776655443
No 289
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.95 E-value=2.4e-28 Score=221.42 Aligned_cols=196 Identities=18% Similarity=0.242 Sum_probs=158.7
Q ss_pred ccccCcccceEEEEEEeecCc---EEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS---VVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|.+..+++ .||+|++... ....+.+..|+.+++.+.|+| |+++++++..++..++|
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~~~~~~~~~~~lv 83 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN------IIHLEGVVTKSRPVMII 83 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcC------cceEEEEECCCCceEEE
Confidence 579999999999999877665 6999999753 334567889999999999887 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.+ |.|||++|++|+|+++.|+.+
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~a-----------------------l~~lH~~g~~H~dl~p~nili 139 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAG-----------------------MKYLSEMNYVHRDLAARNILV 139 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecccChheEEE
Confidence 9999 889999987654 356777778888888777 999999999999999999887
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 140 ~------------------------------------------------------------------------------- 140 (269)
T cd05065 140 N------------------------------------------------------------------------------- 140 (269)
T ss_pred c-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc-----cccc---ccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-----STIV---STRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-----~~~~---gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
....++++|||.+....... .... .+..|+|||.+.+..++.++|+||+||++|++
T Consensus 141 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~ 204 (269)
T cd05065 141 ----------------SNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 204 (269)
T ss_pred ----------------CCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHH
Confidence 13458889998875422111 1111 13479999999888899999999999999998
Q ss_pred cc-ccccccccCCCce
Q psy2006 308 YL-GITLMARKTKTKY 322 (351)
Q Consensus 308 ~t-G~~pf~~~~~~~~ 322 (351)
++ |..||...+..+.
T Consensus 205 l~~g~~p~~~~~~~~~ 220 (269)
T cd05065 205 MSYGERPYWDMSNQDV 220 (269)
T ss_pred hcCCCCCCCCCCHHHH
Confidence 86 9999987665543
No 290
>KOG0584|consensus
Probab=99.95 E-value=1.6e-29 Score=240.23 Aligned_cols=197 Identities=16% Similarity=0.207 Sum_probs=170.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecc-----hhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--eEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKN-----VEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~~~ 74 (351)
+.||+|+|-+||+|.|..+|-.||.-.++. .....+++..|+.+|+.|+|+| |++++++|.+.. .+.
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~N------Iirfy~SW~d~~n~~in 119 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPN------IIRFYDSWVDTDNKTIN 119 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCc------eeeeeeheecCCCceee
Confidence 469999999999999999999998766543 2334478899999999999888 999999998776 589
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc--ccccccCCC
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK--REVRRVRRC 151 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~d~k~~ 151 (351)
+|+|.+ .|+|+.|.++.+ .+....++.|++||+.| |.|||++. |+|||+|.+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkG-----------------------L~yLHs~~PPIIHRDLKCD 174 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKG-----------------------LVYLHSQDPPIIHRDLKCD 174 (632)
T ss_pred eeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHH-----------------------hhhhhcCCCCccccccccc
Confidence 999999 999999999986 68888999999999999 99999986 899999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
||.+.-
T Consensus 175 NIFinG-------------------------------------------------------------------------- 180 (632)
T KOG0584|consen 175 NIFVNG-------------------------------------------------------------------------- 180 (632)
T ss_pred eEEEcC--------------------------------------------------------------------------
Confidence 998871
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceec-cccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
..+.|||+|+|++.... ....+.+|||.|||||... ..|+..+||||||+++.||+|+
T Consensus 181 --------------------~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~ 239 (632)
T KOG0584|consen 181 --------------------NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTS 239 (632)
T ss_pred --------------------CcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhc
Confidence 35789999999998743 3444579999999999984 8899999999999999999999
Q ss_pred cccccccCCCceee
Q psy2006 311 ITLMARKTKTKYFY 324 (351)
Q Consensus 311 ~~pf~~~~~~~~~~ 324 (351)
.+||...+..-.+|
T Consensus 240 eYPYsEC~n~AQIY 253 (632)
T KOG0584|consen 240 EYPYSECTNPAQIY 253 (632)
T ss_pred cCChhhhCCHHHHH
Confidence 99998877665554
No 291
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=3.5e-28 Score=217.75 Aligned_cols=195 Identities=17% Similarity=0.238 Sum_probs=159.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||.||+|.. .+++.+|+|++... ......+.+|+++++.+.|+| |+++++++...+..++||||
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPN------IVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCC------cCeEEEEEecCCccEEEEEC
Confidence 5799999999999985 57889999998753 233446788999999998887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.... ..+++..+..++.|++.+ |.|+|+.|++|+|++++|+.+.+
T Consensus 74 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~~~H~dl~p~nili~~- 128 (250)
T cd05085 74 VPGGDFLSFLRKKK-DELKTKQLVKFALDAAAG-----------------------MAYLESKNCIHRDLAARNCLVGE- 128 (250)
T ss_pred CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeecccChheEEEcC-
Confidence 9 899999987654 346777777777777777 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 129 -------------------------------------------------------------------------------- 128 (250)
T cd05085 129 -------------------------------------------------------------------------------- 128 (250)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-cccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~p 313 (351)
...++|+|||++....... ....+++.|+|||.+.+..++.++|+||+|+++|++++ |..|
T Consensus 129 --------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p 194 (250)
T cd05085 129 --------------NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCP 194 (250)
T ss_pred --------------CCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence 3458999999886532221 12233567999999988888999999999999999998 9999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|.+.+..+.
T Consensus 195 ~~~~~~~~~ 203 (250)
T cd05085 195 YPGMTNQQA 203 (250)
T ss_pred CCCCCHHHH
Confidence 987655443
No 292
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=2.1e-28 Score=224.36 Aligned_cols=199 Identities=16% Similarity=0.203 Sum_probs=154.8
Q ss_pred CccccCcccceEEEEEEee-----cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+++||.|+||.||+|.++. .+..||+|.+.... .....+.+|+.+++.++|+| |+++++++......
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~ 84 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH------VVRLLGVVSKGQPT 84 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCC------eeeEEEEEcCCCCc
Confidence 3689999999999997652 35689999986432 22345678999999999877 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCC--------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccc
Q psy2006 74 CIAFEIL-GLSVFDFLKENNY--------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKRE 144 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~--------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 144 (351)
|+||||+ +++|.++++.... .......+..++.|++.| |.|||+++++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~ 141 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG-----------------------MAYLNAKKFV 141 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCCc
Confidence 9999999 8999999976431 112233445555555555 9999999999
Q ss_pred ccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 145 VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 145 h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
|||+|+.|+.+.+
T Consensus 142 H~dikp~nili~~------------------------------------------------------------------- 154 (288)
T cd05061 142 HRDLAARNCMVAH------------------------------------------------------------------- 154 (288)
T ss_pred CCCCChheEEEcC-------------------------------------------------------------------
Confidence 9999999998862
Q ss_pred CchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceee
Q psy2006 225 PSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
...++|+|||++..... ......++..|+|||.+.+..++.++|+||
T Consensus 155 ----------------------------~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvws 206 (288)
T cd05061 155 ----------------------------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWS 206 (288)
T ss_pred ----------------------------CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHH
Confidence 34689999998764211 112234567899999998888899999999
Q ss_pred eeeeeEeecc-ccccccccCCCcee
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+||+++++++ |..||.+.+..+++
T Consensus 207 lG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 207 FGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999998 89999876655543
No 293
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=1.8e-28 Score=229.08 Aligned_cols=194 Identities=12% Similarity=0.085 Sum_probs=153.9
Q ss_pred ccccCc--ccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCV--ASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.| +||+||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|+| |++++++|...++.|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~n------iv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPN------IMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------cceEeeeEecCCceEEE
Confidence 357777 99999999999999999999997532 23456788999999999888 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.......+++..++.++.|++.| |+|||+.|++|||+|+.|+.+
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~a-----------------------L~~lH~~~ivHrDlkp~Nill 134 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRG-----------------------LNYLHQNGYIHRNIKASHILI 134 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEEE
Confidence 9999 8899999988755568888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+-
T Consensus 135 ~~~----------------------------------------------------------------------------- 137 (328)
T cd08226 135 SGD----------------------------------------------------------------------------- 137 (328)
T ss_pred eCC-----------------------------------------------------------------------------
Confidence 721
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceec----------cccccccccceeeCceeeecC--CCCCccceeeeeee
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD----------EHHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCI 303 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~----------~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~ 303 (351)
..++++||+.+.... .......++..|+|||.+.+. .++.++|+||+||+
T Consensus 138 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~ 199 (328)
T cd08226 138 ------------------GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT 199 (328)
T ss_pred ------------------CcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 223444443221100 000112235679999999763 46889999999999
Q ss_pred eEeeccccccccccCC
Q psy2006 304 IFELYLGITLMARKTK 319 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~ 319 (351)
++++++|..||.....
T Consensus 200 l~el~~g~~p~~~~~~ 215 (328)
T cd08226 200 ACELATGRVPFQDMLR 215 (328)
T ss_pred HHHHHhCCCCCCCcCh
Confidence 9999999999987654
No 294
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95 E-value=2.5e-28 Score=219.27 Aligned_cols=194 Identities=21% Similarity=0.321 Sum_probs=163.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|++ |+++++++......++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~l 79 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPN------IVQYLGTEREEDNLYI 79 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCC------chheeeeEecCCeEEE
Confidence 57999999999999998899999999986532 23456788999999999887 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|+||+ +++|.+++.+.. .+++..+..++.|++.+ +.|||+.|++|+|+++.|+.
T Consensus 80 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~~~ni~ 134 (258)
T cd06632 80 FLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLG-----------------------LEYLHDRNTVHRDIKGANIL 134 (258)
T ss_pred EEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEE
Confidence 99999 889999998764 46777788888888777 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (258)
T cd06632 135 VD------------------------------------------------------------------------------ 136 (258)
T ss_pred EC------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceeccc--cccccccceeeCceeeecCC-CCCccceeeeeeeeEeecccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH--HSTIVSTRHYRAPEVILELG-WAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~tG~ 311 (351)
....+||+|||.+...... .....|++.|++||.+.... ++.++|+||+||++|++++|.
T Consensus 137 -----------------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 137 -----------------TNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred -----------------CCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 2346899999987653222 24466888999999987666 889999999999999999999
Q ss_pred ccccccCCCc
Q psy2006 312 TLMARKTKTK 321 (351)
Q Consensus 312 ~pf~~~~~~~ 321 (351)
.||...+..+
T Consensus 200 ~pf~~~~~~~ 209 (258)
T cd06632 200 PPWSQLEGVA 209 (258)
T ss_pred CCcccCcHHH
Confidence 9997766433
No 295
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=1.2e-28 Score=222.45 Aligned_cols=191 Identities=24% Similarity=0.288 Sum_probs=163.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||.||+|.+..+++.||+|.+... ......+.+|+++++.+.|+| |+++++.+...+..++|+||
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY------IVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCc------hhhhheeeecCCEEEEEEEe
Confidence 5799999999999999989999999998754 234456788999999998777 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEee
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLID 157 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~D 157 (351)
+ +++|.+++.... ..+++..+..++.|++.+ +.|+|+ .+++|+|++++|+.+.
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~~i~H~dl~~~ni~~~- 135 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKG-----------------------LTYLHEKHKIIHRDVKPSNILVN- 135 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHcCCCCeecCCCCHHHEEEC-
Confidence 9 699999998764 467888888888888888 999999 9999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (265)
T cd06605 136 -------------------------------------------------------------------------------- 135 (265)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc-cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
..+.++|+|||.+...... .....++..|+|||.+.+..++.++|+||+||+++++++|..||..
T Consensus 136 --------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 136 --------------SRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred --------------CCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 2346899999987653221 1226778899999999888899999999999999999999999976
Q ss_pred c
Q psy2006 317 K 317 (351)
Q Consensus 317 ~ 317 (351)
.
T Consensus 202 ~ 202 (265)
T cd06605 202 E 202 (265)
T ss_pred c
Confidence 5
No 296
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=2.5e-28 Score=221.17 Aligned_cols=196 Identities=17% Similarity=0.201 Sum_probs=159.2
Q ss_pred ccccCcccceEEEEEEeecCc---EEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS---VVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||+|+||.||+|.+..++. .+|+|.++.. ....+.+.+|+.+++.++|+| |+++++++..++..|+|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN------IIHLEGVVTKSKPVMIV 83 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCC------cceEEEEEecCCccEEE
Confidence 679999999999999865443 7999998753 233457788999999998877 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.+ +.+||+.+++|+|+++.|+.+
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~-----------------------l~~lH~~~i~h~dlkp~nili 139 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASG-----------------------MKYLSDMGYVHRDLAARNILV 139 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeehhhchhcEEE
Confidence 9999 889999998764 356777777777777777 999999999999999999977
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 140 ~------------------------------------------------------------------------------- 140 (267)
T cd05066 140 N------------------------------------------------------------------------------- 140 (267)
T ss_pred C-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
....++++|||.+....... ....++..|++||.+.+..++.++|+|||||+++++++
T Consensus 141 ----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~ 204 (267)
T cd05066 141 ----------------SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204 (267)
T ss_pred ----------------CCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhc
Confidence 13468899999876532211 11223467999999988889999999999999999776
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..||...+..+.
T Consensus 205 ~g~~p~~~~~~~~~ 218 (267)
T cd05066 205 YGERPYWEMSNQDV 218 (267)
T ss_pred CCCCCcccCCHHHH
Confidence 9999987765543
No 297
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95 E-value=1.8e-28 Score=225.06 Aligned_cols=197 Identities=23% Similarity=0.309 Sum_probs=159.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCC-CCCCCCcceeeeeeeEeeCCe-----
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGE-KDPNGRHLCVKMLDWFDYHGH----- 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h-~~~~g~~~Iv~l~~~f~~~~~----- 72 (351)
+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.| ++ |+++++.+.....
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~------i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIY------IVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCC------ccceeeeEeecCCCCCce
Confidence 57999999999999999999999999987532 223567789999999964 55 9999999987765
Q ss_pred EEEEEeccCCCHHHHHHhcC---CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 73 MCIAFEILGLSVFDFLKENN---YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~---~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
.|+||||+.++|.+++.... ...+++..+..++.|++.+ |.|||+++++|||++
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~i~H~dl~ 137 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG-----------------------VAHCHKHGVMHRDLK 137 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCC
Confidence 89999999779999987653 2356777788878877777 999999999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
++|+.+.+
T Consensus 138 ~~nil~~~------------------------------------------------------------------------ 145 (295)
T cd07837 138 PQNLLVDK------------------------------------------------------------------------ 145 (295)
T ss_pred hHHEEEec------------------------------------------------------------------------
Confidence 99998861
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeec-CCCCCccceeeeeeeeE
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 305 (351)
....++|+|||.+...... .....+++.|+|||.+.+ ..++.++|+||+||++|
T Consensus 146 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~ 203 (295)
T cd07837 146 ----------------------QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFA 203 (295)
T ss_pred ----------------------CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHH
Confidence 1356899999988643221 123456788999998865 45689999999999999
Q ss_pred eeccccccccccCCCc
Q psy2006 306 ELYLGITLMARKTKTK 321 (351)
Q Consensus 306 ~l~tG~~pf~~~~~~~ 321 (351)
+|++|..||.+.+..+
T Consensus 204 ~l~~g~~~~~~~~~~~ 219 (295)
T cd07837 204 EMSRKQPLFPGDSELQ 219 (295)
T ss_pred HHHcCCCCCCCCCHHH
Confidence 9999999998765443
No 298
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.95 E-value=6.2e-28 Score=220.66 Aligned_cols=190 Identities=19% Similarity=0.227 Sum_probs=154.8
Q ss_pred CccccCcccceEEEEEE----eecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--Ce
Q psy2006 1 MCSLNCVASNHVCTNVV----YEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GH 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~ 72 (351)
+++||+|+||.||+|.. ..+++.||+|.+... ....+.+.+|+++++.+.|+| |+++++++... ..
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~ 82 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN------IVKYKGICTEDGGNG 82 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCC------eeeeeeEEecCCCCc
Confidence 46899999999999974 357899999999743 233456789999999999887 99999998876 47
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.++||||+ +++|.+++.+.. ..+++..+..++.|++.+ |+|+|++|++|||+|+.
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~a-----------------------L~~lH~~gi~H~dlkp~ 138 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKG-----------------------MDYLGSRQYVHRDLAAR 138 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecccchh
Confidence 89999999 899999987653 246777778888888777 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.+
T Consensus 139 Nil~~~-------------------------------------------------------------------------- 144 (284)
T cd05079 139 NVLVES-------------------------------------------------------------------------- 144 (284)
T ss_pred eEEEcC--------------------------------------------------------------------------
Confidence 998861
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
...++|+|||++...... .....++..|+|||.+.+..++.++|+||+||+++
T Consensus 145 ---------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ 203 (284)
T cd05079 145 ---------------------EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLY 203 (284)
T ss_pred ---------------------CCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhh
Confidence 345899999987643211 12344566799999998888899999999999999
Q ss_pred eecccccccc
Q psy2006 306 ELYLGITLMA 315 (351)
Q Consensus 306 ~l~tG~~pf~ 315 (351)
+++|+..|+.
T Consensus 204 ellt~~~~~~ 213 (284)
T cd05079 204 ELLTYCDSES 213 (284)
T ss_pred hhhcCCCCCc
Confidence 9999877653
No 299
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=7.6e-29 Score=223.52 Aligned_cols=201 Identities=18% Similarity=0.167 Sum_probs=158.1
Q ss_pred ccccCcccceEEEEEEeecCc-------EEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS-------VVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~-------~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
++||.|+||+||+|.+...+. .||+|.+.... ...+.+..|+.+++.+.|+| |+++++++..+++.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~------iv~~~~~~~~~~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH------LVLNYGVCVCGDES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCC------hhheeeEEEeCCCc
Confidence 579999999999999865443 48899986543 33456778999999998887 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++||||+ +++|.++++.... .+++..+..++.|++.+ +.|||+++++|||+|+.|
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~-----------------------l~~lH~~~iiH~dlkp~n 130 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWA-----------------------LHFLEDKGLTHGNVCAKN 130 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCccce
Confidence 9999999 8899999987642 56777788888888877 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+-|..+.
T Consensus 131 ili~~~~~~~~--------------------------------------------------------------------- 141 (258)
T cd05078 131 VLLIREEDRKT--------------------------------------------------------------------- 141 (258)
T ss_pred EEEeccccccc---------------------------------------------------------------------
Confidence 99873211000
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccc-
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLG- 310 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG- 310 (351)
.....++++|||.+.... ......+++.|+|||++.+. .++.++|+||+||++|++++|
T Consensus 142 ------------------~~~~~~~l~d~g~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~ 202 (258)
T cd05078 142 ------------------GNPPFIKLSDPGISITVL-PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGG 202 (258)
T ss_pred ------------------CCCceEEecccccccccC-CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCC
Confidence 012358899999875432 22335678899999999764 468899999999999999998
Q ss_pred cccccccCCC
Q psy2006 311 ITLMARKTKT 320 (351)
Q Consensus 311 ~~pf~~~~~~ 320 (351)
..||...+..
T Consensus 203 ~~~~~~~~~~ 212 (258)
T cd05078 203 DKPLSALDSQ 212 (258)
T ss_pred CCChhhccHH
Confidence 4666555443
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=3.5e-28 Score=222.61 Aligned_cols=192 Identities=19% Similarity=0.296 Sum_probs=162.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
++||.|++|.||++.+..+++.+|+|++.... ...+.+.+|+.+++.+.|++ |++++++|...++.|+|+||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~------vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPN------IVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCC------hheEEEEEEcCCeEEEEEecc
Confidence 57999999999999998899999999986432 33456788999999998877 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ +.++|+.|++|||+++.|+.+.+
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~dl~p~Nil~~~-- 150 (285)
T cd06648 99 EGGALTDIVTHT---RMNEEQIATVCLAVLKA-----------------------LSFLHAQGVIHRDIKSDSILLTS-- 150 (285)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCChhhEEEcC--
Confidence 89999998772 47777888888888887 99999999999999999998862
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 151 -------------------------------------------------------------------------------- 150 (285)
T cd06648 151 -------------------------------------------------------------------------------- 150 (285)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||.+..... ......|++.|+|||.+.+..++.++|+||+||+++++++|..||..
T Consensus 151 -------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~ 217 (285)
T cd06648 151 -------------DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN 217 (285)
T ss_pred -------------CCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence 34689999997754221 12335688999999999888889999999999999999999999977
Q ss_pred cCCC
Q psy2006 317 KTKT 320 (351)
Q Consensus 317 ~~~~ 320 (351)
.+..
T Consensus 218 ~~~~ 221 (285)
T cd06648 218 EPPL 221 (285)
T ss_pred CCHH
Confidence 5543
No 301
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=2.9e-28 Score=223.66 Aligned_cols=197 Identities=19% Similarity=0.232 Sum_probs=157.5
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||+|+||.||+|.+.. ++..+|+|.+.... ...+.+.+|+.+++.++|+| |+++++++...+..++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~l 84 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH------IVKFYGVCGDGDPLIM 84 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCC------cceEEEEEccCCceEE
Confidence 579999999999998643 45679999987543 33456889999999999877 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc
Q psy2006 76 AFEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~ 140 (351)
||||+ +++|.+++..... ..+++..+..++.|++.+ +.|||+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a-----------------------l~~lH~ 141 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG-----------------------MVYLAS 141 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHH-----------------------HHHHHh
Confidence 99999 8999999976532 124455555555555555 999999
Q ss_pred ccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCC
Q psy2006 141 KKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220 (351)
Q Consensus 141 ~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~ 220 (351)
+|++|||+|+.|+.+.+
T Consensus 142 ~~i~H~dlkp~Nil~~~--------------------------------------------------------------- 158 (291)
T cd05094 142 QHFVHRDLATRNCLVGA--------------------------------------------------------------- 158 (291)
T ss_pred CCeeecccCcceEEEcc---------------------------------------------------------------
Confidence 99999999999998862
Q ss_pred CCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCcc
Q psy2006 221 FDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPC 295 (351)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~ 295 (351)
...++|+|||++..... ......+++.|+|||.+.+..++.++
T Consensus 159 --------------------------------~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 206 (291)
T cd05094 159 --------------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206 (291)
T ss_pred --------------------------------CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchh
Confidence 34689999998764221 11234557889999999888899999
Q ss_pred ceeeeeeeeEeecc-ccccccccCCCce
Q psy2006 296 DVWSIGCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 296 DiwslG~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
|+|||||++|+|+| |..||...+..+.
T Consensus 207 Di~slG~il~el~t~g~~p~~~~~~~~~ 234 (291)
T cd05094 207 DVWSFGVILWEIFTYGKQPWFQLSNTEV 234 (291)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999998 9999977665443
No 302
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=9.6e-29 Score=223.79 Aligned_cols=202 Identities=16% Similarity=0.216 Sum_probs=159.4
Q ss_pred ccccCcccceEEEEEEeecC------cEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYEVD------SVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~------~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+.||.|+||.||+|.+.... +.+|+|.+.... .....+.+|+++++.+.|++ |+++++++...+..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~ 74 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN------IVKLLGVCLLNEPQ 74 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCC------eeeEeeeecCCCCe
Confidence 47999999999999976543 789999986532 34556788999999999888 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCC-----CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 74 CIAFEIL-GLSVFDFLKENNY-----LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~-----~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
++||||+ +++|.+++..... ..+++..+..++.|++.+ +.|+|+++++|+|
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~H~d 131 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKG-----------------------CVYLEQMHFIHRD 131 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCC
Confidence 9999999 8999999976421 235566666666666666 9999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+++.|+.+.+-+.
T Consensus 132 l~p~nil~~~~~~------------------------------------------------------------------- 144 (269)
T cd05044 132 LAARNCLVSEKGY------------------------------------------------------------------- 144 (269)
T ss_pred CChheEEEecCCC-------------------------------------------------------------------
Confidence 9999998872110
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGC 302 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 302 (351)
.....++++|||++..... ......++..|+|||.+.+..++.++|+|||||
T Consensus 145 -----------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 201 (269)
T cd05044 145 -----------------------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGV 201 (269)
T ss_pred -----------------------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHH
Confidence 0123689999998764221 112234567899999998888999999999999
Q ss_pred eeEeecc-ccccccccCCCce
Q psy2006 303 IIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 303 ~l~~l~t-G~~pf~~~~~~~~ 322 (351)
++|++++ |..||...+..+.
T Consensus 202 il~ellt~g~~p~~~~~~~~~ 222 (269)
T cd05044 202 LMWEILTLGQQPYPALNNQEV 222 (269)
T ss_pred HHHHHHHcCCCCCcccCHHHH
Confidence 9999998 9999987665544
No 303
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=4.9e-28 Score=219.00 Aligned_cols=200 Identities=17% Similarity=0.103 Sum_probs=156.7
Q ss_pred ccccCcccceEEEEEEee------------cCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEe
Q psy2006 2 CSLNCVASNHVCTNVVYE------------VDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD 68 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~------------~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~ 68 (351)
+.||+|+||.||+|.... ....||+|++.... .....+..|+.+++.+.|+| |+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~------iv~~~~~~~ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKH------IVLLYGVCV 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCC------EeeEEEEEe
Confidence 579999999999998532 23368999987543 23346678899999999888 999999999
Q ss_pred eCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 69 YHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 69 ~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
.+...++||||+ +++|..++.... ..+++..+..++.|++.| ++|||+++++|||
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~-----------------------l~~lH~~~ivH~d 130 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASA-----------------------LSYLEDKDLVHGN 130 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHhhhCCeECCC
Confidence 999999999999 788888876543 357888888888888888 9999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|+.|+.+...|...
T Consensus 131 lkp~Nill~~~~~~~----------------------------------------------------------------- 145 (262)
T cd05077 131 VCTKNILLAREGIDG----------------------------------------------------------------- 145 (262)
T ss_pred CCcccEEEecCCccC-----------------------------------------------------------------
Confidence 999999987322100
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeee-cCCCCCccceeeeeeeeEe
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~~ 306 (351)
.....++++|||.+..... .....++..|+|||.+. +..++.++|+|||||++|+
T Consensus 146 -----------------------~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~e 201 (262)
T cd05077 146 -----------------------ECGPFIKLSDPGIPITVLS-RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWE 201 (262)
T ss_pred -----------------------CCCceeEeCCCCCCccccC-cccccccccccChhhhcCCCCCCchhHHHHHHHHHHH
Confidence 0123489999998754322 23456788899999886 4667899999999999999
Q ss_pred ec-cccccccccCCC
Q psy2006 307 LY-LGITLMARKTKT 320 (351)
Q Consensus 307 l~-tG~~pf~~~~~~ 320 (351)
++ +|..||...+..
T Consensus 202 l~~~~~~p~~~~~~~ 216 (262)
T cd05077 202 ICYNGEIPLKDKTLA 216 (262)
T ss_pred HHhCCCCCCCCcchh
Confidence 97 689998766543
No 304
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.95 E-value=1.8e-28 Score=224.06 Aligned_cols=194 Identities=26% Similarity=0.408 Sum_probs=160.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.+.|+| |+++++.|...+..++|||
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN------IVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCC------eeehhheEEECCEEEEEEe
Confidence 57999999999999999899999999987532 23467789999999999877 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|+++++.+.+.... ..+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.+
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~dl~~~ni~~~~- 135 (288)
T cd07833 81 YVERTLLELLEASP-GGLPPDAVRSYIWQLLQA-----------------------IAYCHSHNIIHRDIKPENILVSE- 135 (288)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHeEECC-
Confidence 99555555544433 246777777777777777 99999999999999999998862
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 136 -------------------------------------------------------------------------------- 135 (288)
T cd07833 136 -------------------------------------------------------------------------------- 135 (288)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++|+|||.+..... ......++..|+|||.+.+. .++.++|+||+|++++++++|.+|
T Consensus 136 --------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~ 201 (288)
T cd07833 136 --------------SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPL 201 (288)
T ss_pred --------------CCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 35689999998765332 22345678899999999887 779999999999999999999999
Q ss_pred ccccCCC
Q psy2006 314 MARKTKT 320 (351)
Q Consensus 314 f~~~~~~ 320 (351)
|.+.+..
T Consensus 202 ~~~~~~~ 208 (288)
T cd07833 202 FPGDSDI 208 (288)
T ss_pred CCCCCHH
Confidence 9876543
No 305
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=2.1e-28 Score=225.97 Aligned_cols=194 Identities=22% Similarity=0.364 Sum_probs=158.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------- 71 (351)
++||+|+||.||+|.+..+++.||+|.+.... .......+|+++++.+.|++ |+++++++...+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHEN------VVNLIEICRTKATPYNRYK 91 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCC------ccceEEEEecccccccCCC
Confidence 57999999999999999999999999986432 22335568999999999888 999999987654
Q ss_pred -eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 -HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 -~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
+.++||||++++|.+++.... ..+++..++.++.|++.| |.|||++|++|+|+++
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~a-----------------------l~~lH~~~i~H~dl~p 147 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNG-----------------------LYYIHRNKILHRDMKA 147 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCH
Confidence 569999999889999887653 357888888888888888 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.
T Consensus 148 ~nil~~-------------------------------------------------------------------------- 153 (310)
T cd07865 148 ANILIT-------------------------------------------------------------------------- 153 (310)
T ss_pred HHEEEC--------------------------------------------------------------------------
Confidence 999876
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-------cccccccceeeCceeeecC-CCCCccceeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-------HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGC 302 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~ 302 (351)
....++|+|||++...... .....++..|+|||.+.+. .++.++|+||+|+
T Consensus 154 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 212 (310)
T cd07865 154 ---------------------KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC 212 (310)
T ss_pred ---------------------CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence 2346889999987643211 1234567889999988664 4688999999999
Q ss_pred eeEeeccccccccccCCC
Q psy2006 303 IIFELYLGITLMARKTKT 320 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~~~ 320 (351)
++|++++|..||.+.+..
T Consensus 213 ~l~el~t~~~~~~~~~~~ 230 (310)
T cd07865 213 IMAEMWTRSPIMQGNTEQ 230 (310)
T ss_pred HHHHHHhCCCCCCCCCHH
Confidence 999999999999876543
No 306
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.95 E-value=2.4e-28 Score=221.56 Aligned_cols=197 Identities=15% Similarity=0.138 Sum_probs=155.3
Q ss_pred ccccCcccceEEEEEEeecCc--EEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS--VVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH------ 70 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~------ 70 (351)
++||+|+||.||+|.+..+++ .||+|.++.. ....+.+.+|+.+++.++|+| |+++++.+...
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPN------VMRLIGVCLQTVESEGY 78 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCC------cceEEEEEccCCcccCC
Confidence 679999999999999876665 6999998653 334566788999999999888 99999876432
Q ss_pred CeEEEEEecc-CCCHHHHHHhcC----CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccc
Q psy2006 71 GHMCIAFEIL-GLSVFDFLKENN----YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREV 145 (351)
Q Consensus 71 ~~~~lV~E~~-g~sL~~~l~~~~----~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 145 (351)
...++||||+ +++|.+++.... ...+++..+..++.|++.| |+|||+++++|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H 135 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG-----------------------MEYLSSKSFIH 135 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeec
Confidence 2679999999 899999885431 1236677777777777777 99999999999
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
||+|+.|+.+.
T Consensus 136 ~dlkp~Nil~~--------------------------------------------------------------------- 146 (272)
T cd05075 136 RDLAARNCMLN--------------------------------------------------------------------- 146 (272)
T ss_pred cccchhheEEc---------------------------------------------------------------------
Confidence 99999999775
Q ss_pred chhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeee
Q psy2006 226 SSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
....++|+|||++...... .....+++.|++||.+.+..++.++|+|||
T Consensus 147 --------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl 200 (272)
T cd05075 147 --------------------------ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSF 200 (272)
T ss_pred --------------------------CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence 1345889999988653221 122345678999999988889999999999
Q ss_pred eeeeEeecc-ccccccccCCCce
Q psy2006 301 GCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 301 G~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
||++|++++ |..||.+.+..+.
T Consensus 201 G~il~el~~~g~~p~~~~~~~~~ 223 (272)
T cd05075 201 GVTMWEIATRGQTPYPGVENSEI 223 (272)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999998 8999987655443
No 307
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95 E-value=2.6e-28 Score=223.34 Aligned_cols=193 Identities=22% Similarity=0.270 Sum_probs=157.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||.|+||.||++.+..+++.||+|.+.... .....+.+|+.++.++. |++ |+++++++..++..++|||
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~------iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPY------IVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCC------EeeeeeEEecCCcEEEEEe
Confidence 57999999999999999999999999997532 33456788999999986 666 9999999999999999999
Q ss_pred ccCCCHHHHHH---hcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCeE
Q psy2006 79 ILGLSVFDFLK---ENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDIR 154 (351)
Q Consensus 79 ~~g~sL~~~l~---~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni~ 154 (351)
|+++++.++.. ......+++..+..++.|++.+ |+|||+. +++|||+++.|+.
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~-----------------------l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKA-----------------------LNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH-----------------------HHHHhhcCCeeccCCCHHHEE
Confidence 99877766543 2233467888888888888887 9999974 9999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 141 ~~------------------------------------------------------------------------------ 142 (288)
T cd06616 141 LD------------------------------------------------------------------------------ 142 (288)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecC---CCCCccceeeeeeeeEeecc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILEL---GWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~t 309 (351)
....++|+|||++..... ......|++.|+|||.+.+. .++.++|+||+||++|++++
T Consensus 143 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 205 (288)
T cd06616 143 -----------------RNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVAT 205 (288)
T ss_pred -----------------cCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHh
Confidence 234689999998864322 22334678899999998765 57899999999999999999
Q ss_pred ccccccccC
Q psy2006 310 GITLMARKT 318 (351)
Q Consensus 310 G~~pf~~~~ 318 (351)
|..||....
T Consensus 206 g~~p~~~~~ 214 (288)
T cd06616 206 GKFPYPKWN 214 (288)
T ss_pred CCCCchhcc
Confidence 999997654
No 308
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=4.2e-28 Score=217.33 Aligned_cols=194 Identities=18% Similarity=0.248 Sum_probs=160.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||.|+||.||+|.+.. ++.||+|.+.... .....+..|+++++.+.|++ |+++++++....+.++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPN------IVKLIGVCVQKQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------eEEEEEEEecCCCeEEEEEc
Confidence 589999999999999876 9999999987532 23467788999999999887 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.... ..+++..+..++.|++.+ +.|||+++++|||+++.|+.+.
T Consensus 74 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~-----------------------l~~lH~~~i~h~di~p~nili~-- 127 (251)
T cd05041 74 VPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAG-----------------------MEYLESKNCIHRDLAARNCLVG-- 127 (251)
T ss_pred CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEehhhcCcceEEEc--
Confidence 9 899999987653 256777788888888877 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (251)
T cd05041 128 -------------------------------------------------------------------------------- 127 (251)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecccc-----ccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GIT 312 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~ 312 (351)
....++|+|||++....... ....++..|+|||.+.+..++.++|+|||||+++++++ |..
T Consensus 128 -------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~ 194 (251)
T cd05041 128 -------------ENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDT 194 (251)
T ss_pred -------------CCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCC
Confidence 23468999999886533111 11223456999999988888999999999999999998 899
Q ss_pred cccccCCCc
Q psy2006 313 LMARKTKTK 321 (351)
Q Consensus 313 pf~~~~~~~ 321 (351)
||...+..+
T Consensus 195 p~~~~~~~~ 203 (251)
T cd05041 195 PYPGMSNQQ 203 (251)
T ss_pred CCccCCHHH
Confidence 997766444
No 309
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.95 E-value=2.2e-28 Score=224.92 Aligned_cols=207 Identities=16% Similarity=0.211 Sum_probs=154.6
Q ss_pred ccccCcccceEEEEEEeec--------------CcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeee
Q psy2006 2 CSLNCVASNHVCTNVVYEV--------------DSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLD 65 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~--------------~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~ 65 (351)
++||+|+||.||+|.+... ...||+|++... ....+.+.+|+++++.++|++ |+++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~------i~~~~~ 84 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPN------IIRLLG 84 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCC------cCeEEE
Confidence 6799999999999987543 235999999753 233456788999999999887 999999
Q ss_pred eEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccc
Q psy2006 66 WFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKRE 144 (351)
Q Consensus 66 ~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 144 (351)
++...+..|+||||+ +++|.+++........ ....++....++..+..++.|++.|+.|||+++++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~ 151 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIEST-------------FTHANNIPSVSIANLLYMAVQIASGMKYLASLNFV 151 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhcccccc-------------ccccccCCcccHHHHHHHHHHHHHHHHHHHhcCee
Confidence 999999999999999 8999999865421000 00011112233444444445555559999999999
Q ss_pred ccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 145 VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 145 h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
|+|+|+.|+.+.+
T Consensus 152 H~dlkp~Nill~~------------------------------------------------------------------- 164 (295)
T cd05097 152 HRDLATRNCLVGN------------------------------------------------------------------- 164 (295)
T ss_pred ccccChhhEEEcC-------------------------------------------------------------------
Confidence 9999999998862
Q ss_pred CchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceee
Q psy2006 225 PSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
...+||+|||++...... .....+++.|+|||.+.+..++.++|+||
T Consensus 165 ----------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 165 ----------------------------HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred ----------------------------CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 345899999987642111 12234467899999998888999999999
Q ss_pred eeeeeEeecc--ccccccccCCCce
Q psy2006 300 IGCIIFELYL--GITLMARKTKTKY 322 (351)
Q Consensus 300 lG~~l~~l~t--G~~pf~~~~~~~~ 322 (351)
|||+++++++ |..||...+..+.
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999987 7789987665543
No 310
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.95 E-value=1e-28 Score=225.57 Aligned_cols=193 Identities=22% Similarity=0.367 Sum_probs=158.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+++||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.++|+| |++++++|...++.|+||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHEN------LVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcc------hhhHHHhcccCCeEEEEE
Confidence 468999999999999998889999999986432 22456778999999999887 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.++..... .+++..++.++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 80 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~h~~l~p~ni~~~ 134 (286)
T cd07846 80 EFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRG-----------------------IEFCHSHNIIHRDIKPENILVS 134 (286)
T ss_pred ecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCCHHHEEEC
Confidence 999 666666554432 47788888888888877 9999999999999999999876
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (286)
T cd07846 135 -------------------------------------------------------------------------------- 134 (286)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccc
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
....++|+|||++..... ......++..|+|||.+.+. .++.++|+||+||+++++++|.+
T Consensus 135 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~ 199 (286)
T cd07846 135 ---------------QSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEP 199 (286)
T ss_pred ---------------CCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCC
Confidence 234689999998765322 12235678899999998764 46788999999999999999999
Q ss_pred cccccCC
Q psy2006 313 LMARKTK 319 (351)
Q Consensus 313 pf~~~~~ 319 (351)
||...+.
T Consensus 200 ~~~~~~~ 206 (286)
T cd07846 200 LFPGDSD 206 (286)
T ss_pred CCCCCch
Confidence 9976654
No 311
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95 E-value=3.2e-28 Score=220.86 Aligned_cols=193 Identities=19% Similarity=0.311 Sum_probs=160.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-----------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-----------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 70 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~ 70 (351)
+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|++ |+++++++...
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~ 80 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN------IVQYLGFETTE 80 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC------cceEEEEeccC
Confidence 57999999999999998899999999986321 11235678999999999877 99999999999
Q ss_pred CeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 71 GHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 71 ~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
+..++||||+ +++|.+++.+.. .+++..++.++.|++.+ |.|||+.+++|+|++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lH~~~i~H~dl~ 135 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEG-----------------------LAYLHSKGILHRDLK 135 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHH-----------------------HHHHhhCCeeecCCC
Confidence 9999999999 999999998764 57888888888888888 999999999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
++|+.+.
T Consensus 136 ~~nil~~------------------------------------------------------------------------- 142 (272)
T cd06629 136 ADNLLVD------------------------------------------------------------------------- 142 (272)
T ss_pred hhhEEEc-------------------------------------------------------------------------
Confidence 9998876
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCC--CCCccceeeeee
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELG--WAQPCDVWSIGC 302 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~ 302 (351)
....++++|||++..... ......|+..|+|||.+.... ++.++|+||+|+
T Consensus 143 ----------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~ 200 (272)
T cd06629 143 ----------------------ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGC 200 (272)
T ss_pred ----------------------CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHH
Confidence 234688999998764321 122346788999999987654 789999999999
Q ss_pred eeEeeccccccccccCCC
Q psy2006 303 IIFELYLGITLMARKTKT 320 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~~~ 320 (351)
+++++++|..||...+..
T Consensus 201 ~l~~l~~g~~p~~~~~~~ 218 (272)
T cd06629 201 VVLEMFAGRRPWSDEEAI 218 (272)
T ss_pred HHHHHHhCCCCCcCcchH
Confidence 999999999999755443
No 312
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=3.6e-28 Score=225.63 Aligned_cols=198 Identities=19% Similarity=0.291 Sum_probs=155.5
Q ss_pred ccccCcccceEEEEEEee-------cCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYE-------VDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
++||+|+||.||+|.+.. ....||+|.+... ......+..|+++++.+ .|+| |+++++++...+
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv~~~~~~~~~~ 91 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN------IINLLGVCTQEG 91 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCC------eeeEEEEEccCC
Confidence 679999999999998642 3567999998753 22345677899999999 4776 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhh
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 136 (351)
..|+||||+ +++|.+++..... ..++...+..++.|++.+ |.
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a-----------------------L~ 148 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARG-----------------------ME 148 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHH-----------------------HH
Confidence 999999999 8999999977531 124455555555555555 99
Q ss_pred ccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhh
Q psy2006 137 YNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEAL 216 (351)
Q Consensus 137 ~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l 216 (351)
|||++|++|+|+|+.|+.+.+
T Consensus 149 ~lH~~gi~H~dlkp~Nill~~----------------------------------------------------------- 169 (314)
T cd05099 149 YLESRRCIHRDLAARNVLVTE----------------------------------------------------------- 169 (314)
T ss_pred HHHHCCeeeccccceeEEEcC-----------------------------------------------------------
Confidence 999999999999999998862
Q ss_pred cCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCC
Q psy2006 217 RHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGW 291 (351)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~ 291 (351)
...+||+|||.+...... .....++..|+|||.+.+..+
T Consensus 170 ------------------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 213 (314)
T cd05099 170 ------------------------------------DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY 213 (314)
T ss_pred ------------------------------------CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc
Confidence 346899999988643211 112234467999999988888
Q ss_pred CCccceeeeeeeeEeecc-ccccccccCCCcee
Q psy2006 292 AQPCDVWSIGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 292 ~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+.++|+|||||++|++++ |..||.+.+..+.+
T Consensus 214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 214 THQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred CccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 999999999999999998 89999877655544
No 313
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=1.5e-28 Score=230.43 Aligned_cols=191 Identities=26% Similarity=0.433 Sum_probs=159.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~ 73 (351)
++||.|+||+||+|.+..+++.||||.+... ........+|+.+++.++|+| |+++++++.... +.
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------i~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHEN------VIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCC------ccchHHheecccccccCcE
Confidence 5799999999999999999999999998642 222345678999999999877 999999887553 68
Q ss_pred EEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 74 CIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|+|+||++++|.+++.... .+++..++.++.|++.| |.|||+++++|+|+++.|+
T Consensus 85 ~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~a-----------------------L~~LH~~~i~H~dlkp~Ni 139 (337)
T cd07858 85 YIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRG-----------------------LKYIHSANVLHRDLKPSNL 139 (337)
T ss_pred EEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecCCCCHHHE
Confidence 9999999999999987654 57888888888888888 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 140 l~~----------------------------------------------------------------------------- 142 (337)
T cd07858 140 LLN----------------------------------------------------------------------------- 142 (337)
T ss_pred EEc-----------------------------------------------------------------------------
Confidence 876
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeec-CCCCCccceeeeeeeeEeecc
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~t 309 (351)
....++|+|||++...... .....++..|+|||.+.. ..++.++|+||+||++|++++
T Consensus 143 ------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 204 (337)
T cd07858 143 ------------------ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLG 204 (337)
T ss_pred ------------------CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHc
Confidence 2346899999988653322 234567889999998865 467899999999999999999
Q ss_pred ccccccccC
Q psy2006 310 GITLMARKT 318 (351)
Q Consensus 310 G~~pf~~~~ 318 (351)
|.+||.+.+
T Consensus 205 g~~pf~~~~ 213 (337)
T cd07858 205 RKPLFPGKD 213 (337)
T ss_pred CCCCCCCCC
Confidence 999997654
No 314
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=3e-28 Score=225.03 Aligned_cols=212 Identities=17% Similarity=0.243 Sum_probs=156.8
Q ss_pred ccccCcccceEEEEEEee-------cCcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYE-------VDSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
+.||+|+||.||+|.... .+..||+|++... ......+.+|+.+++.+ +|+| |+++++.+...+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------i~~~~~~~~~~~ 94 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN------IINLLGACTQDG 94 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCC------chheeEEEecCC
Confidence 679999999999997532 3458999999743 23345678899999999 6777 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
..++||||+ +++|.+++........... .. +.. .....++...+..+..|++.||.|||++|++|||+|+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~--~~----~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp 165 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYS--YD----IAR---VPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA 165 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccc--cc----ccc---CCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 999999999 8899999987532110000 00 000 0001233444445555555559999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+
T Consensus 166 ~Nili~~------------------------------------------------------------------------- 172 (304)
T cd05101 166 RNVLVTE------------------------------------------------------------------------- 172 (304)
T ss_pred ceEEEcC-------------------------------------------------------------------------
Confidence 9998862
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
...++|+|||.+..... ......+++.|+|||.+.+..++.++|+|||||++|
T Consensus 173 ----------------------~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 230 (304)
T cd05101 173 ----------------------NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 230 (304)
T ss_pred ----------------------CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence 34689999998865322 112234567899999998888999999999999999
Q ss_pred eecc-ccccccccCCCcee
Q psy2006 306 ELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 306 ~l~t-G~~pf~~~~~~~~~ 323 (351)
++++ |..||.+.+..+.+
T Consensus 231 el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 231 EIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred HHHcCCCCCcccCCHHHHH
Confidence 9998 88999887766654
No 315
>KOG0983|consensus
Probab=99.95 E-value=1.3e-28 Score=212.98 Aligned_cols=193 Identities=21% Similarity=0.283 Sum_probs=157.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
..||.|..|.||+++.+.++..+|||.+.+.. ...++++..+.++.. .|..|. ||+.+++|..+...++.||.
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~-s~dcpy----IV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLK-SHDCPY----IVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhh-ccCCCe----eeeeeeEEeeCchHHHHHHH
Confidence 46899999999999999999999999997642 223455666666654 344444 99999999999999999999
Q ss_pred cCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEeec
Q psy2006 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~Df 158 (351)
|...+..++++-. .++||..+-.+...+..| |.||-+ ++|+|||+||+||.+.
T Consensus 173 Ms~C~ekLlkrik-~piPE~ilGk~tva~v~A-----------------------L~YLKeKH~viHRDvKPSNILlD-- 226 (391)
T KOG0983|consen 173 MSTCAEKLLKRIK-GPIPERILGKMTVAIVKA-----------------------LYYLKEKHGVIHRDVKPSNILLD-- 226 (391)
T ss_pred HHHHHHHHHHHhc-CCchHHhhhhhHHHHHHH-----------------------HHHHHHhcceeecccCccceEEc--
Confidence 9888888877765 467777777766666666 999975 5899999999999887
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 227 -------------------------------------------------------------------------------- 226 (391)
T KOG0983|consen 227 -------------------------------------------------------------------------------- 226 (391)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeec---CCCCCccceeeeeeeeEeecccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
.++++|++|||.+.+. ....+..+|++.|||||.+-- ..|...+|+||||++++||+||++|
T Consensus 227 -------------e~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 227 -------------ERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred -------------cCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCC
Confidence 3678999999998763 334466899999999998863 3578899999999999999999999
Q ss_pred ccccC
Q psy2006 314 MARKT 318 (351)
Q Consensus 314 f~~~~ 318 (351)
|.+.+
T Consensus 294 y~~c~ 298 (391)
T KOG0983|consen 294 YKGCK 298 (391)
T ss_pred CCCCC
Confidence 99954
No 316
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=1.3e-28 Score=230.69 Aligned_cols=190 Identities=25% Similarity=0.475 Sum_probs=156.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~~ 74 (351)
++||+|+||.||+|++..+++.||+|++... ......+.+|+.+++.++|+| |+++++++.... +.|
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHEN------IIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCC------cCchhheeecccccccceEE
Confidence 5799999999999999999999999999642 233455678999999999877 999999876543 689
Q ss_pred EEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 75 lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
+|+||++++|.+.+... .+++..++.++.|++.| |.+||+.|++|||+|+.|+.
T Consensus 85 lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~a-----------------------L~~LH~~~ivH~dlkp~Nil 138 (336)
T cd07849 85 IVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRG-----------------------LKYIHSANVLHRDLKPSNLL 138 (336)
T ss_pred EEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHHEE
Confidence 99999988999887653 47888888888888887 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 139 l~------------------------------------------------------------------------------ 140 (336)
T cd07849 139 LN------------------------------------------------------------------------------ 140 (336)
T ss_pred EC------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeec-CCCCCccceeeeeeeeEee
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l 307 (351)
....++|+|||++..... ......|++.|+|||.+.+ ..++.++|+||+||+++++
T Consensus 141 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el 203 (336)
T cd07849 141 -----------------TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM 203 (336)
T ss_pred -----------------CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence 234689999998764321 1123467889999998765 4678999999999999999
Q ss_pred ccccccccccC
Q psy2006 308 YLGITLMARKT 318 (351)
Q Consensus 308 ~tG~~pf~~~~ 318 (351)
++|..||.+.+
T Consensus 204 ~~G~~~f~~~~ 214 (336)
T cd07849 204 LSNRPLFPGKD 214 (336)
T ss_pred HhCCCCCCCCC
Confidence 99999997654
No 317
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=2.2e-28 Score=230.23 Aligned_cols=191 Identities=24% Similarity=0.466 Sum_probs=159.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC------Ce
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH------GH 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~------~~ 72 (351)
++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.++++++|+| |+++++++... ..
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN------VIGLLDVFTPARSLEEFND 96 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCc------ccceeeeeeeccccccccc
Confidence 57999999999999998999999999997532 22355678999999999888 99999998654 35
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+++++++++|.+++... .+++..++.++.|++.| |+|||+.|++|||+++.|
T Consensus 97 ~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivH~dlkp~N 150 (345)
T cd07877 97 VYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRG-----------------------LKYIHSADIIHRDLKPSN 150 (345)
T ss_pred EEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCChHH
Confidence 8999999999999887653 46777778778877777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 151 Ill~---------------------------------------------------------------------------- 154 (345)
T cd07877 151 LAVN---------------------------------------------------------------------------- 154 (345)
T ss_pred EEEc----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.++|+|||++...........+++.|+|||.+.+ ..++.++|+||+||+++++++|.
T Consensus 155 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 155 -------------------EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred -------------------CCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence 2346899999998765544445678889999998866 46788999999999999999999
Q ss_pred ccccccCC
Q psy2006 312 TLMARKTK 319 (351)
Q Consensus 312 ~pf~~~~~ 319 (351)
.||...+.
T Consensus 216 ~pf~~~~~ 223 (345)
T cd07877 216 TLFPGTDH 223 (345)
T ss_pred CCCCCCCH
Confidence 99976543
No 318
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95 E-value=3.5e-28 Score=228.63 Aligned_cols=218 Identities=19% Similarity=0.225 Sum_probs=158.0
Q ss_pred CccccCcccceEEEEEEe-----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCC-
Q psy2006 1 MCSLNCVASNHVCTNVVY-----EVDSVVALKIIKNV--EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHG- 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~- 71 (351)
.++||.|+||+||+|.+. .+++.||||++... ......+.+|+.+|.++. |+| |+++++++...+
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------iv~~~~~~~~~~~ 85 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN------VVNLLGACTKPGG 85 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCcc------HhhhcceeecCCC
Confidence 368999999999999853 46789999999753 233456788999999995 455 999999886554
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCC-------------------CchHHHHHHHHHH-----------------------
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLP-------------------YSLDQVRHMSYQL----------------------- 108 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~-------------------~~~~~~~~~~~ql----------------------- 108 (351)
.+++||||+ +++|.+++....... +++...+......
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 789999999 999999997643110 1111000000000
Q ss_pred HHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCCh
Q psy2006 109 IYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDD 188 (351)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~ 188 (351)
..........++...+..+..|++.||.|||+++++|||+|+.|+.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~------------------------------- 214 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE------------------------------- 214 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC-------------------------------
Confidence 0000000124677778888899999999999999999999999998761
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceec
Q psy2006 189 EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD 268 (351)
Q Consensus 189 ~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~ 268 (351)
...++|+|||++....
T Consensus 215 ----------------------------------------------------------------~~~~kl~dfg~~~~~~ 230 (343)
T cd05103 215 ----------------------------------------------------------------NNVVKICDFGLARDIY 230 (343)
T ss_pred ----------------------------------------------------------------CCcEEEEecccccccc
Confidence 3468999999876422
Q ss_pred c-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-ccccccccCC
Q psy2006 269 E-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMARKTK 319 (351)
Q Consensus 269 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~~~~~ 319 (351)
. ......+++.|+|||.+.+..++.++|+|||||++|++++ |..||.....
T Consensus 231 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 287 (343)
T cd05103 231 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 287 (343)
T ss_pred cCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence 1 1122334567999999988889999999999999999996 9999976543
No 319
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=4.1e-28 Score=221.45 Aligned_cols=197 Identities=23% Similarity=0.354 Sum_probs=163.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhC---CCCCCCCcceeeeeeeEeeCCe---
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIG---EKDPNGRHLCVKMLDWFDYHGH--- 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~---h~~~~g~~~Iv~l~~~f~~~~~--- 72 (351)
+.||.|+||.||+|.++.+++.||+|.+.... .......+|+.+++++. |++ |+++++.+...+.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~------i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPN------IVRLLDVCHGPRTDRE 78 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCC------cceEEEEEeeccCCCC
Confidence 67999999999999998889999999997432 22344567888888774 555 9999999998776
Q ss_pred --EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 73 --MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 73 --~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
.+++|||++++|.+++.......+++..+..++.|++.| |.|||+.+++|+|+++
T Consensus 79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~a-----------------------l~~LH~~~i~h~~l~~ 135 (287)
T cd07838 79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRG-----------------------VDFLHSHRIVHRDLKP 135 (287)
T ss_pred ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeeccCCh
Confidence 999999998899999887654467888888888888888 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.+
T Consensus 136 ~nili~~------------------------------------------------------------------------- 142 (287)
T cd07838 136 QNILVTS------------------------------------------------------------------------- 142 (287)
T ss_pred hhEEEcc-------------------------------------------------------------------------
Confidence 9998872
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
...++|+|||.+..... ......+++.|+|||.+.+..++.++|+||+||++|+|+
T Consensus 143 ----------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~ 200 (287)
T cd07838 143 ----------------------DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF 200 (287)
T ss_pred ----------------------CCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHH
Confidence 35689999998865432 223445788899999998888999999999999999999
Q ss_pred cccccccccCCCce
Q psy2006 309 LGITLMARKTKTKY 322 (351)
Q Consensus 309 tG~~pf~~~~~~~~ 322 (351)
+|.+||.+.+..+.
T Consensus 201 ~~~~~~~~~~~~~~ 214 (287)
T cd07838 201 RRRPLFRGTSEADQ 214 (287)
T ss_pred hCCCcccCCChHHH
Confidence 99999988765543
No 320
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=4.2e-28 Score=226.74 Aligned_cols=191 Identities=25% Similarity=0.426 Sum_probs=160.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee-CCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY-HGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~-~~~~~lV~ 77 (351)
+.||.|+||.||+|.+..+++.||+|++.+. ....+.+.+|+.+++.+.|+| |++++++|.. ....|+|+
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~~~~~lv~ 89 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHEN------IISLSDIFISPLEDIYFVT 89 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCC------eeeEeeeEecCCCcEEEEe
Confidence 5799999999999999999999999998642 223456778999999999887 9999999976 45899999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||++++|.++++.. ++++..+..++.|++.+ |.|||+++++|+|+++.|+.+.+
T Consensus 90 e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~a-----------------------L~~LH~~~iiH~dl~p~Nili~~ 143 (328)
T cd07856 90 ELLGTDLHRLLTSR---PLEKQFIQYFLYQILRG-----------------------LKYVHSAGVVHRDLKPSNILINE 143 (328)
T ss_pred ehhccCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHHEeECC
Confidence 99998999887653 46777788888888887 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 144 -------------------------------------------------------------------------------- 143 (328)
T cd07856 144 -------------------------------------------------------------------------------- 143 (328)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
...++|+|||.+...........+++.|+|||.+.+ ..++.++|+||+||+++++++|..||..
T Consensus 144 ---------------~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 144 ---------------NCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred ---------------CCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 346899999998765544455677889999998866 5678999999999999999999999976
Q ss_pred cCC
Q psy2006 317 KTK 319 (351)
Q Consensus 317 ~~~ 319 (351)
.+.
T Consensus 209 ~~~ 211 (328)
T cd07856 209 KDH 211 (328)
T ss_pred CCH
Confidence 553
No 321
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=2.6e-28 Score=222.66 Aligned_cols=196 Identities=23% Similarity=0.387 Sum_probs=164.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~l 75 (351)
+++||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|+| |+++++++... +..++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~~l 77 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPN------IVRLKEIVTSKGKGSIYM 77 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCC------eeeheeeEecCCCCcEEE
Confidence 367999999999999998899999999998642 23356778999999999877 99999999988 79999
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||||++++|.+++.... ..+++..+..++.|++.| |.+||+.|++|+|+++.|+.+
T Consensus 78 v~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~a-----------------------l~~LH~~~~~h~dl~p~nil~ 133 (287)
T cd07840 78 VFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEG-----------------------LQYLHSNGILHRDIKGSNILI 133 (287)
T ss_pred EeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceeccCcHHHeEE
Confidence 99999889999987653 367888888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 134 ~~------------------------------------------------------------------------------ 135 (287)
T cd07840 134 NN------------------------------------------------------------------------------ 135 (287)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG 310 (351)
...++|+|||.+...... .....++..|+|||.+.+ ..++.++|+|||||+++++++|
T Consensus 136 -----------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~ 198 (287)
T cd07840 136 -----------------DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG 198 (287)
T ss_pred -----------------CCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhC
Confidence 356899999988654322 233456788999998876 4578999999999999999999
Q ss_pred cccccccCCCc
Q psy2006 311 ITLMARKTKTK 321 (351)
Q Consensus 311 ~~pf~~~~~~~ 321 (351)
..||...+..+
T Consensus 199 ~~p~~~~~~~~ 209 (287)
T cd07840 199 KPIFQGSTELE 209 (287)
T ss_pred CCCCCCCChHH
Confidence 99998776543
No 322
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95 E-value=5.7e-28 Score=220.22 Aligned_cols=195 Identities=17% Similarity=0.212 Sum_probs=159.4
Q ss_pred ccccCcccceEEEEEEeecCc----EEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDS----VVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++||+|+||+||+|.++.+++ .||+|++.... .....+.+|+.+++.++|+| |+++++++.. ...++
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPH------VVRLLGICLS-SQVQL 85 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCC------cceEEEEEec-CceEE
Confidence 679999999999999876654 69999987542 33456788999999998877 9999999877 79999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ +++|.+++.... ..+++..+..++.|++.| +.|||+.+++|+|+++.|+.
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~-----------------------l~~LH~~~i~H~di~p~nil 141 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKG-----------------------MSYLEEKRLVHRDLAARNVL 141 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEEecccCcceEE
Confidence 99999 899999998754 247788888888888888 99999999999999999988
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.+
T Consensus 142 ~~~----------------------------------------------------------------------------- 144 (279)
T cd05057 142 VKT----------------------------------------------------------------------------- 144 (279)
T ss_pred EcC-----------------------------------------------------------------------------
Confidence 761
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceeccccc-----cccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHS-----TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
...++|+|||.+........ ...++..|++||.+....++.++|+||+||+++++++
T Consensus 145 ------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~ 206 (279)
T cd05057 145 ------------------PQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206 (279)
T ss_pred ------------------CCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhc
Confidence 34689999998865322111 1223467999999988888999999999999999998
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..||.+.+..+.
T Consensus 207 ~g~~p~~~~~~~~~ 220 (279)
T cd05057 207 FGAKPYEGIPAVEI 220 (279)
T ss_pred CCCCCCCCCCHHHH
Confidence 9999988765543
No 323
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=4.5e-28 Score=222.00 Aligned_cols=193 Identities=20% Similarity=0.212 Sum_probs=159.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--eEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~~~lV 76 (351)
+++||.|++|.||+|.+..+++.||+|.+.... .....+.+|+++++.++|+| |++++++|.... ++|+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY------IVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCC------eeeeeeEEEccCCCeEEEE
Confidence 368999999999999998899999999997532 23456789999999999887 999999986544 79999
Q ss_pred Eecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 77 FEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|||+ +++|.+++... ....+++..+..++.|++.+ |.|+|+.+++|+|+++.|+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-----------------------L~~lH~~~i~H~dl~~~ni 136 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG-----------------------LSYLHSRKIIHRDIKPSNI 136 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHE
Confidence 9999 88999887643 22356777777777777777 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 137 l~~~---------------------------------------------------------------------------- 140 (287)
T cd06621 137 LLTR---------------------------------------------------------------------------- 140 (287)
T ss_pred EEec----------------------------------------------------------------------------
Confidence 8761
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceecc-ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
...++|+|||++..... ......++..|++||.+.+..++.++|+||+||++|++++|..
T Consensus 141 -------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 201 (287)
T cd06621 141 -------------------KGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRF 201 (287)
T ss_pred -------------------CCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 34589999998764322 2234456788999999988889999999999999999999999
Q ss_pred ccccc
Q psy2006 313 LMARK 317 (351)
Q Consensus 313 pf~~~ 317 (351)
||...
T Consensus 202 p~~~~ 206 (287)
T cd06621 202 PFPPE 206 (287)
T ss_pred CCCcc
Confidence 99866
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=8.4e-28 Score=223.16 Aligned_cols=194 Identities=20% Similarity=0.236 Sum_probs=162.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|++..+++.||+|++... ......+.+|+.+++.++|++ ++++++++......|+||
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN------TIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCC------CccEEEEEEeCCEEEEEE
Confidence 5799999999999999889999999999642 223356778999999999887 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||+.+++.+++.... .++++..+..++.|++.+ +.|||+.|++|+|+++.|+.+.
T Consensus 101 e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~a-----------------------l~~LH~~gi~H~dl~p~nili~- 155 (313)
T cd06633 101 EYCLGSASDLLEVHK-KPLQEVEIAAITHGALQG-----------------------LAYLHSHNMIHRDIKAGNILLT- 155 (313)
T ss_pred ecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCChhhEEEC-
Confidence 999889999887654 357777777777877777 9999999999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 156 -------------------------------------------------------------------------------- 155 (313)
T cd06633 156 -------------------------------------------------------------------------------- 155 (313)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeee---cCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
..+.++|+|||++.... ......|+..|+|||.+. ...++.++|+||+||++|++++|..||
T Consensus 156 --------------~~~~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~ 220 (313)
T cd06633 156 --------------EPGQVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 220 (313)
T ss_pred --------------CCCCEEEeecCCCcccC-CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 13468999999875432 234567888999999985 345788999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+...
T Consensus 221 ~~~~~~~ 227 (313)
T cd06633 221 FNMNAMS 227 (313)
T ss_pred CCCChHH
Confidence 8766444
No 325
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=1.5e-28 Score=229.44 Aligned_cols=194 Identities=26% Similarity=0.423 Sum_probs=165.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-----eE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-----HM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-----~~ 73 (351)
++||.|+||.||+|++..+++.||+|++... ....+.+.+|+.+++.+.|++ |+++++++...+ ++
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHEN------IIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcc------hhhhhhhhcccCcccccce
Confidence 6799999999999999888999999999753 233456788999999999877 999999998875 89
Q ss_pred EEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 74 CIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 74 ~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|+||||++++|.+++.+.. .+++..+..++.|++.+ |.+||++|++|+|+++.|+
T Consensus 80 ~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~-----------------------l~~LH~~gi~H~dlkp~ni 134 (330)
T cd07834 80 YIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRG-----------------------LKYLHSANVIHRDLKPSNI 134 (330)
T ss_pred EEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHE
Confidence 9999999889999987654 67788888888888887 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 135 li~----------------------------------------------------------------------------- 137 (330)
T cd07834 135 LVN----------------------------------------------------------------------------- 137 (330)
T ss_pred EEc-----------------------------------------------------------------------------
Confidence 886
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeecC-CCCCccceeeeeeeeEe
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||.+...... .....+++.|+|||.+.+. .++.++|+||+||++++
T Consensus 138 ------------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~ 199 (330)
T cd07834 138 ------------------SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAE 199 (330)
T ss_pred ------------------CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHH
Confidence 2356899999988763322 3345678899999999887 78999999999999999
Q ss_pred eccccccccccCCCc
Q psy2006 307 LYLGITLMARKTKTK 321 (351)
Q Consensus 307 l~tG~~pf~~~~~~~ 321 (351)
+++|.+||.+.+..+
T Consensus 200 l~~g~~pf~~~~~~~ 214 (330)
T cd07834 200 LLTRKPLFPGRDYID 214 (330)
T ss_pred HHcCCCCcCCCCHHH
Confidence 999999998877544
No 326
>KOG0695|consensus
Probab=99.95 E-value=2.4e-29 Score=223.09 Aligned_cols=191 Identities=17% Similarity=0.296 Sum_probs=162.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++.||+|+|+.|-+++.+++.+.||+|++++. ....+-+..|-.+..+.+ .+.++|.|...|.....+++|
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhcccceEEEE
Confidence 46799999999999999999999999999864 233455677777777654 233499999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
.||+ ||+|.=.|++.+ . ++++.+++|..+++.||.|||++||+.||+|..|+.|
T Consensus 330 ieyv~ggdlmfhmqrqr--k-----------------------lpeeharfys~ei~lal~flh~rgiiyrdlkldnvll 384 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQR--K-----------------------LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL 384 (593)
T ss_pred EEEecCcceeeehhhhh--c-----------------------CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE
Confidence 9999 999987777765 3 5556666666666666999999999999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 385 d------------------------------------------------------------------------------- 385 (593)
T KOG0695|consen 385 D------------------------------------------------------------------------------- 385 (593)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcce---eccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
..+.+||+|+|+|+- .....++.+|||.|.|||++.+..|+..+|+|+||++++||..|+.
T Consensus 386 ----------------aeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrs 449 (593)
T KOG0695|consen 386 ----------------AEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS 449 (593)
T ss_pred ----------------cCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCC
Confidence 467899999999975 3445578999999999999999999999999999999999999999
Q ss_pred cccc
Q psy2006 313 LMAR 316 (351)
Q Consensus 313 pf~~ 316 (351)
||+-
T Consensus 450 pfdi 453 (593)
T KOG0695|consen 450 PFDI 453 (593)
T ss_pred Ccce
Confidence 9964
No 327
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95 E-value=9.1e-29 Score=223.46 Aligned_cols=198 Identities=23% Similarity=0.279 Sum_probs=161.6
Q ss_pred ccccCcccceEEEEEEe----ecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVY----EVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.||.|+||.||+|... ..+..|+||+++.. ....+.+.+|++++++++|+| |+++++++...+..++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPN------IVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTT------BE-EEEEEESSSSEEE
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccc------cccccccccccccccc
Confidence 57999999999999987 35789999999643 233577889999999999888 9999999998888999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|+||+ +++|.+++.......++......++.|++.| |.|||+++++|+++++.|+.
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~-----------------------l~~Lh~~~iiH~~l~~~nil 135 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEA-----------------------LSYLHSNNIIHGNLSPSNIL 135 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHH-----------------------HHHHHHTTEEEST-SGGGEE
T ss_pred ccccccccccccccccccccccccccccccccccccc-----------------------cccccccccccccccccccc
Confidence 99999 7899999999844567888888888888888 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 136 l~------------------------------------------------------------------------------ 137 (259)
T PF07714_consen 136 LD------------------------------------------------------------------------------ 137 (259)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 77
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
....+||+|||++..... ......+...|+|||.+.+..++.++||||||+++||+++
T Consensus 138 -----------------~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~ 200 (259)
T PF07714_consen 138 -----------------SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILT 200 (259)
T ss_dssp -----------------TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHT
T ss_pred -----------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 245799999998865421 1223445678999999988889999999999999999999
Q ss_pred -ccccccccCCCcee
Q psy2006 310 -GITLMARKTKTKYF 323 (351)
Q Consensus 310 -G~~pf~~~~~~~~~ 323 (351)
|..||...+..++.
T Consensus 201 ~~~~p~~~~~~~~~~ 215 (259)
T PF07714_consen 201 LGKFPFSDYDNEEII 215 (259)
T ss_dssp TSSGTTTTSCHHHHH
T ss_pred ccccccccccccccc
Confidence 78999887666543
No 328
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=2.1e-28 Score=220.37 Aligned_cols=204 Identities=25% Similarity=0.404 Sum_probs=167.9
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||.|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++|+| |+++++.+......|+|+||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPY------VVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcc------hhHHHHheecCcEEEEEEec
Confidence 799999999999998889999999997542 34456788999999999877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.+.. .+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.
T Consensus 75 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~-----------------------L~~lH~~~i~H~di~~~nil~~-- 127 (265)
T cd05579 75 LPGGDLASLLENVG--SLDEDVARIYIAEIVLA-----------------------LEYLHSNGIIHRDLKPDNILID-- 127 (265)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHcCeecCCCCHHHeEEc--
Confidence 9 889999998765 57888888888888888 9999999999999999998775
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (265)
T cd05579 128 -------------------------------------------------------------------------------- 127 (265)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc-----------ccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
....++|+|||++..... ......+++.|++||.......+.++|+||||++++++
T Consensus 128 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l 194 (265)
T cd05579 128 -------------SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEF 194 (265)
T ss_pred -------------CCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHH
Confidence 234678888887654211 12335677889999999888889999999999999999
Q ss_pred ccccccccccCCCceee---ecccCCccc
Q psy2006 308 YLGITLMARKTKTKYFY---HGKLDWDEK 333 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~~---~~~~~~~~~ 333 (351)
++|..||...+..+.+. .+.+.|...
T Consensus 195 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
T cd05579 195 LVGIPPFHGETPEEIFQNILNGKIEWPED 223 (265)
T ss_pred HhCCCCCCCCCHHHHHHHHhcCCcCCCcc
Confidence 99999998877665543 234444443
No 329
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95 E-value=3.7e-28 Score=223.52 Aligned_cols=198 Identities=16% Similarity=0.192 Sum_probs=154.0
Q ss_pred ccccCcccceEEEEEEee----------------cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeee
Q psy2006 2 CSLNCVASNHVCTNVVYE----------------VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKM 63 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l 63 (351)
++||+|+||+||++.+.. ++..||+|++... ....+.+.+|+++|+.++|++ |+++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~ 84 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN------IIRL 84 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------cceE
Confidence 679999999999986432 3557999999753 233456789999999999877 9999
Q ss_pred eeeEeeCCeEEEEEecc-CCCHHHHHHhcCCC---------CCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHh
Q psy2006 64 LDWFDYHGHMCIAFEIL-GLSVFDFLKENNYL---------PYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIY 133 (351)
Q Consensus 64 ~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~---------~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (351)
++++...+..|+||||+ +++|.+++...... .+++..+..++.|++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------- 141 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIAS----------------------- 141 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHH-----------------------
Confidence 99999999999999999 89999999875321 1333444555555554
Q ss_pred hhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChh
Q psy2006 134 AVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLS 213 (351)
Q Consensus 134 ~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~ 213 (351)
|++|||+.|++|+|+|+.|+.+.+
T Consensus 142 al~~lH~~~i~H~dlkp~Nili~~-------------------------------------------------------- 165 (296)
T cd05095 142 GMKYLSSLNFVHRDLATRNCLVGK-------------------------------------------------------- 165 (296)
T ss_pred HHHHHHHCCeecccCChheEEEcC--------------------------------------------------------
Confidence 499999999999999999998862
Q ss_pred hhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeec
Q psy2006 214 EALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILE 288 (351)
Q Consensus 214 e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~ 288 (351)
...++|+|||++...... .....+++.|++||...+
T Consensus 166 ---------------------------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 206 (296)
T cd05095 166 ---------------------------------------NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL 206 (296)
T ss_pred ---------------------------------------CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc
Confidence 346899999987642211 112334567999998888
Q ss_pred CCCCCccceeeeeeeeEeecc--ccccccccCCCcee
Q psy2006 289 LGWAQPCDVWSIGCIIFELYL--GITLMARKTKTKYF 323 (351)
Q Consensus 289 ~~~~~~~DiwslG~~l~~l~t--G~~pf~~~~~~~~~ 323 (351)
..++.++|+|||||++|++++ |..||...+..+..
T Consensus 207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05095 207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI 243 (296)
T ss_pred CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 889999999999999999998 88999877655543
No 330
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=4e-28 Score=222.58 Aligned_cols=218 Identities=17% Similarity=0.210 Sum_probs=156.9
Q ss_pred ccccCcccceEEEEEEee-----cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||+|+||+||+|.+.. ..+.+|+|.+.... ...+.+.+|+++++.+.|+| |+++++.+...+..+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~ 79 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPH------VIKLYGACSQDGPLL 79 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCC------EeeEEEEEecCCCcE
Confidence 679999999999999753 33679999987532 23456788999999999887 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchH--HHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLD--QVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~--~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+|+||+ +++|.+++........... .... .... ...+..-++++..+..+..|++.||.|||+.+++|||+++.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNR-NSSY--LDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCcccccccccccc-cccc--ccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence 999999 8999999875421000000 0000 0000 00000113444444555555555599999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.|
T Consensus 157 nill~~-------------------------------------------------------------------------- 162 (290)
T cd05045 157 NVLVAE-------------------------------------------------------------------------- 162 (290)
T ss_pred eEEEcC--------------------------------------------------------------------------
Confidence 998862
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
...++|+|||++...... .....++..|+|||.+.+..++.++|+|||||++++
T Consensus 163 ---------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 163 ---------------------GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred ---------------------CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence 346899999988642111 122344568999999888888999999999999999
Q ss_pred ecc-ccccccccCCCcee
Q psy2006 307 LYL-GITLMARKTKTKYF 323 (351)
Q Consensus 307 l~t-G~~pf~~~~~~~~~ 323 (351)
|++ |..||.+.+..+++
T Consensus 222 l~t~g~~p~~~~~~~~~~ 239 (290)
T cd05045 222 IVTLGGNPYPGIAPERLF 239 (290)
T ss_pred HHhcCCCCCCCCCHHHHH
Confidence 998 99999887766543
No 331
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.95 E-value=7.3e-28 Score=217.15 Aligned_cols=191 Identities=21% Similarity=0.278 Sum_probs=161.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh---hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||.|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++.++|++ |+++++.+...+..++|+|
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~------i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN------LVKYYGVEVHREKVYIFME 79 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCC------hhheeeeEecCCEEEEEEe
Confidence 689999999999999988999999999976432 4567889999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.... .+++..+..++.|++.+ +.|||+.|++|+|+++.|+.+.+
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~-----------------------l~~lh~~~i~H~dl~~~nil~~~ 134 (264)
T cd06626 80 YCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEG-----------------------LAYLHSHGIVHRDIKPANIFLDH 134 (264)
T ss_pred cCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHHEEECC
Confidence 99 899999987753 46777788888888877 99999999999999999998862
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (264)
T cd06626 135 -------------------------------------------------------------------------------- 134 (264)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc-------cccccccceeeCceeeecCC---CCCccceeeeeeeeEee
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-------HSTIVSTRHYRAPEVILELG---WAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~~l~~l 307 (351)
...++|+|||.+...... .....+++.|++||.+.+.. .+.++|+||+|++++++
T Consensus 135 ---------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l 199 (264)
T cd06626 135 ---------------NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199 (264)
T ss_pred ---------------CCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHH
Confidence 356899999987653221 11346778999999998765 78999999999999999
Q ss_pred ccccccccccC
Q psy2006 308 YLGITLMARKT 318 (351)
Q Consensus 308 ~tG~~pf~~~~ 318 (351)
++|..||....
T Consensus 200 ~~g~~pf~~~~ 210 (264)
T cd06626 200 ATGKRPWSELD 210 (264)
T ss_pred HhCCCCccCCc
Confidence 99999997653
No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.95 E-value=1.2e-27 Score=222.56 Aligned_cols=194 Identities=21% Similarity=0.248 Sum_probs=161.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||+|+||.||+|++..+++.||+|++... ......+..|+++++.+.|+| ++++++++..+...++||
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN------SIEYKGCYLREHTAWLVM 104 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCC------EEEEEEEEeeCCeEEEEE
Confidence 5799999999999999889999999999643 123346778999999999887 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||+.++|.+.+.... .++++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.+
T Consensus 105 e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~-----------------------l~~lH~~~i~H~dL~p~Nil~~~ 160 (317)
T cd06635 105 EYCLGSASDLLEVHK-KPLQEVEIAAITHGALQG-----------------------LAYLHSHNMIHRDIKAGNILLTE 160 (317)
T ss_pred eCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCcccEEECC
Confidence 999889988886654 357777777778877777 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 161 -------------------------------------------------------------------------------- 160 (317)
T cd06635 161 -------------------------------------------------------------------------------- 160 (317)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeee---cCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||++.... ......|++.|+|||.+. ...++.++|+||+||+++++++|..||
T Consensus 161 ---------------~~~~kl~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~ 224 (317)
T cd06635 161 ---------------PGQVKLADFGSASIAS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 224 (317)
T ss_pred ---------------CCCEEEecCCCccccC-CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 3468999999876433 233456888999999874 345788999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+..+
T Consensus 225 ~~~~~~~ 231 (317)
T cd06635 225 FNMNAMS 231 (317)
T ss_pred CCccHHH
Confidence 8765444
No 333
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=2.4e-28 Score=228.79 Aligned_cols=192 Identities=21% Similarity=0.394 Sum_probs=159.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC----CeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH----GHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~----~~~~ 74 (351)
+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+|+.++|+| |++++++|... .++|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDN------IIAIRDILRPPGADFKDVY 84 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCC------ccCHHHhccccCCCCceEE
Confidence 57999999999999999999999999997532 23456678999999999877 99999998743 4799
Q ss_pred EEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 75 lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
+||||++++|.+++.... .+++..++.++.|++.| |.|||+.+++|||+|+.|+.
T Consensus 85 lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~a-----------------------L~~LH~~~ivH~dlkp~Nil 139 (334)
T cd07855 85 VVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRG-----------------------LKYIHSANVIHRDLKPSNLL 139 (334)
T ss_pred EEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEE
Confidence 999999889999987654 47888888888888887 99999999999999999997
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 140 ~~------------------------------------------------------------------------------ 141 (334)
T cd07855 140 VN------------------------------------------------------------------------------ 141 (334)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeec-CCCCCccceeeeeeeeEe
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~ 306 (351)
..+.+||+|||++..... ......|+..|+|||.+.+ ..++.++|+||+||++|+
T Consensus 142 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~e 204 (334)
T cd07855 142 -----------------EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAE 204 (334)
T ss_pred -----------------CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHH
Confidence 235689999998864321 1123467889999998865 457899999999999999
Q ss_pred eccccccccccCC
Q psy2006 307 LYLGITLMARKTK 319 (351)
Q Consensus 307 l~tG~~pf~~~~~ 319 (351)
+++|..||.+.+.
T Consensus 205 l~~g~~pf~~~~~ 217 (334)
T cd07855 205 MLGRRQLFPGKNY 217 (334)
T ss_pred HHcCCCccCCCCh
Confidence 9999999977653
No 334
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=6.2e-28 Score=220.11 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=164.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh--hhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK--YREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
.++||.|+||+||+|++..+++.||+|.+..... ......+|+..++.+. |++ |+++++++..+++.++||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~------i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPN------IVKLKEVFRENDELYFVF 77 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCC------chhHHHHhhcCCcEEEEE
Confidence 3689999999999999988899999999875422 2223456899999987 777 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||++++|.+.+.......+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.+
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~Lh~~~i~H~dl~~~ni~i~~ 134 (283)
T cd07830 78 EYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQG-----------------------LAHIHKHGFFHRDLKPENLLVSG 134 (283)
T ss_pred ecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCChhhEEEcC
Confidence 9999999999987654467888888888888888 99999999999999999998872
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (283)
T cd07830 135 -------------------------------------------------------------------------------- 134 (283)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeec-CCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||.+..... ......++..|+|||.+.+ ..++.++|+||||++++++++|.+||
T Consensus 135 ---------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~ 199 (283)
T cd07830 135 ---------------PEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLF 199 (283)
T ss_pred ---------------CCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCcc
Confidence 35689999998865432 2234567889999998865 45689999999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
...+..+.
T Consensus 200 ~~~~~~~~ 207 (283)
T cd07830 200 PGSSEIDQ 207 (283)
T ss_pred CCCChHHH
Confidence 87765443
No 335
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=8.2e-28 Score=218.08 Aligned_cols=198 Identities=14% Similarity=0.150 Sum_probs=153.2
Q ss_pred ccccCcccceEEEEEEeec--CcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV--DSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~--~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++||+|+||+||+|..... ...+++|.+... ....+.+.+|+.+++.++|+| |+++++.+....+.|+||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~------iv~~~~~~~~~~~~~lv~ 74 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPN------ILQCLGQCVEAIPYLLVF 74 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcc------hhheEEEecCCCccEEEE
Confidence 4799999999999986433 345667776543 234567889999999999888 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCC--CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 78 EIL-GLSVFDFLKENNY--LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~--~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||+ +++|.+++.+... ...++..++.++.|++.| |+|||+++++|+|+|+.|+.
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~a-----------------------l~~lH~~~i~H~dikp~nil 131 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAG-----------------------VTHMHKHNFLHSDLALRNCF 131 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCccceEE
Confidence 999 8999999986531 235566667777777777 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 132 ~~------------------------------------------------------------------------------ 133 (268)
T cd05086 132 LT------------------------------------------------------------------------------ 133 (268)
T ss_pred Ec------------------------------------------------------------------------------
Confidence 76
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeec-------CCCCCccceeeeee
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILE-------LGWAQPCDVWSIGC 302 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~ 302 (351)
....++|+|||++..... ......+++.|+|||++.. ..++.++|+|||||
T Consensus 134 -----------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~ 196 (268)
T cd05086 134 -----------------SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGV 196 (268)
T ss_pred -----------------CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHH
Confidence 134689999998753211 1223567889999998753 23577899999999
Q ss_pred eeEeecc-ccccccccCCCcee
Q psy2006 303 IIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 303 ~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
++|++++ |..||...+..+.+
T Consensus 197 ~l~el~~~~~~p~~~~~~~~~~ 218 (268)
T cd05086 197 TLWELFENAAQPYSHLSDREVL 218 (268)
T ss_pred HHHHHHhCCCCCCCCCCHHHHH
Confidence 9999986 67788776655443
No 336
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=3.8e-28 Score=218.13 Aligned_cols=199 Identities=20% Similarity=0.265 Sum_probs=166.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+++++.++|+| |+++++.+...++.++|+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~------i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN------IVTFFASFQENGRLFIVME 79 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCC------hhhhhheeccCCeEEEEEe
Confidence 57999999999999999999999999997531 23456778999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ +++|.+++.+.....+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.+
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~H~dl~~~nil~~~ 136 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG-----------------------LKHIHDRKILHRDIKSQNIFLSK 136 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccccCCHHHEEEcC
Confidence 99 8899999987655567888888888888888 99999999999999999998862
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 137 -------------------------------------------------------------------------------- 136 (257)
T cd08225 137 -------------------------------------------------------------------------------- 136 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++++|||.+...... .....|++.|+|||.+.+..++.++|+||+|++++++++|..||
T Consensus 137 --------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~ 202 (257)
T cd08225 137 --------------NGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPF 202 (257)
T ss_pred --------------CCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 1134689999987653221 12346788999999998888899999999999999999999999
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
...+..+..
T Consensus 203 ~~~~~~~~~ 211 (257)
T cd08225 203 EGNNLHQLV 211 (257)
T ss_pred CCccHHHHH
Confidence 876544443
No 337
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=1.3e-27 Score=218.62 Aligned_cols=194 Identities=21% Similarity=0.288 Sum_probs=164.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||.|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.+.|+| |+++++.|...+..|+|+||+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPN------IVDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCC------eeEEEEEEEECCEEEEEEeccC
Confidence 5699999999999999888999999999865444567788999999999877 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.... ..++...+..++.|++.+ |.+||+.|++|+|+++.|+.+.
T Consensus 99 ~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~-----------------------L~~lH~~gi~H~dl~p~ni~i~---- 150 (286)
T cd06614 99 GGSLTDIITQNF-VRMNEPQIAYVCREVLQG-----------------------LEYLHSQNVIHRDIKSDNILLS---- 150 (286)
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeeCCCChhhEEEc----
Confidence 799999998865 357777788888888877 9999999999999999999876
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 151 -------------------------------------------------------------------------------- 150 (286)
T cd06614 151 -------------------------------------------------------------------------------- 150 (286)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
..+.++|+|||.+..... ......+++.|++||.+.+..++.++|+|||||++|++++|..||...
T Consensus 151 -----------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~ 219 (286)
T cd06614 151 -----------KDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE 219 (286)
T ss_pred -----------CCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 234689999998754222 123345778999999998888899999999999999999999999876
Q ss_pred CCC
Q psy2006 318 TKT 320 (351)
Q Consensus 318 ~~~ 320 (351)
+..
T Consensus 220 ~~~ 222 (286)
T cd06614 220 PPL 222 (286)
T ss_pred CHH
Confidence 543
No 338
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=9e-28 Score=224.91 Aligned_cols=198 Identities=17% Similarity=0.274 Sum_probs=154.7
Q ss_pred ccccCcccceEEEEEEeec-------CcEEEEEEecch--hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYEV-------DSVVALKIIKNV--EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-------~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
++||+|+||.||+|.+... +..||+|++... ....+.+.+|+++++++ .|+| |+++++++...+
T Consensus 18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv~~~~~~~~~~ 91 (334)
T cd05100 18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN------IINLLGACTQDG 91 (334)
T ss_pred ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCC------eeeeeEEEccCC
Confidence 5799999999999986532 237999998753 23345678899999999 6777 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcCC--------------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhh
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNY--------------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~--------------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 136 (351)
.+++||||+ +++|.+++..... ..++...+..++.|++.| |.
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a-----------------------l~ 148 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARG-----------------------ME 148 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHH-----------------------HH
Confidence 999999999 8899999986431 123344445555555555 99
Q ss_pred ccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhh
Q psy2006 137 YNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEAL 216 (351)
Q Consensus 137 ~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l 216 (351)
|||++|++|||+|+.|+.+.+
T Consensus 149 ~LH~~givH~dlkp~Nill~~----------------------------------------------------------- 169 (334)
T cd05100 149 YLASQKCIHRDLAARNVLVTE----------------------------------------------------------- 169 (334)
T ss_pred HHHHCCeeccccccceEEEcC-----------------------------------------------------------
Confidence 999999999999999998862
Q ss_pred cCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCC
Q psy2006 217 RHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGW 291 (351)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~ 291 (351)
...++|+|||.+...... .....++..|+|||.+.+..+
T Consensus 170 ------------------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 213 (334)
T cd05100 170 ------------------------------------DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVY 213 (334)
T ss_pred ------------------------------------CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCc
Confidence 346899999988643221 122334567999999988889
Q ss_pred CCccceeeeeeeeEeecc-ccccccccCCCcee
Q psy2006 292 AQPCDVWSIGCIIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 292 ~~~~DiwslG~~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
+.++|+|||||++|+|++ |..||.+.+..+.+
T Consensus 214 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 214 THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred CchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999999998 89999877655554
No 339
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.95 E-value=1.2e-27 Score=215.70 Aligned_cols=191 Identities=22% Similarity=0.302 Sum_probs=164.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|++ |+++++.+...+..++||||
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY------VVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC------eeeEEEEEccCCeEEEEEEe
Confidence 67999999999999999999999999997643 34567889999999999777 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEee
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLID 157 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~D 157 (351)
+ +++|.+++.... .+++..+..++.|++.+ +.|+|+ .+++|+|++++|+.+.
T Consensus 81 ~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~-----------------------l~~lh~~~~~~H~~l~~~ni~~~- 134 (264)
T cd06623 81 MDGGSLADLLKKVG--KIPEPVLAYIARQILKG-----------------------LDYLHTKRHIIHRDIKPSNLLIN- 134 (264)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHhccCCCccCCCCHHHEEEC-
Confidence 9 799999998763 57788888888888887 999999 9999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 135 -------------------------------------------------------------------------------- 134 (264)
T cd06623 135 -------------------------------------------------------------------------------- 134 (264)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecccc---ccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||.+....... ....++..|+|||.+....++.++|+||||+++|++++|..||
T Consensus 135 --------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~ 200 (264)
T cd06623 135 --------------SKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF 200 (264)
T ss_pred --------------CCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 23568999999886533222 2456788999999998888899999999999999999999999
Q ss_pred cccC
Q psy2006 315 ARKT 318 (351)
Q Consensus 315 ~~~~ 318 (351)
....
T Consensus 201 ~~~~ 204 (264)
T cd06623 201 LPPG 204 (264)
T ss_pred cccc
Confidence 7775
No 340
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.95 E-value=1e-27 Score=218.94 Aligned_cols=192 Identities=19% Similarity=0.211 Sum_probs=154.0
Q ss_pred CccccCcccceEEEEE----EeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeE
Q psy2006 1 MCSLNCVASNHVCTNV----VYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~ 73 (351)
++.||+|+||+||+|. +..+++.||+|.+... ....+.+.+|+++++.+.|+| |+++++++... ..+
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDN------IVKYKGVCYSAGRRNL 82 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCC------eeEEEEEEccCCCCce
Confidence 3679999999999997 3457899999999753 233456789999999999888 99999987543 379
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
|+||||+ +++|.+++.... ..+++..+..++.|++.| |.|||++|++|+|+|+.|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~a-----------------------L~~LH~~~i~H~dlkp~n 138 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKG-----------------------MEYLGSKRYVHRDLATRN 138 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceeccCCHhh
Confidence 9999999 899999997654 247777788888888877 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 139 ili~---------------------------------------------------------------------------- 142 (284)
T cd05081 139 ILVE---------------------------------------------------------------------------- 142 (284)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecCCCCCccceeeeeeeeEe
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 306 (351)
....++|+|||++....... ....++..|+|||.+.+..++.++|+||+||++++
T Consensus 143 -------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 203 (284)
T cd05081 143 -------------------SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 203 (284)
T ss_pred -------------------CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHH
Confidence 13468999999886532211 11223456999999988888999999999999999
Q ss_pred ecccccccccc
Q psy2006 307 LYLGITLMARK 317 (351)
Q Consensus 307 l~tG~~pf~~~ 317 (351)
+++|..++...
T Consensus 204 l~~~~~~~~~~ 214 (284)
T cd05081 204 LFTYSDKSCSP 214 (284)
T ss_pred HhhcCCcCCCc
Confidence 99988776443
No 341
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.95 E-value=1.9e-27 Score=216.69 Aligned_cols=193 Identities=20% Similarity=0.227 Sum_probs=158.0
Q ss_pred CccccCcccceEEEEEEe----ecCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee--CCe
Q psy2006 1 MCSLNCVASNHVCTNVVY----EVDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY--HGH 72 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~--~~~ 72 (351)
++.||.|+||+||+|+.. .+++.||+|++..... ..+.+.+|+++++.+.|+| |+++++++.. ..+
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~------i~~~~~~~~~~~~~~ 82 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN------IVKYKGVCEKPGGRS 82 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCC------hheEEeeeecCCCCc
Confidence 367999999999999854 3588999999986543 3567889999999999887 9999999887 458
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.++||||+ +++|.+++..... .+++..+..++.|++.+ |.|||+.|++|+|+++.
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~a-----------------------L~~lH~~~i~H~dl~p~ 138 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKG-----------------------MDYLGSQRYIHRDLAAR 138 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHH
Confidence 99999999 8899999987642 47777777777777777 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 139 nil~~--------------------------------------------------------------------------- 143 (284)
T cd05038 139 NILVE--------------------------------------------------------------------------- 143 (284)
T ss_pred hEEEc---------------------------------------------------------------------------
Confidence 99876
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecccc------ccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH------STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
....++|+|||.+....... ....++..|++||.+.+..++.++|+|||||+++
T Consensus 144 --------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~ 203 (284)
T cd05038 144 --------------------SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY 203 (284)
T ss_pred --------------------CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhh
Confidence 13568999999886543211 1123345689999998888899999999999999
Q ss_pred eeccccccccccC
Q psy2006 306 ELYLGITLMARKT 318 (351)
Q Consensus 306 ~l~tG~~pf~~~~ 318 (351)
++++|..||....
T Consensus 204 el~tg~~p~~~~~ 216 (284)
T cd05038 204 ELFTYGDPSQSPP 216 (284)
T ss_pred eeeccCCCccccc
Confidence 9999999987644
No 342
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=3.3e-28 Score=228.68 Aligned_cols=192 Identities=24% Similarity=0.401 Sum_probs=157.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC----------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH---------- 70 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~---------- 70 (351)
++||.|+||+||+|.+..+++.||+|++.... ...+.+.+|+++++.++|+| |+++++.+...
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~------i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDN------IVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCc------chhhHhhhccccccccccccc
Confidence 67999999999999999999999999996543 33456788999999999887 99999877654
Q ss_pred ----CeEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccc
Q psy2006 71 ----GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVR 146 (351)
Q Consensus 71 ----~~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~ 146 (351)
.+.|+||||++++|.+++... .+++..++.++.|++.| |+|||+.|++||
T Consensus 85 ~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~a-----------------------L~~LH~~givH~ 138 (342)
T cd07854 85 LTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRG-----------------------LKYIHSANVLHR 138 (342)
T ss_pred ccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccC
Confidence 368999999988999888653 47888888888888888 999999999999
Q ss_pred ccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 147 RVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 147 d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
|+|++|+.+..
T Consensus 139 dikp~Nili~~--------------------------------------------------------------------- 149 (342)
T cd07854 139 DLKPANVFINT--------------------------------------------------------------------- 149 (342)
T ss_pred CCCHHHEEEcC---------------------------------------------------------------------
Confidence 99999988751
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc------cccccccceeeCceeeec-CCCCCccceee
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH------HSTIVSTRHYRAPEVILE-LGWAQPCDVWS 299 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 299 (351)
....++++|||.+...... .....++..|+|||.+.+ ..++.++|+||
T Consensus 150 -------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwS 204 (342)
T cd07854 150 -------------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 204 (342)
T ss_pred -------------------------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHH
Confidence 1245789999987643211 122356788999998755 56788999999
Q ss_pred eeeeeEeeccccccccccCC
Q psy2006 300 IGCIIFELYLGITLMARKTK 319 (351)
Q Consensus 300 lG~~l~~l~tG~~pf~~~~~ 319 (351)
|||++|++++|..||...+.
T Consensus 205 lGvil~el~~g~~pf~~~~~ 224 (342)
T cd07854 205 AGCIFAEMLTGKPLFAGAHE 224 (342)
T ss_pred HHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999976543
No 343
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=5.3e-28 Score=221.47 Aligned_cols=219 Identities=17% Similarity=0.217 Sum_probs=159.0
Q ss_pred CccccCcccceEEEEEEee-----cCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 1 MCSLNCVASNHVCTNVVYE-----VDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
+++||.|+||.||+|.+.. +++.||+|++.... .....+.+|+.+++.+.|++ |+++++++....+.
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~------iv~~~~~~~~~~~~ 83 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPN------IVKLLGVCAVGKPM 83 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCc------hheEEEEEcCCCcc
Confidence 3679999999999999753 67899999997532 23456788999999999887 99999999999999
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
|+||||+ +++|.+++...... ..........+.. ....+...+++..+..++.|++.||.|+|+++++|+|+++.|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPR--AQCSLSHSTSSAR-KCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCcc--ccccccccccccc-cccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 9999999 88999999764310 0000000000000 000111234455555556666666999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 161 il~~~--------------------------------------------------------------------------- 165 (288)
T cd05050 161 CLVGE--------------------------------------------------------------------------- 165 (288)
T ss_pred eEecC---------------------------------------------------------------------------
Confidence 98752
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
...++|+|||.+...... .....++..|+|||.+.+..++.++|+|||||++|+|
T Consensus 166 --------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 225 (288)
T cd05050 166 --------------------NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225 (288)
T ss_pred --------------------CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHH
Confidence 346889999987642211 1223345679999999888899999999999999999
Q ss_pred cc-ccccccccCCCcee
Q psy2006 308 YL-GITLMARKTKTKYF 323 (351)
Q Consensus 308 ~t-G~~pf~~~~~~~~~ 323 (351)
++ |..||.+.+..+..
T Consensus 226 ~~~~~~p~~~~~~~~~~ 242 (288)
T cd05050 226 FSYGMQPYYGMAHEEVI 242 (288)
T ss_pred HhCCCCCCCCCCHHHHH
Confidence 97 88899776655543
No 344
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95 E-value=6.6e-28 Score=221.75 Aligned_cols=192 Identities=19% Similarity=0.304 Sum_probs=161.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
.+||+|+||.||++.+..+++.||+|++... ......+.+|+.+++.++|+| |+++++.|..+++.|+||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN------VVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcc------hhheeeEEEeCCEEEEEEecC
Confidence 3699999999999999899999999998642 233456788999999999877 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++... .+++..+..++.|++.+ +.|||+.|++|+|+++.|+.+.
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~-----------------------l~~lH~~givH~dl~p~Nilv~--- 150 (292)
T cd06657 100 EGGALTDIVTHT---RMNEEQIAAVCLAVLKA-----------------------LSVLHAQGVIHRDIKSDSILLT--- 150 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEEC---
Confidence 88999877543 46788888888888887 9999999999999999999876
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 151 -------------------------------------------------------------------------------- 150 (292)
T cd06657 151 -------------------------------------------------------------------------------- 150 (292)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMAR 316 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~ 316 (351)
....++|+|||++..... ......|++.|++||.+.+..++.++|+||+|+++|++++|..||.+
T Consensus 151 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~ 218 (292)
T cd06657 151 ------------HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 218 (292)
T ss_pred ------------CCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 124589999998754322 12335678899999998888889999999999999999999999987
Q ss_pred cCCC
Q psy2006 317 KTKT 320 (351)
Q Consensus 317 ~~~~ 320 (351)
.+..
T Consensus 219 ~~~~ 222 (292)
T cd06657 219 EPPL 222 (292)
T ss_pred CCHH
Confidence 6544
No 345
>KOG1095|consensus
Probab=99.95 E-value=3.3e-28 Score=246.59 Aligned_cols=204 Identities=20% Similarity=0.271 Sum_probs=164.2
Q ss_pred ccccCcccceEEEEEEeec-C----cEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-D----SVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-~----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.||.|+||.||.|.-... + -.||+|.+... ......+.+|..+|+.+.|+| |++++++.-..+-.+
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpN------iv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPN------IVSLIGVCLDSGPPL 771 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcc------eeeEEEeecCCCCcE
Confidence 5699999999999986542 2 34999999764 455667899999999999988 999999999999999
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
|++||| ||||..+|+..+...+.. .-++-.++..+..+++.|..||++++++|||+..-|+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~------------------~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNC 833 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQP------------------SNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNC 833 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCC------------------CCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhhe
Confidence 999999 999999999884332221 1233444444555555559999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
+|.
T Consensus 834 LL~----------------------------------------------------------------------------- 836 (1025)
T KOG1095|consen 834 LLD----------------------------------------------------------------------------- 836 (1025)
T ss_pred eec-----------------------------------------------------------------------------
Confidence 887
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcce-ecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATF-DDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~-~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
.+..|||+|||+++- ....- ....-...|||||.+....|+.++||||||+++||++
T Consensus 837 ------------------~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif 898 (1025)
T KOG1095|consen 837 ------------------ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF 898 (1025)
T ss_pred ------------------ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence 346799999999983 22111 1222346899999999999999999999999999999
Q ss_pred c-ccccccccCCCceee
Q psy2006 309 L-GITLMARKTKTKYFY 324 (351)
Q Consensus 309 t-G~~pf~~~~~~~~~~ 324 (351)
| |..||...+..+++.
T Consensus 899 slG~~PY~~~~n~~v~~ 915 (1025)
T KOG1095|consen 899 SLGATPYPSRSNFEVLL 915 (1025)
T ss_pred hCCCCCCCCcchHHHHH
Confidence 7 999999999998864
No 346
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=1.2e-27 Score=216.95 Aligned_cols=196 Identities=20% Similarity=0.256 Sum_probs=158.7
Q ss_pred ccccCcccceEEEEEEeec---CcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV---DSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
++||.|+||.||+|.+... ...||+|.+... ....+.+.+|+.+++.+.|+| |+++++++.. ...++|
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPH------IVKLIGVITE-NPVWIV 84 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCc------hhceeEEEcC-CCcEEE
Confidence 5799999999999997543 457999998753 234567888999999999877 9999998875 567899
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||+ +++|.+++.... ..+++..+..++.|++.+ |+|+|+.+++|+|+++.|+.+
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~~~H~dl~p~nili 140 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTA-----------------------LAYLESKRFVHRDIAARNVLV 140 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccccChheEEE
Confidence 9999 899999997754 257788888888888887 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 141 ~------------------------------------------------------------------------------- 141 (270)
T cd05056 141 S------------------------------------------------------------------------------- 141 (270)
T ss_pred e-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecCCCCCccceeeeeeeeEeecc-c
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL-G 310 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G 310 (351)
....++++|||++...... .....+++.|+|||.+....++.++|+|||||+++++++ |
T Consensus 142 ----------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 142 ----------------SPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred ----------------cCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcC
Confidence 1346899999987653221 112234467999999988888999999999999999885 9
Q ss_pred cccccccCCCcee
Q psy2006 311 ITLMARKTKTKYF 323 (351)
Q Consensus 311 ~~pf~~~~~~~~~ 323 (351)
..||.+.+..+..
T Consensus 206 ~~pf~~~~~~~~~ 218 (270)
T cd05056 206 VKPFQGVKNNDVI 218 (270)
T ss_pred CCCCCCCCHHHHH
Confidence 9999887765544
No 347
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=5.8e-28 Score=227.02 Aligned_cols=190 Identities=26% Similarity=0.482 Sum_probs=157.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------e
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------H 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------~ 72 (351)
+.||.|+||.||+|++..+++.||+|++... ......+.+|+++++.+.|+| |++++++|.... +
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHEN------VIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCC------ccchhheecccccCCCCce
Confidence 5799999999999999889999999999753 222345778999999999888 999999997653 5
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.|+|+||+..+|.+++. ..+++..+..++.|++.| |.|||+.+++|||++++|
T Consensus 95 ~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~a-----------------------L~~LH~~~i~H~dlkp~N 147 (342)
T cd07879 95 FYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCG-----------------------LKYIHSAGIIHRDLKPGN 147 (342)
T ss_pred EEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCCHHH
Confidence 79999999878877652 246777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.
T Consensus 148 Ill~---------------------------------------------------------------------------- 151 (342)
T cd07879 148 LAVN---------------------------------------------------------------------------- 151 (342)
T ss_pred EEEC----------------------------------------------------------------------------
Confidence 9876
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
..+.++|+|||++...........+++.|+|||.+.+ ..++.++|+||+||+++++++|.
T Consensus 152 -------------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~ 212 (342)
T cd07879 152 -------------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212 (342)
T ss_pred -------------------CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCC
Confidence 2356899999998765444445677889999999876 45788999999999999999999
Q ss_pred ccccccCC
Q psy2006 312 TLMARKTK 319 (351)
Q Consensus 312 ~pf~~~~~ 319 (351)
.||.+.+.
T Consensus 213 ~pf~~~~~ 220 (342)
T cd07879 213 TLFKGKDY 220 (342)
T ss_pred CCCCCCCH
Confidence 99987653
No 348
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=1.7e-27 Score=220.64 Aligned_cols=194 Identities=21% Similarity=0.201 Sum_probs=160.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.||.|+||.||+|+++.+++.+|+|.+... ......+.+|+++++.++|++ ++++++++......++||
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN------TIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCC------cccEEEEEEcCCeeEEEE
Confidence 5799999999999999989999999998632 223345678999999998877 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||+.+++.+.+.... ..+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+.+
T Consensus 95 e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~-----------------------l~~LH~~~i~H~dl~p~nil~~~ 150 (308)
T cd06634 95 EYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQG-----------------------LAYLHSHNMIHRDVKAGNILLSE 150 (308)
T ss_pred EccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHHhEEECC
Confidence 999889988876554 357777788888888877 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 151 -------------------------------------------------------------------------------- 150 (308)
T cd06634 151 -------------------------------------------------------------------------------- 150 (308)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec---CCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||++..... .....+++.|+|||.+.+ ..++.++|+|||||++|++++|..||
T Consensus 151 ---------------~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 214 (308)
T cd06634 151 ---------------PGLVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214 (308)
T ss_pred ---------------CCcEEECCcccceeecC-cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCC
Confidence 34689999998765332 234567889999998753 45688999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+..+
T Consensus 215 ~~~~~~~ 221 (308)
T cd06634 215 FNMNAMS 221 (308)
T ss_pred ccccHHH
Confidence 7765443
No 349
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=1.7e-27 Score=214.45 Aligned_cols=197 Identities=19% Similarity=0.258 Sum_probs=163.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~l 75 (351)
++.||.|+||.||+|.+..+++.||+|++... ....+.+..|+++++.++|+| |+++++.+... ...++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPN------IVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCc------cceeeeeeecCCCCEEEE
Confidence 35799999999999999999999999999643 234456778999999999887 99999988643 47899
Q ss_pred EEecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccc-----cccccccc
Q psy2006 76 AFEIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN-----KKKREVRR 147 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH-----~~~i~h~d 147 (351)
+|||+ +++|.+++.... ...+++..+..++.|++.+ |.++| +.+++|+|
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~-----------------------l~~lH~~~~~~~~i~h~d 135 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA-----------------------LYECHNRSDPGNTVLHRD 135 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHH-----------------------HHHHhcCccccCcceecC
Confidence 99999 889999997642 2356777777777777777 99999 89999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
++++|+.+.+
T Consensus 136 l~p~nili~~---------------------------------------------------------------------- 145 (265)
T cd08217 136 LKPANIFLDA---------------------------------------------------------------------- 145 (265)
T ss_pred CCHHHEEEec----------------------------------------------------------------------
Confidence 9999998872
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecCCCCCccceeeeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCII 304 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 304 (351)
...++|+|||++...... .....+++.|+|||.+.+..++.++|+||||+++
T Consensus 146 -------------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il 200 (265)
T cd08217 146 -------------------------NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLI 200 (265)
T ss_pred -------------------------CCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHH
Confidence 356899999988753322 2345688999999999888889999999999999
Q ss_pred EeeccccccccccCCCc
Q psy2006 305 FELYLGITLMARKTKTK 321 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~ 321 (351)
+++++|..||...+..+
T Consensus 201 ~~l~~g~~p~~~~~~~~ 217 (265)
T cd08217 201 YELCALSPPFTARNQLQ 217 (265)
T ss_pred HHHHHCCCcccCcCHHH
Confidence 99999999998776433
No 350
>KOG0669|consensus
Probab=99.95 E-value=4.3e-30 Score=219.80 Aligned_cols=198 Identities=21% Similarity=0.349 Sum_probs=163.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC---C----
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH---G---- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~---~---- 71 (351)
.+||+|.||.||+|+.+.+++.||+|++... ........+|+++|+.|.|.| |+.+++.+... .
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHen------v~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHEN------VVNLIEICRTKATPTNRDR 96 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchh------HHHHHHHHhhccCCccccc
Confidence 4799999999999999999999999998642 345567899999999999888 66666655422 2
Q ss_pred -eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 -HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 -~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
.+++||.+|..+|..++.... .+++...++.++.+++.| |.|+|+..++|||+|+
T Consensus 97 ~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~G-----------------------L~~iHr~kilHRDmKa 152 (376)
T KOG0669|consen 97 ATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNG-----------------------LYYIHRNKILHRDMKA 152 (376)
T ss_pred ceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHH-----------------------HHHHHHhhHHhhcccH
Confidence 699999999999999987654 467777777777777777 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
.|+.+.
T Consensus 153 aNvLIt-------------------------------------------------------------------------- 158 (376)
T KOG0669|consen 153 ANVLIT-------------------------------------------------------------------------- 158 (376)
T ss_pred hhEEEc--------------------------------------------------------------------------
Confidence 999876
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeec-CCCCCccceeeeee
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGC 302 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 302 (351)
..+.+||+|||+++.... .-+..+-|.+|++||.++| +.++++.|+|..||
T Consensus 159 ---------------------~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgC 217 (376)
T KOG0669|consen 159 ---------------------KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGC 217 (376)
T ss_pred ---------------------CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHH
Confidence 246789999999854221 1122445899999999997 57899999999999
Q ss_pred eeEeeccccccccccCCCceee
Q psy2006 303 IIFELYLGITLMARKTKTKYFY 324 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~~~~~~~ 324 (351)
++.+|.||.+.|.+.+....+.
T Consensus 218 imaeMwtrspimqgnteqqql~ 239 (376)
T KOG0669|consen 218 IMAEMWTRSPIMQGNTEQQQLH 239 (376)
T ss_pred HHHHHHccCccccCChHHHHHH
Confidence 9999999999999999888763
No 351
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=9.7e-28 Score=213.81 Aligned_cols=181 Identities=18% Similarity=0.197 Sum_probs=149.0
Q ss_pred cccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-CCCHH
Q psy2006 7 VASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-GLSVF 85 (351)
Q Consensus 7 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~ 85 (351)
|.||.||++++..+++.||+|.+.... ...+|...+....|+| |+++++++....+.|+||||+ +++|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPN------MVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCc------eeehhhheecCCeEEEEEecCCCCCHH
Confidence 899999999999999999999998642 2233444444444455 999999999999999999999 89999
Q ss_pred HHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCC
Q psy2006 86 DFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDD 165 (351)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~ 165 (351)
+++.+.. .+++..+..++.|++.+ |+|||++|++|||+|+.|+.+.
T Consensus 74 ~~l~~~~--~l~~~~~~~~~~ql~~~-----------------------l~~lH~~~i~H~dlkp~Nil~~--------- 119 (237)
T cd05576 74 SHISKFL--NIPEECVKRWAAEMVVA-----------------------LDALHREGIVCRDLNPNNILLD--------- 119 (237)
T ss_pred HHHHHhc--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHHEEEc---------
Confidence 9987754 47888888888888888 9999999999999999999876
Q ss_pred CCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchh
Q psy2006 166 EHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSS 245 (351)
Q Consensus 166 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
T Consensus 120 -------------------------------------------------------------------------------- 119 (237)
T cd05576 120 -------------------------------------------------------------------------------- 119 (237)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 246 LVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 246 ~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
..+.++++|||.+...........++..|+|||.+.+.+++.++|+||+||+++++++|..||...
T Consensus 120 ------~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~ 185 (237)
T cd05576 120 ------DRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH 185 (237)
T ss_pred ------CCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcC
Confidence 234688999997655433333445567899999998888899999999999999999999988654
No 352
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=2.8e-28 Score=229.25 Aligned_cols=193 Identities=24% Similarity=0.484 Sum_probs=162.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCe------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH------ 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~------ 72 (351)
++||.|+||+||+|.+..+++.||+|++... ....+.+.+|+.+++.+.|+| |+++++++...+.
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHEN------VIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCC------HHHHHHHhhcccccccccc
Confidence 5799999999999999889999999998642 223355678999999998877 9999998876654
Q ss_pred EEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 73 MCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 73 ~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
.++|+||++++|.+++... .+++..+..++.|++.+ |.|||+.|++|+|+++.|
T Consensus 95 ~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~a-----------------------L~~LH~~gi~H~dlkp~N 148 (343)
T cd07851 95 VYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRG-----------------------LKYIHSAGIIHRDLKPSN 148 (343)
T ss_pred EEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHH
Confidence 9999999999999998763 47888888888888888 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 149 ill~~--------------------------------------------------------------------------- 153 (343)
T cd07851 149 IAVNE--------------------------------------------------------------------------- 153 (343)
T ss_pred eEECC---------------------------------------------------------------------------
Confidence 98862
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeec-CCCCCccceeeeeeeeEeecccc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
...++|+|||.+...........+++.|+|||.+.+ ..++.++|+||+||++|++++|.
T Consensus 154 --------------------~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~ 213 (343)
T cd07851 154 --------------------DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213 (343)
T ss_pred --------------------CCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCC
Confidence 346899999998765544555678889999998865 36688999999999999999999
Q ss_pred ccccccCCCc
Q psy2006 312 TLMARKTKTK 321 (351)
Q Consensus 312 ~pf~~~~~~~ 321 (351)
.||.+.+..+
T Consensus 214 ~pf~~~~~~~ 223 (343)
T cd07851 214 TLFPGSDHID 223 (343)
T ss_pred CCCCCCChHH
Confidence 9998765443
No 353
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=2.1e-27 Score=217.68 Aligned_cols=190 Identities=22% Similarity=0.298 Sum_probs=156.7
Q ss_pred ccccCcccceEEEEEEe---ecCcEEEEEEecchh-----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCe
Q psy2006 2 CSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE-----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGH 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~ 72 (351)
+.||.|+||.||+|.+. .+++.||+|++.... ...+...+|+++++.+. |++ |+.+++.|+.++.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~------i~~~~~~~~~~~~ 79 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF------LVTLHYAFQTDTK 79 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCC------hhceeeEeecCCe
Confidence 67999999999999975 378999999997532 23356778999999995 555 9999999999999
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.|+||||+ +++|.+++.... ++++..+..++.|++.+ |.|||+.|++|||+++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~a-----------------------l~~lH~~~i~H~dl~p~ 134 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLA-----------------------LEHLHKLGIIYRDIKLE 134 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHH
Confidence 99999999 899999998764 57788888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 135 nil~~--------------------------------------------------------------------------- 139 (290)
T cd05613 135 NILLD--------------------------------------------------------------------------- 139 (290)
T ss_pred HeEEC---------------------------------------------------------------------------
Confidence 99876
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecc----ccccccccceeeCceeeecC--CCCCccceeeeeeeeE
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----HHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCIIF 305 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~ 305 (351)
..+.++|+|||++..... ......|+..|+|||.+.+. .++.++|+||+|+++|
T Consensus 140 --------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 140 --------------------SNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred --------------------CCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHH
Confidence 134689999998765322 12245678899999998753 4578899999999999
Q ss_pred eecccccccccc
Q psy2006 306 ELYLGITLMARK 317 (351)
Q Consensus 306 ~l~tG~~pf~~~ 317 (351)
++++|..||...
T Consensus 200 ~ll~g~~p~~~~ 211 (290)
T cd05613 200 ELLTGASPFTVD 211 (290)
T ss_pred HHhcCCCCCCcC
Confidence 999999999743
No 354
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.94 E-value=3.2e-27 Score=210.63 Aligned_cols=193 Identities=25% Similarity=0.306 Sum_probs=165.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh-hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK-YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+.||.|++|.||++.+..+++.|++|++..... ....+.+|+.+++.+.|++ |+++++.|..+...++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPN------IVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCC------EeEEEEEEecCCeEEEEEecC
Confidence 679999999999999988999999999976432 4567889999999999777 999999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
+++|.+++.... ..+++..+..++.|++.+ +.+||+.|++|+|+++.|+.+.+
T Consensus 80 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~-----------------------l~~lh~~~i~h~dl~p~ni~i~~-- 133 (253)
T cd05122 80 SGGSLKDLLKSTN-QTLTESQIAYVCKELLKG-----------------------LEYLHSNGIIHRDIKAANILLTS-- 133 (253)
T ss_pred CCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHhhcCCEecCCCCHHHEEEcc--
Confidence 699999987763 357777777888877777 99999999999999999998862
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (253)
T cd05122 134 -------------------------------------------------------------------------------- 133 (253)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceeccc--cccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEH--HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
.+.++|+|||.+...... .....++..|++||.+.+...+.++|+||+|++++++++|..||...
T Consensus 134 -------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 134 -------------DGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -------------CCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 356899999988764433 24567788999999998888899999999999999999999999876
Q ss_pred CC
Q psy2006 318 TK 319 (351)
Q Consensus 318 ~~ 319 (351)
+.
T Consensus 201 ~~ 202 (253)
T cd05122 201 PP 202 (253)
T ss_pred ch
Confidence 43
No 355
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94 E-value=1.8e-27 Score=223.14 Aligned_cols=192 Identities=28% Similarity=0.408 Sum_probs=155.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHh-CCCCCCCCcceeeeeeeEeeCC--eEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKI-GEKDPNGRHLCVKMLDWFDYHG--HMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l-~h~~~~g~~~Iv~l~~~f~~~~--~~~l 75 (351)
+.||.|+||.||+|.+..+++.||+|.+... ........+|+.+++++ +|+| |++++++|...+ ..|+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------i~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPN------IVKLLNVIKAENDKDIYL 86 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCC------ccceeeeeccCCCceEEE
Confidence 5799999999999999889999999988542 22334567899999999 8877 999999987543 7899
Q ss_pred EEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 76 AFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 76 V~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||||++++|.+++... .+++..++.++.|++.+ |.|||+.|++|+|+++.|+.+
T Consensus 87 v~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~-----------------------L~~LH~~~i~H~dl~p~nill 140 (337)
T cd07852 87 VFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKA-----------------------LKYIHSGNVIHRDLKPSNILL 140 (337)
T ss_pred EecccccCHHHHHhcC---CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCHHHEEE
Confidence 9999988999988764 46677777777777777 999999999999999999887
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 141 ~------------------------------------------------------------------------------- 141 (337)
T cd07852 141 N------------------------------------------------------------------------------- 141 (337)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc--------ccccccccceeeCceeeec-CCCCCccceeeeeeeeEe
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--------HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFE 306 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~~ 306 (351)
..+.++|+|||.+..... ......|++.|+|||.+.+ ..++.++|+||+||++|+
T Consensus 142 ----------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~e 205 (337)
T cd07852 142 ----------------SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE 205 (337)
T ss_pred ----------------CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHH
Confidence 234688999998754221 1223567889999998876 456889999999999999
Q ss_pred eccccccccccCCC
Q psy2006 307 LYLGITLMARKTKT 320 (351)
Q Consensus 307 l~tG~~pf~~~~~~ 320 (351)
+++|..||.+.+..
T Consensus 206 l~tg~~pf~~~~~~ 219 (337)
T cd07852 206 MLLGKPLFPGTSTL 219 (337)
T ss_pred HHhCCCCCCCCChH
Confidence 99999999765543
No 356
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=1.1e-27 Score=220.45 Aligned_cols=192 Identities=11% Similarity=0.020 Sum_probs=144.9
Q ss_pred ccccCcccceEEEEEEeec---CcEEEEEEecchhhh--h----------HHHHHHHHHHHHhCCCCCCCCcceeeeeee
Q psy2006 2 CSLNCVASNHVCTNVVYEV---DSVVALKIIKNVEKY--R----------EAARLEINALQKIGEKDPNGRHLCVKMLDW 66 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~--~----------~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~ 66 (351)
++||+|+||+||+|.+..+ ++.+|+|+....... . .....+...+..+.|.+ |+.+++.
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~------i~~~~~~ 91 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG------IPKYYGC 91 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC------CCcEEEe
Confidence 5799999999999998777 778888875432110 0 01112223333444444 9999887
Q ss_pred EeeCC----eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc
Q psy2006 67 FDYHG----HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK 142 (351)
Q Consensus 67 f~~~~----~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~ 142 (351)
..... ..++++|++..++.+.+.... ..++..++.++.|++.| |+|||+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~-----------------------l~~lH~~~ 146 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTT-----------------------LEYIHEHG 146 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHH-----------------------HHHHHhCC
Confidence 65543 568899999888888876643 35777788888888888 99999999
Q ss_pred ccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCC
Q psy2006 143 REVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222 (351)
Q Consensus 143 i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~ 222 (351)
++|||+||.|+.+.
T Consensus 147 iiHrDiKp~Nill~------------------------------------------------------------------ 160 (294)
T PHA02882 147 ISHGDIKPENIMVD------------------------------------------------------------------ 160 (294)
T ss_pred eecCCCCHHHEEEc------------------------------------------------------------------
Confidence 99999999999875
Q ss_pred CCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceec----------cccccccccceeeCceeeecCCCC
Q psy2006 223 KLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD----------EHHSTIVSTRHYRAPEVILELGWA 292 (351)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~ 292 (351)
....++|+|||++.... .......||+.|+|||+..+..++
T Consensus 161 -----------------------------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~ 211 (294)
T PHA02882 161 -----------------------------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVT 211 (294)
T ss_pred -----------------------------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCC
Confidence 13457899999876421 111234689999999999988999
Q ss_pred CccceeeeeeeeEeeccccccccccCC
Q psy2006 293 QPCDVWSIGCIIFELYLGITLMARKTK 319 (351)
Q Consensus 293 ~~~DiwslG~~l~~l~tG~~pf~~~~~ 319 (351)
.++|+||+||+++++++|..||.+.+.
T Consensus 212 ~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 212 RRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999999999999988743
No 357
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.94 E-value=2e-27 Score=212.57 Aligned_cols=192 Identities=24% Similarity=0.351 Sum_probs=164.1
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchh----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVE----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
||.|+||.||++.+..+++.||+|++.... .....+..|+.+++.++|++ |+++++.++.++..|+||||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPF------IVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCc------HHHHHHHeecCCeeEEEEec
Confidence 799999999999998889999999997643 23457788999999999877 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++.... .+++..+..++.|++.+ +.++|+.+++|+|+++.|+.+.
T Consensus 75 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~-----------------------l~~lh~~~~~H~~l~p~ni~~~-- 127 (250)
T cd05123 75 APGGELFSHLSKEG--RFSEERARFYAAEIVLA-----------------------LEYLHSLGIIYRDLKPENILLD-- 127 (250)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCceecCCCcceEEEc--
Confidence 9 999999998764 47788888888888887 9999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (250)
T cd05123 128 -------------------------------------------------------------------------------- 127 (250)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
....++|+|||++..... ......++..|++||.+.+...+.++|+||||++++++++|..||.
T Consensus 128 -------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 194 (250)
T cd05123 128 -------------ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFY 194 (250)
T ss_pred -------------CCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 234689999998866432 2344567889999999988888899999999999999999999997
Q ss_pred ccCCCc
Q psy2006 316 RKTKTK 321 (351)
Q Consensus 316 ~~~~~~ 321 (351)
..+..+
T Consensus 195 ~~~~~~ 200 (250)
T cd05123 195 AEDRKE 200 (250)
T ss_pred CCCHHH
Confidence 766433
No 358
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.94 E-value=2.7e-27 Score=213.43 Aligned_cols=193 Identities=15% Similarity=0.185 Sum_probs=150.7
Q ss_pred ccccCcccceEEEEEEee---cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEe-eCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE---VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD-YHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~-~~~~~~l 75 (351)
+.||+|+||+||+|.+.. .+..||+|.+... ....+.+.+|+.+++.++|+| |+++++++. .++..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPN------VLSLLGICLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCC------cceEEEEeecCCCCcEE
Confidence 579999999999999754 3468999998542 233456778999999999888 999999765 4557899
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||||+ +++|.+++.... ...+...+..++.|++.| |.|||+.+++|||+++.|+.
T Consensus 75 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dlk~~nil 130 (262)
T cd05058 75 VLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKG-----------------------MEYLASKKFVHRDLAARNCM 130 (262)
T ss_pred EEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCccccccCcceEE
Confidence 99999 899999997654 234555566666677776 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.+
T Consensus 131 i~~----------------------------------------------------------------------------- 133 (262)
T cd05058 131 LDE----------------------------------------------------------------------------- 133 (262)
T ss_pred EcC-----------------------------------------------------------------------------
Confidence 762
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
...++|+|||++..... ......+++.|+|||.+.+..++.++|+|||||++|++
T Consensus 134 ------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 195 (262)
T cd05058 134 ------------------SFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 195 (262)
T ss_pred ------------------CCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence 34589999998764211 11233456789999999888899999999999999999
Q ss_pred cc-ccccccccCC
Q psy2006 308 YL-GITLMARKTK 319 (351)
Q Consensus 308 ~t-G~~pf~~~~~ 319 (351)
++ |.+||...+.
T Consensus 196 ~~~~~~~~~~~~~ 208 (262)
T cd05058 196 MTRGAPPYPDVDS 208 (262)
T ss_pred HcCCCCCCCCCCH
Confidence 99 5667765443
No 359
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=1.3e-27 Score=220.84 Aligned_cols=194 Identities=16% Similarity=0.180 Sum_probs=155.8
Q ss_pred CccccCcccceEEEEEEeecCc----EEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDS----VVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
++.||+|+||.||+|.+..+++ .||+|++.... .....+.+|+.+++.+.|+| |+++++++.. ...+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~n------iv~~~~~~~~-~~~~ 84 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPH------LVRLLGVCLS-PTIQ 84 (303)
T ss_pred ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC------cccEEEEEcC-CCce
Confidence 3679999999999999877776 57889886532 22335778999999999888 9999998865 4577
Q ss_pred EEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe
Q psy2006 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI 153 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni 153 (351)
+|+||+ +++|.+++.... ..+++..+..++.|++.| |.|||+++++|+|+|+.|+
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~-----------------------L~~LH~~~ivH~dikp~Ni 140 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKG-----------------------MMYLEERRLVHRDLAARNV 140 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHH-----------------------HHHHhhcCeecccccccee
Confidence 999999 899999987754 256777888888888887 9999999999999999999
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.+
T Consensus 141 ll~~---------------------------------------------------------------------------- 144 (303)
T cd05110 141 LVKS---------------------------------------------------------------------------- 144 (303)
T ss_pred eecC----------------------------------------------------------------------------
Confidence 8762
Q ss_pred chhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEeec
Q psy2006 234 TQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 308 (351)
...+||+|||.+...... .....++..|+|||.+.+..++.++|+|||||++|+++
T Consensus 145 -------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~ 205 (303)
T cd05110 145 -------------------PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205 (303)
T ss_pred -------------------CCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 245899999988653211 11233467899999998888999999999999999998
Q ss_pred c-ccccccccCCC
Q psy2006 309 L-GITLMARKTKT 320 (351)
Q Consensus 309 t-G~~pf~~~~~~ 320 (351)
+ |..||.+....
T Consensus 206 t~g~~p~~~~~~~ 218 (303)
T cd05110 206 TFGGKPYDGIPTR 218 (303)
T ss_pred hCCCCCCCCCCHH
Confidence 7 99999776433
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94 E-value=6.1e-28 Score=219.36 Aligned_cols=210 Identities=18% Similarity=0.275 Sum_probs=156.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++++. |+| |+++++.|...+..++|
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~------i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPG------IIKLYYTFQDEENLYFV 80 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCC------chhHHHHhcCCceEEEE
Confidence 5799999999999999999999999999753 223356788999999998 766 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||++ +++|.+++.... .+++..+..++.|++.+ |.+||+.|++|+|+++.|+.+
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~-----------------------l~~Lh~~~~~H~dl~~~ni~i 135 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLA-----------------------LEYLHSKGIIHRDLKPENILL 135 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCCCHHHeEE
Confidence 9999 999999998764 57888888888888887 999999999999999877654
Q ss_pred --------eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 156 --------IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 156 --------~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+|||++...............
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~--------------------------------------------------- 164 (280)
T cd05581 136 DKDMHIKITDFGTAKVLDPNSSPESNKGD--------------------------------------------------- 164 (280)
T ss_pred CCCCCEEecCCccccccCCccccccCCCC---------------------------------------------------
Confidence 444444321111100000000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 307 (351)
-..++..............++..|++||.+.....+.++|+||+||+++++
T Consensus 165 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l 215 (280)
T cd05581 165 -----------------------------ATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQM 215 (280)
T ss_pred -----------------------------CccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHH
Confidence 000000000011122344677899999998888889999999999999999
Q ss_pred ccccccccccCCCce
Q psy2006 308 YLGITLMARKTKTKY 322 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~ 322 (351)
++|..||...+....
T Consensus 216 ~~g~~p~~~~~~~~~ 230 (280)
T cd05581 216 LTGKPPFRGSNEYLT 230 (280)
T ss_pred HhCCCCCCCccHHHH
Confidence 999999987765443
No 361
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=2.6e-27 Score=219.57 Aligned_cols=192 Identities=17% Similarity=0.139 Sum_probs=155.3
Q ss_pred cccCc--ccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 3 SLNCV--ASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 3 ~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+||+| ++|.||.+++..+++.||+|++... ....+.+.+|+.+++.++|+| |++++++|...+..+++|
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~------i~~~~~~~~~~~~~~~~~ 78 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPN------ILPYVTSFIVDSELYVVS 78 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcc------hhhhhheeecCCeEEEEE
Confidence 45554 6677777777789999999999753 234467889999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
||+ +++|.+++.......+++..++.++.|++.| |+|||+++++|+|+++.|+.+.
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~-----------------------L~~LH~~~ivH~dlk~~Nili~ 135 (314)
T cd08216 79 PLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNA-----------------------LDYIHSKGFIHRSVKASHILLS 135 (314)
T ss_pred eccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeecCCCCcceEEEe
Confidence 999 8999999987654567888888888888887 9999999999999999999886
Q ss_pred ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchh
Q psy2006 157 DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236 (351)
Q Consensus 157 Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~ 236 (351)
+
T Consensus 136 ~------------------------------------------------------------------------------- 136 (314)
T cd08216 136 G------------------------------------------------------------------------------- 136 (314)
T ss_pred c-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccchhhhhhhccccceeeeccCCcceecc----------ccccccccceeeCceeeec--CCCCCccceeeeeeee
Q psy2006 237 DRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE----------HHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGCII 304 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l 304 (351)
.+.++++||+.+..... ......++..|+|||.+.+ ..++.++|+||+||++
T Consensus 137 ----------------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il 200 (314)
T cd08216 137 ----------------DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITA 200 (314)
T ss_pred ----------------CCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHH
Confidence 24577777776643211 1123446678999999876 3578899999999999
Q ss_pred EeeccccccccccC
Q psy2006 305 FELYLGITLMARKT 318 (351)
Q Consensus 305 ~~l~tG~~pf~~~~ 318 (351)
+++++|..||....
T Consensus 201 ~el~~g~~pf~~~~ 214 (314)
T cd08216 201 CELANGHVPFKDMP 214 (314)
T ss_pred HHHHhCCCCCCCCC
Confidence 99999999998654
No 362
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.94 E-value=5e-27 Score=210.19 Aligned_cols=194 Identities=23% Similarity=0.315 Sum_probs=165.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++||.|++|.||+|.+..+++.||+|.+.... ...+.+.+|+++++++.|++ |+++++++...+..++|||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN------IVKYIGSIETSDSLYIILE 79 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCC------ccEEEEEEEeCCEEEEEEe
Confidence 57999999999999998899999999997643 34567889999999998877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
++ +++|.+++.... .+++..+..++.|++.+ +.++|+.|++|+|+++.|+.+.
T Consensus 80 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~H~dl~p~ni~i~- 133 (254)
T cd06627 80 YAENGSLRQIIKKFG--PFPESLVAVYVYQVLQG-----------------------LAYLHEQGVIHRDIKAANILTT- 133 (254)
T ss_pred cCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHH-----------------------HHHHhhCCcccCCCCHHHEEEC-
Confidence 99 889999988763 57888888888888887 9999999999999999999886
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (254)
T cd06627 134 -------------------------------------------------------------------------------- 133 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecccc---ccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH---STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....++|+|||.+....... ....++..|+|||...+...+.++|+|++|++++++++|..||
T Consensus 134 --------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~ 199 (254)
T cd06627 134 --------------KDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY 199 (254)
T ss_pred --------------CCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 13468999999887643222 3456788999999988877889999999999999999999999
Q ss_pred cccCCCc
Q psy2006 315 ARKTKTK 321 (351)
Q Consensus 315 ~~~~~~~ 321 (351)
...+...
T Consensus 200 ~~~~~~~ 206 (254)
T cd06627 200 YDLNPMA 206 (254)
T ss_pred CCccHHH
Confidence 7665433
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=1.5e-27 Score=217.09 Aligned_cols=194 Identities=25% Similarity=0.369 Sum_probs=164.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|.||.||+|++..+++.||+|++... ....+....|+.+++.+.|++ |+++++++...+..++|||
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPN------IVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCC------HHHHHhhhhcCCceEEEec
Confidence 5799999999999999889999999999864 233456678999999998777 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
|++++|.+++.... ..+++..+..++.|++.+ |.+||+.|++|+|+++.|+.+.+
T Consensus 79 ~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~~l~~~ni~~~~- 133 (282)
T cd07829 79 YCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRG-----------------------LAYCHSHRILHRDLKPQNILINR- 133 (282)
T ss_pred CcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCcccCCCChheEEEcC-
Confidence 99889999998864 357888888888888888 99999999999999999998872
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (282)
T cd07829 134 -------------------------------------------------------------------------------- 133 (282)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
...++|+|||.+...... .....++..|+|||.+.+. .++.++|+||+||+++++++|.+||
T Consensus 134 --------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~ 199 (282)
T cd07829 134 --------------DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLF 199 (282)
T ss_pred --------------CCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCC
Confidence 356899999988653322 2234456789999998776 7789999999999999999999999
Q ss_pred cccCCC
Q psy2006 315 ARKTKT 320 (351)
Q Consensus 315 ~~~~~~ 320 (351)
.+.+..
T Consensus 200 ~~~~~~ 205 (282)
T cd07829 200 PGDSEI 205 (282)
T ss_pred CCccHH
Confidence 877643
No 364
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=4.1e-27 Score=213.22 Aligned_cols=193 Identities=19% Similarity=0.302 Sum_probs=156.6
Q ss_pred ccccCcccceEEEEEEee-cCcEEEEEEecch-----------hhhhHHHHHHHHHHHH-hCCCCCCCCcceeeeeeeEe
Q psy2006 2 CSLNCVASNHVCTNVVYE-VDSVVALKIIKNV-----------EKYREAARLEINALQK-IGEKDPNGRHLCVKMLDWFD 68 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~-----------~~~~~~~~~E~~~l~~-l~h~~~~g~~~Iv~l~~~f~ 68 (351)
+.||.|+||.||+|.+.. .++.+|+|.+... ......+.+|+.++.. +.|+| |+++++++.
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~------i~~~~~~~~ 79 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPN------IVRYYKTFL 79 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCC------eeeEEeeEc
Confidence 679999999999999877 6899999998532 1122345678887765 67777 999999999
Q ss_pred eCCeEEEEEecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-cccc
Q psy2006 69 YHGHMCIAFEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKRE 144 (351)
Q Consensus 69 ~~~~~~lV~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~ 144 (351)
.+++.|+||||+ +++|.+++... ....+++..+..++.|++.+ +.|||+ .+++
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~~i~ 136 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLA-----------------------LRYLHKEKRIV 136 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-----------------------HHHhccCCcee
Confidence 999999999999 88999988542 22356777777777777777 999996 7899
Q ss_pred ccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 145 VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 145 h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
|+|+++.|+.+.
T Consensus 137 H~dl~~~nil~~-------------------------------------------------------------------- 148 (269)
T cd08528 137 HRDLTPNNIMLG-------------------------------------------------------------------- 148 (269)
T ss_pred ecCCCHHHEEEC--------------------------------------------------------------------
Confidence 999999999876
Q ss_pred CchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeee
Q psy2006 225 PSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGC 302 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 302 (351)
....++|+|||.+..... ......|+..|++||.+.+..++.++|+||||+
T Consensus 149 ---------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ 201 (269)
T cd08528 149 ---------------------------EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGC 201 (269)
T ss_pred ---------------------------CCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHH
Confidence 234689999998865332 223456788999999998888899999999999
Q ss_pred eeEeeccccccccccC
Q psy2006 303 IIFELYLGITLMARKT 318 (351)
Q Consensus 303 ~l~~l~tG~~pf~~~~ 318 (351)
++|++++|..||...+
T Consensus 202 ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 202 ILYQMCTLQPPFYSTN 217 (269)
T ss_pred HHHHHHhCCCcccccC
Confidence 9999999999997654
No 365
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.94 E-value=2.7e-27 Score=212.02 Aligned_cols=197 Identities=23% Similarity=0.324 Sum_probs=167.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+||.||++.+..+++.||+|++.... .....+.+|+++++.++|+| ++++.+.+...+..++|+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN------IIKYYESFEEKGKLCIVME 79 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCC------hhheEEEEecCCEEEEEEE
Confidence 67999999999999998899999999997532 34566788999999999877 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 79 IL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
++ +++|.+++.+.. ...+++..+..++.|++.+ +.+||+.|++|+|+++.|+.+
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~-----------------------l~~lh~~~~~H~dl~~~nil~ 136 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA-----------------------LKYLHSRKILHRDIKPQNIFL 136 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHH-----------------------HHHHHhCCEecccCChHHeEE
Confidence 99 789999998753 3467788888888888888 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 137 ~~------------------------------------------------------------------------------ 138 (258)
T cd08215 137 TS------------------------------------------------------------------------------ 138 (258)
T ss_pred cC------------------------------------------------------------------------------
Confidence 62
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
...++|+|||.+..... ......|++.|+|||...+..++.++|+||+|++++++++|..
T Consensus 139 -----------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 201 (258)
T cd08215 139 -----------------NGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201 (258)
T ss_pred -----------------CCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCC
Confidence 34689999998865332 2234577889999999988889999999999999999999999
Q ss_pred cccccCCCce
Q psy2006 313 LMARKTKTKY 322 (351)
Q Consensus 313 pf~~~~~~~~ 322 (351)
||...+..++
T Consensus 202 p~~~~~~~~~ 211 (258)
T cd08215 202 PFEGENLLEL 211 (258)
T ss_pred CCCCCcHHHH
Confidence 9977764443
No 366
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=1e-27 Score=221.56 Aligned_cols=195 Identities=22% Similarity=0.344 Sum_probs=154.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------- 71 (351)
++||.|+||.||+|.++.+++.||+|++.... .......+|+++++.++|++ |+++++.+....
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPN------VVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCC------ccchhhheecccccccccC
Confidence 57999999999999999999999999996432 12345678999999999877 999999886543
Q ss_pred -eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 -HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 -~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
.+++||||++++|.+.+.... ..+++..++.++.|++.+ |+|||++|++|+|+++
T Consensus 88 ~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~a-----------------------l~~lH~~~i~H~dl~p 143 (311)
T cd07866 88 GSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEG-----------------------INYLHENHILHRDIKA 143 (311)
T ss_pred ceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCH
Confidence 579999999889988877643 357888888888888888 9999999999999999
Q ss_pred CCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhh
Q psy2006 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~ 230 (351)
+|+.+.+
T Consensus 144 ~nil~~~------------------------------------------------------------------------- 150 (311)
T cd07866 144 ANILIDN------------------------------------------------------------------------- 150 (311)
T ss_pred HHEEECC-------------------------------------------------------------------------
Confidence 9987652
Q ss_pred cccchhhhhhccchhhhhhhccccceeeeccCCcceecc--------------ccccccccceeeCceeeecC-CCCCcc
Q psy2006 231 HAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--------------HHSTIVSTRHYRAPEVILEL-GWAQPC 295 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--------------~~~~~~gt~~y~aPE~~~~~-~~~~~~ 295 (351)
...++|+|||++..... ......+++.|+|||.+.+. .++.++
T Consensus 151 ----------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 208 (311)
T cd07866 151 ----------------------QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV 208 (311)
T ss_pred ----------------------CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchh
Confidence 23467777776643211 11223567889999988654 578899
Q ss_pred ceeeeeeeeEeeccccccccccCCCc
Q psy2006 296 DVWSIGCIIFELYLGITLMARKTKTK 321 (351)
Q Consensus 296 DiwslG~~l~~l~tG~~pf~~~~~~~ 321 (351)
|+||+||++|+|++|.+||.+.+..+
T Consensus 209 Dv~slG~il~el~~g~~~~~~~~~~~ 234 (311)
T cd07866 209 DIWGIGCVFAEMFTRRPILQGKSDID 234 (311)
T ss_pred HhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999998776544
No 367
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.94 E-value=2.4e-27 Score=218.34 Aligned_cols=193 Identities=23% Similarity=0.380 Sum_probs=158.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-------
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------- 71 (351)
++||.|+||.||+|.++.+++.||+|++.... .......+|+++++.++|+| |+++++++....
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~------i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRN------IVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCC------eeeeeheecCcchhhhccc
Confidence 57999999999999998899999999997532 22345678999999999887 999999987655
Q ss_pred ---eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc
Q psy2006 72 ---HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV 148 (351)
Q Consensus 72 ---~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~ 148 (351)
++|+|+||+++++.+.+.... ..+++..+..++.|++.| |.|||+.|++|+|+
T Consensus 87 ~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~a-----------------------L~~LH~~~i~H~dl 142 (302)
T cd07864 87 DKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEG-----------------------LNYCHKKNFLHRDI 142 (302)
T ss_pred cCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCC
Confidence 899999999888988877653 367888888888888888 99999999999999
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
++.|+.+.
T Consensus 143 ~p~nili~------------------------------------------------------------------------ 150 (302)
T cd07864 143 KCSNILLN------------------------------------------------------------------------ 150 (302)
T ss_pred CHHHEEEC------------------------------------------------------------------------
Confidence 99998776
Q ss_pred hhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecC-CCCCccceeeeeee
Q psy2006 229 RVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCI 303 (351)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~ 303 (351)
....+||+|||.+...... .....++..|+|||.+.+. .++.++|+||+||+
T Consensus 151 -----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 207 (302)
T cd07864 151 -----------------------NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 207 (302)
T ss_pred -----------------------CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence 2356899999988653221 1223457789999988654 46889999999999
Q ss_pred eEeeccccccccccCC
Q psy2006 304 IFELYLGITLMARKTK 319 (351)
Q Consensus 304 l~~l~tG~~pf~~~~~ 319 (351)
++++++|.+||...+.
T Consensus 208 ~~el~~g~~~~~~~~~ 223 (302)
T cd07864 208 LGELFTKKPIFQANQE 223 (302)
T ss_pred HHHHHhCCCCCCCCCh
Confidence 9999999999976543
No 368
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=1.2e-27 Score=217.91 Aligned_cols=196 Identities=24% Similarity=0.392 Sum_probs=163.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
++.||.|++|.||+|.+..+++.+|+|.+.... .......+|+.+++.++|++ |+++++++..++..++|+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~ 77 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPN------IIKLLDVFRHKGDLYLVF 77 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCC------cchHHHhhccCCCEEEEE
Confidence 367999999999999998899999999997542 23456778999999999777 999999999999999999
Q ss_pred eccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 78 E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
||++++|.+++.... ..+++..+..++.|++.+ |.|||+.+++|+|+++.|+.+.+
T Consensus 78 e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~-----------------------l~~LH~~~i~H~dl~p~nili~~ 133 (283)
T cd05118 78 EFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQG-----------------------LAFCHSHGILHRDLKPENLLINT 133 (283)
T ss_pred eccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeecCcCHHHEEECC
Confidence 999889999887754 467777788888888777 99999999999999999998762
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (283)
T cd05118 134 -------------------------------------------------------------------------------- 133 (283)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEeecccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++|+|||.+...... .....++..|+|||.+.+. .++.++|+||+|+++|+++||..|
T Consensus 134 ---------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~ 198 (283)
T cd05118 134 ---------------EGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPL 198 (283)
T ss_pred ---------------CCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 346899999987653322 2335677889999998776 678999999999999999999999
Q ss_pred ccccCCCc
Q psy2006 314 MARKTKTK 321 (351)
Q Consensus 314 f~~~~~~~ 321 (351)
|...+..+
T Consensus 199 ~~~~~~~~ 206 (283)
T cd05118 199 FPGKSEID 206 (283)
T ss_pred CCCCCHHH
Confidence 97766533
No 369
>KOG0984|consensus
Probab=99.94 E-value=1.5e-27 Score=198.78 Aligned_cols=195 Identities=17% Similarity=0.246 Sum_probs=157.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
++.||+|+||.|=+-++.++|...|+|.+... ....+...+|+++-.+-. ..| ++|+.++.+-..+.+||.||
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~-~CP----f~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTV-DCP----FTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCC-CCC----eEEEeehhhhccccEEEeHH
Confidence 35799999999999999999999999999753 234455667777655432 222 39999999999999999999
Q ss_pred ccCCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc-cccccccCCCCeEE
Q psy2006 79 ILGLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK-KREVRRVRRCDIRL 155 (351)
Q Consensus 79 ~~g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~d~k~~ni~l 155 (351)
.+..||..+-+.. ....+||..+-+++-.+..| |.|||++ .++|||+||+|+.+
T Consensus 126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~a-----------------------l~~L~~kL~vIHRDvKPsNiLI 182 (282)
T KOG0984|consen 126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHA-----------------------LEFLHSKLSVIHRDVKPSNILI 182 (282)
T ss_pred HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHH-----------------------HHHHHHHhhhhhccCCcceEEE
Confidence 9999998876544 33567888888888777777 9999986 59999999999987
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 183 n------------------------------------------------------------------------------- 183 (282)
T KOG0984|consen 183 N------------------------------------------------------------------------------- 183 (282)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc--ccccccceeeCceeeec----CCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILE----LGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~~l~~l~t 309 (351)
..+.||+||||.+....... +-..|+..|||||.+.. .+|+.++|+||||+++.||++
T Consensus 184 ----------------~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 184 ----------------YDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ----------------cCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 35789999999987643322 33678899999998863 478999999999999999999
Q ss_pred ccccccccC
Q psy2006 310 GITLMARKT 318 (351)
Q Consensus 310 G~~pf~~~~ 318 (351)
+++|++..-
T Consensus 248 lr~PY~~w~ 256 (282)
T KOG0984|consen 248 LRFPYESWG 256 (282)
T ss_pred ccccccccC
Confidence 999997653
No 370
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94 E-value=3.4e-27 Score=211.24 Aligned_cols=191 Identities=20% Similarity=0.263 Sum_probs=165.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh---hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC--CeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~--~~~~lV 76 (351)
+.||+|++|.||+|.+..+++.|++|++.... ...+.+.+|+.+++++.|++ |+++++.+... ...++|
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN------IVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCC------EeeEEEEEecCCCCeEEEE
Confidence 57999999999999998899999999997643 34567789999999999877 99999999998 899999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
+||+ +++|.+++.... .+++..+..++.|++.+ +.|||+.+++|+|+++.|+.+
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~~~h~dl~p~ni~i 134 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEG-----------------------LAYLHSNGIVHRDIKGANILV 134 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHH-----------------------HHHHHHCCccccCCCHHHEEE
Confidence 9999 999999998765 67788888888888877 999999999999999999988
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.+
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (260)
T cd06606 135 DS------------------------------------------------------------------------------ 136 (260)
T ss_pred cC------------------------------------------------------------------------------
Confidence 72
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
...++|+|||.+...... .....++..|++||.+.+...+.++|+||+|++++++++|
T Consensus 137 -----------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g 199 (260)
T cd06606 137 -----------------DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATG 199 (260)
T ss_pred -----------------CCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 356899999988764322 3446678899999999888889999999999999999999
Q ss_pred cccccccC
Q psy2006 311 ITLMARKT 318 (351)
Q Consensus 311 ~~pf~~~~ 318 (351)
..||....
T Consensus 200 ~~p~~~~~ 207 (260)
T cd06606 200 KPPWSELG 207 (260)
T ss_pred CCCCCCCC
Confidence 99998765
No 371
>KOG0587|consensus
Probab=99.94 E-value=1.6e-26 Score=226.60 Aligned_cols=200 Identities=21% Similarity=0.302 Sum_probs=169.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC-----CeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH-----GHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~-----~~~~lV 76 (351)
+.||.|.||.||+++++.+++.+|+|+.....+..++...|.++|+.+.+ ||| ++..+++|... +.+|||
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~-hpn----v~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSH-HPN----VATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccC-CCC----cceEEEEEEEecCCCCCeEEEE
Confidence 56999999999999999999999999999877778888899999999863 333 99999998744 389999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
|||| |||..|+++.-...+ +.++.+.++.++++.|+.+||...++|||+|-.||.|
T Consensus 100 MEfC~gGSVTDLVKn~~g~r-----------------------l~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL 156 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTKGNR-----------------------LKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL 156 (953)
T ss_pred eeccCCccHHHHHhhhcccc-----------------------hhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE
Confidence 9999 999999998875333 5566666777777777999999999999999999999
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 157 T------------------------------------------------------------------------------- 157 (953)
T KOG0587|consen 157 T------------------------------------------------------------------------------- 157 (953)
T ss_pred e-------------------------------------------------------------------------------
Confidence 8
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecC-----CCCCccceeeeeeeeEee
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILEL-----GWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~~l~~l 307 (351)
....|||+|||.+...+. ..++++|||.|||||++.-. .|...+|+||||++..||
T Consensus 158 ----------------~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEl 221 (953)
T KOG0587|consen 158 ----------------ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEM 221 (953)
T ss_pred ----------------ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehh
Confidence 356799999999876443 45689999999999999742 467889999999999999
Q ss_pred ccccccccccCCCceee
Q psy2006 308 YLGITLMARKTKTKYFY 324 (351)
Q Consensus 308 ~tG~~pf~~~~~~~~~~ 324 (351)
.-|.+|+...-.+..+.
T Consensus 222 adG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 222 AEGAPPLCDMHPMRALF 238 (953)
T ss_pred cCCCCCccCcchhhhhc
Confidence 99999998887776654
No 372
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.94 E-value=3.8e-27 Score=211.34 Aligned_cols=198 Identities=19% Similarity=0.251 Sum_probs=164.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
.++||+|+||.||++.+..+++.+|+|.+... ........+|+.+++.++|+| |+++.+.+....+.++||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN------IISYKEAFLDGNKLCIVM 78 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCC------chhhhhhhccCCEEEEEe
Confidence 36899999999999999889999999999753 233456678999999999877 999999999999999999
Q ss_pred ecc-CCCHHHHHHhcC--CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 78 EIL-GLSVFDFLKENN--YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~--~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
||+ +++|.+++.+.. ...+++..+..++.|++.| |.|||+.|++|+|+++.|+.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-----------------------l~~lh~~~i~h~~l~~~ni~ 135 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG-----------------------LQALHEQKILHRDLKSANIL 135 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH-----------------------HHHHhhCCcccCCCCcceEE
Confidence 999 889999987632 1246666777777777777 99999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.+
T Consensus 136 ~~~----------------------------------------------------------------------------- 138 (256)
T cd08530 136 LVA----------------------------------------------------------------------------- 138 (256)
T ss_pred Eec-----------------------------------------------------------------------------
Confidence 872
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceeccc-cccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++++|||++...... .....+++.|++||.+.+..++.++|+||+|++++++++|..|
T Consensus 139 ------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p 200 (256)
T cd08530 139 ------------------NDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPP 200 (256)
T ss_pred ------------------CCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 346899999988654322 2335678899999999888889999999999999999999999
Q ss_pred ccccCCCce
Q psy2006 314 MARKTKTKY 322 (351)
Q Consensus 314 f~~~~~~~~ 322 (351)
|...+..+.
T Consensus 201 ~~~~~~~~~ 209 (256)
T cd08530 201 FEARSMQDL 209 (256)
T ss_pred CCCCCHHHH
Confidence 987765443
No 373
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.94 E-value=5.7e-27 Score=213.65 Aligned_cols=198 Identities=15% Similarity=0.142 Sum_probs=158.0
Q ss_pred ccccCcccceEEEEEEee----cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee-CCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYE----VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY-HGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~-~~~~~ 74 (351)
+.||+|+||.||+|.+.. .++.||+|++... ....+.+.+|+.+++.++|+| |+++++++.. +...+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~~~~~~~~~~~~ 85 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQN------ILPILHVCIEDGEPPF 85 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCC------CCeEEEEEecCCCCCE
Confidence 579999999999999876 3688999998743 233566788999999999888 9999998765 46899
Q ss_pred EEEecc-CCCHHHHHHhcCC------CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNY------LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~------~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
+++||+ +++|.+++..... ..+++..+..++.|++.| |.|||+.+++|+|
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~-----------------------l~~LH~~~i~H~d 142 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACG-----------------------MSYLHKRGVIHKD 142 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCCEeecc
Confidence 999999 7999999977532 246666777777777777 9999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+++.|+.+.+
T Consensus 143 i~p~nil~~~---------------------------------------------------------------------- 152 (280)
T cd05043 143 IAARNCVIDE---------------------------------------------------------------------- 152 (280)
T ss_pred cCHhhEEEcC----------------------------------------------------------------------
Confidence 9999998762
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-----cccccccceeeCceeeecCCCCCccceeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-----HSTIVSTRHYRAPEVILELGWAQPCDVWSIGC 302 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 302 (351)
...+||+|||+++..... .....++..|+|||.+.+..++.++|+||+||
T Consensus 153 -------------------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~ 207 (280)
T cd05043 153 -------------------------ELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGV 207 (280)
T ss_pred -------------------------CCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHH
Confidence 246889999988642111 11233456799999998888899999999999
Q ss_pred eeEeecc-ccccccccCCCcee
Q psy2006 303 IIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 303 ~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
++|++++ |..||...+..++.
T Consensus 208 ~l~el~~~g~~p~~~~~~~~~~ 229 (280)
T cd05043 208 LLWELMTLGQTPYVEIDPFEMA 229 (280)
T ss_pred HHHHHhcCCCCCcCcCCHHHHH
Confidence 9999998 99999877655543
No 374
>KOG4278|consensus
Probab=99.94 E-value=6.4e-28 Score=228.25 Aligned_cols=198 Identities=19% Similarity=0.224 Sum_probs=168.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
-|||-|.||.||-|.+++..-.||||.++.+....++++.|+.+|+.+.|+| +|+|+++++-..-+|||.|||
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpN------LVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCcc------HHHHhhhhccCCCeEEEEeccc
Confidence 3799999999999999999999999999988888899999999999999888 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
.|+|.++++++....++--...-++. ||..|++||-.++++|||+..-|+.++
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAt-----------------------QIsSaMeYLEkknFIHRDLAARNCLVg---- 399 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMAT-----------------------QISSAMEYLEKKNFIHRDLAARNCLVG---- 399 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHH-----------------------HHHHHHHHHHHhhhhhhhhhhhhcccc----
Confidence 99999999998744444333444444 444559999999999999988887776
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 400 -------------------------------------------------------------------------------- 399 (1157)
T KOG4278|consen 400 -------------------------------------------------------------------------------- 399 (1157)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceecccc-cccccc---ceeeCceeeecCCCCCccceeeeeeeeEeecc-cccccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHH-STIVST---RHYRAPEVILELGWAQPCDVWSIGCIIFELYL-GITLMA 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~-~~~~gt---~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t-G~~pf~ 315 (351)
....||++|||++++..... ....|. ..|+|||.+-...++.++|+|+||++|||++| |..||.
T Consensus 400 -----------EnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP 468 (1157)
T KOG4278|consen 400 -----------ENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP 468 (1157)
T ss_pred -----------ccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC
Confidence 34578999999998754433 333443 47999999999999999999999999999996 999999
Q ss_pred ccCCCcee
Q psy2006 316 RKTKTKYF 323 (351)
Q Consensus 316 ~~~~~~~~ 323 (351)
+-+-..+|
T Consensus 469 GidlSqVY 476 (1157)
T KOG4278|consen 469 GIDLSQVY 476 (1157)
T ss_pred CccHHHHH
Confidence 98877665
No 375
>KOG0603|consensus
Probab=99.94 E-value=3.8e-28 Score=231.61 Aligned_cols=210 Identities=22% Similarity=0.280 Sum_probs=168.9
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
.+|.|+|+.|-++.+..+++.+|+|++.+. .....+|+.++.... |+| |+++.+.+.+..++|+|||.+
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~n------iv~~~~v~~~~~~~~~v~e~l~ 399 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPN------IVKSHDVYEDGKEIYLVMELLD 399 (612)
T ss_pred ccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCc------ceeecceecCCceeeeeehhcc
Confidence 589999999999999999999999999864 223345776666654 444 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
|+-+.+.+.... .....+..|+.||+.+ ++|||++|++|||+|++||.+.+
T Consensus 400 g~ell~ri~~~~---~~~~e~~~w~~~lv~A-----------------------v~~LH~~gvvhRDLkp~NIL~~~--- 450 (612)
T KOG0603|consen 400 GGELLRRIRSKP---EFCSEASQWAAELVSA-----------------------VDYLHEQGVVHRDLKPGNILLDG--- 450 (612)
T ss_pred ccHHHHHHHhcc---hhHHHHHHHHHHHHHH-----------------------HHHHHhcCeeecCCChhheeecC---
Confidence 877777766653 3336666788888777 99999999999999999998840
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 451 -------------------------------------------------------------------------------- 450 (612)
T KOG0603|consen 451 -------------------------------------------------------------------------------- 450 (612)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCC
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKT 320 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~ 320 (351)
..++++|+|||.+........+.+-|..|.|||++...+++.+.|+||||++||+|++|..||......
T Consensus 451 -----------~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 451 -----------SAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred -----------CCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 246799999999876554444556678999999999999999999999999999999999999998877
Q ss_pred -ceee-ecccCCcccccccccccccCccC
Q psy2006 321 -KYFY-HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 321 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
++.. -+...++ ..||++||+|
T Consensus 520 ~ei~~~i~~~~~s------~~vS~~AKdL 542 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS------ECVSDEAKDL 542 (612)
T ss_pred HHHHHhhcCCccc------cccCHHHHHH
Confidence 3322 1221222 5899999987
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=6.4e-27 Score=218.99 Aligned_cols=191 Identities=25% Similarity=0.395 Sum_probs=155.3
Q ss_pred ccccCcccceEEEEEEeec--CcEEEEEEecchh---hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeC----C
Q psy2006 2 CSLNCVASNHVCTNVVYEV--DSVVALKIIKNVE---KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYH----G 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~--~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~----~ 71 (351)
+.||+|+||.||+|.+..+ ++.||+|++.... ...+...+|+.+++++. |+| |+++++.+... .
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~------iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKN------ITCLYDMDIVFPGNFN 79 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCC------hheeeeeeeeccccCC
Confidence 5799999999999999877 8999999987431 22345678999999994 666 99999875433 3
Q ss_pred eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 72 ~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.+++++|+++++|.+++.... .+++..++.++.|++.| |.|||++|++|||+|++
T Consensus 80 ~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~a-----------------------L~~LH~~givH~dlkp~ 134 (332)
T cd07857 80 ELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCG-----------------------LKYIHSANVLHRDLKPG 134 (332)
T ss_pred cEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCHH
Confidence 789999999999999987654 57888888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.
T Consensus 135 Nili~--------------------------------------------------------------------------- 139 (332)
T cd07857 135 NLLVN--------------------------------------------------------------------------- 139 (332)
T ss_pred HeEEc---------------------------------------------------------------------------
Confidence 99876
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeec-CCCCCccceeeeeee
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCI 303 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~ 303 (351)
..+.++|+|||.+..... ......|++.|+|||.+.+ ..++.++|+||+||+
T Consensus 140 --------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~ 199 (332)
T cd07857 140 --------------------ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI 199 (332)
T ss_pred --------------------CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH
Confidence 134689999998864221 1223568899999998765 467899999999999
Q ss_pred eEeeccccccccccC
Q psy2006 304 IFELYLGITLMARKT 318 (351)
Q Consensus 304 l~~l~tG~~pf~~~~ 318 (351)
++++++|.+||...+
T Consensus 200 l~~l~~g~~pf~~~~ 214 (332)
T cd07857 200 LAELLGRKPVFKGKD 214 (332)
T ss_pred HHHHHhCCcCCCCCC
Confidence 999999999997654
No 377
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94 E-value=7.5e-27 Score=211.85 Aligned_cols=197 Identities=15% Similarity=0.147 Sum_probs=154.9
Q ss_pred ccccCcccceEEEEEEee---cCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC----
Q psy2006 2 CSLNCVASNHVCTNVVYE---VDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG---- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~---- 71 (351)
+.||+|+||+||+|.++. +++.||||++... ....+.+.+|+++++.+.|+| |+++++++....
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPN------VIKLIGVSLRSRAKGR 78 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCC------cceEEEEEccCCCCCc
Confidence 579999999999998654 5789999999753 233456788999999999887 999999887543
Q ss_pred --eEEEEEecc-CCCHHHHHHhcC----CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccc
Q psy2006 72 --HMCIAFEIL-GLSVFDFLKENN----YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKRE 144 (351)
Q Consensus 72 --~~~lV~E~~-g~sL~~~l~~~~----~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 144 (351)
..++++||+ +++|.+++.... ...+++..+..++.|++.+ ++|||+.+++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~-----------------------l~~lH~~~i~ 135 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG-----------------------MEYLSSKNFI 135 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCEe
Confidence 347899999 899998875432 1235666677777777766 9999999999
Q ss_pred ccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 145 VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 145 h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
|+|+|+.|+.+.+
T Consensus 136 H~dikp~nili~~------------------------------------------------------------------- 148 (273)
T cd05074 136 HRDLAARNCMLNE------------------------------------------------------------------- 148 (273)
T ss_pred ecccchhhEEEcC-------------------------------------------------------------------
Confidence 9999999998762
Q ss_pred CchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccceeeCceeeecCCCCCccceee
Q psy2006 225 PSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRHYRAPEVILELGWAQPCDVWS 299 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 299 (351)
...++++|||.+..... ......+++.|++||.+....++.++|+||
T Consensus 149 ----------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s 200 (273)
T cd05074 149 ----------------------------NMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWA 200 (273)
T ss_pred ----------------------------CCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHH
Confidence 24588999998765321 112234557899999998888899999999
Q ss_pred eeeeeEeecc-ccccccccCCCce
Q psy2006 300 IGCIIFELYL-GITLMARKTKTKY 322 (351)
Q Consensus 300 lG~~l~~l~t-G~~pf~~~~~~~~ 322 (351)
|||++|++++ |.+||.+.+..+.
T Consensus 201 lG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 201 FGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred HHHHHHHHhhCCCCCCCCCCHHHH
Confidence 9999999998 9999987765544
No 378
>KOG1006|consensus
Probab=99.94 E-value=5.8e-28 Score=208.20 Aligned_cols=196 Identities=23% Similarity=0.281 Sum_probs=152.2
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+..||.|+||+|++-.++.+|+.+|||.++... ....+++.|..+..+-+ ..+ +||+.+++.-.++-.||.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-~cp----~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-NCP----NIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-CCc----HHHHHhhhhhcCCceeeeHH
Confidence 357999999999999999999999999997643 44556677776655532 223 39999999999999999999
Q ss_pred ccCCCHHHHHHhc---CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeE
Q psy2006 79 ILGLSVFDFLKEN---NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIR 154 (351)
Q Consensus 79 ~~g~sL~~~l~~~---~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~ 154 (351)
.|..||..+-+.- ....+||+.+- .+....+.||+||-. ..|+|||+||+||.
T Consensus 144 LMd~SlDklYk~vy~vq~~~ipE~Ilg-----------------------~ItvatV~AL~yLK~~lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 144 LMDISLDKLYKRVYSVQKSRIPENILG-----------------------HITVATVDALDYLKEELKIIHRDVKPSNIL 200 (361)
T ss_pred HHhhhHHHHHHHHHHHHhccCcHhhhh-----------------------heeeeehhHHHHHHHHhhhhhccCChhheE
Confidence 9988877654432 22234444444 444445555999875 46999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
|-
T Consensus 201 ld------------------------------------------------------------------------------ 202 (361)
T KOG1006|consen 201 LD------------------------------------------------------------------------------ 202 (361)
T ss_pred Ee------------------------------------------------------------------------------
Confidence 86
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeee--cCCCCCccceeeeeeeeEeeccc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVIL--ELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~~l~~l~tG 310 (351)
.++.|||+|||.|..... ..+--+|+..|||||.+- +.++..++|+||||++++|++||
T Consensus 203 -----------------r~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 203 -----------------RHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred -----------------cCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 568999999999876332 234467889999999986 34689999999999999999999
Q ss_pred cccccccCC
Q psy2006 311 ITLMARKTK 319 (351)
Q Consensus 311 ~~pf~~~~~ 319 (351)
.+|+.+.+.
T Consensus 266 ~fPyr~w~s 274 (361)
T KOG1006|consen 266 NFPYRKWDS 274 (361)
T ss_pred CCCcchHHH
Confidence 999988764
No 379
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=4.3e-27 Score=211.99 Aligned_cols=194 Identities=23% Similarity=0.262 Sum_probs=158.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch------hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV------EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++||.|+||.||++.+...+..+++|+++.. ......+.+|+.+++.++|+| |+++++++......|+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~l 79 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPA------IVKFHASFLERDAFCI 79 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCc------HHHHHHHHhcCCceEE
Confidence 6899999999999999888887888887531 122345668999999999888 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhc--CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 76 AFEIL-GLSVFDFLKEN--NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~--~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
||||+ +++|.+++... ....+++..++.++.|++.+ +.|||+.|++|+|+++.|
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~lH~~~i~h~~l~~~n 136 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLG-----------------------VHYMHQRRILHRDLKAKN 136 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHH-----------------------HHHHHHcCccccCCChhh
Confidence 99999 88999988753 22357777777777777777 999999999999999999
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcc
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHA 232 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~ 232 (351)
+.+.+
T Consensus 137 ili~~--------------------------------------------------------------------------- 141 (260)
T cd08222 137 IFLKN--------------------------------------------------------------------------- 141 (260)
T ss_pred eEeec---------------------------------------------------------------------------
Confidence 97751
Q ss_pred cchhhhhhccchhhhhhhccccceeeeccCCcceecc---ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
..++|+|||.+..... ......|++.|+|||.+.+..++.++|+||+|++++++++
T Consensus 142 ---------------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~ 200 (260)
T cd08222 142 ---------------------NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC 200 (260)
T ss_pred ---------------------CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 2478999998765321 2234567889999999888888899999999999999999
Q ss_pred ccccccccCCC
Q psy2006 310 GITLMARKTKT 320 (351)
Q Consensus 310 G~~pf~~~~~~ 320 (351)
|..||...+..
T Consensus 201 ~~~~~~~~~~~ 211 (260)
T cd08222 201 LAHAFEGQNFL 211 (260)
T ss_pred CCCCCCCccHH
Confidence 99999765543
No 380
>KOG0199|consensus
Probab=99.94 E-value=2.5e-27 Score=226.87 Aligned_cols=197 Identities=16% Similarity=0.178 Sum_probs=162.8
Q ss_pred ccccCcccceEEEEEEeec-C--cEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEV-D--SVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~-~--~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
|+||+|.||+||+|.+... | -.||||.+.... .....+++|+.+|.+|.|+| +++||+...+ .-+.||
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~h------liRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPH------LIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcc------eeEEeeeecc-chhhHH
Confidence 6899999999999997652 3 479999997542 24577899999999999999 9999999987 678899
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
||.+ .|||.+.++......|.....-.++.||+.| +.||-+++.+|||+..-|+.|
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~a-----------------------M~YLeskrlvHRDLAARNlll 245 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKA-----------------------MQYLESKRLVHRDLAARNLLL 245 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHH-----------------------HHHHhhhhhhhhhhhhhhhee
Confidence 9999 9999999998544567777777888888887 999999999999999888877
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 246 a------------------------------------------------------------------------------- 246 (1039)
T KOG0199|consen 246 A------------------------------------------------------------------------------- 246 (1039)
T ss_pred c-------------------------------------------------------------------------------
Confidence 6
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccccc------ccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHST------IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
....|||+|||+.+-....... ..-...|.|||.+..+.|+.++|+|++||++|||.|
T Consensus 247 ----------------sprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFt 310 (1039)
T KOG0199|consen 247 ----------------SPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFT 310 (1039)
T ss_pred ----------------ccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhc
Confidence 2356899999987753322211 112346899999999999999999999999999996
Q ss_pred -ccccccccCCCcee
Q psy2006 310 -GITLMARKTKTKYF 323 (351)
Q Consensus 310 -G~~pf~~~~~~~~~ 323 (351)
|+.||.|.....++
T Consensus 311 yGEePW~G~~g~qIL 325 (1039)
T KOG0199|consen 311 YGEEPWVGCRGIQIL 325 (1039)
T ss_pred cCCCCCCCCCHHHHH
Confidence 99999998876665
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94 E-value=9e-27 Score=213.29 Aligned_cols=190 Identities=22% Similarity=0.268 Sum_probs=155.2
Q ss_pred ccccCcccceEEEEEEe---ecCcEEEEEEecchh-----hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCe
Q psy2006 2 CSLNCVASNHVCTNVVY---EVDSVVALKIIKNVE-----KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGH 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~ 72 (351)
+.||+|+||.||++.+. .+++.||+|++.... ...+....|+++++.+. |++ |+.+++.|...+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~------i~~~~~~~~~~~~ 79 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPF------LVTLHYAFQTDTK 79 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcc------hhhhheeeecCCE
Confidence 67999999999999864 367899999997532 22345678999999995 555 9999999999999
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.|+||||+ +++|.+++.... .+++..++.++.|++.+ |.|||+.+++|+|+++.
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~-----------------------l~~lH~~~~~H~dl~p~ 134 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLA-----------------------LDHLHQLGIIYRDIKLE 134 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHH-----------------------HHHHHHCCeeccCCCHH
Confidence 99999999 889999987653 57788888888888888 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+.+
T Consensus 135 nil~~~-------------------------------------------------------------------------- 140 (288)
T cd05583 135 NILLDS-------------------------------------------------------------------------- 140 (288)
T ss_pred HeEECC--------------------------------------------------------------------------
Confidence 988761
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceeeecCC--CCCccceeeeeeeeE
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVILELG--WAQPCDVWSIGCIIF 305 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~~l~ 305 (351)
...++|+|||++...... .....|++.|++||.+.+.. .+.++|+||+|++++
T Consensus 141 ---------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 141 ---------------------EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTF 199 (288)
T ss_pred ---------------------CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHH
Confidence 245889999987642221 12345788999999987654 688999999999999
Q ss_pred eecccccccccc
Q psy2006 306 ELYLGITLMARK 317 (351)
Q Consensus 306 ~l~tG~~pf~~~ 317 (351)
++++|..||...
T Consensus 200 el~tg~~p~~~~ 211 (288)
T cd05583 200 ELLTGASPFTVD 211 (288)
T ss_pred HHHhCCCCcccC
Confidence 999999999643
No 382
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93 E-value=1.5e-26 Score=212.83 Aligned_cols=191 Identities=20% Similarity=0.252 Sum_probs=154.9
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||.|+||.||+|.+..+++.||+|.+.... ........|+.++..+. |++ |+++++++......|+|||
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPY------IVKCYGYFITDSDVFICME 94 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCc------hHhhheeeecCCeEEEEee
Confidence 57999999999999998889999999997532 23345566777776664 444 9999999999999999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc-ccccccccCCCCeEEee
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK-KKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~d~k~~ni~l~D 157 (351)
|+++++.+++.... ..+++..+..++.|++.+ +.|||+ .+++|+|+++.|+.+.
T Consensus 95 ~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~-----------------------l~~lH~~~~i~H~dl~p~nill~- 149 (296)
T cd06618 95 LMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKA-----------------------LHYLKEKHGVIHRDVKPSNILLD- 149 (296)
T ss_pred ccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhhCCEecCCCcHHHEEEc-
Confidence 99888888877654 367888888888888888 999997 5999999999999876
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
T Consensus 150 -------------------------------------------------------------------------------- 149 (296)
T cd06618 150 -------------------------------------------------------------------------------- 149 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCC----CCCccceeeeeeeeEeecccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELG----WAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~~l~~l~tG~ 311 (351)
....++|+|||++..... ......+++.|+|||.+.+.. ++.++|+||||+++|++++|.
T Consensus 150 --------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 150 --------------ASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred --------------CCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 234689999998865322 222345778999999987543 688999999999999999999
Q ss_pred cccccc
Q psy2006 312 TLMARK 317 (351)
Q Consensus 312 ~pf~~~ 317 (351)
.||...
T Consensus 216 ~p~~~~ 221 (296)
T cd06618 216 FPYKNC 221 (296)
T ss_pred CCCCcc
Confidence 999763
No 383
>KOG4257|consensus
Probab=99.93 E-value=1.7e-26 Score=218.87 Aligned_cols=197 Identities=19% Similarity=0.239 Sum_probs=163.5
Q ss_pred ccccCcccceEEEEEEee--c--CcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYE--V--DSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~--~--~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++||+|.||.||.|+-.. . .--||||..+.+ .+..+.+..|..+|+.+.|+| ||+|++++... -+||
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHph------IikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPH------IIKLIGVCVEQ-PMWI 467 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcc------hhheeeeeecc-ceeE
Confidence 579999999999998432 2 237999999863 456788999999999999999 99999999764 6899
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|||.+ -|.|..+++..++ .++......+..||+.+ |.|||++..+|||+..-||.
T Consensus 468 vmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~ta-----------------------laYLeSkrfVHRDIAaRNiL 523 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTA-----------------------LAYLESKRFVHRDIAARNIL 523 (974)
T ss_pred EEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHH-----------------------HHHHHhhchhhhhhhhhhee
Confidence 99999 8999999999874 56666666666666666 99999999999999998988
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
++
T Consensus 524 Vs------------------------------------------------------------------------------ 525 (974)
T KOG4257|consen 524 VS------------------------------------------------------------------------------ 525 (974)
T ss_pred ec------------------------------------------------------------------------------
Confidence 77
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecccc----ccccccceeeCceeeecCCCCCccceeeeeeeeEeec-c
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH----STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY-L 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~-t 309 (351)
+...|||+|||+++...... +...-...|||||.+.-+.|+.++|+|.||+.+||++ .
T Consensus 526 -----------------Sp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~l 588 (974)
T KOG4257|consen 526 -----------------SPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSL 588 (974)
T ss_pred -----------------CcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHh
Confidence 23468999999987633222 2233346899999999999999999999999999999 4
Q ss_pred ccccccccCCCceee
Q psy2006 310 GITLMARKTKTKYFY 324 (351)
Q Consensus 310 G~~pf~~~~~~~~~~ 324 (351)
|.-||.+-.+.+++.
T Consensus 589 GvkPfqgvkNsDVI~ 603 (974)
T KOG4257|consen 589 GVKPFQGVKNSDVIG 603 (974)
T ss_pred cCCccccccccceEE
Confidence 999999999999874
No 384
>KOG1035|consensus
Probab=99.93 E-value=7.2e-27 Score=235.52 Aligned_cols=63 Identities=14% Similarity=0.016 Sum_probs=53.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY 69 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~ 69 (351)
++.||+||||.||+++++-+|+.||||.|... ......+.+|+.+|.+|.|+| ||+++..|..
T Consensus 484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpN------VVRYysAWVE 548 (1351)
T KOG1035|consen 484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPN------VVRYYSAWVE 548 (1351)
T ss_pred HHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcc------eeeeehhhhc
Confidence 36799999999999999999999999999754 334456789999999999988 9998877643
No 385
>KOG0576|consensus
Probab=99.93 E-value=7.8e-27 Score=222.65 Aligned_cols=284 Identities=17% Similarity=0.201 Sum_probs=207.7
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+..+|.|.||.||+|+|+.+++..|+|+++... +.......|+-+++.-+|+| |+.+++.+.....+|++|||
T Consensus 20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~n------ivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPN------IVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred eeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcC------hHHHHhhhhhhcCcEEEEEe
Confidence 357999999999999999999999999998754 34456778999999999888 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC------
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD------ 152 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n------ 152 (351)
| ||+|++.=+--+ ++++.++.+.+++.++||.|||++|.+|||+|-.|
T Consensus 94 cgggslQdiy~~Tg-------------------------plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~ 148 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG-------------------------PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE 148 (829)
T ss_pred cCCCcccceeeecc-------------------------cchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence 9 889987533322 57778888888888888999999999999999655
Q ss_pred --eEEeecCCcccCCCC---cccccCCCCccCCccccCC-----------------------------------------
Q psy2006 153 --IRLIDFGSATFDDEH---HSTIVSTRHYRAPERYMAS----------------------------------------- 186 (351)
Q Consensus 153 --i~l~Dfg~s~~~~~~---~~~~~~~~~~~~pe~~~~~----------------------------------------- 186 (351)
+++.|||.+-+.... ...++|||.|++||.-...
T Consensus 149 gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT 228 (829)
T KOG0576|consen 149 GDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT 228 (829)
T ss_pred CceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh
Confidence 588889988663332 4568999999999942211
Q ss_pred -----------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh--------------------------
Q psy2006 187 -----------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR-------------------------- 229 (351)
Q Consensus 187 -----------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~-------------------------- 229 (351)
..--++.+-+|++.+|.++|.+||+++.+|.||+..+.-....
T Consensus 229 kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~ 308 (829)
T KOG0576|consen 229 KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDY 308 (829)
T ss_pred ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccc
Confidence 0011244668999999999999999999999987643211000
Q ss_pred ------hc---------------------ccchhhhhhccchhhhhh--------hccccceeeeccCCcceeccc--cc
Q psy2006 230 ------VH---------------------AQTQADRILSSVSSLVMR--------RVRRCDIRLIDFGSATFDDEH--HS 272 (351)
Q Consensus 230 ------~~---------------------~~~~~~~~~~~~~~~~~~--------~~~~~~vkl~dfg~~~~~~~~--~~ 272 (351)
.+ .....++.+++.+.+... ......++..+|+.....+.. .+
T Consensus 309 ~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~~~ 388 (829)
T KOG0576|consen 309 LWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTMKPR 388 (829)
T ss_pred cchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCcccccc
Confidence 00 000001122222221111 011234567777766543333 56
Q ss_pred cccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 273 TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 273 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
+..+++.+++||+.....+....|.|+++.-..++.-|.+|-.
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 7889999999999988889889999999986667776766643
No 386
>KOG0668|consensus
Probab=99.93 E-value=4.1e-27 Score=199.01 Aligned_cols=193 Identities=21% Similarity=0.347 Sum_probs=153.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC--eEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~--~~~lV~E~ 79 (351)
+++|+|-|+.||-|++..+++.++||+++.. ..+.+.+|+.||+.|+ |..||++|+|...++. ...||+||
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~-----gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLR-----GGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhcc-----CCCCeeehhhhhcCccccCchhHhhh
Confidence 6899999999999999999999999999743 2466789999999997 3333999999998765 78899999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ ..+...+-.. ++.-+++.++++++.||+|||++||+|||+||-|+++.
T Consensus 117 v~n~Dfk~ly~t----------------------------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId-- 166 (338)
T KOG0668|consen 117 VNNTDFKQLYPT----------------------------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID-- 166 (338)
T ss_pred hccccHHHHhhh----------------------------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--
Confidence 9 5555544322 34456777777777779999999999999999999876
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
+
T Consensus 167 ---------h---------------------------------------------------------------------- 167 (338)
T KOG0668|consen 167 ---------H---------------------------------------------------------------------- 167 (338)
T ss_pred ---------h----------------------------------------------------------------------
Confidence 1
Q ss_pred hhccchhhhhhhccccceeeeccCCcceecccc--ccccccceeeCceeeecC-CCCCccceeeeeeeeEeeccccccc-
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGITLM- 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~tG~~pf- 314 (351)
....++|+|+|++.+.+... +-.+.+..|..||++... .+..+.|+|||||++..|+..+.||
T Consensus 168 -------------~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 168 -------------ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred -------------hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence 24578999999998754332 345667788999988764 5688999999999999999866665
Q ss_pred cccCCCcee
Q psy2006 315 ARKTKTKYF 323 (351)
Q Consensus 315 ~~~~~~~~~ 323 (351)
.|.+..+.+
T Consensus 235 hG~dN~DQL 243 (338)
T KOG0668|consen 235 HGHDNYDQL 243 (338)
T ss_pred CCCCCHHHH
Confidence 677666544
No 387
>KOG1167|consensus
Probab=99.93 E-value=4e-26 Score=208.13 Aligned_cols=227 Identities=21% Similarity=0.245 Sum_probs=152.5
Q ss_pred CccccCcccceEEEEEEee---cCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYE---VDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~ 77 (351)
+.+||+|.|++||+|.++. .+++||+|.+... ....++..|+++|..+. |+.||+.+.+.|..+++.++||
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~g-----G~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLG-----GSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhc-----cchhhhcchhhhccCCeeEEEe
Confidence 3689999999999999988 7899999999763 33567889999999997 4446999999999999999999
Q ss_pred ecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe---
Q psy2006 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI--- 153 (351)
Q Consensus 78 E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni--- 153 (351)
||. ..+..++... ++... ++.|++.++.||.++|.+||+|||+||+|+
T Consensus 115 p~~~H~~f~~l~~~-----l~~~~-----------------------i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n 166 (418)
T KOG1167|consen 115 PYFEHDRFRDLYRS-----LSLAE-----------------------IRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN 166 (418)
T ss_pred cccCccCHHHHHhc-----CCHHH-----------------------HHHHHHHHHHHhhhhhccCccccCCCccccccc
Confidence 999 5566666543 33444 444555555559999999999999999996
Q ss_pred ------EEeecCCccc-CCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 154 ------RLIDFGSATF-DDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 154 ------~l~Dfg~s~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
.|+|||+|.. ........+.. |..| .+... .
T Consensus 167 ~~t~rg~LvDFgLA~~~d~~~~~~~s~~--~~~~------------------------------~~~~~----------~ 204 (418)
T KOG1167|consen 167 RRTQRGVLVDFGLAQRYDGYQQTEHSRS--YSGR------------------------------HATPA----------M 204 (418)
T ss_pred cccCCceEEechhHHHHHhhhhhhhhhh--hhcc------------------------------cCCcc----------c
Confidence 8999999963 11111110000 0000 00000 0
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCC-CCccceeeeeeeeE
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIF 305 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~ 305 (351)
....+.+..+ ......+..+.+ +...........||++|+|||++..-+- ++++|+||.|+++.
T Consensus 205 g~~~~~~~~~-----------~~~~p~g~~~~~----~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 205 GKDVHCQSVA-----------TASKPAGYYRRC----NDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred cCcccccccc-----------cccCCCCceecc----CCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 0000000000 000011111111 0112223346789999999999987654 88999999999999
Q ss_pred eeccccccccccC
Q psy2006 306 ELYLGITLMARKT 318 (351)
Q Consensus 306 ~l~tG~~pf~~~~ 318 (351)
.++++.+||-...
T Consensus 270 slls~~~PFf~a~ 282 (418)
T KOG1167|consen 270 SLLSRRYPFFKAK 282 (418)
T ss_pred hhhccccccccCc
Confidence 9999999996554
No 388
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93 E-value=9.2e-26 Score=239.17 Aligned_cols=182 Identities=15% Similarity=0.177 Sum_probs=145.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
+.||+|+||.||+|.++.+++.||+|.+..... ....|+++|++++|+| |+++++++...+..|+||||+
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~Hpn------Iv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPN------IVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCC------cceEEEEEEcCCCCEEEEeCCC
Confidence 469999999999999988999999999975322 2235789999999888 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccc---cccccccccCCCCeEEee
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN---KKKREVRRVRRCDIRLID 157 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~d~k~~ni~l~D 157 (351)
+++|.++++. +++..+..++.|++.| ++|+| +.+++|||+|+.|+.+.+
T Consensus 767 ~g~L~~~l~~-----l~~~~~~~i~~~ia~~-----------------------L~yLH~~~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 767 GKNLSEVLRN-----LSWERRRKIAIGIAKA-----------------------LRFLHCRCSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred CCcHHHHHhc-----CCHHHHHHHHHHHHHH-----------------------HHHhccCCCCCeecCCCCHHhEEECC
Confidence 8999999853 5677777777877777 99999 679999999999998752
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
-+
T Consensus 819 ~~------------------------------------------------------------------------------ 820 (968)
T PLN00113 819 KD------------------------------------------------------------------------------ 820 (968)
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
..++. ++...... ......+|+.|+|||++.+..++.++||||+||++||++||+.||+..
T Consensus 821 -----------------~~~~~-~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~ 881 (968)
T PLN00113 821 -----------------EPHLR-LSLPGLLC-TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE 881 (968)
T ss_pred -----------------ceEEE-eccccccc-cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence 11111 22221111 112236789999999999889999999999999999999999999643
No 389
>KOG0196|consensus
Probab=99.92 E-value=9.5e-26 Score=218.51 Aligned_cols=198 Identities=18% Similarity=0.231 Sum_probs=165.3
Q ss_pred ccccCcccceEEEEEEeecC---cEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVD---SVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|-||.||+|+.+..+ ..||||.++.. ++.+..++.|+.||-+++|+| |++|-++.+...-++||
T Consensus 635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPN------IIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN------IIRLEGVVTKSKPVMII 708 (996)
T ss_pred EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCc------EEEEEEEEecCceeEEE
Confidence 35999999999999988655 58999999864 455678899999999999988 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
.||| .|+|..+++.... .|..-+...+.+.|+.| +.||-+++.+|||+..-||.+
T Consensus 709 TEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsG-----------------------MkYLsdm~YVHRDLAARNILV 764 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASG-----------------------MKYLSDMNYVHRDLAARNILV 764 (996)
T ss_pred hhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHH-----------------------hHHHhhcCchhhhhhhhheee
Confidence 9999 9999999998863 46666666666666666 999999999999998888765
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
-
T Consensus 765 N------------------------------------------------------------------------------- 765 (996)
T KOG0196|consen 765 N------------------------------------------------------------------------------- 765 (996)
T ss_pred c-------------------------------------------------------------------------------
Confidence 4
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceecccc---ccccc---cceeeCceeeecCCCCCccceeeeeeeeEeec-
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH---STIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELY- 308 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~---~~~~g---t~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~- 308 (351)
..-.+|++|||+++...... .+..| ...|+|||.|..+.++.++|+||+|+++||.+
T Consensus 766 ----------------snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS 829 (996)
T KOG0196|consen 766 ----------------SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 829 (996)
T ss_pred ----------------cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecc
Confidence 23467899999987642211 11111 35799999999999999999999999999998
Q ss_pred cccccccccCCCceee
Q psy2006 309 LGITLMARKTKTKYFY 324 (351)
Q Consensus 309 tG~~pf~~~~~~~~~~ 324 (351)
.|+.|+...+++|++-
T Consensus 830 yGERPYWdmSNQdVIk 845 (996)
T KOG0196|consen 830 YGERPYWDMSNQDVIK 845 (996)
T ss_pred cCCCcccccchHHHHH
Confidence 5999999999998873
No 390
>KOG0665|consensus
Probab=99.92 E-value=1.2e-26 Score=204.78 Aligned_cols=194 Identities=23% Similarity=0.430 Sum_probs=162.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC------
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------ 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~------ 71 (351)
++++|.|+- .|.-|.|.-.++.||+|.+... ....+++.+|..+|..+.|+| |++++.+|+-..
T Consensus 22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~n------ii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKN------IISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccc------eeeeeeccCccccHHHHH
Confidence 467888888 7889999999999999999653 234467889999999999888 999999998665
Q ss_pred eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 72 ~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
..|+|||++..+|.+.+... +.-..++.+..|.+-| +.++|+.||+|||+||+
T Consensus 95 e~y~v~e~m~~nl~~vi~~e----lDH~tis~i~yq~~~~-----------------------ik~lhs~~IihRdLkPs 147 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILME----LDHETISYILYQMLCG-----------------------IKHLHSAGIIHRDLKPS 147 (369)
T ss_pred hHHHHHHhhhhHHHHHHHHh----cchHHHHHHHHHHHHH-----------------------HHHHHhcceeecccCcc
Confidence 79999999999999988732 3444555555555555 99999999999999999
Q ss_pred CeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 152 DIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 152 ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
|+.+-
T Consensus 148 nivv~--------------------------------------------------------------------------- 152 (369)
T KOG0665|consen 148 NIVVN--------------------------------------------------------------------------- 152 (369)
T ss_pred cceec---------------------------------------------------------------------------
Confidence 98775
Q ss_pred ccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 232 AQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
..+.+||.|||++..... ..+..+.|..|+|||++.+.++...+||||+||++.||++
T Consensus 153 --------------------~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~ 212 (369)
T KOG0665|consen 153 --------------------SDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELIL 212 (369)
T ss_pred --------------------chhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhh
Confidence 357899999999987443 4567888999999999999999999999999999999999
Q ss_pred ccccccccCCCcee
Q psy2006 310 GITLMARKTKTKYF 323 (351)
Q Consensus 310 G~~pf~~~~~~~~~ 323 (351)
|..+|.|.+.-+.+
T Consensus 213 ~~Vlf~g~d~idQ~ 226 (369)
T KOG0665|consen 213 GTVLFPGKDHIDQW 226 (369)
T ss_pred ceEEecCchHHHHH
Confidence 99999988766554
No 391
>KOG1094|consensus
Probab=99.92 E-value=5e-26 Score=214.32 Aligned_cols=199 Identities=18% Similarity=0.182 Sum_probs=163.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
++||+|.||.|-+|.. ..+..||+|.++... ..+..+.+|+++|.+|+|+| |+.|++++..++-+|+|+||
T Consensus 544 ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPN------IveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPN------IVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCC------eeEEEeeeecCCchHHHHHH
Confidence 7899999999999995 456999999998542 34578899999999998888 99999999999999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ .|+|.+++.+...-........+++.||+.| +.||-+-+++|||+.+.|+.+.
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasg-----------------------maYLes~nfVHrd~a~rNcLv~-- 671 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASG-----------------------MAYLESLNFVHRDLATRNCLVD-- 671 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHH-----------------------HHHHHhhchhhccccccceeec--
Confidence 9 9999999988741112223333455555555 9999999999999999998776
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 672 -------------------------------------------------------------------------------- 671 (807)
T KOG1094|consen 672 -------------------------------------------------------------------------------- 671 (807)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCccee-c----cccccccccceeeCceeeecCCCCCccceeeeeeeeEeec--ccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFD-D----EHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY--LGI 311 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~--tG~ 311 (351)
..+.+||+|||+++.. . ......+-...|||+|.+.-+.++.++|+|+||+++||+. +.+
T Consensus 672 -------------~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e 738 (807)
T KOG1094|consen 672 -------------GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCRE 738 (807)
T ss_pred -------------CcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhh
Confidence 3578999999998742 1 1223345567899999999999999999999999999987 589
Q ss_pred ccccccCCCceeee
Q psy2006 312 TLMARKTKTKYFYH 325 (351)
Q Consensus 312 ~pf~~~~~~~~~~~ 325 (351)
-||...+++++..+
T Consensus 739 ~Py~~lt~e~vven 752 (807)
T KOG1094|consen 739 QPYSQLTDEQVVEN 752 (807)
T ss_pred CchhhhhHHHHHHh
Confidence 99999988877653
No 392
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.91 E-value=1.5e-24 Score=190.29 Aligned_cols=194 Identities=27% Similarity=0.359 Sum_probs=162.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEec
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~ 79 (351)
+.||.|++|+||+|.+..+++.+|+|.+..... ..+.+.+|++.++.+.|++ ++++++++......++++|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~------i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPN------IVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCC------hhhheeeeecCCceEEEEec
Confidence 579999999999999988899999999986432 4567888999999998776 99999999998999999999
Q ss_pred c-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 80 ~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
+ +++|.+++..... .+++..+..++.+++.+ +.++|+.++.|+|+++.|+.+.+
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~di~~~ni~v~~- 133 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEA-----------------------LEYLHSLGIVHRDLKPENILLGM- 133 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeecCCCCHHHEEEcC-
Confidence 9 6699999987642 16777777777777777 99999999999999999988762
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T Consensus 134 -------------------------------------------------------------------------------- 133 (225)
T smart00221 134 -------------------------------------------------------------------------------- 133 (225)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhhhhhhccccceeeeccCCcceeccc----cccccccceeeCceee-ecCCCCCccceeeeeeeeEeecccccc
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH----HSTIVSTRHYRAPEVI-LELGWAQPCDVWSIGCIIFELYLGITL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~~l~~l~tG~~p 313 (351)
...++|+|||.+...... .....++..|++||.. ...+++.++|+|+||++++++++|..|
T Consensus 134 --------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~p 199 (225)
T smart00221 134 --------------DGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEP 199 (225)
T ss_pred --------------CCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 246899999988764332 2445677889999998 566778899999999999999999999
Q ss_pred ccc-cCCC
Q psy2006 314 MAR-KTKT 320 (351)
Q Consensus 314 f~~-~~~~ 320 (351)
|+. ....
T Consensus 200 f~~~~~~~ 207 (225)
T smart00221 200 FSGEGEFT 207 (225)
T ss_pred ccccchhH
Confidence 977 4433
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.90 E-value=1.4e-24 Score=215.86 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=132.4
Q ss_pred ccccCcccceEEEEEEeec----CcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeee------EeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYEV----DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDW------FDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~------f~~~~ 71 (351)
++||+|+||+||+|.+..+ ++.||+|.+.... ..|+.+...+.+..++ ++..+... .....
T Consensus 138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e~l~~~~~~---~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNERVRRACPN---SCADFVYGFLEPVSSKKED 208 (566)
T ss_pred EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHHHHHhhchh---hHHHHHHhhhcccccccCC
Confidence 5799999999999999888 8999999986421 1122222222221111 02111111 23455
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCch-HHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSL-DQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~-~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
.++||+||+ +++|.+++..... .+.. .....-...+. .........+..++.|++.||.|||+++|+|||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~-~~~v~~~l~~~~~~l~-----~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEF-PYNVEPYLLGKVQDLP-----KGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCC-chhHHHHhccchhhcc-----ccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 899999999 8899999986531 1110 00000000000 00122344566777888888999999999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
+.||.+.+
T Consensus 283 P~NILl~~------------------------------------------------------------------------ 290 (566)
T PLN03225 283 PQNIIFSE------------------------------------------------------------------------ 290 (566)
T ss_pred HHHEEEeC------------------------------------------------------------------------
Confidence 99998861
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceec----cccccccccceeeCceeeecC----------------
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD----EHHSTIVSTRHYRAPEVILEL---------------- 289 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~----~~~~~~~gt~~y~aPE~~~~~---------------- 289 (351)
....+||+|||++.... .......+++.|+|||.+...
T Consensus 291 ----------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s 348 (566)
T PLN03225 291 ----------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS 348 (566)
T ss_pred ----------------------CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence 12468999999986422 122456788999999965422
Q ss_pred ------CCCCccceeeeeeeeEeecccccccc
Q psy2006 290 ------GWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 290 ------~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
.+..++||||+||++|+|+++..+++
T Consensus 349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred chhccccCCCCcccHHHHHHHHHHHhCcCCCc
Confidence 23345699999999999998766543
No 394
>KOG1025|consensus
Probab=99.90 E-value=9.2e-25 Score=212.55 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=159.2
Q ss_pred ccccCcccceEEEEEEeecC----cEEEEEEecchh--hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVD----SVVALKIIKNVE--KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++||.|+||+||+|.+...+ -+||||++.... ....++.+|+-+|.+|.|+| +++|+++...+. +-|
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpn------l~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPN------LLRLLGVCMLST-LQL 774 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCch------HHHHhhhcccch-HHH
Confidence 57999999999999986544 489999997543 34678899999999999988 999999998776 889
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
|++++ +|+|.|+++..+. .+-......+..||+.| +.|||.++++|||+-.-||.
T Consensus 775 vtq~mP~G~LlDyvr~hr~-~igsq~lLnw~~QIAkg-----------------------M~YLe~qrlVHrdLaaRNVL 830 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRD-NIGSQDLLNWCYQIAKG-----------------------MKYLEEQRLVHRDLAARNVL 830 (1177)
T ss_pred HHHhcccchHHHHHHHhhc-cccHHHHHHHHHHHHHH-----------------------HHHHHhcchhhhhhhhhhee
Confidence 99999 9999999998752 45555556666666666 99999999999999988887
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 831 Vk------------------------------------------------------------------------------ 832 (1177)
T KOG1025|consen 831 VK------------------------------------------------------------------------------ 832 (1177)
T ss_pred ec------------------------------------------------------------------------------
Confidence 65
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecccc--cc---ccccceeeCceeeecCCCCCccceeeeeeeeEeecc
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHH--ST---IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYL 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~--~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~t 309 (351)
....+|++|||+++...... .. ..-.+.|||=|.+....|+.++||||+||++||++|
T Consensus 833 -----------------sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmT 895 (1177)
T KOG1025|consen 833 -----------------SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT 895 (1177)
T ss_pred -----------------CCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence 23578999999987643222 11 222467899999999999999999999999999997
Q ss_pred -ccccccccCCCce
Q psy2006 310 -GITLMARKTKTKY 322 (351)
Q Consensus 310 -G~~pf~~~~~~~~ 322 (351)
|..|+.+...+++
T Consensus 896 FGa~Py~gi~~~eI 909 (1177)
T KOG1025|consen 896 FGAKPYDGIPAEEI 909 (1177)
T ss_pred cCCCccCCCCHHHh
Confidence 9999999887775
No 395
>KOG3653|consensus
Probab=99.89 E-value=3.3e-24 Score=197.96 Aligned_cols=189 Identities=19% Similarity=0.188 Sum_probs=147.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC----eEEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG----HMCIA 76 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~----~~~lV 76 (351)
++.||+|.||.||+|. .+++.||||++.. ...+.+..|-+|.+...-.|+| |++.+.+-.... .++||
T Consensus 215 ~eli~~Grfg~V~Kaq--L~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m~h~n----Il~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQ--LDNRLVAVKIFPE--QEKQSFQNEKNIYSLPGMKHEN----ILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred HHHhhcCccceeehhh--ccCceeEEEecCH--HHHHHHHhHHHHHhccCccchh----HHHhhchhccCCccccceeEE
Confidence 3679999999999999 6789999999985 3356777888888775544444 999888776555 89999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc---------cccccc
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK---------KKREVR 146 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~---------~~i~h~ 146 (351)
+||. .|||.++++..- .+.....+++..++.| |+|||+ ..|.||
T Consensus 287 t~fh~kGsL~dyL~~nt---isw~~~cria~SmarG-----------------------La~LHee~p~~d~~Kp~IaHR 340 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKANT---ISWNSLCRIAESMARG-----------------------LAHLHEELPRGDHHKPPIAHR 340 (534)
T ss_pred eeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHH-----------------------HHHhcccCCcCCCCCCccccc
Confidence 9999 999999999974 5666777777777776 999997 348899
Q ss_pred ccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 147 RVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 147 d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
|+|..||.+-
T Consensus 341 DlkSkNVLvK---------------------------------------------------------------------- 350 (534)
T KOG3653|consen 341 DLKSKNVLVK---------------------------------------------------------------------- 350 (534)
T ss_pred cccccceEEc----------------------------------------------------------------------
Confidence 9999998765
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceec-----cccccccccceeeCceeeecC-CCC-----Ccc
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDD-----EHHSTIVSTRHYRAPEVILEL-GWA-----QPC 295 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~-----~~~ 295 (351)
....+.|+|||++.... ......+||..|||||++.+. ++. .+.
T Consensus 351 -------------------------~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~ 405 (534)
T KOG3653|consen 351 -------------------------NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRI 405 (534)
T ss_pred -------------------------cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHH
Confidence 23457899999986522 122337899999999999764 333 346
Q ss_pred ceeeeeeeeEeeccccccccccC
Q psy2006 296 DVWSIGCIIFELYLGITLMARKT 318 (351)
Q Consensus 296 DiwslG~~l~~l~tG~~pf~~~~ 318 (351)
||||+|.++||+++.-..+....
T Consensus 406 DvYamgLVLWEi~SRC~~~~~~~ 428 (534)
T KOG3653|consen 406 DVYAMGLVLWEIASRCTDADPGP 428 (534)
T ss_pred HHHHHHHHHHHHHhhcccccCCC
Confidence 99999999999998776665433
No 396
>KOG1027|consensus
Probab=99.89 E-value=9.7e-24 Score=206.20 Aligned_cols=196 Identities=19% Similarity=0.199 Sum_probs=151.8
Q ss_pred cccCcccce-EEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccC
Q psy2006 3 SLNCVASNH-VCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81 (351)
Q Consensus 3 ~iG~G~~g~-V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g 81 (351)
.+|.|+.|+ ||+|. ..+|.||||.+.. .....+.+||+.|+.-. .|+| ||+.+..=.++.++||+.|.|.
T Consensus 516 ilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~--e~~~~A~rEi~lL~eSD-~H~N----viRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 516 ILGYGSNGTVVFRGV--YEGREVAVKRLLE--EFFDFAQREIQLLQESD-EHPN----VIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred HcccCCCCcEEEEEe--eCCceehHHHHhh--HhHHHHHHHHHHHHhcc-CCCc----eEEEEeeccCCceEEEEehHhh
Confidence 478888886 67999 8899999999974 34567889999998864 3444 9999999888899999999999
Q ss_pred CCHHHHHHhc-CCCCCch-HHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 82 LSVFDFLKEN-NYLPYSL-DQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 82 ~sL~~~l~~~-~~~~~~~-~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
.+|.+++... ....... -.++.++.|++. ||++||+-+++|||+||.||.|+
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~-----------------------GlaHLHsl~iVHRDLkPQNILI~--- 640 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIAS-----------------------GLAHLHSLKIVHRDLKPQNILIS--- 640 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHH-----------------------HHHHHHhcccccccCCCceEEEE---
Confidence 9999999884 1111111 223444444444 59999999999999999999987
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
...
T Consensus 641 --------~~~--------------------------------------------------------------------- 643 (903)
T KOG1027|consen 641 --------VPS--------------------------------------------------------------------- 643 (903)
T ss_pred --------ccC---------------------------------------------------------------------
Confidence 000
Q ss_pred hccchhhhhhhccccceeeeccCCcceecc------ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc-cc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDE------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG-IT 312 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG-~~ 312 (351)
....-.++|+|||+|+.... ..+...||.+|.|||++....-..++||+|+||++|+.++| ..
T Consensus 644 ----------~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~H 713 (903)
T KOG1027|consen 644 ----------ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSH 713 (903)
T ss_pred ----------CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCcc
Confidence 00134689999999986322 24567899999999999888778899999999999999985 99
Q ss_pred cccccCCC
Q psy2006 313 LMARKTKT 320 (351)
Q Consensus 313 pf~~~~~~ 320 (351)
||-..-..
T Consensus 714 pFGd~~~R 721 (903)
T KOG1027|consen 714 PFGDSLER 721 (903)
T ss_pred CCCchHHh
Confidence 99665444
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.89 E-value=1.4e-23 Score=185.71 Aligned_cols=184 Identities=30% Similarity=0.451 Sum_probs=156.6
Q ss_pred ccceEEEEEEeecCcEEEEEEecchhhh--hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-CCCH
Q psy2006 8 ASNHVCTNVVYEVDSVVALKIIKNVEKY--REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-GLSV 84 (351)
Q Consensus 8 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL 84 (351)
+||.||+|.+..+++.+|+|++...... .+.+.+|+++++.++|++ |+++++.+......++|+|++ +++|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~------i~~~~~~~~~~~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPN------IVRLYDVFEDEDKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCc------HHHHHhheeeCCEEEEEEeCCCCCCH
Confidence 5899999999888999999999764321 467889999999998777 999999999999999999999 6699
Q ss_pred HHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccC
Q psy2006 85 FDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFD 164 (351)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~ 164 (351)
.+++..... ++...+..++.+++.+ +.+||+.+++|+|+++.|+.+.+
T Consensus 75 ~~~~~~~~~--~~~~~~~~~~~~l~~~-----------------------l~~lh~~~i~h~~i~~~ni~~~~------- 122 (244)
T smart00220 75 FDLLKKRGR--LSEDEARFYARQILSA-----------------------LEYLHSNGIIHRDLKPENILLDE------- 122 (244)
T ss_pred HHHHHhccC--CCHHHHHHHHHHHHHH-----------------------HHHHHHcCeecCCcCHHHeEECC-------
Confidence 999887642 6777777777777777 99999999999999999998762
Q ss_pred CCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccch
Q psy2006 165 DEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVS 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
T Consensus 123 -------------------------------------------------------------------------------- 122 (244)
T smart00220 123 -------------------------------------------------------------------------------- 122 (244)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhccccceeeeccCCcceecc--ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 245 SLVMRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 245 ~~~~~~~~~~~vkl~dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
...++++|||.+..... ......++..|++||...+..++.++|+|++|++++++++|..||...
T Consensus 123 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 123 --------DGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred --------CCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 34689999999876443 334566788999999998888888999999999999999999999773
No 398
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.89 E-value=2.3e-23 Score=202.88 Aligned_cols=215 Identities=13% Similarity=0.152 Sum_probs=143.3
Q ss_pred ccccCcccceEEEEEEe----------------ecCcEEEEEEecchhh-h--------------hHHHHHHHHHHHHhC
Q psy2006 2 CSLNCVASNHVCTNVVY----------------EVDSVVALKIIKNVEK-Y--------------REAARLEINALQKIG 50 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~----------------~~~~~vAiK~~~~~~~-~--------------~~~~~~E~~~l~~l~ 50 (351)
++||+|+||+||+|.+. ..++.||||.+..... . .+....|+.++.++.
T Consensus 151 ~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~ 230 (507)
T PLN03224 151 DKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIK 230 (507)
T ss_pred eEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhh
Confidence 67999999999999742 3457899999864321 1 122345777777776
Q ss_pred CCCCCCCcceeeeeeeEee--------CCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHH---HHHhhhcCCCC
Q psy2006 51 EKDPNGRHLCVKMLDWFDY--------HGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQ---LIYAKENNYLP 118 (351)
Q Consensus 51 h~~~~g~~~Iv~l~~~f~~--------~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~q---l~~~~~~~~~~ 118 (351)
|.+ ..+.+++.++++|.. .+..|||+||+ +++|.++++.... .++... ..++.. +... .....
T Consensus 231 ~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~-~~~~~L-~e~l~~g~~l~~~--~~~~~ 305 (507)
T PLN03224 231 RNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLG-PFPGCL-EEFMMAGKKIPDN--MPQDK 305 (507)
T ss_pred ccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccC-CCcchH-HHHHhcCCchhhh--ccccc
Confidence 522 233346777777764 34789999999 8999999986421 222111 111000 0000 00113
Q ss_pred CchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHH
Q psy2006 119 YSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLI 198 (351)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i 198 (351)
.++..+..++.|++.+|.|+|+++++|||+|+.|+.+.
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~------------------------------------------ 343 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT------------------------------------------ 343 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC------------------------------------------
Confidence 45667777888888889999999999999999999876
Q ss_pred HHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc--ccc--cc
Q psy2006 199 SKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--HHS--TI 274 (351)
Q Consensus 199 ~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--~~~--~~ 274 (351)
....++|+|||++..... ... ..
T Consensus 344 -----------------------------------------------------~~~~~kL~DFGla~~~~~~~~~~~~~g 370 (507)
T PLN03224 344 -----------------------------------------------------VDGQVKIIDFGAAVDMCTGINFNPLYG 370 (507)
T ss_pred -----------------------------------------------------CCCcEEEEeCcCccccccCCccCcccc
Confidence 124689999998854221 111 23
Q ss_pred cccceeeCceeeecCC--------------------C--CCccceeeeeeeeEeeccccc-cccc
Q psy2006 275 VSTRHYRAPEVILELG--------------------W--AQPCDVWSIGCIIFELYLGIT-LMAR 316 (351)
Q Consensus 275 ~gt~~y~aPE~~~~~~--------------------~--~~~~DiwslG~~l~~l~tG~~-pf~~ 316 (351)
.+++.|+|||.+.... + ..+.|+||+||++++|++|.. ||..
T Consensus 371 ~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 371 MLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred CCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 4478999999876432 1 234699999999999999875 7754
No 399
>KOG1345|consensus
Probab=99.89 E-value=9.1e-24 Score=182.85 Aligned_cols=199 Identities=14% Similarity=0.145 Sum_probs=158.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeee-eEeeCCeEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLD-WFDYHGHMCIAFEIL 80 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~-~f~~~~~~~lV~E~~ 80 (351)
+.||+|.||.+-+|.++.++..+++|.+.+.......+.+|..-=-.|++ |. ||+.-|+ .|+..+.++++|||+
T Consensus 30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~-H~----hIi~tY~vaFqt~d~YvF~qE~a 104 (378)
T KOG1345|consen 30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSP-HQ----HIIDTYEVAFQTSDAYVFVQEFA 104 (378)
T ss_pred HHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeecc-ch----hhhHHHHHHhhcCceEEEeeccC
Confidence 46899999999999999999999999998766556677777765555542 22 3886665 578888999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecC
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFG 159 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg 159 (351)
-|||.+-+...+ +-|...+.++.|++.| ++|+|+++++|||+|.+||.+-|=
T Consensus 105 P~gdL~snv~~~G---igE~~~K~v~~ql~SA-----------------------i~fMHsknlVHRdlK~eNiLif~~- 157 (378)
T KOG1345|consen 105 PRGDLRSNVEAAG---IGEANTKKVFAQLLSA-----------------------IEFMHSKNLVHRDLKAENILIFDA- 157 (378)
T ss_pred ccchhhhhcCccc---ccHHHHHHHHHHHHHH-----------------------HHHhhccchhhcccccceEEEecC-
Confidence 899998877643 6677778888888777 999999999999999999988730
Q ss_pred CcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhh
Q psy2006 160 SATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239 (351)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T Consensus 158 -------------------------------------------------------------------------------- 157 (378)
T KOG1345|consen 158 -------------------------------------------------------------------------------- 157 (378)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecC-----CCCCccceeeeeeeeEeeccccccc
Q psy2006 240 LSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL-----GWAQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~~l~~l~tG~~pf 314 (351)
.-..|||+|||..+..+......-.+..|.+||+.... ...+..|+|.||+++|..+||.+||
T Consensus 158 ------------df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 158 ------------DFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred ------------CccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 12369999999988766655555566778888876532 3478899999999999999999999
Q ss_pred cccCCCceee
Q psy2006 315 ARKTKTKYFY 324 (351)
Q Consensus 315 ~~~~~~~~~~ 324 (351)
.....++.-+
T Consensus 226 Qka~~~d~~Y 235 (378)
T KOG1345|consen 226 QKASIMDKPY 235 (378)
T ss_pred hhhhccCchH
Confidence 8766555543
No 400
>KOG2052|consensus
Probab=99.88 E-value=4.1e-23 Score=189.48 Aligned_cols=189 Identities=15% Similarity=0.180 Sum_probs=143.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHH--hCCCCCCCCcceeeeeeeEeeCC----eEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQK--IGEKDPNGRHLCVKMLDWFDYHG----HMCI 75 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~--l~h~~~~g~~~Iv~l~~~f~~~~----~~~l 75 (351)
+.||+|.||.||+|. +-|+.||||++.. .+.++..+|..|.+. |+|.| |...+..=..++ .+||
T Consensus 217 e~IGkGRyGEVwrG~--wrGe~VAVKiF~s--rdE~SWfrEtEIYqTvmLRHEN------ILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGR--WRGEDVAVKIFSS--RDERSWFRETEIYQTVMLRHEN------ILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred EEecCccccceeecc--ccCCceEEEEecc--cchhhhhhHHHHHHHHHhccch------hhhhhhccccCCCceEEEEE
Confidence 579999999999999 6799999999985 334566777777765 66766 888776655443 8999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc--------ccccc
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK--------KREVR 146 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~--------~i~h~ 146 (351)
|.+|. .|||+|++.+.- +..+...+++..++.| |.+||-. .|.||
T Consensus 287 vTdYHe~GSL~DyL~r~t---v~~~~ml~LalS~AsG-----------------------LaHLH~eI~GTqgKPaIAHR 340 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRNT---VTTEGMLKLALSIASG-----------------------LAHLHMEIVGTQGKPAIAHR 340 (513)
T ss_pred eeecccCCcHHHHHhhcc---CCHHHHHHHHHHHhhh-----------------------HHHHHHHHhcCCCCchhhcc
Confidence 99999 999999999953 5555566666666655 9999952 27899
Q ss_pred ccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 147 RVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 147 d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
|+|..||.+-
T Consensus 341 DlKSKNILVK---------------------------------------------------------------------- 350 (513)
T KOG2052|consen 341 DLKSKNILVK---------------------------------------------------------------------- 350 (513)
T ss_pred ccccccEEEc----------------------------------------------------------------------
Confidence 9999998775
Q ss_pred hhhhcccchhhhhhccchhhhhhhccccceeeeccCCccee-------ccccccccccceeeCceeeecC----CC-C-C
Q psy2006 227 SVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD-------DEHHSTIVSTRHYRAPEVILEL----GW-A-Q 293 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~-------~~~~~~~~gt~~y~aPE~~~~~----~~-~-~ 293 (351)
....+-|+|+|++-.. +-..+..+||-.|||||++... .| + .
T Consensus 351 -------------------------kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk 405 (513)
T KOG2052|consen 351 -------------------------KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK 405 (513)
T ss_pred -------------------------cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence 2456788999988542 2244678999999999998643 22 3 3
Q ss_pred ccceeeeeeeeEeeccc----------cccccccCCCc
Q psy2006 294 PCDVWSIGCIIFELYLG----------ITLMARKTKTK 321 (351)
Q Consensus 294 ~~DiwslG~~l~~l~tG----------~~pf~~~~~~~ 321 (351)
.+||||||+++||++.. +.||++....+
T Consensus 406 ~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 406 RADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 48999999999999853 45776654443
No 401
>KOG0200|consensus
Probab=99.87 E-value=2.8e-22 Score=201.14 Aligned_cols=204 Identities=19% Similarity=0.294 Sum_probs=157.2
Q ss_pred ccccCcccceEEEEEEee-------cCcEEEEEEecchh--hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCC
Q psy2006 2 CSLNCVASNHVCTNVVYE-------VDSVVALKIIKNVE--KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
+.||+|+||.||+|.-.. ....||+|.++... ...+.+..|+++|+.+. |+| |+.+++++...+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~n------iv~llG~~t~~~ 375 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPN------IVNLLGACTQDG 375 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcc------hhhheeeeccCC
Confidence 369999999999998542 15689999997542 44567889999999997 444 999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHhcC---CCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENN---YLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~---~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
.+++|+||| .|+|.++++..+ ....+. ...+....++..++-.+..|++.|++||.++.++|||
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~------------~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD 443 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSG------------VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD 443 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccC------------CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence 999999999 999999999876 100000 0000002356666777777777779999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+..-||.+.
T Consensus 444 LAaRNVLi~----------------------------------------------------------------------- 452 (609)
T KOG0200|consen 444 LAARNVLIT----------------------------------------------------------------------- 452 (609)
T ss_pred hhhhhEEec-----------------------------------------------------------------------
Confidence 999998887
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccc-cc---cccc--cceeeCceeeecCCCCCccceeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEH-HS---TIVS--TRHYRAPEVILELGWAQPCDVWSIG 301 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~-~~---~~~g--t~~y~aPE~~~~~~~~~~~DiwslG 301 (351)
....+||+|||+++..... .. ...+ ...|||||.+....|+.++|+||+|
T Consensus 453 ------------------------~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfG 508 (609)
T KOG0200|consen 453 ------------------------KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFG 508 (609)
T ss_pred ------------------------CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHH
Confidence 2346899999999752221 11 1222 2459999999999999999999999
Q ss_pred eeeEeecc-ccccccccC
Q psy2006 302 CIIFELYL-GITLMARKT 318 (351)
Q Consensus 302 ~~l~~l~t-G~~pf~~~~ 318 (351)
+++||+.| |..|+.+-.
T Consensus 509 I~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 509 ILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred HHHHHHhhCCCCCCCCCC
Confidence 99999996 999998743
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=1.4e-21 Score=168.47 Aligned_cols=180 Identities=29% Similarity=0.412 Sum_probs=151.7
Q ss_pred ccCcccceEEEEEEeecCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-
Q psy2006 4 LNCVASNHVCTNVVYEVDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80 (351)
Q Consensus 4 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~- 80 (351)
||.|++|.||++.+..+++.+++|++..... ..+.+.+|+++++.+.|++ |+++++++......++|+|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~------i~~~~~~~~~~~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPN------IVKLYGVFEDENHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCC------eeeEeeeeecCCeEEEEEecCC
Confidence 7999999999999877899999999986533 2467889999999999866 999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
+++|.+++.... ..++...+..++.+++.+ +.++|+.|++|+|+++.|+.+.+
T Consensus 75 ~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-----------------------l~~lh~~~~~H~dl~~~ni~~~~--- 127 (215)
T cd00180 75 GGSLKDLLKENE-GKLSEDEILRILLQILEG-----------------------LEYLHSNGIIHRDLKPENILLDS--- 127 (215)
T ss_pred CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHhhEEEeC---
Confidence 699999988763 246777788888888777 99999999999999999998871
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
T Consensus 128 -------------------------------------------------------------------------------- 127 (215)
T cd00180 128 -------------------------------------------------------------------------------- 127 (215)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhccccceeeeccCCcceeccc---cccccccceeeCceeeecC-CCCCccceeeeeeeeEee
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFEL 307 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l 307 (351)
....++|+||+.+...... .....+...|++||.+... ..+.++|+|++|++++++
T Consensus 128 -----------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 128 -----------DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred -----------CCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 0246899999988764433 3445677889999998776 678899999999999998
No 403
>KOG1163|consensus
Probab=99.86 E-value=7.7e-22 Score=168.37 Aligned_cols=196 Identities=13% Similarity=0.151 Sum_probs=157.1
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||+|+||.+|.|....+|+.||||+-++. .......-|.++.+.|++-. | |..+..++....+.++||+.+
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~--G---iP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGV--G---IPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCC--C---Cchhhhhccccccceeeeecc
Confidence 47999999999999999999999999998753 33456778999999997533 2 888999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCC
Q psy2006 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGS 160 (351)
Q Consensus 81 g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~ 160 (351)
|.||.++..-+. ..++-..+..++.|++.- ++|+|.++.+||||||+|..++
T Consensus 94 GPsLEdLfnfC~-R~ftmkTvLMLaDQml~R-----------------------iEyvH~r~fiHRDIKPdNFLMG---- 145 (341)
T KOG1163|consen 94 GPSLEDLFNFCS-RRFTMKTVLMLADQMLSR-----------------------IEYVHLRNFIHRDIKPDNFLMG---- 145 (341)
T ss_pred CccHHHHHHHHh-hhhhHHhHHHHHHHHHHH-----------------------HHHHHhhccccccCCccceeec----
Confidence 999999887664 456777777777777766 9999999999999999997665
Q ss_pred cccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhh
Q psy2006 161 ATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRIL 240 (351)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
..
T Consensus 146 -------lg----------------------------------------------------------------------- 147 (341)
T KOG1163|consen 146 -------LG----------------------------------------------------------------------- 147 (341)
T ss_pred -------cc-----------------------------------------------------------------------
Confidence 00
Q ss_pred ccchhhhhhhccccceeeeccCCccee----------ccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccc
Q psy2006 241 SSVSSLVMRRVRRCDIRLIDFGSATFD----------DEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~vkl~dfg~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG 310 (351)
.-...+-++|||++... -.......||..|.+--...+..-+...|+-|+|.++..+..|
T Consensus 148 ----------rh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG 217 (341)
T KOG1163|consen 148 ----------RHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRG 217 (341)
T ss_pred ----------cccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecC
Confidence 01235778888887541 1122457889999877666666678899999999999999999
Q ss_pred cccccccC
Q psy2006 311 ITLMARKT 318 (351)
Q Consensus 311 ~~pf~~~~ 318 (351)
..||.+-.
T Consensus 218 ~LPWQglk 225 (341)
T KOG1163|consen 218 SLPWQGLK 225 (341)
T ss_pred CCcccccc
Confidence 99998854
No 404
>KOG1164|consensus
Probab=99.86 E-value=9.4e-22 Score=183.33 Aligned_cols=203 Identities=20% Similarity=0.140 Sum_probs=163.5
Q ss_pred ccccCcccceEEEEEEeecC-cEEEEEEecchh-hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeE-eeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVD-SVVALKIIKNVE-KYREAARLEINALQKIGEKDPNGRHLCVKMLDWF-DYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~-~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f-~~~~~~~lV~E 78 (351)
++||+|+||.||+|.+..++ +.+|+|+..... .....+..|+.+|..+.. .++..++..+++.+ ...+..||||+
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCceeEEEEe
Confidence 68999999999999987664 689999987642 222267789999999974 22333499999999 57789999999
Q ss_pred ccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeec
Q psy2006 79 ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDF 158 (351)
Q Consensus 79 ~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Df 158 (351)
.+|.||.++........++...+..++.|++.+ |+++|+.|++|||+||+|+.++.-
T Consensus 102 l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~-----------------------l~~lH~~G~iHRDiKp~N~~~g~~ 158 (322)
T KOG1164|consen 102 LLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNA-----------------------LEDLHSKGFIHRDIKPENFVVGQS 158 (322)
T ss_pred ccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHH-----------------------HHHHHhcCcccCCcCHHHeeecCC
Confidence 999999999877766678888899999988888 999999999999999999988710
Q ss_pred CCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhh
Q psy2006 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238 (351)
Q Consensus 159 g~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
+
T Consensus 159 ~------------------------------------------------------------------------------- 159 (322)
T KOG1164|consen 159 S------------------------------------------------------------------------------- 159 (322)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhccchhhhhhhccccceeeeccCCcc--ee---c----c-c---cccccccceeeCceeeecCCCCCccceeeeeeeeE
Q psy2006 239 ILSSVSSLVMRRVRRCDIRLIDFGSAT--FD---D----E-H---HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~vkl~dfg~~~--~~---~----~-~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 305 (351)
......+.+.|||+++ .. . . . .....||..|.++.+..+...+.+.|+||++.++.
T Consensus 160 -----------~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~ 228 (322)
T KOG1164|consen 160 -----------RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLL 228 (322)
T ss_pred -----------CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHH
Confidence 0012468999999997 21 1 0 1 12345999999999999999999999999999999
Q ss_pred eeccccccccccCC
Q psy2006 306 ELYLGITLMARKTK 319 (351)
Q Consensus 306 ~l~tG~~pf~~~~~ 319 (351)
++..|..||.+...
T Consensus 229 el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 229 ELLKGSLPWEALEM 242 (322)
T ss_pred HHhcCCCCCccccc
Confidence 99999999966553
No 405
>KOG1165|consensus
Probab=99.85 E-value=2.3e-21 Score=172.29 Aligned_cols=196 Identities=15% Similarity=0.136 Sum_probs=163.2
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEeccC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g 81 (351)
++||+|+||..|.|.+..++++||||.-... +.......|-+..+.|.. .+. |.+++-+-....|..||+|.+|
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQLrdEYr~YKlL~g-~~G----IP~vYYFGqeG~~NiLVidLLG 107 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQLRDEYRTYKLLGG-TEG----IPQVYYFGQEGKYNILVIDLLG 107 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-CCcchHHHHHHHHHHHcC-CCC----CCceeeeccccchhhhhhhhhC
Confidence 6899999999999999999999999998642 334567789999999973 222 8888877777779999999999
Q ss_pred CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCc
Q psy2006 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSA 161 (351)
Q Consensus 82 ~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s 161 (351)
.||.|+..-++ +.|+...|..++.|++.- ++++|++..+.||+||+|..|+-
T Consensus 108 PSLEDLFD~Cg-R~FSvKTV~miA~Qmi~r-----------------------ie~vH~k~LIYRDIKPdNFLIGr---- 159 (449)
T KOG1165|consen 108 PSLEDLFDLCG-RRFSVKTVAMIAKQMITR-----------------------IEYVHEKDLIYRDIKPDNFLIGR---- 159 (449)
T ss_pred cCHHHHHHHhc-CcccHHhHHHHHHHHHHH-----------------------HHHHHhcceeecccCccceeecC----
Confidence 99999998886 578888888888877777 99999999999999999998871
Q ss_pred ccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhc
Q psy2006 162 TFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
|+-
T Consensus 160 ------------------------------------------------p~~----------------------------- 162 (449)
T KOG1165|consen 160 ------------------------------------------------PGT----------------------------- 162 (449)
T ss_pred ------------------------------------------------CCC-----------------------------
Confidence 000
Q ss_pred cchhhhhhhccccceeeeccCCcceecc----------ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccc
Q psy2006 242 SVSSLVMRRVRRCDIRLIDFGSATFDDE----------HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311 (351)
Q Consensus 242 ~~~~~~~~~~~~~~vkl~dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~ 311 (351)
.....+.++|||++...-. ..-+..||..||+--..+++.-+...|+=|+|-++++.+.|.
T Consensus 163 ---------k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGs 233 (449)
T KOG1165|consen 163 ---------KDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 233 (449)
T ss_pred ---------CCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCC
Confidence 1245688999999975221 223578999999999999999999999999999999999999
Q ss_pred cccccc
Q psy2006 312 TLMARK 317 (351)
Q Consensus 312 ~pf~~~ 317 (351)
.||.|-
T Consensus 234 LPWQGL 239 (449)
T KOG1165|consen 234 LPWQGL 239 (449)
T ss_pred Cccccc
Confidence 999875
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=3.3e-20 Score=173.72 Aligned_cols=113 Identities=12% Similarity=-0.012 Sum_probs=86.0
Q ss_pred ccccCcccceEEEEEEee-cCcEEEEEEecch------hhhhHHHHHHHHHHHHhCCCCCCCCccee-eeeeeEeeCCeE
Q psy2006 2 CSLNCVASNHVCTNVVYE-VDSVVALKIIKNV------EKYREAARLEINALQKIGEKDPNGRHLCV-KMLDWFDYHGHM 73 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv-~l~~~f~~~~~~ 73 (351)
+.||+|+||+||+|.++. +++.||||++... ......+.+|+++|+.++|++ |+ .+++. ++.
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~------iv~~l~~~----~~~ 93 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIG------VVPQLLAT----GKD 93 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCC------CCcEEEEc----CCc
Confidence 579999999999999876 6788899987532 223456889999999999877 76 45542 568
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc-CCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV-RRC 151 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~-k~~ 151 (351)
||||||+ |++|.. +.. .. ...++.|++.+ |.|||++|++|||+ ||+
T Consensus 94 ~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~a-----------------------L~~lH~~gIiHrDL~KP~ 141 (365)
T PRK09188 94 GLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRA-----------------------LRDLHRAGITHNDLAKPQ 141 (365)
T ss_pred EEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHH-----------------------HHHHHHCCCeeCCCCCcc
Confidence 9999999 778863 211 01 13455555555 99999999999999 999
Q ss_pred CeEEe
Q psy2006 152 DIRLI 156 (351)
Q Consensus 152 ni~l~ 156 (351)
|+.+.
T Consensus 142 NILv~ 146 (365)
T PRK09188 142 NWLMG 146 (365)
T ss_pred eEEEc
Confidence 98775
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.82 E-value=2.4e-21 Score=200.99 Aligned_cols=150 Identities=16% Similarity=0.187 Sum_probs=114.9
Q ss_pred eeeeeeeEe-------eCCeEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHH
Q psy2006 60 CVKMLDWFD-------YHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132 (351)
Q Consensus 60 Iv~l~~~f~-------~~~~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~ 132 (351)
|+.++|+|. ..+.++.+||+++++|++++.... ..+++..++.++.||+.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~a--------------------- 92 (793)
T PLN00181 35 VRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEI--------------------- 92 (793)
T ss_pred HHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHH---------------------
Confidence 888888883 334788889999999999997542 357788888888888877
Q ss_pred hhhhccccccccccccCCCCeEEe--------ecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhcc
Q psy2006 133 YAVDYNNKKKREVRRVRRCDIRLI--------DFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEY 204 (351)
Q Consensus 133 ~~l~~lH~~~i~h~d~k~~ni~l~--------Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~ 204 (351)
|+|||++||+|||+||.||+|. |||++.....
T Consensus 93 --l~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~-------------------------------------- 132 (793)
T PLN00181 93 --VNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-------------------------------------- 132 (793)
T ss_pred --HHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc--------------------------------------
Confidence 9999999999999999998774 4554422110
Q ss_pred CCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc---------------
Q psy2006 205 EPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE--------------- 269 (351)
Q Consensus 205 ~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~--------------- 269 (351)
.....+|++|||+++....
T Consensus 133 ----------------------------------------------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~ 166 (793)
T PLN00181 133 ----------------------------------------------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQ 166 (793)
T ss_pred ----------------------------------------------cccCcccccccccccccccccccchhhhhccccC
Confidence 0124578899998753110
Q ss_pred ----ccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccccc
Q psy2006 270 ----HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317 (351)
Q Consensus 270 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~ 317 (351)
......||+.|+|||++.+..++.++|||||||++|||++|.+||...
T Consensus 167 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~ 218 (793)
T PLN00181 167 PFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK 218 (793)
T ss_pred CCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH
Confidence 011246889999999999999999999999999999999999988643
No 408
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=9.8e-19 Score=150.47 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=95.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh---h------------------------hHHHHHHHHHHHHhCCCCC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK---Y------------------------REAARLEINALQKIGEKDP 54 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~------------------------~~~~~~E~~~l~~l~h~~~ 54 (351)
+.||+|+||+||+|.+. +|+.||+|+++.... . ......|+++|.++.+.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~- 80 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG- 80 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 67999999999999986 899999999975311 0 112345999999997655
Q ss_pred CCCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHh
Q psy2006 55 NGRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIY 133 (351)
Q Consensus 55 ~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (351)
|...... ....+ +|||||+ |+++...+... .++++..+..++.|++.+
T Consensus 81 -----v~~p~~~-~~~~~-~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~---------------------- 129 (190)
T cd05147 81 -----IPCPEPI-LLKSH-VLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQI---------------------- 129 (190)
T ss_pred -----CCCCcEE-EecCC-EEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHH----------------------
Confidence 3222211 22223 8999999 55554443222 357777888888888887
Q ss_pred hhhcc-ccccccccccCCCCe-------EEeecCCcccCCC
Q psy2006 134 AVDYN-NKKKREVRRVRRCDI-------RLIDFGSATFDDE 166 (351)
Q Consensus 134 ~l~~l-H~~~i~h~d~k~~ni-------~l~Dfg~s~~~~~ 166 (351)
|.++ |+.|++|||+||+|+ +|+|||+|...+.
T Consensus 130 -L~~l~H~~giiHrDlkP~NIli~~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 130 -MRILYQDCRLVHADLSEYNLLYHDGKLYIIDVSQSVEHDH 169 (190)
T ss_pred -HHHHHHhCCcccCCCCHHHEEEECCcEEEEEccccccCCC
Confidence 9999 799999999999885 8899999865433
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.77 E-value=1.3e-18 Score=159.31 Aligned_cols=191 Identities=28% Similarity=0.357 Sum_probs=156.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhh----hhHHHHHHHHHHHHhCCC-CCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK----YREAARLEINALQKIGEK-DPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~h~-~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.|+||.||++.+. ..+|+|.+..... ....+.+|+.++..+.|. + |+.+++.+......+++
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------i~~~~~~~~~~~~~~~~ 76 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPN------IVKLYDFFQDEGSLYLV 76 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcc------eeeEEEEEecCCEEEEE
Confidence 57999999999999976 8899999976432 356788999999999876 4 99999999888889999
Q ss_pred Eecc-CCCHHHHHHhcCC-CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 77 FEIL-GLSVFDFLKENNY-LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~-~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
++++ ++++.+++..... ..+++..+..++.|++.+ +.++|+.+++|||+|+.|+.
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------l~~~H~~~~~hrd~kp~nil 133 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA-----------------------LEYLHSKGIIHRDIKPENIL 133 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHH-----------------------HHHHHhCCeeccCCCHHHee
Confidence 9999 8899977666532 146667777777777766 99999999999999999988
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+..
T Consensus 134 ~~~----------------------------------------------------------------------------- 136 (384)
T COG0515 134 LDR----------------------------------------------------------------------------- 136 (384)
T ss_pred ecC-----------------------------------------------------------------------------
Confidence 761
Q ss_pred hhhhhhccchhhhhhhcccc-ceeeeccCCcceecc---------ccccccccceeeCceeeec---CCCCCccceeeee
Q psy2006 235 QADRILSSVSSLVMRRVRRC-DIRLIDFGSATFDDE---------HHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIG 301 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~vkl~dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG 301 (351)
.. .++++|||.+..... ......|+..|++||.+.+ ...+...|+|++|
T Consensus 137 ------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g 198 (384)
T COG0515 137 ------------------DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG 198 (384)
T ss_pred ------------------CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHH
Confidence 12 588999998764222 2356789999999999987 4678899999999
Q ss_pred eeeEeeccccccccccCC
Q psy2006 302 CIIFELYLGITLMARKTK 319 (351)
Q Consensus 302 ~~l~~l~tG~~pf~~~~~ 319 (351)
++++++++|..||.....
T Consensus 199 ~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 199 ITLYELLTGLPPFEGEKN 216 (384)
T ss_pred HHHHHHHhCCCCCCCCCc
Confidence 999999999999877764
No 410
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=1.1e-17 Score=144.22 Aligned_cols=122 Identities=11% Similarity=-0.009 Sum_probs=87.9
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhh---------------------------hHHHHHHHHHHHHhCCCC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY---------------------------REAARLEINALQKIGEKD 53 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~~ 53 (351)
.+.||+|+||.||+|.+. +|+.||||+++..... ......|.+.+.++.+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 368999999999999986 8999999999753110 112357899999998766
Q ss_pred CCCCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHH
Q psy2006 54 PNGRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132 (351)
Q Consensus 54 ~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~ 132 (351)
|.....+... ..||||||+ |+++....... .++++..+..++.|++.+
T Consensus 81 ------i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~--------------------- 129 (190)
T cd05145 81 ------VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQ--------------------- 129 (190)
T ss_pred ------CCCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHH---------------------
Confidence 4332222222 248999999 54443332222 346777778888888877
Q ss_pred hhhhcccc-ccccccccCCCCeEEe
Q psy2006 133 YAVDYNNK-KKREVRRVRRCDIRLI 156 (351)
Q Consensus 133 ~~l~~lH~-~~i~h~d~k~~ni~l~ 156 (351)
+.++|+ .|++|||+||+|+.+.
T Consensus 130 --l~~lH~~~givHrDlkP~NIll~ 152 (190)
T cd05145 130 --MRRLYQEAGLVHGDLSEYNILYH 152 (190)
T ss_pred --HHHHHHhCCEecCCCChhhEEEE
Confidence 999999 9999999999997543
No 411
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.75 E-value=3.7e-18 Score=149.40 Aligned_cols=115 Identities=10% Similarity=0.075 Sum_probs=87.6
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhH----H------HHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYRE----A------ARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 70 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~----~------~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~ 70 (351)
++.||.|+||.||++.+ +++.+|+|++.......+ . ..+|++.+.++.|++ |..+.+++...
T Consensus 36 ~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~G------I~~~~d~~~~~ 107 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEG------LASLNDFYLLA 107 (232)
T ss_pred EEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCC------CCcceEeeeec
Confidence 36799999999999654 577899999974321111 2 578999999998887 88888887654
Q ss_pred --------CeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 71 --------GHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 71 --------~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
+..+|||||+ |.+|.++.. +++ ....++..+ +..+|+.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~-----------------------l~~lH~~ 154 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKAS-----------------------IESLHQH 154 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHH-----------------------HHHHHHc
Confidence 3689999999 778877621 222 223355555 9999999
Q ss_pred cccccccCCCCeEEe
Q psy2006 142 KREVRRVRRCDIRLI 156 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~ 156 (351)
|++|+|++|+|+.+.
T Consensus 155 gi~H~Dikp~Nili~ 169 (232)
T PRK10359 155 GMVSGDPHKGNFIVS 169 (232)
T ss_pred CCccCCCChHHEEEe
Confidence 999999999999876
No 412
>KOG0590|consensus
Probab=99.73 E-value=2.5e-18 Score=171.08 Aligned_cols=195 Identities=20% Similarity=0.213 Sum_probs=147.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEec----ch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIK----NV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~----~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
+.+|.|+||.|+.+......+.++.|.+. .. ..+...+..|.-+-..|.|++ ++..++.+.......
T Consensus 324 ~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~------~~e~l~~~~~~~~~~ 397 (601)
T KOG0590|consen 324 RVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPN------IIETLDIVQEIDGIL 397 (601)
T ss_pred ceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCc------hhhhHHHHhhcccch
Confidence 46899999999888877777777777654 21 122233566777777888777 777776666555444
Q ss_pred EEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 75 lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
-+||||..+|+.++.+.. . +.-.++-.+++|++.|++|+|+.|+.|||+|+.|+.
T Consensus 398 ~~mE~~~~Dlf~~~~~~~--~-----------------------~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll 452 (601)
T KOG0590|consen 398 QSMEYCPYDLFSLVMSNG--K-----------------------LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLL 452 (601)
T ss_pred hhhhcccHHHHHHHhccc--c-----------------------cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEE
Confidence 449999559999998863 2 334445555556666699999999999999999998
Q ss_pred EeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccc
Q psy2006 155 LIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234 (351)
Q Consensus 155 l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~ 234 (351)
+.
T Consensus 453 ~~------------------------------------------------------------------------------ 454 (601)
T KOG0590|consen 453 VT------------------------------------------------------------------------------ 454 (601)
T ss_pred Ee------------------------------------------------------------------------------
Confidence 87
Q ss_pred hhhhhhccchhhhhhhccccceeeeccCCcceecc-------ccccccccceeeCceeeecCCC-CCccceeeeeeeeEe
Q psy2006 235 QADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-------HHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFE 306 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~~l~~ 306 (351)
..+.+||+|||.+..... .....+|+..|+|||.+.+..| ....||||+|+++..
T Consensus 455 -----------------~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~ 517 (601)
T KOG0590|consen 455 -----------------ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYIC 517 (601)
T ss_pred -----------------cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEE
Confidence 345799999998865222 2245788999999999999998 566799999999999
Q ss_pred eccccccccccCCCce
Q psy2006 307 LYLGITLMARKTKTKY 322 (351)
Q Consensus 307 l~tG~~pf~~~~~~~~ 322 (351)
|++|+.||.-....+.
T Consensus 518 m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 518 MILGRFPWKVAKKSDN 533 (601)
T ss_pred EecCCCcccccccccc
Confidence 9999999988776655
No 413
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=6.1e-17 Score=139.07 Aligned_cols=112 Identities=10% Similarity=0.043 Sum_probs=83.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhh-----HHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYR-----EAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-----~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
..|++|+||+|+.+. ..++.++.+.+....... ..+.+|+++|++|.|. ++ |++++++ +..+++
T Consensus 8 ~~l~~~~f~~v~~~~--~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~-~~----vP~ll~~----~~~~lv 76 (218)
T PRK12274 8 EPLKSDTFGRILLVR--GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL-PR----TPRLLHW----DGRHLD 76 (218)
T ss_pred eeecCCCcceEEEee--cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC-CC----CCEEEEE----cCEEEE
Confidence 468999999999877 588899988887654322 2578899999999652 22 8888886 456999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccccccccc-CCCCeE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRV-RRCDIR 154 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~-k~~ni~ 154 (351)
|||+ |.+|.+.+.. . ...++.|++.+ |.++|+.|++|||+ |+.|+.
T Consensus 77 meyI~G~~L~~~~~~--------~-~~~~~~qi~~~-----------------------L~~lH~~GIvHrDL~kp~NIL 124 (218)
T PRK12274 77 RSYLAGAAMYQRPPR--------G-DLAYFRAARRL-----------------------LQQLHRCGVAHNDLAKEANWL 124 (218)
T ss_pred EeeecCccHHhhhhh--------h-hHHHHHHHHHH-----------------------HHHHHHCcCccCCCCCcceEE
Confidence 9999 7788653211 1 12344555555 99999999999999 788876
Q ss_pred Ee
Q psy2006 155 LI 156 (351)
Q Consensus 155 l~ 156 (351)
+.
T Consensus 125 v~ 126 (218)
T PRK12274 125 VQ 126 (218)
T ss_pred Ec
Confidence 64
No 414
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=3.3e-16 Score=136.38 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=93.4
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch-hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC---e-EEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV-EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG---H-MCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~---~-~~lV 76 (351)
++||+|+||.||. +..+... +||++... ....+.+.+|+++++.+.|.+. .+.||++++++++++. . +.+|
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~-~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLI-DWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCC-CCcccceeeEEEEeCCCCeEEEEEE
Confidence 5799999999996 5566655 69998753 2234678999999999965111 1333999999999874 4 4489
Q ss_pred EeccC---CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhh-hccccccccccccCCCC
Q psy2006 77 FEILG---LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAV-DYNNKKKREVRRVRRCD 152 (351)
Q Consensus 77 ~E~~g---~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~lH~~~i~h~d~k~~n 152 (351)
|||+| ++|.+++++. .+++. ..++.|++.+ + +|||+.+|+|||+||.|
T Consensus 84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~-----------------------l~~yLh~~~IvhrDlKp~N 135 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKK-----------------------LKRYLLDNRIVTMELKPQN 135 (210)
T ss_pred ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHH-----------------------HHHHHHHCCEeecCCCHHH
Confidence 99954 8999999764 24554 2446666655 6 99999999999999999
Q ss_pred eEEe
Q psy2006 153 IRLI 156 (351)
Q Consensus 153 i~l~ 156 (351)
|.+.
T Consensus 136 ILl~ 139 (210)
T PRK10345 136 ILCQ 139 (210)
T ss_pred EEEe
Confidence 9886
No 415
>KOG1024|consensus
Probab=99.68 E-value=7.4e-18 Score=152.91 Aligned_cols=197 Identities=14% Similarity=0.058 Sum_probs=141.7
Q ss_pred cccCcccceEEEEEEee-----cCcEEEEEEecch--hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC-eEE
Q psy2006 3 SLNCVASNHVCTNVVYE-----VDSVVALKIIKNV--EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG-HMC 74 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~-~~~ 74 (351)
.+-+|.||.||+|++++ +.+.|-+|.++.. +.....+..|.-.+..+.|+| +.++.+...... .-+
T Consensus 291 llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~n------ll~V~~V~ie~~~~P~ 364 (563)
T KOG1024|consen 291 LLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPN------LLSVLGVSIEDYATPF 364 (563)
T ss_pred hhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCC------ccceeEEEeeccCcce
Confidence 35689999999998775 3345666666542 233445667777777777777 999998887665 667
Q ss_pred EEEecc-CCCHHHHHHhcCCC------CCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccc
Q psy2006 75 IAFEIL-GLSVFDFLKENNYL------PYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRR 147 (351)
Q Consensus 75 lV~E~~-g~sL~~~l~~~~~~------~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 147 (351)
.++.++ -|+|..++..++.. .+...+...++. |+..|++|||++|++|.|
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas-----------------------Qla~am~hlh~~~ViHkD 421 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS-----------------------QLAMAMEHLHNHGVIHKD 421 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH-----------------------HHHHHHHHHHhcCcccch
Confidence 777888 68999999865421 122233444444 445559999999999999
Q ss_pred cCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 148 VRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 148 ~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
+..-|..+.|
T Consensus 422 iAaRNCvIdd---------------------------------------------------------------------- 431 (563)
T KOG1024|consen 422 IAARNCVIDD---------------------------------------------------------------------- 431 (563)
T ss_pred hhhhcceehh----------------------------------------------------------------------
Confidence 9988877663
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccc-----cceeeCceeeecCCCCCccceeeeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVS-----TRHYRAPEVILELGWAQPCDVWSIGC 302 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DiwslG~ 302 (351)
.-.|||+|-.+++-.=.....+.| ...||+||.+....|+.++|+||||+
T Consensus 432 -------------------------~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGV 486 (563)
T KOG1024|consen 432 -------------------------QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGV 486 (563)
T ss_pred -------------------------heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHH
Confidence 235788887776531111111122 35899999999999999999999999
Q ss_pred eeEeecc-ccccccccCCCcee
Q psy2006 303 IIFELYL-GITLMARKTKTKYF 323 (351)
Q Consensus 303 ~l~~l~t-G~~pf~~~~~~~~~ 323 (351)
++|||.| |+.|+..-+..|..
T Consensus 487 llWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 487 LLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred HHHHHHhcCCCCccccCHHHHH
Confidence 9999997 99999988876654
No 416
>KOG0606|consensus
Probab=99.68 E-value=3.7e-18 Score=171.32 Aligned_cols=63 Identities=32% Similarity=0.698 Sum_probs=57.7
Q ss_pred cccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCCCceee---ecccCCccccc
Q psy2006 273 TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFY---HGKLDWDEKGT 335 (351)
Q Consensus 273 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~~~~~---~~~~~~~~~~~ 335 (351)
..+|||.|.|||++...+|+..+|+|++|+++|+.+-|..||.++|.+++|- ..++.|++..+
T Consensus 217 qvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~de 282 (1205)
T KOG0606|consen 217 QVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDE 282 (1205)
T ss_pred cccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCc
Confidence 3589999999999999999999999999999999999999999999999974 67788988844
No 417
>KOG0603|consensus
Probab=99.66 E-value=6.2e-18 Score=162.07 Aligned_cols=184 Identities=24% Similarity=0.302 Sum_probs=147.5
Q ss_pred ccCcccceEEEEEEe---ecCcEEEEEEecchh---hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 4 LNCVASNHVCTNVVY---EVDSVVALKIIKNVE---KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 4 iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+|.|+||.|++++-. ..+.-+|+|+.++.. ..+.....|..++.... |+. ++.+...|+.+..++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f------~v~lhyafqt~~kl~l~ 75 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPF------LVKLHYAFQTDGKLYLI 75 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCc------eeeeeeeeccccchhHh
Confidence 799999999988632 367899999997642 12224456788888876 444 99999999999999999
Q ss_pred Eecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 77 ~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
+++. |++|+..+.... .+.+..++.+...++.+ ++++|+.++++||+|+.|+.+
T Consensus 76 ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLa-----------------------ld~lh~l~iiyrd~k~enill 130 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALA-----------------------LDHLHKLGIAYRDYKLENVLL 130 (612)
T ss_pred hhhcccchhhhccccCC--chHHHHHHHHHHHHHHH-----------------------HhhcchhHHHHhcccccceee
Confidence 9999 889998876654 45555566655555555 999999999999999999877
Q ss_pred eecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccch
Q psy2006 156 IDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235 (351)
Q Consensus 156 ~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~ 235 (351)
.
T Consensus 131 d------------------------------------------------------------------------------- 131 (612)
T KOG0603|consen 131 L------------------------------------------------------------------------------- 131 (612)
T ss_pred c-------------------------------------------------------------------------------
Confidence 5
Q ss_pred hhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeecccccccc
Q psy2006 236 ADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMA 315 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~ 315 (351)
..+.+++.|||.++..-..... +||..|||||++. +....+|+||+|++.++++||..||.
T Consensus 132 ----------------~~Ghi~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~ 192 (612)
T KOG0603|consen 132 ----------------LEGHIKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG 192 (612)
T ss_pred ----------------ccCccccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence 3578999999998753222212 8999999999997 67788999999999999999999998
Q ss_pred c
Q psy2006 316 R 316 (351)
Q Consensus 316 ~ 316 (351)
+
T Consensus 193 ~ 193 (612)
T KOG0603|consen 193 G 193 (612)
T ss_pred h
Confidence 8
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.66 E-value=3.7e-17 Score=138.63 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=50.4
Q ss_pred cceeeeccCCcceeccccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccccccccCC
Q psy2006 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTK 319 (351)
Q Consensus 254 ~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~ 319 (351)
..+++ ||++...... ...||+.|+|||++.+..++.++||||+||++|+++||..||.....
T Consensus 48 ~~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~ 109 (176)
T smart00750 48 GLLKL--DGSVAFKTPE--QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE 109 (176)
T ss_pred cceee--ccceEeeccc--cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence 34566 8887654332 23688999999999999999999999999999999999999976543
No 419
>smart00090 RIO RIO-like kinase.
Probab=99.63 E-value=2e-15 Score=134.39 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=86.7
Q ss_pred ccccCcccceEEEEE-EeecCcEEEEEEecchhh-------------------------hhHHHHHHHHHHHHhCCCCCC
Q psy2006 2 CSLNCVASNHVCTNV-VYEVDSVVALKIIKNVEK-------------------------YREAARLEINALQKIGEKDPN 55 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~-~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~h~~~~ 55 (351)
++||.|+||.||+|. +..+|+.||+|++..... ....+.+|+.+++++.+....
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~ 113 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP 113 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 579999999999999 667999999999974320 012346899999999742211
Q ss_pred CCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhh
Q psy2006 56 GRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134 (351)
Q Consensus 56 g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (351)
+..+++ .. ..+|||||+ |.+|...+.... .+....+..++.|++.+
T Consensus 114 ----~p~~~~---~~-~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~----------------------- 160 (237)
T smart00090 114 ----VPKPIA---WR-RNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEE----------------------- 160 (237)
T ss_pred ----CCeeeE---ec-CceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHH-----------------------
Confidence 334443 22 348999999 556665442222 34455566777777777
Q ss_pred hhcccccc-ccccccCCCCeEE
Q psy2006 135 VDYNNKKK-REVRRVRRCDIRL 155 (351)
Q Consensus 135 l~~lH~~~-i~h~d~k~~ni~l 155 (351)
+.++|+.| ++|+|+||+|+.+
T Consensus 161 l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 161 MRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred HHHHHhcCCEEeCCCChhhEEE
Confidence 99999999 9999999999755
No 420
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.59 E-value=1.2e-14 Score=126.95 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=99.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchh---------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVE---------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
++.||+|++|.||+|.. .+..|++|+..... .......+|+.++..+.+.+ |.....++...+
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~p~~~~~~~~ 72 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAG------VNVPAVYFVDPE 72 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCC------CCCCeEEEEeCC
Confidence 57899999999999984 78889999865321 11235678999999998766 666566666777
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
..++||||+ |++|.+++.... . ....++.+++.+ |.++|+.+++|+|+++
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~-----------------------l~~lH~~~i~H~Dl~p 123 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRL-----------------------VGKLHSAGIIHGDLTT 123 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHH-----------------------HHHHHhCCcccCCCCc
Confidence 889999999 889999886542 1 556666666666 9999999999999999
Q ss_pred CCe-------EEeecCCccc
Q psy2006 151 CDI-------RLIDFGSATF 163 (351)
Q Consensus 151 ~ni-------~l~Dfg~s~~ 163 (351)
+|+ .++|||.+..
T Consensus 124 ~Nil~~~~~~~liDf~~a~~ 143 (211)
T PRK14879 124 SNMILSGGKIYLIDFGLAEF 143 (211)
T ss_pred ccEEEECCCEEEEECCcccC
Confidence 886 5689998865
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.58 E-value=1.9e-16 Score=142.73 Aligned_cols=202 Identities=14% Similarity=0.097 Sum_probs=123.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----hhhhHHHHHHHHHHHHhCC-CCCC---CCcceeeeeeeEeeCC--
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----EKYREAARLEINALQKIGE-KDPN---GRHLCVKMLDWFDYHG-- 71 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~h-~~~~---g~~~Iv~l~~~f~~~~-- 71 (351)
+.||.|+++.||.++|.++++.+|+|+.... ....+...+|.-....+.+ .+|. -+..++-.+|.....+
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~ 97 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP 97 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence 4699999999999999999999999999532 1223444444433333222 1111 0111444444444332
Q ss_pred ---------------eEEEEEeccCCCHHHHHHhc---CCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHh
Q psy2006 72 ---------------HMCIAFEILGLSVFDFLKEN---NYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIY 133 (351)
Q Consensus 72 ---------------~~~lV~E~~g~sL~~~l~~~---~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (351)
..+++|+-+.+||.+++..- .....+.. ......+..|++.
T Consensus 98 ~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~---------------------~~arl~lT~Q~I~ 156 (288)
T PF14531_consen 98 PFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLA---------------------FAARLSLTVQMIR 156 (288)
T ss_dssp SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHH---------------------HHHHHHHHHHHHH
T ss_pred cceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhH---------------------HHHHHHHHHHHHH
Confidence 45889999999998886532 21100110 1111233356666
Q ss_pred hhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChh
Q psy2006 134 AVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLS 213 (351)
Q Consensus 134 ~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~ 213 (351)
.+++||+.|++|+|+++.|+.+.
T Consensus 157 lvA~Lh~~GlVHgdi~~~nfll~--------------------------------------------------------- 179 (288)
T PF14531_consen 157 LVANLHSYGLVHGDIKPENFLLD--------------------------------------------------------- 179 (288)
T ss_dssp HHHHHHHTTEEEST-SGGGEEE----------------------------------------------------------
T ss_pred HHHHHhhcceEecccceeeEEEc---------------------------------------------------------
Confidence 69999999999999999999887
Q ss_pred hhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecC----
Q psy2006 214 EALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL---- 289 (351)
Q Consensus 214 e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~---- 289 (351)
..+.+.|+||+.....+........+..|.+||.....
T Consensus 180 --------------------------------------~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 180 --------------------------------------QDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp --------------------------------------TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCH
T ss_pred --------------------------------------CCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccC
Confidence 35789999998765544433333344678888866442
Q ss_pred ----CCCCccceeeeeeeeEeeccccccccccCC
Q psy2006 290 ----GWAQPCDVWSIGCIIFELYLGITLMARKTK 319 (351)
Q Consensus 290 ----~~~~~~DiwslG~~l~~l~tG~~pf~~~~~ 319 (351)
.++.+.|.|+||+++|.+++|..||...+.
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~ 255 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSP 255 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGG
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCc
Confidence 357788999999999999999999987643
No 422
>KOG1166|consensus
Probab=99.58 E-value=4.8e-16 Score=158.54 Aligned_cols=190 Identities=14% Similarity=0.159 Sum_probs=144.8
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhC---CCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIG---EKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~---h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
+.||+|+||+||+|.... ++.||+|+=+-..... +.-=.+++.+|+ .+. |..+.......+.-+||+|
T Consensus 704 ~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~~~~~------~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLKPQMLPS------IMHISSAHVFQNASVLVSE 774 (974)
T ss_pred eeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhchhhhcc------hHHHHHHHccCCcceeeee
Confidence 369999999999999866 9999999987532110 111123444443 012 7777777788888999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|. .|+|.+++...+ .+++..+--+..|++.- ++.||..+|||+||||+|.+|..
T Consensus 775 y~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~i-----------------------ve~lH~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 775 YSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRI-----------------------VEHLHAMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred ccccccHHHhhccCC--CCCchhhhHHHHHHHHH-----------------------HHHHHhcceecccCCcceeEeec
Confidence 99 999999998544 57777777777777777 99999999999999999998871
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
. ..+
T Consensus 830 -----------~-~~~---------------------------------------------------------------- 833 (974)
T KOG1166|consen 830 -----------E-ICA---------------------------------------------------------------- 833 (974)
T ss_pred -----------c-cCC----------------------------------------------------------------
Confidence 0 000
Q ss_pred hhhccchhhhhhhccccceeeeccCCcce----ecc-ccccccccceeeCceeeecCCCCCccceeeeeeeeEeeccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATF----DDE-HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGIT 312 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~----~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~ 312 (351)
+.....++|+|||.+.- .+. .....++|..+-++|...+++++..+|.+-++.+++.|+.|++
T Consensus 834 ------------~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 834 ------------DSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ------------CCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 00134689999998752 222 4456788899999999999999999999999999999999976
Q ss_pred c
Q psy2006 313 L 313 (351)
Q Consensus 313 p 313 (351)
-
T Consensus 902 ~ 902 (974)
T KOG1166|consen 902 M 902 (974)
T ss_pred H
Confidence 5
No 423
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.55 E-value=4e-14 Score=122.58 Aligned_cols=114 Identities=14% Similarity=0.027 Sum_probs=86.2
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchh---------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeE
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVE---------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHM 73 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~ 73 (351)
.||+|+||+||+|. .+++.|++|+..... ....++.+|+++++.+.+.+ +....-++...+..
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~p~~~~~~~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG------VNTPVVYDVDPDNK 72 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC------CCCCEEEEEECCCC
Confidence 48999999999998 678899999964321 11245678999999998765 33333344456677
Q ss_pred EEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCC
Q psy2006 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCD 152 (351)
Q Consensus 74 ~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~n 152 (351)
++||||+ |++|.+++..... .++.|++.+ +.++|+.|++|+|++++|
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~~---------~~~~~i~~~-----------------------l~~lH~~gi~H~Dl~~~N 120 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGND---------ELLREIGRL-----------------------VGKLHKAGIVHGDLTTSN 120 (199)
T ss_pred EEEEEEECCccHHHHHhhcHH---------HHHHHHHHH-----------------------HHHHHHCCeecCCCCcce
Confidence 9999999 8899988755320 556666666 999999999999999999
Q ss_pred eEEe
Q psy2006 153 IRLI 156 (351)
Q Consensus 153 i~l~ 156 (351)
+.+.
T Consensus 121 il~~ 124 (199)
T TIGR03724 121 IIVR 124 (199)
T ss_pred EEEE
Confidence 8664
No 424
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.53 E-value=5.4e-14 Score=121.85 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=83.0
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-----------------------hhhHHHHHHHHHHHHhCCCCCCCCc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-----------------------KYREAARLEINALQKIGEKDPNGRH 58 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------------------~~~~~~~~E~~~l~~l~h~~~~g~~ 58 (351)
++||.|+||.||+|.+ .+++.||||++.... .......+|..++..+.+.+..
T Consensus 21 ~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~--- 96 (198)
T cd05144 21 NQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP--- 96 (198)
T ss_pred CccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC---
Confidence 5799999999999987 489999999975421 0112356789999999765422
Q ss_pred ceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhc
Q psy2006 59 LCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137 (351)
Q Consensus 59 ~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 137 (351)
+...++. ...++||||+ |++|.+.... ..+..++.+++.+ +.+
T Consensus 97 -v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~-----------------------l~~ 140 (198)
T cd05144 97 -VPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEE-----------------------IVK 140 (198)
T ss_pred -CCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHH-----------------------HHH
Confidence 5555542 4558999999 7787654321 2344555666655 999
Q ss_pred cccccccccccCCCCeEEe
Q psy2006 138 NNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 138 lH~~~i~h~d~k~~ni~l~ 156 (351)
+|+.|++|+|++|+|+.+.
T Consensus 141 lh~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 141 AYKHGIIHGDLSEFNILVD 159 (198)
T ss_pred HHHCCCCcCCCCcccEEEc
Confidence 9999999999999997554
No 425
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.52 E-value=7.3e-14 Score=138.97 Aligned_cols=114 Identities=11% Similarity=-0.016 Sum_probs=87.3
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch----h-----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV----E-----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH 72 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~-----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~ 72 (351)
++||+|+||+||+|.+ .++.+++|+.... . ...+.+.+|+++++.+.|.+ |+....++.....
T Consensus 339 ~~iG~G~~g~Vy~~~~--~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~p~~~~~~~~~ 410 (535)
T PRK09605 339 HLIGKGAEADIKKGEY--LGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAG------VPTPVIYDVDPEE 410 (535)
T ss_pred ceeccCCcEEEEEEee--cCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccC------CCeeEEEEEeCCC
Confidence 5799999999999984 4444555543211 0 12345778999999998776 7776666666678
Q ss_pred EEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 73 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 73 ~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
.++||||+ |++|.+++. ....++.|++.+ +.++|+.+++|||+||.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~-----------------------L~~lH~~giiHrDlkp~ 457 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEI-----------------------VAKLHKAGIVHGDLTTS 457 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHH-----------------------HHHHHhCCCccCCCChH
Confidence 89999999 889998875 234566666666 99999999999999999
Q ss_pred CeEEe
Q psy2006 152 DIRLI 156 (351)
Q Consensus 152 ni~l~ 156 (351)
|+.+.
T Consensus 458 NILl~ 462 (535)
T PRK09605 458 NFIVR 462 (535)
T ss_pred HEEEE
Confidence 98874
No 426
>KOG0195|consensus
Probab=99.51 E-value=8.8e-16 Score=133.63 Aligned_cols=195 Identities=14% Similarity=0.168 Sum_probs=141.7
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
-||.+...|..|+|+ +.|..++.|+++.. ......+..|...|+.++|+| |..+++.+..+.++.++..
T Consensus 196 tkl~e~hsgelwrgr--wqgndivakil~vr~~t~risrdfneefp~lrifshpn------ilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 196 TKLAESHSGELWRGR--WQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPN------ILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhccCCCccccccc--ccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCc------hhhhhhhccCCCCceEeee
Confidence 367888999999999 56777888988653 233456778999999999888 9999999999999999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEee
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~D 157 (351)
|+ -|||+..++.....-....++.+++..++.| +.|||+-..+....
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiarg-----------------------maflhslep~ipr~--------- 315 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARG-----------------------MAFLHSLEPMIPRF--------- 315 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhh-----------------------HHHHhhcchhhhhh---------
Confidence 99 8999999999877777788888888888887 99999843221111
Q ss_pred cCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhh
Q psy2006 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237 (351)
Q Consensus 158 fg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 237 (351)
|+....++...+
T Consensus 316 -------------------~lns~hvmided------------------------------------------------- 327 (448)
T KOG0195|consen 316 -------------------YLNSKHVMIDED------------------------------------------------- 327 (448)
T ss_pred -------------------hcccceEEecch-------------------------------------------------
Confidence 111111111000
Q ss_pred hhhccchhhhhhhccccceeeeccCCcceeccccccccccceeeCceeeecCCC---CCccceeeeeeeeEeeccccccc
Q psy2006 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGW---AQPCDVWSIGCIIFELYLGITLM 314 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslG~~l~~l~tG~~pf 314 (351)
....+..+|..+++..... .-.|.||+||.+...+- -.++|+|||.+++||+.|.+.||
T Consensus 328 --------------ltarismad~kfsfqe~gr----~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 328 --------------LTARISMADTKFSFQEVGR----AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred --------------hhhheecccceeeeecccc----ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 0112333444343332222 23589999999987654 35689999999999999999999
Q ss_pred cccCCCce
Q psy2006 315 ARKTKTKY 322 (351)
Q Consensus 315 ~~~~~~~~ 322 (351)
...+.+|.
T Consensus 390 adlspmec 397 (448)
T KOG0195|consen 390 ADLSPMEC 397 (448)
T ss_pred ccCCchhh
Confidence 99887765
No 427
>KOG1240|consensus
Probab=99.49 E-value=1.4e-15 Score=153.34 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=96.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh-----hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEE
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE-----KYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV 76 (351)
+.||.+.|=+|.+|++. ...|++|++.+.. +...+...|++ ...++++| +..+.-+-..++..|||
T Consensus 29 ~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn------~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 29 ENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPN------CLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred cccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCc------ccchHHHHHhhHHHHHH
Confidence 56999999999999974 3449999997642 22344455666 55556666 88888777888899999
Q ss_pred EeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEe
Q psy2006 77 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLI 156 (351)
Q Consensus 77 ~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~ 156 (351)
-+|+..+|+|.+..+.+ +..-+.++++.|++.||.-||..||.|+|+|..||.+.
T Consensus 100 RqyvkhnLyDRlSTRPF-------------------------L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT 154 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLSTRPF-------------------------LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT 154 (1431)
T ss_pred HHHHhhhhhhhhccchH-------------------------HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe
Confidence 99999999999987753 33455677888888889999999999999999999887
No 428
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.45 E-value=3.9e-13 Score=115.15 Aligned_cols=129 Identities=16% Similarity=0.120 Sum_probs=84.6
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchhhh----hH---------------------HHHHHHHHHHHhCCCCCCC
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY----RE---------------------AARLEINALQKIGEKDPNG 56 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~---------------------~~~~E~~~l~~l~h~~~~g 56 (351)
+.||+|+||+||+|.+. +++.||||++...... .. ....|.+.+..+.+..-.
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~- 80 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP- 80 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC-
Confidence 57999999999999985 8999999998753210 01 113566677776543211
Q ss_pred CcceeeeeeeEeeCCeEEEEEecc-CCCHH-HHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhh
Q psy2006 57 RHLCVKMLDWFDYHGHMCIAFEIL-GLSVF-DFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134 (351)
Q Consensus 57 ~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~-~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (351)
+...+.. ...|+||||+ ++.+. ..+.... .. ..++.++.+++.+
T Consensus 81 ---~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~----------------------- 126 (187)
T cd05119 81 ---VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILEL----------------------- 126 (187)
T ss_pred ---CCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHH-----------------------
Confidence 4444433 2469999999 53322 1111111 01 4455666666666
Q ss_pred hhcccc-ccccccccCCCCe-------EEeecCCcccCCC
Q psy2006 135 VDYNNK-KKREVRRVRRCDI-------RLIDFGSATFDDE 166 (351)
Q Consensus 135 l~~lH~-~~i~h~d~k~~ni-------~l~Dfg~s~~~~~ 166 (351)
+.++|. .+++|+|++++|+ +++|||.|...+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVDDGKVYIIDVPQAVEIDH 166 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEECCcEEEEECcccccccC
Confidence 999999 9999999999886 6788998865433
No 429
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.39 E-value=4.6e-12 Score=112.94 Aligned_cols=118 Identities=14% Similarity=0.020 Sum_probs=86.3
Q ss_pred ccc-CcccceEEEEEEeecCcEEEEEEecch--------h------hhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeE
Q psy2006 3 SLN-CVASNHVCTNVVYEVDSVVALKIIKNV--------E------KYREAARLEINALQKIGEKDPNGRHLCVKMLDWF 67 (351)
Q Consensus 3 ~iG-~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~------~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f 67 (351)
.|| .|+.|+||.+.. .++.+++|.+... . .....+.+|++++.+|.+.+.+ ++..+++.
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~----vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLP----VPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCC----CceeEeee
Confidence 578 899999999984 5888999988531 0 1224577899999999887744 56777665
Q ss_pred eeCC----eEEEEEecc-C-CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 68 DYHG----HMCIAFEIL-G-LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 68 ~~~~----~~~lV~E~~-g-~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
.... ..++|||++ | .+|.+++... .+++.. +.|++.+ +.++|+.
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~-----------------------l~~lH~~ 161 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQL-----------------------IARFHDA 161 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHH-----------------------HHHHHHC
Confidence 4433 346999999 5 5898887653 234332 4455555 9999999
Q ss_pred cccccccCCCCeEEe
Q psy2006 142 KREVRRVRRCDIRLI 156 (351)
Q Consensus 142 ~i~h~d~k~~ni~l~ 156 (351)
|++|+|+|+.|+.+.
T Consensus 162 GI~HrDlkp~NILv~ 176 (239)
T PRK01723 162 GVYHADLNAHNILLD 176 (239)
T ss_pred CCCCCCCCchhEEEc
Confidence 999999999998765
No 430
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.38 E-value=3.7e-12 Score=104.14 Aligned_cols=117 Identities=19% Similarity=0.090 Sum_probs=90.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++||.|.++.||++.+ .++.+++|....... ...+..|+.+++.+.+.+.. +++++.++...+..+++|||+
T Consensus 3 ~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~----~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGT--KDEDYVLKINPSREK-GADREREVAILQLLARKGLP----VPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEe--cCCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCC----CCeEEEEcCCCCccEEEEEec
Confidence 46899999999999996 448899999976433 45678899999999864222 889999998888999999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccc---ccccccccCCCCeEEe
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK---KKREVRRVRRCDIRLI 156 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~d~k~~ni~l~ 156 (351)
|.++..+ +......++.++..+ +..+|. .+++|+|+++.|+.+.
T Consensus 76 ~g~~~~~~---------~~~~~~~~~~~~~~~-----------------------l~~lh~~~~~~i~H~Dl~~~Nil~~ 123 (155)
T cd05120 76 EGETLDEV---------SEEEKEDIAEQLAEL-----------------------LAKLHQLPLLVLCHGDLHPGNILVD 123 (155)
T ss_pred CCeecccC---------CHHHHHHHHHHHHHH-----------------------HHHHhCCCceEEEecCCCcceEEEE
Confidence 5555543 333445555566555 888887 4799999999998775
No 431
>KOG0590|consensus
Probab=99.36 E-value=1.9e-13 Score=136.39 Aligned_cols=199 Identities=17% Similarity=0.160 Sum_probs=147.4
Q ss_pred CccccCcccceEEEEEEee-cCcEEEEEEecchh---hhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYE-VDSVVALKIIKNVE---KYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
++.||.|+|+.|-...+.. ....+|+|.+.... ....+...|..+-+.+. |.| ++++++.....+..++
T Consensus 25 ~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n------~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 25 SRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSN------TVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccccccc------ccccCCccCCCccccc
Confidence 3568999999999888643 45677777776532 22334445777776666 444 9999999999999999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccc-cccccccccCCCCe
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN-KKKREVRRVRRCDI 153 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH-~~~i~h~d~k~~ni 153 (351)
+++|. |+++++.+........+...+. .++.|+..++.|+| ..++.|+|++|+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~-----------------------~~~~ql~s~l~~~H~~~~~~h~~ikP~n~ 155 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSAS-----------------------RYLPQLNSGLSYLHPENGVTHRDIKPSNS 155 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchh-----------------------hhhhhhccCccccCcccccccCCCCCccc
Confidence 99999 9999988732221134444444 44555555599999 99999999999976
Q ss_pred EEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhccc
Q psy2006 154 RLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233 (351)
Q Consensus 154 ~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~ 233 (351)
.+.
T Consensus 156 ~l~----------------------------------------------------------------------------- 158 (601)
T KOG0590|consen 156 LLD----------------------------------------------------------------------------- 158 (601)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 655
Q ss_pred chhhhhhccchhhhhhhcccc-ceeeeccCCcceecc------ccccccc-cceeeCceeeecCCC-CCccceeeeeeee
Q psy2006 234 TQADRILSSVSSLVMRRVRRC-DIRLIDFGSATFDDE------HHSTIVS-TRHYRAPEVILELGW-AQPCDVWSIGCII 304 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~vkl~dfg~~~~~~~------~~~~~~g-t~~y~aPE~~~~~~~-~~~~DiwslG~~l 304 (351)
.+. .+++.|||++..... .....+| ++.|+|||...+..+ .+..|+||+|+++
T Consensus 159 ------------------~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l 220 (601)
T KOG0590|consen 159 ------------------ESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVL 220 (601)
T ss_pred ------------------cCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccc
Confidence 122 678899998865222 2234677 999999999988655 7889999999999
Q ss_pred EeeccccccccccCCCcee
Q psy2006 305 FELYLGITLMARKTKTKYF 323 (351)
Q Consensus 305 ~~l~tG~~pf~~~~~~~~~ 323 (351)
..+++|..|+.-....+..
T Consensus 221 ~~~~~g~~p~~~~~~~~~~ 239 (601)
T KOG0590|consen 221 SAMLTGELPWDFPSRKDGR 239 (601)
T ss_pred cccccCCCCcccccccccc
Confidence 9999999999877655544
No 432
>KOG0661|consensus
Probab=99.31 E-value=4.4e-14 Score=131.45 Aligned_cols=101 Identities=33% Similarity=0.543 Sum_probs=85.5
Q ss_pred CCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCccee--ccccccccccceeeCceeeecCC-CCCccce
Q psy2006 221 FDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFD--DEHHSTIVSTRHYRAPEVILELG-WAQPCDV 297 (351)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~--~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di 297 (351)
++-+..-...|..+--|||++++|++.+. ...+||+|||+|+-. ..+-+..+-|.+|+|||++++.. |+.+.|+
T Consensus 117 ~QilqGL~hiHk~GfFHRDlKPENiLi~~---~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~ 193 (538)
T KOG0661|consen 117 YQILQGLAHIHKHGFFHRDLKPENILISG---NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDM 193 (538)
T ss_pred HHHHHHHHHHHhcCcccccCChhheEecc---cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHH
Confidence 33444555688899999999999999875 468999999999863 34556788899999999998754 6999999
Q ss_pred eeeeeeeEeeccccccccccCCCceee
Q psy2006 298 WSIGCIIFELYLGITLMARKTKTKYFY 324 (351)
Q Consensus 298 wslG~~l~~l~tG~~pf~~~~~~~~~~ 324 (351)
|++||+++|+.+-+++|.|.++.+.++
T Consensus 194 wA~GcI~aEl~sLrPLFPG~sE~Dqi~ 220 (538)
T KOG0661|consen 194 WAVGCIMAELYSLRPLFPGASEIDQIY 220 (538)
T ss_pred HHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence 999999999999999999999888765
No 433
>KOG1033|consensus
Probab=99.29 E-value=9.8e-14 Score=131.09 Aligned_cols=137 Identities=24% Similarity=0.327 Sum_probs=107.0
Q ss_pred eEEEEEecc-CCCHHHHHHhcCC-CCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNY-LPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~-~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
+++|.|+.| ..+|.++|.+... -.-+......++.|+..+ ++| ++.+|+|+|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~-----------------------~~y---k~~ihrdlk 383 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPA-----------------------VEY---KGLIHRDLK 383 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccc-----------------------hhh---ccchhhhcc
Confidence 799999999 8999999986532 234455566666666666 999 999999999
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
+.||...|
T Consensus 384 p~nif~~~------------------------------------------------------------------------ 391 (516)
T KOG1033|consen 384 PSNIFFSD------------------------------------------------------------------------ 391 (516)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 99987662
Q ss_pred hcccchhhhhhccchhhhhhhccccceeeeccCCcceecc---------ccccccccceeeCceeeecCCCCCccceeee
Q psy2006 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE---------HHSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
...+||.|||+...... ..+..+||.+||+||.+.+..|+.++|||+|
T Consensus 392 -----------------------d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaL 448 (516)
T KOG1033|consen 392 -----------------------DDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYAL 448 (516)
T ss_pred -----------------------chhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhH
Confidence 34678888888654211 3356789999999999999999999999999
Q ss_pred eeeeEeecc-ccccccccCCCceeeecccC
Q psy2006 301 GCIIFELYL-GITLMARKTKTKYFYHGKLD 329 (351)
Q Consensus 301 G~~l~~l~t-G~~pf~~~~~~~~~~~~~~~ 329 (351)
|++++|++. -...|.......-+.+|.+.
T Consensus 449 Glil~EL~~~f~T~~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 449 GLILAELLIQFSTQFERIATLTDIRDGIIP 478 (516)
T ss_pred HHHHHHHHHHhccHHHHHHhhhhhhcCCCC
Confidence 999999998 67777776666666665553
No 434
>KOG0601|consensus
Probab=99.27 E-value=6.4e-12 Score=120.80 Aligned_cols=279 Identities=15% Similarity=0.079 Sum_probs=197.8
Q ss_pred ccccC--cccceEEEEEE--eecCcEEEEEEecch---hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEE
Q psy2006 2 CSLNC--VASNHVCTNVV--YEVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74 (351)
Q Consensus 2 ~~iG~--G~~g~V~~~~~--~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~ 74 (351)
..+|. |.+|.||.+.. ..++..+|+|.-+.. ......-.+|+.....+. .+.+ .++-...|+..++++
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~-~~~~----~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID-SHEN----PVRDSPAWEGSGILF 194 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC-cccc----ccccCcccccCCcce
Confidence 35788 99999999998 899999999995432 122233345665555553 3433 888899999999999
Q ss_pred EEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHHH----hhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIY----AKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 75 lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
+-+|.|+.+|.++...-. .-+|...++....+... | |.++|+.+++|-|+++
T Consensus 195 iqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~a-----------------------l~~~hs~~~~~~~~kp 250 (524)
T KOG0601|consen 195 IQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTA-----------------------LSHLHSNNIVHDDLKP 250 (524)
T ss_pred eeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhccccc-----------------------ccccCCCcccccccch
Confidence 999999999999987764 24777777777777777 6 9999999999999997
Q ss_pred CC---------eEEeecCCcccC-CCCc-------ccccCCCCccCCccccCCC--------------------------
Q psy2006 151 CD---------IRLIDFGSATFD-DEHH-------STIVSTRHYRAPERYMASD-------------------------- 187 (351)
Q Consensus 151 ~n---------i~l~Dfg~s~~~-~~~~-------~~~~~~~~~~~pe~~~~~~-------------------------- 187 (351)
.| .++.|||+.... +... ...-|...|++||......
T Consensus 251 ~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g 330 (524)
T KOG0601|consen 251 ANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVG 330 (524)
T ss_pred hheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCC
Confidence 55 478889887542 2221 1124666799998432210
Q ss_pred --------------h----hhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhh
Q psy2006 188 --------------D----EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMR 249 (351)
Q Consensus 188 --------------~----~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
. ..+..+...+..|+..++-.|+++++++++++.. ....+|.++++.|+....
T Consensus 331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~---------s~~~~~~d~~psni~i~~ 401 (524)
T KOG0601|consen 331 KNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH---------SKLFVHLDVKPSNILISN 401 (524)
T ss_pred CCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc---------chhhhcccccccceeecc
Confidence 0 1112334477888999999999999999988764 566677788888887765
Q ss_pred hccccceeeeccCCcceeccccccccccceee--CceeeecCCCCCccceeeeeeeeEeeccccccccccCCC
Q psy2006 250 RVRRCDIRLIDFGSATFDDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKT 320 (351)
Q Consensus 250 ~~~~~~vkl~dfg~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwslG~~l~~l~tG~~pf~~~~~~ 320 (351)
+. +..++.||+......-......+...+. ++.+....++..++|++|+|..+.+.++|...=...+..
T Consensus 402 ~~--~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~ 472 (524)
T KOG0601|consen 402 DG--FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS 472 (524)
T ss_pred ch--hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc
Confidence 42 6778888887653222222233344444 555656678899999999999999999986655444333
No 435
>KOG4158|consensus
Probab=99.23 E-value=8.6e-12 Score=114.23 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=109.6
Q ss_pred CcceeeeeeeEeeCC---------------------------eEEEEEeccCCCHHHHHHhcCCCCCchHHHHHHHHHHH
Q psy2006 57 RHLCVKMLDWFDYHG---------------------------HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLI 109 (351)
Q Consensus 57 ~~~Iv~l~~~f~~~~---------------------------~~~lV~E~~g~sL~~~l~~~~~~~~~~~~~~~~~~ql~ 109 (351)
|.|||.++.+|.++- .+|+||.-...+|++++.... .+....+.++.|++
T Consensus 275 HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 275 HPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQLL 351 (598)
T ss_pred CCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHHH
Confidence 344999999997552 699999999999999997753 45666777778888
Q ss_pred HhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChh
Q psy2006 110 YAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDE 189 (351)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~ 189 (351)
++ +.|||.+||.|||+|.+||.+- ..
T Consensus 352 Ea-----------------------v~hL~~hgvAhRDlKSDNiL~E-----------ld-------------------- 377 (598)
T KOG4158|consen 352 EA-----------------------VTHLHKHGVAHRDLKSDNILLE-----------LD-------------------- 377 (598)
T ss_pred HH-----------------------HHHHHHccchhhcccccceEEE-----------ec--------------------
Confidence 77 9999999999999999999876 00
Q ss_pred hHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc
Q psy2006 190 EHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE 269 (351)
Q Consensus 190 ~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~ 269 (351)
++.-..+.++|||.|.-...
T Consensus 378 ------------------------------------------------------------dD~~P~LVvaDFGCcLAd~~ 397 (598)
T KOG4158|consen 378 ------------------------------------------------------------DDEIPQLVVADFGCCLADDN 397 (598)
T ss_pred ------------------------------------------------------------CCCCcEEEEcccceeeeccc
Confidence 01235678999998743111
Q ss_pred ---------ccccccccceeeCceeeecCC--C----CCccceeeeeeeeEeeccccccccccC
Q psy2006 270 ---------HHSTIVSTRHYRAPEVILELG--W----AQPCDVWSIGCIIFELYLGITLMARKT 318 (351)
Q Consensus 270 ---------~~~~~~gt~~y~aPE~~~~~~--~----~~~~DiwslG~~l~~l~tG~~pf~~~~ 318 (351)
..-..-|.-.-||||+....+ . -.++|.|++|.+.||+.....||++..
T Consensus 398 hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG 461 (598)
T KOG4158|consen 398 HGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG 461 (598)
T ss_pred cccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence 111223455779999886543 1 357899999999999999999999843
No 436
>KOG0615|consensus
Probab=99.20 E-value=2.7e-11 Score=111.29 Aligned_cols=112 Identities=25% Similarity=0.395 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccc-cccCCCCeEEeecCCcccC--CCCcccccCCC
Q psy2006 99 DQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREV-RRVRRCDIRLIDFGSATFD--DEHHSTIVSTR 175 (351)
Q Consensus 99 ~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h-~d~k~~ni~l~Dfg~s~~~--~~~~~~~~~~~ 175 (351)
...+.++..+..-|.+|+.|.+...= +|+. -|-.+.-+|++|||+|+.. .....++||||
T Consensus 280 ~~f~Qll~avkYLH~~GI~HRDiKPe-----------------NILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTp 342 (475)
T KOG0615|consen 280 LLFKQLLTAVKYLHSQGIIHRDIKPE-----------------NILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTP 342 (475)
T ss_pred HHHHHHHHHHHHHHHcCcccccCCcc-----------------eEEeccCCcceEEEecccchhhccccceehhhhcCCc
Confidence 34566677777766666655553222 2222 1223455899999999875 55578899999
Q ss_pred CccCCccccCC----------------------------------------------------ChhhHHHHHHHHHHhhc
Q psy2006 176 HYRAPERYMAS----------------------------------------------------DDEEHRQLFDLISKMLE 203 (351)
Q Consensus 176 ~~~~pe~~~~~----------------------------------------------------~~~~~~~~~~~i~~~L~ 203 (351)
.|+|||.+... -...+++..++|..||.
T Consensus 343 sYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~ 422 (475)
T KOG0615|consen 343 SYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLV 422 (475)
T ss_pred cccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhE
Confidence 99999965321 01345778899999999
Q ss_pred cCCCCCCChhhhhcCCCCCCCCch
Q psy2006 204 YEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 204 ~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.||++|+|++|+|+||||+..+..
T Consensus 423 VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 423 VDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred eCcccCcCHHHHhcChhhhccccc
Confidence 999999999999999999877643
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.08 E-value=6.7e-10 Score=107.54 Aligned_cols=125 Identities=12% Similarity=0.067 Sum_probs=75.5
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecchh--hh---------------------------------hH------HHH
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKNVE--KY---------------------------------RE------AAR 40 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~---------------------------------~~------~~~ 40 (351)
++||.|++|.||+|+. .+|+.||||+....- .. .. .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 4699999999999997 589999999985320 00 00 123
Q ss_pred HHHHHHHHhCCCCCC-CCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCC
Q psy2006 41 LEINALQKIGEKDPN-GRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLP 118 (351)
Q Consensus 41 ~E~~~l~~l~h~~~~-g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~ 118 (351)
+|++.+.++.....+ ..-.|..++.. .....+|||||+ |.+|.++...... ..+ ...++.+++..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~------- 268 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWD--RTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARS------- 268 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehh--hcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHH-------
Confidence 466666666432111 11113344332 234579999999 8899887654311 111 22233333221
Q ss_pred CchHHHHHHhHhHHhhhhccccccccccccCCCCeEE
Q psy2006 119 YSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRL 155 (351)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l 155 (351)
.+..+|..|++|+|++|+|+.+
T Consensus 269 ---------------~l~ql~~~g~~H~D~hPgNilv 290 (437)
T TIGR01982 269 ---------------FLNQVLRDGFFHADLHPGNIFV 290 (437)
T ss_pred ---------------HHHHHHhCCceeCCCCcccEEE
Confidence 1456788999999999999744
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.08 E-value=2.1e-10 Score=112.66 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=27.1
Q ss_pred ccccCcccceEEEEEEeecCcEEEEEEecc
Q psy2006 2 CSLNCVASNHVCTNVVYEVDSVVALKIIKN 31 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~ 31 (351)
++||.|++|.||+|+.+.+|+.||||+...
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP 154 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRP 154 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence 479999999999999977799999999963
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.04 E-value=1e-09 Score=92.25 Aligned_cols=121 Identities=12% Similarity=0.006 Sum_probs=83.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~ 80 (351)
+++|+.|.++.||++.. .++.|++|+.............|+.+++.+.+... +.+++.... ..-++|||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~-----~P~~~~~~~--~~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGI-----GPKLYYFDP--ETGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC-----CCceEEEeC--CCCeEEEEec
Confidence 47899999999999984 58889999986543223345789999999975441 445555443 3457999999
Q ss_pred -CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccc-----cccccCCCCe-
Q psy2006 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKR-----EVRRVRRCDI- 153 (351)
Q Consensus 81 -g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i-----~h~d~k~~ni- 153 (351)
|.++.+. . ......+.++..+ +..||+.++ +|+|++++|+
T Consensus 74 ~G~~l~~~----~------~~~~~~~~~l~~~-----------------------l~~LH~~~~~~~~~~HgD~~~~Nil 120 (170)
T cd05151 74 EGSELLTE----D------FSDPENLEKIAKL-----------------------LKKLHSSPLPDLVPCHNDLLPGNFL 120 (170)
T ss_pred CCCccccc----c------ccCHHHHHHHHHH-----------------------HHHHhCCCCCCceeecCCCCcCcEE
Confidence 6666532 0 0112334455555 888998875 9999999996
Q ss_pred ------EEeecCCccc
Q psy2006 154 ------RLIDFGSATF 163 (351)
Q Consensus 154 ------~l~Dfg~s~~ 163 (351)
.++|||.+..
T Consensus 121 ~~~~~~~liDf~~a~~ 136 (170)
T cd05151 121 LDDGRLWLIDWEYAGM 136 (170)
T ss_pred EECCeEEEEecccccC
Confidence 4678887654
No 440
>KOG0660|consensus
Probab=99.02 E-value=2.1e-10 Score=103.96 Aligned_cols=78 Identities=37% Similarity=0.666 Sum_probs=61.7
Q ss_pred CCCeEEeecCCcccC-----CCCcccccCCCCccCCccccCC--------------------------------------
Q psy2006 150 RCDIRLIDFGSATFD-----DEHHSTIVSTRHYRAPERYMAS-------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~-----~~~~~~~~~~~~~~~pe~~~~~-------------------------------------- 186 (351)
++.+|++|||+|+.. ++..++...|.||+|||.....
T Consensus 161 ~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI 240 (359)
T KOG0660|consen 161 DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI 240 (359)
T ss_pred CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 455899999999886 4556888999999999943210
Q ss_pred --------------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 187 --------------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 187 --------------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.+..++.+++++.+||.+||.+|+|++|+|+|||+......
T Consensus 241 ~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp 319 (359)
T KOG0660|consen 241 LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP 319 (359)
T ss_pred HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence 11233668899999999999999999999999999765543
No 441
>KOG0599|consensus
Probab=98.99 E-value=2e-10 Score=100.58 Aligned_cols=75 Identities=36% Similarity=0.569 Sum_probs=60.8
Q ss_pred CCCCeEEeecCCccc--CCCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 149 RRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~--~~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.+.||+|+|||+|+. ..+..+..||||.|++||.+...
T Consensus 158 dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML 237 (411)
T KOG0599|consen 158 DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML 237 (411)
T ss_pred cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH
Confidence 356799999999976 45557789999999999954311
Q ss_pred -----------C---hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 187 -----------D---DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 187 -----------~---~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
. .+.+...+|+|+++|..||.+|.|+.|+|+||||.+
T Consensus 238 R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 238 RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 0 123466889999999999999999999999999954
No 442
>KOG0575|consensus
Probab=98.99 E-value=2.6e-10 Score=109.53 Aligned_cols=72 Identities=42% Similarity=0.578 Sum_probs=60.4
Q ss_pred CCeEEeecCCcccCC---CCcccccCCCCccCCccccCC-----------------------------------------
Q psy2006 151 CDIRLIDFGSATFDD---EHHSTIVSTRHYRAPERYMAS----------------------------------------- 186 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~---~~~~~~~~~~~~~~pe~~~~~----------------------------------------- 186 (351)
-|+||+|||+|.... +...+.||||.|.|||++...
T Consensus 155 ~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~ 234 (592)
T KOG0575|consen 155 MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE 234 (592)
T ss_pred CcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC
Confidence 479999999997633 667889999999999966532
Q ss_pred ---ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCC
Q psy2006 187 ---DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222 (351)
Q Consensus 187 ---~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~ 222 (351)
+...+.++.++|.+||..+|.+|||++++|.|+||.
T Consensus 235 Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 235 YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 223456788999999999999999999999999994
No 443
>KOG0581|consensus
Probab=98.98 E-value=2.8e-10 Score=103.57 Aligned_cols=77 Identities=30% Similarity=0.508 Sum_probs=63.4
Q ss_pred CCCeEEeecCCccc-CCCCcccccCCCCccCCccccCC------------------------------------------
Q psy2006 150 RCDIRLIDFGSATF-DDEHHSTIVSTRHYRAPERYMAS------------------------------------------ 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~-~~~~~~~~~~~~~~~~pe~~~~~------------------------------------------ 186 (351)
.++|||+|||.|.. .+....++.||..||+||.+.+.
T Consensus 215 kGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I 294 (364)
T KOG0581|consen 215 KGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI 294 (364)
T ss_pred CCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH
Confidence 57799999999977 45566889999999999955432
Q ss_pred --------Ch-hhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 187 --------DD-EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 187 --------~~-~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
+. .-++++.+||..||.+||.+|++++++|+|||+.....
T Consensus 295 v~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 295 VDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred hcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 11 13577999999999999999999999999999976553
No 444
>KOG0606|consensus
Probab=98.97 E-value=8.4e-11 Score=119.19 Aligned_cols=233 Identities=17% Similarity=0.201 Sum_probs=153.2
Q ss_pred cccCcccceEEEEEEeecCcEEEEEEecchhhh----hHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEe
Q psy2006 3 SLNCVASNHVCTNVVYEVDSVVALKIIKNVEKY----REAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78 (351)
Q Consensus 3 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E 78 (351)
.+-.|+++.++.+.-..++...++|+....... .+...++-+++-...++- +++-.-.|.-..-+.||++
T Consensus 811 p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~------v~~~~~s~~~rsP~~L~~~ 884 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPA------VVRSFPSFPCRSPLPLVGH 884 (1205)
T ss_pred cccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCc------eecccCCCCCCCCcchhhH
Confidence 466799999999997778888888888654322 222333333333222222 5544444666668999999
Q ss_pred cc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCe----
Q psy2006 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDI---- 153 (351)
Q Consensus 79 ~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni---- 153 (351)
|+ +++|...++..+ ......++.....+..+ +++||+..+.|+|.++.++
T Consensus 885 ~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs-----------------------~e~L~s~~r~h~~~~p~~~l~~~ 939 (1205)
T KOG0606|consen 885 YLNGGDLPSKLHNSG--CLSAEPARSPILERVQS-----------------------LESLHSSLRKHRDLKPDSLLIAY 939 (1205)
T ss_pred HhccCCchhhhhcCC--CcccccccchhHHHHhh-----------------------hhccccchhhcccccccchhhcc
Confidence 99 889999988875 44555566666655555 9999998899999997665
Q ss_pred ----EEeecCC-cccCCCCcc-cccCCCCccCCccccCCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 154 ----RLIDFGS-ATFDDEHHS-TIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 154 ----~l~Dfg~-s~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.+.|||+ ++..--... +..|.
T Consensus 940 ~gh~~l~~~~t~~~vg~~~p~~~~sg~----------------------------------------------------- 966 (1205)
T KOG0606|consen 940 DGHRPLTDFGTLSKVGLIPPTTDLSGP----------------------------------------------------- 966 (1205)
T ss_pred cCCcccCccccccccccccCcCCcccc-----------------------------------------------------
Confidence 4555552 211111000 00000
Q ss_pred hhhcccchhhhhhccchhhhhhhccccceeeeccCCcce-------eccccccccccceeeCceeeecCCCCCccceeee
Q psy2006 228 VRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATF-------DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSI 300 (351)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 300 (351)
...+..-.++.... .........||+.|.+||...+......+|+|++
T Consensus 967 -------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~ 1021 (1205)
T KOG0606|consen 967 -------------------------SSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSS 1021 (1205)
T ss_pred -------------------------cccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhh
Confidence 00000001111100 1122345788999999999999999999999999
Q ss_pred eeeeEeeccccccccccCCCceee---ecccCCcccccccccccccCccC
Q psy2006 301 GCIIFELYLGITLMARKTKTKYFY---HGKLDWDEKGTAGRYVRENCKPL 347 (351)
Q Consensus 301 G~~l~~l~tG~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 347 (351)
|+++++.++|.+||+..+.+++|. .+++.|..-+.+ .+.++.+|
T Consensus 1022 g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~---~s~~aq~~ 1068 (1205)
T KOG0606|consen 1022 GVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEE---GSYEAQDL 1068 (1205)
T ss_pred hhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccc---cChhhhhh
Confidence 999999999999999999999985 588888887774 44444443
No 445
>KOG1023|consensus
Probab=98.96 E-value=3.3e-10 Score=108.88 Aligned_cols=147 Identities=16% Similarity=0.236 Sum_probs=114.0
Q ss_pred HHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHH
Q psy2006 47 QKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125 (351)
Q Consensus 47 ~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~ 125 (351)
+.+.|.| +.++++....+.++++|.+|| -|+|+|.+.... ..++.-..-.+++.+..|
T Consensus 2 ~~l~h~n------~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~G-------------- 60 (484)
T KOG1023|consen 2 RQLDHDN------LNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKG-------------- 60 (484)
T ss_pred cccchhh------hhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHH--------------
Confidence 4566666 999999999999999999999 899999998743 456666666666666666
Q ss_pred HHhHhHHhhhhccccccc-cccccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCChhhHHHHHHHHHHhhcc
Q psy2006 126 HMSYQLIYAVDYNNKKKR-EVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEY 204 (351)
Q Consensus 126 ~~~~~~~~~l~~lH~~~i-~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~i~~~L~~ 204 (351)
+.|+|...+ .|+.++..|+.+.
T Consensus 61 ---------l~ylh~s~i~~hg~l~s~nClvd------------------------------------------------ 83 (484)
T KOG1023|consen 61 ---------LAYLHNSPIGYHGALKSSNCLVD------------------------------------------------ 83 (484)
T ss_pred ---------HHHHhcCcceeeeeeccccceee------------------------------------------------
Confidence 999998765 8999998887665
Q ss_pred CCCCCCChhhhhcCCCCCCCCchhhhcccchhhhhhccchhhhhhhccccceeeeccCCcceecc-----ccccccccce
Q psy2006 205 EPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDE-----HHSTIVSTRH 279 (351)
Q Consensus 205 ~p~~R~t~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkl~dfg~~~~~~~-----~~~~~~gt~~ 279 (351)
.+..+|++|||+...... ......-...
T Consensus 84 -----------------------------------------------~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l 116 (484)
T KOG1023|consen 84 -----------------------------------------------SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL 116 (484)
T ss_pred -----------------------------------------------eeEEEEechhhhcccccccccccccchhHHHHh
Confidence 467899999998765432 1111222357
Q ss_pred eeCceeeecCC-------CCCccceeeeeeeeEeeccccccccccC
Q psy2006 280 YRAPEVILELG-------WAQPCDVWSIGCIIFELYLGITLMARKT 318 (351)
Q Consensus 280 y~aPE~~~~~~-------~~~~~DiwslG~~l~~l~tG~~pf~~~~ 318 (351)
|.|||.+.... .+.++|+||+|++++|+++...||+...
T Consensus 117 w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~ 162 (484)
T KOG1023|consen 117 WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRN 162 (484)
T ss_pred ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccccc
Confidence 89999997631 3667999999999999999999998744
No 446
>KOG0671|consensus
Probab=98.94 E-value=1.1e-09 Score=99.98 Aligned_cols=80 Identities=64% Similarity=1.056 Sum_probs=68.0
Q ss_pred cccCCCCeEEeecCCcccCCCCcccccCCCCccCCccccCC---------------------------------------
Q psy2006 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS--------------------------------------- 186 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~--------------------------------------- 186 (351)
+-+|..+|+++|||-|+...+.++....|..|+|||.+++.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer 323 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER 323 (415)
T ss_pred ccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH
Confidence 45567789999999999999999999999999999965532
Q ss_pred ---------------------------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhh
Q psy2006 187 ---------------------------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEA 215 (351)
Q Consensus 187 ---------------------------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~ 215 (351)
.+.+..+++|++++||.+||.+|+|+.|+
T Consensus 324 IlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 324 ILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 11233468899999999999999999999
Q ss_pred hcCCCCCCCC
Q psy2006 216 LRHPFFDKLP 225 (351)
Q Consensus 216 l~~~~~~~~~ 225 (351)
|.||||+.+.
T Consensus 404 L~HpFF~~~~ 413 (415)
T KOG0671|consen 404 LSHPFFARLT 413 (415)
T ss_pred hcCHHhhcCC
Confidence 9999998765
No 447
>KOG0578|consensus
Probab=98.93 E-value=6.8e-10 Score=105.89 Aligned_cols=89 Identities=26% Similarity=0.355 Sum_probs=70.6
Q ss_pred hhccccccccccccCCCCeEEeecCCcccCCC---CcccccCCCCccCCccccCC-------------------------
Q psy2006 135 VDYNNKKKREVRRVRRCDIRLIDFGSATFDDE---HHSTIVSTRHYRAPERYMAS------------------------- 186 (351)
Q Consensus 135 l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~---~~~~~~~~~~~~~pe~~~~~------------------------- 186 (351)
+.+.+-+--.++.-+.+++||+|||+|..... ...+-.|||.|+|||++...
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPY 469 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPY 469 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCc
Confidence 44544466678888899999999999976322 35667899999999965431
Q ss_pred ----------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 187 ----------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 187 ----------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
.+..+..+.+|+.+||..|+.+|++|.|+|+||||+.
T Consensus 470 lnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 470 LNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred cCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 1234577899999999999999999999999999944
No 448
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.91 E-value=6.6e-09 Score=89.18 Aligned_cols=132 Identities=13% Similarity=0.168 Sum_probs=89.1
Q ss_pred ccccCcccceEEEEEEee------cCcEEEEEEecchh--------------h---------hhH----HHHHHHHHHHH
Q psy2006 2 CSLNCVASNHVCTNVVYE------VDSVVALKIIKNVE--------------K---------YRE----AARLEINALQK 48 (351)
Q Consensus 2 ~~iG~G~~g~V~~~~~~~------~~~~vAiK~~~~~~--------------~---------~~~----~~~~E~~~l~~ 48 (351)
..||.|-=+.||.|.... .+..+|+|+++... . ..+ .+.+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999998543 35899999996321 0 011 23489999999
Q ss_pred hCCCCCCCCcceeeeeeeEeeCCeEEEEEeccCCC-HHH-HHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHH
Q psy2006 49 IGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS-VFD-FLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRH 126 (351)
Q Consensus 49 l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~g~s-L~~-~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~ 126 (351)
+...+-+ |..++++ ..-+|||||++++ +.. .++.. .+++..+..+..+++.+
T Consensus 83 l~~~Gv~----vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~--------------- 136 (197)
T cd05146 83 MQKAGIP----CPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSM--------------- 136 (197)
T ss_pred HHHcCCC----CCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHH---------------
Confidence 9765544 7888865 4668999999653 221 12221 23334444555555555
Q ss_pred HhHhHHhhhhcc-ccccccccccCCCC-------eEEeecCCcccCCCC
Q psy2006 127 MSYQLIYAVDYN-NKKKREVRRVRRCD-------IRLIDFGSATFDDEH 167 (351)
Q Consensus 127 ~~~~~~~~l~~l-H~~~i~h~d~k~~n-------i~l~Dfg~s~~~~~~ 167 (351)
+..+ |..|++|+|+++.| +.++|||.|...+.+
T Consensus 137 --------l~~l~H~~glVHGDLs~~NIL~~~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 137 --------MKQLYKECNLVHADLSEYNMLWHDGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred --------HHHHHHhCCeecCCCCHHHEEEECCcEEEEECCCceeCCCC
Confidence 8887 89999999999655 588999988765443
No 449
>KOG0588|consensus
Probab=98.90 E-value=2.5e-09 Score=103.85 Aligned_cols=105 Identities=28% Similarity=0.459 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhcccccc---ccccccCCCCeEEeecCCcccC--CCCcccccCC
Q psy2006 100 QVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKK---REVRRVRRCDIRLIDFGSATFD--DEHHSTIVST 174 (351)
Q Consensus 100 ~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~d~k~~ni~l~Dfg~s~~~--~~~~~~~~~~ 174 (351)
..+.|+..+... +++..||..- -+..|. ..||||.|||+|..+ +.-..+.||+
T Consensus 117 ff~QIi~gv~yC---------------------H~~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe~~gklLeTSCGS 174 (786)
T KOG0588|consen 117 FFRQILDGVSYC---------------------HAFNICHRDLKPENLLLDV-KNNIKIADFGMASLEVPGKLLETSCGS 174 (786)
T ss_pred HHHHHHHHHHHH---------------------hhhcceeccCCchhhhhhc-ccCEeeeccceeecccCCccccccCCC
Confidence 356777777776 3466666522 223343 345999999999764 3446678999
Q ss_pred CCccCCccccCCC---------------------------------------------hhhHHHHHHHHHHhhccCCCCC
Q psy2006 175 RHYRAPERYMASD---------------------------------------------DEEHRQLFDLISKMLEYEPSER 209 (351)
Q Consensus 175 ~~~~~pe~~~~~~---------------------------------------------~~~~~~~~~~i~~~L~~~p~~R 209 (351)
|.|.+||.+.+.. ...+.++.+||++||..||.+|
T Consensus 175 PHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 175 PHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred cccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCcccc
Confidence 9999999876541 2334678899999999999999
Q ss_pred CChhhhhcCCCCCCCCc
Q psy2006 210 ISLSEALRHPFFDKLPS 226 (351)
Q Consensus 210 ~t~~e~l~~~~~~~~~~ 226 (351)
.|.++++.|||+...+.
T Consensus 255 iT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 255 ITTEEILKHPFLSGYTS 271 (786)
T ss_pred ccHHHHhhCchhhcCCC
Confidence 99999999999976443
No 450
>KOG0033|consensus
Probab=98.89 E-value=1.2e-09 Score=94.42 Aligned_cols=74 Identities=31% Similarity=0.463 Sum_probs=59.3
Q ss_pred CCCeEEeecCCcccCC--CCcccccCCCCccCCccccCCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPERYMASD---------------------------------------- 187 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~--~~~~~~~~~~~~~~pe~~~~~~---------------------------------------- 187 (351)
..-+||+|||+|.+.. ....++.|||.|++||.+...+
T Consensus 149 ~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 149 GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred CCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 3458999999997743 3356789999999999543220
Q ss_pred --------hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 188 --------DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 188 --------~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
+..++.+.+++++||..||.+|.|+.|.|+|||+.+
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 123477889999999999999999999999999965
No 451
>KOG3087|consensus
Probab=98.83 E-value=5.2e-08 Score=81.29 Aligned_cols=132 Identities=14% Similarity=0.018 Sum_probs=96.8
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---------hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---------EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
++.|-+|+=+.|+++. ..|+...||.=-.. .-...+..+|+++|.++.-.. |.-..-+|.+..
T Consensus 12 l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~G------I~~P~l~~~D~~ 83 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALG------IPAPRLIFIDTY 83 (229)
T ss_pred ceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhC------CCCceEEEEecC
Confidence 3567789999999999 78998888875321 123456678999999886544 555555677777
Q ss_pred eEEEEEeccCC--CHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccC
Q psy2006 72 HMCIAFEILGL--SVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVR 149 (351)
Q Consensus 72 ~~~lV~E~~g~--sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k 149 (351)
.-+|+|||..| ++.+++...............+++++-+. +.-||..+++|+|+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~-----------------------igklH~ndiiHGDLT 140 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGEL-----------------------IGKLHDNDIIHGDLT 140 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHH-----------------------HHHhhhCCeeccccc
Confidence 88899999966 89999887753322222225556655555 899999999999999
Q ss_pred CCCe-----------EEeecCCccc
Q psy2006 150 RCDI-----------RLIDFGSATF 163 (351)
Q Consensus 150 ~~ni-----------~l~Dfg~s~~ 163 (351)
.+|+ .++|||+|..
T Consensus 141 TSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 141 TSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred ccceEEecCCCcCceEEEeecchhc
Confidence 8885 6899999855
No 452
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.79 E-value=8.1e-08 Score=80.36 Aligned_cols=124 Identities=21% Similarity=0.118 Sum_probs=86.3
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecch---------hhhhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCC
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNV---------EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~ 71 (351)
+..|++|+=+.++.+. .-|..+.+|.=... .-..++..+|++++.++.... |....-++.+.+
T Consensus 1 ~~~i~~GAEa~i~~~~--~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~G------V~~P~v~dvD~~ 72 (204)
T COG3642 1 MDLIKQGAEAIIYLTD--FLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAG------VPVPIVYDVDPD 72 (204)
T ss_pred CchhhCCcceeEEeee--ccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEEcCC
Confidence 3568899999999995 45666666664321 123356678999999987555 444444555666
Q ss_pred eEEEEEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCC
Q psy2006 72 HMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR 150 (351)
Q Consensus 72 ~~~lV~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~ 150 (351)
...|+|||+ |..|.+.+.... .+..+ .+-.- +.-||..|++|+|+.+
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~~-----~~~~r----~vG~~-----------------------vg~lH~~givHGDLTt 120 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEAR-----PDLLR----EVGRL-----------------------VGKLHKAGIVHGDLTT 120 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhcc-----hHHHH----HHHHH-----------------------HHHHHhcCeecCCCcc
Confidence 788999999 667777877651 22222 22222 6778999999999998
Q ss_pred CC-------eEEeecCCcccC
Q psy2006 151 CD-------IRLIDFGSATFD 164 (351)
Q Consensus 151 ~n-------i~l~Dfg~s~~~ 164 (351)
+| +.++|||++...
T Consensus 121 sNiIl~~~~i~~IDfGLg~~s 141 (204)
T COG3642 121 SNIILSGGRIYFIDFGLGEFS 141 (204)
T ss_pred ceEEEeCCcEEEEECCccccc
Confidence 77 588999998653
No 453
>KOG0667|consensus
Probab=98.73 E-value=2.6e-08 Score=96.74 Aligned_cols=44 Identities=34% Similarity=0.652 Sum_probs=39.1
Q ss_pred ccccccccCCCCeEEeecCCcccCCCCcccccCCCCccCCcccc
Q psy2006 141 KKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYM 184 (351)
Q Consensus 141 ~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~ 184 (351)
.+|+.-+-+...||++|||.|+...+...+++.+..|+|||++.
T Consensus 318 ENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVIL 361 (586)
T KOG0667|consen 318 ENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVIL 361 (586)
T ss_pred hheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhc
Confidence 46777777888999999999999999999999999999999654
No 454
>KOG0659|consensus
Probab=98.69 E-value=1.3e-08 Score=89.09 Aligned_cols=78 Identities=41% Similarity=0.680 Sum_probs=61.1
Q ss_pred CCCeEEeecCCcccCCCCcc---cccCCCCccCCccccCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATFDDEHHS---TIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~---~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.+-+||.|||+|+....+.. ...-|.||++||.+++.
T Consensus 137 ~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~ 216 (318)
T KOG0659|consen 137 DGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFR 216 (318)
T ss_pred CCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHH
Confidence 56689999999987443332 23689999999955432
Q ss_pred ---------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 187 ---------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 187 ---------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.+..++++.||+.+|+.++|.+|.|++++|.|+||...|..
T Consensus 217 ~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 217 ALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred HcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 11234677899999999999999999999999999876654
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.68 E-value=1.1e-07 Score=83.08 Aligned_cols=103 Identities=16% Similarity=0.042 Sum_probs=74.0
Q ss_pred CccccCcccceEEEEEEeecCcEEEEEEecchhh--hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeC---CeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEK--YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH---GHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~---~~~~l 75 (351)
++.||.|.++.||++... +|+.+++|+...... .......|.++++.+.+.+.. +.+++.+.... +..++
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~----vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVP----VPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCC----CCCEEEECCCCCccCCceE
Confidence 367999999999999863 358899999875432 345678899999999764422 66677766654 36799
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHh
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYA 111 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~ 111 (351)
||||+ |.++.+.+.. ..+++.....++.++...
T Consensus 78 v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~ 111 (223)
T cd05154 78 VMERVDGRVLRDRLLR---PELSPEERRALARALADT 111 (223)
T ss_pred EEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 99999 7777765432 135666666777777666
No 456
>KOG0596|consensus
Probab=98.64 E-value=3.9e-08 Score=93.86 Aligned_cols=99 Identities=27% Similarity=0.443 Sum_probs=70.5
Q ss_pred HHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCCCcc-----cccCCCCccCCcc
Q psy2006 108 LIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHS-----TIVSTRHYRAPER 182 (351)
Q Consensus 108 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~~~~-----~~~~~~~~~~pe~ 182 (351)
+-.-|+.++.|-+...+ .||--+|+ +||+|||+|.......+ .-+||+.|++||+
T Consensus 473 V~~IH~~gIVHSDLKPA-----------NFLlVkG~---------LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEA 532 (677)
T KOG0596|consen 473 VKTIHQHGIVHSDLKPA-----------NFLLVKGR---------LKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEA 532 (677)
T ss_pred HHHHHHhceeecCCCcc-----------cEEEEeee---------EEeeeechhcccCccccceeeccccCcccccCHHH
Confidence 33446777776665555 33333333 79999999987544433 3589999999996
Q ss_pred ccCCC---------------------------------------------------------h--hhHHHHHHHHHHhhc
Q psy2006 183 YMASD---------------------------------------------------------D--EEHRQLFDLISKMLE 203 (351)
Q Consensus 183 ~~~~~---------------------------------------------------------~--~~~~~~~~~i~~~L~ 203 (351)
+.... + ....++++++..||.
T Consensus 533 l~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~ 612 (677)
T KOG0596|consen 533 LTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLA 612 (677)
T ss_pred HhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHh
Confidence 64220 0 011348899999999
Q ss_pred cCCCCCCChhhhhcCCCCCCCCc
Q psy2006 204 YEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 204 ~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
+||.+|+|+.++|+|||++..+-
T Consensus 613 rdPkkR~si~eLLqhpFl~~~~i 635 (677)
T KOG0596|consen 613 RDPKKRWSIPELLQHPFLQIQPI 635 (677)
T ss_pred cCcccCCCcHHHhcCcccccccc
Confidence 99999999999999999987553
No 457
>KOG0593|consensus
Probab=98.63 E-value=1.5e-08 Score=90.10 Aligned_cols=108 Identities=26% Similarity=0.452 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccC---CCCcccccCCCCc
Q psy2006 101 VRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHY 177 (351)
Q Consensus 101 ~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~ 177 (351)
...++..+-..+.++..|.+...-..+ --+.+-++|+|||+|+-. ....+++..|.||
T Consensus 107 l~Q~l~ai~~cHk~n~IHRDIKPENIL-------------------it~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 107 LYQLLKAIHFCHKNNCIHRDIKPENIL-------------------ITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred HHHHHHHhhhhhhcCeecccCChhheE-------------------EecCCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 456667777776666655543322111 112345899999999863 3346678999999
Q ss_pred cCCccccCC-----------------------------------------------------------------------
Q psy2006 178 RAPERYMAS----------------------------------------------------------------------- 186 (351)
Q Consensus 178 ~~pe~~~~~----------------------------------------------------------------------- 186 (351)
++||.+.++
T Consensus 168 RaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~e 247 (396)
T KOG0593|consen 168 RAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPE 247 (396)
T ss_pred cChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCcc
Confidence 999955432
Q ss_pred -----ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 187 -----DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 187 -----~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.+..+.-+.||+.+||.+||++|++-+++|.|++|......
T Consensus 248 pLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er 293 (396)
T KOG0593|consen 248 PLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIER 293 (396)
T ss_pred chhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHH
Confidence 01122457799999999999999999999999999654443
No 458
>KOG0583|consensus
Probab=98.62 E-value=3.6e-08 Score=93.34 Aligned_cols=78 Identities=33% Similarity=0.470 Sum_probs=63.9
Q ss_pred cccCCCCeEEeecCCcccC---CCCcccccCCCCccCCccccCC------------------------------------
Q psy2006 146 RRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPERYMAS------------------------------------ 186 (351)
Q Consensus 146 ~d~k~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~~~pe~~~~~------------------------------------ 186 (351)
+|...+|+||+|||+|... +....+.+||+.|++||.+...
T Consensus 153 ld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~ 232 (370)
T KOG0583|consen 153 LDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLY 232 (370)
T ss_pred ecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHH
Confidence 3333388999999999865 4557779999999999965432
Q ss_pred ----------Chhh-HHHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 187 ----------DDEE-HRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 187 ----------~~~~-~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
+... +.++.+++.+||..+|.+|+|+.+++.||||+.
T Consensus 233 ~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 233 RKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1223 788899999999999999999999999999986
No 459
>KOG0663|consensus
Probab=98.61 E-value=2.9e-08 Score=89.49 Aligned_cols=78 Identities=32% Similarity=0.562 Sum_probs=62.6
Q ss_pred CCCeEEeecCCcccCCCC---cccccCCCCccCCccccCCC---------------------------------------
Q psy2006 150 RCDIRLIDFGSATFDDEH---HSTIVSTRHYRAPERYMASD--------------------------------------- 187 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~---~~~~~~~~~~~~pe~~~~~~--------------------------------------- 187 (351)
.+-++++|||+|+....+ .+...-|.||++||.+.+..
T Consensus 213 ~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ 292 (419)
T KOG0663|consen 213 KGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFK 292 (419)
T ss_pred CCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHH
Confidence 355899999999986555 66778899999999544320
Q ss_pred --------------------------------------hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 188 --------------------------------------DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 188 --------------------------------------~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
...+++..+|+..+|.+||.+|.||+++|.|+||...|.+
T Consensus 293 llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 293 LLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred HhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence 0134678899999999999999999999999999886644
No 460
>KOG0198|consensus
Probab=98.60 E-value=6.4e-08 Score=88.76 Aligned_cols=108 Identities=22% Similarity=0.351 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCC------CcccccC
Q psy2006 100 QVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDE------HHSTIVS 173 (351)
Q Consensus 100 ~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~------~~~~~~~ 173 (351)
.++.+...+..-|.+++.|.+......+ .+...+.+||.|||.++..+. ......|
T Consensus 122 ytr~iL~GL~ylHs~g~vH~DiK~~NiL------------------l~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~G 183 (313)
T KOG0198|consen 122 YTRQILEGLAYLHSKGIVHCDIKPANIL------------------LDPSNGDVKLADFGLAKKLESKGTKSDSELSVQG 183 (313)
T ss_pred HHHHHHHHHHHHHhCCEeccCcccceEE------------------EeCCCCeEEeccCccccccccccccccccccccC
Confidence 3677788888776555555443322111 111146799999999976442 1334789
Q ss_pred CCCccCCcccc-CC-----------------------------------------------ChhhHHHHHHHHHHhhccC
Q psy2006 174 TRHYRAPERYM-AS-----------------------------------------------DDEEHRQLFDLISKMLEYE 205 (351)
Q Consensus 174 ~~~~~~pe~~~-~~-----------------------------------------------~~~~~~~~~~~i~~~L~~~ 205 (351)
|+.|++||.+. +. +...++++.+|+.+|+.++
T Consensus 184 tp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~ 263 (313)
T KOG0198|consen 184 TPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRD 263 (313)
T ss_pred CccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcC
Confidence 99999999776 21 0112347889999999999
Q ss_pred CCCCCChhhhhcCCCCCCCC
Q psy2006 206 PSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 206 p~~R~t~~e~l~~~~~~~~~ 225 (351)
|.+||||+++|.|||.....
T Consensus 264 p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 264 PEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred cccCcCHHHHhhChhhhccc
Confidence 99999999999999986533
No 461
>KOG0600|consensus
Probab=98.59 E-value=6.7e-08 Score=91.37 Aligned_cols=106 Identities=24% Similarity=0.389 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccC----CCCcccccCCCC
Q psy2006 101 VRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFD----DEHHSTIVSTRH 176 (351)
Q Consensus 101 ~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~----~~~~~~~~~~~~ 176 (351)
-+.++..+...|.++++|.+.... ...--..++++|.|||+|+.. ....+...-|.|
T Consensus 224 mkQLl~Gl~~cH~~gvlHRDIK~S-------------------NiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLW 284 (560)
T KOG0600|consen 224 MKQLLEGLEYCHSRGVLHRDIKGS-------------------NILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLW 284 (560)
T ss_pred HHHHHHHHHHHhhcCeeecccccc-------------------ceEEcCCCCEEeccccceeeccCCCCcccccceEEee
Confidence 355677777776666655553322 222223577999999999852 334666788999
Q ss_pred ccCCccccCCC---------------------------------------------------------------------
Q psy2006 177 YRAPERYMASD--------------------------------------------------------------------- 187 (351)
Q Consensus 177 ~~~pe~~~~~~--------------------------------------------------------------------- 187 (351)
|++||.+++..
T Consensus 285 YRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~ 364 (560)
T KOG0600|consen 285 YRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRR 364 (560)
T ss_pred ccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccch
Confidence 99999655430
Q ss_pred -----hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 188 -----DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 188 -----~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
.......++|+..||+.||++|.||.++|+++||...+
T Consensus 365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 365 LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred HHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 01114466899999999999999999999999995433
No 462
>KOG0616|consensus
Probab=98.58 E-value=2.9e-08 Score=88.07 Aligned_cols=81 Identities=23% Similarity=0.349 Sum_probs=67.4
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCCC-----------------------------------------
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASD----------------------------------------- 187 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~----------------------------------------- 187 (351)
+.+.++++|||+|+...+...+.||||.|+|||.+...+
T Consensus 179 ~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v 258 (355)
T KOG0616|consen 179 QNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV 258 (355)
T ss_pred cCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc
Confidence 578899999999999888888999999999999765431
Q ss_pred ---hhhHHHHHHHHHHhhccCCCCCC-----ChhhhhcCCCCCCCCchhh
Q psy2006 188 ---DEEHRQLFDLISKMLEYEPSERI-----SLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 188 ---~~~~~~~~~~i~~~L~~~p~~R~-----t~~e~l~~~~~~~~~~~~~ 229 (351)
.--+.++.+++.++|..|-.+|. ...++.+||||+...|..-
T Consensus 259 ~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i 308 (355)
T KOG0616|consen 259 KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAI 308 (355)
T ss_pred cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHH
Confidence 22346788999999999999992 3678999999999888644
No 463
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.57 E-value=3.1e-07 Score=78.46 Aligned_cols=122 Identities=20% Similarity=0.244 Sum_probs=72.6
Q ss_pred eEEEEEEeecCcEEEEEEecchh--------------h-------------hhHHHHHHHHHHHHhCCCCCCCCcceeee
Q psy2006 11 HVCTNVVYEVDSVVALKIIKNVE--------------K-------------YREAARLEINALQKIGEKDPNGRHLCVKM 63 (351)
Q Consensus 11 ~V~~~~~~~~~~~vAiK~~~~~~--------------~-------------~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l 63 (351)
.||.|.. ..+..+|+|+.+... . ....+.+|.+.|.++...+-+ |..+
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~----vP~p 75 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVP----VPKP 75 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-S----S--E
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCcc----CCcE
Confidence 4899996 578899999996421 0 113457899999999765433 7777
Q ss_pred eeeEeeCCeEEEEEeccC--CCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccc
Q psy2006 64 LDWFDYHGHMCIAFEILG--LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141 (351)
Q Consensus 64 ~~~f~~~~~~~lV~E~~g--~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 141 (351)
+++- ..+|||||++ |.....+.... +.......++.+++.. -...+|..
T Consensus 76 ~~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~----------------------~~~~~~~~ 126 (188)
T PF01163_consen 76 YDYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEE----------------------IIKMLHKA 126 (188)
T ss_dssp EEEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHH----------------------HHHHHHCT
T ss_pred EEEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHH----------------------HHHHHHhc
Confidence 7553 3479999997 64333343332 1233445555555543 03345899
Q ss_pred cccccccCCCC-------eEEeecCCcccCCC
Q psy2006 142 KREVRRVRRCD-------IRLIDFGSATFDDE 166 (351)
Q Consensus 142 ~i~h~d~k~~n-------i~l~Dfg~s~~~~~ 166 (351)
|++|+|+.+.| +.++|||.|.....
T Consensus 127 givHGDLs~~NIlv~~~~~~iIDf~qav~~~~ 158 (188)
T PF01163_consen 127 GIVHGDLSEYNILVDDGKVYIIDFGQAVDSSH 158 (188)
T ss_dssp TEEESS-STTSEEEETTCEEE--GTTEEETTS
T ss_pred CceecCCChhhEEeecceEEEEecCcceecCC
Confidence 99999999777 47888988866443
No 464
>KOG0032|consensus
Probab=98.57 E-value=1.5e-07 Score=89.25 Aligned_cols=74 Identities=38% Similarity=0.610 Sum_probs=60.9
Q ss_pred CCeEEeecCCcccCCC--CcccccCCCCccCCccccCC------------------------------------------
Q psy2006 151 CDIRLIDFGSATFDDE--HHSTIVSTRHYRAPERYMAS------------------------------------------ 186 (351)
Q Consensus 151 ~ni~l~Dfg~s~~~~~--~~~~~~~~~~~~~pe~~~~~------------------------------------------ 186 (351)
+.++++|||+|..... .....+||+.|+|||.+...
T Consensus 176 ~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~ 255 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF 255 (382)
T ss_pred CcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC
Confidence 4699999999987544 46678999999999966521
Q ss_pred ------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 187 ------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 187 ------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
-+..++.+.+||.+||..||..|+|+.++|+|||+...
T Consensus 256 ~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 256 DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 01234678899999999999999999999999998765
No 465
>KOG0579|consensus
Probab=98.56 E-value=6.7e-08 Score=93.65 Aligned_cols=78 Identities=29% Similarity=0.509 Sum_probs=62.4
Q ss_pred CCCeEEeecCCccc---CCCCcccccCCCCccCCccccCCC---------------------------------------
Q psy2006 150 RCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPERYMASD--------------------------------------- 187 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~---~~~~~~~~~~~~~~~~pe~~~~~~--------------------------------------- 187 (351)
.|.|+|.|||+|.. .-+....++|||.|++||+++...
T Consensus 166 dGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll 245 (1187)
T KOG0579|consen 166 DGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 245 (1187)
T ss_pred cCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH
Confidence 46799999999954 344466799999999999765320
Q ss_pred -------------hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 188 -------------DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 188 -------------~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.-=+..+.||+.+||.++|..||++.++|.|||++..++.
T Consensus 246 KiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 246 KIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 0113457799999999999999999999999999987764
No 466
>KOG0201|consensus
Probab=98.53 E-value=4e-08 Score=91.40 Aligned_cols=76 Identities=29% Similarity=0.409 Sum_probs=61.3
Q ss_pred CCCeEEeecCCcccCC---CCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATFDD---EHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~---~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.++++|.|||++.+.. ....++.|||.|||||++...
T Consensus 147 ~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~ 226 (467)
T KOG0201|consen 147 SGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS 226 (467)
T ss_pred cCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC
Confidence 3789999999997632 223678999999999977642
Q ss_pred -----ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 187 -----DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 187 -----~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
.+.-+..+.+|+..||.++|..||+|.++|.|+|++...
T Consensus 227 ~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 227 APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 123346688999999999999999999999999998744
No 467
>KOG0594|consensus
Probab=98.51 E-value=1.3e-07 Score=85.89 Aligned_cols=108 Identities=30% Similarity=0.462 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCC---CCcccccCCCC
Q psy2006 100 QVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDD---EHHSTIVSTRH 176 (351)
Q Consensus 100 ~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~---~~~~~~~~~~~ 176 (351)
..+.+...+...|.++++|.+ |.- ++++.-+ .+.+||+|||+|+... ...+..+.|.+
T Consensus 125 ~m~Qll~gl~~~H~~~IlHRD--------------LKP---QNlLi~~--~G~lKlaDFGlAra~~ip~~~yt~evvTlW 185 (323)
T KOG0594|consen 125 FMRQLLRGLAFLHSHGILHRD--------------LKP---QNLLISS--SGVLKLADFGLARAFSIPMRTYTPEVVTLW 185 (323)
T ss_pred HHHHHHHHHHHHHhCCeeccc--------------CCc---ceEEECC--CCcEeeeccchHHHhcCCcccccccEEEee
Confidence 357788889888888887776 321 3333332 6789999999997633 33556789999
Q ss_pred ccCCccccCCC---------------------------------------------------------------------
Q psy2006 177 YRAPERYMASD--------------------------------------------------------------------- 187 (351)
Q Consensus 177 ~~~pe~~~~~~--------------------------------------------------------------------- 187 (351)
|++||.+.+..
T Consensus 186 YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 186 YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 99999655330
Q ss_pred ------hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 188 ------DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 188 ------~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
+....+..+++.+||.++|.+|.|+..+|.||||...+.
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 011146779999999999999999999999999988753
No 468
>KOG1290|consensus
Probab=98.51 E-value=1.2e-07 Score=89.42 Aligned_cols=75 Identities=32% Similarity=0.707 Sum_probs=64.3
Q ss_pred eEEeecCCcccCCCCcccccCCCCccCCccccCC----------------------------------------------
Q psy2006 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS---------------------------------------------- 186 (351)
Q Consensus 153 i~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~---------------------------------------------- 186 (351)
+||.|||=|+-...+.+..+.|.+|++||++.+.
T Consensus 393 vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~EL 472 (590)
T KOG1290|consen 393 VKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMEL 472 (590)
T ss_pred EEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHH
Confidence 7999999999888888999999999999976543
Q ss_pred ----------------------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCC
Q psy2006 187 ----------------------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220 (351)
Q Consensus 187 ----------------------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~ 220 (351)
..++..++.+|+.-||.++|++|+||.++|+|||
T Consensus 473 LG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPw 552 (590)
T KOG1290|consen 473 LGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPW 552 (590)
T ss_pred HhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCcc
Confidence 1234456779999999999999999999999999
Q ss_pred CCCCCch
Q psy2006 221 FDKLPSS 227 (351)
Q Consensus 221 ~~~~~~~ 227 (351)
++..+..
T Consensus 553 Ln~~~~~ 559 (590)
T KOG1290|consen 553 LNPVAGP 559 (590)
T ss_pred ccCCCCC
Confidence 9876643
No 469
>KOG0658|consensus
Probab=98.51 E-value=7.1e-08 Score=87.87 Aligned_cols=79 Identities=39% Similarity=0.645 Sum_probs=63.4
Q ss_pred CCCCeEEeecCCccc--CCCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 149 RRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~--~~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
..+-+||+|||-|+. .+++...+..|..|+|||.+++.
T Consensus 161 ~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik 240 (364)
T KOG0658|consen 161 DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIK 240 (364)
T ss_pred CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence 345689999999976 45556678899999999965532
Q ss_pred ----------------------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 187 ----------------------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 187 ----------------------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.....+++.+|+.++|.++|++|.++.++|.||+|+.+...
T Consensus 241 ~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 241 VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 01123678899999999999999999999999999887755
No 470
>KOG0604|consensus
Probab=98.49 E-value=1.4e-07 Score=83.95 Aligned_cols=81 Identities=28% Similarity=0.405 Sum_probs=64.0
Q ss_pred CCCCeEEeecCCcccCC--CCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 149 RRCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~--~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.+.-+||+|||+|+... ....+-+-||.|.+||.+...
T Consensus 199 ~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~r 278 (400)
T KOG0604|consen 199 PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRR 278 (400)
T ss_pred CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhH
Confidence 34558999999998755 445667889999999954321
Q ss_pred --------C----hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 187 --------D----DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 187 --------~----~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
+ ..-+++++++|+.+|+.+|.+|.|+.+++.|||.++...-..
T Consensus 279 I~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~ 333 (400)
T KOG0604|consen 279 IRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQ 333 (400)
T ss_pred hhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCC
Confidence 0 134688999999999999999999999999999987555433
No 471
>KOG0598|consensus
Probab=98.46 E-value=1.1e-07 Score=86.63 Aligned_cols=82 Identities=29% Similarity=0.469 Sum_probs=65.0
Q ss_pred CCCeEEeecCCccc---CCCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~---~~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.++++|+|||+|+. ......++|||+.|+|||.+...
T Consensus 161 ~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~ 240 (357)
T KOG0598|consen 161 QGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKG 240 (357)
T ss_pred CCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcC
Confidence 56799999999985 23345668999999999965432
Q ss_pred -----ChhhHHHHHHHHHHhhccCCCCCC----ChhhhhcCCCCCCCCchhhhc
Q psy2006 187 -----DDEEHRQLFDLISKMLEYEPSERI----SLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 187 -----~~~~~~~~~~~i~~~L~~~p~~R~----t~~e~l~~~~~~~~~~~~~~~ 231 (351)
+.-.+.++.+++.++|..||.+|. .+.++.+||||....|..-..
T Consensus 241 k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~ 294 (357)
T KOG0598|consen 241 KLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLA 294 (357)
T ss_pred cCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHh
Confidence 112457788999999999999995 588899999999998865543
No 472
>PTZ00284 protein kinase; Provisional
Probab=98.45 E-value=2.2e-07 Score=91.21 Aligned_cols=35 Identities=29% Similarity=0.491 Sum_probs=30.8
Q ss_pred HHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 193 ~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
.+.+||.+||.+||.+|+|+.|+|+||||......
T Consensus 413 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 447 (467)
T PTZ00284 413 LLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPE 447 (467)
T ss_pred HHHHHHHHhCCcChhhCCCHHHHhcCccccccCCc
Confidence 35689999999999999999999999999875543
No 473
>KOG0690|consensus
Probab=98.45 E-value=1.2e-07 Score=85.24 Aligned_cols=81 Identities=25% Similarity=0.416 Sum_probs=66.2
Q ss_pred CCCCeEEeecCCcccC---CCCcccccCCCCccCCccccCC---------------------------------------
Q psy2006 149 RRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPERYMAS--------------------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~~~pe~~~~~--------------------------------------- 186 (351)
|+++|++.|||+++.+ .....++||||.|++||.+-..
T Consensus 303 kDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ 382 (516)
T KOG0690|consen 303 KDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM 382 (516)
T ss_pred cCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh
Confidence 6889999999999873 4446779999999999965322
Q ss_pred -----ChhhHHHHHHHHHHhhccCCCCCCC-----hhhhhcCCCCCCCCchhh
Q psy2006 187 -----DDEEHRQLFDLISKMLEYEPSERIS-----LSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 187 -----~~~~~~~~~~~i~~~L~~~p~~R~t-----~~e~l~~~~~~~~~~~~~ 229 (351)
+...++++..++..+|.+||.+|.. +.|+++|+||....|...
T Consensus 383 ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~ 435 (516)
T KOG0690|consen 383 EDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT 435 (516)
T ss_pred hhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence 2234577889999999999999965 789999999999888654
No 474
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.45 E-value=4e-06 Score=75.87 Aligned_cols=117 Identities=15% Similarity=0.027 Sum_probs=82.4
Q ss_pred eEEEEEEeecCcEEEEEEecchh--h----------hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEee-----CCeE
Q psy2006 11 HVCTNVVYEVDSVVALKIIKNVE--K----------YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY-----HGHM 73 (351)
Q Consensus 11 ~V~~~~~~~~~~~vAiK~~~~~~--~----------~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~-----~~~~ 73 (351)
.|.++. ..|+.|.||...... . ....+.+|.+.+.+|...+-. +..++.+++. ....
T Consensus 37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIp----tP~pVa~~e~~~~~~~~~s 110 (268)
T PRK15123 37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVD----TMTGVAFGERGSNPATRTS 110 (268)
T ss_pred eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCC----CCCeeEEEEecCCCcccee
Confidence 355544 567889999774321 0 011477899999988654433 5666666653 2368
Q ss_pred EEEEeccCC--CHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCC
Q psy2006 74 CIAFEILGL--SVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRC 151 (351)
Q Consensus 74 ~lV~E~~g~--sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ 151 (351)
+||+|++++ +|.+++........+......++.++... +.-||+.|++|+|++++
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~-----------------------i~~LH~~Gi~HgDL~~~ 167 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATM-----------------------VRDMHAAGINHRDCYIC 167 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHH-----------------------HHHHHHCcCccCCCChh
Confidence 899999944 79999865432344556666777777777 99999999999999999
Q ss_pred CeEEe
Q psy2006 152 DIRLI 156 (351)
Q Consensus 152 ni~l~ 156 (351)
|+.+.
T Consensus 168 NiLl~ 172 (268)
T PRK15123 168 HFLLH 172 (268)
T ss_pred hEEEe
Confidence 99886
No 475
>KOG0694|consensus
Probab=98.43 E-value=2.1e-07 Score=91.08 Aligned_cols=81 Identities=21% Similarity=0.425 Sum_probs=64.7
Q ss_pred CCCCeEEeecCCcccC---CCCcccccCCCCccCCccccCC----------------------------Ch---------
Q psy2006 149 RRCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPERYMAS----------------------------DD--------- 188 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~~~pe~~~~~----------------------------~~--------- 188 (351)
..|.+||.|||+++.. ....+++||||.|++||.+... ++
T Consensus 503 ~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~ 582 (694)
T KOG0694|consen 503 TEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN 582 (694)
T ss_pred ccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence 4688999999999983 3346779999999999965432 11
Q ss_pred -------hhHHHHHHHHHHhhccCCCCCCC-----hhhhhcCCCCCCCCchhh
Q psy2006 189 -------EEHRQLFDLISKMLEYEPSERIS-----LSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 189 -------~~~~~~~~~i~~~L~~~p~~R~t-----~~e~l~~~~~~~~~~~~~ 229 (351)
..+.++.++++++|..+|.+|.. ++++..||||..+.|..-
T Consensus 583 d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 583 DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDL 635 (694)
T ss_pred CCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHH
Confidence 12356789999999999999976 478999999999988655
No 476
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.41 E-value=4.7e-07 Score=84.36 Aligned_cols=110 Identities=19% Similarity=0.257 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccC---CCCcccccCCCCc
Q psy2006 101 VRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFD---DEHHSTIVSTRHY 177 (351)
Q Consensus 101 ~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~ 177 (351)
+..++..|..-|.+++.|.+...-. |+.. ..+.++|+|||+++.. ........||+.|
T Consensus 101 ~~qi~~~L~~lH~~~ivHrDlkp~N-----------------Ill~--~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y 161 (323)
T cd05571 101 GAEIVSALGYLHSCDVVYRDLKLEN-----------------LMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEY 161 (323)
T ss_pred HHHHHHHHHHHHhCCeEeCCCCHHH-----------------EEEC--CCCCEEEeeCCCCcccccCCCcccceecCccc
Confidence 4556666666655555544433222 2221 2456999999999753 2223446799999
Q ss_pred cCCccccCC--------------------------------------------ChhhHHHHHHHHHHhhccCCCCCC---
Q psy2006 178 RAPERYMAS--------------------------------------------DDEEHRQLFDLISKMLEYEPSERI--- 210 (351)
Q Consensus 178 ~~pe~~~~~--------------------------------------------~~~~~~~~~~~i~~~L~~~p~~R~--- 210 (351)
++||.+... ....++++.++|.+||..||.+|+
T Consensus 162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 241 (323)
T cd05571 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGG 241 (323)
T ss_pred cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCC
Confidence 999954321 011235688999999999999999
Q ss_pred --ChhhhhcCCCCCCCCchhh
Q psy2006 211 --SLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 211 --t~~e~l~~~~~~~~~~~~~ 229 (351)
++.++++||||....+...
T Consensus 242 ~~~~~~ll~h~~f~~~~~~~~ 262 (323)
T cd05571 242 PEDAKEIMEHRFFASINWQDV 262 (323)
T ss_pred CCCHHHHHcCCCcCCCCHHHH
Confidence 8999999999988766433
No 477
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.38 E-value=3.6e-07 Score=88.97 Aligned_cols=34 Identities=44% Similarity=0.796 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 192 RQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 192 ~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
+++.+||.+||.+||.+|+|+.++|+||||....
T Consensus 325 ~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 325 DDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 4678999999999999999999999999997654
No 478
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.36 E-value=9e-07 Score=80.93 Aligned_cols=30 Identities=47% Similarity=0.738 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 192 RQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 192 ~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
+++.++|.+||.+||.+|+|++|+|+||||
T Consensus 259 ~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 259 TDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred HHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 456789999999999999999999999997
No 479
>KOG4279|consensus
Probab=98.35 E-value=7.4e-07 Score=87.47 Aligned_cols=77 Identities=23% Similarity=0.351 Sum_probs=62.6
Q ss_pred CCCeEEeecCCccc---CCCCcccccCCCCccCCccccC-----------------------------------------
Q psy2006 150 RCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPERYMA----------------------------------------- 185 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~---~~~~~~~~~~~~~~~~pe~~~~----------------------------------------- 185 (351)
.+-+||+|||.|+. .+.-..++.||.+|++||.+-.
T Consensus 712 SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV 791 (1226)
T KOG4279|consen 712 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV 791 (1226)
T ss_pred cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh
Confidence 35589999999976 2344556899999999995421
Q ss_pred --------CChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 186 --------SDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 186 --------~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
.+.+.+.++.+||.+|...||+.||+|.++|.+||++.-+.
T Consensus 792 GmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~k 840 (1226)
T KOG4279|consen 792 GMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNK 840 (1226)
T ss_pred cceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCC
Confidence 13567788999999999999999999999999999987643
No 480
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.33 E-value=7.1e-07 Score=82.68 Aligned_cols=29 Identities=34% Similarity=0.815 Sum_probs=27.2
Q ss_pred HHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 193 QLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 193 ~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
++.++|.+||.+||.+|+|++|+|+||||
T Consensus 289 ~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 289 KAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 36789999999999999999999999997
No 481
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.33 E-value=9.4e-07 Score=82.93 Aligned_cols=76 Identities=39% Similarity=0.663 Sum_probs=59.6
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCCC--------------------------h---------------
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASD--------------------------D--------------- 188 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~~--------------------------~--------------- 188 (351)
.++++|+|||+++..........+|+.|++||.+.... .
T Consensus 154 ~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07878 154 DCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVG 233 (343)
T ss_pred CCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC
Confidence 46799999999988766667778999999999653210 0
Q ss_pred -----------------------------------hhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 189 -----------------------------------EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 189 -----------------------------------~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
...+.+.++|.+||..||.+|+|+.++|.||||....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 0012356899999999999999999999999997644
No 482
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.31 E-value=1.4e-06 Score=82.39 Aligned_cols=29 Identities=34% Similarity=0.492 Sum_probs=26.8
Q ss_pred HHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 195 ~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
.++|.+||.+||.+|||+.|+|+||||+.
T Consensus 328 ~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 328 EFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 34899999999999999999999999975
No 483
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.31 E-value=1.5e-06 Score=83.41 Aligned_cols=33 Identities=33% Similarity=0.492 Sum_probs=30.2
Q ss_pred HHHHHHHHhhccCCCCCCChhhhhcCCCCCCCC
Q psy2006 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225 (351)
Q Consensus 193 ~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~ 225 (351)
++.++|.+||.+||.+|+|+.|+|+||||+..+
T Consensus 351 ~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 351 DLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred hHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 567899999999999999999999999998754
No 484
>KOG0592|consensus
Probab=98.31 E-value=5.9e-07 Score=85.81 Aligned_cols=81 Identities=31% Similarity=0.462 Sum_probs=63.5
Q ss_pred CCCCeEEeecCCcccCCCC----------------cccccCCCCccCCccccCC--------------------------
Q psy2006 149 RRCDIRLIDFGSATFDDEH----------------HSTIVSTRHYRAPERYMAS-------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~----------------~~~~~~~~~~~~pe~~~~~-------------------------- 186 (351)
+++.++|.|||-|+..... ...+.||-.|++||.+...
T Consensus 209 ~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 209 KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 4567999999998752111 1348899999999965432
Q ss_pred ------------------ChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhh
Q psy2006 187 ------------------DDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229 (351)
Q Consensus 187 ------------------~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~ 229 (351)
++.-.+.+.|+|.++|..||.+|+|++++.+||||..+.|..-
T Consensus 289 a~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nl 349 (604)
T KOG0592|consen 289 AANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENL 349 (604)
T ss_pred cccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhh
Confidence 1122366889999999999999999999999999999998774
No 485
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.30 E-value=1.1e-06 Score=80.20 Aligned_cols=103 Identities=29% Similarity=0.413 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeEEeecCCcccCCC--CcccccCCCCc
Q psy2006 100 QVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDE--HHSTIVSTRHY 177 (351)
Q Consensus 100 ~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~l~Dfg~s~~~~~--~~~~~~~~~~~ 177 (351)
.+..++..+..-|++++.|.....-..+ .. ..+.++|+|||+++.... ......|++.|
T Consensus 115 i~~qi~~aL~~lH~~~iiH~dlkp~Nil-----------------~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y 175 (290)
T cd07862 115 MMFQLLRGLDFLHSHRVVHRDLKPQNIL-----------------VT--SSGQIKLADFGLARIYSFQMALTSVVVTLWY 175 (290)
T ss_pred HHHHHHHHHHHHHHCCeeeCCCCHHHEE-----------------Ec--CCCCEEEccccceEeccCCcccccccccccc
Confidence 4566777777766666655543332222 11 245699999999975332 23346789999
Q ss_pred cCCccccCC----------------------------C------------------------------------------
Q psy2006 178 RAPERYMAS----------------------------D------------------------------------------ 187 (351)
Q Consensus 178 ~~pe~~~~~----------------------------~------------------------------------------ 187 (351)
++||.+... .
T Consensus 176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (290)
T cd07862 176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF 255 (290)
T ss_pred cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHH
Confidence 999954211 0
Q ss_pred -hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 188 -DEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 188 -~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
....+.+.+++.+||..+|++|||+.++|.||||
T Consensus 256 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 256 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0012345689999999999999999999999997
No 486
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.30 E-value=5.4e-07 Score=82.57 Aligned_cols=78 Identities=26% Similarity=0.336 Sum_probs=60.9
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCC-------------------------------------------
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS------------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~------------------------------------------- 186 (351)
.+.++|+|||+++..........|++.|++||.+...
T Consensus 137 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 216 (291)
T cd05612 137 EGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE 216 (291)
T ss_pred CCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC
Confidence 4569999999998765555567899999999954321
Q ss_pred -ChhhHHHHHHHHHHhhccCCCCCCC-----hhhhhcCCCCCCCCch
Q psy2006 187 -DDEEHRQLFDLISKMLEYEPSERIS-----LSEALRHPFFDKLPSS 227 (351)
Q Consensus 187 -~~~~~~~~~~~i~~~L~~~p~~R~t-----~~e~l~~~~~~~~~~~ 227 (351)
+...+..+.++|.+||..||.+|++ +++++.||||....+.
T Consensus 217 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 217 FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 0112346789999999999999995 9999999999876653
No 487
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.29 E-value=8.3e-07 Score=81.76 Aligned_cols=34 Identities=41% Similarity=0.663 Sum_probs=30.8
Q ss_pred HHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCc
Q psy2006 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKLPS 226 (351)
Q Consensus 193 ~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~ 226 (351)
++.+++.+||.+||.+|+|+.++|.||||...+.
T Consensus 263 ~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 263 HAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred HHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 4668999999999999999999999999987664
No 488
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.27 E-value=2.2e-06 Score=81.08 Aligned_cols=32 Identities=53% Similarity=0.818 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhccCCCCCCChhhhhcCCCCCC
Q psy2006 192 RQLFDLISKMLEYEPSERISLSEALRHPFFDK 223 (351)
Q Consensus 192 ~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~ 223 (351)
+++.++|.+||.+||++|+|+.|+|.||||..
T Consensus 289 ~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 289 SQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred hhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 35679999999999999999999999999864
No 489
>KOG4717|consensus
Probab=98.26 E-value=1.1e-06 Score=83.58 Aligned_cols=83 Identities=23% Similarity=0.345 Sum_probs=66.8
Q ss_pred CCCCeEEeecCCccc--CCCCcccccCCCCccCCccccCCC---------------------------------------
Q psy2006 149 RRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPERYMASD--------------------------------------- 187 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~--~~~~~~~~~~~~~~~~pe~~~~~~--------------------------------------- 187 (351)
|-+-+||.|||++.. ..+..++.||+..|-+||.+.+..
T Consensus 154 KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD 233 (864)
T KOG4717|consen 154 KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD 233 (864)
T ss_pred ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc
Confidence 556689999999954 566688899999999999776541
Q ss_pred ------hhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchhhhc
Q psy2006 188 ------DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231 (351)
Q Consensus 188 ------~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~~~~ 231 (351)
.--+.+..++|.+||..||.+|.+++++..++|++....+....
T Consensus 234 CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~ 283 (864)
T KOG4717|consen 234 CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTA 283 (864)
T ss_pred ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcccc
Confidence 12235677999999999999999999999999998766554443
No 490
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.26 E-value=2.1e-06 Score=80.27 Aligned_cols=78 Identities=26% Similarity=0.371 Sum_probs=62.1
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCC----------------------------Ch-------------
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS----------------------------DD------------- 188 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~----------------------------~~------------- 188 (351)
.++++|+|||+++..........||+.|++||.+... ..
T Consensus 137 ~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 216 (333)
T cd05600 137 SGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET 216 (333)
T ss_pred CCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc
Confidence 4679999999998766555667899999999954211 00
Q ss_pred -----------hhHHHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 189 -----------EEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 189 -----------~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
..++++.++|.+||..+|.+|+++.+++.||||....+.
T Consensus 217 ~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~ 266 (333)
T cd05600 217 LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWN 266 (333)
T ss_pred ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHH
Confidence 114678899999999999999999999999999987654
No 491
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.26 E-value=7.7e-07 Score=83.64 Aligned_cols=80 Identities=24% Similarity=0.340 Sum_probs=62.9
Q ss_pred CCCCeEEeecCCcccCCCCcccccCCCCccCCccccCC------------------------------------------
Q psy2006 149 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS------------------------------------------ 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~------------------------------------------ 186 (351)
..++++|+|||+++..+.......||+.|+|||.+...
T Consensus 166 ~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~ 245 (340)
T PTZ00426 166 KDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII 245 (340)
T ss_pred CCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC
Confidence 35679999999998766656667899999999954211
Q ss_pred --ChhhHHHHHHHHHHhhccCCCCCC-----ChhhhhcCCCCCCCCchh
Q psy2006 187 --DDEEHRQLFDLISKMLEYEPSERI-----SLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 187 --~~~~~~~~~~~i~~~L~~~p~~R~-----t~~e~l~~~~~~~~~~~~ 228 (351)
+...++.+.++|.+||..+|.+|+ ++++++.||||....|..
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~ 294 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVS 294 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 011235678999999999999995 899999999999877654
No 492
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.26 E-value=1.3e-06 Score=79.75 Aligned_cols=78 Identities=26% Similarity=0.333 Sum_probs=58.5
Q ss_pred CCCeEEeecCCcccCC--CCcccccCCCCccCCccccCC----------------------C------------------
Q psy2006 150 RCDIRLIDFGSATFDD--EHHSTIVSTRHYRAPERYMAS----------------------D------------------ 187 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~--~~~~~~~~~~~~~~pe~~~~~----------------------~------------------ 187 (351)
.+.++|+|||++.... .......|++.|++||.+... .
T Consensus 138 ~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 217 (285)
T cd05631 138 RGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRV 217 (285)
T ss_pred CCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHh
Confidence 4568999999997632 223456789999999954321 0
Q ss_pred --------hhhHHHHHHHHHHhhccCCCCCCC-----hhhhhcCCCCCCCCch
Q psy2006 188 --------DEEHRQLFDLISKMLEYEPSERIS-----LSEALRHPFFDKLPSS 227 (351)
Q Consensus 188 --------~~~~~~~~~~i~~~L~~~p~~R~t-----~~e~l~~~~~~~~~~~ 227 (351)
...++++.+++.+||..+|.+|++ ++++++||||....+.
T Consensus 218 ~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 218 KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 012346779999999999999987 8999999999886653
No 493
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.26 E-value=2.2e-06 Score=80.81 Aligned_cols=32 Identities=50% Similarity=0.809 Sum_probs=29.0
Q ss_pred HHHHHHHHhhccCCCCCCChhhhhcCCCCCCC
Q psy2006 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKL 224 (351)
Q Consensus 193 ~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~ 224 (351)
++.++|.+||..||.+|+|+.++|+||||+..
T Consensus 286 ~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 286 QARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 46789999999999999999999999999643
No 494
>KOG0601|consensus
Probab=98.25 E-value=1.8e-06 Score=83.70 Aligned_cols=190 Identities=17% Similarity=0.020 Sum_probs=127.5
Q ss_pred CccccCcccceEEEEEEe-ecCcEEEEEEecch---hhhhHHHHHHHHHHHHhC-CCCCCCCcceeeeeeeEeeCCeEEE
Q psy2006 1 MCSLNCVASNHVCTNVVY-EVDSVVALKIIKNV---EKYREAARLEINALQKIG-EKDPNGRHLCVKMLDWFDYHGHMCI 75 (351)
Q Consensus 1 ~~~iG~G~~g~V~~~~~~-~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~-h~~~~g~~~Iv~l~~~f~~~~~~~l 75 (351)
+.+||.|.|+.|+.+.-+ .++..|++|-+.+. .........|+.+...+. |.+ ++..+..|...++.+|
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~------~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP------SVGKNSSWSQLRQGYI 343 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc------cCCCCCCccccccccC
Confidence 357999999999988754 68889999998653 122233456777777765 233 8888889988889999
Q ss_pred EEecc-CCCHHHHHHhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccccccccccccCCCCeE
Q psy2006 76 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIR 154 (351)
Q Consensus 76 V~E~~-g~sL~~~l~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d~k~~ni~ 154 (351)
--||| ++++...+... ..+.+...+++..|++.+ +.++|++.++|+|++++||.
T Consensus 344 p~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~-----------------------l~~i~s~~~~~~d~~psni~ 398 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTA-----------------------LNVIHSKLFVHLDVKPSNIL 398 (524)
T ss_pred chhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhc-----------------------cccccchhhhccccccccee
Confidence 99999 88776655322 246677777777777777 99999999999999999985
Q ss_pred Eee---------cCCcccCCCCcccccCCCCccC-Ccccc----------------------------------------
Q psy2006 155 LID---------FGSATFDDEHHSTIVSTRHYRA-PERYM---------------------------------------- 184 (351)
Q Consensus 155 l~D---------fg~s~~~~~~~~~~~~~~~~~~-pe~~~---------------------------------------- 184 (351)
+.. ||...........+...-.+.+ .|.+.
T Consensus 399 i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~ 478 (524)
T KOG0601|consen 399 ISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSG 478 (524)
T ss_pred eccchhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeeecc
Confidence 554 4444321111111111111111 11000
Q ss_pred --CCChhhHHHHHHHHHHhhccCCCCCCChhhhhcCCCC
Q psy2006 185 --ASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF 221 (351)
Q Consensus 185 --~~~~~~~~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~ 221 (351)
........++..+...|...++..|+.+.++..+..|
T Consensus 479 ~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 479 DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 0012233677788888899999999999888777655
No 495
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.25 E-value=8.2e-07 Score=82.96 Aligned_cols=78 Identities=22% Similarity=0.377 Sum_probs=60.8
Q ss_pred CCCeEEeecCCcccCCCCcccccCCCCccCCccccCC----------------------------C--------------
Q psy2006 150 RCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS----------------------------D-------------- 187 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~~~~~~~~~~~~~~~~pe~~~~~----------------------------~-------------- 187 (351)
.++++|+|||+++..........||+.|++||.+... .
T Consensus 154 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 233 (329)
T PTZ00263 154 KGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK 233 (329)
T ss_pred CCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC
Confidence 5679999999998765555567899999999954321 0
Q ss_pred --hhhHHHHHHHHHHhhccCCCCCCC-----hhhhhcCCCCCCCCch
Q psy2006 188 --DEEHRQLFDLISKMLEYEPSERIS-----LSEALRHPFFDKLPSS 227 (351)
Q Consensus 188 --~~~~~~~~~~i~~~L~~~p~~R~t-----~~e~l~~~~~~~~~~~ 227 (351)
...+..+.++|.+||..||.+|++ +++++.||||....+.
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 012245779999999999999987 7999999999876554
No 496
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.24 E-value=2e-06 Score=79.68 Aligned_cols=77 Identities=32% Similarity=0.551 Sum_probs=57.3
Q ss_pred CCCeEEeecCCcccC---CCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.++++|+|||+++.. ........||+.|++||.+...
T Consensus 129 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~ 208 (312)
T cd05585 129 QGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE 208 (312)
T ss_pred CCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC
Confidence 456999999999752 2223346799999999954321
Q ss_pred ----ChhhHHHHHHHHHHhhccCCCCCC---ChhhhhcCCCCCCCCc
Q psy2006 187 ----DDEEHRQLFDLISKMLEYEPSERI---SLSEALRHPFFDKLPS 226 (351)
Q Consensus 187 ----~~~~~~~~~~~i~~~L~~~p~~R~---t~~e~l~~~~~~~~~~ 226 (351)
....++++.++|.+||..||.+|+ ++.+++.||||....+
T Consensus 209 ~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 209 PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence 011235678999999999999997 5799999999987644
No 497
>KOG1243|consensus
Probab=98.23 E-value=2.2e-06 Score=84.19 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=77.7
Q ss_pred EE-EEEEeecCcEEEEEEecchhh-hhHHHHHHHHHHHHhCCCCCCCCcceeeeeeeEeeCCeEEEEEecc-CCCHHHHH
Q psy2006 12 VC-TNVVYEVDSVVALKIIKNVEK-YREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFL 88 (351)
Q Consensus 12 V~-~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~h~~~~g~~~Iv~l~~~f~~~~~~~lV~E~~-g~sL~~~l 88 (351)
|| .|..+.++.+|.+.+++..+. ..+-+.+-++-|+.++|++ |+++++.++..+++|||+|-+ + |..++
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~------Il~yL~t~e~~~~~ylvTErV~P--l~~~l 98 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPN------ILSYLDTTEEEGTLYLVTERVRP--LETVL 98 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCch------hhhhhhhhcccCceEEEeecccc--HHHHH
Confidence 55 467778999999999987543 1234566778899999888 999999999999999999988 4 33444
Q ss_pred HhcCCCCCchHHHHHHHHHHHHhhhcCCCCCchHHHHHHhHhHHhhhhccc-cccccccccCCCCeEEe
Q psy2006 89 KENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN-KKKREVRRVRRCDIRLI 156 (351)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lH-~~~i~h~d~k~~ni~l~ 156 (351)
++.. ...+.-- +.|++.||.||| +.+++|+++.-..|.+.
T Consensus 99 k~l~-----~~~v~~G-----------------------l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn 139 (690)
T KOG1243|consen 99 KELG-----KEEVCLG-----------------------LFQILAALSFLNDDCNLVHGNVCKDSVFVN 139 (690)
T ss_pred HHhH-----HHHHHHH-----------------------HHHHHHHHHHHhccCCeeeccEeeeeEEEc
Confidence 4432 2223333 445555599997 56789998765544443
No 498
>KOG0582|consensus
Probab=98.22 E-value=1.6e-06 Score=81.05 Aligned_cols=80 Identities=30% Similarity=0.444 Sum_probs=58.0
Q ss_pred CCCCeEEeecCCcccC-CCCc------ccccCCCCccCCccccCC-----------------------------------
Q psy2006 149 RRCDIRLIDFGSATFD-DEHH------STIVSTRHYRAPERYMAS----------------------------------- 186 (351)
Q Consensus 149 k~~ni~l~Dfg~s~~~-~~~~------~~~~~~~~~~~pe~~~~~----------------------------------- 186 (351)
..++|+|+|||.+... +... ..+.||+.|++||.++..
T Consensus 161 ~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv 240 (516)
T KOG0582|consen 161 SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV 240 (516)
T ss_pred CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH
Confidence 3789999999998651 1111 346899999999963211
Q ss_pred --------C------hhhH-------HHHHHHHHHhhccCCCCCCChhhhhcCCCCCCCCchh
Q psy2006 187 --------D------DEEH-------RQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228 (351)
Q Consensus 187 --------~------~~~~-------~~~~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~~ 228 (351)
+ .... -.+..+|..||.+||.+|||++++|.|+||+......
T Consensus 241 Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 241 LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence 0 0011 2366899999999999999999999999998755433
No 499
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.22 E-value=3.2e-06 Score=84.71 Aligned_cols=33 Identities=33% Similarity=0.678 Sum_probs=29.5
Q ss_pred HHHHHHhhccCCCCCCChhhhhcCCCCCCCCch
Q psy2006 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSS 227 (351)
Q Consensus 195 ~~~i~~~L~~~p~~R~t~~e~l~~~~~~~~~~~ 227 (351)
++||.+||.+||.+|+|+.++|+||||+.....
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 379999999999999999999999999875543
No 500
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.21 E-value=1.7e-06 Score=80.47 Aligned_cols=78 Identities=27% Similarity=0.417 Sum_probs=58.9
Q ss_pred CCCeEEeecCCcccC---CCCcccccCCCCccCCccccCC----------------------------------------
Q psy2006 150 RCDIRLIDFGSATFD---DEHHSTIVSTRHYRAPERYMAS---------------------------------------- 186 (351)
Q Consensus 150 ~~ni~l~Dfg~s~~~---~~~~~~~~~~~~~~~pe~~~~~---------------------------------------- 186 (351)
.++++|+|||+++.. ........||+.|++||.+...
T Consensus 132 ~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 132 EGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred CCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 456999999998753 2223446799999999954321
Q ss_pred ----ChhhHHHHHHHHHHhhccCCCCCCCh------hhhhcCCCCCCCCch
Q psy2006 187 ----DDEEHRQLFDLISKMLEYEPSERISL------SEALRHPFFDKLPSS 227 (351)
Q Consensus 187 ----~~~~~~~~~~~i~~~L~~~p~~R~t~------~e~l~~~~~~~~~~~ 227 (351)
....++++.++|.+||..||.+|+++ ++++.||||....+.
T Consensus 212 ~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~ 262 (320)
T cd05590 212 EVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWE 262 (320)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHH
Confidence 00123567899999999999999998 899999999887654
Done!