RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2006
(351 letters)
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 209 bits (533), Expect = 2e-65
Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 20/170 (11%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+KI+KNV++Y EAAR EI L+ + DPN CV+ML+WF++HGH+CI FE+LGLS
Sbjct: 43 VAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 102
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRH--------MSYQL 131
+DF+KEN +LP+ LD +R M+YQ+ + N + H + Q
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--------LTHTDLKPENILFVQS 154
Query: 132 IYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
Y YN K KR+ R + DI+++DFGSAT+DDEHHST+VSTRHYRAPE
Sbjct: 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPE 204
Score = 161 bits (409), Expect = 6e-47
Identities = 69/125 (55%), Positives = 82/125 (65%), Gaps = 24/125 (19%)
Query: 249 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
R + DI+++DFGSAT+DDEHHST+VSTRHYRAPEVIL LGW+QPCDVWSIGCI+ E Y
Sbjct: 169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 228
Query: 309 LGITL-----------------------MARK-TKTKYFYHGKLDWDEKGTAGRYVRENC 344
LG T+ M +K K KYF+H +LDWDE +AGRYV C
Sbjct: 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288
Query: 345 KPLHH 349
KPL
Sbjct: 289 KPLKE 293
Score = 67.3 bits (165), Expect = 1e-12
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 181 ERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
+ +M S D EH +LFDLI KMLEY+P++RI+L EAL+HPFFD L S+
Sbjct: 292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 206 bits (526), Expect = 4e-64
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 20/172 (11%)
Query: 22 SVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81
S VALKII+NV KYREAARLEIN L+KI EKD + LCV M DWF++HGHMCIAFE+LG
Sbjct: 46 SQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG 105
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYA----KENNYLPYSLDQVRH--------MSY 129
+ F+FLKENN+ PY L VRHM+YQL +A EN + H +
Sbjct: 106 KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--------LTHTDLKPENILFV 157
Query: 130 QLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+ YN K E + V+ IR+ DFGSATFD EHH+TIV+TRHYR PE
Sbjct: 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPE 209
Score = 155 bits (393), Expect = 2e-44
Identities = 71/140 (50%), Positives = 85/140 (60%), Gaps = 24/140 (17%)
Query: 233 QTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWA 292
++ + + + S + V+ IR+ DFGSATFD EHH+TIV+TRHYR PEVILELGWA
Sbjct: 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWA 217
Query: 293 QPCDVWSIGCIIFELYLGITL-----------------------MARK-TKTKYFYHGKL 328
QPCDVWSIGCI+FE Y G TL M + K KYFY G L
Sbjct: 218 QPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL 277
Query: 329 DWDEKGTAGRYVRENCKPLH 348
WDE + GRYV+ENCKPL
Sbjct: 278 VWDENSSDGRYVKENCKPLK 297
Score = 65.8 bits (161), Expect = 3e-12
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 159 GSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRH 218
G +D+ + + + YM D EH QLFDL+ +MLE++P++RI+L+EAL H
Sbjct: 275 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334
Query: 219 PFFDKLPSSVRVHAQTQADR 238
PFF L R ++
Sbjct: 335 PFFAGLTPEERSFHTSRNPS 354
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 201 bits (512), Expect = 6e-62
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
A+K+++N++KY +A++E + L+KI D N + VK F Y+ HMC+ FE LG S
Sbjct: 63 YAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN-IVKYHGKFMYYDHMCLIFEPLGPS 121
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYA--------------KENNYLPYSLDQVRHMSY 129
+++ + NNY + ++ ++ +++ A K N L + +
Sbjct: 122 LYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL------LDDPYF 175
Query: 130 QLIY--AVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+ + KK ++ R + I+LIDFG ATF ++H +I++TR YRAPE
Sbjct: 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPE 229
Score = 143 bits (363), Expect = 5e-40
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 31/142 (21%)
Query: 238 RILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDV 297
R ++ + + R + I+LIDFG ATF ++H +I++TR YRAPEVIL LGW D+
Sbjct: 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDM 242
Query: 298 WSIGCIIFELYLGITL---------------------------MARKTKTKYFYHG--KL 328
WS GC++ ELY G L + +KY KL
Sbjct: 243 WSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKL 302
Query: 329 DWDEKGTAGRYVR--ENCKPLH 348
W E ++ ++ + C PL+
Sbjct: 303 AWPENASSINSIKHVKKCLPLY 324
Score = 57.7 bits (140), Expect = 1e-09
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 172 VSTRHYRAPERYM--ASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD 222
S+ + + +H D + +L+ +P+ R S +E L+H F +
Sbjct: 308 ASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 179 bits (455), Expect = 3e-53
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 21 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
VA+KIIKN + + A++E+ L+ + + D ++ V + F + H+C+ FE+L
Sbjct: 79 QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140
+++D L+ N+ SL+ R + Q+ A L + +I+ D
Sbjct: 139 SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA---------LLFLATPELSIIHC-DL--- 185
Query: 141 KKRE---VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
K E + +R I+++DFGS+ + + +R YR+PE
Sbjct: 186 -KPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 228
Score = 119 bits (301), Expect = 6e-31
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 24/124 (19%)
Query: 252 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
+R I+++DFGS+ + + +R YR+PEV+L + + D+WS+GCI+ E++ G
Sbjct: 196 KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
Query: 312 TL-----------------------MARK-TKTKYFYHGKLDWDEKGTAGRYVRENCKPL 347
L + + K + F+ D + + KP
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 348 HHSP 351
Sbjct: 316 GTRK 319
Score = 58.2 bits (141), Expect = 1e-09
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 16/104 (15%)
Query: 122 DQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+++ ++ L D + K R + + G
Sbjct: 293 EKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGE-------------- 338
Query: 182 RYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225
++ + DLI +ML+Y+P RI AL+H FF K
Sbjct: 339 --SGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 178 bits (453), Expect = 2e-52
Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 21 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
VALK+++N +++ A EI L+ + ++D + + ML+ F + H+C+ FE+L
Sbjct: 122 HQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHM-SYQLIYAVDYNN 139
+++++ +K+N + +SL VR ++ ++ + + ++I+ D
Sbjct: 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQC------------LDALHKNRIIHC-DL-- 226
Query: 140 KKKRE---VRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
K E +++ R I++IDFGS+ ++ + T + +R YRAPE
Sbjct: 227 --KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPE 269
Score = 120 bits (303), Expect = 5e-31
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 28/126 (22%)
Query: 252 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
R I++IDFGS+ ++ + T + +R YRAPEVIL + P D+WS+GCI+ EL G
Sbjct: 237 GRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
Query: 312 TL-----------------------MARK-TKTKYFYHGKLD----WDEKGTAGRYVREN 343
L + + K F K + G V
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNG 356
Query: 344 CKPLHH 349
+
Sbjct: 357 GRSRRG 362
Score = 64.0 bits (156), Expect = 2e-11
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 184 MASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADR 238
A + D + + LE++P+ R++ +ALRHP+ + +T R
Sbjct: 375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTSVKR 429
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 162 bits (412), Expect = 4e-47
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPN-----GRHLCVKMLDWFDYHG----HMC 74
VA+KI++ + Y EAA EI LQ++ + D G + +K+LD F++ G H+
Sbjct: 47 VAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVV 106
Query: 75 IAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134
+ FE+LG ++ +K+ + L V+ +S QL+ LD + H +I+
Sbjct: 107 MVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG---------LDYM-HRRCGIIHT 156
Query: 135 VD---YNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
D N + I++ D G+A + DEH++ + TR YR+PE
Sbjct: 157 -DIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPE 205
Score = 113 bits (285), Expect = 8e-29
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 230 VHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL 289
+H + + +L + I++ D G+A + DEH++ + TR YR+PEV+L
Sbjct: 154 IHTDIKPENVLMEIVD---SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 290 GWAQPCDVWSIGCIIFELYLGITL 313
W D+WS C+IFEL G L
Sbjct: 211 PWGCGADIWSTACLIFELITGDFL 234
Score = 63.6 bits (155), Expect = 2e-11
Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 163 FDDE-HHSTIVSTRHYRAPE---RYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRH 218
F+ I + + + +E +++ D +S ML+ +P +R + H
Sbjct: 275 FNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334
Query: 219 PFF 221
P+
Sbjct: 335 PWL 337
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 160 bits (407), Expect = 3e-46
Identities = 65/308 (21%), Positives = 113/308 (36%), Gaps = 74/308 (24%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPN--GRHLCVKMLDWFDYHG----HMCIAF 77
VA+K++K+ E Y E A EI L+ + DPN R + V++LD F G H+C+ F
Sbjct: 65 VAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVF 124
Query: 78 EILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
E+LG + ++ ++NY L V+ + Q++ +DY
Sbjct: 125 EVLGHHLLKWIIKSNYQGLPLPCVK-----------------------KIIQQVLQGLDY 161
Query: 138 NNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDL 197
+ +C I D I L +
Sbjct: 162 LH---------TKCRIIHTDI--------KPENI----------------------LLSV 182
Query: 198 ISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIR 257
+ + +E + P S+ A L + + ++
Sbjct: 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEP------KNAEKLKVK 236
Query: 258 LIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARK 317
+ D G+A + +H + + TR YR+ EV++ G+ P D+WS C+ FEL G L
Sbjct: 237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 318 TKTKYFYH 325
+ +Y
Sbjct: 297 SGEEYTRD 304
Score = 53.4 bits (128), Expect = 4e-08
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 163 FDDE----HHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRH 218
F + H + + + EE D + MLE P +R + +E LRH
Sbjct: 333 FTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392
Query: 219 PFFD 222
P+ +
Sbjct: 393 PWLN 396
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 68.9 bits (169), Expect = 2e-13
Identities = 48/259 (18%), Positives = 83/259 (32%), Gaps = 89/259 (34%)
Query: 24 VALKII--KNVEKYREAA-----RLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76
VA+K + + + E +E+ L+K+ +++LDWF+ +
Sbjct: 71 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG----VIRLLDWFERPDSFVLI 126
Query: 77 FEILGLS--VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134
E +FDF+ E L +E + R +Q++ A
Sbjct: 127 LERPEPVQDLFDFITERGAL-----------------QE--------ELARSFFWQVLEA 161
Query: 135 VDYNNKKKREVRR----------VRRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPE-- 181
V + + + R + R +++LIDFG A D ++ TR Y PE
Sbjct: 162 VRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 220
Query: 182 ---RYMAS---------------------DDEE-------------HRQLFDLISKMLEY 204
RY + +E + LI L
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 280
Query: 205 EPSERISLSEALRHPFFDK 223
PS+R + E HP+
Sbjct: 281 RPSDRPTFEEIQNHPWMQD 299
Score = 50.4 bits (121), Expect = 3e-07
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 252 RRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
R +++LIDFG A D ++ TR Y PE I + + VWS+G +++++
Sbjct: 185 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 66.2 bits (162), Expect = 2e-12
Identities = 54/279 (19%), Positives = 89/279 (31%), Gaps = 91/279 (32%)
Query: 24 VALKII-----KNVEKYREAARL--EINALQKIGEKD--PNGRHLCVKMLDWFDYHGHMC 74
VA+K+I ++ E+ L K+G P +++LDWF+
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG----VIRLLDWFETQEGFM 114
Query: 75 IAFE--ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132
+ E + +FD++ E L E R Q++
Sbjct: 115 LVLERPLPAQDLFDYITEKGPL-----------------GE--------GPSRCFFGQVV 149
Query: 133 YAVDYNNKKKREVRR----------VRRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPE 181
A+ + + + V R +RR +LIDFG A DE ++ TR Y PE
Sbjct: 150 AAIQHCHSRGV-VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPE 208
Query: 182 -----RYMAS---------------------DDEE-------------HRQLFDLISKML 202
+Y A + ++ LI + L
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCL 268
Query: 203 EYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241
+PS R SL E L P+ V ++ L+
Sbjct: 269 APKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLA 307
Score = 50.0 bits (120), Expect = 3e-07
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 252 RRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFEL 307
RR +LIDFG A DE ++ TR Y PE I + A P VWS+G +++++
Sbjct: 175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDM 232
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 66.8 bits (163), Expect = 2e-12
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSA-TFDDEHHST-IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A T T V TR+YRAPEVIL +G+ + D+WS+GCI+ E+
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 312 TL 313
L
Sbjct: 261 IL 262
Score = 46.4 bits (110), Expect = 8e-06
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+SKML +P++RIS+ +AL+HP+ +
Sbjct: 334 DLLSKMLVIDPAKRISVDDALQHPYINVW 362
Score = 37.9 bits (88), Expect = 0.004
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 151 CDIRLIDFGSA-TFDDEHHST-IVSTRHYRAPE 181
C ++++DFG A T T V TR+YRAPE
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 65.0 bits (159), Expect = 6e-12
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 254 CDIRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFELY 308
++L DFGSA E + + +R+YRAPE+I G D+WS+GCI E+
Sbjct: 169 GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF--GNQHYTTAVDIWSVGCIFAEMM 226
Query: 309 LG 310
LG
Sbjct: 227 LG 228
Score = 55.8 bits (135), Expect = 7e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+S +L+Y P ER+ EAL HP+FD+L
Sbjct: 293 DLLSALLQYLPEERMKPYEALCHPYFDEL 321
Score = 41.1 bits (97), Expect = 3e-04
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 17/91 (18%)
Query: 106 YQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRR-------------CD 152
++ + ++ +QLI ++ + V R
Sbjct: 113 HRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV--CHRDIKPHNVLVNEADGT 170
Query: 153 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPE 181
++L DFGSA E + + +R+YRAPE
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPE 201
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 65.1 bits (159), Expect = 6e-12
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI-VSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
C ++++DFG A T T V TR+YRAPEVIL +G+ + D+WS+GCI+ E+ G
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
Query: 312 TL 313
L
Sbjct: 224 VL 225
Score = 46.2 bits (110), Expect = 8e-06
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+SKML + S+RIS+ EAL+HP+ +
Sbjct: 297 DLLSKMLVIDASKRISVDEALQHPYINVW 325
Score = 37.0 bits (86), Expect = 0.007
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI-VSTRHYRAPE 181
C ++++DFG A T T V TR+YRAPE
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 64.7 bits (158), Expect = 9e-12
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D + V TR YRAPEVIL + Q D+WS+GCI+ E+ G T
Sbjct: 165 CELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
Query: 313 L 313
L
Sbjct: 225 L 225
Score = 48.1 bits (115), Expect = 2e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
+L+ KML + +R++ EAL HP+F+ L
Sbjct: 286 NLLEKMLVLDAEQRVTAGEALAHPYFESL 314
Score = 39.2 bits (92), Expect = 0.001
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
C+++++DFG A D + V TR YRAPE
Sbjct: 165 CELKILDFGLARQADSEMTGYVVTRWYRAPE 195
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 63.9 bits (156), Expect = 1e-11
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGW-AQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A D + V TR YRAPEVIL Q D+WS+GCI+ E+ G T
Sbjct: 163 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
Query: 313 L 313
L
Sbjct: 223 L 223
Score = 47.7 bits (114), Expect = 2e-06
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ KMLE + +R++ ++AL HPFF+
Sbjct: 284 DLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Score = 38.8 bits (91), Expect = 0.002
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
C+++++DFG A D + V TR YRAPE
Sbjct: 163 CELKILDFGLARHADAEMTGYVVTRWYRAPE 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 63.8 bits (155), Expect = 1e-11
Identities = 17/179 (9%), Positives = 48/179 (26%), Gaps = 18/179 (10%)
Query: 165 DEHHSTIVSTRHYRAPER-YMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFF-- 221
H + + + + + L + I+ + + L F
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKV---MPQGLVISFAMR 180
Query: 222 -----DKLPSSVRVHAQTQADRIL--SSVSSLVMRRVRRCDIRLIDFGSATF-----DDE 269
+++ +H + D + + + LID G +
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 270 HHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHGKL 328
+ T ++ E++ W D + + ++ + G + + + G
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLF 299
Score = 45.7 bits (108), Expect = 1e-05
Identities = 27/267 (10%), Positives = 60/267 (22%), Gaps = 92/267 (34%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEK-DPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 81
LK+ K A E ++ E+ P+ +H+ +K + + E+
Sbjct: 98 FVLKVQK------PANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSY 151
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY---- 137
++ + + K V + +++Y ++
Sbjct: 152 GTLLNAINL--------------------YKNTPEKVMPQGLVISFAMRMLYMIEQVHDC 191
Query: 138 ---------------NNKKKREVRRVRRCDIRLIDFGSATF-----DDEHHSTIVSTRHY 177
N +++ + LID G + + T +
Sbjct: 192 EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGF 251
Query: 178 RAPE--------------------------RYMASDDEEHRQLF--------------DL 197
+ E YM +E +
Sbjct: 252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEF 311
Query: 198 ISKMLEYEPSERISLSEALRHPFFDKL 224
ML + + LR
Sbjct: 312 FHVMLNIPDCHHLPSLDLLRQKLKKVF 338
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 62.7 bits (153), Expect = 3e-11
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 254 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLGIT 312
C+++++DFG A + + V+TR YRAPE++L + Q D+WS+GCI+ EL G T
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 313 L 313
L
Sbjct: 229 L 229
Score = 47.7 bits (114), Expect = 3e-06
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ KML + +RI+ ++AL H +F +
Sbjct: 290 DLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Score = 38.1 bits (89), Expect = 0.003
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 151 CDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
C+++++DFG A + + V+TR YRAPE
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPE 199
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 62.7 bits (153), Expect = 4e-11
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI-VSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFELYLG 310
DI + DF A + + T V+ R YRAPE++++ G+ + D+WS GC++ E++
Sbjct: 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230
Query: 311 ITL 313
L
Sbjct: 231 KAL 233
Score = 48.1 bits (115), Expect = 2e-06
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DLI+KMLE+ P RIS +ALRHP+F+ L
Sbjct: 295 DLIAKMLEFNPQRRISTEQALRHPYFESL 323
Score = 37.7 bits (88), Expect = 0.004
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI-VSTRHYRAPE 181
DI + DF A + + T V+ R YRAPE
Sbjct: 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 62.1 bits (151), Expect = 5e-11
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 254 CDIRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFELY 308
++L DFGSA E + +R YRAPE++L G + D+WSIGC+ EL
Sbjct: 179 NTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELML--GATEYTPSIDLWSIGCVFGELI 236
Query: 309 LG 310
LG
Sbjct: 237 LG 238
Score = 55.1 bits (133), Expect = 1e-08
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ ++L YEP RI+ EA+ HPFFD L
Sbjct: 300 DLLEQILRYEPDLRINPYEAMAHPFFDHL 328
Score = 38.2 bits (89), Expect = 0.003
Identities = 38/206 (18%), Positives = 65/206 (31%), Gaps = 53/206 (25%)
Query: 12 VCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71
VC E ALK + +Y R E++ ++ + N +K++D+F G
Sbjct: 23 VCEVFDIESGKRFALKKVLQDPRY--KNR-ELDIMKVL--DHVN----IIKLVDYFYTTG 73
Query: 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMS-----------------YQLIYAKEN 114
+NN + V ++++ +
Sbjct: 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIR 133
Query: 115 NYLPYSLDQVRHMSYQLIYAVDY--------------N---NKKKREVRRVRRCDIRLID 157
+ ++ + YQL AV + N N K ++L D
Sbjct: 134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD--------NTLKLCD 185
Query: 158 FGSA--TFDDEHHSTIVSTRHYRAPE 181
FGSA E + +R YRAPE
Sbjct: 186 FGSAKKLIPSEPSVAYICSRFYRAPE 211
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 61.9 bits (151), Expect = 5e-11
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI-----VSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFE 306
CD+++ DFG A D +H T V+TR YRAPE++L G+ + D+WS+GCI+ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 307 LYLGITL 313
+ +
Sbjct: 225 MLSNRPI 231
Score = 47.7 bits (114), Expect = 3e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ KML + P +RI + +AL HP+ ++
Sbjct: 292 DLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
Score = 37.6 bits (88), Expect = 0.004
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI-----VSTRHYRAPE 181
CD+++ DFG A D +H T V+TR YRAPE
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 62.0 bits (151), Expect = 6e-11
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 254 CDIRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFELY 308
++L DFGSA E + + + +R+YRAPE+I G DVWS GC++ EL
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF--GATDYTSSIDVWSAGCVLAELL 251
Query: 309 LG 310
LG
Sbjct: 252 LG 253
Score = 56.6 bits (137), Expect = 4e-09
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
L S++LEY P+ R++ EA H FFD+L
Sbjct: 315 ALCSRLLEYTPTARLTPLEACAHSFFDEL 343
Score = 40.8 bits (96), Expect = 5e-04
Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 49/188 (26%)
Query: 12 VCTNVVYEVDSVVALKIIKNVEKY--REAARLEINALQKIGEKDPNGRHLCVKMLDWFDY 69
V + + +VA+K + +++ RE L+I ++K+ N V++ +F Y
Sbjct: 70 VYQAKLCDSGELVAIKKVLQDKRFKNRE---LQI--MRKL--DHCN----IVRLRYFF-Y 117
Query: 70 HGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSY 129
L L V D++ E Y R + Y++ LP + V+ Y
Sbjct: 118 SSGEKKDEVYLNL-VLDYVPETVY--------RVARH---YSRAKQTLP--VIYVKLYMY 163
Query: 130 QLIYAVDYNNKKKREVRRV-------------RRCDI-RLIDFGSA--TFDDEHHSTIVS 173
QL ++ Y + + + +L DFGSA E + + +
Sbjct: 164 QLFRSLAYIHS-----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 174 TRHYRAPE 181
+R+YRAPE
Sbjct: 219 SRYYRAPE 226
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 61.5 bits (150), Expect = 7e-11
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI-----VSTRHYRAPEVILEL-GWAQPCDVWSIGCIIFE 306
+++ DFG A D + + T+ YR+P ++L + + D+W+ GCI E
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 307 LYLGITL 313
+ G TL
Sbjct: 218 MLTGKTL 224
Score = 46.9 bits (112), Expect = 4e-06
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
D + ++L + P +R++ EAL HP+
Sbjct: 284 DFLEQILTFSPMDRLTAEEALSHPYMSIY 312
Score = 37.3 bits (87), Expect = 0.006
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI-----VSTRHYRAPE 181
+++ DFG A D + + T+ YR+P
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 61.6 bits (150), Expect = 1e-10
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFELYLG 310
++LIDFGSA E + + + +R+YRAPE+I G D+WS GC++ EL G
Sbjct: 181 LKLIDFGSAKILIAGEPNVSYICSRYYRAPELIF--GATNYTTNIDIWSTGCVMAELMQG 238
Score = 56.2 bits (136), Expect = 4e-09
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DLIS++LEY PS R++ EAL HPFFD+L
Sbjct: 300 DLISRLLEYTPSARLTAIEALCHPFFDEL 328
Score = 40.4 bits (95), Expect = 5e-04
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 49/176 (27%)
Query: 24 VALKIIKN--VEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 81
VA+K + K RE L+I ++ + K PN V + +F Y L
Sbjct: 67 VAIKKVLQDKRFKNRE---LQI--MRIV--KHPN----VVDLKAFF-YSNGDKKDEVFLN 114
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141
L V +++ E Y R + YAK +P + ++ YQL+ ++ Y +
Sbjct: 115 L-VLEYVPETVY--------RASRH---YAKLKQTMP--MLLIKLYMYQLLRSLAYIHS- 159
Query: 142 KREVRRV-------------RRCD-IRLIDFGSA--TFDDEHHSTIVSTRHYRAPE 181
+ ++LIDFGSA E + + + +R+YRAPE
Sbjct: 160 ----IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPE 211
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 60.8 bits (148), Expect = 1e-10
Identities = 40/257 (15%), Positives = 71/257 (27%), Gaps = 86/257 (33%)
Query: 23 VVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
+ A+K + K R E+ + +K+G + P CV++ ++ G + + E+
Sbjct: 84 LYAVKRSMSPFRGPKDRARKLAEVGSHEKVG-QHPC----CVRLEQAWEEGGILYLQTEL 138
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHM-SYQLIYA---- 134
G S+ + QV + A + H+ S L++
Sbjct: 139 CGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLA------------LAHLHSQGLVHLDVKP 185
Query: 135 ----VDYNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----RY- 183
+ +L DFG Y APE Y
Sbjct: 186 ANIFLGPRG------------RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYG 233
Query: 184 --------------MA------SDDEEHRQLF-----------------DLISKMLEYEP 206
+A E +QL ++ MLE +P
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDP 293
Query: 207 SERISLSEALRHPFFDK 223
R + L P +
Sbjct: 294 KLRATAEALLALPVLRQ 310
Score = 50.8 bits (122), Expect = 2e-07
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+L DFG Y APE++ + DV+S+G I E+
Sbjct: 195 RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEV 248
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 61.0 bits (148), Expect = 1e-10
Identities = 43/289 (14%), Positives = 86/289 (29%), Gaps = 95/289 (32%)
Query: 24 VALKIIK------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
A+KI+ K E + E+ ++K+ PN ++ + ++ ++C+
Sbjct: 54 RAIKIMNKNKIRQINPKDVERIKTEVRLMKKL--HHPN----IARLYEVYEDEQYICLVM 107
Query: 78 EIL-GLSVFDFLKENN---------------YLPYSLDQVRHMSYQLIYAKENNYLPYSL 121
E+ G + D L P ++ + +E+
Sbjct: 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167
Query: 122 DQVRHMSYQLIYAVDYNNKK-------KRE---VRRVRRCDIRLIDFGSATF-------D 164
+ ++ Q+ A+ Y + + K E + +I+L+DFG + +
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE 227
Query: 165 DEHHSTIVSTRHYRAPE-------RY-MASD-------------------DEEHRQLF-- 195
+T T ++ APE Y D
Sbjct: 228 YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ 287
Query: 196 ---------------------DLISKMLEYEPSERISLSEALRHPFFDK 223
DL+S +L ER AL+HP+ +
Sbjct: 288 VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
Score = 51.0 bits (122), Expect = 2e-07
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 255 DIRLIDFGSATF-------DDEHHSTIVSTRHYRAPEVILELGWA--QPCDVWSIGCIIF 305
+I+L+DFG + + +T T ++ APEV+ + CD WS G ++
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 306 EL 307
L
Sbjct: 268 LL 269
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 59.6 bits (144), Expect = 3e-10
Identities = 31/285 (10%), Positives = 75/285 (26%), Gaps = 72/285 (25%)
Query: 16 VVYEV-----DSVVALKIIKNVEKYR----EAARLEINALQKI-GEKDPNGRHLCVKMLD 65
E + + E+ + + E+ L+ + G K+ + ++ +
Sbjct: 88 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147
Query: 66 WFDYHGHMCIAFEILGLSVF-DFLKENNYLPYSLDQVRHMSY-QLIYAKENNYLPYSLDQ 123
FD I D + + Y Q ++ +++ + + +
Sbjct: 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRV--------RRCDIRLIDFGSATFDDEHHSTIVSTR 175
++ Q+I + + + +R + L F D +R
Sbjct: 208 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-VSSVSR 266
Query: 176 HYRAPE----------------RYMASDD------------------------EEHRQLF 195
+ PE S D +F
Sbjct: 267 GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF 326
Query: 196 -----------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229
L+ L Y +R+ +A+ P +++L + +
Sbjct: 327 RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 371
Score = 52.7 bits (126), Expect = 6e-08
Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 30/209 (14%)
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERY 183
V + + + K EV R+R + + A + + +
Sbjct: 103 VHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQKKKMI 161
Query: 184 MASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK-LPSSVRVHAQTQADRILSS 242
DE + + + + L H K L R+ Q ++
Sbjct: 162 RVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ---VIRL 218
Query: 243 VSSLVMRRV-------------RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILEL 289
++SL + +R + L F D +R + PE+
Sbjct: 219 LASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-VSSVSRGFEPPELEARR 277
Query: 290 GWAQP-----------CDVWSIGCIIFEL 307
D W++G +I+ +
Sbjct: 278 ATISYHRDRRTLMTFSFDAWALGLVIYWI 306
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 59.8 bits (145), Expect = 4e-10
Identities = 42/262 (16%), Positives = 76/262 (29%), Gaps = 89/262 (33%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+K I E + A R E+ L++ ++ PN ++ IA E+ +
Sbjct: 51 VAVKRI-LPECFSFADR-EVQLLRES-DEHPN----VIRYFCTEKDRQFQYIAIELCAAT 103
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD------- 136
+ +++++ ++ + + + Q + H+ I D
Sbjct: 104 LQEYVEQKDF-AHLGLEPITLLQQTTSG------------LAHLHSLNIVHRDLKPHNIL 150
Query: 137 YNNKKKREVRRVRRCDIRLIDFG-SATFDDEHHS-----TIVSTRHYRAPE--------R 182
+ + + DFG HS + T + APE
Sbjct: 151 ISMPNAHGKIKAM-----ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKEN 205
Query: 183 Y-MASD--------------------DEEHRQLF----------------------DLIS 199
D RQ +LI
Sbjct: 206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIE 265
Query: 200 KMLEYEPSERISLSEALRHPFF 221
KM+ +P +R S L+HPFF
Sbjct: 266 KMIAMDPQKRPSAKHVLKHPFF 287
Score = 52.9 bits (127), Expect = 7e-08
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 256 IRLIDFG-SATFDDEHHS-----TIVSTRHYRAPEVILELGWAQP---CDVWSIGCIIFE 306
+ DFG HS + T + APE++ E P D++S GC+ +
Sbjct: 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYY 221
Query: 307 LYLG 310
+
Sbjct: 222 VISE 225
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 58.5 bits (142), Expect = 6e-10
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ DFG T +D + T Y +PE I + + D++++G I+ EL
Sbjct: 160 QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Score = 55.4 bits (134), Expect = 5e-09
Identities = 46/269 (17%), Positives = 80/269 (29%), Gaps = 84/269 (31%)
Query: 17 VYEV-----DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71
V++ +K +K E A E+ AL K+ N V +D
Sbjct: 27 VFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKL--DHVN----IVHYNGCWDGFD 77
Query: 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSY-------QLIYAKENNYLPYSLDQV 124
+ + S + L + M + Q I + L
Sbjct: 78 Y-----DPETSSKNSSRSKTKCL-FIQ-----MEFCDKGTLEQWIEKRRGEKLDK--VLA 124
Query: 125 RHMSYQLIYAVDYNNKKK---REVR-----RVRRCDIRLIDFGSATF--DDEHHSTIVST 174
+ Q+ VDY + KK R+++ V +++ DFG T +D + T
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGT 184
Query: 175 RHYRAPE--------------------------RYMASDDEEH--------------RQL 194
Y +PE A + + ++
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE 244
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDK 223
L+ K+L +P +R + SE LR K
Sbjct: 245 KTLLQKLLSKKPEDRPNTSEILRTLTVWK 273
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 58.4 bits (142), Expect = 8e-10
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 253 RCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFEL 307
+RLID+G A F + ++ V++R+++ PE++ + + D+WS+GC++ +
Sbjct: 167 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSLDMWSLGCMLASM 224
Query: 308 YLG 310
Sbjct: 225 IFR 227
Score = 50.7 bits (122), Expect = 3e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
D + K+L Y+ R++ EA+ HP+F +
Sbjct: 298 DFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
Score = 44.2 bits (105), Expect = 3e-05
Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 43/181 (23%)
Query: 12 VCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG 71
V + + V +KI+K V+K + R EI L+ + PN + + D
Sbjct: 52 VFEAINITNNEKVVVKILKPVKKKK-IKR-EIKILENLRG-GPN----IITLADIVKDPV 104
Query: 72 HMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQL 131
A VF+ + ++ YQ + +R Y++
Sbjct: 105 SRTPAL------VFEHVNNTDF---------KQLYQ----------TLTDYDIRFYMYEI 139
Query: 132 IYAVDYNNKKK---REVR------RVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAP 180
+ A+DY + R+V+ +RLID+G A F + ++ V++R+++ P
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199
Query: 181 E 181
E
Sbjct: 200 E 200
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 57.6 bits (140), Expect = 2e-09
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 18/76 (23%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI------------VSTRHYRAPEVILELGWA---QPCDV 297
CD+++ DFG A D+ V+TR YRAPEV+ L A + DV
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM--LTSAKYSRAMDV 206
Query: 298 WSIGCIIFELYLGITL 313
WS GCI+ EL+L +
Sbjct: 207 WSCGCILAELFLRRPI 222
Score = 48.0 bits (115), Expect = 2e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ +ML ++P++RI+ EAL HP+
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTY 312
Score = 33.4 bits (77), Expect = 0.10
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 13/44 (29%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI------------VSTRHYRAPE 181
CD+++ DFG A D+ V+TR YRAPE
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 57.8 bits (140), Expect = 2e-09
Identities = 52/296 (17%), Positives = 89/296 (30%), Gaps = 101/296 (34%)
Query: 16 VVYEV-----DSVVALKIIK----NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDW 66
V A+K+I + +E+ E+ L+++ PN +K+ ++
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH--PN----IMKLYEF 94
Query: 67 FDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
F+ G+ + E+ G +FD + +S
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRKR-------------------------FSEVDAA 129
Query: 126 HMSYQLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATF--DDEHHSTIV 172
+ Q++ + Y +K K E + + +IR+IDFG +T + +
Sbjct: 130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 189
Query: 173 STRHYRAPE----RY-MASD-------------------DEEHRQLF------------- 195
T +Y APE Y D +
Sbjct: 190 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELP 249
Query: 196 ----------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILS 241
DLI KML Y PS RIS +AL H + D +
Sbjct: 250 QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAIL 305
Score = 57.4 bits (139), Expect = 3e-09
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+IR+IDFG +T + + T +Y APEV L + + CDVWS G I++ L
Sbjct: 166 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYIL 220
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 57.4 bits (139), Expect = 2e-09
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+I+++DFG ++F D + T +Y APEV L+ + + CDVWS G I++ L
Sbjct: 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYIL 240
Score = 54.3 bits (131), Expect = 2e-08
Identities = 52/306 (16%), Positives = 97/306 (31%), Gaps = 111/306 (36%)
Query: 16 VVYEV-----DSVVALKIIK--------------NVEKYREAARLEINALQKIGEKDPNG 56
V S A+K+IK N+EK+ E EI+ L+ + PN
Sbjct: 51 EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH--PN- 107
Query: 57 RHLCVKMLDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENN 115
+K+ D F+ + + E G +F+ + +
Sbjct: 108 ---IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---------------------- 142
Query: 116 YLPYSLDQVRHMSYQLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATF- 163
+ ++ Q++ + Y +K K E + +I+++DFG ++F
Sbjct: 143 ---FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 164 -DDEHHSTIVSTRHYRAPE----RY-MASD-------------------DEEHRQLF--- 195
D + T +Y APE +Y D + + +
Sbjct: 200 SKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 196 --------------------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235
+LI ML Y+ ++R + EAL + K +++ Q
Sbjct: 260 EKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKT 319
Query: 236 ADRILS 241
LS
Sbjct: 320 LCGALS 325
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 57.0 bits (138), Expect = 3e-09
Identities = 52/274 (18%), Positives = 87/274 (31%), Gaps = 87/274 (31%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
A+K+I K E+ L+K+ PN +K+ + + I E+
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDH--PN----IMKLFEILEDSSSFYIVGELY 103
Query: 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD--- 136
G +FD + + +S + Q+ + +M I D
Sbjct: 104 TGGELFDEIIKRKR--FSEHDAARIIKQVFSG------------ITYMHKHNIVHRDLKP 149
Query: 137 ----YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----RY-MA 185
+K+K CDI++IDFG +T + + T +Y APE Y
Sbjct: 150 ENILLESKEKD-------CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 186 SD-------------------DEEHRQLF-----------------------DLISKMLE 203
D + + DLI KML
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 204 YEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD 237
+ PS RI+ ++ L HP+ K S + +
Sbjct: 263 FHPSLRITATQCLEHPWIQKYSSETPTISDLPSL 296
Score = 56.6 bits (137), Expect = 4e-09
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
CDI++IDFG +T + + T +Y APEV L + + CDVWS G I++ L
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYIL 215
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 57.0 bits (138), Expect = 3e-09
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
I+++DFG + + + + T +Y APEV L + + CDVWSIG I+F L
Sbjct: 176 ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFIL 230
Score = 56.6 bits (137), Expect = 4e-09
Identities = 45/275 (16%), Positives = 84/275 (30%), Gaps = 100/275 (36%)
Query: 16 VVYEV-----DSVVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWF 67
V A+KII E+ L+ + PN +K+ D+F
Sbjct: 52 EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH--PN----IMKLYDFF 105
Query: 68 DYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRH 126
+ + + E G +FD + ++
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHRMK-------------------------FNEVDAAV 140
Query: 127 MSYQLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATF--DDEHHSTIVS 173
+ Q++ V Y +K K E + + I+++DFG + + + +
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 174 TRHYRAPE----RY-MASD-------------------DEEHRQLF-------------- 195
T +Y APE +Y D + +++
Sbjct: 201 TAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE 260
Query: 196 ---------DLISKMLEYEPSERISLSEALRHPFF 221
DLI +ML+++ RIS +AL HP+
Sbjct: 261 WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 56.6 bits (136), Expect = 4e-09
Identities = 7/61 (11%), Positives = 16/61 (26%), Gaps = 2/61 (3%)
Query: 252 RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL--ELGWAQPCDVWSIGCIIFELYL 309
+ L D + Y E + + + W +G I+ ++
Sbjct: 229 PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288
Query: 310 G 310
Sbjct: 289 L 289
Score = 53.1 bits (127), Expect = 5e-08
Identities = 15/72 (20%), Positives = 25/72 (34%)
Query: 158 FGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALR 217
FG T + S R S + LI + L ++ R+ EA+
Sbjct: 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352
Query: 218 HPFFDKLPSSVR 229
P F +L + +
Sbjct: 353 TPEFLQLQNEIS 364
Score = 47.7 bits (113), Expect = 3e-06
Identities = 26/187 (13%), Positives = 42/187 (22%), Gaps = 23/187 (12%)
Query: 16 VVYEV-----DSVVALKII----KNVEKYREAARLEINALQKIGEKDPN---GRHLCVKM 63
VV+ V ALK+ +N E A ++ + P R +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 64 LDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMS-YQLIYAKENNYLPYSLD 122
D A G D+ N L V + + +
Sbjct: 137 SDAVAVQSQPPFAQLSPGQD--DYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194
Query: 123 QVRHMSYQLIYAVDYNNKKKREVRRV--------RRCDIRLIDFGSATFDDEHHSTIVST 174
+ ++ QLI K + L D +
Sbjct: 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP 254
Query: 175 RHYRAPE 181
Y E
Sbjct: 255 VTYAPRE 261
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 56.0 bits (136), Expect = 4e-09
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DL+S ML ++P++RIS +A+ HP+F L +
Sbjct: 278 IDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQI 311
Score = 47.5 bits (114), Expect = 2e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG A F + V T YRAP+V++ ++ D+WSIGCI E+ G
Sbjct: 158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 312 TL 313
L
Sbjct: 218 PL 219
Score = 36.4 bits (85), Expect = 0.010
Identities = 43/191 (22%), Positives = 70/191 (36%), Gaps = 62/191 (32%)
Query: 16 VVY----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLDW 66
VVY +VALK I+ ++ E A R EI+ L+++ PN V ++D
Sbjct: 36 VVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIR-EISLLKEL--HHPN----IVSLIDV 87
Query: 67 FDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRH 126
H C+ VF+F+ D + + + N Q++
Sbjct: 88 I--HSERCLTL------VFEFM--------EKDLKKVL--------DENKTGLQDSQIKI 123
Query: 127 MSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--ST 170
YQL+ V + ++ R+ ++L DFG A F +
Sbjct: 124 YLYQLLRGVAHCHQ-----HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 171 IVSTRHYRAPE 181
V T YRAP+
Sbjct: 179 EVVTLWYRAPD 189
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 56.2 bits (136), Expect = 4e-09
Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 107/303 (35%)
Query: 23 VVALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78
V A KI+ + K + ++ EI+ + + + V +F+ + + + E
Sbjct: 68 VFAGKIVPKSLLLKPHQREKMSMEISIHRSL--AHQH----VVGFHGFFEDNDFVFVVLE 121
Query: 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
+ S+ + K L + + R+ Q++ Y
Sbjct: 122 LCRRRSLLELHKRRKAL-------------------------TEPEARYYLRQIVLGCQY 156
Query: 138 NNKKKREVRRV-------------RRCDIRLIDFGSAT---FDDEHHSTIVSTRHYRAPE 181
++ RV ++++ DFG AT +D E + T +Y APE
Sbjct: 157 LHR-----NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 211
Query: 182 RYMAS---------------------------DDEEHRQLF------------------- 195
+ S + ++ +
Sbjct: 212 --VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 269
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK--LPSSVRVHAQTQADRILSSVSSLVMRRVRR 253
LI KML+ +P+ R +++E L FF +P+ + + T R + SSL +
Sbjct: 270 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKP 329
Query: 254 CDI 256
+
Sbjct: 330 LTV 332
Score = 51.9 bits (125), Expect = 1e-07
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 254 CDIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E + T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 178 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 55.7 bits (135), Expect = 5e-09
Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 93/260 (35%)
Query: 24 VALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 81
A K I K + + + EI ++ + PN +++ + F+ + + + E+ G
Sbjct: 37 RAAKKIPKYFVEDVDRFKQEIEIMKSLDH--PN----IIRLYETFEDNTDIYLVMELCTG 90
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKK 141
+F+ + + + ++ AV Y +K
Sbjct: 91 GELFERVVHKRV-------------------------FRESDAARIMKDVLSAVAYCHKL 125
Query: 142 -------KRE----VRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----RY- 183
K E + ++LIDFG A + T V T +Y +P+ Y
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYG 185
Query: 184 MASD-------------------DEEHRQLF-----------------------DLISKM 201
D ++ LI ++
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRL 245
Query: 202 LEYEPSERISLSEALRHPFF 221
L P +RI+ +AL H +F
Sbjct: 246 LTKSPKQRITSLQALEHEWF 265
Score = 52.2 bits (126), Expect = 6e-08
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++LIDFG A + T V T +Y +P+V LE + CD WS G +++ L
Sbjct: 147 PLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVL 200
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 55.3 bits (134), Expect = 6e-09
Identities = 47/262 (17%), Positives = 79/262 (30%), Gaps = 89/262 (33%)
Query: 24 VALKII--KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80
+K I + E EI L+ + PN +K+ + F+ + +M I E
Sbjct: 50 RVIKTINKDRSQVPMEQIEAEIEVLKSLDH--PN----IIKIFEVFEDYHNMYIVMETCE 103
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140
G + + I + + S V + Q++ A+ Y +
Sbjct: 104 GGELLER---------------------IVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 141 K-------KRE----VRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----RY 183
+ K E I++IDFG A DEH + T Y APE
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 184 -MASD-------------------DEEHRQLF----------------------DLISKM 201
D ++ DL+ +M
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQM 262
Query: 202 LEYEPSERISLSEALRHPFFDK 223
L +P R S ++ L H +F +
Sbjct: 263 LTKDPERRPSAAQVLHHEWFKQ 284
Score = 52.2 bits (126), Expect = 6e-08
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
I++IDFG A DEH + T Y APEV + CD+WS G +++ L
Sbjct: 165 PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFL 218
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 56.2 bits (135), Expect = 6e-09
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 12/110 (10%)
Query: 253 RCDIRLIDFG-SATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
R ++ID G + D + V T Y APE++ + + D WS G + FE G
Sbjct: 160 RLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
Query: 311 ---------ITLMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKPLHHSP 351
K + K H + D G ++ P H S
Sbjct: 220 FRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV-KFSSVLPTPNHLSG 268
Score = 37.0 bits (85), Expect = 0.010
Identities = 34/180 (18%), Positives = 55/180 (30%), Gaps = 50/180 (27%)
Query: 24 VALKII--KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80
VA+K + K RE LEI ++K+ PN V + D + L
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKL--NHPN----VVSAREVPDGLQKLAPNDLPLL 95
Query: 81 ------GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYA 134
G + +L + N +R + + A
Sbjct: 96 AMEYCEGGDLRKYLNQFE----------------------NCCGLKEGPIRTLLSDISSA 133
Query: 135 VDYNNKK-------KRE----VRRVRRCDIRLIDFG-SATFDDEHH-STIVSTRHYRAPE 181
+ Y ++ K E +R ++ID G + D + V T Y APE
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
Score = 33.1 bits (75), Expect = 0.15
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
+ ML + +R + + F L
Sbjct: 276 RWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 56.6 bits (136), Expect = 6e-09
Identities = 61/310 (19%), Positives = 98/310 (31%), Gaps = 110/310 (35%)
Query: 23 VVALKI--IKNVEKYREAARLEINALQKIG----EKDPNGRHLCVKMLDWFDYHG----- 71
V A+ I + E + + R I L IG E PN L +L+ +
Sbjct: 278 VTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPN-TSLPPSILEDSLENNEGVPS 336
Query: 72 HMCIAFEILGLS---VFDFLKE-NNYLPYSLDQVRHMSYQLIYAKENNYL---PYSLDQV 124
M I L+ V D++ + N++LP + + L+ +N + P SL
Sbjct: 337 PM---LSISNLTQEQVQDYVNKTNSHLPAG----KQVEISLVNGAKNLVVSGPPQSL--- 386
Query: 125 RHMSYQLIYAVDYNNKKKREVRRVRRCDI-------RLIDFG------SATFDDEHHSTI 171
Y L N R+ + D R + F ++ F HS
Sbjct: 387 ----YGL-------NLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPF----HS-- 429
Query: 172 VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFD--------K 223
H P ASD DL+ + + + ++ P +D
Sbjct: 430 ----HLLVP----ASD----LINKDLVKNNVSFNAKD-------IQIPVYDTFDGSDLRV 470
Query: 224 LPSSV-----------RVH----AQTQADRIL-------SSVSSLVMRRVRRCDIRLIDF 261
L S+ V Q +A IL S + L R +R+I
Sbjct: 471 LSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVA 530
Query: 262 GS--ATFDDE 269
G+ DD+
Sbjct: 531 GTLDINPDDD 540
Score = 45.0 bits (106), Expect = 3e-05
Identities = 40/226 (17%), Positives = 62/226 (27%), Gaps = 88/226 (38%)
Query: 168 HSTIVSTR-HYRA-------------PERYMASDDEEHRQLFDLISKMLEY-----EPSE 208
H +V T + A P A+DDE +L+ K L Y EPS+
Sbjct: 18 HVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA-ELVGKFLGYVSSLVEPSK 76
Query: 209 RISLSEALR----------------HPFFDKLPSSVR-------------VHAQTQADR- 238
+ L H KL + A+ A R
Sbjct: 77 VGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRP 136
Query: 239 ILSSVSSLVMRRVRRCDIRLID-FG-----SATFDD-----EHHSTIVSTRHYRAPEVIL 287
+S + R V + +L+ FG F++ + + +V + E +
Sbjct: 137 FDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLS 196
Query: 288 ELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHGKLD---W 330
EL D K F G L+ W
Sbjct: 197 ELI-RTTLDA----------------------EKVFTQG-LNILEW 218
Score = 33.1 bits (75), Expect = 0.14
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 18/67 (26%)
Query: 280 YRAPEVILELGWAQPCDVWSIGCIIFELYLGITL---MARKTKTKYFYHGKLDWDEKGTA 336
Y+ + AQ DVW+ F+ G ++ + + G G
Sbjct: 1636 YKTSKA------AQ--DVWNRADNHFKDTYGFSILDIVINNPVNLTIHFG-------GEK 1680
Query: 337 GRYVREN 343
G+ +REN
Sbjct: 1681 GKRIREN 1687
Score = 29.6 bits (66), Expect = 1.8
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Query: 202 LEYE---PSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMR 249
LE+ P+ ++ L+ F LP A D ++ + LV +
Sbjct: 16 LEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAA---DDEPTTPAELVGK 63
Score = 28.5 bits (63), Expect = 4.6
Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 84/271 (30%)
Query: 47 QKIG------EKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQ 100
Q+ G + + + + D H + G S+ D + N P +L
Sbjct: 1627 QEQGMGMDLYKTSKAAQDVWNRA----DNH-----FKDTYGFSILDIVINN---PVNL-- 1672
Query: 101 VRH---MSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLID 157
H + I NY M ++ VD K ++ + +
Sbjct: 1673 TIHFGGEKGKRIRE---NYSA--------MIFE--TIVDGKLKTEKIFKEINEHSTSYTF 1719
Query: 158 FGSATFDDEHHST------IVSTRHYRAPERYMASDDEEHRQLFDLISKM----L-EY-- 204
+T + +A + + + L + L EY
Sbjct: 1720 RSE---KGLLSATQFTQPALTLME--KAAFEDL-----KSKGLIPADATFAGHSLGEYAA 1769
Query: 205 --EPSERISLSEALRHPFFDKLPSSVRVH-----AQTQADRILSSVSSLVMRRVRRCDIR 257
++ +S+ + ++ V Q R S+ M + +
Sbjct: 1770 LASLADVMSIESLV------EV-----VFYRGMTMQVAVPRDELGRSNYGMIAINPGRV- 1817
Query: 258 LIDFGSATFDDEHHSTIVSTRHYRAPEVILE 288
+A+F E +V R + +E
Sbjct: 1818 -----AASFSQEALQYVVERVGKRTGWL-VE 1842
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 55.3 bits (134), Expect = 7e-09
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 255 DIRLIDFGSATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
I + DFG + + ST T Y APEV+ + +++ D WSIG I + L
Sbjct: 147 KIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL 200
Score = 54.5 bits (132), Expect = 1e-08
Identities = 56/271 (20%), Positives = 87/271 (32%), Gaps = 98/271 (36%)
Query: 16 VVYEV-----DSVVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY 69
V+ V + ALK I K+ + EI L+KI K N V + D ++
Sbjct: 24 EVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI--KHEN----IVTLEDIYES 77
Query: 70 HGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMS 128
H + +++ G +FD + E Y+ +
Sbjct: 78 TTHYYLVMQLVSGGELFDRILERGV-------------------------YTEKDASLVI 112
Query: 129 YQLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATFDDEHH-STIVSTRH 176
Q++ AV Y ++ K E + I + DFG + + ST T
Sbjct: 113 QQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG 172
Query: 177 YRAPE-----RY-MASD-------------------DEEHRQLF---------------- 195
Y APE Y A D +E +LF
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWD 232
Query: 196 -------DLISKMLEYEPSERISLSEALRHP 219
D I +LE +P+ER + +AL HP
Sbjct: 233 DISESAKDFICHLLEKDPNERYTCEKALSHP 263
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 55.4 bits (134), Expect = 7e-09
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++
Sbjct: 169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Score = 52.7 bits (127), Expect = 6e-08
Identities = 50/278 (17%), Positives = 88/278 (31%), Gaps = 89/278 (32%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
A KII K + + E +K+ + PN V++ D + F+++
Sbjct: 57 FAAKIINTKKLSARDFQKLEREARICRKL--QHPN----IVRLHDSIQEESFHYLVFDLV 110
Query: 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD--- 136
G +F+ + + YS H Q++ + + + I +
Sbjct: 111 TGGELFEDIVAREF--YSEADASHCIQQILES------------IAYCHSNGIVHRNLKP 156
Query: 137 ----YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE-----RY-M 184
+K K ++L DFG A D E T Y +PE Y
Sbjct: 157 ENLLLASKAKGA-------AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 185 ASD-------------------DEEHRQLF-----------------------DLISKML 202
D DE+ +L+ LI ML
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 269
Query: 203 EYEPSERISLSEALRHPFF-DKLPSSVRVHAQTQADRI 239
P +RI+ +AL+ P+ ++ + +H Q D +
Sbjct: 270 TVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCL 307
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 55.3 bits (134), Expect = 8e-09
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
DL++ MLE +P +RIS AL HP+F
Sbjct: 296 LDLLTAMLEMDPVKRISAKNALEHPYFSHND 326
Score = 48.0 bits (115), Expect = 2e-06
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
+++ DFG A F + + T YR PE++L ++ D+WSI CI E+ +
Sbjct: 176 LKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 312 TLM 314
L
Sbjct: 236 PLF 238
Score = 35.7 bits (83), Expect = 0.018
Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 59/192 (30%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
VY + VA+K I+ +E E A R E++ L+++ + N +++
Sbjct: 49 EVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIR-EVSLLKEL--QHRN----IIELKS 100
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
H + + +F++ D ++M + S+ ++
Sbjct: 101 VI--HHNHRLHL------IFEYA--------ENDLKKYM---------DKNPDVSMRVIK 135
Query: 126 HMSYQLIYAVDY-------------NNKKKREVRRVRRCDIRLIDFGSA-TFDDEHH--S 169
YQLI V++ N +++ DFG A F +
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 170 TIVSTRHYRAPE 181
+ T YR PE
Sbjct: 196 HEIITLWYRPPE 207
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 55.3 bits (134), Expect = 8e-09
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSV 228
DL++K+L++E RIS +A++HPFF L +
Sbjct: 259 ADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
Score = 47.6 bits (114), Expect = 3e-06
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG A V T YR P+++L ++ D+W +GCI +E+ G
Sbjct: 139 LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
Query: 312 TLM 314
L
Sbjct: 199 PLF 201
Score = 28.3 bits (64), Expect = 4.0
Identities = 38/192 (19%), Positives = 70/192 (36%), Gaps = 64/192 (33%)
Query: 16 VVYEV-----DSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
VY+ D++VALK I+ + E A R E++ L+ + K N V + D
Sbjct: 17 TVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIR-EVSLLKDL--KHAN----IVTLHD 67
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
H + VF++L D +++ ++ ++ V+
Sbjct: 68 II--HTEKSLTL------VFEYL--------DKDLKQYL--------DDCGNIINMHNVK 103
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--S 169
+QL+ + Y ++ ++V R +++L DFG A
Sbjct: 104 LFLFQLLRGLAYCHR-----QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158
Query: 170 TIVSTRHYRAPE 181
V T YR P+
Sbjct: 159 NEVVTLWYRPPD 170
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 55.4 bits (134), Expect = 8e-09
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
+++ DFG + T+ T Y APE++ + D+WS+G I +
Sbjct: 189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITY 241
Score = 50.4 bits (121), Expect = 4e-07
Identities = 49/272 (18%), Positives = 87/272 (31%), Gaps = 100/272 (36%)
Query: 16 VVYEV-----DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 70
+VY ALK++K ++ R EI L ++ PN +K+ + F+
Sbjct: 68 IVYRCKQKGTQKPYALKVLKK-TVDKKIVRTEIGVLLRL--SHPN----IIKLKEIFETP 120
Query: 71 GHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSY 129
+ + E++ G +FD + E Y YS
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGY-------------------------YSERDAADAVK 155
Query: 130 QLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRH 176
Q++ AV Y ++ K E +++ DFG + T+ T
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPG 215
Query: 177 YRAPE-----RYMA---------------------SDDEEHRQLF--------------- 195
Y APE Y D+ + +F
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWW 275
Query: 196 --------DLISKMLEYEPSERISLSEALRHP 219
DL+ K++ +P +R++ +AL+HP
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 55.4 bits (133), Expect = 1e-08
Identities = 27/283 (9%), Positives = 71/283 (25%), Gaps = 69/283 (24%)
Query: 16 VVYEV-----DSVVALKII----KNVEKYREAARLEINALQKI-GEKDPNGRHLCVKMLD 65
E + + + + + E+ L+ + G K+ + ++ +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 66 WFDYHGHMCIAFEI-LGLSVFDFLKENNYLPYSLDQVRHMSY-QLIYAKENNYLPYSLDQ 123
FD I + L D + + Y Q ++ +++ + + +
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRV--------RRCDIRLIDFGSATFDDEHHSTI---- 171
++ Q+I + + + +R + L F D +
Sbjct: 213 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRG 272
Query: 172 VSTRHYRAPERYMASDDEEHRQLF------------------------------------ 195
+ A F
Sbjct: 273 FAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS 332
Query: 196 ---------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVR 229
L+ L Y +R+ +A+ P +++L + +
Sbjct: 333 CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
Score = 47.4 bits (112), Expect = 4e-06
Identities = 28/188 (14%), Positives = 54/188 (28%), Gaps = 21/188 (11%)
Query: 140 KKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLIS 199
+ K EV R+R + + A + + + DE +
Sbjct: 124 QMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF 182
Query: 200 KMLEYEPSERISLSEALRHPFFDK-LPSSVRVHAQTQADRILSSVSS--LVMRRV----- 251
+ + + L H K L R+ Q R+L+S+ LV +
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI 242
Query: 252 ---RRCDIRLIDFGSATFDDEHHSTI----VSTRHYRAPEVILELGWAQ-----PCDVWS 299
+R + L F D + + A ++ D W+
Sbjct: 243 VLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302
Query: 300 IGCIIFEL 307
+G I+ +
Sbjct: 303 LGLAIYWI 310
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 54.8 bits (133), Expect = 1e-08
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
DL+ +L+ P +RIS EAL+HP+F
Sbjct: 260 RDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
Score = 46.0 bits (110), Expect = 7e-06
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELY 308
++L +FG A F S V T YR P+V+ ++ D+WS GCI EL
Sbjct: 140 LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
Score = 36.0 bits (84), Expect = 0.014
Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 63/192 (32%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
V+ E +VALK ++ ++ E A R EI L+++ K N V++ D
Sbjct: 17 TVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALR-EICLLKEL--KHKN----IVRLHD 68
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
H + VF+F D ++ ++ + V+
Sbjct: 69 VL--HSDKKLTL------VFEFC--------DQDLKKYF--------DSCNGDLDPEIVK 104
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--S 169
+QL+ + + + R V R +++L +FG A F S
Sbjct: 105 SFLFQLLKGLGFCHS-----RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159
Query: 170 TIVSTRHYRAPE 181
V T YR P+
Sbjct: 160 AEVVTLWYRPPD 171
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 54.8 bits (133), Expect = 1e-08
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
L+S+ML Y+P++RIS AL HPFF +
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Score = 48.3 bits (116), Expect = 1e-06
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
I+L DFG A F + V T YRAPE++L ++ D+WS+GCI E+
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 312 TL 313
L
Sbjct: 202 AL 203
Score = 38.7 bits (91), Expect = 0.002
Identities = 44/192 (22%), Positives = 67/192 (34%), Gaps = 62/192 (32%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
VVY VVALK I+ ++ E A R EI+ L+++ PN VK+LD
Sbjct: 18 VVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIR-EISLLKEL--NHPN----IVKLLD 69
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
+ + FE +L L + + + L ++
Sbjct: 70 VIHTENKLYLVFE--------------FLHQDLKK---------FMDASALTGIPLPLIK 106
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--S 169
+QL+ + + + RV I+L DFG A F +
Sbjct: 107 SYLFQLLQGLAFCHS-----HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 170 TIVSTRHYRAPE 181
V T YRAPE
Sbjct: 162 HEVVTLWYRAPE 173
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 55.0 bits (133), Expect = 1e-08
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L FG A V T H+ APEV+ + +P DVW G I+F
Sbjct: 171 PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
Score = 55.0 bits (133), Expect = 1e-08
Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 96/285 (33%)
Query: 24 VALKIIK------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
A+KI+ + E + E + + P+ V++L+ + G + + F
Sbjct: 52 FAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH--PH----IVELLETYSSDGMLYMVF 105
Query: 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136
E + G + I + + YS H Q++ A+
Sbjct: 106 EFMDGADLCFE---------------------IVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 137 YNNKK-------KRE----VRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPE- 181
Y + K + ++L FG A V T H+ APE
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 182 ----RY-----------------------MASDDEEHRQL------F------------- 195
Y + + +
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 196 DLISKMLEYEPSERISLSEALRHPFF-DKLPSSVRVHAQTQADRI 239
DL+ +ML +P+ERI++ EAL HP+ ++ + ++H +++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQL 309
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 54.6 bits (132), Expect = 1e-08
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++L DFG A D T V T +Y +PE + + + + D+WS+GC+++EL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 49.6 bits (119), Expect = 5e-07
Identities = 44/268 (16%), Positives = 82/268 (30%), Gaps = 94/268 (35%)
Query: 23 VVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH--GHMCIAF 77
++ K + E ++ E+N L+++ K PN V+ D + I
Sbjct: 33 ILVWKELDYGSMTEAEKQMLVSEVNLLREL--KHPN----IVRYYDRIIDRTNTTLYIVM 86
Query: 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136
E G + + + KE YL + V + QL A+
Sbjct: 87 EYCEGGDLASVITK-------------------GTKERQYLDE--EFVLRVMTQLTLALK 125
Query: 137 YNNKKKREVRRV-------------RRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAP 180
+++ V + +++L DFG A D T V T +Y +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 181 E-----RY---------------MAS-----DDEEHRQLF-------------------- 195
E Y + + ++L
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
++I++ML + R S+ E L +P +
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 55.0 bits (133), Expect = 1e-08
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A + + T Y +PEV+ + + +P D+W+ G I++
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 204
Score = 51.1 bits (123), Expect = 2e-07
Identities = 53/260 (20%), Positives = 85/260 (32%), Gaps = 89/260 (34%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
A II K + + E + + PN V++ D GH + F+++
Sbjct: 39 YAAMIINTKKLSARDHQKLEREARICRLLKH--PN----IVRLHDSISEEGHHYLIFDLV 92
Query: 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD--- 136
G +F+ + Y YS H Q+ L+ V H + +
Sbjct: 93 TGGELFEDIVAREY--YSEADASHCIQQI------------LEAVLHCHQMGVVHRNLKP 138
Query: 137 ----YNNKKKREVRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPE-----RY- 183
+K K ++L DFG A + + T Y +PE Y
Sbjct: 139 ENLLLASKLKGA-------AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 184 MASD-------------------DEEHRQLF-----------------------DLISKM 201
D DE+ +L+ DLI+KM
Sbjct: 192 KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 251
Query: 202 LEYEPSERISLSEALRHPFF 221
L PS+RI+ +EAL+HP+
Sbjct: 252 LTINPSKRITAAEALKHPWI 271
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 54.5 bits (132), Expect = 1e-08
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
L+ L +P+ER++ + L HP+F+ +
Sbjct: 262 LGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292
Score = 53.3 bits (129), Expect = 4e-08
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 252 RRCDIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIF 305
+ I+L DFG A T +++ V+TR YR+PE+++ G Q P DVW+IGC+
Sbjct: 137 KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV--GDTQYGPPVDVWAIGCVFA 194
Query: 306 ELYLGITLM 314
EL G+ L
Sbjct: 195 ELLSGVPLW 203
Score = 41.4 bits (98), Expect = 3e-04
Identities = 38/192 (19%), Positives = 70/192 (36%), Gaps = 63/192 (32%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
VV+ + +VA+K + A R EI L+++ K PN V +L+
Sbjct: 18 VVFKCRNRDTGQIVAIKKFLE-SEDDPVIKKIALR-EIRMLKQL--KHPN----LVNLLE 69
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
F + + FE Y +++ + + V+
Sbjct: 70 VFRRKRRLHLVFE--------------YCDHTV-------LHEL---DRYQRGVPEHLVK 105
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA---TFDDEHHS 169
+++Q + AV++ +K + I+L DFG A T +++
Sbjct: 106 SITWQTLQAVNFCHK-----HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160
Query: 170 TIVSTRHYRAPE 181
V+TR YR+PE
Sbjct: 161 DEVATRWYRSPE 172
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 54.7 bits (132), Expect = 1e-08
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L DFG A E + T +Y +PE+ + D+W++GC+++EL
Sbjct: 163 TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Score = 40.1 bits (94), Expect = 8e-04
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDK 223
I+S Y S D L L+S++ + P +R S++ L F K
Sbjct: 237 IISGSFPPVSLHY--SYD-----LRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 54.5 bits (132), Expect = 1e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236
DL K L +P +R +E L H FF + R + Q
Sbjct: 284 IDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQL 325
Score = 51.8 bits (125), Expect = 1e-07
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 252 RRCDIRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIF 305
+ ++L DFG A T V+TR YRAPE+++ G + DVW+IGC++
Sbjct: 159 QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLV--GDVKYGKAVDVWAIGCLVT 216
Query: 306 ELYLGITLM 314
E+++G L
Sbjct: 217 EMFMGEPLF 225
Score = 38.0 bits (89), Expect = 0.003
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 63/192 (32%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
+V + +VA+K + A R EI L+++ + N V +L+
Sbjct: 40 MVMKCRNKDTGRIVAIKKFLE-SDDDKMVKKIAMR-EIKLLKQL--RHEN----LVNLLE 91
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
+ FE ++ +++ + E V+
Sbjct: 92 VCKKKKRWYLVFE--------------FVDHTI-------LDDL---ELFPNGLDYQVVQ 127
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--S 169
+Q+I + + + + + ++L DFG A T
Sbjct: 128 KYLFQIINGIGFCHS-----HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 170 TIVSTRHYRAPE 181
V+TR YRAPE
Sbjct: 183 DEVATRWYRAPE 194
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 54.1 bits (131), Expect = 1e-08
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A D E T Y +PEV+ + +++P D+W+ G I++
Sbjct: 146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Score = 53.3 bits (129), Expect = 3e-08
Identities = 50/276 (18%), Positives = 87/276 (31%), Gaps = 89/276 (32%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
A KII K + + E +K+ + PN V++ D + F+++
Sbjct: 34 FAAKIINTKKLSARDFQKLEREARICRKL--QHPN----IVRLHDSIQEESFHYLVFDLV 87
Query: 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD--- 136
G +F+ + + YS H Q++ + + + I +
Sbjct: 88 TGGELFEDIVAREF--YSEADASHCIQQILES------------IAYCHSNGIVHRNLKP 133
Query: 137 ----YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE-----RY-M 184
+K K ++L DFG A D E T Y +PE Y
Sbjct: 134 ENLLLASKAKGA-------AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 185 ASD-------------------DEEHRQLF-----------------------DLISKML 202
D DE+ +L+ LI ML
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 203 EYEPSERISLSEALRHPFF-DKLPSSVRVHAQTQAD 237
P +RI+ +AL+ P+ ++ + +H Q D
Sbjct: 247 TVNPKKRITADQALKVPWICNRERVASAIHRQDTVD 282
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 54.7 bits (132), Expect = 1e-08
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 254 CDIRLIDFGSATFDDEHH-STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A ++ T T +Y APEV+ + + CD+WS+G I++
Sbjct: 168 AVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 220
Score = 42.7 bits (101), Expect = 1e-04
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHP 219
LI +L+ +P+ER+++++ + HP
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHP 289
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 54.7 bits (132), Expect = 2e-08
Identities = 51/290 (17%), Positives = 95/290 (32%), Gaps = 93/290 (32%)
Query: 23 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE-IL 80
V K I + + EI+ + ++ P + + D F+ M + E +
Sbjct: 78 VFVAKFINTPYPLDKYTVKNEISIMNQL--HHPK----LINLHDAFEDKYEMVLILEFLS 131
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD---- 136
G +FD + +Y S +V + Q + ++HM I +D
Sbjct: 132 GGELFDRIAAEDY-KMSEAEVINYMRQA------------CEGLKHMHEHSIVHLDIKPE 178
Query: 137 ---YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY----MA 185
KK +++IDFG AT DE +T + APE
Sbjct: 179 NIMCETKKAS--------SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 186 SD-------------------DEEHRQLF-----------------------DLISKMLE 203
+D E+ + D I +L+
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 290
Query: 204 YEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRR 253
EP +R+++ +AL HP+ ++ RI SS + + ++++
Sbjct: 291 KEPRKRLTVHDALEHPW-------LKGDHSNLTSRIPSSRYNKIRQKIKE 333
Score = 49.7 bits (119), Expect = 6e-07
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++IDFG AT DE +T + APE++ D+W+IG + + L
Sbjct: 189 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 243
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 54.1 bits (131), Expect = 2e-08
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
D + +L+ P R+S +AL HP+F +
Sbjct: 271 MDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301
Score = 47.6 bits (114), Expect = 2e-06
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLGI 311
++L DFG A F + S+ V T YRAP+V++ ++ D+WS GCI+ E+ G
Sbjct: 147 LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
Query: 312 TLM 314
L
Sbjct: 207 PLF 209
Score = 29.5 bits (67), Expect = 1.4
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 59/192 (30%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
VY VALK +K ++ E A R EI+ ++++ K N V++ D
Sbjct: 20 TVYKGLNKTTGVYVALKEVK-LDS-EEGTPSTAIR-EISLMKEL--KHEN----IVRLYD 70
Query: 66 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
H + VF+F+ D ++M + + L+ V+
Sbjct: 71 VI--HTENKLTL------VFEFM--------DNDLKKYMDSRTVGNTPR---GLELNLVK 111
Query: 126 HMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--S 169
+ +QL+ + + ++ ++ +R ++L DFG A F + S
Sbjct: 112 YFQWQLLQGLAFCHE-----NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS 166
Query: 170 TIVSTRHYRAPE 181
+ V T YRAP+
Sbjct: 167 SEVVTLWYRAPD 178
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 54.3 bits (131), Expect = 2e-08
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQ-----------PCDVWS 299
++LIDFG A + V T +Y PE I ++ ++ DVWS
Sbjct: 146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205
Query: 300 IGCIIFELYLG 310
+GCI++ + G
Sbjct: 206 LGCILYYMTYG 216
Score = 47.8 bits (114), Expect = 2e-06
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLV 247
D++ L+ +P +RIS+ E L HP+ V A+ + + + LV
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLV 303
Score = 46.6 bits (111), Expect = 6e-06
Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 50/186 (26%)
Query: 16 VVYEVDS----VVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD 68
V++V + + A+K + + + ++ R EI L K+ + + + +++ D+
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL--QQHSDK--IIRLYDYEI 79
Query: 69 YHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMS 128
++ + E + + +LK+ + + +
Sbjct: 80 TDQYIYMVMECGNIDLNSWLKKKKSID-------------------------PWERKSYW 114
Query: 129 YQLIYAVDYNNKKKREVRR--------VRRCDIRLIDFGSATF-----DDEHHSTIVSTR 175
++ AV + + V + ++LIDFG A + V T
Sbjct: 115 KNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 176 HYRAPE 181
+Y PE
Sbjct: 174 NYMPPE 179
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 54.3 bits (131), Expect = 2e-08
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 29/87 (33%)
Query: 254 CDIRLIDFGSA--------------------TFDDEHHSTI----VSTRHYRAPEVILEL 289
C +++ DFG + T + + I V+TR YRAPE++L
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL-- 203
Query: 290 GWA---QPCDVWSIGCIIFELYLGITL 313
G + D+WS+GCI+ E+ G +
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCGKPI 230
Score = 43.9 bits (104), Expect = 5e-05
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+ K+L++ P++RIS ++AL+HPF
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFVSIF 335
Score = 29.3 bits (66), Expect = 1.8
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 24/55 (43%)
Query: 151 CDIRLIDFGSA--------------------TFDDEHHSTI----VSTRHYRAPE 181
C +++ DFG + T + + I V+TR YRAPE
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE 200
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 54.1 bits (131), Expect = 2e-08
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
L+ +ML + P +RIS AL+H + K
Sbjct: 274 AQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304
Score = 53.3 bits (129), Expect = 3e-08
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 256 IRLIDFGSA-TFDDEHHST-IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITL 313
++L DFG A + + T +V T YRAPEV+L+ +A P D+WS+GCI E++ L
Sbjct: 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218
Query: 314 M 314
Sbjct: 219 F 219
Score = 34.9 bits (81), Expect = 0.031
Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 56/194 (28%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYREAARL-------EINALQKIGEKD-PNGRHLCVK 62
VY VALK ++ V E+ L+++ + PN V+
Sbjct: 24 TVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVALLRRLEAFEHPN----VVR 78
Query: 63 MLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLD 122
++D + L VF+ + D ++ + +
Sbjct: 79 LMDVC--ATSRTDREIKVTL-VFEHV--------DQDLRTYL-------DKAPPPGLPAE 120
Query: 123 QVRHMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH 168
++ + Q + +D+ + + ++L DFG A + +
Sbjct: 121 TIKDLMRQFLRGLDFLHA-----NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 169 ST-IVSTRHYRAPE 181
T +V T YRAPE
Sbjct: 176 LTPVVVTLWYRAPE 189
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 54.1 bits (131), Expect = 2e-08
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
DL+ K L + P++RIS AL HP+F L
Sbjct: 274 KDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
Score = 53.0 bits (128), Expect = 5e-08
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA-TFDDEHHST-IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG A + + T +V T YRAPEV+L+ +A P D+WS+GCI E++
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215
Score = 33.3 bits (77), Expect = 0.085
Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 56/193 (29%)
Query: 16 VVY------EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKD-PNGRHLCVKM 63
V+ VALK ++ V+ E R E+ L+ + + PN V++
Sbjct: 26 KVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIR-EVAVLRHLETFEHPN----VVRL 79
Query: 64 LDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQ 123
D L L VF+ + D ++ + +
Sbjct: 80 FDVC--TVSRTDRETKLTL-VFEHV--------DQDLTTYL-------DKVPEPGVPTET 121
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHHS 169
++ M +QL+ +D+ + RV I+L DFG A + +
Sbjct: 122 IKDMMFQLLRGLDFLHS-----HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 170 T-IVSTRHYRAPE 181
T +V T YRAPE
Sbjct: 177 TSVVVTLWYRAPE 189
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 53.7 bits (130), Expect = 2e-08
Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 107/291 (36%)
Query: 23 VVALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78
V A KI+ + K + ++ EI+ + + + V +F+ + + + E
Sbjct: 42 VFAGKIVPKSLLLKPHQREKMSMEISIHRSL--AHQH----VVGFHGFFEDNDFVFVVLE 95
Query: 79 I-LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
+ S+ + K L + + R+ Q++ Y
Sbjct: 96 LCRRRSLLELHKRRKAL-------------------------TEPEARYYLRQIVLGCQY 130
Query: 138 NNKKKREVRRV-------------RRCDIRLIDFGSAT---FDDEHHSTIVSTRHYRAPE 181
++ RV ++++ DFG AT +D E + T +Y APE
Sbjct: 131 LHR-----NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 185
Query: 182 RYMAS---------------------------DDEEHRQLF------------------- 195
+ S + ++ +
Sbjct: 186 --VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 243
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK--LPSSVRVHAQTQADRILSSVS 244
LI KML+ +P+ R +++E L FF +P+ + + T R + S
Sbjct: 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPS 294
Score = 51.4 bits (124), Expect = 1e-07
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG AT +D E + T +Y APEV+ + G + DVWSIGCI++ L +G
Sbjct: 153 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 53.8 bits (130), Expect = 2e-08
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+I++IDFG A D++ T T HY APE++ + G+ + CD+WS+G I++ +
Sbjct: 147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
Score = 46.9 bits (112), Expect = 5e-06
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF--DKLPSSVRVHAQTQADRILSSVSSLV------ 247
DLI +L +P++R+ +S + + SS + ++V + V
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHA 308
Query: 248 MRRVRRCDIRLIDFGSA 264
+ +R L + A
Sbjct: 309 FNKYKREGFCLQNVDKA 325
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 53.5 bits (129), Expect = 2e-08
Identities = 35/284 (12%), Positives = 73/284 (25%), Gaps = 114/284 (40%)
Query: 23 VVALKIIKNVEKYREAARLEINALQKIGEKDPN---------GRHLCVKMLDWFDYHGHM 73
A+K I++ E+ E+ L + R VK + +
Sbjct: 33 YYAIKKIRHTEEKLSTILSEVMLLASL--NHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90
Query: 74 CIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132
I E +++D + N L D+ + Q++
Sbjct: 91 FIQMEYCENGTLYDLIHSEN------------------------LNQQRDEYWRLFRQIL 126
Query: 133 YAVDY--NNKKKREVRR---------VRRCDIRLIDFGSATF-----------------D 164
A+ Y + + R ++++ DFG A
Sbjct: 127 EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 165 DEHHSTIVSTRHYRAPE------RY---------------MA---SDDEEHRQLF----- 195
++ ++ + T Y A E Y M S E +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 196 ------------------DLISKMLEYEPSERISLSEALRHPFF 221
+I +++++P++R L +
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 51.2 bits (123), Expect = 2e-07
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 255 DIRLIDFGSATF-----------------DDEHHSTIVSTRHYRAPEVILELGWA-QPCD 296
++++ DFG A ++ ++ + T Y A EV+ G + D
Sbjct: 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213
Query: 297 VWSIGCIIFEL 307
++S+G I FE+
Sbjct: 214 MYSLGIIFFEM 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 54.0 bits (130), Expect = 3e-08
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 30/96 (31%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI------------------------VSTRHYRAPEVILE 288
C +++ DFG A T + E + I V TR YRAPE+IL
Sbjct: 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL- 224
Query: 289 LGWA---QPCDVWSIGCIIFELYLGITLMARKTKTK 321
+ D+WS GCI EL + +
Sbjct: 225 -LQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Score = 48.2 bits (115), Expect = 2e-06
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
+L+ ML++ P++RI++ +AL HP+ +
Sbjct: 340 NLLESMLKFNPNKRITIDQALDHPYLKDV 368
Score = 29.3 bits (66), Expect = 2.2
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 25/56 (44%)
Query: 151 CDIRLIDFGSA-TFDDEHHSTI------------------------VSTRHYRAPE 181
C +++ DFG A T + E + I V TR YRAPE
Sbjct: 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 221
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 53.9 bits (130), Expect = 3e-08
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIFEL 307
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Score = 52.8 bits (127), Expect = 7e-08
Identities = 52/283 (18%), Positives = 81/283 (28%), Gaps = 107/283 (37%)
Query: 24 VALKIIK---------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74
VA++II EI L+K+ P +K+ ++FD
Sbjct: 163 VAIRIISKRKFAIGSAREADPALNVETEIEILKKL--NHPC----IIKIKNFFD-AEDYY 215
Query: 75 IAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIY 133
I E++ G +FD + N + YQ++
Sbjct: 216 IVLELMEGGELFDKVVGNKR-------------------------LKEATCKLYFYQMLL 250
Query: 134 AVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATFDDEHH--STIVSTRHYRAP 180
AV Y ++ K E + C I++ DFG + E T+ T Y AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 181 E--------RYMA---------------------SDDEEHRQLF---------------- 195
E Y S+ L
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 196 -------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231
DL+ K+L +P R + EALRHP+ +
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 413
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 54.1 bits (130), Expect = 3e-08
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 23/119 (19%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQP--------CDVWSIGCIIF 305
+L DFG+A DDE ++ T Y P++ + D+WSIG +
Sbjct: 155 YKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 306 ELYLG-------------ITLMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKPLHHSP 351
G +M + K + + + S
Sbjct: 215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR 273
Score = 46.4 bits (110), Expect = 8e-06
Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 47/177 (26%)
Query: 24 VALKII--KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCIAFEI 79
A+K+ + + + E L+K+ N VK+ + H + E
Sbjct: 37 FAIKVFNNISFLRPVDVQMREFEVLKKL--NHKN----IVKLFAIEEETTTRHKVLIMEF 90
Query: 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYN 138
S++ L+E + N + + ++ +++
Sbjct: 91 CPCGSLYTVLEEPS----------------------NAYGLPESEFLIVLRDVVGGMNHL 128
Query: 139 NKKK------------REVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE 181
+ R + + +L DFG+A DDE ++ T Y P+
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 53.5 bits (129), Expect = 3e-08
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQ-----------PCDVWS 299
++LIDFG A + V T +Y PE I ++ ++ DVWS
Sbjct: 165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224
Query: 300 IGCIIFELYLG 310
+GCI++ + G
Sbjct: 225 LGCILYYMTYG 235
Score = 46.9 bits (112), Expect = 5e-06
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQT 234
D++ L+ +P +RIS+ E L HP+ V A+
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
Score = 46.2 bits (110), Expect = 7e-06
Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 50/186 (26%)
Query: 16 VVYEVDS----VVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD 68
V++V + + A+K + + + ++ R EI L K+ + + + +++ D+
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL--QQHSDK--IIRLYDYEI 98
Query: 69 YHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMS 128
++ + E + + +LK+ + + +
Sbjct: 99 TDQYIYMVMECGNIDLNSWLKKKKSID-------------------------PWERKSYW 133
Query: 129 YQLIYAVDYNNKKKREVRR--------VRRCDIRLIDFGSATF-----DDEHHSTIVSTR 175
++ AV + + V + ++LIDFG A + V T
Sbjct: 134 KNMLEAVHTIH-QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 176 HYRAPE 181
+Y PE
Sbjct: 193 NYMPPE 198
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 53.5 bits (129), Expect = 3e-08
Identities = 55/276 (19%), Positives = 92/276 (33%), Gaps = 86/276 (31%)
Query: 23 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 80
+A KII K +E + EI+ + ++ N +++ D F+ + + E +
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQL--DHAN----LIQLYDAFESKNDIVLVMEYVD 169
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD---- 136
G +FD + + +Y + Q+ + +RHM I +D
Sbjct: 170 GGELFDRIIDESY-NLTELDTILFMKQI------------CEGIRHMHQMYILHLDLKPE 216
Query: 137 ---YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY----MA 185
N+ I++IDFG A E T + APE Y
Sbjct: 217 NILCVNRDA--------KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP 268
Query: 186 SD-------------------DEEHRQLF-----------------------DLISKMLE 203
+D + + + ISK+L
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI 328
Query: 204 YEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRI 239
E S RIS SEAL+HP+ R+ AQ + +R
Sbjct: 329 KEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRG 364
Score = 48.5 bits (116), Expect = 1e-06
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I++IDFG A E T + APEV+ + P D+WS+G I +
Sbjct: 227 QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 53.4 bits (129), Expect = 4e-08
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
DLI + + P RI+ ++AL+ +F P
Sbjct: 269 LDLIQGLFLFNPCARITATQALKMKYFSNRP 299
Score = 50.3 bits (121), Expect = 4e-07
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFELYL 309
++L DFG A +F + + V TR YRAPE++ G D+W++GCI+ EL L
Sbjct: 151 LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF--GARMYGVGVDMWAVGCILAELLL 208
Query: 310 GITLMA 315
+ +
Sbjct: 209 RVPFLP 214
Score = 39.1 bits (92), Expect = 0.001
Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 64/194 (32%)
Query: 16 VVY-----EVDSVVALKIIK--NVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKM 63
VY + +VA+K IK + + ++ A R EI LQ++ PN + +
Sbjct: 25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQEL--SHPN----IIGL 77
Query: 64 LDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQ 123
LD F I+ VFDF+ D + ++N L +
Sbjct: 78 LDAF--GHKSNISL------VFDFM--------ETDLEVII--------KDNSLVLTPSH 113
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH- 168
++ + ++Y ++ + ++L DFG A +F +
Sbjct: 114 IKAYMLMTLQGLEYLHQ-----HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168
Query: 169 -STIVSTRHYRAPE 181
+ V TR YRAPE
Sbjct: 169 YTHQVVTRWYRAPE 182
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 53.6 bits (129), Expect = 4e-08
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A +T T +Y APEV+ + + CD+WS+G I++
Sbjct: 203 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254
Score = 43.6 bits (103), Expect = 6e-05
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHP 219
LI +L+ EP++R++++E + HP
Sbjct: 300 MLIRNLLKTEPTQRMTITEFMNHP 323
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 53.0 bits (128), Expect = 4e-08
Identities = 50/258 (19%), Positives = 83/258 (32%), Gaps = 87/258 (33%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
A+K+I K E+ L+K+ PN +K+ + + I E+
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDH--PN----IMKLFEILEDSSSFYIVGELY 103
Query: 81 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD--- 136
G +FD + + +S + Q+ + +M I D
Sbjct: 104 TGGELFDEIIKRKR--FSEHDAARIIKQVFSG------------ITYMHKHNIVHRDLKP 149
Query: 137 ----YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----RY-MA 185
+K+K CDI++IDFG +T + + T +Y APE Y
Sbjct: 150 ENILLESKEKD-------CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 186 SD-------------------DEEHRQLF-----------------------DLISKMLE 203
D + + DLI KML
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 204 YEPSERISLSEALRHPFF 221
+ PS RI+ ++ L HP+
Sbjct: 263 FHPSLRITATQCLEHPWI 280
Score = 51.5 bits (124), Expect = 1e-07
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
DI++IDFG +T + + T +Y APEV L + + CDVWS G I++ L
Sbjct: 162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYIL 215
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 53.1 bits (128), Expect = 4e-08
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 256 IRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
IR+ DFG A ++ T T ++ APEV+ G+ CD+WS+G +++
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLY 211
Score = 51.9 bits (125), Expect = 1e-07
Identities = 49/273 (17%), Positives = 92/273 (33%), Gaps = 101/273 (36%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-GL 82
A+KII +K + EI L + G + PN + + D +D ++ + E++ G
Sbjct: 50 FAVKII---DKSKRDPTEEIEILLRYG-QHPN----IITLKDVYDDGKYVYVVTELMKGG 101
Query: 83 SVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQ-----------L 131
+ D + + +S + + + + V ++ Q +
Sbjct: 102 ELLDKILRQKF--FSEREASAVLFTITKT------------VEYLHAQGVVHRDLKPSNI 147
Query: 132 IYAVDYNNKKKREVRRVRRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPE-----RY 183
+Y + N + IR+ DFG A ++ T T ++ APE Y
Sbjct: 148 LYVDESGNPES----------IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 184 -----------------------MASDDEEHRQLF-----------------------DL 197
D+ ++ DL
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
Query: 198 ISKMLEYEPSERISLSEALRHPFF---DKLPSS 227
+SKML +P +R++ + LRHP+ D+LP
Sbjct: 258 VSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 53.0 bits (128), Expect = 4e-08
Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 85/275 (30%)
Query: 23 VVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
A K + + + R EI L+ + P + + + ++ + + E
Sbjct: 56 EYAAKFLKKRRRGQDCRAEILHEIAVLELA-KSCPR----VINLHEVYENTSEIILILEY 110
Query: 80 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD-- 136
G +F S + V + Q+ L+ V ++ I +D
Sbjct: 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQI------------LEGVYYLHQNNIVHLDLK 158
Query: 137 -----YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY---- 183
++ DI+++DFG + I+ T Y APE Y
Sbjct: 159 PQNILLSSIYPL-------GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 184 MASD-------------------DEEHRQLF-----------------------DLISKM 201
A+D E++++ + D I +
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL 271
Query: 202 LEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQA 236
L P +R + L H + + H + +
Sbjct: 272 LVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETS 306
Score = 49.6 bits (119), Expect = 5e-07
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
DI+++DFG + I+ T Y APE++ D+W+IG I +
Sbjct: 171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAY 224
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 52.9 bits (127), Expect = 5e-08
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 26/96 (27%)
Query: 256 IRLIDFGSATF-----DDEHHSTIVSTRHYRAPEVILELGWAQ-----------PCDVWS 299
++LIDFG A + V +Y PE I ++ ++ DVWS
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 300 IGCIIFELYLG----------ITLMARKTKTKYFYH 325
+GCI++ + G I+ + +
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Score = 47.5 bits (113), Expect = 3e-06
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLV 247
D++ L+ +P +RIS+ E L HP+ V A+ + + + LV
Sbjct: 299 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLV 350
Score = 44.8 bits (106), Expect = 2e-05
Identities = 26/190 (13%), Positives = 63/190 (33%), Gaps = 58/190 (30%)
Query: 16 VVYEVDS----VVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFD 68
V++V + + A+K + + + ++ R EI L K+ + + + +++ D+
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL--QQHSDK--IIRLYDYEI 126
Query: 69 YHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMS 128
++ + E + + +LK+ + + +
Sbjct: 127 TDQYIYMVMECGNIDLNSWLKKKKSID-------------------------PWERKSYW 161
Query: 129 YQLIYAVDYNNKKKREVRRVRRCD------------IRLIDFGSATF-----DDEHHSTI 171
++ AV ++ + D ++LIDFG A +
Sbjct: 162 KNMLEAVHTIHQH-----GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 172 VSTRHYRAPE 181
V +Y PE
Sbjct: 217 VGAVNYMPPE 226
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 52.4 bits (126), Expect = 6e-08
Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 114/296 (38%)
Query: 16 VVYEV-----DSVVALKIIK--NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWF- 67
VV+E D A+K I+ N E RE E+ AL K+ + P V+ + +
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL--EHPG----IVRYFNAWL 73
Query: 68 -----------DYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENN 115
++ I ++ ++ D++ +
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER------------------ 115
Query: 116 YLPYSLDQVRHMSYQLIYAVDY--NNK------KKREVRRVRRCDIRLIDFGSATFDD-- 165
H+ Q+ AV++ + K + +++ DFG T D
Sbjct: 116 ----ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
Query: 166 -------------EHHSTIVSTRHYRAPE------------------------------- 181
H+ V T+ Y +PE
Sbjct: 172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQM 231
Query: 182 ------------RYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225
++ +++ + ++ ML P ER + + F+ L
Sbjct: 232 ERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287
Score = 49.3 bits (118), Expect = 6e-07
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 255 DIRLIDFGSATFDD---------------EHHSTIVSTRHYRAPEVILELGWAQPCDVWS 299
+++ DFG T D H+ V T+ Y +PE I ++ D++S
Sbjct: 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215
Query: 300 IGCIIFEL 307
+G I+FEL
Sbjct: 216 LGLILFEL 223
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 52.7 bits (127), Expect = 6e-08
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 254 CDIRLIDFGSATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIF 305
C I++ DFG + E T+ T Y APEV++ +G A + D WS+G I+F
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Score = 51.5 bits (124), Expect = 1e-07
Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 69/203 (33%)
Query: 119 YSLDQVRHMSYQLIYAVDYNNKK-------KRE----VRRVRRCDIRLIDFGSATFDDEH 167
+ YQ++ AV Y ++ K E + C I++ DFG + E
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 168 H--STIVSTRHYRAPE--------RYMA---------------------SDDEEHRQLF- 195
T+ T Y APE Y S+ L
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
Query: 196 ----------------------DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH-- 231
DL+ K+L +P R + EALRHP+ +
Sbjct: 231 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
Query: 232 --AQTQADRILSSVSSLVMRRVR 252
+ ++ + ++ R R
Sbjct: 291 LSEENESTALPQVLAQPSTSRKR 313
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 52.2 bits (126), Expect = 7e-08
Identities = 50/268 (18%), Positives = 94/268 (35%), Gaps = 104/268 (38%)
Query: 23 VVALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78
VA+K+I K + K R+ E+ ++ K P+ +++ ++F+ ++ + E
Sbjct: 38 EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL--KHPS----ILELYNYFEDSNYVYLVLE 91
Query: 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
+ + +LK + S E ++ RH +Q+I + Y
Sbjct: 92 MCHNGEMNRYLKNRV---------KPFS-------E--------NEARHFMHQIITGMLY 127
Query: 138 NNKKKREVRRV-------------RRCDIRLIDFGSAT---FDDEHHSTIVSTRHYRAPE 181
+ + R +I++ DFG AT E H T+ T +Y +PE
Sbjct: 128 LHSHG-----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 182 RYMAS---------------------------DDEEHRQLF------------------- 195
+A+ D + +
Sbjct: 183 --IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAK 240
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
DLI ++L P++R+SLS L HPF +
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSR 268
Score = 49.1 bits (118), Expect = 6e-07
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFGSAT---FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+I++ DFG AT E H T+ T +Y +PE+ DVWS+GC+ + L +G
Sbjct: 150 NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 52.2 bits (126), Expect = 7e-08
Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 85/254 (33%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE-ILGL 82
K +K + + EI+ L N + + + F+ + + FE I GL
Sbjct: 33 YMAKFVKVKGTDQVLVKKEISILNIARH--RN----ILHLHESFESMEELVMIFEFISGL 86
Query: 83 SVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD------ 136
+F+ + + + + ++ +Q+ + ++ + I D
Sbjct: 87 DIFERINTSAF-ELNEREIVSYVHQV------------CEALQFLHSHNIGHFDIRPENI 133
Query: 137 -YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY----MASD 187
Y ++ I++I+FG A ++ + + Y APE ++ A+D
Sbjct: 134 IYQTRRSS--------TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 188 -------------------DEEHRQLF-----------------------DLISKMLEYE 205
E ++Q+ D + ++L E
Sbjct: 186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245
Query: 206 PSERISLSEALRHP 219
R++ SEAL+HP
Sbjct: 246 RKSRMTASEALQHP 259
Score = 50.7 bits (122), Expect = 3e-07
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I++I+FG A ++ + + Y APEV + D+WS+G +++
Sbjct: 142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 52.5 bits (126), Expect = 7e-08
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQP--------CDVWSIGCIIF 305
+L DFG+A DDE ++ T Y P++ + D+WSIG +
Sbjct: 155 YKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 306 ELYLG 310
G
Sbjct: 215 HAATG 219
Score = 44.7 bits (106), Expect = 2e-05
Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 47/178 (26%)
Query: 23 VVALKII--KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG--HMCIAFE 78
+ A+K+ + + + E L+K+ N VK+ + H + E
Sbjct: 36 LFAIKVFNNISFLRPVDVQMREFEVLKKL--NHKN----IVKLFAIEEETTTRHKVLIME 89
Query: 79 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
S++ L+E + N + + ++ +++
Sbjct: 90 FCPCGSLYTVLEEPS----------------------NAYGLPESEFLIVLRDVVGGMNH 127
Query: 138 NNKKK------------REVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE 181
+ R + + +L DFG+A DDE ++ T Y P+
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Score = 35.1 bits (81), Expect = 0.027
Identities = 4/39 (10%), Positives = 12/39 (30%)
Query: 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231
L +++ +LE + + + + H
Sbjct: 278 LLTPVLANILEADQEKCWGFDQFFAETSDILHRGNSHHH 316
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 52.1 bits (126), Expect = 8e-08
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKL 224
DL+SKML+ +P++RI+ +AL H +F +
Sbjct: 258 IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Score = 47.5 bits (114), Expect = 3e-06
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 256 IRLIDFGSA-TFDDEHH--STIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
+++ DFG A F + + T YRAP+V++ ++ D+WS+GCI E+ G
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 36.0 bits (84), Expect = 0.015
Identities = 41/191 (21%), Positives = 64/191 (33%), Gaps = 62/191 (32%)
Query: 16 VVY----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLDW 66
VVY ALK I+ +EK E R EI+ L+++ K N VK+ D
Sbjct: 17 VVYKAQNNYGETFALKKIR-LEKEDEGIPSTTIR-EISILKEL--KHSN----IVKLYDV 68
Query: 67 FDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRH 126
H + VF+ L D + + + +
Sbjct: 69 I--HTKKRLVL------VFEHL--------DQDLKKLL--------DVCEGGLESVTAKS 104
Query: 127 MSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHH--ST 170
QL+ + Y + RRV R ++++ DFG A F +
Sbjct: 105 FLLQLLNGIAYCHD-----RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 171 IVSTRHYRAPE 181
+ T YRAP+
Sbjct: 160 EIVTLWYRAPD 170
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 52.4 bits (126), Expect = 8e-08
Identities = 53/282 (18%), Positives = 92/282 (32%), Gaps = 96/282 (34%)
Query: 16 VVYEVDS-----VVALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKM 63
+V + A K IK RE E++ L+++ PN + +
Sbjct: 27 IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV--LHPN----IITL 80
Query: 64 LDWFDYHGHMCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLD 122
D ++ + + E++ G +FDFL + S ++ Q+ LD
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQI------------LD 126
Query: 123 QVRHMSYQLIYAVD-------YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVS 173
V ++ + I D +K I+LIDFG A D I
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPI------PHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 174 TRHYRAPE--RY----MASD-------------------DEEHRQLF------------- 195
T + APE Y + +D + ++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 240
Query: 196 ----------DLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
D I K+L E +R+++ EALRHP+ + +
Sbjct: 241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQ 282
Score = 50.8 bits (122), Expect = 3e-07
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I+LIDFG A D I T + APE++ D+WSIG I +
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 52.2 bits (125), Expect = 9e-08
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 252 RRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
R +I+L DFG S D ++ V TR Y +PE + ++ D+WS+G + E+ +G
Sbjct: 167 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Score = 32.9 bits (75), Expect = 0.13
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 122 DQVRHMSYQLIYAVDYNNKKKREVRR---------VRRCDIRLIDFG-SATFDDEHHSTI 171
+ +S +I + Y +K + + R R +I+L DFG S D ++
Sbjct: 131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 172 VSTRHYRAPER 182
V TR Y +PER
Sbjct: 191 VGTRSYMSPER 201
Score = 28.3 bits (63), Expect = 3.5
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
D ++K L P+ER L + + H F +
Sbjct: 303 DFVNKCLIKNPAERADLKQLMVHAFIKR 330
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 51.9 bits (125), Expect = 1e-07
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I+LIDFG A D I T + APE++ D+WSIG I +
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Score = 51.1 bits (123), Expect = 2e-07
Identities = 51/269 (18%), Positives = 87/269 (32%), Gaps = 91/269 (33%)
Query: 24 VALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76
A K IK RE E++ L+++ N + + D ++ + +
Sbjct: 40 YAAKFIKKRQSRASRRGVSREEIEREVSILRQV--LHHN----VITLHDVYENRTDVVLI 93
Query: 77 FE-ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAV 135
E + G +FDFL + S ++ Q+ LD V ++ + I
Sbjct: 94 LELVSGGELFDFLAQKES--LSEEEATSFIKQI------------LDGVNYLHTKKIAHF 139
Query: 136 D-------YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY- 183
D +K I+LIDFG A D I T + APE Y
Sbjct: 140 DLKPENIMLLDKNIPI------PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 184 ---MASD-------------------DEEHRQLF-----------------------DLI 198
+ +D + ++ D I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 199 SKMLEYEPSERISLSEALRHPFFDKLPSS 227
K+L E +R+++ EALRHP+ + +
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVDNQ 282
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 51.4 bits (124), Expect = 1e-07
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I+LIDFG A I T + APE++ D+WSIG I +
Sbjct: 150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 202
Score = 48.7 bits (117), Expect = 9e-07
Identities = 50/261 (19%), Positives = 84/261 (32%), Gaps = 91/261 (34%)
Query: 24 VALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76
A K IK RE E+N L++I + PN + + D F+ + +
Sbjct: 33 YAAKFIKKRRLSSSRRGVSREEIEREVNILREI--RHPN----IITLHDIFENKTDVVLI 86
Query: 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAV 135
E++ G +FDFL E + D+ Q+ LD V ++ + I
Sbjct: 87 LELVSGGELFDFLAEKES--LTEDEATQFLKQI------------LDGVHYLHSKRIAHF 132
Query: 136 D-------YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----- 181
D +K I+LIDFG A I T + APE
Sbjct: 133 DLKPENIMLLDKNVPN------PRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 182 RY-MASD-------------------DEEHRQLF-----------------------DLI 198
+ +D E ++ D I
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 246
Query: 199 SKMLEYEPSERISLSEALRHP 219
++L +P R++++++L H
Sbjct: 247 RRLLVKDPKRRMTIAQSLEHS 267
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 51.5 bits (124), Expect = 1e-07
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSATF---DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L D G F ++V T +Y +PE I E G+ D+WS+GC+++E+
Sbjct: 174 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
Score = 38.8 bits (91), Expect = 0.002
Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 91/263 (34%)
Query: 22 SVVALKIIK----NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAF 77
VALK ++ K R EI+ L+++ PN +K F + I
Sbjct: 58 VPVALKKVQIFDLMDAKARADCIKEIDLLKQL--NHPN----VIKYYASFIEDNELNIVL 111
Query: 78 EIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD 136
E+ + +K + K+ +P V QL A++
Sbjct: 112 ELADAGDLSRMIKH-------------------FKKQKRLIP--ERTVWKYFVQLCSALE 150
Query: 137 YNNKKK---REVRRV-----RRCDIRLIDFGSATF---DDEHHSTIVSTRHYRAPER--- 182
+ + ++ R+++ ++L D G F ++V T +Y +PER
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 183 --Y---------------MA-------SDDEEHRQLF---------------------DL 197
Y MA D L L
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 198 ISKMLEYEPSERISLSEALRHPF 220
++ + +P +R ++
Sbjct: 271 VNMCINPDPEKRPDVTYVYDVAK 293
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 50.9 bits (122), Expect = 2e-07
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 8/65 (12%)
Query: 254 CDIRLIDFGSA--------TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
L DFG A I T + APEV++ D+WS C++
Sbjct: 188 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247
Query: 306 ELYLG 310
+ G
Sbjct: 248 HMLNG 252
Score = 31.6 bits (72), Expect = 0.36
Identities = 8/36 (22%), Positives = 9/36 (25%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVH 231
I + L EP R S E R
Sbjct: 288 QAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKS 323
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 50.7 bits (122), Expect = 2e-07
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 195 FDLISKMLEYEPSERISLSEALRHPFFDKLP 225
DLI K+L +P++RI +AL H FF P
Sbjct: 289 LDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319
Score = 46.5 bits (111), Expect = 7e-06
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 256 IRLIDFGSA-TFDDEHHSTI------VSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFEL 307
++L DFG A F +S V T YR PE++L E + P D+W GCI+ E+
Sbjct: 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Query: 308 YLGITLM 314
+ +M
Sbjct: 223 WTRSPIM 229
Score = 31.4 bits (72), Expect = 0.40
Identities = 40/198 (20%), Positives = 66/198 (33%), Gaps = 63/198 (31%)
Query: 16 VVY-----EVDSVVALKIIKNVEKYRE-----AARLEINALQKIGEKDPNGRHLCVKMLD 65
V+ + VALK + +E +E A R EI LQ + K N V +++
Sbjct: 32 EVFKARHRKTGQKVALKKVL-MENEKEGFPITALR-EIKILQLL--KHEN----VVNLIE 83
Query: 66 WFDYHGHMCIAFEILGLS--VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQ 123
G VFDF D + N + ++L +
Sbjct: 84 IC--RTKASPYNRCKGSIYLVFDFC--------EHDLAGLL--------SNVLVKFTLSE 125
Query: 124 VRHMSYQLIYAVDYNNKKKREVRRV-------------RRCDIRLIDFGSA-TFDDEHHS 169
++ + L+ + Y ++ ++ R ++L DFG A F +S
Sbjct: 126 IKRVMQMLLNGLYYIHR-----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 170 TI------VSTRHYRAPE 181
V T YR PE
Sbjct: 181 QPNRYTNRVVTLWYRPPE 198
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 50.7 bits (122), Expect = 2e-07
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
I++IDFG A I T + APE++ D+WSIG I +
Sbjct: 156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Score = 48.8 bits (117), Expect = 1e-06
Identities = 43/277 (15%), Positives = 90/277 (32%), Gaps = 91/277 (32%)
Query: 24 VALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 76
A K IK RE E++ L++I + PN + + + ++ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEI--QHPN----VITLHEVYENKTDVILI 92
Query: 77 FEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAV 135
E++ G +FDFL E + ++ Q+ L+ V ++ I
Sbjct: 93 LELVAGGELFDFLAEKES--LTEEEATEFLKQI------------LNGVYYLHSLQIAHF 138
Query: 136 D-------YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE----- 181
D ++ + I++IDFG A I T + APE
Sbjct: 139 DLKPENIMLLDRNVPK------PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 182 RY-MASD-------------------DEEHRQLF-----------------------DLI 198
+ +D + ++ D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 199 SKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQ 235
++L +P +R+++ ++L+HP+ + + +
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKAS 289
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 51.4 bits (123), Expect = 3e-07
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 255 DIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++LIDFG + T + APEV D+WS+G + + L
Sbjct: 295 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Score = 49.8 bits (119), Expect = 8e-07
Identities = 46/289 (15%), Positives = 86/289 (29%), Gaps = 93/289 (32%)
Query: 24 VALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 81
A K + E +E R EI + + + P V + D F+ M + +E + G
Sbjct: 185 FAAKFVMTPHESDKETVRKEIQTMSVL--RHPT----LVNLHDAFEDDNEMVMIYEFMSG 238
Query: 82 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVD----- 136
+F+ + + + S D+ Q+ + HM +D
Sbjct: 239 GELFEKVADEHNK-MSEDEAVEYMRQV------------CKGLCHMHENNYVHLDLKPEN 285
Query: 137 --YNNKKKREVRRVRRCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE--RY----MAS 186
+ K+ +++LIDFG + T + APE +
Sbjct: 286 IMFTTKRS--------NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 187 D-------------------DEEHRQLF-----------------------DLISKMLEY 204
D E + D I K+L
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 397
Query: 205 EPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRR 253
+P+ R+++ +AL HP+ + D + S +R +
Sbjct: 398 DPNTRMTIHQALEHPW-------LTPGNAPGRDSQIPSSRYTKIRDSIK 439
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 51.0 bits (122), Expect = 3e-07
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 193 QLFDLISKMLEYEPSERISLSEALRHPFFDKLP 225
+ F L+ K+L +P +RI+ +A++ P+F + P
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341
Score = 48.3 bits (115), Expect = 2e-06
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 256 IRLIDFGSA-TFDDE-----HHSTIVSTRHYRAPEVILELGWAQ---PCDVWSIGCIIFE 306
+++ D G A F+ +V T YRAPE++L G D+W+IGCI E
Sbjct: 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL--GARHYTKAIDIWAIGCIFAE 228
Query: 307 LYLGITLM 314
L +
Sbjct: 229 LLTSEPIF 236
Score = 36.3 bits (84), Expect = 0.014
Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 39/179 (21%)
Query: 21 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
D ALK I+ A R EI L+++ K PN + + F H +
Sbjct: 48 DKDYALKQIEGTGISMSACR-EIALLREL--KHPN----VISLQKVFLSHADRKVWL--- 97
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140
+FD+ D + + + V+ + YQ++ + Y +
Sbjct: 98 ---LFDYA--------EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 141 KK---R---------EVRRVRRCDIRLIDFGSA-TFDDE-----HHSTIVSTRHYRAPE 181
R R +++ D G A F+ +V T YRAPE
Sbjct: 147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 50.7 bits (122), Expect = 3e-07
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 256 IRLIDFGSA-----TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG+A ++ V T Y +PE++ E + D+W++GCII++L G
Sbjct: 169 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 311 IT 312
+
Sbjct: 229 LP 230
Score = 28.7 bits (65), Expect = 2.8
Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 55/127 (43%)
Query: 153 IRLIDFGSA-----TFDDEHHSTIVSTRHYRAPE-----RY-MASD-------------- 187
I++ DFG+A ++ V T Y +PE +SD
Sbjct: 169 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 188 -----DEEHRQLF-------------------DLISKMLEYEPSERI------SLSEALR 217
+F DL+ K+L + ++R+
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 288
Query: 218 HPFFDKL 224
HPFF+ +
Sbjct: 289 HPFFESV 295
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 50.0 bits (120), Expect = 4e-07
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWA------QPCDVWSIGCIIF 305
+I+L DFG + E + T Y APE+I + D+WS G I++
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 306 EL 307
L
Sbjct: 221 TL 222
Score = 48.8 bits (117), Expect = 1e-06
Identities = 26/127 (20%), Positives = 37/127 (29%), Gaps = 56/127 (44%)
Query: 151 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE-----------RY-MASD--------- 187
+I+L DFG + E + T Y APE Y D
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 188 ----------DEEHRQLF-----------------------DLISKMLEYEPSERISLSE 214
+ + DL+S+ L +P +R + E
Sbjct: 221 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 215 ALRHPFF 221
AL HPFF
Sbjct: 281 ALAHPFF 287
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 49.9 bits (119), Expect = 5e-07
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 255 DIRLIDFGSAT---------------FDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWS 299
+++ DFG T H+ V T+ Y +PE I ++ D++S
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 300 IGCIIFELY 308
+G I+FEL
Sbjct: 262 LGLILFELL 270
Score = 41.4 bits (97), Expect = 2e-04
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKL 224
+++ Q ++ ML P+ER ++ + + F+ L
Sbjct: 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 49.7 bits (119), Expect = 5e-07
Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 56/129 (43%)
Query: 151 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE-----------RY-MASD--------- 187
IRL DFG + E + T Y APE Y D
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
Query: 188 ----------DEEHRQLF-----------------------DLISKMLEYEPSERISLSE 214
+ DLIS++L+ +P R++ +
Sbjct: 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQ 356
Query: 215 ALRHPFFDK 223
AL+HPFF++
Sbjct: 357 ALQHPFFER 365
Score = 49.7 bits (119), Expect = 6e-07
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 254 CDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVI------LELGWAQPCDVWSIGCIIF 305
IRL DFG + E + T Y APE++ G+ + D+W+ G I+F
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 49.7 bits (119), Expect = 5e-07
Identities = 58/314 (18%), Positives = 95/314 (30%), Gaps = 97/314 (30%)
Query: 24 VALKIIK---------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMC 74
V +K IK + LEI L ++ + N +K+LD F+ G
Sbjct: 52 VVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV--EHAN----IIKVLDIFENQGFFQ 105
Query: 75 IAFEIL--GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLI 132
+ E GL +F F+ + L E ++ QL+
Sbjct: 106 LVMEKHGSGLDLFAFIDRHPRL-----------------DE--------PLASYIFRQLV 140
Query: 133 YAVDYNNKKKREVRRVR--------RCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPE- 181
AV Y K R ++ I+LIDFGSA + + T T Y APE
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 182 ----RYMAS---------------------DDEEHR-------------QLFDLISKMLE 203
Y + E +L L+S +L+
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQ 260
Query: 204 YEPSERISLSEALRHPFFDKLPSSVRVHAQTQAD------RILSSVSSLVMRRVRRCDIR 257
P R +L + + P+ + + + +LS+ S + R +
Sbjct: 261 PVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGNRSLSDVAQ 320
Query: 258 LIDFGSATFDDEHH 271
+ HH
Sbjct: 321 AQELCGGEGHHHHH 334
Score = 46.6 bits (111), Expect = 5e-06
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 253 RCDIRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYL 309
I+LIDFGSA + + T T Y APEV++ + P ++WS+G ++ L
Sbjct: 166 DFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225
Query: 310 G 310
Sbjct: 226 E 226
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 49.1 bits (118), Expect = 6e-07
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S + + T Y PE+I + D+WS+G + +E +G
Sbjct: 147 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Score = 47.2 bits (113), Expect = 2e-06
Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 93/261 (35%)
Query: 23 VVALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 78
++ALK++ +EK +L E+ + + PN +++ +F + + E
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHL--RHPN----ILRLYGYFHDATRVYLILE 89
Query: 79 -ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY 137
+V+ L++ + E + +L A+ Y
Sbjct: 90 YAPLGTVYRELQKLSKFD-----------------E--------QRTATYITELANALSY 124
Query: 138 NNKKKREVRRV--------RRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPERYMAS-- 186
+ K+ R + ++++ DFG S + + T Y PE M
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE--MIEGR 182
Query: 187 -------------------------DDEEHRQLF-------------------DLISKML 202
+ +++ + DLIS++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
Query: 203 EYEPSERISLSEALRHPFFDK 223
++ PS+R L E L HP+
Sbjct: 243 KHNPSQRPMLREVLEHPWITA 263
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 49.8 bits (119), Expect = 6e-07
Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 253 RCDIRLIDFG-SATFDDEHHS------TIVSTRHYRAPEVILELGWAQ-------PCDVW 298
I + DFG D S T +RAPE++ E Q D++
Sbjct: 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223
Query: 299 SIGCIIFEL 307
S+GC+ + +
Sbjct: 224 SMGCVFYYI 232
Score = 47.1 bits (112), Expect = 5e-06
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLIS+M++++P +R + + LRHP F
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLF 299
Score = 43.2 bits (102), Expect = 8e-05
Identities = 29/186 (15%), Positives = 51/186 (27%), Gaps = 53/186 (28%)
Query: 24 VALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLS 83
VA+K + ++ A EI L + + PN ++ + IA E+ L+
Sbjct: 42 VAVKRM-LIDFCDIALM-EIKLLTESDDH-PN----VIRYYCSETTDRFLYIALELCNLN 94
Query: 84 VFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDY------ 137
+ D ++ N +L + Q+ V +
Sbjct: 95 LQDLVESKNVSDENLKL------------------QKEYNPISLLRQIASGVAHLHSLKI 136
Query: 138 ---------------NNKKKREVRRVRRCDIRLIDFG-SATFDDEHHS------TIVSTR 175
+ + I + DFG D S T
Sbjct: 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTS 196
Query: 176 HYRAPE 181
+RAPE
Sbjct: 197 GWRAPE 202
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 49.4 bits (118), Expect = 8e-07
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 35/89 (39%)
Query: 254 CDIRLIDFGSA-TFDDEHHSTI-----------------------------VSTRHYRAP 283
C +++ DFG A T D + V TR YRAP
Sbjct: 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252
Query: 284 EVILELGWAQ---PCDVWSIGCIIFELYL 309
E+I L DVWSIGCI EL
Sbjct: 253 ELI--LLQENYTEAIDVWSIGCIFAELLN 279
Score = 49.4 bits (118), Expect = 8e-07
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKL 224
L+ +ML + P++RI+++E L HPFF ++
Sbjct: 375 HLLKRMLVFNPNKRITINECLAHPFFKEV 403
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 48.5 bits (116), Expect = 1e-06
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 256 IRLIDFGSATFDDEHHS---TIVSTRHYRAPEVIL--ELGWAQPCDVWSIGCIIFELYLG 310
+++ DFG++ + T T Y APE+I G+ + D+WS+GC I E+ G
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Score = 28.8 bits (65), Expect = 2.7
Identities = 7/38 (18%), Positives = 13/38 (34%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233
I K E +P +R ++ L F + +
Sbjct: 257 AFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPK 294
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 47.3 bits (113), Expect = 3e-06
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
+++ DFG+A H + + + APEV +++ CDV+S G I++E+
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Score = 29.2 bits (66), Expect = 1.7
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 50/177 (28%)
Query: 21 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG----HMCIA 76
VA+K I++ E R+A +E+ L ++ H + L +G +C+
Sbjct: 31 AKDVAIKQIES-ESERKAFIVELRQLSRV-------NHPNIVKL-----YGACLNPVCLV 77
Query: 77 FEIL-GLSVFDFL-KENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRH-MSYQLIY 133
E G S+++ L Y+ Q ++ YL H M + +
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC--SQGVAYL--------HSMQPKALI 127
Query: 134 ---------AVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE 181
+ +++ DFG+A H + + + APE
Sbjct: 128 HRDLKPPNLLLVAGGTV-----------LKICDFGTACDIQTHMTNNKGSAAWMAPE 173
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 47.5 bits (113), Expect = 4e-06
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA--TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
IR+ D G A + + V T Y APEV+ + D W++GC+++E+ G
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 46.9 bits (112), Expect = 4e-06
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 158 FGSATFDDEHHSTI---VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSE 214
FG F DE + + ++ P++ ++D L DLI++ML+ P RI + E
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDIAED-----LKDLITRMLDKNPESRIVVPE 289
Query: 215 ALRHPFFDK 223
HP+ +
Sbjct: 290 IKLHPWVTR 298
Score = 43.0 bits (102), Expect = 6e-05
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 255 DIRLIDFG-SATFDDEHH--STIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIFEL 307
I++ DFG S F S V T + APE + E + DVW++G ++
Sbjct: 175 HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 47.3 bits (113), Expect = 4e-06
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A T+ T APE+IL G+ + D W++G +I+E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 27.3 bits (61), Expect = 8.8
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 49/118 (41%)
Query: 153 IRLIDFGSATFDDEHHSTIVSTRHYRAPE-----RY-MASD------------------- 187
I++ DFG A T+ T APE Y A D
Sbjct: 180 IQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 188 DEEHRQLF-------------------DLISKMLEYEPSERI-----SLSEALRHPFF 221
++ Q++ DL+ +L+ + ++R +++ H +F
Sbjct: 240 ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 46.6 bits (111), Expect = 4e-06
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 255 DIRLIDFGSATF-DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ D G AT ++ T + APE+ E + + DV++ G + E+
Sbjct: 170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEM 222
Score = 37.3 bits (87), Expect = 0.005
Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 47/119 (39%)
Query: 152 DIRLIDFGSATF-DDEHHSTIVSTRHYRAPERY-------------------MA------ 185
+++ D G AT ++ T + APE Y MA
Sbjct: 170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPY 229
Query: 186 SDDEEHRQLF---------------------DLISKMLEYEPSERISLSEALRHPFFDK 223
S+ + Q++ ++I + ER S+ + L H FF +
Sbjct: 230 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 46.6 bits (111), Expect = 5e-06
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 15/67 (22%)
Query: 256 IRLIDFGSATFDD------------EHHSTIVSTRHYRAPEVILELGWA---QPCDVWSI 300
L+D GS + + T YRAPE+ + DVWS+
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 301 GCIIFEL 307
GC+++ +
Sbjct: 233 GCVLYAM 239
Score = 38.5 bits (90), Expect = 0.002
Identities = 37/298 (12%), Positives = 79/298 (26%), Gaps = 108/298 (36%)
Query: 17 VYEV-----DSVVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWF--- 67
V V ALK I + ++ RE A+ E + + PN ++++ +
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH--PN----ILRLVAYCLRE 98
Query: 68 -DYHGHMCIAFE-ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVR 125
+ ++++ ++ + N+L DQ+
Sbjct: 99 RGAKHEAWLLLPFFKRGTLWNEIER-------------------LKDKGNFLT--EDQIL 137
Query: 126 HMSYQLIYAVDYNNKK-------KRE-VRRVRRCDIRLIDFGSATFDD------------ 165
+ + ++ + K K + L+D GS
Sbjct: 138 WLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 166 EHHSTIVSTRHYRAPE-----RYMASDD---------------------EEHRQLFDL-- 197
+ + T YRAPE + D+ + Q D
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257
Query: 198 ----------------------ISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233
++ M+ +P +R + L + P+ + Q
Sbjct: 258 LAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQ 315
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 46.4 bits (111), Expect = 6e-06
Identities = 54/259 (20%), Positives = 89/259 (34%), Gaps = 90/259 (34%)
Query: 24 VALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
VALKII K + K R+ EI+ L+ + + P+ +K+ D + + E
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLL--RHPH----IIKLYDVIKSKDEIIMVIEY 94
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139
G +FD++ + + + E + R Q+I AV+Y +
Sbjct: 95 AGNELFDYIVQRDKM-----------------SE--------QEARRFFQQIISAVEYCH 129
Query: 140 KKKREVRRVR--------RCDIRLIDFG-SATF-DDEHHSTIVSTRHYRAPE-----RYM 184
+ K R ++ ++++ DFG S D T + +Y APE Y
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 185 AS---------------------DDEEHRQLF-------------------DLISKMLEY 204
DDE LF LI +ML
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 205 EPSERISLSEALRHPFFDK 223
P RIS+ E ++ +F
Sbjct: 250 NPLNRISIHEIMQDDWFKV 268
Score = 43.4 bits (103), Expect = 4e-05
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFG-SATF-DDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
++++ DFG S D T + +Y APEVI +A P DVWS G I++ +
Sbjct: 150 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 46.0 bits (110), Expect = 6e-06
Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 55/157 (35%)
Query: 122 DQVRHMSYQLIYAVDYNNKKKREVRRV--------RRCDIRLIDFG-SATF-DDEHHSTI 171
+ R + Q++ AVDY ++ R + + ++ DFG S D E T
Sbjct: 111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 172 VSTRHYRAPE-----RYMAS---------------------DDEEHRQLF---------- 195
+ +Y APE Y DDE LF
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 230
Query: 196 ---------DLISKMLEYEPSERISLSEALRHPFFDK 223
L+ ML+ +P +R ++ + H +F +
Sbjct: 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
Score = 43.3 bits (103), Expect = 5e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFG-SATF-DDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+ ++ DFG S D E T + +Y APEVI +A P D+WS G I++ L G
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 46.6 bits (111), Expect = 6e-06
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 256 IRLIDFGSA----TFDDEHHSTIVSTRHYRAPEVILELGWAQ-------PCDVWSIGCII 304
IRL DFGS V T Y +PE++ +G CD W++G
Sbjct: 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260
Query: 305 FELYLGIT 312
+E++ G T
Sbjct: 261 YEMFYGQT 268
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 46.7 bits (111), Expect = 6e-06
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 256 IRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+R+ D G A T + APE++L + D +++G ++E+
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 46.3 bits (110), Expect = 8e-06
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 252 RRCDIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGW--AQPCDVWSIGCIIFEL 307
+ ++L DFG S D+ T + PE D+WS+G ++ +
Sbjct: 187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
Score = 45.9 bits (109), Expect = 9e-06
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
D + L P+ERI+ +AL+H +
Sbjct: 301 DFLKLFLRKNPAERITSEDALKHEWLAD 328
Score = 39.7 bits (93), Expect = 0.001
Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 48/192 (25%)
Query: 17 VYEVDSVVALKIIK--NVEKYREAARLEINALQKIGEKD--------------PNGRHLC 60
+ + ALK + +EK R+ + + + + D C
Sbjct: 50 CEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY----C 105
Query: 61 VKMLDWFDYHGHMCIAFE-ILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPY 119
+ + + I +E + S+ F + L +N
Sbjct: 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL-----------------DKNYTCFI 148
Query: 120 SLDQVRHMSYQLIYAVDYNNKKKREVRR---------VRRCDIRLIDFG-SATFDDEHHS 169
+ ++ + ++ + Y + +K R + ++L DFG S D+
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 170 TIVSTRHYRAPE 181
T + PE
Sbjct: 209 GSRGTYEFMPPE 220
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 46.3 bits (110), Expect = 8e-06
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 20/71 (28%)
Query: 256 IRLIDFGSATFDD---------------EHHSTIVSTRHYRAPEVILELGWAQP----CD 296
I+L DFGSAT E T +T YR PE+I +L P D
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQD 235
Query: 297 VWSIGCIIFEL 307
+W++GCI++ L
Sbjct: 236 IWALGCILYLL 246
Score = 39.0 bits (91), Expect = 0.002
Identities = 52/288 (18%), Positives = 86/288 (29%), Gaps = 111/288 (38%)
Query: 17 VYEVDSV-----VALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY- 69
VYE V ALK + N E+ A E+ ++K+ ++ V+
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL----SGHPNI-VQFCSAASIG 98
Query: 70 -------HGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLD 122
+ E+ + +FLK+ + L D
Sbjct: 99 KEESDTGQAEFLLLTELCKGQLVEFLKK--------------------MESRGPLS--CD 136
Query: 123 QVRHMSYQLIYAVDYNNKKKREV--RRV--------RRCDIRLIDFGSATFDD------- 165
V + YQ AV + +++K + R + + I+L DFGSAT
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196
Query: 166 --------EHHSTIVSTRHYRAPE------------------------------------ 181
E T +T YR PE
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
Query: 182 --------RY-MASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPF 220
+Y + D ++ LI ML+ P ER+S++E +
Sbjct: 257 AKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 46.1 bits (110), Expect = 8e-06
Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 91/276 (32%)
Query: 24 VALKII--KNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
VALK I + ++K R+ EI+ L+ + + P+ +K+ D + + E
Sbjct: 37 VALKFISRQLLKKSDMHMRVEREISYLKLL--RHPH----IIKLYDVITTPTDIVMVIEY 90
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139
G +FD++ E + E D+ R Q+I A++Y +
Sbjct: 91 AGGELFDYIVEKKRM-----------------TE--------DEGRRFFQQIICAIEYCH 125
Query: 140 KKKREVRRVR--------RCDIRLIDFG-SATFDDEHH-STIVSTRHYRAPE-----RYM 184
+ K R ++ ++++ DFG S D + T + +Y APE Y
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 185 AS---------------------DDEEHRQLF-------------------DLISKMLEY 204
DDE LF LI +M+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVA 245
Query: 205 EPSERISLSEALRHPFFDK-LPSSVRVHAQTQADRI 239
+P +RI++ E R P+F+ LP +R + Q
Sbjct: 246 DPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYA 281
Score = 42.3 bits (100), Expect = 1e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFG-SATFDDEHH-STIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
++++ DFG S D + T + +Y APEVI +A P DVWS G +++ + +G
Sbjct: 146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 46.2 bits (110), Expect = 8e-06
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 256 IRLIDFGSA----TFDDEHHSTIVSTRHYRAPEVILELGWAQP----CDVWSIGCIIFEL 307
++L DFG+ T V T Y +PEV+ G CD WS+G ++E+
Sbjct: 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 308 YLGIT 312
+G T
Sbjct: 267 LVGDT 271
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 45.7 bits (109), Expect = 1e-05
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++++ DFG S T+ T Y PE+I + D+W G + +E +G
Sbjct: 152 ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Score = 45.3 bits (108), Expect = 1e-05
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 159 GSATFDDEHHSTI---VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEA 215
G FD H+ + + P +++ + DLISK+L Y P +R+ L
Sbjct: 208 GMPPFDSPSHTETHRRIVNVDLKFP-PFLSDGSK------DLISKLLRYHPPQRLPLKGV 260
Query: 216 LRHPFFDK 223
+ HP+
Sbjct: 261 MEHPWVKA 268
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 45.5 bits (108), Expect = 2e-05
Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 55/157 (35%)
Query: 122 DQVRHMSYQLIYAVDYNNKKKREVRRVR--------RCDIRLIDFG-SATF-DDEHHSTI 171
+ R + Q++ VDY ++ R ++ + ++ DFG S D E T
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 175
Query: 172 VSTRHYRAPE-----RYMAS---------------------DDEEHRQLF---------- 195
+ +Y APE Y DD+ LF
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT 235
Query: 196 ---------DLISKMLEYEPSERISLSEALRHPFFDK 223
L+ ML+ +P +R ++ + H +F +
Sbjct: 236 PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
Score = 43.6 bits (103), Expect = 6e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 255 DIRLIDFG-SATF-DDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
+ ++ DFG S D E T + +Y APEVI +A P D+WS G I++ L G
Sbjct: 154 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 45.1 bits (107), Expect = 2e-05
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 256 IRLIDFGSA----TFDDEHHSTIVSTRHYRAPEVILELGWAQP-----CDVWSIGCIIFE 306
IRL DFGS S V T Y +PE++ + + CD WS+G ++E
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 307 LYLGIT 312
+ G T
Sbjct: 274 MLYGET 279
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 45.0 bits (107), Expect = 2e-05
Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 16/119 (13%)
Query: 163 FDDEHHST-----IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALR 217
+D S + Y P + + S L+ K+L PS RI++ + +
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL------ALLHKILVENPSARITIPDIKK 261
Query: 218 HPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLID-----FGSATFDDEHH 271
+++K + + + S S D ++ GS + HH
Sbjct: 262 DRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASRTPGSGWSKEHHH 320
Score = 41.9 bits (99), Expect = 2e-04
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTR----HYRAPEVILELGWA-QPCDVWSIGCIIFEL 307
++++ DFG + F + +++ Y APE++ + +P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 44.7 bits (106), Expect = 3e-05
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 163 FDDEHHSTI-------VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEA 215
F+D + + Y P+ S + LIS++ +P+ RIS+ E
Sbjct: 218 FEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC-----HLISRIFVADPATRISIPEI 272
Query: 216 LRHPFFDK-LPSSVRVHAQTQAD 237
H +F K LP+ + + T +
Sbjct: 273 KTHSWFLKNLPADLMNESNTGSQ 295
Score = 43.5 bits (103), Expect = 6e-05
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 252 RRCDIRLIDFG-SATF-DDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELY 308
+++ DFG S + + V T Y APEV+L + DVWS G ++ +
Sbjct: 153 PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212
Query: 309 LG 310
+G
Sbjct: 213 VG 214
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 44.2 bits (105), Expect = 3e-05
Identities = 34/264 (12%), Positives = 72/264 (27%), Gaps = 79/264 (29%)
Query: 23 VVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 79
+ A+K K + A E+ A +G + + V+ + HM I E
Sbjct: 38 IYAIKRSKKPLAGSVDEQNALREVYAHAVLG-QHSH----VVRYFSAWAEDDHMLIQNEY 92
Query: 80 L-GLSVFDFLKENNYLPYSLD--QVRHMSYQLIYA--------------KENNYLPYSLD 122
G S+ D + EN + +++ + Q+ K +N +
Sbjct: 93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIF---IS 149
Query: 123 QVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPE- 181
+ + + + + + ++ D G T + A E
Sbjct: 150 RTSIPNAASEEGDEDDWASNKVM-------FKIGDLGHVTRISSPQ-VEEGDSRFLANEV 201
Query: 182 -----RY---------------MA-------SDDEEHR---------------QLFDLIS 199
+ A + D+ H + +L+
Sbjct: 202 LQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLK 261
Query: 200 KMLEYEPSERISLSEALRHPFFDK 223
M+ +P R S ++H
Sbjct: 262 VMIHPDPERRPSAMALVKHSVLLS 285
Score = 44.2 bits (105), Expect = 3e-05
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 257 RLIDFGSATFDDEHHSTIVSTRHYRAPEVILE-LGWAQPCDVWSIGCIIFEL 307
++ D G T + A EV+ E D++++ +
Sbjct: 174 KIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCA 224
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 44.2 bits (105), Expect = 3e-05
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFG-SATFDDEH--HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++L DFG + D +T V T + APEVI + + D+WS+G EL
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
Score = 30.0 bits (68), Expect = 1.2
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRV 230
+ + L EPS R + E L+H F +
Sbjct: 249 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 44.3 bits (105), Expect = 3e-05
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 255 DIRLIDFG-SATFDDEHH--STIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGI 311
+L DFG + D +T++ T + APEVI E+G+ D+WS LGI
Sbjct: 163 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWS---------LGI 213
Query: 312 TLM 314
T +
Sbjct: 214 TAI 216
Score = 29.6 bits (67), Expect = 1.5
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
D + + L P +R + ++ L+HPF
Sbjct: 257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 44.2 bits (105), Expect = 3e-05
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
DLISK+L + +R+S ++ L+HP+
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 43.8 bits (104), Expect = 4e-05
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 15/66 (22%)
Query: 255 DIRLIDFGSATF----------DDEHHSTIVSTRHYRAPEVILELGWAQ-----PCDVWS 299
+++ DF + T + Y APEV+ CD+WS
Sbjct: 152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS 211
Query: 300 IGCIIF 305
+G I++
Sbjct: 212 LGVILY 217
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 43.8 bits (104), Expect = 4e-05
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 163 FDDEHHSTI---VSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHP 219
F+ ++ + + Y P DL+ MLEYEP++R S+ + +H
Sbjct: 213 FEGDNIYKLFENIGKGSYAIPG-DCGPPLS------DLLKGMLEYEPAKRFSIRQIRQHS 265
Query: 220 FFDK 223
+F K
Sbjct: 266 WFRK 269
Score = 35.3 bits (82), Expect = 0.020
Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTR----HYRAPEVILEL-GWAQP-CDVWSIGCIIFEL 307
+++ G + T ++ PE+ L ++ D+WS G ++ +
Sbjct: 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
Query: 308 YLG 310
G
Sbjct: 207 TTG 209
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 43.8 bits (104), Expect = 4e-05
Identities = 44/259 (16%), Positives = 82/259 (31%), Gaps = 90/259 (34%)
Query: 24 VALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE-I 79
VA+KII + + E+ ++ + PN VK+ + + + + E
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKIL--NHPN----IVKLFEVIETEKTLYLIMEYA 96
Query: 80 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNN 139
G VFD+L + + KE + R Q++ AV Y +
Sbjct: 97 SGGEVFDYLVAHGRM-----------------KE--------KEARSKFRQIVSAVQYCH 131
Query: 140 KK-------KRE-VRRVRRCDIRLIDFG-SATFDDEHH-STIVSTRHYRAPE-----RYM 184
+K K E + +I++ DFG S F Y APE +Y
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 185 AS---------------------DDEEHRQLF-------------------DLISKMLEY 204
D + ++L +L+ + L
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL 251
Query: 205 EPSERISLSEALRHPFFDK 223
P +R +L + ++ + +
Sbjct: 252 NPIKRGTLEQIMKDRWINA 270
Score = 41.9 bits (99), Expect = 2e-04
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 253 RCDIRLIDFG-SATFDDEHH-STIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYL 309
+I++ DFG S F Y APE+ + P DVWS+G I++ L
Sbjct: 150 DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 310 G 310
G
Sbjct: 210 G 210
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 44.5 bits (105), Expect = 4e-05
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 256 IRLIDFGSA-TFDDEHHSTIVSTRHYRAPEVIL-ELGWAQPCDVWSIGCIIFELYLG 310
+R+ D G A F + V T Y APEV+ + + D +S+GC++F+L G
Sbjct: 331 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 43.3 bits (103), Expect = 5e-05
Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 11/66 (16%)
Query: 163 FDDEHHST-----IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALR 217
+D S + Y P + + S L+ K+L PS RI++ + +
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL------ALLHKILVENPSARITIPDIKK 261
Query: 218 HPFFDK 223
+++K
Sbjct: 262 DRWYNK 267
Score = 42.2 bits (100), Expect = 1e-04
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTR----HYRAPEVILELGWA-QPCDVWSIGCIIFELY 308
++++ DFG + F + +++ Y APE++ + +P DVWS G ++ +
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 309 LG 310
G
Sbjct: 203 AG 204
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 42.9 bits (102), Expect = 8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG A + + T+ T Y APEV+ + + D WS G +I+E+ G
Sbjct: 145 IKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 42.7 bits (101), Expect = 9e-05
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 196 DLISKMLEYEPSERISLSEALRHP 219
LI +L+ EP++R++++E + HP
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHP 258
Score = 32.6 bits (75), Expect = 0.14
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 19/50 (38%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIF 305
++L DFG A E E + + CD+WS+G I++
Sbjct: 159 LKLTDFGFA------------------KETTGE-KYDKSCDMWSLGVIMY 189
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 42.9 bits (102), Expect = 9e-05
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L DFG + ++ + T Y APEV+ G Q D WS G ++FE+ G
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 42.7 bits (101), Expect = 9e-05
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 252 RRCDIRLIDFG-SATFDDEH-HSTIVSTRHYRAPEVILELGWAQP-----CDVWSIGCII 304
R I+L DFG S D+ Y APE I +P DVWS+G +
Sbjct: 160 ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219
Query: 305 FELYLG 310
EL G
Sbjct: 220 VELATG 225
Score = 28.5 bits (64), Expect = 2.9
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
+ L + +R ++ L H F +
Sbjct: 262 SFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 42.3 bits (100), Expect = 1e-04
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFGSA---TFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L DFG T + ST+V T ++ APEV+ + D+WS+G + E+
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
Score = 31.9 bits (73), Expect = 0.28
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
D +++ LE + +R S E L+H F
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLKI 275
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 42.4 bits (100), Expect = 1e-04
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 255 DIRLIDFG-SATFDDEH--HSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++L DFG A + ++V T ++ APEVI +A D+WS+G ++ E+
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Score = 32.3 bits (74), Expect = 0.20
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
D + +ML +P ER + E L HPF +
Sbjct: 273 DFLERMLVRDPQERATAQELLDHPFLLQ 300
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 42.1 bits (100), Expect = 1e-04
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
++L DFG + D T T Y APE+++ G + D WS+G +++++ G
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 41.9 bits (99), Expect = 2e-04
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 252 RRCDIRLIDFG-SATFDDEH-HSTIVSTRHYRAPEVILELGWAQP----CDVWSIGCIIF 305
+++ DFG S D+ + Y APE I + D+WS+G +
Sbjct: 145 ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204
Query: 306 ELYLG 310
EL +
Sbjct: 205 ELAIL 209
Score = 29.9 bits (68), Expect = 1.1
Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 95/277 (34%)
Query: 16 VVYEV-----DSVVALKIIKNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFD 68
VV ++ ++A+K I+ +E RL +++ I + + V
Sbjct: 22 VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD----ISMRTVDCPFT-VTFYGALF 76
Query: 69 YHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMS 128
G + I E++ S+ F K+ ++ + D + ++
Sbjct: 77 REGDVWICMELMDTSLDKFYKQVIDKGQTIPE---------------------DILGKIA 115
Query: 129 YQLIYAVDYNNKKKREVRR---------VRRCDIRLIDFG-SATFDDEH-HSTIVSTRHY 177
++ A+++ + K + R +++ DFG S D+ + Y
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPY 175
Query: 178 RAPER---------Y---------------MA-------SDDEEHRQLF----------- 195
APER Y +A S +QL
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Query: 196 ---------DLISKMLEYEPSERISLSEALRHPFFDK 223
D S+ L+ ER + E ++HPFF
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 42.0 bits (99), Expect = 2e-04
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 41.5 bits (98), Expect = 2e-04
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 252 RRCDIRLIDFG-SATFDDE-HHSTIVSTRHYRAPEVILELGWAQP----CDVWSIGCIIF 305
R +I+L DFG S D + R Y APE I Q DVWS+G ++
Sbjct: 161 RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY 220
Query: 306 ELYLG 310
EL G
Sbjct: 221 ELATG 225
Score = 26.9 bits (60), Expect = 9.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
+ ++ L + S+R E L+HPF
Sbjct: 264 NFVNLCLTKDESKRPKYKELLKHPFI 289
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 41.6 bits (98), Expect = 2e-04
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 252 RRCDIRLIDFG-SATFDD-EHHSTIVSTRHYRAPEVILELGWAQP----CDVWSIGCIIF 305
+++ DFG S D + + Y APE I + D+WS+G +
Sbjct: 189 ALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 306 ELYLG 310
EL +
Sbjct: 249 ELAIL 253
Score = 28.1 bits (63), Expect = 4.2
Identities = 43/265 (16%), Positives = 83/265 (31%), Gaps = 90/265 (33%)
Query: 23 VVALKIIKNVEKYREAARL--EINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 80
++A+K I+ +E RL +++ I + + V G + I E++
Sbjct: 78 IMAVKRIRATVNSQEQKRLLMDLD----ISMRTVDCPFT-VTFYGALFREGDVWICMELM 132
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140
S+ F K+ ++ + D + ++ ++ A+++ +
Sbjct: 133 DTSLDKFYKQVIDKGQTIPE---------------------DILGKIAVSIVKALEHLHS 171
Query: 141 KKREVRR---------VRRCDIRLIDFG-SATFDD-EHHSTIVSTRHYRAPER------- 182
K + R +++ DFG S D + + Y APER
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 183 --Y---------------MAS-----DDEEH--RQLF--------------------DLI 198
Y +A D +QL D
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 199 SKMLEYEPSERISLSEALRHPFFDK 223
S+ L+ ER + E ++HPFF
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFFTL 316
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 41.1 bits (97), Expect = 3e-04
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWA--QPCDVWSIGCIIFELY 308
++ DFG + S ++ + APE I + + D +S I++ +
Sbjct: 168 AKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 41.4 bits (97), Expect = 3e-04
Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 256 IRLIDFGSA-TFDDEHHSTIVSTRHYRAPEVILELGWAQP-CDVWSIGCIIFELYLG 310
++LID G+ + + T ++APE++ D++++G + L L
Sbjct: 220 LKLIDLGAVSRINSF--GYLYGTPGFQAPEIVR--TGPTVATDIYTVGRTLAALTLD 272
Score = 30.6 bits (69), Expect = 0.89
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
Query: 153 IRLIDFGSA-TFDDEHHSTIVSTRHYRAPERYM-----ASD 187
++LID G+ + + T ++APE A+D
Sbjct: 220 LKLIDLGAVSRINSF--GYLYGTPGFQAPEIVRTGPTVATD 258
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 41.0 bits (97), Expect = 4e-04
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D +T T Y APE++L + D WS G +++E+ +G
Sbjct: 157 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 40.8 bits (96), Expect = 4e-04
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 256 IRLIDFGSATF--DDEHHSTIVSTRHYRAPEVILE---LGWAQPCDVWSIGCIIFELYLG 310
+ + DF A + +T+ T+ Y APE+ G++ D WS+G +EL G
Sbjct: 154 VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
Score = 30.4 bits (69), Expect = 0.89
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 196 DLISKMLEYEPSERI-SLSEALRHPFF 221
L+ K+LE P +R LS+ P+
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPYM 275
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 40.3 bits (95), Expect = 7e-04
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG D T T Y APEV+ + + + D W +G +++E+ G
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 40.1 bits (94), Expect = 7e-04
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 255 DIRLIDFG-SATFDDEH--HSTIVSTRHYRAPEVILELGWAQP-----CDVWSIGCIIFE 306
+++L+DFG SA D +T + T ++ APEVI D+WS+G E
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 307 L 307
+
Sbjct: 227 M 227
Score = 28.9 bits (65), Expect = 2.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQ 233
I L S+R + + ++HPF P+ +V Q
Sbjct: 265 SFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQ 302
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 39.9 bits (94), Expect = 8e-04
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + ST T +Y APE++ + D W++G ++FE+ G
Sbjct: 149 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 39.6 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I L DFG + ST T Y APEV+ + + + D W +G +++E+ G
Sbjct: 178 IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 39.2 bits (92), Expect = 0.001
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 256 IRLIDFG----SATFDDEHHSTIVSTRHYRAPEVILEL--GWAQPCDVWSIGCIIFELYL 309
+ L DFG + E T Y AP+++ G + D WS+G +++EL
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 310 G 310
G
Sbjct: 258 G 258
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 39.3 bits (92), Expect = 0.001
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I+L D+G + ST T +Y APE++ + D W++G ++FE+ G
Sbjct: 192 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 39.6 bits (92), Expect = 0.001
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG +D T T Y APE+I + + D W+ G +++E+ G
Sbjct: 481 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 38.8 bits (91), Expect = 0.002
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
+L DFG + +T T Y APE++ E+ + D W++G +++E+ G
Sbjct: 163 CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 38.5 bits (90), Expect = 0.002
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 255 DIRLIDFG-SATFDDEH--HSTIVSTRHYRAPEVILELGWAQP-----CDVWSIGCIIFE 306
DIRL DFG SA + + T ++ APEV++ D+WS+G + E
Sbjct: 155 DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 214
Query: 307 L 307
+
Sbjct: 215 M 215
Score = 29.6 bits (67), Expect = 1.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDKLPSS 227
D + L+ P R S ++ L HPF + S+
Sbjct: 254 DFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 38.4 bits (90), Expect = 0.002
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 260 DFGSATF-DDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
DFG A + + APEVI +++ DVWS G +++EL
Sbjct: 159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 38.0 bits (89), Expect = 0.003
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 256 IRLIDFG---SATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLG 310
I++ DFG +D T T Y APE+I + + D W+ G +++E+ G
Sbjct: 160 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 38.3 bits (88), Expect = 0.004
Identities = 61/373 (16%), Positives = 112/373 (30%), Gaps = 113/373 (30%)
Query: 30 KNVEKYREAARLEINALQKIGEKDPNG----RHLC-VKMLDWFDYHGHMCIAFEIL---- 80
N++ + + E+ L K + N ++ K + F+ C +IL
Sbjct: 221 SNIKLRIHSIQAELRRLLK-SKPYENCLLVLLNVQNAKAWNAFNLS---C---KILLTTR 273
Query: 81 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNK 140
V DFL SLD + + D+V+ + L+ +D +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHS--------------MTLTPDEVKSL---LLKYLDCRPQ 316
Query: 141 K-KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLIS 199
REV + +I A + +T + +H +L +I
Sbjct: 317 DLPREVLTTNPRRLSII----AESIRDGLATWDNWKHV------------NCDKLTTIIE 360
Query: 200 KMLEY-EPSERISLSEALRHPFFDKL---PSSVRVHAQT-----------QADRILSSV- 243
L EP+E R FD+L P S + +++ +
Sbjct: 361 SSLNVLEPAE-------YRK-MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 244 -SSLVMRRVRRCDIRLIDF-----GSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCD- 296
SLV ++ + I + + H +IV HY P+ P
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--HYNIPKTFDSDDLIPPYLD 470
Query: 297 ---VWSIG-----------CIIFE-LYLGITLMARKTKTKYFYHGKLDWDEKGTA----- 336
IG +F ++L + +K + H W+ G+
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR-----HDSTAWNASGSILNTLQ 525
Query: 337 -----GRYVRENC 344
Y+ +N
Sbjct: 526 QLKFYKPYICDND 538
Score = 36.4 bits (83), Expect = 0.014
Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 30/143 (20%)
Query: 126 HMSYQLIYAVDYNNKKKREVRR---VRRCDIRLI-DFGSATFDDEHHSTIVSTRHYRAPE 181
HM ++ Y K V V D + + D + E I+ ++
Sbjct: 6 HMDFE-TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD----- 59
Query: 182 RYMASDDEEHRQLFDLISKMLEYEPSERIS--LSEALR--HPFF-------DKLPSSVRV 230
+LF L + E + + E LR + F + PS +
Sbjct: 60 -----AVSGTLRLFWT----LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR 110
Query: 231 HAQTQADRILSSVSSLVMRRVRR 253
Q DR+ + V R
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSR 133
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 37.7 bits (88), Expect = 0.004
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 255 DIRLIDFG-----SATFDDEHHS---TIVSTRHYRAPEVILEL-GWAQPCDVWSIGCIIF 305
+++ DFG + D + T V T + APEV+ ++ G+ D+WS G
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 306 EL 307
EL
Sbjct: 219 EL 220
Score = 32.3 bits (74), Expect = 0.21
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
+IS L+ +P +R + +E LRH FF K
Sbjct: 266 KMISLCLQKDPEKRPTAAELLRHKFFQK 293
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 37.4 bits (87), Expect = 0.004
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 13/85 (15%)
Query: 260 DFGSATFDDEHHSTI-------VSTRHYRAPEVILELGWAQP------CDVWSIGCIIFE 306
D G A D TI V T+ Y APEV+ + + D++++G + +E
Sbjct: 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
Query: 307 LYLGITLMARKTKTKYFYHGKLDWD 331
+ ++ + Y+ + D
Sbjct: 250 IARRCSIGGIHEDYQLPYYDLVPSD 274
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 37.4 bits (87), Expect = 0.005
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 255 DIRLIDFG-SATFDDEHHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFEL 307
++L DFG ++ ++ V T ++ APEVIL E + DVWS+G EL
Sbjct: 192 LVKLGDFGSASIMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Score = 28.9 bits (65), Expect = 2.5
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFFDK 223
+ + L+ P +R + L+H F +
Sbjct: 284 NFVDSCLQKIPQDRPTSEVLLKHRFVLR 311
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 37.0 bits (86), Expect = 0.006
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 13/85 (15%)
Query: 260 DFGSATFDDEHHSTI-------VSTRHYRAPEVILELGWAQP------CDVWSIGCIIFE 306
D G A D TI V T+ Y APEV+ + + D++++G + +E
Sbjct: 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
Query: 307 LYLGITLMARKTKTKYFYHGKLDWD 331
+ ++ + Y+ + D
Sbjct: 211 IARRCSIGGIHEDYQLPYYDLVPSD 235
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 36.5 bits (85), Expect = 0.008
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 260 DFGSATFDDEHHSTIVS---TRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
DFG + + S T + APEV+ + + DV+S G I++EL
Sbjct: 182 DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 36.1 bits (84), Expect = 0.013
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSATFDDEHHST----IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
L+DFG A+ + T V T +Y APE E D++++ C+++E
Sbjct: 173 AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228
Score = 27.6 bits (62), Expect = 6.4
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 153 IRLIDFGSATFDDEHHST----IVSTRHYRAPER 182
L+DFG A+ + T V T +Y APER
Sbjct: 173 AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPER 206
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 35.7 bits (83), Expect = 0.013
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTRHYRAPEVIL---ELGWAQPCDVWSIGCIIFELY 308
R+ + + APE + E + D+WS +++EL
Sbjct: 152 ARISMADVKFS--FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 35.0 bits (81), Expect = 0.024
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Query: 260 DFGSATFDDEHHSTIVS-----TRHYRAPEVILELGWA---QPCDVWSIGCIIFELYLG 310
DFG AT + + + APEVI DV+S G +++EL G
Sbjct: 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 34.3 bits (79), Expect = 0.045
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 13/85 (15%)
Query: 260 DFGSATFDDEHHSTI-------VSTRHYRAPEVILELGWAQP------CDVWSIGCIIFE 306
D G A + + V T+ Y PEV+ E D++S G I++E
Sbjct: 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
Query: 307 LYLGITLMARKTKTKYFYHGKLDWD 331
+ + + YH + D
Sbjct: 245 VARRCVSGGIVEEYQLPYHDLVPSD 269
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 34.5 bits (79), Expect = 0.051
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 12/65 (18%)
Query: 255 DIRLIDFG-SATFDDE---------HHSTIVSTRHYRAPEVILE--LGWAQPCDVWSIGC 302
+ L + + V + +PEV+ + G+ D++S+G
Sbjct: 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 225
Query: 303 IIFEL 307
EL
Sbjct: 226 TACEL 230
Score = 31.4 bits (71), Expect = 0.38
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 196 DLISKMLEYEPSERISLSEALRHPFF 221
+ + L+ P R S S L H FF
Sbjct: 312 HFVEQCLQRNPDARPSASTLLNHSFF 337
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 33.8 bits (78), Expect = 0.057
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 8/59 (13%)
Query: 260 DFG-----SATFDDEHHSTIVSTRHYRAPEVILELGWA---QPCDVWSIGCIIFELYLG 310
DFG S + + + APEVI DV++ G +++EL G
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 33.9 bits (78), Expect = 0.063
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 260 DFGSATFDDEHHSTIVS-----TRHYRAPEVI-----LELGWAQPCDVWSIGCIIFEL 307
DFG A + S + TR Y APEV+ + D++++G +++EL
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 33.9 bits (78), Expect = 0.068
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
Query: 260 DFGSATFDDEHHSTI-------VSTRHYRAPEVILELGWAQP------CDVWSIGCIIFE 306
D G A + + + V T+ Y APEV+ E D+W+ G +++E
Sbjct: 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 307 LY 308
+
Sbjct: 216 VA 217
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 33.1 bits (76), Expect = 0.10
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 17/66 (25%)
Query: 260 DFGSATF--------DDEHHSTIVSTRHYRAPEVILELGWAQP---------CDVWSIGC 302
DFG + ++ + APE+I +L DV+++G
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 303 IIFELY 308
I +EL+
Sbjct: 232 IWYELH 237
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 31.0 bits (71), Expect = 0.48
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 256 IRLIDFGSATFDDEHHST----IVSTRHYRAPEVILELGWAQPCDVWSIGCIIFEL 307
+++ DFG A E T ++ T Y +PE + D++SIG +++E+
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 0.88
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 17 VYEVDSVVALKIIKNVE 33
+Y DS AL I +E
Sbjct: 31 LYADDSAPALAIKATME 47
Score = 28.8 bits (63), Expect = 1.7
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 16/42 (38%)
Query: 208 ERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMR 249
E+ +AL+ KL +S++++A D S +L ++
Sbjct: 18 EK----QALK-----KLQASLKLYA---DD----SAPALAIK 43
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 29.8 bits (67), Expect = 1.2
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 18/71 (25%)
Query: 260 DFGSATF-----------DDEHHSTIVSTRHYRAPEVI-------LELGWAQPCDVWSIG 301
DFG + +D + V T Y APEV+ + D++++G
Sbjct: 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
Query: 302 CIIFELYLGIT 312
I +E+++ T
Sbjct: 223 LIYWEIFMRCT 233
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 29.1 bits (66), Expect = 2.2
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 256 IRLIDFGSATFDDEHHSTIVSTR------HYRAPEVILELGWAQPCDVWSIGCIIFEL 307
++++DFG A + +++ T Y +PE DV+S+GC+++E+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, helix-turn-helix;
2.20A {Planctomyces limnophilus}
Length = 168
Score = 28.6 bits (64), Expect = 2.4
Identities = 13/82 (15%), Positives = 21/82 (25%), Gaps = 13/82 (15%)
Query: 145 VRRV------RRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS-DDEEHRQLFDL 197
V R R ++ L D G D + + ER + +E +L L
Sbjct: 92 VLRTRKPENRRVVEVALTDAGLKLLKD------LEEPVRQCHERQLGHLAADELHELIRL 145
Query: 198 ISKMLEYEPSERISLSEALRHP 219
+ P
Sbjct: 146 MELARTPHEEPGSRWIADRSRP 167
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 28.8 bits (65), Expect = 2.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 273 TIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELY 308
T+V ++ APE+I + + DV+S G ++ E+
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>2hmq_A Hemerythrin; oxygen transport; 1.66A {Themiste dyscritum} SCOP:
a.24.4.1 PDB: 2hmz_A 1hmd_A 1hmo_A 1i4y_A 1i4z_A 1hrb_A
Length = 113
Score = 27.5 bits (61), Expect = 2.6
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 188 DEEHRQLFDLISKMLEYEPSERISLSEALRH 218
D+EH+ LF+ I + + L+E R
Sbjct: 22 DDEHKTLFNGILLL--SQADNADHLNELRRC 50
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural
genomics, midwest center for structural genomics; HET:
PGE; 2.49A {Geobacter sulfurreducens}
Length = 114
Score = 27.6 bits (62), Expect = 2.7
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Query: 49 IGEKDPNGRHLCV--KMLDWFDYHGHMCIAFEILGLSVFDFLKE 90
+ D R+L V + + + +ILG+S +D E
Sbjct: 16 LAMFDREMRYLAVSRRWREDYGLGDG-----DILGMSHYDIFPE 54
>2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces
cerevisiae}
Length = 312
Score = 28.6 bits (63), Expect = 2.7
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 171 IVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSE----RISLSEALRHPFFDKLPS 226
I + YR P+ Y+ + L +M E ++ ++ + PF+
Sbjct: 175 IAYSTSYRVPKMYIVGFNSNGSPL--SPEQMFEDISADYRTKTATIEK---LPFYKNSVL 229
Query: 227 SVRVHAQTQADRILSSVSSLVMRRVRR 253
SV +H A+ + + + + R RR
Sbjct: 230 SVSIHPCKHANVMKILLDKVRVVRQRR 256
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 28.6 bits (64), Expect = 3.3
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 260 DFGSATF--DDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
DFG + D + + + + APE + ++ DVW+ G +++E+
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A
{Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1
d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Length = 645
Score = 28.7 bits (65), Expect = 3.4
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 142 KREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDD 188
K E +RV + +I F E +S +S R E+Y DD
Sbjct: 396 KEEFKRV----VNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDD 438
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1,
putative MARR-like transcription regulator, MAR
structural genomics; 2.38A {Bacillus cereus}
Length = 139
Score = 26.9 bits (60), Expect = 5.4
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 9/59 (15%)
Query: 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS-DDEEHRQLFDLISKMLE 203
+R + L G T V ++ + EE L DL+ K +
Sbjct: 86 QRETL--VYLTKKGEETKKQ------VDVQYSDFLKENCGCFTKEEEGILEDLLLKWKK 136
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for
structural genomics, PSI, protein structure initiative,
MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Length = 145
Score = 26.9 bits (60), Expect = 6.1
Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 9/59 (15%)
Query: 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS-DDEEHRQLFDLISKMLE 203
RR + + G + V R E+ + E+ ++ D + ++
Sbjct: 86 RRAYF--LVITRKGEEVIEK------VIERRENFIEKITSDLGKEKSSKILDYLKELKG 136
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 27.5 bits (61), Expect = 7.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 260 DFGSA--TFDDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
DFG A D+E+ + + + APE L + DVWS G ++ EL
Sbjct: 406 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
>3agt_A Hemerythrin-like domain protein DCRH; metal binding protein, oxygen
binding, DIIRON, four-helix BU; 1.40A {Desulfovibrio
vulgaris} PDB: 2awy_A 2avk_A 3agu_A 2awc_A
Length = 136
Score = 26.4 bits (58), Expect = 8.1
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 188 DEEHRQLFDLISKMLE 203
D +H++L D I+ +
Sbjct: 20 DTQHKRLVDYINDLYR 35
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix;
2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Length = 181
Score = 26.7 bits (59), Expect = 8.2
Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 146 RRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMAS-DDEEHRQLFDLISKMLE 203
RR IRL G A + H +R +A +E R L +L +ML
Sbjct: 125 RRSAS--IRLTPQGRALVTH------LLPAHLATTQRVLAPLSAQEQRTLEELAGRMLA 175
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 27.4 bits (61), Expect = 8.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 260 DFGSA--TFDDEHHSTIVSTRHYR--APEVILELGWAQPCDVWSIGCIIFELY 308
DFG A D+E+ + + + APE L + DVWS G ++ EL
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 27.1 bits (61), Expect = 9.1
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Query: 157 DFGSATFDDEHHSTIVSTR-----HYRAPERYM 184
DFG A ++ T++++R Y APE +
Sbjct: 176 DFGLARASEKFAQTVMTSRIVGTTAYMAPE-AL 207
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.137 0.423
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,786,149
Number of extensions: 355640
Number of successful extensions: 1903
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1656
Number of HSP's successfully gapped: 455
Length of query: 351
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 257
Effective length of database: 4,077,219
Effective search space: 1047845283
Effective search space used: 1047845283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.2 bits)