Query psy2017
Match_columns 255
No_of_seqs 222 out of 1577
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 22:06:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dqc_A Tachycitin; disulfide-r 99.5 1.6E-14 5.6E-19 98.5 3.2 58 190-251 9-66 (74)
2 1dqc_A Tachycitin; disulfide-r 99.4 3.8E-13 1.3E-17 91.7 5.5 56 26-87 9-64 (74)
3 1wb0_A Chitinase 1, chitotrios 98.7 2.1E-09 7.2E-14 97.4 0.0 51 188-241 394-445 (445)
4 1wb0_A Chitinase 1, chitotrios 98.6 5.4E-09 1.8E-13 94.8 0.0 50 25-76 395-445 (445)
5 1xu2_R Tumor necrosis factor r 47.1 7.4 0.00025 22.9 1.1 20 58-77 2-21 (47)
6 3ssb_I IMPI alpha, inducible m 39.8 4.8 0.00017 21.8 -0.4 22 221-246 8-29 (32)
7 1hx2_A BSTI; beta-sheet disulf 39.3 29 0.001 21.1 3.2 17 137-153 2-18 (60)
8 1ccv_A AMCI, chymotrypsin inhi 35.1 15 0.0005 22.3 1.2 19 58-77 36-54 (56)
9 2p3f_N Anti-coagulant protein 27.3 24 0.00082 23.1 1.3 20 59-78 50-69 (78)
10 2b5b_A Defensin; antibiotic; N 24.5 16 0.00055 19.3 0.0 12 41-52 21-32 (36)
11 1iyc_A Scarabaecin; antifungal 22.8 26 0.00089 18.5 0.6 13 135-147 14-26 (36)
12 1bx7_A Hirustasin; anti-coagul 21.2 1.3E+02 0.0045 18.1 3.6 34 203-241 8-47 (55)
No 1
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.47 E-value=1.6e-14 Score=98.49 Aligned_cols=58 Identities=24% Similarity=0.576 Sum_probs=52.6
Q ss_pred CcccCCCCCcccCCcCCcccEEccCCeeEeccCCCCCccCcCCCCCCCCCCCCcccCCCccc
Q psy2017 190 AFKCPQKNGQYEDPVQCDKYYECFDGQATEKLCPDGLVFDPLNRKINKCDQPFNVECGDRLE 251 (255)
Q Consensus 190 ~~~C~~~~g~~~~~~~C~~y~~C~~g~~~~~~Cp~G~~Fd~~~~~~~~C~~~~~v~C~~~~~ 251 (255)
.+.|+. +|+|+|+.+|++||+|.+|.++++.||.|++||+. ++.|||+++|.|..+..
T Consensus 9 ~~~C~~-~G~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~---~~~Cd~p~~v~C~~~~~ 66 (74)
T 1dqc_A 9 YSPCLD-DGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAY---LKVCDWPSKAGCTSVNK 66 (74)
T ss_dssp GCCSSS-SEEECCSSCSSEEEEEETTEEEEEECTTSCEEETT---TTEEECTTTTTCCSSCC
T ss_pred CCcCCC-CCEeCCcccCcceeECCCCcEEEeECcCCCEEChh---hCcCcCcccCCCCCCCC
Confidence 357884 89999999999999999999999999999999996 79999999999987653
No 2
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.39 E-value=3.8e-13 Score=91.66 Aligned_cols=56 Identities=34% Similarity=0.717 Sum_probs=50.8
Q ss_pred CCCCCCCCCcccCCCCcCCCccEEcCCCceEEeeCCCCCeeeCCCCcccCCCccCCCCCCCC
Q psy2017 26 SYLCPRRNGYFAHPDEKVCNIFYNCIEGDSTEIICPTGLHFDEYTGTCVWPESAGRIGCGEP 87 (255)
Q Consensus 26 ~~~C~~~~G~~~~p~p~~C~~y~~C~~g~~~~~~Cp~g~~Fd~~~~~C~~~~~~~~~~C~~~ 87 (255)
.+.|+. +|+| +||.+|++||+|.+|.++++.||.||+||+.++.|+|+.+|. |...
T Consensus 9 ~~~C~~-~G~~--~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v~---C~~~ 64 (74)
T 1dqc_A 9 YSPCLD-DGPN--VNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG---CTSV 64 (74)
T ss_dssp GCCSSS-SEEE--CCSSCSSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTTT---CCSS
T ss_pred CCcCCC-CCEe--CCcccCcceeECCCCcEEEeECcCCCEEChhhCcCcCcccCC---CCCC
Confidence 467875 7999 788999999999999999999999999999999999999985 8754
No 3
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.68 E-value=2.1e-09 Score=97.40 Aligned_cols=51 Identities=29% Similarity=0.657 Sum_probs=0.0
Q ss_pred CCCcccCCC-CCcccCCcCCcccEEccCCeeEeccCCCCCccCcCCCCCCCCCCC
Q psy2017 188 NAAFKCPQK-NGQYEDPVQCDKYYECFDGQATEKLCPDGLVFDPLNRKINKCDQP 241 (255)
Q Consensus 188 ~~~~~C~~~-~g~~~~~~~C~~y~~C~~g~~~~~~Cp~G~~Fd~~~~~~~~C~~~ 241 (255)
...+.|+.. +|+|+||.+|++||+|.+|..+++.||.|++||+. ++.|+||
T Consensus 394 ~~~~~C~~~~~G~~~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~---~~~Cd~p 445 (445)
T 1wb0_A 394 GQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNS---CKCCTWN 445 (445)
T ss_dssp -------------------------------------------------------
T ss_pred CCCCcCCCCCCcccCCCCCCCcccCCCCCCEEeCCCcCCCEECcc---cCCCCCC
Confidence 345789974 89999999999999999999999999999999996 7999996
No 4
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.59 E-value=5.4e-09 Score=94.75 Aligned_cols=50 Identities=30% Similarity=0.773 Sum_probs=0.0
Q ss_pred CCCCCCC-CCCcccCCCCcCCCccEEcCCCceEEeeCCCCCeeeCCCCcccCC
Q psy2017 25 GSYLCPR-RNGYFAHPDEKVCNIFYNCIEGDSTEIICPTGLHFDEYTGTCVWP 76 (255)
Q Consensus 25 ~~~~C~~-~~G~~~~p~p~~C~~y~~C~~g~~~~~~Cp~g~~Fd~~~~~C~~~ 76 (255)
..+.|+. .+|+| |||.+|++||+|.+|.++.+.||.|++||+..+.|+|+
T Consensus 395 ~~~~C~~~~~G~~--~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 395 QDTFCQGKADGLY--PNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp -----------------------------------------------------
T ss_pred CCCcCCCCCCccc--CCCCCCCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 3578986 48999 88899999999999999999999999999999999986
No 5
>1xu2_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 2.35A {Homo sapiens} SCOP: g.24.1.2 PDB: 2kn1_A* 1oqd_K
Probab=47.12 E-value=7.4 Score=22.94 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=16.0
Q ss_pred eeCCCCCeeeCCCCcccCCC
Q psy2017 58 IICPTGLHFDEYTGTCVWPE 77 (255)
Q Consensus 58 ~~Cp~g~~Fd~~~~~C~~~~ 77 (255)
..||...+||..++.|+.=.
T Consensus 2 ~~C~~eqYwD~LL~~C~pC~ 21 (47)
T 1xu2_R 2 GQCSQNEYFDSLLHACIPCQ 21 (47)
T ss_dssp --CCTTEEEETTTTEEEEGG
T ss_pred CCCcHHHHHHHHHhcccchh
Confidence 57999999999999999633
No 6
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=39.75 E-value=4.8 Score=21.76 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=16.3
Q ss_pred cCCCCCccCcCCCCCCCCCCCCcccC
Q psy2017 221 LCPDGLVFDPLNRKINKCDQPFNVEC 246 (255)
Q Consensus 221 ~Cp~G~~Fd~~~~~~~~C~~~~~v~C 246 (255)
.|+.|++.|.. +.|+.+.+=.|
T Consensus 8 ~C~~G~vrn~~----G~CV~~~~Cp~ 29 (32)
T 3ssb_I 8 YCEDGYARDVN----GKCIPIKDCPK 29 (32)
T ss_dssp EECTTEEECTT----SCEEEGGGCCC
T ss_pred CcCCCcEECCC----CCEECHHHCcC
Confidence 58899999873 78887765444
No 7
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=39.33 E-value=29 Score=21.14 Aligned_cols=17 Identities=18% Similarity=0.526 Sum_probs=11.9
Q ss_pred eCCCCCCccccCCCCCC
Q psy2017 137 QGCQVGEVYNEESQKCD 153 (255)
Q Consensus 137 ~~Cp~G~~Fd~~~~~C~ 153 (255)
+.||.+.+|+.=...|.
T Consensus 2 ~~Cp~n~~y~~Cgs~C~ 18 (60)
T 1hx2_A 2 FVCPPGQTFQTCASSCP 18 (60)
T ss_dssp CCCCTTEEEESSCCSSC
T ss_pred CcCcCCCEeccccCcCc
Confidence 47899988887544444
No 8
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=35.08 E-value=15 Score=22.30 Aligned_cols=19 Identities=37% Similarity=0.754 Sum_probs=15.4
Q ss_pred eeCCCCCeeeCCCCcccCCC
Q psy2017 58 IICPTGLHFDEYTGTCVWPE 77 (255)
Q Consensus 58 ~~Cp~g~~Fd~~~~~C~~~~ 77 (255)
=.|++|++.|.. +.|+.+.
T Consensus 36 C~C~~G~v~~~~-g~CV~~~ 54 (56)
T 1ccv_A 36 CQCQEGFLRNGE-GACVLPE 54 (56)
T ss_dssp EEECTTCEEETT-TEEECGG
T ss_pred CcCCCCeeECCC-CcccChh
Confidence 489999999875 7898754
No 9
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=27.31 E-value=24 Score=23.13 Aligned_cols=20 Identities=35% Similarity=0.722 Sum_probs=17.1
Q ss_pred eCCCCCeeeCCCCcccCCCc
Q psy2017 59 ICPTGLHFDEYTGTCVWPES 78 (255)
Q Consensus 59 ~Cp~g~~Fd~~~~~C~~~~~ 78 (255)
.|+.|+|.|...+.|+.+..
T Consensus 50 ~C~~G~vr~~~~g~CV~~~~ 69 (78)
T 2p3f_N 50 VCKDGFYRDTVIGDCVREEE 69 (78)
T ss_dssp EECSSCEEETTTTEEECGGG
T ss_pred CcCCCEeEcCCCCceECHHH
Confidence 78999999987799998654
No 10
>2b5b_A Defensin; antibiotic; NMR {Caretta caretta}
Probab=24.52 E-value=16 Score=19.32 Aligned_cols=12 Identities=17% Similarity=0.603 Sum_probs=9.7
Q ss_pred CcCCCccEEcCC
Q psy2017 41 EKVCNIFYNCIE 52 (255)
Q Consensus 41 p~~C~~y~~C~~ 52 (255)
|.+|.+|+-|+.
T Consensus 21 pyncgkyiccvp 32 (36)
T 2b5b_A 21 PYNCGKYICCVP 32 (36)
T ss_dssp SSSBCCSSCSSS
T ss_pred CccCCceEEeEE
Confidence 459999998874
No 11
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=22.84 E-value=26 Score=18.51 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=10.4
Q ss_pred ceeCCCCCCcccc
Q psy2017 135 REQGCQVGEVYNE 147 (255)
Q Consensus 135 ~~~~Cp~G~~Fd~ 147 (255)
...+||.|.+||.
T Consensus 14 srsncpkgkvwng 26 (36)
T 1iyc_A 14 SRSNCPKGKVWNG 26 (36)
T ss_dssp TTSCCCSSCEEET
T ss_pred eccCCCCcceecC
Confidence 3458999999986
No 12
>1bx7_A Hirustasin; anti-coagulant, peptidic inhibitors, conformational flexibility, serine protease inhibitor; 1.20A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1bx8_A 1hia_I
Probab=21.20 E-value=1.3e+02 Score=18.06 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=23.3
Q ss_pred CcCCcccEEccCCe------eEeccCCCCCccCcCCCCCCCCCCC
Q psy2017 203 PVQCDKYYECFDGQ------ATEKLCPDGLVFDPLNRKINKCDQP 241 (255)
Q Consensus 203 ~~~C~~y~~C~~g~------~~~~~Cp~G~~Fd~~~~~~~~C~~~ 241 (255)
+..|+.=-+|..++ .-.+.||.|+.=|+ .-|+++
T Consensus 8 ~~tcs~aq~c~~~kcvC~~~~Cri~Cp~GFk~De-----NGCe~~ 47 (55)
T 1bx7_A 8 GETCSAAQVCLKGKCVCNEVHCRIRCKYGLKKDE-----NGCEYP 47 (55)
T ss_dssp TBCCCTTEEEETTEEEECCCCCCCCCTTCBCCCT-----TSCCCS
T ss_pred ccccChhhEEecCcEEeehhheEEeCCCcceECC-----CCCcce
Confidence 34555556666554 23689999999998 577764
Done!