Your job contains 1 sequence.
>psy2029
MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF
KFYLEGKCLEMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKY
QSLAKAAEEFKFYLEVLE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2029
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J9P160 - symbol:HELQ "Uncharacterized protein" ... 165 4.3e-13 3
UNIPROTKB|E2RST3 - symbol:HELQ "Uncharacterized protein" ... 165 4.9e-13 3
MGI|MGI:2176740 - symbol:Helq "helicase, POLQ-like" speci... 172 2.5e-12 2
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab... 168 2.9e-12 2
UNIPROTKB|Q8TDG4 - symbol:HELQ "Helicase POLQ-like" speci... 161 3.1e-12 3
ZFIN|ZDB-GENE-060503-421 - symbol:helq "helicase, POLQ-li... 174 6.2e-12 1
UNIPROTKB|E9PSY5 - symbol:Helq "Protein Helq" species:101... 172 7.5e-12 1
UNIPROTKB|E9PT19 - symbol:Helq "Protein Helq" species:101... 172 8.5e-12 1
UNIPROTKB|F1RVE2 - symbol:HELQ "Uncharacterized protein" ... 170 9.0e-12 2
FB|FBgn0002899 - symbol:mus301 "mutagen-sensitive 301" sp... 170 1.8e-11 1
UNIPROTKB|E3W982 - symbol:HELQ "Helicase POLQ-like" speci... 161 5.2e-11 1
UNIPROTKB|E3W980 - symbol:HELQ "Helicase POLQ-like" speci... 146 8.9e-11 3
UNIPROTKB|F1NYH9 - symbol:HELQ "Uncharacterized protein" ... 163 9.1e-11 1
UNIPROTKB|F1NMU1 - symbol:POLQ "Uncharacterized protein" ... 150 2.0e-09 1
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO... 149 3.7e-09 1
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 146 1.8e-08 1
UNIPROTKB|E1BMC0 - symbol:POLQ "Uncharacterized protein" ... 146 1.9e-08 1
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71... 145 2.3e-08 1
UNIPROTKB|D4A2B2 - symbol:Polq "Protein Polq" species:101... 143 3.2e-08 1
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the... 143 3.6e-08 1
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)... 143 3.7e-08 1
UNIPROTKB|F1PXD9 - symbol:POLQ "Uncharacterized protein" ... 137 1.1e-07 1
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 107 2.3e-06 3
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 107 2.3e-06 3
FB|FBgn0002905 - symbol:mus308 "mutagen-sensitive 308" sp... 117 4.5e-06 2
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 102 2.0e-05 2
GENEDB_PFALCIPARUM|PF14_0234 - symbol:PF14_0234 "DNA-dire... 107 0.00011 1
UNIPROTKB|Q8ILK9 - symbol:PF14_0234 "DNA-directed DNA pol... 107 0.00011 1
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 105 0.00020 1
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 100 0.00053 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 100 0.00090 1
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 100 0.00090 1
>UNIPROTKB|J9P160 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 CTD:113510 EMBL:AAEX03016730 RefSeq:XP_544959.2
Ensembl:ENSCAFT00000044378 GeneID:487837 KEGG:cfa:487837
Uniprot:J9P160
Length = 1072
Score = 165 (63.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 43/124 (34%), Positives = 72/124 (58%)
Query: 22 EILIMKELKIKQK----SAIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEM--I 72
E L+ +E+ + +K S+ + P+ SL V + Y K E+ + + CL + +
Sbjct: 264 ETLLSEEINVAKKAIESSSDDLGPFYSLPTKVRDLYVQF-KGIEKL-YEWQHTCLTLNSV 321
Query: 73 QN-KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFK 131
Q KN + S+PTSGGKTLV EIL+++EL +++ + ILPY+++V EK L+ E
Sbjct: 322 QERKNLIYSLPTSGGKTLVAEILMLQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELG 381
Query: 132 FYLE 135
F++E
Sbjct: 382 FFVE 385
Score = 155 (59.6 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +++ + ILPY+++V EK L+ E F
Sbjct: 323 ERKNLIYSLPTSGGKTLVAEILMLQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELGF 382
Query: 63 YLE 65
++E
Sbjct: 383 FVE 385
Score = 40 (19.1 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 63 YLEGKCLEMIQNKNCVLSIPTSGGKTLVGEIL---IMKE-LKIKQK 104
+L E+I N +C++ PT V E++ + K+ LK ++K
Sbjct: 538 HLVALATEVIPNHSCLVFCPTKKNCENVAEMICRFLSKQYLKHREK 583
Score = 37 (18.1 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 115 LVHEKYQSLAKAAEE 129
L+HEK ++L + EE
Sbjct: 1040 LLHEKAEALQEEVEE 1054
>UNIPROTKB|E2RST3 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 OMA:SRPLENC EMBL:AAEX03016730
Ensembl:ENSCAFT00000014486 Uniprot:E2RST3
Length = 1106
Score = 165 (63.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 43/124 (34%), Positives = 72/124 (58%)
Query: 22 EILIMKELKIKQK----SAIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEM--I 72
E L+ +E+ + +K S+ + P+ SL V + Y K E+ + + CL + +
Sbjct: 298 ETLLSEEINVAKKAIESSSDDLGPFYSLPTKVRDLYVQF-KGIEKL-YEWQHTCLTLNSV 355
Query: 73 QN-KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFK 131
Q KN + S+PTSGGKTLV EIL+++EL +++ + ILPY+++V EK L+ E
Sbjct: 356 QERKNLIYSLPTSGGKTLVAEILMLQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELG 415
Query: 132 FYLE 135
F++E
Sbjct: 416 FFVE 419
Score = 155 (59.6 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +++ + ILPY+++V EK L+ E F
Sbjct: 357 ERKNLIYSLPTSGGKTLVAEILMLQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELGF 416
Query: 63 YLE 65
++E
Sbjct: 417 FVE 419
Score = 40 (19.1 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 63 YLEGKCLEMIQNKNCVLSIPTSGGKTLVGEIL---IMKE-LKIKQK 104
+L E+I N +C++ PT V E++ + K+ LK ++K
Sbjct: 572 HLVALATEVIPNHSCLVFCPTKKNCENVAEMICRFLSKQYLKHREK 617
Score = 37 (18.1 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 115 LVHEKYQSLAKAAEE 129
L+HEK ++L + EE
Sbjct: 1074 LLHEKAEALQEEVEE 1088
>MGI|MGI:2176740 [details] [associations]
symbol:Helq "helicase, POLQ-like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
[GO:0017117 "single-stranded DNA-dependent ATP-dependent DNA
helicase complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR010995 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2176740 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
SUPFAM:SSF47794 GO:GO:0017116 CTD:113510 OMA:SRPLENC
OrthoDB:EOG4THVSJ EMBL:BC082601 EMBL:BC109169 EMBL:BC109170
EMBL:AK052427 EMBL:AF436846 IPI:IPI00226287 IPI:IPI00886160
IPI:IPI00890018 RefSeq:NP_001074576.1 UniGene:Mm.21469
ProteinModelPortal:Q2VPA6 SMR:Q2VPA6 STRING:Q2VPA6
PhosphoSite:Q2VPA6 PRIDE:Q2VPA6 Ensembl:ENSMUST00000044684
GeneID:191578 KEGG:mmu:191578 UCSC:uc008yhz.1 UCSC:uc012dzs.1
HOGENOM:HOG000110747 InParanoid:Q2VPA6 NextBio:371088 Bgee:Q2VPA6
Genevestigator:Q2VPA6 GO:GO:0017117 Uniprot:Q2VPA6
Length = 1069
Score = 172 (65.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 22 EILIMKELKIKQKS----AIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEMIQN 74
E L+ +E+ + +K+ + + P+ SL V + Y L + + + L +Q
Sbjct: 251 EALLSEEISVAKKAIESPSDDLGPFYSLPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQE 310
Query: 75 -KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKFY 133
KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F+
Sbjct: 311 RKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGFF 370
Query: 134 LE 135
+E
Sbjct: 371 VE 372
Score = 166 (63.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F
Sbjct: 310 ERKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGF 369
Query: 63 YLE 65
++E
Sbjct: 370 FVE 372
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 115 LVHEKYQSLAKAAEE 129
L+HEK ++L AEE
Sbjct: 1026 LLHEKAEALQGEAEE 1040
>WB|WBGene00021905 [details] [associations]
symbol:helq-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
WormBase:Y55B1AL.3a Uniprot:H2KY86
Length = 923
Score = 168 (64.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 33/92 (35%), Positives = 59/92 (64%)
Query: 48 EKYQSLAKAAEEFKFY-LEGKCLE---MIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQ 103
E Y+ + K KFY + +CL ++ +NC+LS+PT GKTL+ E+L+++E +++
Sbjct: 157 EMYRKIKKLD---KFYDWQQECLSDKRLLDGENCILSLPTGAGKTLIAEVLMLREAIVRK 213
Query: 104 KSAIFILPYISLVHEKYQSLAKAAEEFKFYLE 135
++AI +LPY+++V EK +LA + F +E
Sbjct: 214 RNAILVLPYVAIVQEKISALAPFEDAFGINIE 245
Score = 157 (60.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 25/65 (38%), Positives = 47/65 (72%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
++ +NC+LS+PT GKTL+ E+L+++E +++++AI +LPY+++V EK +LA + F
Sbjct: 181 LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAF 240
Query: 61 KFYLE 65
+E
Sbjct: 241 GINIE 245
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 107 IFILPYISLVHEKYQSLAKAAEEFKFYLEVL 137
+F+L Y +L + + LA+ E KF LE +
Sbjct: 720 LFLLMYNALPSSERKLLAECGLEEKFILEAI 750
>UNIPROTKB|Q8TDG4 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AF436845 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GO:GO:0008026 EMBL:AK128665
EMBL:AC096768 EMBL:BC015428 EMBL:BC095473 EMBL:AL512702
IPI:IPI00152527 IPI:IPI00647582 IPI:IPI00807650 IPI:IPI00889496
RefSeq:NP_598375.2 UniGene:Hs.480101 ProteinModelPortal:Q8TDG4
SMR:Q8TDG4 IntAct:Q8TDG4 STRING:Q8TDG4 PhosphoSite:Q8TDG4
DMDM:296434521 PaxDb:Q8TDG4 PRIDE:Q8TDG4 DNASU:113510
Ensembl:ENST00000295488 GeneID:113510 KEGG:hsa:113510
UCSC:uc003hom.3 UCSC:uc003hoo.1 UCSC:uc003hop.1 CTD:113510
GeneCards:GC04M084328 HGNC:HGNC:18536 HPA:HPA036853 MIM:606769
neXtProt:NX_Q8TDG4 PharmGKB:PA164720529 InParanoid:Q8TDG4
OMA:SRPLENC OrthoDB:EOG4THVSJ PhylomeDB:Q8TDG4 GenomeRNAi:113510
NextBio:78853 ArrayExpress:Q8TDG4 Bgee:Q8TDG4 Genevestigator:Q8TDG4
Uniprot:Q8TDG4
Length = 1101
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 43/124 (34%), Positives = 71/124 (57%)
Query: 22 EILIMKELKIKQK----SAIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEM--I 72
+ L+ +E+ + +K S+ + P+ SL V + Y K E+ + + CL + +
Sbjct: 292 DTLLSEEINVAKKTVESSSNDLGPFYSLPSKVRDLYAQF-KGIEKL-YEWQHTCLTLNSV 349
Query: 73 QN-KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFK 131
Q KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK L+ E
Sbjct: 350 QERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGIELG 409
Query: 132 FYLE 135
F++E
Sbjct: 410 FFVE 413
Score = 153 (58.9 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK L+ E F
Sbjct: 351 ERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGIELGF 410
Query: 63 YLE 65
++E
Sbjct: 411 FVE 413
Score = 37 (18.1 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 115 LVHEKYQSLAKAAEE 129
L+HEK ++L + EE
Sbjct: 1068 LLHEKAEALQEEVEE 1082
Score = 34 (17.0 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 63 YLEGKCLEMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
Y+ + L+ Q K + +G T+ ILI++E K KQ+
Sbjct: 690 YVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQ 730
>ZFIN|ZDB-GENE-060503-421 [details] [associations]
symbol:helq "helicase, POLQ-like" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR010995 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060503-421 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
EMBL:BX649525 CTD:113510 IPI:IPI00799443 RefSeq:XP_691411.3
UniGene:Dr.86132 Ensembl:ENSDART00000109412 GeneID:562952
KEGG:dre:562952 NextBio:20884669 Uniprot:F1Q4P2
Length = 1010
Score = 174 (66.3 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
Q +N + S+PTSGGKTLV EILI KEL ++K A+ ILPYISLV EK + L+ E F
Sbjct: 272 QRRNLIYSLPTSGGKTLVAEILIFKELLCRKKDALLILPYISLVQEKVRGLSSFGIELDF 331
Query: 63 YLE------GKCLEMIQ-NKNCVLSIPTSGGKTLVGEIL 94
+E GK + + NKN + G +LV ++
Sbjct: 332 LVEEYAGSKGKFPPVKRRNKNSLYITTIEKGHSLVNSLI 370
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 73 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 132
Q +N + S+PTSGGKTLV EILI KEL ++K A+ ILPYISLV EK + L+ E F
Sbjct: 272 QRRNLIYSLPTSGGKTLVAEILIFKELLCRKKDALLILPYISLVQEKVRGLSSFGIELDF 331
Query: 133 YLE 135
+E
Sbjct: 332 LVE 334
>UNIPROTKB|E9PSY5 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1560216 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI01007603 Ensembl:ENSRNOT00000031633 ArrayExpress:E9PSY5
Uniprot:E9PSY5
Length = 805
Score = 172 (65.6 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 43/122 (35%), Positives = 69/122 (56%)
Query: 22 EILIMKELKIKQKS----AIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEMIQN 74
E L+ +E+ + +K+ + + P+ SL V + Y L + + L +Q
Sbjct: 247 ETLLSEEISVARKAIESPSDDLGPFYSLPSKVRDLYAQLKGIKRLYDWQHTCLTLSSVQE 306
Query: 75 -KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKFY 133
KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F+
Sbjct: 307 RKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGFF 366
Query: 134 LE 135
+E
Sbjct: 367 VE 368
Score = 166 (63.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F
Sbjct: 306 ERKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGF 365
Query: 63 YLE 65
++E
Sbjct: 366 FVE 368
>UNIPROTKB|E9PT19 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1560216
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 IPI:IPI00958253 Ensembl:ENSRNOT00000002974
ArrayExpress:E9PT19 Uniprot:E9PT19
Length = 879
Score = 172 (65.6 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 43/122 (35%), Positives = 69/122 (56%)
Query: 22 EILIMKELKIKQKS----AIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEMIQN 74
E L+ +E+ + +K+ + + P+ SL V + Y L + + L +Q
Sbjct: 247 ETLLSEEISVARKAIESPSDDLGPFYSLPSKVRDLYAQLKGIKRLYDWQHTCLTLSSVQE 306
Query: 75 -KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKFY 133
KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F+
Sbjct: 307 RKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGFF 366
Query: 134 LE 135
+E
Sbjct: 367 VE 368
Score = 166 (63.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +QK + ILPY+++V EK SL+ E F
Sbjct: 306 ERKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGF 365
Query: 63 YLE 65
++E
Sbjct: 366 FVE 368
>UNIPROTKB|F1RVE2 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:CU467102 EMBL:CU468150 Ensembl:ENSSSCT00000010115
Uniprot:F1RVE2
Length = 1103
Score = 170 (64.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/122 (36%), Positives = 71/122 (58%)
Query: 22 EILIMKELKIKQK----SAIFILPYISLVHEKYQSLAKAAEEFKFY-LEGKCLEM--IQN 74
E L+ +E+ + +K S+ + P+ SL + A+ K Y + CL + +Q
Sbjct: 294 ETLLSEEINVAKKTIASSSDDLGPFYSLPSKVRDLYAQFRGIEKLYEWQHTCLTLKSVQE 353
Query: 75 -KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKFY 133
KN + S+PTSGGKTLV EIL+++EL ++K A+ ILPY+++V EK L+ E F+
Sbjct: 354 RKNLIYSLPTSGGKTLVAEILMLQELLCRRKDALMILPYVAIVQEKIAGLSSFGIELGFF 413
Query: 134 LE 135
+E
Sbjct: 414 VE 415
Score = 161 (61.7 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL ++K A+ ILPY+++V EK L+ E F
Sbjct: 353 ERKNLIYSLPTSGGKTLVAEILMLQELLCRRKDALMILPYVAIVQEKIAGLSSFGIELGF 412
Query: 63 YLE 65
++E
Sbjct: 413 FVE 415
Score = 38 (18.4 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 92 EILIMKELKIKQKSAIFILPYIS-LVHEKYQSLAKAAEE 129
E+LI + ++ A I+ L+HEK ++L + EE
Sbjct: 1046 EVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEEVEE 1084
>FB|FBgn0002899 [details] [associations]
symbol:mus301 "mutagen-sensitive 301" species:7227
"Drosophila melanogaster" [GO:0007294 "germarium-derived oocyte
fate determination" evidence=IGI;IMP] [GO:0008298 "intracellular
mRNA localization" evidence=IMP;TAS] [GO:0048477 "oogenesis"
evidence=IGI;TAS] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009949 GO:GO:0007294 EMBL:AE014296 GO:GO:0006417
GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 GO:GO:0008298
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0030717 GO:GO:0016321
GO:GO:0008026 OMA:SRPLENC GO:GO:0009951 EMBL:BT011090
RefSeq:NP_648178.1 UniGene:Dm.15493 SMR:Q9VSE2 IntAct:Q9VSE2
STRING:Q9VSE2 EnsemblMetazoa:FBtr0076689 GeneID:38905
KEGG:dme:Dmel_CG7972 UCSC:CG7972-RA CTD:38905 FlyBase:FBgn0002899
InParanoid:Q9VSE2 OrthoDB:EOG4MKKXB GenomeRNAi:38905 NextBio:810944
Uniprot:Q9VSE2
Length = 1051
Score = 170 (64.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 40/124 (32%), Positives = 72/124 (58%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
Q KN + ++PTSGGKTLV EIL+++EL ++++ +FILPY+S+V EK +++ A + F
Sbjct: 279 QRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDF 338
Query: 63 YLE------GKCLEMIQNKNCVLSIPT-SGGKTLVGEILIMKELKIKQKSAIFILPYISL 115
+E GKC + K L I + G L+ ++ +++ + + ++ + L
Sbjct: 339 IVEEYTAGKGKCPPQPRRKRRSLFIASIEKGAVLMDSLI---DVQRPHEIGLVVVDELHL 395
Query: 116 VHEK 119
+ EK
Sbjct: 396 IGEK 399
Score = 164 (62.8 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 65 EGKCLEMI---QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQ 121
+ +CL + Q KN + ++PTSGGKTLV EIL+++EL ++++ +FILPY+S+V EK
Sbjct: 268 QDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYVSIVQEKVS 327
Query: 122 SLAKAAEEFKFYLE 135
+++ A + F +E
Sbjct: 328 AMSPFAIDLDFIVE 341
>UNIPROTKB|E3W982 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC096768 HGNC:HGNC:18536 IPI:IPI00965450
ProteinModelPortal:E3W982 SMR:E3W982 Ensembl:ENST00000508591
UCSC:uc003hon.1 ArrayExpress:E3W982 Bgee:E3W982 Uniprot:E3W982
Length = 489
Score = 161 (61.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 43/124 (34%), Positives = 71/124 (57%)
Query: 22 EILIMKELKIKQK----SAIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEM--I 72
+ L+ +E+ + +K S+ + P+ SL V + Y K E+ + + CL + +
Sbjct: 292 DTLLSEEINVAKKTVESSSNDLGPFYSLPSKVRDLYAQF-KGIEKL-YEWQHTCLTLNSV 349
Query: 73 QN-KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFK 131
Q KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK L+ E
Sbjct: 350 QERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGIELG 409
Query: 132 FYLE 135
F++E
Sbjct: 410 FFVE 413
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
+ KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK L+ E F
Sbjct: 351 ERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGIELGF 410
Query: 63 YLE 65
++E
Sbjct: 411 FVE 413
>UNIPROTKB|E3W980 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 GO:GO:0004386 EMBL:AC096768
HGNC:HGNC:18536 IPI:IPI00965172 ProteinModelPortal:E3W980
SMR:E3W980 Ensembl:ENST00000510985 UCSC:uc010ikb.3
ArrayExpress:E3W980 Bgee:E3W980 Uniprot:E3W980
Length = 1034
Score = 146 (56.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 39/116 (33%), Positives = 67/116 (57%)
Query: 22 EILIMKELKIKQK----SAIFILPYISL---VHEKYQSLAKAAEEFKFYLEGKCLEM--I 72
+ L+ +E+ + +K S+ + P+ SL V + Y K E+ + + CL + +
Sbjct: 292 DTLLSEEINVAKKTVESSSNDLGPFYSLPSKVRDLYAQF-KGIEKL-YEWQHTCLTLNSV 349
Query: 73 QN-KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAA 127
Q KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK + + +
Sbjct: 350 QERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKLHMIGEGS 405
Score = 138 (53.6 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAA 57
+ KN + S+PTSGGKTLV EIL+++EL +K + ILPY+++V EK + + +
Sbjct: 351 ERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKLHMIGEGS 405
Score = 37 (18.1 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 115 LVHEKYQSLAKAAEE 129
L+HEK ++L + EE
Sbjct: 1001 LLHEKAEALQEEVEE 1015
Score = 34 (17.0 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 63 YLEGKCLEMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
Y+ + L+ Q K + +G T+ ILI++E K KQ+
Sbjct: 623 YVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQ 663
>UNIPROTKB|F1NYH9 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:AADN02009041 IPI:IPI00596471
Ensembl:ENSGALT00000018274 Uniprot:F1NYH9
Length = 995
Score = 163 (62.4 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 43/123 (34%), Positives = 68/123 (55%)
Query: 22 EILIMKELKIKQK----SAIFILPYISLVHEKYQSLAKAAEEFKFYLEGK--CL---EMI 72
E ++ +E+ + ++ S+ I P+ L K + L + + E + CL +
Sbjct: 199 EAILSEEISVARETIGSSSFDIGPFYGLP-SKVKHLLRQFRGIETLYEWQHDCLTLKSLQ 257
Query: 73 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 132
Q KN + S+PTSGGKTLV EILI++EL +QK + ILPY+++V EK L+ E F
Sbjct: 258 QRKNLIYSLPTSGGKTLVAEILILQELLCRQKDVLMILPYVAIVQEKVWGLSSFGIELGF 317
Query: 133 YLE 135
+E
Sbjct: 318 LVE 320
Score = 162 (62.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
Q KN + S+PTSGGKTLV EILI++EL +QK + ILPY+++V EK L+ E F
Sbjct: 258 QRKNLIYSLPTSGGKTLVAEILILQELLCRQKDVLMILPYVAIVQEKVWGLSSFGIELGF 317
Query: 63 YLE 65
+E
Sbjct: 318 LVE 320
>UNIPROTKB|F1NMU1 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
Length = 904
Score = 150 (57.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY SL + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 45 VLEKYHSLG-VVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRK 103
Query: 105 SAIFILPYISLVHEK 119
A+FILP++S+ EK
Sbjct: 104 KALFILPFVSVAKEK 118
Score = 130 (50.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEK 49
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK
Sbjct: 70 VLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEK 118
>DICTYBASE|DDB_G0279107 [details] [associations]
symbol:DDB_G0279107 "Helicase POLQ-like"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
ProtClustDB:CLSZ2430718 Uniprot:Q54X98
Length = 1238
Score = 149 (57.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
++ +N + S+PTSGGKTLV EI++ + L IK K ++FI P++S+V EK +S+ + +
Sbjct: 467 LLLGENLIYSLPTSGGKTLVAEIILFRNLLIKNKKSLFIFPFVSIVCEKTESMHEFSSAL 526
Query: 61 KFYLEGKCLEMIQNKNCVLSIPTSGGKTLV 90
+ +EG C +IP GK L+
Sbjct: 527 QIPVEGY-------HGCNGTIPVLPGKRLL 549
Score = 144 (55.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 67 KCLE---MIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSL 123
+CL ++ +N + S+PTSGGKTLV EI++ + L IK K ++FI P++S+V EK +S+
Sbjct: 460 ECLSDSNLLLGENLIYSLPTSGGKTLVAEIILFRNLLIKNKKSLFIFPFVSIVCEKTESM 519
Query: 124 AKAAEEFKFYLE 135
+ + + +E
Sbjct: 520 HEFSSALQIPVE 531
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY S + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 80 VLEKYHSFG-VKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRK 138
Query: 105 SAIFILPYISLVHEKYQSLAKAAEE 129
A+FILP++S+ EK L +E
Sbjct: 139 KALFILPFVSVAKEKKYYLQSLFQE 163
Score = 136 (52.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK L +E
Sbjct: 105 VLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEV 164
Query: 61 KFYLEG 66
++G
Sbjct: 165 GIKVDG 170
>UNIPROTKB|E1BMC0 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
Uniprot:E1BMC0
Length = 2728
Score = 146 (56.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY S + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 212 VLEKYHSFG-VKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRK 270
Query: 105 SAIFILPYISLVHEKYQSLAKAAEE 129
A+FILP++S+ EK L +E
Sbjct: 271 KALFILPFVSVAKEKKYYLQSLFQE 295
Score = 136 (52.9 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK L +E
Sbjct: 237 VLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEV 296
Query: 61 KFYLEG 66
++G
Sbjct: 297 GIKVDG 302
Score = 33 (16.7 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 109 ILPYISLVHEKYQSLAKAAEEFKFYLEV 136
+L I + + Y S K EF+ L+V
Sbjct: 424 LLESIKIGNSIYDSSMKLVREFQPMLQV 451
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 145 (56.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKE-LKIKQ 103
V EKYQSL F++ E L ++++ +N V S PTS GKTLV E+LI+K L+ +Q
Sbjct: 287 VLEKYQSLG-VHRMFEWQAECLTLGKVLEGQNLVYSAPTSAGKTLVSELLILKRVLETRQ 345
Query: 104 KSAIFILPYISLVHEKYQSLAKAAEE 129
K A+FILP++S+ EK L +E
Sbjct: 346 K-AMFILPFVSVAREKMFYLQNVFQE 370
Score = 131 (51.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKE-LKIKQKSAIFILPYISLVHEKYQSLAKAAEE 59
+++ +N V S PTS GKTLV E+LI+K L+ +QK A+FILP++S+ EK L +E
Sbjct: 312 VLEGQNLVYSAPTSAGKTLVSELLILKRVLETRQK-AMFILPFVSVAREKMFYLQNVFQE 370
Query: 60 FKFYLEG 66
+EG
Sbjct: 371 AGIRVEG 377
>UNIPROTKB|D4A2B2 [details] [associations]
symbol:Polq "Protein Polq" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR019760
Pfam:PF00270 Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00482 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0008026 GO:GO:0003887 IPI:IPI00391259
ProteinModelPortal:D4A2B2 Ensembl:ENSRNOT00000034851 Uniprot:D4A2B2
Length = 2261
Score = 143 (55.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY + + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 81 VLEKYHNFG-VKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRK 139
Query: 105 SAIFILPYISLVHEKYQSLAKAAEE 129
A+FILP++S+ EK L +E
Sbjct: 140 KALFILPFVSVAKEKKYYLQSLFQE 164
Score = 136 (52.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK L +E
Sbjct: 106 VLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEKKYYLQSLFQEV 165
Query: 61 KFYLEG 66
++G
Sbjct: 166 GIKVDG 171
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 143 (55.4 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY + + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 81 VLEKYHNFG-VKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRK 139
Query: 105 SAIFILPYISLVHEKYQSLAKAAEE 129
A+FILP++S+ EK L +E
Sbjct: 140 KALFILPFVSVAKEKKYYLQSLFQE 164
Score = 136 (52.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK L +E
Sbjct: 106 VLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEKKYYLQSLFQEV 165
Query: 61 KFYLEG 66
++G
Sbjct: 166 GIKVDG 171
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 143 (55.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 46 VHEKYQSLAKAAEEFKFYLEGKCL-EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQK 104
V EKY + + F++ E L ++++ KN V S PTS GKTLV E+LI+K + +K
Sbjct: 81 VLEKYHNFG-VKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRK 139
Query: 105 SAIFILPYISLVHEKYQSLAKAAEE 129
A+FILP++S+ EK L +E
Sbjct: 140 KALFILPFVSVAKEKKYYLQSLFQE 164
Score = 136 (52.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+LI+K + +K A+FILP++S+ EK L +E
Sbjct: 106 VLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEKKYYLQSLFQEV 165
Query: 61 KFYLEG 66
++G
Sbjct: 166 GIKVDG 171
>UNIPROTKB|F1PXD9 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AAEX03017021 Ensembl:ENSCAFT00000018256
OMA:NECHITF Uniprot:F1PXD9
Length = 1835
Score = 137 (53.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 62 FYLEGKCL---EMIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHE 118
F + +CL ++++ KN V S PTS GKTLV E+L++K + +K A+FILP++S+ E
Sbjct: 2 FEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLMLKRVLEMRKKALFILPFVSVAKE 61
Query: 119 KYQSLAKAAEE 129
K L +E
Sbjct: 62 KKYYLQSLFQE 72
Score = 134 (52.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLAKAAEEF 60
+++ KN V S PTS GKTLV E+L++K + +K A+FILP++S+ EK L +E
Sbjct: 14 VLEGKNLVYSAPTSAGKTLVAELLMLKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEI 73
Query: 61 KFYLEG 66
++G
Sbjct: 74 GINVDG 79
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKEL-KIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
++N +L PT GKT++GE+ I++ L + + + +++I P ++V+E+Y+S +FK
Sbjct: 1386 DENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPMKAIVNERYKSWKS---KFKS 1442
Query: 63 YLEGKCLEMIQNKN 76
+E+ +KN
Sbjct: 1443 LFNKNVIELTGDKN 1456
Score = 100 (40.3 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 21/66 (31%), Positives = 43/66 (65%)
Query: 74 NKNCVLSIPTSGGKTLVGEILIMKEL-KIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 132
++N +L PT GKT++GE+ I++ L + + + +++I P ++V+E+Y+S K+ + F
Sbjct: 1386 DENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPMKAIVNERYKSW-KSKFKSLF 1444
Query: 133 YLEVLE 138
V+E
Sbjct: 1445 NKNVIE 1450
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKEL 29
NKN ++ PT GKT + ++I++++
Sbjct: 355 NKNLLVCAPTGCGKTNIALLVILQQI 380
Score = 35 (17.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 61 KFYLEGKCLEMIQNK 75
K Y++GK LE +N+
Sbjct: 96 KEYVDGKVLENEENE 110
Score = 34 (17.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 6/33 (18%), Positives = 16/33 (48%)
Query: 44 SLVHEKYQSLAKAAEEFKFYLEGKCLEMIQNKN 76
S + Y + + + + YL+ + +++ KN
Sbjct: 1159 SNTYNNYSNNNRRNQNYTVYLKEAAVNILEKKN 1191
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKEL-KIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 62
++N +L PT GKT++GE+ I++ L + + + +++I P ++V+E+Y+S +FK
Sbjct: 1386 DENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPMKAIVNERYKSWKS---KFKS 1442
Query: 63 YLEGKCLEMIQNKN 76
+E+ +KN
Sbjct: 1443 LFNKNVIELTGDKN 1456
Score = 100 (40.3 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 21/66 (31%), Positives = 43/66 (65%)
Query: 74 NKNCVLSIPTSGGKTLVGEILIMKEL-KIKQKSAIFILPYISLVHEKYQSLAKAAEEFKF 132
++N +L PT GKT++GE+ I++ L + + + +++I P ++V+E+Y+S K+ + F
Sbjct: 1386 DENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPMKAIVNERYKSW-KSKFKSLF 1444
Query: 133 YLEVLE 138
V+E
Sbjct: 1445 NKNVIE 1450
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKEL 29
NKN ++ PT GKT + ++I++++
Sbjct: 355 NKNLLVCAPTGCGKTNIALLVILQQI 380
Score = 35 (17.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 61 KFYLEGKCLEMIQNK 75
K Y++GK LE +N+
Sbjct: 96 KEYVDGKVLENEENE 110
Score = 34 (17.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 6/33 (18%), Positives = 16/33 (48%)
Query: 44 SLVHEKYQSLAKAAEEFKFYLEGKCLEMIQNKN 76
S + Y + + + + YL+ + +++ KN
Sbjct: 1159 SNTYNNYSNNNRRNQNYTVYLKEAAVNILEKKN 1191
>FB|FBgn0002905 [details] [associations]
symbol:mus308 "mutagen-sensitive 308" species:7227
"Drosophila melanogaster" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
Length = 2059
Score = 117 (46.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 71 MIQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEK 119
+ ++ N V S PTS GKTLV EIL++K + + K + ILP+IS+V EK
Sbjct: 246 LFEHCNLVYSAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISVVREK 294
Score = 116 (45.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 1 MVQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEK 49
+ ++ N V S PTS GKTLV EIL++K + + K + ILP+IS+V EK
Sbjct: 246 LFEHCNLVYSAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISVVREK 294
Score = 34 (17.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 47 HEKYQSLAKAAEEFKFYLEGK 67
HE AK FY+ GK
Sbjct: 970 HENADEAAKRNVVRNFYITGK 990
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 67 KCLEM---IQNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSL 123
+CL++ +Q +N V TS GK+ V E+L+++ + K A+ +LPY+S+ EK + L
Sbjct: 521 ECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGKMALLVLPYVSICAEKAEHL 580
Score = 42 (19.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 9 LSIPTSGGKTLVGEILIMKELKIKQKSAIFILPY-ISLVHEK 49
LS+ SG +++VG KE ++K++S+ L I + H++
Sbjct: 150 LSLYCSGVQSVVGSPPHQKENELKRRSSSSSLAQDIQISHKR 191
>GENEDB_PFALCIPARUM|PF14_0234 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase,
putative" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLA---KAAEEF 60
NKN + ++ K + E K K+K FI S+ H + E+
Sbjct: 2 NKNWIKNLENIIDKNKIFEWDEKKNEKLKDVCKNFIKKDYSIHHYVTNPIIIDNYKKEKI 61
Query: 61 K--FYLEGKCLEMIQN------KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPY 112
K + + +CL ++ +N + PTSGGKTLV E+ I +E+K +K F+ P
Sbjct: 62 KELYEWQDECLRELRKVNWEKGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPL 121
Query: 113 ISLVHEK 119
SL++EK
Sbjct: 122 KSLINEK 128
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEK 49
+ +N + PTSGGKTLV E+ I +E+K +K F+ P SL++EK
Sbjct: 82 KGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPLKSLINEK 128
>UNIPROTKB|Q8ILK9 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 4 NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEKYQSLA---KAAEEF 60
NKN + ++ K + E K K+K FI S+ H + E+
Sbjct: 2 NKNWIKNLENIIDKNKIFEWDEKKNEKLKDVCKNFIKKDYSIHHYVTNPIIIDNYKKEKI 61
Query: 61 K--FYLEGKCLEMIQN------KNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPY 112
K + + +CL ++ +N + PTSGGKTLV E+ I +E+K +K F+ P
Sbjct: 62 KELYEWQDECLRELRKVNWEKGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPL 121
Query: 113 ISLVHEK 119
SL++EK
Sbjct: 122 KSLINEK 128
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 3 QNKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYISLVHEK 49
+ +N + PTSGGKTLV E+ I +E+K +K F+ P SL++EK
Sbjct: 82 KGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPLKSLINEK 128
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 105 (42.0 bits), Expect = 0.00020, P = 0.00020
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 2 VQNKNCVLSIPTSGGKTLVGE-ILIMKELKIKQKSAIF--ILPYISLVHEKYQSLAKAAE 58
+ NK V KT+ + +L+++E + I + P S VH + + A
Sbjct: 192 ITNKLIVEETIIENSKTINNDDVLVLEEFG-GDVNCIHKCVRPQ-SYVHNEIKEPLIPAR 249
Query: 59 EFKFYLEG---KCLEMIQ-NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIFILPYIS 114
+KF L+ K +E ++ N++ ++S TS GKT++ E I L+ KQ+ I+ P +
Sbjct: 250 TYKFELDTFQKKSIECLERNESVLVSAHTSAGKTVIAEYAIALGLRDKQR-VIYTSPIKA 308
Query: 115 LVHEKYQSLAKAAEEFK 131
L ++KY+ L EEFK
Sbjct: 309 LSNQKYRDLG---EEFK 322
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 100 (40.3 bits), Expect = 0.00053, P = 0.00053
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 53 LAKAAEEFKFYLEGKCLEMIQ----NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIF 108
+ KAA+E+ F L+ E IQ N++ ++S TS GKT+ E I L+ KQ+ IF
Sbjct: 127 VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQR-VIF 185
Query: 109 ILPYISLVHEKYQSLAKAAEEFK 131
P +L ++KY+ + EEF+
Sbjct: 186 TSPIKALSNQKYREMY---EEFQ 205
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 100 (40.3 bits), Expect = 0.00090, P = 0.00090
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 53 LAKAAEEFKFYLEGKCLEMIQ----NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIF 108
+ KAA+E+ F L+ E IQ N++ ++S TS GKT+ E I L+ KQ+ IF
Sbjct: 127 VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQR-VIF 185
Query: 109 ILPYISLVHEKYQSLAKAAEEFK 131
P +L ++KY+ + EEF+
Sbjct: 186 TSPIKALSNQKYREMY---EEFQ 205
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 100 (40.3 bits), Expect = 0.00090, P = 0.00090
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 53 LAKAAEEFKFYLEGKCLEMIQ----NKNCVLSIPTSGGKTLVGEILIMKELKIKQKSAIF 108
+ KAA+E+ F L+ E IQ N++ ++S TS GKT+ E I L+ KQ+ IF
Sbjct: 28 VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQR-VIF 86
Query: 109 ILPYISLVHEKYQSLAKAAEEFK 131
P +L ++KY+ + EEF+
Sbjct: 87 TSPIKALSNQKYREMY---EEFQ 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.41 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 464 (49 KB)
Total size of DFA: 96 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 13.72u 0.07s 13.79t Elapsed: 00:00:29
Total cpu time: 13.72u 0.07s 13.79t Elapsed: 00:00:33
Start: Thu Aug 15 13:14:21 2013 End: Thu Aug 15 13:14:54 2013