Query psy2033
Match_columns 124
No_of_seqs 134 out of 1064
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 22:35:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2033.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2033hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3arc_M Photosystem II reaction 22.7 97 0.0033 16.9 3.0 21 17-37 6-26 (36)
2 4ge6_A Tyrosine-protein phosph 12.3 78 0.0027 24.3 1.4 14 11-24 242-255 (314)
3 3arc_L Photosystem II reaction 9.5 2.7E+02 0.0092 15.1 3.5 17 14-30 13-29 (37)
4 1lyv_A Protein-tyrosine phosph 9.3 1.1E+02 0.0039 23.2 1.3 15 10-24 242-256 (306)
5 3s3e_A Tyrosine-protein phosph 8.6 1.3E+02 0.0044 23.1 1.4 14 11-24 244-257 (307)
6 3i36_A Vascular protein tyrosi 8.2 1.3E+02 0.0046 23.3 1.4 14 11-24 246-259 (342)
7 2r4g_A Telomerase reverse tran 7.9 3.5E+02 0.012 20.6 3.6 45 45-93 205-249 (267)
8 2hc1_A Receptor-type tyrosine- 7.7 1.5E+02 0.005 22.4 1.4 15 10-24 226-240 (291)
9 4grz_A Tyrosine-protein phosph 7.7 1.8E+02 0.0062 21.7 1.8 14 11-24 215-228 (288)
10 4az1_A Tyrosine specific prote 7.6 1.5E+02 0.0051 22.4 1.3 14 11-24 228-241 (302)
No 1
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=22.74 E-value=97 Score=16.91 Aligned_cols=21 Identities=14% Similarity=0.010 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q psy2033 17 EQQPPESLSGVVPAMHYGYVE 37 (124)
Q Consensus 17 ~~f~~lgl~g~vP~~h~~~~~ 37 (124)
..|++..++..+|....+.++
T Consensus 6 l~fiAt~Lfi~iPt~FLlilY 26 (36)
T 3arc_M 6 LGLIATALFVLVPSVFLIILY 26 (36)
T ss_dssp THHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 468899999999987777654
No 2
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=12.28 E-value=78 Score=24.34 Aligned_cols=14 Identities=21% Similarity=0.230 Sum_probs=11.9
Q ss_pred CCchhhHHHHHHHH
Q psy2033 11 LGAGQTEQQPPESL 24 (124)
Q Consensus 11 ~~~~Rt~~f~~lgl 24 (124)
-|.+||+.|+++-.
T Consensus 242 aGvGRTGtfiaid~ 255 (314)
T 4ge6_A 242 AGIGRTGTFCSLDI 255 (314)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 59999999998754
No 3
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=9.53 E-value=2.7e+02 Score=15.12 Aligned_cols=17 Identities=18% Similarity=-0.103 Sum_probs=11.6
Q ss_pred hhhHHHHHHHHHHHHHH
Q psy2033 14 GQTEQQPPESLSGVVPA 30 (124)
Q Consensus 14 ~Rt~~f~~lgl~g~vP~ 30 (124)
-||.+|.++-+.-+..+
T Consensus 13 NRTSLy~GLLlifvlav 29 (37)
T 3arc_L 13 NRTSLYLGLLLILVLAL 29 (37)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHH
Confidence 49999987766544443
No 4
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=9.32 E-value=1.1e+02 Score=23.23 Aligned_cols=15 Identities=27% Similarity=0.240 Sum_probs=12.2
Q ss_pred CCCchhhHHHHHHHH
Q psy2033 10 HLGAGQTEQQPPESL 24 (124)
Q Consensus 10 ~~~~~Rt~~f~~lgl 24 (124)
--|.+||+.|+++-.
T Consensus 242 SAGvGRTGtfiaid~ 256 (306)
T 1lyv_A 242 RAGVGRTAQLIGAMC 256 (306)
T ss_dssp SSSSSHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHH
Confidence 368999999998753
No 5
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=8.59 E-value=1.3e+02 Score=23.06 Aligned_cols=14 Identities=14% Similarity=0.114 Sum_probs=12.1
Q ss_pred CCchhhHHHHHHHH
Q psy2033 11 LGAGQTEQQPPESL 24 (124)
Q Consensus 11 ~~~~Rt~~f~~lgl 24 (124)
-|.+||+.|+++-.
T Consensus 244 aGvGRTGtfiaid~ 257 (307)
T 3s3e_A 244 AGVGRSGTFITLDR 257 (307)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHH
Confidence 69999999998764
No 6
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=8.21 E-value=1.3e+02 Score=23.31 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=12.2
Q ss_pred CCchhhHHHHHHHH
Q psy2033 11 LGAGQTEQQPPESL 24 (124)
Q Consensus 11 ~~~~Rt~~f~~lgl 24 (124)
-|.+||++|+++-.
T Consensus 246 AGvGRTGtfiaid~ 259 (342)
T 3i36_A 246 AGVGRTGTFIAIDR 259 (342)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHH
Confidence 69999999998764
No 7
>2r4g_A Telomerase reverse transcriptase; telomeres, chromosomal protein, DNA-binding, nucleotidyltransferase, nucleus; 1.71A {Tetrahymena thermophila}
Probab=7.95 E-value=3.5e+02 Score=20.61 Aligned_cols=45 Identities=9% Similarity=0.154 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCccCCCCCCCccCcchHHHHHHHH
Q psy2033 45 QASLGWLLLMGVLYIIGGLIYALRVPERYFPGKCDIWFQSHQIFHVLVV 93 (124)
Q Consensus 45 ~~~l~~li~~g~~Y~iGa~fY~~r~PEr~~PG~fD~~g~sHqiwHifvv 93 (124)
...+.|++-..+.-.+...||++..- ..+..+....|.+|.-++-
T Consensus 205 ~~fi~WLf~~lVipLIRs~FYVTEs~----~~~~~lfyfRk~vW~~L~~ 249 (267)
T 2r4g_A 205 GDLIVFIINKIVIPVLRYNFYITEKH----KEGSQIFYYRKPIWKLVSK 249 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHEEEEESS----STTSCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhheeeEeccC----CCcceEEEECHHHHHHHHH
Confidence 34667788888899999999999873 2456778889999988876
No 8
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=7.74 E-value=1.5e+02 Score=22.40 Aligned_cols=15 Identities=20% Similarity=0.129 Sum_probs=12.2
Q ss_pred CCCchhhHHHHHHHH
Q psy2033 10 HLGAGQTEQQPPESL 24 (124)
Q Consensus 10 ~~~~~Rt~~f~~lgl 24 (124)
.-|.+||+.|+++-.
T Consensus 226 saGvGRTGtfiai~~ 240 (291)
T 2hc1_A 226 SAGVGRTGTFIALDR 240 (291)
T ss_dssp SSSSHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHH
Confidence 368999999998754
No 9
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=7.68 E-value=1.8e+02 Score=21.68 Aligned_cols=14 Identities=21% Similarity=0.209 Sum_probs=11.9
Q ss_pred CCchhhHHHHHHHH
Q psy2033 11 LGAGQTEQQPPESL 24 (124)
Q Consensus 11 ~~~~Rt~~f~~lgl 24 (124)
-|.+||++|+++-.
T Consensus 215 aGvGRTGtfiaid~ 228 (288)
T 4grz_A 215 AGIGRTGTIIVIDM 228 (288)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 68999999998765
No 10
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=7.59 E-value=1.5e+02 Score=22.42 Aligned_cols=14 Identities=21% Similarity=0.133 Sum_probs=11.9
Q ss_pred CCchhhHHHHHHHH
Q psy2033 11 LGAGQTEQQPPESL 24 (124)
Q Consensus 11 ~~~~Rt~~f~~lgl 24 (124)
-|.+||+.|+++-.
T Consensus 228 aGvGRTGtfiai~~ 241 (302)
T 4az1_A 228 AGIGRTGTLIGAYA 241 (302)
T ss_dssp SSSSHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 69999999998654
Done!