BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2035
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R0G6|COMP_MOUSE Cartilage oligomeric matrix protein OS=Mus musculus GN=Comp PE=1
SV=2
Length = 755
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNC V N Q D DRDG GD CDPD DGDG+ N++DNC L+ NP+Q +SD+
Sbjct: 288 DNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDS 339
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q DNDRDG GD C D D D + + D C
Sbjct: 480 DNCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVC 518
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N Q D+D DGKGD CD D D DG+ + DNCRL+ NP Q+D+D
Sbjct: 444 DNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRDNCRLVPNPGQEDND 494
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDE--DNCRLIYNPNQDDSD 52
DNCP+ NP+Q D D D GD CD D D DG + + DNC + N Q DSD
Sbjct: 406 DNCPQKDNPDQRDVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSD 458
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 23/80 (28%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DECD-------PDLDGDGISNDED 38
DNC N +Q D D DG+G D C D DGDG+ + D
Sbjct: 347 DNCRSKKNDDQKDTDLDGRGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACD 406
Query: 39 NCRLIYNPNQDDSDAHYNAD 58
NC NP+Q D D + D
Sbjct: 407 NCPQKDNPDQRDVDHDFVGD 426
>sp|P49747|COMP_HUMAN Cartilage oligomeric matrix protein OS=Homo sapiens GN=COMP PE=1
SV=2
Length = 757
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC V N Q D DRDG GD CDPD DGDG+ N++DNC L+ NP+Q ++D
Sbjct: 290 DNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCPLVRNPDQRNTD 340
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D DRDG GD C D D D + + D C
Sbjct: 482 DNCRLVPNPGQEDADRDGVGDVCQDDFDADKVVDKIDVC 520
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDE--DNCRLIYNPNQDDSD 52
DNCP+ +NP+Q D D D GD CD D D DG + + DNC + N Q+DSD
Sbjct: 408 DNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQEDSD 460
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N Q D+D DG+GD CD D D DG+ + DNCRL+ NP Q+D+D
Sbjct: 446 DNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDAD 496
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 23/80 (28%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DEC-------DPDLDGDGISNDED 38
DNC N +Q D D+DG+G D C D DGDGI + D
Sbjct: 349 DNCRSQKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNCPRVPNSDQKDSDGDGIGDACD 408
Query: 39 NCRLIYNPNQDDSDAHYNAD 58
NC NP+Q D D + D
Sbjct: 409 NCPQKSNPDQADVDHDFVGD 428
>sp|Q1L8P7|TSP3B_DANRE Thrombospondin-3b OS=Danio rerio GN=thbs3b PE=3 SV=1
Length = 929
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 35/52 (67%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNCP V N +QLD D +GKGD CD D+DGDGI N DNC I NP Q D D
Sbjct: 514 DNCPNVPNGDQLDTDGNGKGDICDTDIDGDGIPNVLDNCPKIPNPMQTDRDG 565
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC N Q D D DG GD+CD D DGDGI N EDNCRL+ N +Q +SD
Sbjct: 455 DNCANTPNSGQEDTDGDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSD 505
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 25/77 (32%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECD-------------------------PDLDGDGISN 35
+DNCPK+ NP Q D D DG GD CD D+DGDG +
Sbjct: 549 LDNCPKIPNPMQTDRDGDGVGDACDSCPEVNDPLQSDMDNDLVGDVCDTNKDIDGDGYQD 608
Query: 36 DEDNCRLIYNPNQDDSD 52
DNC + N +Q DSD
Sbjct: 609 TRDNCPEVPNSSQLDSD 625
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q+D D +G GD C+ D D D +++ D C
Sbjct: 651 DNCRLVPNPSQIDTDANGVGDVCETDFDNDKVTDLLDAC 689
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 2 DNCPKVANPNQLDNDR----DGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNA 57
DNCP+V N +QLD+D D D+ D D D + DNCRL+ NP+Q D+DA+
Sbjct: 611 DNCPEVPNSSQLDSDNDGIGDECDDDDDNDGIPDILPPGPDNCRLVPNPSQIDTDANGVG 670
Query: 58 DL 59
D+
Sbjct: 671 DV 672
>sp|P35448|TSP1_XENLA Thrombospondin-1 OS=Xenopus laevis GN=thbs1 PE=2 SV=1
Length = 1173
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+Q D DR+G+GD C D+DGDGI N+ DNC +YN +Q D+D
Sbjct: 778 DNCPYNHNPDQADTDRNGEGDACSVDIDGDGILNERDNCAYVYNVDQKDTD 828
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
+DNCP + N NQ D+D+DGKGD CD D D DG+ +D+DNCRL+ NP+Q D++ D
Sbjct: 874 LDNCPYIPNANQADHDKDGKGDACDHDDDNDGVPDDKDNCRLVPNPDQTDTNGDGRGD 931
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP Q D+D D GD+CD D+D DG N+ DNC I N NQ D D
Sbjct: 837 DNCPLEHNPEQTDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHD 889
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q D + DG+GD C D D D I + ED C
Sbjct: 911 DNCRLVPNPDQTDTNGDGRGDACQYDFDDDSIPDAEDVC 949
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + N Q D D+DG GD CD D D DGI +D DNC+ +YNP Q D D
Sbjct: 719 DNCPNLPNSGQEDYDKDGMGDACDKDDDNDGILDDRDNCQFVYNPAQYDYD 769
>sp|Q8JGW0|TSP4B_DANRE Thrombospondin-4-B OS=Danio rerio GN=thbs4b PE=2 SV=1
Length = 949
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 37/57 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D D DGKGD CDPD DGDGI N++DNC L N NQ +SD + D
Sbjct: 474 DNCVTVPNSGQEDADGDGKGDACDPDADGDGILNEQDNCWLTPNINQQNSDKDSHGD 530
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP + NPNQ D D D GD CD D DGDG + +DNC ++ N +Q D+D
Sbjct: 592 DSCPDIPNPNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPMVINSSQLDTD 644
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q+D++ DG GD C+ D D D + + DNC
Sbjct: 670 DNCRLVPNPEQIDDNNDGVGDICESDFDQDKVIDRIDNC 708
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 23/74 (31%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DECDP-------DLDGDGISNDED 38
DNC +V NP+Q D D DG G D C D DGDG+ + D
Sbjct: 533 DNCVRVDNPDQRDTDSDGLGDACDDDMDGDGLKNFLDNCQRVKNRDQLDRDGDGVGDACD 592
Query: 39 NCRLIYNPNQDDSD 52
+C I NPNQ D D
Sbjct: 593 SCPDIPNPNQSDID 606
>sp|P35440|TSP2_CHICK Thrombospondin-2 OS=Gallus gallus GN=THBS2 PE=2 SV=1
Length = 1178
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNCP V NP Q+D D +G+GD C D+DGD I N+ DNC +YN +Q D+D
Sbjct: 783 DNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDG 834
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNADL 59
DNCP + N NQ D+D+DGKGD CDPD D DGI +D DNCRL YNP Q+DSD D+
Sbjct: 880 DNCPYIPNANQADHDKDGKGDACDPDDDNDGIPDDRDNCRLRYNPEQEDSDGDGRGDI 937
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + NP+Q D D D GD+CD D+D DG N++DNC I N NQ D D
Sbjct: 842 DNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHD 894
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + N Q D D+DGKGD CD D D DG+ +D+DNC L++NP Q D D
Sbjct: 724 DNCPLLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYD 774
>sp|P35442|TSP2_HUMAN Thrombospondin-2 OS=Homo sapiens GN=THBS2 PE=1 SV=2
Length = 1172
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNCP V NP Q+D D +G+GD C D+DGD + N+ DNC +YN +Q D+D
Sbjct: 777 DNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDG 828
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V NP+Q D D D GD+CD D+D DG N++DNC I N NQ D D
Sbjct: 836 DNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHD 888
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNADL 59
DNCP ++N NQ D+DRDG+GD CDPD D DG+ +D DNCRL++NP+Q+D D D+
Sbjct: 874 DNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCRLVFNPDQEDLDGDGRGDI 931
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + N Q D D+DG GD CD D D DG+++++DNC+L++NP Q D D
Sbjct: 718 DNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYD 768
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDL 28
DNC V NP+Q D D DG+GD C D
Sbjct: 910 DNCRLVFNPDQEDLDGDGRGDICKDDF 936
>sp|P35444|COMP_RAT Cartilage oligomeric matrix protein OS=Rattus norvegicus GN=Comp
PE=1 SV=1
Length = 755
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC V N Q D DRD GD CDPD DGDG+ N++DNC L+ NP+Q +SD
Sbjct: 288 DNCVTVPNSGQEDVDRDRIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSD 338
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q DNDRDG GD C D D D + + D C
Sbjct: 480 DNCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVC 518
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N Q D+D DGKGD CD D D DG+ + DNCRL+ NP Q+D+D
Sbjct: 444 DNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRDNCRLVPNPGQEDND 494
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDE--DNCRLIYNPNQDDSD 52
DNCP+ NP+Q D D D GD CD D D DG + + DNC + N Q DSD
Sbjct: 406 DNCPQKDNPDQRDVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSD 458
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 23/80 (28%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DEC-------DPDLDGDGISNDED 38
DNC N +Q D DRDG+G D C D DGDG+ + D
Sbjct: 347 DNCRSQKNDDQKDTDRDGQGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACD 406
Query: 39 NCRLIYNPNQDDSDAHYNAD 58
NC NP+Q D D + D
Sbjct: 407 NCPQKDNPDQRDVDHDFVGD 426
>sp|Q95116|TSP2_BOVIN Thrombospondin-2 OS=Bos taurus GN=THBS2 PE=2 SV=2
Length = 1170
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNCP V NP Q+D D +G+GD C D+DGD + N+ DNC +YN +Q D+D
Sbjct: 775 DNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDG 826
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V NP+Q D D D GD+CD D+D DG N++DNC I N NQ D D
Sbjct: 834 DNCPLVHNPDQTDVDNDLVGDQCDNNEDIDEDGHQNNQDNCPHIPNANQADHD 886
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNCP + N NQ D+DRDG+GD CD D D DGI +D DNCRL+ NP+Q+DSD D
Sbjct: 872 DNCPHIPNANQADHDRDGQGDACDSDDDNDGIPDDRDNCRLVANPDQEDSDGDRRGD 928
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC VANP+Q D+D D +GD C D D D I + +D C
Sbjct: 908 DNCRLVANPDQEDSDGDRRGDACKDDFDNDSIPDIDDVC 946
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + N Q D D+DG GD CD D D DG+S+++DNC+L++NP Q D D
Sbjct: 716 DNCPLLPNSGQEDFDKDGIGDACDDDDDNDGVSDEKDNCQLLFNPRQFDYD 766
>sp|P35441|TSP1_MOUSE Thrombospondin-1 OS=Mus musculus GN=Thbs1 PE=1 SV=1
Length = 1170
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+Q D D++G+GD C D+DGDGI N+ DNC+ +YN +Q D+D
Sbjct: 775 DNCPYNHNPDQADTDKNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTD 825
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
+DNCP V N NQ D+D+DGKGD CD D D DGI +D DNCRL+ NP+Q DSD D
Sbjct: 871 LDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDRDNCRLVPNPDQKDSDGDGRGD 928
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+QLD+D D GD CD D+D DG N+ DNC + N NQ D D
Sbjct: 834 DNCPLEHNPDQLDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHD 886
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q D+D DG+GD C D D D + + +D C
Sbjct: 908 DNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDIC 946
>sp|Q03350|TSP2_MOUSE Thrombospondin-2 OS=Mus musculus GN=Thbs2 PE=1 SV=2
Length = 1172
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNCP V NP Q+D D +G+GD C D+DGD + N+ DNC +YN +Q D+D
Sbjct: 777 DNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDG 828
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP + NP+Q+D D D GD+CD D+D DG N++DNC I N NQ D D
Sbjct: 836 DNCPLMHNPDQIDQDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNSNQADHD 888
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNADL 59
DNCP ++N NQ D+D DGKGD CD D D DG+ +D DNCRL++NP+Q+DSD D+
Sbjct: 874 DNCPYISNSNQADHDNDGKGDACDSDDDNDGVPDDRDNCRLVFNPDQEDSDGDGRGDI 931
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCPK+ N Q D D+DG GD CD D D DG+S+++DNC+L++NP Q D D
Sbjct: 718 DNCPKLPNSGQEDFDKDGIGDACDEDDDNDGVSDEKDNCQLLFNPRQLDYD 768
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q D+D DG+GD C D D D + + +D C
Sbjct: 910 DNCRLVFNPDQEDSDGDGRGDICKDDFDNDNVPDIDDVC 948
>sp|P35445|COMP_BOVIN Cartilage oligomeric matrix protein OS=Bos taurus GN=COMP PE=1 SV=2
Length = 756
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNC V N Q D D+DG GD CDPD DGDG+ N++DNC L+ NP+Q ++D
Sbjct: 289 DNCVTVPNSGQEDVDQDGIGDACDPDADGDGVLNEKDNCPLVRNPDQRNTDG 340
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D DRDG GD C D D D + + D C
Sbjct: 481 DNCRLVPNPGQEDMDRDGVGDACQGDFDADKVVDKIDVC 519
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N Q D+D DG+GD CD D D DG+ + DNCRL+ NP Q+D D
Sbjct: 445 DNCPTVPNSAQQDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDMD 495
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISN--DEDNCRLIYNPNQDDSD 52
DNCP+ +N +Q D D D GD CD D D DG + +DNC + N Q DSD
Sbjct: 407 DNCPQKSNADQRDVDHDFVGDACDSDQDQDGDGHQDSKDNCPTVPNSAQQDSD 459
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNC N +Q D D+DG+GD CD D+DGD I N DNC + N +Q D+D
Sbjct: 348 DNCRSQKNDDQKDTDKDGRGDACDDDIDGDRIRNPVDNCPKVPNSDQKDTDG 399
>sp|P07996|TSP1_HUMAN Thrombospondin-1 OS=Homo sapiens GN=THBS1 PE=1 SV=2
Length = 1170
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+Q D D +G+GD C D+DGDGI N+ DNC+ +YN +Q D+D
Sbjct: 775 DNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTD 825
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
+DNCP V N NQ D+D+DGKGD CD D D DGI +D+DNCRL+ NP+Q DSD D
Sbjct: 871 LDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGD 928
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+QLD+D D GD CD D+D DG N+ DNC + N NQ D D
Sbjct: 834 DNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHD 886
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q D+D DG+GD C D D D + + +D C
Sbjct: 908 DNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDIC 946
>sp|P35443|TSP4_HUMAN Thrombospondin-4 OS=Homo sapiens GN=THBS4 PE=1 SV=2
Length = 961
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D DRDG GD CD D DGDGI N++DNC LI+N +Q +SD D
Sbjct: 485 DNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQDNCVLIHNVDQRNSDKDIFGD 541
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP V+NPNQ D D D GD CD D DGDG + DNC + N Q D+D
Sbjct: 603 DSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTD 655
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D++ DG GD C+ D D D + + D C
Sbjct: 681 DNCRLVPNPAQEDSNSDGVGDICESDFDQDQVIDRIDVC 719
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSDAHYNA 57
DNCP V N QLD D+DG GDECD D D DG + DNCRL+ NP Q+DS++
Sbjct: 641 DNCPTVINSAQLDTDKDGIGDECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSNSDGVG 700
Query: 58 DL 59
D+
Sbjct: 701 DI 702
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 23/74 (31%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DECDP-------DLDGDGISNDED 38
DNC V N +Q D D DG+G D C D DGDG+ + D
Sbjct: 544 DNCLSVLNNDQKDTDGDGRGDACDDDMDGDGIKNILDNCPKFPNRDQRDKDGDGVGDACD 603
Query: 39 NCRLIYNPNQDDSD 52
+C + NPNQ D D
Sbjct: 604 SCPDVSNPNQSDVD 617
>sp|Q28178|TSP1_BOVIN Thrombospondin-1 OS=Bos taurus GN=THBS1 PE=2 SV=2
Length = 1170
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+Q D D +G+GD C D+DGD I N+ DNC+ +YN +Q D+D
Sbjct: 775 DNCPYNHNPDQADTDNNGEGDACAADIDGDSILNERDNCQYVYNVDQKDTD 825
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
+DNCP V N NQ D+D+DGKGD CD D D DGI +D DNCRL+ NP+Q DSD D
Sbjct: 871 LDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDRDNCRLVPNPDQKDSDGDGRGD 928
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECD--PDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP NP+QLD+D D GD CD D+D DG N+ DNC + N NQ D D
Sbjct: 834 DNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHD 886
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP+Q D+D DG+GD C D D D + + +D C
Sbjct: 908 DNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDIC 946
>sp|Q8JHW2|TSP3A_DANRE Thrombospondin-3a OS=Danio rerio GN=thbs3a PE=2 SV=2
Length = 962
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC N Q D D DG GD+CD D DGDGI N EDNCRL+ N +Q +SD
Sbjct: 483 DNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVSNKDQQNSD 533
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 25/77 (32%)
Query: 1 MDNCPKVANPNQLDNDRDGKGDECDP-------------------------DLDGDGISN 35
+DNCPKV NP Q D DRDG GD CD D DGDG +
Sbjct: 577 LDNCPKVPNPMQTDRDRDGVGDACDSCPEISNPMQTDVDNDLVGDVCDTNQDTDGDGHQD 636
Query: 36 DEDNCRLIYNPNQDDSD 52
DNC I N +Q DSD
Sbjct: 637 TRDNCPDIPNSSQLDSD 653
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N +Q D D +G+GD CD D+DGDGI N DNC + NP Q D D
Sbjct: 542 DNCPTVPNIDQKDTDSNGEGDACDDDIDGDGIQNVLDNCPKVPNPMQTDRD 592
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC ++NPNQ D+D +G GD C+ D D D + + D C
Sbjct: 682 DNCRLISNPNQKDSDSNGVGDVCENDFDNDSVMDLVDVC 720
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 7/65 (10%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDE-------DNCRLIYNPNQDDSDAH 54
DNCP + N +QLD+D DG GD+CD D D DGI ++ DNCRLI NPNQ DSD++
Sbjct: 639 DNCPDIPNSSQLDSDNDGIGDDCDEDDDNDGIPDNHAINGIGPDNCRLISNPNQKDSDSN 698
Query: 55 YNADL 59
D+
Sbjct: 699 GVGDV 703
>sp|Q9Z1T2|TSP4_MOUSE Thrombospondin-4 OS=Mus musculus GN=Thbs4 PE=1 SV=1
Length = 963
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 36/57 (63%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D DRDG GD CD D DGDGI N++DNC L +N +Q +SD D
Sbjct: 487 DNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQDNCVLTHNIDQRNSDKDIFGD 543
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP V+NPNQ D D D GD CD D DGDG + DNC + N +Q D+D
Sbjct: 605 DSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTD 657
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D++ DG GD C+ D D D + + D C
Sbjct: 683 DNCRLVPNPAQEDSNNDGVGDICEADFDQDQVIDHIDVC 721
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSD 52
DNCP V N +QLD D+DG GDECD D D DG + DNCRL+ NP Q+DS+
Sbjct: 643 DNCPTVINSSQLDTDKDGIGDECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSN 697
>sp|P49746|TSP3_HUMAN Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=2 SV=1
Length = 956
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N +Q D D +G+GD CD D+DGDGI N DNC + NP Q D D
Sbjct: 540 DNCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRD 590
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP+++NP Q D D D GD CD D DGDG + +DNC + N +Q DSD
Sbjct: 599 DSCPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCPQLPNSSQLDSD 651
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NPNQ D+D +G GD C+ D D D + + D C
Sbjct: 677 DNCRLVPNPNQKDSDGNGVGDVCEDDFDNDAVVDPLDVC 715
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSDAHYNA 57
DNCP++ N +QLD+D DG GDECD D D DG + DNCRL+ NPNQ DSD +
Sbjct: 637 DNCPQLPNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVG 696
Query: 58 DL 59
D+
Sbjct: 697 DV 698
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 33/51 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC N Q D D DG GD+CD D DGDGI N EDNCRL N +Q +SD
Sbjct: 481 DNCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPNKDQQNSD 531
>sp|P49744|TSP4_RAT Thrombospondin-4 OS=Rattus norvegicus GN=Thbs4 PE=2 SV=1
Length = 980
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D DRDG GD CD D DGDGI N++DNC L +N +Q ++D D
Sbjct: 504 DNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQDNCVLTHNVDQRNTDKDIFGD 560
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP V+NPNQ D D D GD CD D DGDG + DNC + N Q D+D
Sbjct: 622 DSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTD 674
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D++ DG GD C+ D D D + + D C
Sbjct: 700 DNCRLVPNPAQEDSNNDGVGDICEADFDQDKVIDRIDVC 738
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 23/74 (31%)
Query: 2 DNCPKVANPNQLDNDRDGKG----------------DEC-------DPDLDGDGISNDED 38
DNC V N +Q D D DGKG D C D DGDG+ + D
Sbjct: 563 DNCRGVLNNDQKDTDGDGKGDACDDDMDGDGIKNILDNCPRVPNRDQQDRDGDGVGDACD 622
Query: 39 NCRLIYNPNQDDSD 52
+C + NPNQ D D
Sbjct: 623 SCPDVSNPNQSDVD 636
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSD 52
DNCP V N QLD D+DG GDECD D D DG DNCRL+ NP Q+DS+
Sbjct: 660 DNCPTVINSAQLDTDKDGIGDECDDDDDNDGMPDLFPPGPDNCRLVPNPAQEDSN 714
>sp|Q05895|TSP3_MOUSE Thrombospondin-3 OS=Mus musculus GN=Thbs3 PE=1 SV=2
Length = 956
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNCP V N +Q D D +G+GD CD D+DGDGI N DNC + NP Q D D
Sbjct: 540 DNCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRD 590
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP+++NP Q D D D GD CD D DGDG + +DNC + N +Q DSD
Sbjct: 599 DSCPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCPQLPNSSQLDSD 651
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NPNQ D+D +G GD C+ D D D + + D C
Sbjct: 677 DNCRLVPNPNQKDSDGNGVGDVCEDDFDNDAVVDPLDVC 715
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSDAHYNA 57
DNCP++ N +QLD+D DG GDECD D D DG I DNCRL+ NPNQ DSD +
Sbjct: 637 DNCPQLPNSSQLDSDNDGLGDECDGDDDNDGVPDYIPPGPDNCRLVPNPNQKDSDGNGVG 696
Query: 58 DL 59
D+
Sbjct: 697 DV 698
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 33/51 (64%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSD 52
DNC N Q D D DG GD+CD D DGDGI N EDNCRL N +Q +SD
Sbjct: 481 DNCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPNKDQQNSD 531
>sp|Q06441|TSP4_XENLA Thrombospondin-4 OS=Xenopus laevis GN=thbs4 PE=2 SV=1
Length = 955
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 34/57 (59%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D D+D GD CD D DGDGI N++DNC L N +Q +SD D
Sbjct: 482 DNCVYVPNSGQEDTDKDNIGDACDEDADGDGILNEQDNCVLAANIDQKNSDQDIFGD 538
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP + NPNQ D D D GD CD D DGDG + DNC + N NQ D+D
Sbjct: 600 DSCPDIINPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSNQLDTD 652
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D++ DG GD C+ D D D + + D C
Sbjct: 678 DNCKLVPNPGQEDDNNDGVGDVCEADFDQDTVIDRIDVC 716
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDD------- 50
DNCP V N NQLD D+DG GDECD D D DG + DNC+L+ NP Q+D
Sbjct: 638 DNCPTVINSNQLDTDKDGIGDECDDDDDNDGIPDTVPPGPDNCKLVPNPGQEDDNNDGVG 697
Query: 51 --SDAHYNADLILMR-QVMAWAMYVTKISTKMELRTYQMCVL 89
+A ++ D ++ R V + T + R YQ VL
Sbjct: 698 DVCEADFDQDTVIDRIDVCPENAEI----TLTDFRAYQTVVL 735
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNADL 59
DNC N +Q D D DGKGD CD D+DGDGI N DNC+ + N +Q D D D+
Sbjct: 541 DNCRLTLNNDQRDTDNDGKGDACDDDMDGDGIKNILDNCQRVPNVDQKDKDGDGVGDI 598
>sp|Q3SWW8|TSP4_BOVIN Thrombospondin-4 OS=Bos taurus GN=THBS4 PE=2 SV=1
Length = 961
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDP--DLDGDGISNDEDNCRLIYNPNQDDSD 52
D+CP+V+NPNQ D D D GD CD D DGDG + DNC + N Q D+D
Sbjct: 603 DSCPEVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTD 655
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNC 40
DNC V NP Q D++ DG GD C+ D D D + + D C
Sbjct: 681 DNCRLVPNPAQEDSNSDGVGDICEADFDQDQVIDRIDVC 719
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 36/57 (63%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDAHYNAD 58
DNC V N Q D DRDG GD CD D DGDGI N++DNC L +N +Q +SD D
Sbjct: 485 DNCKYVPNSGQEDADRDGIGDACDDDADGDGILNEQDNCVLTHNVDQRNSDKDIFGD 541
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDG----ISNDEDNCRLIYNPNQDDSDAHYNA 57
DNCP V N QLD D+DG GDECD D D DG + DNCRL+ NP Q+DS++
Sbjct: 641 DNCPTVINSAQLDTDKDGIGDECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSNSDGVG 700
Query: 58 DL 59
D+
Sbjct: 701 DI 702
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 2 DNCPKVANPNQLDNDRDGKGDECDPDLDGDGISNDEDNCRLIYNPNQDDSDA 53
DNC V N +Q D D DGKGD CD D+DGDGI N DNC+ + N +Q+D D
Sbjct: 544 DNCRNVLNNDQKDTDGDGKGDACDDDMDGDGIKNILDNCQKVPNSDQEDRDG 595
>sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1
Length = 367
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 87 CVLTILSSTELTSGFMAGFSHSYWTQAQRNKKDTCQTEE 125
C + +++S L + G+ + QAQRN + C EE
Sbjct: 4 CTILVVASLLLVDSLLPGYGQNKSVQAQRNLNELCYNEE 42
>sp|Q9UMF0|ICAM5_HUMAN Intercellular adhesion molecule 5 OS=Homo sapiens GN=ICAM5 PE=1
SV=3
Length = 924
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 5 PKVANPNQLDNDRDGKGDECDPDLDGDG---ISNDEDNCRLIYNPNQDDSD 52
P N +ND D + CD LD DG I N R++Y P DDSD
Sbjct: 365 PAQLQLNATEND-DRRSFFCDATLDVDGETLIKNRSAELRVLYAPRLDDSD 414
>sp|Q9KM67|SBCC_VIBCH Nuclease SbcCD subunit C OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=sbcC PE=3 SV=1
Length = 1013
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 49 DDSDAHYNADLILMRQVMAWAMYVTKISTKMELRTYQMCVLTILSSTELTSGFMAGFSHS 108
D++ AHY A L L +Q + V +I+T E T+ + + + A H
Sbjct: 251 DETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQKAARLTA--VHQ 308
Query: 109 YWTQAQRNKKDTCQTEESSQ 128
W QAQ+N + E Q
Sbjct: 309 QWHQAQKNLQQAKLKVEQQQ 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,703,678
Number of Sequences: 539616
Number of extensions: 2082971
Number of successful extensions: 5054
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4633
Number of HSP's gapped (non-prelim): 338
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)