RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2038
(155 letters)
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 171 bits (436), Expect = 2e-54
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 20 YSALESILLT-LIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN 78
S E++ +P KS+ GEI+L+TG G+GIGR A + KS + WDI++ G
Sbjct: 10 SSGRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE 69
Query: 79 ETKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQK 138
ET + G + HT+ +D SNRE++ A KV+ E+G+V+ILVNNAG++ L +
Sbjct: 70 ETAAKCKGLGAKV-HTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQ 128
Query: 139 PDVIRKTFDVNVLAHFW 155
I KTF+VNVLAHFW
Sbjct: 129 DPQIEKTFEVNVLAHFW 145
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 105 bits (264), Expect = 2e-28
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+G ++TG +GIG A ++ + + D+D+ + QG H
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA-HGV 85
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV + +E++R+AD+ + +G V ++ +NAGI+ PL + D R D+++
Sbjct: 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 145
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 104 bits (262), Expect = 4e-28
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGT-RTFHT 94
K G +TG NG+G L ++L Q DI + ++ E +G+
Sbjct: 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
+LDV++RE AD+V G V+IL NNAG+ +P+ E D VN+
Sbjct: 64 VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNL 119
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 94.6 bits (236), Expect = 2e-24
Identities = 24/120 (20%), Positives = 51/120 (42%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ L+G+ +++TG GIGRE+A L + + + ++ + E G + H
Sbjct: 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+ + + + K +G + +L+ N L +RK+ +VN L++
Sbjct: 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 143
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 89.9 bits (224), Expect = 7e-23
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 44 LLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNRE 103
L+TG G GIG+ +A RL + D ++ + G K+DVS+R+
Sbjct: 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRD 64
Query: 104 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+V ++ RK +G ++VNNAG+ P P+ P+++ K +++NV W
Sbjct: 65 QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 89.9 bits (224), Expect = 7e-23
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
K G++ L+TG G IG A RL ++ + D++ + + + E+G +Y
Sbjct: 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA-RSY 61
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 150
DV++ E V+ D V ++ G++ L NNAG P+ + D + +NV
Sbjct: 62 VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 89.1 bits (222), Expect = 2e-22
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L G+ L+TG GIG+++A + + G +
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-GKALPIR 87
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV+ ++V + D++ E+G + I V NAGI+ + + + + ++ D NV F
Sbjct: 88 CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFL 146
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 88.8 bits (221), Expect = 2e-22
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L G ++TG GIG +A+ L + + D+D E G +
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FAVE 64
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+DV+ R V K +G +L NAG+ +P + + FDVN F
Sbjct: 65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 88.0 bits (219), Expect = 4e-22
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L ++++++G+G +G LA+R +Q + + + + + + G R +
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA-LSVGT 67
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFW 155
D+++ +V + D+ K G V +++NNA +P KP + +R ++ V
Sbjct: 68 DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 87.6 bits (218), Expect = 5e-22
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFH 93
S +SL+ +++++TG G+GIGR +AK+ S+ + ++ E N+ Q G
Sbjct: 1 SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVL- 59
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 150
K DVS +++V + + + +L NNAGIM P+ E ++ + VN+
Sbjct: 60 GVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 87.6 bits (218), Expect = 6e-22
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL+G++ +TG GIG +A+ Q + W + + + + + G + YK
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHS-KAYK 89
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKP--LNEQKPDVIRKTFDVNVLAHF 154
++S+ + V + K+ G + + V NAG+ + ++ D K V++ +
Sbjct: 90 CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 155 W 155
+
Sbjct: 150 Y 150
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 87.2 bits (217), Expect = 7e-22
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+G+ ++TG G GIG+E+A + + DI+ N ++ G + +
Sbjct: 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA-FACR 66
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+++ +E+ +AD ++G+V ILVNNAG KP + R+ +++NV + F
Sbjct: 67 CDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFH 124
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 86.8 bits (216), Expect = 9e-22
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
K LEG+ L+TG GIGR A+ ++ + DID + + E G +
Sbjct: 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA---AEIGPAAY-AV 59
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
++DV+ ++ + + G + ILVNNA + P+ E + K F +NV +
Sbjct: 60 QMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLF 119
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 86.4 bits (215), Expect = 1e-21
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+ + ++TG IG L + + + D+DE + + +G +
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVS-SVV 68
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+DV+N E V V ++ G V ILV AGI + + K D+N+ F
Sbjct: 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 86.0 bits (214), Expect = 2e-21
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L G+ L+TG G+G A+ L + + DI E+ +G H
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-YDAHGVA 64
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
DV++ + K+ E V IL+NNAGI KP+ E + + +K D N+ + F
Sbjct: 65 FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAF 122
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 84.2 bits (209), Expect = 7e-21
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN---------ETKQMPEEQG 88
+ I++TG G+G+GR L L ++ G+ +Q G
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVER------------GHQVSMMGRRYQRLQQQELLLG 48
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDV 148
D+++ E+V + G ++++ AG P+ + IR+ +
Sbjct: 49 NAV-IGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMES 107
Query: 149 NVLAHFW 155
N+++
Sbjct: 108 NLVSTIL 114
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 84.5 bits (210), Expect = 8e-21
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L+G++ ++TG GIG +A + ++ + M + + F ++
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQF--FQH 61
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D S+ + ++ D K G V+ LVNNAGI K + E RK VN+ F+
Sbjct: 62 DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 84.5 bits (210), Expect = 8e-21
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 40 GEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI--DEKGNNETKQMPEEQGTRTFHTYKL 97
++ ++TG GIGR ++++L D+ E+ ET ++ E + L
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAV-FVGL 60
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV+++ D+ +++G +LVNNAGI KPL E + +++ + VNV + F+
Sbjct: 61 DVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 84.1 bits (209), Expect = 1e-20
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 2/125 (1%)
Query: 28 LTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQ 87
+T ++L+TG G+G+GR A RL + + D+ +G +K E
Sbjct: 1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 60
Query: 88 GTR-TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKT 145
T DVS+ +V + G + NNAGI P K
Sbjct: 61 APDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 120
Query: 146 FDVNV 150
+N+
Sbjct: 121 VSINL 125
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 84.2 bits (209), Expect = 1e-20
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 27/131 (20%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ--------------KSLWMCWDIDEKGNNETK 81
+ + L+TG GIG +A+ L QQ + L
Sbjct: 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEEL-------------AA 74
Query: 82 QMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDV 141
+ T Y+ D+SN E++L + +R + V I +NNAG+ L
Sbjct: 75 ECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSG 134
Query: 142 IRKTFDVNVLA 152
+ F+VNVLA
Sbjct: 135 WKDMFNVNVLA 145
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 83.8 bits (208), Expect = 2e-20
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTR--TFHT 94
S + L+TG G+GIG+ +A L + M + Q E G
Sbjct: 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAH 153
D++N +E R D V G + +V+ AG P+ + + R+T D+NV
Sbjct: 68 EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGT 127
Query: 154 FW 155
+
Sbjct: 128 MY 129
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 83.7 bits (208), Expect = 2e-20
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+G+ L+TG GIG ++A+ + + D + ++ EQ HT
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+D++ + +A + + G + +LVNNAGI +P+ + P + T VN+ A
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 83.8 bits (208), Expect = 2e-20
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L + ++TG G+GIGR A+ + + + D++E E G++ F ++
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA---NEIGSKAF-GVRV 80
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DVS+ ++ + +K + G V +LVNNAG + + + VNV
Sbjct: 81 DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNV 133
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 82.9 bits (206), Expect = 2e-20
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG--TR 90
P + L IIL+TG +GIGRE A + + + +E+ + E+
Sbjct: 5 PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVN 149
+ L E ++A ++ + +++NAG++ P++EQ P V + VN
Sbjct: 65 QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVN 124
Query: 150 VLAHF 154
V A F
Sbjct: 125 VNATF 129
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 82.6 bits (205), Expect = 3e-20
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTR-- 90
+ L+G +IL+TG GIG A+ + + E E + G
Sbjct: 7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQP 66
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVN 149
L+ + ++ +A +V E G + L++NA I+ P PL + + + VN
Sbjct: 67 LIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVN 126
Query: 150 VLAHFW 155
V A F
Sbjct: 127 VNATFM 132
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 82.7 bits (205), Expect = 3e-20
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 2/119 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ + + G G+ IG E+AK+ + + + E G R
Sbjct: 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRI-VARS 62
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
LD N +EV + + + + N G P+ E V RK +++ A F
Sbjct: 63 LDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFV 120
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 82.2 bits (204), Expect = 3e-20
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 39 EGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGTRTF 92
E ++ ++TG GIG +A+ L + + + ++ ++ +EQG
Sbjct: 1 EMKVAVITGASRGIGEAIARALARDG-----YALALGARSVDRLEKIAHELMQEQGVEV- 54
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
+ LDVS E V + KV + G+V ++V NAG+ K L E + + +VN+L
Sbjct: 55 FYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLL 113
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 82.9 bits (206), Expect = 3e-20
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDID-EKGNNETKQMPEEQGTRTFHTY 95
L G + L+TG G+G +A+ L + + + E+ + +++ E+ G +
Sbjct: 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAF 76
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+ DVSN EEV ++ + V+++ G++ +VN AGI P E D R+ +VN+ ++
Sbjct: 77 RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 136
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 82.6 bits (205), Expect = 4e-20
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDID-EKGNNETKQMPEEQGTRTFHTY 95
S + I++TG GIG + + + T+++ +E G +T Y
Sbjct: 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKT-KAY 69
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+ DVSN + V + ++ ++G ++ L+ NAG+ KP E + +DVNV F
Sbjct: 70 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 129
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 82.5 bits (205), Expect = 4e-20
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ L+ ++ ++TG NGIGR +A+R + + D+ E + G R T
Sbjct: 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRV-LTV 59
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
K DVS +V +V G ILVNNAGI P P +E + +KTF++NV
Sbjct: 60 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV 114
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 82.5 bits (205), Expect = 4e-20
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
K LE ++ L+T +GIG +A+RL Q + + ++ + T + +G
Sbjct: 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV-TGT 68
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHF 154
V E+ R+ G V ILV+NA + P + + +V K VNV A
Sbjct: 69 VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATV 128
Query: 155 W 155
Sbjct: 129 L 129
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 82.6 bits (205), Expect = 5e-20
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
++ ++TG +GIG + L + + + +DE + +K+
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE-----------KSDVNVSDHFKI 60
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DV+N EEV +K K+ G + ILVNNAGI PL+ ++ R+ DVNV
Sbjct: 61 DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNV 113
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 82.0 bits (203), Expect = 7e-20
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 14/120 (11%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
S + IL+ G +G E+ K + + D E N + H++
Sbjct: 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------HSFT 65
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFW 155
+ S EE+ V +K+ + +V V AG +++ ++ D+N+ + F
Sbjct: 66 IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFA 125
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 81.8 bits (203), Expect = 7e-20
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRT 91
P S L+G +++TG GIGR +A + + + ++ G+
Sbjct: 2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61
Query: 92 FHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
+ DVS+R + +A + +E G + ++ NAG+ P PL P+ + F VNV
Sbjct: 62 VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVN 121
Query: 152 AHFW 155
F+
Sbjct: 122 GTFY 125
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 81.8 bits (203), Expect = 8e-20
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L + ++TG GIGR +A + + + D+ +G + G + +
Sbjct: 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKA-IGLE 67
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+V++ + V + G++T+LVNNAG KP + F +N+ + F
Sbjct: 68 CNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFR 125
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 81.8 bits (203), Expect = 8e-20
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 1/120 (0%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGT-RTFHTY 95
L + ++TG +GIG + L + + D + + ++
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV + +V A+ + +G +ILVNNAG E + + + +
Sbjct: 65 VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIH 124
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 81.4 bits (202), Expect = 8e-20
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L+G++I+LT GIG+ A ++ + + DI+E E ++ P Q T
Sbjct: 2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ------TR 55
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
LDV+ ++++ + A+ EV + +L N AG + + + + + ++NV + +
Sbjct: 56 VLDVTKKKQIDQFAN----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYL 111
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 81.9 bits (203), Expect = 9e-20
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 29 TLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG 88
L S + + L+TG G+GIGR A L E G
Sbjct: 17 NLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG 76
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFD 147
+ + DVS+ ++ + + G + I+V NAGI P+++ KP +T
Sbjct: 77 GQAI-ALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135
Query: 148 VNV 150
VN+
Sbjct: 136 VNL 138
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 81.4 bits (202), Expect = 1e-19
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SLEG++ L+TG G+G G +AKR + + + D D+ G E G
Sbjct: 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA---GEIGDAAL-AVA 61
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+S +V + + G+V ILVNNAGI + +P+ + VNV +
Sbjct: 62 ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 81.0 bits (201), Expect = 2e-19
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTF 92
P E ++ ++TG G GIG+ A+ L ++ + + DI+ + + G
Sbjct: 2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI 61
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPC---KPLNEQKPDVIRKTFDVN 149
+ +DVS+ E +AD+ E G + LVNNA I L P+ +K VN
Sbjct: 62 -SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVN 120
Query: 150 V 150
+
Sbjct: 121 L 121
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 81.0 bits (201), Expect = 2e-19
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
G+ +L+TG GIGR +A+ ++ +L D+ +G K++ E G F
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAIGGAFFQV--- 56
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
D+ + E +R ++ +G V +LVNNA I + R+ +VN+
Sbjct: 57 DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 109
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 80.7 bits (200), Expect = 3e-19
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL G ++TG G+GIGR +A + + + W + E + G +
Sbjct: 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG-GSAEAVV 85
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
D+++ E VA+++ V +LVNNAGI+ P E R+ VN+ A +
Sbjct: 86 ADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAW 142
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 80.3 bits (199), Expect = 3e-19
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L +++++TG GIGR +A+R + S + I + G + +
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIEC 53
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DV+N ++V D + KE G +++LVNNAGI + R+ DVN+
Sbjct: 54 DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNL 106
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 80.4 bits (199), Expect = 3e-19
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 29 TLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG 88
+++ + S EG I L+TG G G+GR +A+ L + + + +
Sbjct: 22 SMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT 81
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFD 147
DV + ++V + VR E + +LVNNAG +P PL E +
Sbjct: 82 GNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVA 141
Query: 148 VNV 150
N+
Sbjct: 142 ANL 144
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 79.9 bits (198), Expect = 4e-19
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
K LEG+++++TG G+G+ +A R +K + + + E N + ++ G
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-A 61
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
K DV+ +V+ + KE G++ +++NNAG+ +E K D N+ F
Sbjct: 62 VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF 121
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 80.3 bits (199), Expect = 4e-19
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L G++ ++TG G GIG +A+RL + +C DID + + G ++
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA---TKIGCGA-AACRV 82
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DVS+ ++++ + D G V LV NAG++ L + + + +N+
Sbjct: 83 DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINL 135
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 79.9 bits (198), Expect = 5e-19
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 32 PPSEKSLEGEIILLTG-LGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTR 90
L+G+++L+T G GIG A+R + + + D E+ ET+ + G
Sbjct: 14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG 73
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 149
DV++ E V + + ++ G + +LVNNAG+ P+ + + + +V
Sbjct: 74 RVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVT 132
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 80.3 bits (199), Expect = 5e-19
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL+G+I L+TG GIG +A + + + DI+++ + + G H Y
Sbjct: 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG-INAHGYV 89
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
DV++ + + + ++ EVG + ILVNNAGI+ P+ E R+ D+++ A F
Sbjct: 90 CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPF 147
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 79.5 bits (197), Expect = 5e-19
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGT 89
+ I++ G G IGR A R Q+ ++ +G E+ G
Sbjct: 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEG-----ANVVLTYNGAAEGAATAVAEIEKLGR 58
Query: 90 RTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDV 148
K D++N EV + GE+ LV+ AG ++ K + E + DV
Sbjct: 59 SAL-AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117
Query: 149 NVLAHF 154
N+ + F
Sbjct: 118 NLTSLF 123
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 79.5 bits (197), Expect = 5e-19
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L G+ +++TG G+G E A++ + + D+ ++ T E G L
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA---RELGDAA-RYQHL 58
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DV+ E+ RV R+E G V LVNNAGI L + + RK ++N+
Sbjct: 59 DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL 111
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 79.5 bits (197), Expect = 5e-19
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
SL G++ ++TG GIG +A++L + + D + ++ G ++
Sbjct: 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEA-ESH 83
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPC-KPLNEQKPDVIRKTFDVNVLAHF 154
D+S+ + + A V G +LVNNAG+ PL+ KP VN+ A +
Sbjct: 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143
Query: 155 W 155
Sbjct: 144 L 144
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 80.0 bits (198), Expect = 6e-19
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMP 84
P SLEG++ L+TG G GIGRE+A L ++ + + E
Sbjct: 22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN-------STESAEEVVAAI 74
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
++ G+ K +V E+++R+ ++ K G++ I+ +N+G++ + + P+ +
Sbjct: 75 KKNGSDAA-CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDR 133
Query: 145 TFDVNVLAHF 154
F +N F
Sbjct: 134 VFTINTRGQF 143
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 79.6 bits (197), Expect = 6e-19
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFH-- 93
+ +++TG NGIGR A Q+ + + ET+Q+ + G
Sbjct: 2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPL----NEQKPDVIRKTFDVN 149
+ DV+ + ++ + K+ G++ +LVNNAG +Q D+ KT +N
Sbjct: 62 SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121
Query: 150 V 150
+
Sbjct: 122 L 122
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 79.5 bits (197), Expect = 6e-19
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 35 EKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQG 88
+ + ++L+TG GIG + + +Q W + + + + E G
Sbjct: 21 QSMSDTPVVLVTGGSRGIGAAVCRLAARQG-----WRVGVNYAANREAADAVVAAITESG 75
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFD 147
DV N ++ + V ++ G + LVNNAGI+ + ++E + I +
Sbjct: 76 GEAV-AIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134
Query: 148 VNVLAHF 154
VNV
Sbjct: 135 VNVTGSI 141
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 79.1 bits (196), Expect = 7e-19
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+G +TG G+GIG E+ + + + D + + +E G
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA---QELGAAVAARIV 64
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV++ E + A + + V V+ILVN+AGI E R+ VNV FW
Sbjct: 65 ADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFW 122
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 79.6 bits (197), Expect = 7e-19
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG--TRTFH 93
++ ++TG NGIGR A ++ + + ET+Q G + +
Sbjct: 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPC----KPLNEQKPDVIRKTFDVN 149
+ DV+ + + G++ ILVNNAG K Q + T ++N
Sbjct: 62 SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121
Query: 150 V 150
+
Sbjct: 122 L 122
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 79.5 bits (197), Expect = 8e-19
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ L +I ++TG +GIG AKR + + + + E G
Sbjct: 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIGGGA-VGI 80
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+ D +N E+ R+ +KV+ E G + +L NAG PL E + TFD NV
Sbjct: 81 QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL 139
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 79.2 bits (196), Expect = 8e-19
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 29 TLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG 88
L+P + +TG+ +GIG +A+ L + D K + G
Sbjct: 13 GLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG 72
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
DV++ +EV + G + ILVN+AG
Sbjct: 73 HDV-DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGR 111
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 79.5 bits (197), Expect = 9e-19
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI-------DEKGNNETKQMPE 85
S + L+ L+TG +GIGR A ++ D+ +E+ + K + E
Sbjct: 43 GSGR-LKDRKALVTGGDSGIGRAAAIAYAREG-----ADVAINYLPAEEEDAQQVKALIE 96
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRK 144
E G R D+S+ + K R+ +G + IL AG + + + ++
Sbjct: 97 ECG-RKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQ 155
Query: 145 TFDVNVLAHFW 155
TF VNV A FW
Sbjct: 156 TFAVNVFALFW 166
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 79.1 bits (196), Expect = 1e-18
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL+G L+TG GIG + + L + +EK +E ++ E+G
Sbjct: 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNV-EGSV 76
Query: 97 LDVSNREEVLRVADKVRKEV-GEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+ +R E ++ V G++ ILVNNAG++ K + N A +
Sbjct: 77 CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYH 136
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 79.2 bits (196), Expect = 1e-18
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMP 84
+ K L G++ L TG G GIGR +A L ++ S K E
Sbjct: 14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS-------SSKAAEEVVAEL 66
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
++ G + + D+S EV+ + DK G + +++N+G+ E ++ K
Sbjct: 67 KKLGAQGV-AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDK 125
Query: 145 TFDVNVLAHF 154
F++N F
Sbjct: 126 VFNLNTRGQF 135
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 79.1 bits (196), Expect = 1e-18
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
G+++++TG G GIG + + + + D DE G + +E F
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE---QELPGAVF--ILC 61
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV+ ++V + + + G + +VNNAG P + E R+ ++N+L +
Sbjct: 62 DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 120
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 78.7 bits (195), Expect = 1e-18
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
LEG+I ++TG +GIGR A ++ + + + E G
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA-AALAG 64
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 150
DV + + + + G + NNAG + ++ + R+T D N+
Sbjct: 65 DVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNL 118
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 78.3 bits (194), Expect = 1e-18
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 40 GEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNET-KQMPEEQGTRTFHTYKLD 98
+ ++TG +G G +A R + D+ + ET + + + D
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVL-RVRAD 60
Query: 99 VSNREEVLRVADKVRKEVGEVTILVNNAGIM---PCKPLNEQKPDVIRKTFDVNV 150
V++ +V ++ G + +LVNNAGI L+ + K VNV
Sbjct: 61 VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 78.3 bits (194), Expect = 1e-18
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L+G++ L+TG +G+G E+ K L + + DI+E + E G R+ +
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA---AELGERS-MFVRH 59
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DVS+ + V V++ +G + +LVNNAGI+ + + + + +N + F
Sbjct: 60 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFI 117
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 78.3 bits (194), Expect = 1e-18
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ G++ ++TG +GIG +A+ ++ + + +E + +E+
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+DV+ E V V + VR G ILVNNAG + + E + + +++ V+A
Sbjct: 64 VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 78.0 bits (193), Expect = 2e-18
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
S L+TG GIG+ + + L Q K + DI + + E
Sbjct: 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN-----------LKFI 49
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
K D++ ++++ V D ++ + NAGI+ + + + I+K D+NV
Sbjct: 50 KADLTKQQDITNVLDIIKN--VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNV 102
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 78.3 bits (194), Expect = 2e-18
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMPE 85
L+ ++I++ G +G AK + D N+ K E
Sbjct: 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQ-----AKDSDTANKLKDELE 59
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKT 145
+QG + Y+ D+SN EEV ++ D KE G+V I +N G + KP+ E
Sbjct: 60 DQGAKVA-LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAM 118
Query: 146 FDVNVLAHF 154
+N +
Sbjct: 119 DTINNKVAY 127
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 78.4 bits (194), Expect = 2e-18
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 16/129 (12%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMPE 85
+ SL G+ +TG GIG +AKRL + + + E
Sbjct: 25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN-------AAERAQAVVSEIE 77
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKT 145
+ G R + D + E + + + + +G + ILVN+AGI PL E +
Sbjct: 78 QAGGRAV-AIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEV 136
Query: 146 FDVNVLAHF 154
VN A F
Sbjct: 137 MAVNFRAPF 145
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 78.2 bits (193), Expect = 2e-18
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 37 SLEGEIILLTGLGN-GIGRELAKRLFQQKSL--WM-CWDIDEKGNNETKQMPEEQGTRTF 92
S + L+TG GN GIG + + L + S + D+ +G +Q+ E + F
Sbjct: 1 SSGIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDV-TRGQAAVQQLQAEGLSPRF 58
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
H +LD+ + + + + D +RKE G + +LVNNAGI T N
Sbjct: 59 H--QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 116
Query: 153 HF 154
Sbjct: 117 TR 118
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 77.9 bits (193), Expect = 2e-18
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+LEG L+TG GIG + + L + ++K N+ +G
Sbjct: 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASV 64
Query: 97 LDVSNREEVLRVADKVRKE-VGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+S+R E + + V G++ ILVNNAGI+ K + + +N A +
Sbjct: 65 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 124
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 78.0 bits (193), Expect = 2e-18
Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG--TRTFHT 94
+ + ++TG GIG +A L + ++ + +
Sbjct: 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
LD+++ + + ++ G V ILVN A + L + D RK ++NV
Sbjct: 64 LPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINV 118
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 78.0 bits (193), Expect = 2e-18
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 16/126 (12%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMPEEQG 88
++ ++TG GIG +A RL E E G
Sbjct: 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAG-------KAAAAEEVAGKIEAAG 76
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDV 148
+ T + DVS+ V R+ + G V +LVNNAGIMP + E V + V
Sbjct: 77 GKAL-TAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAV 135
Query: 149 NVLAHF 154
N+ F
Sbjct: 136 NLKGTF 141
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 78.4 bits (194), Expect = 3e-18
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGT--RTFH 93
G+ +++TG NGIGR A ++ + +E ETKQ + G +
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI--MPCKPLNEQKPDVIRKTFDVNVL 151
DV+ + + + G++ ILVNNAG +Q ++ +KTF +N
Sbjct: 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141
Query: 152 AHFW 155
A
Sbjct: 142 AVIE 145
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 77.5 bits (192), Expect = 3e-18
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ + L+TG G+G+ A RL + ++ + + +K ET + E+ G + K
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKV-LVVK 60
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+V ++ + ++ + G + + VNNA +P+ E + T ++N A +
Sbjct: 61 ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLF 119
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 77.6 bits (192), Expect = 3e-18
Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 37 SLEGEIILLTGLGN--GIGRELAKRLFQQKSLWMCWDID--EKGNNETKQMPEEQGTRTF 92
SL+G+++++TG G+G E A+ + + + K++ + G +
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKA- 75
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
YK V + E ++ V + G++ + NAG + + + V++
Sbjct: 76 KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135
Query: 153 HFW 155
F
Sbjct: 136 TFH 138
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 77.6 bits (192), Expect = 4e-18
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMPEEQ 87
L+G++ L+TG G GIG +A L + + K + +
Sbjct: 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN-------STKDAEKVVSEIKAL 66
Query: 88 GTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFD 147
G+ K D+ E++++ D+ G + I V+N+G++ L + + + F
Sbjct: 67 GSDAI-AIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125
Query: 148 VNVLAHF 154
+N F
Sbjct: 126 LNTRGQF 132
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 77.2 bits (191), Expect = 5e-18
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
K+L+ ++ ++TG GIGR +A L ++ ++ + E G ++ G
Sbjct: 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEG-RGA 82
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
L+V++ V + + KE G + +LVNNAGI
Sbjct: 83 VLNVNDATAVDALVESTLKEFGALNVLVNNAGI 115
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 76.8 bits (190), Expect = 5e-18
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETK--QMPEEQGTRTFHT 94
SL+ +I ++TG G+G E+ K L + ++ G N + E +G
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL------GRNPEHLAALAEIEGV---EP 52
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
+ D+ DK+ K + V LV+ A + + D+NV+
Sbjct: 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIV 109
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 77.2 bits (191), Expect = 5e-18
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 38 LEGEIILLTGLGNGIGRELAKRL-------------FQQKSLWMCWDIDEKGNNETKQMP 84
LEG + +TG G GR A R+ + S +ET ++
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
E R +D + + + +V D +G + I+V NAG+ + ++ P+ R
Sbjct: 69 EAAN-RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 145 TFDVNV 150
D+NV
Sbjct: 128 VMDINV 133
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 76.9 bits (190), Expect = 6e-18
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGT 89
+ L + +L+TG GIG+ A + + + EK K + +E
Sbjct: 29 ERLAKKTVLITGASAGIGKATALEYLEASNGD--MKLILAARRLEKLEELKKTIDQEFPN 86
Query: 90 RTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDV 148
H +LD++ E++ + + +E ++ ILVNNAG + + + + I+ FD
Sbjct: 87 AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146
Query: 149 NVLA 152
NV A
Sbjct: 147 NVTA 150
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 77.2 bits (191), Expect = 6e-18
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
E ++ L+TG G GIGRE+AK L + S +C +K + + G + Y
Sbjct: 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES-SGY 98
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
DVS +EE+ V +K+ E V ILVNNAGI
Sbjct: 99 AGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 76.5 bits (189), Expect = 8e-18
Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 12/118 (10%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
EG++ L+TG GIG + L + D H
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAV-----------AGIAADLH-LPG 73
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+ + V +G + I+VNNAG++ + E + VNV A F
Sbjct: 74 DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFR 131
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 76.9 bits (190), Expect = 8e-18
Identities = 22/93 (23%), Positives = 34/93 (36%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L +L+TG GIGR +A + + + + E G
Sbjct: 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+LDVS+ A V G + ++ NAGI
Sbjct: 97 RLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 76.0 bits (188), Expect = 1e-17
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L G++ L++G G+G + + + + + DI ++ E L
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA---AELADAA-RYVHL 60
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DV+ + D G + +LVNNAGI+ + + ++ DVN+
Sbjct: 61 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL 113
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 76.0 bits (188), Expect = 1e-17
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL ++ L+TG GIG E+A L + + + + + + +E+G +
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKA-RGLV 60
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
L++S+ E + +++ E + ILVNNAGI
Sbjct: 61 LNISDIESIQNFFAEIKAENLAIDILVNNAGI 92
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 76.5 bits (189), Expect = 1e-17
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ + E+ L+TG +GIG E+A+RL ++ E+G T + E G
Sbjct: 18 ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGR 76
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
DV + E+ + V + G V +LVNNAG
Sbjct: 77 TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 75.6 bits (187), Expect = 1e-17
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ L G+ L+TG GIG+ +A RL + + DI+ +G K G +
Sbjct: 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASIGKKA-RAI 57
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
D+S+ V + +++ G + ILVNNA I
Sbjct: 58 AADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 75.3 bits (186), Expect = 2e-17
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+L+G+ L+TG +GIG +A+ L + + + + G + H +
Sbjct: 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVH-HP 57
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
D+S+ ++ + +E G V ILVNNAGI P+ + + K +N+ A F
Sbjct: 58 ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 75.6 bits (187), Expect = 2e-17
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
LE ++ ++TG GIG E ++ L + + + D+ E + G + +
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASVGRGA-VHHVV 64
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCK--PLNEQKPDVIRKTFDVNV 150
D++N V + D G + I+ NNA + + DV TF VN
Sbjct: 65 DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 75.3 bits (186), Expect = 2e-17
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGTRT 91
+ ++IL+TG GIG +A+ L I + ++ + GT
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAG-----AKILLGARRQARIEAIATEIRDAGGT-- 54
Query: 92 FHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
LDV++R V A G + +LVNNAG+MP PL K D + DVN+
Sbjct: 55 ALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK 114
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 75.6 bits (187), Expect = 2e-17
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL+ + +L+TG GIG + + ++ +E NE +++G +
Sbjct: 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV-TGSV 69
Query: 97 LDVSNREEVLRVADKVRKEVG-EVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D S R E ++ V G ++ IL+NN G + KP + + N+ + +
Sbjct: 70 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 74.9 bits (185), Expect = 3e-17
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN------------ETKQM 83
+L+G++ L+TG +GIG A+ L + G
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAE------------GAAVAIAARRVEKLRALGDE 50
Query: 84 PEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR 143
G + H +LDV++R+ V + +G + ILVNNAGIM P+ +
Sbjct: 51 LTAAGAK-VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWT 109
Query: 144 KTFDVNVL 151
+ D N+L
Sbjct: 110 RMIDTNLL 117
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 74.9 bits (185), Expect = 3e-17
Identities = 21/119 (17%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+++ +++++TG +G+G+ +A R ++ + + ++ E K E+ + T +
Sbjct: 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQIL-TVQ 61
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+DV N +++ ++ +++ ++ G + IL+NNA P + + ++ + F+
Sbjct: 62 MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFY 120
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 74.9 bits (185), Expect = 4e-17
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
SL G I L+TG GIG+ +A+ L + + D + +T G
Sbjct: 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD--CQAIP 83
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+S+ R+A + + + ILVNNAG L K +NV + F
Sbjct: 84 ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 75.0 bits (185), Expect = 4e-17
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L GE+ L+TG +G+GR L R + + D + +++ G
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE---RLRELEVAHGGNA-VGVVG 58
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFD----VNVLA 152
DV + ++ R A++ G++ L+ NAGI L + D I FD VNV
Sbjct: 59 DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 153 HF 154
+
Sbjct: 119 YI 120
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 74.1 bits (183), Expect = 5e-17
Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ +G+ ++ G +G+G +RL + + + +E + EE G R H
Sbjct: 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR---EEFGPRV-HAL 59
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+ D+++ E+ + + +G + +L NAG+ +P ++ + F VN F
Sbjct: 60 RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF 118
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 74.2 bits (183), Expect = 6e-17
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNET--KQMPEEQGTRTFH 93
+S+ + ++TG +GIG +A+ L + + + T ++ H
Sbjct: 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAH 153
+ D++ E+ + V G ILVNNAG+ + + + + + VN+ +
Sbjct: 81 -HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS 139
Query: 154 F 154
F
Sbjct: 140 F 140
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 74.1 bits (183), Expect = 7e-17
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEE 86
SEK L+G+ +L+TG +GIGR ++ ++ + +I +E NETKQ E+
Sbjct: 41 GSEK-LKGKNVLITGGDSGIGRAVSIAFAKEGA-----NIAIAYLDEEGDANETKQYVEK 94
Query: 87 QGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKT 145
+G D+S+ + + + +++G + ILVNN P + L + + KT
Sbjct: 95 EG-VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153
Query: 146 FDVNVLAHFW 155
F +N+ ++F
Sbjct: 154 FRINIFSYFH 163
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 73.8 bits (182), Expect = 7e-17
Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETK--QMPEEQGTRTFH 93
+ +++++TG +GIG +A+R ++ + + +
Sbjct: 12 RGSMKKLVVITGASSGIGEAIARRFSEEG-----HPLLLLARRVERLKALNLPN----TL 62
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
++DV+++ + K G +VNNAG+M ++ Q+ + ++ FDVNVL
Sbjct: 63 CAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 74.1 bits (183), Expect = 7e-17
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI-------------DEKGNNETKQM 83
SL+G + +TG G GR A RL + + + DI + +ET ++
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 84 PEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR 143
E+QG R T LDV + + + ++ G + ++V NAG++ + E +
Sbjct: 72 VEDQG-RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 144 KTFDVNV 150
VN+
Sbjct: 131 TVIGVNL 137
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 73.8 bits (182), Expect = 8e-17
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+I ++TG G+G+GR +A L ET E G
Sbjct: 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA---AEIGDDA-LCVP 80
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHF 154
DV++ + V + ++ G V +L NNAG P P+ + ++ D N+ F
Sbjct: 81 TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPF 139
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 73.4 bits (181), Expect = 9e-17
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 42 IILLTGLGNGIGRELAKRLFQQ--KSLWMCWDI-----DEKGNNETKQMPEEQGTRTFHT 94
I+L+TG G GIGR +A + + + +G T T
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT-DT 62
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
D+S+ +V R+ + + G + LVNNAG+ L++ + T + N+
Sbjct: 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL 118
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 73.7 bits (182), Expect = 9e-17
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQ----KSLWMCWDIDEKGN--------NE 79
P S EG+ L+TG G+GR A L + C + D G E
Sbjct: 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAE 61
Query: 80 TKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKP 139
T + E+ G R + K+DV +R + + +G + I + NAGI L E +
Sbjct: 62 TVALVEKTG-RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVES 120
Query: 140 DVIRKTFDVN 149
+ N
Sbjct: 121 AQWDEVIGTN 130
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 73.3 bits (181), Expect = 1e-16
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+ + +L+TG +GIGR + ++ + + DI+E E +
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP------VV 55
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+DV++ V R + +G + +V+ AGI
Sbjct: 56 MDVADPASVERGFAEALAHLGRLDGVVHYAGI 87
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 73.4 bits (181), Expect = 1e-16
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
L+G+ +L+TG GIG A+ + + + +ET G
Sbjct: 3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDA-AF 61
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDVNVLAH 153
+ D++ E ++ D+ + G + +L+NNAG ++ KPL E D N+ +
Sbjct: 62 FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSV 121
Query: 154 F 154
Sbjct: 122 V 122
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 73.5 bits (181), Expect = 1e-16
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 40 GEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNE--TKQMPEEQGTRTFHTYKL 97
G++IL+TG+ GIG+ + LF + + +E K++ E+ G R F
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTV---VYGVARSEAPLKKLKEKYGDR-FFYVVG 57
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHF 154
D++ + ++ + K G++ LV NAG++ P + +NE + +K +D+N +
Sbjct: 58 DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIV 115
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 72.9 bits (180), Expect = 1e-16
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L G +L+TG G GIGR + L + + + + +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-----CPGIEPVC 58
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+D+ + E R VG V +LVNNA + +P E + ++F+VN+ A
Sbjct: 59 VDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQ 113
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 73.8 bits (182), Expect = 1e-16
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ----KSLWMCWDIDEKGN--------NETKQM 83
L+G++ +TG G GR A RL Q ++ +C ET ++
Sbjct: 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 84 PEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR 143
EEQG R + DV + + V D+ E G + ILV+N GI +
Sbjct: 102 VEEQG-RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWS 160
Query: 144 KTFDVN 149
N
Sbjct: 161 DILQTN 166
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 72.9 bits (180), Expect = 1e-16
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 35 EKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI-DEKGNNETKQMPEEQGTRTFH 93
E L+G++ L+TG GIGR +A++L S + E+ +++ + G + H
Sbjct: 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKA-H 60
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
++++ + E + + +++ V + ILVNNAGI
Sbjct: 61 GVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 73.0 bits (180), Expect = 1e-16
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTF--- 92
L + L+TG G+GIGR ++ RL + + D+D ET ++ G++
Sbjct: 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62
Query: 93 ---HTYKLDVSNREEVLRVADKVRKEVGE-VTILVNNAGI 128
++ DVS + ++V+ +++V+ AGI
Sbjct: 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 72.8 bits (179), Expect = 2e-16
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 29/140 (20%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN------------ETK-Q 82
L + +LTG G GR LA +L + S G+ + K +
Sbjct: 2 DGLGCAVCVLTGASRGFGRALAPQLARLLS---------PGSVMLVSARSESMLRQLKEE 52
Query: 83 MPEEQGTRTFHTYKLDVSNREEVLRVADKVRK----EVGEVTILVNNAGI---MPCKPLN 135
+ +Q D+ V R+ VR+ E + +L+NNA + LN
Sbjct: 53 LGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLN 112
Query: 136 EQKPDVIRKTFDVNVLAHFW 155
+ + +N+ +
Sbjct: 113 VNDLAEVNNYWALNLTSMLC 132
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 72.7 bits (179), Expect = 2e-16
Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 13/121 (10%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ--KSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
L + ++ GIG + ++ L ++ K+ + D E +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNF-VILDRVENPTALAELKAINPKVNITF- 59
Query: 95 YKLDVS-NREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAH 153
+ DV+ E ++ K+ ++ V IL+N AGI+ I +T +N
Sbjct: 60 HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGL 111
Query: 154 F 154
Sbjct: 112 V 112
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 72.6 bits (179), Expect = 2e-16
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ I +TG GIG + +RL + + + + + + G F+
Sbjct: 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD-FYAS 68
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+ +V + + + DKV+ EVGE+ +LVNNAGI
Sbjct: 69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 72.5 bits (179), Expect = 2e-16
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L+G+ ++TG G+G+ +A +L ++ + + T + + G
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINV-VVA 60
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
K DV N E+V + G + ILVNNAGI
Sbjct: 61 KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 72.6 bits (179), Expect = 2e-16
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 29 TLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQG 88
+ S L+ ++ ++TG GIG AK + + + DI + +
Sbjct: 5 STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD 64
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP--CKPLNEQKPDVIRKTF 146
+F DV+ E+V + D + G++ I+ N G++ + E + ++
Sbjct: 65 VISF--VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVM 122
Query: 147 DVNVLAHFW 155
D+NV F
Sbjct: 123 DINVYGAFL 131
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 72.6 bits (179), Expect = 2e-16
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTF 92
+ L I L+TG GIGR +A L + + + +E G
Sbjct: 22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEA- 80
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
K DVS EV + V + G + +LVNNAGI
Sbjct: 81 FAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 72.0 bits (177), Expect = 3e-16
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDI--DEKGNNETKQMPEEQGTRTFHTYKLDV 99
+++TG GIG L ++L + K++ D + E K + + + H L V
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR----VHVLPLTV 60
Query: 100 SNREEVLRVADKVRKEVGEVTI--LVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLA 152
+ + + KV + VG + L+NNAG++ E VI + DVN +
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 71.8 bits (177), Expect = 3e-16
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 42 IILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETK--QMPEEQGTRTFHTYKLD 98
+I++TG +G+G ELAK + + ++ G +E+K + D
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLT------GRSESKLSTVTNCLSNNV-GYRARD 55
Query: 99 VSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
+++ +EV ++ +++ + +V++AG L EQ P+ I+ + N+ +
Sbjct: 56 LASHQEVEQLFEQLD---SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSS 106
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 72.2 bits (178), Expect = 4e-16
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
+ ++TG GIG +A+ L + + D +G G R
Sbjct: 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARV-IF 83
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI--MPCKPLNEQKPDVIRKTFDVNV 150
+ D+++ D V E G + LVNNAGI + + KP+ VN+
Sbjct: 84 LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL 141
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 71.8 bits (177), Expect = 4e-16
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 10/119 (8%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ +++++TG GIG L + + + K HT
Sbjct: 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------PSADPDI-HTV 73
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
D+S E R+ + + G + LVNNAG+ KP E + VNV F
Sbjct: 74 AGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFF 132
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 71.9 bits (177), Expect = 4e-16
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI-DEKGNNETKQMPEEQGTRTFHTYK 96
L+G++ ++TG +GIG +A L Q + + D + + Q
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
D+S E V + D +++G + ILVNNAGI + + + +N+ A F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 71.9 bits (177), Expect = 5e-16
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNET-KQMPEEQGTRTFHT 94
+ G++ L+TG GIGR A+ L + + D + + + + E+ +
Sbjct: 3 HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
+ DV++++++ KV G + ILVNNAG+ KT +N+
Sbjct: 63 IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINL 110
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 71.4 bits (176), Expect = 6e-16
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L G+ IL+TG +GIGR ++ + + D +E+ E
Sbjct: 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEA-IAV 57
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 149
DVS+ + V V + +E G + + + AG+ + K VN
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVN 111
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 71.0 bits (175), Expect = 7e-16
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMPE 85
+ L+G++ L+TG GIGR +AKRL + ++ ET +
Sbjct: 1 ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN-------RKEEAEETVYEIQ 53
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVT------ILVNNAGIMPCKPLNEQKP 139
G F + ++ + V + + E+ T IL+NNAGI P + E
Sbjct: 54 SNGGSAF-SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTE 112
Query: 140 DVIRKTFDVNVLAHF 154
+ VN A F
Sbjct: 113 QFFDRMVSVNAKAPF 127
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 71.4 bits (176), Expect = 7e-16
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ +TG G+G +++RL ++ + + + G F Y
Sbjct: 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRD-FKAYA 81
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+DV++ E R A+KV + G+V +L+NNAGI
Sbjct: 82 VDVADFESCERCAEKVLADFGKVDVLINNAGI 113
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 71.0 bits (175), Expect = 7e-16
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
G+ + +TG G GIG A + + +D ++ F T
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF----------TQEQYP-FATEV 52
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+DV++ +V +V ++ E + LVN AGI+ ++ + ++TF VNV F
Sbjct: 53 MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAF 110
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 71.2 bits (175), Expect = 9e-16
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 12/121 (9%)
Query: 43 ILLTGLGNGIGRELAKRLFQQKSLWMCWDI-----DEKGNNETKQMPEEQGTRTFHTYKL 97
IL+TG G+G L K L + + + E + + + H ++
Sbjct: 24 ILITGCNRGLGLGLVKALLNLPQPP--QHLFTTCRNREQAKELEDLAKNHS--NIHILEI 79
Query: 98 DVSNREEVLRVADKVRKEVGEVTI--LVNNAGIMPC-KPLNEQKPDVIRKTFDVNVLAHF 154
D+ N + ++ + + + L NNAGI P + + + T N +
Sbjct: 80 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139
Query: 155 W 155
Sbjct: 140 M 140
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 70.6 bits (174), Expect = 9e-16
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSN 101
+++TG G+GIG+++ + DIDEK + + ++ F + DV++
Sbjct: 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLF-YFHGDVAD 58
Query: 102 REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 149
+ + + +++ + +LVNNA L+ + V
Sbjct: 59 PLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVG 106
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 71.1 bits (175), Expect = 9e-16
Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDID-EKGNNETKQMPEEQGTRTFHTYK 96
L ++ +TG G+GIG +A+ + + + +++ G R
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC-LPLS 83
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+DV V+ D+ KE G + IL+N A P + + D++ F
Sbjct: 84 MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFN 142
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 70.6 bits (174), Expect = 9e-16
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ L+TG GIGR +A +L ++ ++ + + ++ + + +G + +
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS-FAIQ 60
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+V++ +EV + +V + G + +LVNNAGI
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 71.1 bits (175), Expect = 9e-16
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN------------ETKQMPE 85
++ +++L+TG G GR A +L ++ + + +DI E E
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKT 145
+ G R +T ++DV +R V R E G++ ++V NAGI C
Sbjct: 68 KTG-RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI--CPLGAHLPVQAFADA 124
Query: 146 FDVNV 150
FDV+
Sbjct: 125 FDVDF 129
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 70.6 bits (174), Expect = 1e-15
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 42 IILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVS 100
L+TG GIGR +A RL + +L + + + + E + +G+ ++
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 101 NREEVLRVADKVRKEVGEVTILVNNAGI 128
E + + + +G + LVNNAGI
Sbjct: 63 EAEAATALVHQAAEVLGGLDTLVNNAGI 90
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 70.6 bits (174), Expect = 1e-15
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRT 91
P S L G L+TG GIG +A+ Q ++ E E + G
Sbjct: 19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA---ADLGKDV 75
Query: 92 FHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+ ++S+R+ + ++A+ +E+ + ILVNNAGI
Sbjct: 76 -FVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 71.1 bits (175), Expect = 1e-15
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 14/126 (11%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKS----LWMCWDIDEKGN--------NETKQMPE 85
+EG++ +TG G GR A L ++ + + +C +D ET + E
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRK 144
G R ++DV + + + D ++G + I++ NA + LN P R
Sbjct: 86 ALG-RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 145 TFDVNV 150
DVN+
Sbjct: 145 MIDVNL 150
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 70.3 bits (173), Expect = 1e-15
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ G++ ++TG GIGR +A +L + + Q + G
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-GQCVPVV 60
Query: 97 LDVSNREEVLRVADKVRKEV-GEVTILVNNAGIMPC-------KPLNEQKPDVIRKTFDV 148
D S EV + ++V +E G + +LVNNA K E + +V
Sbjct: 61 CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120
Query: 149 NVLAHF 154
+ H+
Sbjct: 121 GLRGHY 126
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 70.2 bits (173), Expect = 1e-15
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
L+G++ L+TG GIGR +A L +Q ++ + + +E+ NE ++ G+ +
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA-IAVR 60
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
DV+N E+V + + G+V ILVNNAG+
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 70.7 bits (174), Expect = 2e-15
Identities = 23/119 (19%), Positives = 45/119 (37%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
S +G++ +TG G G+G+ + L + + T + Q H +
Sbjct: 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
DV + + V ++ K G I++NNA P P+ + D+ + +
Sbjct: 83 CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 70.3 bits (173), Expect = 2e-15
Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 27/134 (20%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN------------E 79
S + +TG +G G A+R + G +
Sbjct: 13 LVPRGSHMSSTLFITGATSGFGEACARRFAEA------------GWSLVLTGRREERLQA 60
Query: 80 TKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQK 138
+ LDV +R + D + +E + L+NNAG+ P
Sbjct: 61 LAGELSAKTR--VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCD 118
Query: 139 PDVIRKTFDVNVLA 152
D D N+
Sbjct: 119 LDDWDTMVDTNIKG 132
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 69.8 bits (172), Expect = 2e-15
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+ G L+TG G GIGR+ K L + + ++
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA----KEC-PGIEPVC 58
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+D+ + + + +G V +LVNNA ++ +P E + ++F VN+ + F
Sbjct: 59 VDLGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 112
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 70.3 bits (173), Expect = 2e-15
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGN----------------NETK 81
+EG++ +TG G GR A RL Q+ + + DI + ET
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 82 QMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPD 140
+ + R T ++DV + + + D +++G + I+V NAGI L++ +
Sbjct: 69 DLVKGHN-RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 141 VIRKTFDVNV 150
+ D+N+
Sbjct: 128 DWTEMIDINL 137
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 69.4 bits (171), Expect = 3e-15
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
+LEG++ L+TG GIG+ +A+ L ++ + + E G + G
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS---DYLGDNG-KGMA 61
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
L+V+N E + V + E G V ILVNNAGI
Sbjct: 62 LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 70.6 bits (173), Expect = 3e-15
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 10/130 (7%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMP 84
P+ L G + +TG GIG+ +A + + K+ + +
Sbjct: 38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL-LGTIYTAAEEI 96
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
E G + +DV + +++ +K K+ G + ILVNNA + + +
Sbjct: 97 EAVGGKAL-PCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDL 155
Query: 145 TFDVNVLAHF 154
+VN +
Sbjct: 156 MMNVNTRGTY 165
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 69.5 bits (171), Expect = 3e-15
Identities = 18/92 (19%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L+T G+G+++ ++L + S+ + + D K+ ++ R
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERL-QFV 62
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAG 127
+ DV+ +E++ ++ ++ G++ L+NNAG
Sbjct: 63 QADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 69.4 bits (170), Expect = 6e-15
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCW-------DIDEKGNNETKQMPE--EQGTRTF 92
IIL+TG +G GR A+ L DI + + + +
Sbjct: 7 IILITGASSGFGRLTAEALAGAG-----HRVYASMRDIVGRNASNVEAIAGFARDNDVDL 61
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
T +LDV ++ V R D++ E G + +L++NAG M P P+ + +D+NVL
Sbjct: 62 RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVL 120
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 68.8 bits (169), Expect = 8e-15
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTF---- 92
L+G++ ++TG GIG+ + K L + S + + + T
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 93 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
+ ++ N EEV + G++ LVNN G P + N+
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 153 HFW 155
F+
Sbjct: 135 TFY 137
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 68.5 bits (168), Expect = 9e-15
Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQ--------KSLWMCWDIDEKGNNETKQMP 84
P SL G+ + ++G GIG +AKR+ KS + +
Sbjct: 2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIY-TAAKEI 60
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
EE G + D+ + + V K ++ G + I VNNA + + E
Sbjct: 61 EEAGGQAL-PIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDL 119
Query: 145 TFDVNVLAHFW 155
+ V +
Sbjct: 120 MNGIQVRGTYA 130
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 68.0 bits (167), Expect = 1e-14
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETK--QMPEEQGTRTFHTYKLDV 99
I+L+TG G G + +R QQ + G + + ++ +E G + +LDV
Sbjct: 2 IVLVTGATAGFGECITRRFIQQG-----HKVIATGRRQERLQELKDELGD-NLYIAQLDV 55
Query: 100 SNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLA 152
NR + + + E + ILVNNAG+ + +P ++ + D N
Sbjct: 56 RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKG 109
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 68.0 bits (167), Expect = 1e-14
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 19/124 (15%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGTR 90
+L IL+TG +G A RL + + + E + G
Sbjct: 24 TLSSAPILITGASQRVGLHCALRLLEHG-----HRVIISYRTEHASVTEL----RQAGAV 74
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
D S ++ D ++ + + +V+NA + ++ D + F V++
Sbjct: 75 AL---YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETP-GEEADNFTRMFSVHM 130
Query: 151 LAHF 154
LA +
Sbjct: 131 LAPY 134
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 68.0 bits (167), Expect = 1e-14
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 8/125 (6%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGN-------NETKQMPEEQGT 89
+L G+ + +TG GIG +A R + + N + G
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 90 RTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 149
+ K D+ ++V G + ILVNNA + + + VN
Sbjct: 63 QGL-ALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121
Query: 150 VLAHF 154
F
Sbjct: 122 ARGSF 126
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 67.2 bits (165), Expect = 2e-14
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN------------ETKQMPE 85
L G++ +TG G GR A RL + + D+ ++ + T ++ E
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 86 EQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKT 145
+ G + DV +RE + E+G + I+V NAGI P D
Sbjct: 71 DIG-SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDV 125
Query: 146 FDVNV 150
DVN+
Sbjct: 126 IDVNL 130
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 66.0 bits (162), Expect = 2e-14
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 43 ILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETK--QMPEEQGTRTFHTYKLDVS 100
+L+TG G+G A+ L + L + G ++ E G R D++
Sbjct: 3 VLITGATGGLGGAFARAL-KGHDLLLS------GRRAGALAELAREVGARA---LPADLA 52
Query: 101 NREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
+ E + + E G + +LV+ G + E D++ + ++L
Sbjct: 53 DELEAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLT 100
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 66.8 bits (164), Expect = 2e-14
Identities = 17/120 (14%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNET-KQMPEEQGTRTFHTY 95
++G++ ++T +G+G A L + + + + + + ++
Sbjct: 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+ ++ R+ +K R ++G ILV + G E + +++ + + W
Sbjct: 64 AGDIREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVW 122
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 66.4 bits (163), Expect = 3e-14
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 17/121 (14%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPEEQGTR 90
+L+TG GIG A+ L + + + +++ ++
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKG-----YRVGLMARDEKRLQALAAELEG----- 51
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
DV + R + + GE++ LVNNAG+ KP++E + R D N+
Sbjct: 52 -ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNL 110
Query: 151 L 151
Sbjct: 111 T 111
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 66.0 bits (162), Expect = 5e-14
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 44 LLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNRE 103
++T + + G A RL + C D K +E + E +L + +
Sbjct: 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSEQ 57
Query: 104 EVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFW 155
E + + V G+V +LV+N P +P+++ + R + + F
Sbjct: 58 EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFA 110
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 66.1 bits (162), Expect = 5e-14
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
L+ + ++TG +G+G + + L Q+ + + D+ ++ E G
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP---AGEEPAAELGAAV-RFRNA 60
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAH 153
DV+N + ++E G V LVN AG K L P D +T VN++
Sbjct: 61 DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 154 F 154
F
Sbjct: 121 F 121
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 65.4 bits (160), Expect = 5e-14
Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 33/118 (27%)
Query: 43 ILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGT-----RTFHTYKL 97
ILL G +G + +RL E++ R +
Sbjct: 6 ILLIGASGTLGSAVKERL------------------------EKKAEVITAGRHSGDVTV 41
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D++N + + ++ + +VG+V +V+ G PL E P+ T +
Sbjct: 42 DITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQIN 95
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 65.6 bits (161), Expect = 6e-14
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 42 IILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVS 100
++++TG GIG+ +A L + + + + K E + E G + T+ DVS
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA-ITFGGDVS 61
Query: 101 NREEVLRVADKVRKEVGEVTILVNNAGI 128
+V + G + ++VNNAGI
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGI 89
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 65.3 bits (160), Expect = 1e-13
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNET-KQMPEEQGTRTFHTY 95
L+G+ L+TG GIG+ +A L + + + E+ NET K++ +
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+ + V ++ +V IL+NN GI + + K F+VN+++
Sbjct: 67 VADLGTEQGC----QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVR 122
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 65.0 bits (159), Expect = 2e-13
Identities = 28/122 (22%), Positives = 42/122 (34%), Gaps = 20/122 (16%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNN--------ETKQMPEEQGTRTFH 93
+ L+TG +G GR +A+ G+ E
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAA------------GDTVIGTARRTEALDDLVAAYPDRAE 54
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAH 153
LDV++ E + VA V G V +LVNNAG E +R F+++V
Sbjct: 55 AISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGP 114
Query: 154 FW 155
Sbjct: 115 AR 116
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 64.6 bits (158), Expect = 2e-13
Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 26/144 (18%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI------DEKGNNETKQMPE 85
S ++ E ++TG IG +A RL QQ + + E
Sbjct: 3 ETSHEASECPAAVITGGARRIGHSIAVRLHQQG-----FRVVVHYRHSEGAAQRLVAELN 57
Query: 86 EQGTRTFHTYKLDVSNREEVL----RVADKVRKEVGEVTILVNNAGIMPCKPL------- 134
+ K D+S +L + D + G +LVNNA PL
Sbjct: 58 AARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTN 117
Query: 135 ----NEQKPDVIRKTFDVNVLAHF 154
+ + + F N +A
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPL 141
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 64.1 bits (157), Expect = 3e-13
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFH 93
+S +L+TG GIG +A+ G+ + F
Sbjct: 15 VPRSHMSRSVLVTGGNRGIGLAIARAFADA------------GDKVAITYRSGEPPEGFL 62
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
K D+++ E+V + ++ + G V +L+ NAG+
Sbjct: 63 AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 64.2 bits (157), Expect = 3e-13
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYK 96
S++G + ++TG +G+G A+RL Q + + D+ + ++ G
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS---GGEAQAKKLGNNC-VFAP 64
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPL---NEQKP---DVIRKTFDVNV 150
DV++ ++V + + G V + VN AGI + + + ++ DVN+
Sbjct: 65 ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 151 LAHF 154
+ F
Sbjct: 125 MGTF 128
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 64.2 bits (157), Expect = 3e-13
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 15/137 (10%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTRT 91
P +E ++TG IGR +A +L Q + + + + ++ + T
Sbjct: 16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 92 FHTYKLDVSNRE----EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR---- 143
+ D++N + + + G +LVNNA PL + +
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKT 135
Query: 144 ------KTFDVNVLAHF 154
+ N +A F
Sbjct: 136 VETQVAELIGTNAIAPF 152
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 63.7 bits (156), Expect = 3e-13
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
L G+ L+TG +GIG +A+ L + S + +E+ ++
Sbjct: 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY----TIE 65
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
+++N+EE + + + ILV NAGI
Sbjct: 66 VCNLANKEEC----SNLISKTSNLDILVCNAGI 94
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 63.3 bits (155), Expect = 5e-13
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRT 91
++ +L+TG GIG +A+RL G+ +
Sbjct: 7 EGAKPPFVSRSVLVTGGNRGIGLAIAQRLAAD------------GHKVAVTHRGSGAPKG 54
Query: 92 FHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGI 128
++DV++ + V R V + G V +LV+NAG+
Sbjct: 55 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 64.2 bits (157), Expect = 5e-13
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 35 EKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
+K L+G++ ++TG GIG +A+ + + + D+D + + + GT
Sbjct: 208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGT----A 263
Query: 95 YKLDVSNREEVLRVADKVRKEVGE-VTILVNNAGI 128
LDV+ + V ++ V + G V ILVNNAGI
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 62.4 bits (152), Expect = 2e-12
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSL-WM----CWDIDEKGNNETKQMPEEQGTRTFHTYK 96
++L+TG +GIG LA RL S + D+ +G + T +
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 150
LDV + + V ++V + G V +LV NAG+ PL D + DVNV
Sbjct: 64 LDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 60.8 bits (148), Expect = 5e-12
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDID-EKGNNETKQMPEEQGTRTFHTYK 96
EG +++G G+G +RL + D+ EKG K + +E G R
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKG----KALADELGNRA-EFVS 82
Query: 97 LDVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP----DVIRKTFDVNVL 151
+V++ + VL + + +V + G + + + KT D+ +
Sbjct: 83 TNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142
Query: 152 AHF 154
+
Sbjct: 143 GTY 145
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 59.5 bits (145), Expect = 1e-11
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKL 97
+ + ++TG +G+G KRL + + DI + + + G R
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE------DVVADLGDRA-RFAAA 59
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAH 153
DV++ V D +G + I+VN AG + L+ RK D+N++
Sbjct: 60 DVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 154 F 154
F
Sbjct: 119 F 119
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 58.5 bits (142), Expect = 3e-11
Identities = 9/124 (7%), Positives = 33/124 (26%), Gaps = 20/124 (16%)
Query: 38 LEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWD---IDEKGNNETKQMPEEQGTRTFHT 94
+ +++ G +G + + + + ID + +
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNG-----YTVLNID---------LSANDQADSNIL 46
Query: 95 YKLDVSNREEVLRVADKVRKEV--GEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVL 151
+ + E+ + ++ + +V + AG ++ +V
Sbjct: 47 VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVW 106
Query: 152 AHFW 155
+
Sbjct: 107 SSAI 110
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 58.3 bits (142), Expect = 3e-11
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 12/115 (10%)
Query: 44 LLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGN-NETKQMPEEQGTRTFHTYKLDVSNR 102
L+T + G + L Q +C D + E GT
Sbjct: 5 LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT--------IALAE 56
Query: 103 EEVLRVADKVRKEVGEVTILVNNAGI---MPCKPLNEQKPDVIRKTFDVNVLAHF 154
++ R+ D + + +V+N I M PL IR+ F+ +
Sbjct: 57 QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 58.8 bits (142), Expect = 3e-11
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 31/153 (20%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTF 92
+ ++TG GIG E+ K+L + + D +E + +
Sbjct: 5 CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENV 64
Query: 93 HTYKLDVSNREEVLR-VADKVRKEVGEVTILVNNAGIM---------------------- 129
++LDV++ + +AD ++ G++ ILVNNAG+
Sbjct: 65 VFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEE 124
Query: 130 --------PCKPLNEQKPDVIRKTFDVNVLAHF 154
+ L + ++ + +N
Sbjct: 125 LVKIYEKPEAQELMSETYELAEECLKINYNGVK 157
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 57.3 bits (139), Expect = 8e-11
Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 14/122 (11%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQKSLW--MCWDIDEKGNNETKQMPEEQGTRTFHT 94
S E +L+ G +G + + W D+ E EE
Sbjct: 4 SGEARRVLVYGGRGALGSRCVQAFRARN--WWVASIDVVE---------NEEASASVIVK 52
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDVNVLAH 153
+ + + + +V ++ AG ++ + ++
Sbjct: 53 MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112
Query: 154 FW 155
Sbjct: 113 TI 114
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 56.1 bits (136), Expect = 2e-10
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSN 101
L+TG +G+GR A L + + D+ +G + + DV+
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIY--VEGDVTR 50
Query: 102 REEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAHF 154
E+V R + +E + +V+ AG+ + K L ++ P + R+ +VN+L F
Sbjct: 51 EEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF 106
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 54.8 bits (133), Expect = 5e-10
Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
Query: 44 LLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNRE 103
L+TG GIGR +A+ L + + + E + D+ ++
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPE---------EAAQSLGAVPLPTDLE-KD 55
Query: 104 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
+ + + + +G + +LV+ A + KP E + R+ +++ F
Sbjct: 56 DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFL 107
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 54.7 bits (132), Expect = 8e-10
Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 32/151 (21%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
+ + L+TG +GR +A+ L + ++ + + N + + T
Sbjct: 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64
Query: 95 YKLDVSN-----------------REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQ 137
+ D+SN + G +LVNNA PL
Sbjct: 65 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124
Query: 138 KPD--------------VIRKTFDVNVLAHF 154
D F N +A +
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPY 155
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 54.8 bits (132), Expect = 1e-09
Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 32/151 (21%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
+ + L+TG +GR +A+ L + ++ + + N + + T
Sbjct: 42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101
Query: 95 YKLDVSN-----------------REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQ 137
+ D+SN + G +LVNNA PL
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161
Query: 138 KPD--------------VIRKTFDVNVLAHF 154
D F N +A +
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPY 192
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 52.2 bits (126), Expect = 6e-09
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 18/120 (15%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
+ + +L+ GIGR +A L Q+ + +C NE + G R
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTIC------ARNEELL--KRSGHRYV--- 64
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 155
D+ D + ++V EV ILV NAG +E + ++ D L
Sbjct: 65 VCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIK 118
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 50.8 bits (122), Expect = 2e-08
Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 26/114 (22%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSN 101
II+++G GIG K L + DI + D+S
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLST 44
Query: 102 REEVLR-VADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
E + +AD + K + LV AG+ P + V+ VN
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGAT 91
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 50.3 bits (121), Expect = 2e-08
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ--KSLWMCWDIDEKGNNETKQMPEEQGTRTFHT 94
S +++TG +G+G A+ L ++ + D KG + M +
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDT-RKGEAAARTMAGQ-----VEV 66
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+LD+ + V R AD V +L+NNAGIM P D N L HF
Sbjct: 67 RELDLQDLSSVRRFADGVSG----ADVLINNAGIMAV-PYALTV-DGFESQIGTNHLGHF 120
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 48.1 bits (115), Expect = 2e-07
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQ----------KSLWMCWDIDEKGNNETK 81
P S ++G ++++TG G GIGR A + L
Sbjct: 19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV 78
Query: 82 QMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDV 141
G +V++ ++ + + G + +LVNNAGI+ + + +
Sbjct: 79 DEITAAGGEAVADGS-NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEE 137
Query: 142 IRKTFDVNVLAHF 154
V++ HF
Sbjct: 138 FDAVIAVHLKGHF 150
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 41.6 bits (98), Expect = 3e-05
Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 13/130 (10%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRLFQQ---------KSLWMCWDIDEKGNNETKQMP 84
S + +++++TG G G+G+ + + + K +
Sbjct: 2 SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61
Query: 85 EEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRK 144
+ G D +N + ++ + K G V +++NNAGI+ + + +
Sbjct: 62 VKNGGVAV----ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKL 117
Query: 145 TFDVNVLAHF 154
DV++ F
Sbjct: 118 VIDVHLNGAF 127
Score = 38.9 bits (91), Expect = 3e-04
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRT 91
SL+ +++L+TG G G+G+E AK + + + D +T + G
Sbjct: 314 GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEA 371
Query: 92 FHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 151
+ DV+ ++ + V + G + ILVNNAGI+ + + V+++
Sbjct: 372 WPDQH-DVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428
Query: 152 AHF 154
F
Sbjct: 429 GTF 431
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 39.4 bits (92), Expect = 2e-04
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 33 PSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDI--DEKGNNETKQMPEE---- 86
+ +G + ++TG G G+GRE A ++ + + D+ G+ +++ +
Sbjct: 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71
Query: 87 ---QGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR 143
G Y V + +V+ A K G V ILVNNAGI+ + L +
Sbjct: 72 IRKAGGEAVADYN-SVIDGAKVIETA---IKAFGRVDILVNNAGILRDRSLVKTSEQDWN 127
Query: 144 KTFDVNVLAHF 154
DV++ F
Sbjct: 128 LVNDVHLKGSF 138
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 38.8 bits (91), Expect = 2e-04
Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 11/121 (9%)
Query: 42 IILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSN 101
+I +TG +GIG L + L + + D + P + +
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRE----TAVAAVLDR 58
Query: 102 REEVLRVA-----DKVRKEVGEVTILVNNAGIMPCK--PLNEQKPDVIRKTFDVNVLAHF 154
VL V + + VN G+ V +A
Sbjct: 59 CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118
Query: 155 W 155
Sbjct: 119 Q 119
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 37.7 bits (88), Expect = 6e-04
Identities = 10/57 (17%), Positives = 23/57 (40%)
Query: 98 DVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 154
+ + E ++ G + ++VNNAGI+ + + + V++ F
Sbjct: 72 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 128
Score = 32.7 bits (75), Expect = 0.034
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 34 SEKSLEGEIILLTGLGNGIGRELAKRL 60
S +G ++L+TG G G+GR A
Sbjct: 3 SPLRFDGRVVLVTGAGGGLGRAYALAF 29
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 37.2 bits (86), Expect = 0.001
Identities = 13/121 (10%), Positives = 30/121 (24%), Gaps = 13/121 (10%)
Query: 37 SLEGEIILLTGLGNGIGRELAKRLFQQ-KSLWMCWDIDEKGNNETKQMPEEQGTRTFHTY 95
S++G+ ++ +G A L + + +C +K + +
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA-- 173
Query: 96 KLDVSNREEVLRVADKVRKEVGEVTILVNN--AGIMPCKPLNEQKPDVIRKTFDVNVLAH 153
+ ++ V + G+ Q I D N
Sbjct: 174 -AETADDASRAEA-------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPP 225
Query: 154 F 154
Sbjct: 226 L 226
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.1 bits (75), Expect = 0.030
Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 48/163 (29%)
Query: 12 ILLIIKLLYSALESILLTLIPPSEK----SLEGEIILLTGLGNGIGRE-----LAKR-LF 61
+ L+ K + L+S LIP SL GE L L + + E + R +
Sbjct: 1736 LTLMEKAAFEDLKS--KGLIPADATFAGHSL-GEYAALASLADVMSIESLVEVVFYRGMT 1792
Query: 62 QQKSLWMCWDIDEKGNNETKQM---PEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGE 118
Q ++ DE G + + P ++E + V ++V K G
Sbjct: 1793 MQVAV----PRDELGRSNYGMIAINPGRVAA---------SFSQEALQYVVERVGKRTGW 1839
Query: 119 -VTILVN-N--------AG--------IMPCKPLNEQKPDVIR 143
V I VN N AG + QK D+I
Sbjct: 1840 LVEI-VNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIE 1881
Score = 32.3 bits (73), Expect = 0.056
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 32/95 (33%)
Query: 53 GRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHT-----------YK-LDVS 100
G+ +++F+ +I+E + T + + + T T ++ L
Sbjct: 1699 GKLKTEKIFK--------EINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDL--- 1747
Query: 101 NREEVLRVADKVRKEV-----GEVTILVNNAGIMP 130
+ + L AD GE L + A +M
Sbjct: 1748 -KSKGLIPADAT---FAGHSLGEYAALASLADVMS 1778
Score = 28.1 bits (62), Expect = 1.6
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 15/85 (17%)
Query: 51 GIGREL------AKRLFQQ--KSLWMC--WDIDEKGNNETKQM----PEEQGTRTFHTY- 95
G+G +L A+ ++ + + I + N + E+G R Y
Sbjct: 1630 GMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYS 1689
Query: 96 KLDVSNREEVLRVADKVRKEVGEVT 120
+ + +K+ KE+ E +
Sbjct: 1690 AMIFETIVDGKLKTEKIFKEINEHS 1714
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 32.2 bits (73), Expect = 0.060
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 37 SLEGEIILLTGLGNG-IGRELAKRLFQ 62
+ + + +L+TG G G IG E+ + L Q
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQ 499
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.4 bits (70), Expect = 0.13
Identities = 32/217 (14%), Positives = 61/217 (28%), Gaps = 87/217 (40%)
Query: 10 ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMC 69
E +L +++ L ++ + S I L + I EL +RL + K C
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSN-----IKLRI---HSIQAEL-RRLLKSKPYENC 246
Query: 70 -------WD----------------------IDEKGNNETKQMPEEQGTRTFHTYK---- 96
+ D T + + + T +
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 97 ----LDVSN---REEVLR--------VADKVRKEVG-----------EVTILVNNAGIMP 130
LD EVL +A+ +R + ++T ++ ++
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS---- 362
Query: 131 CKPLNEQKPDVIRKTF--------DVN----VLAHFW 155
LN +P RK F + +L+ W
Sbjct: 363 ---LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium
tumefa structural genomics, PSI-2, protein structure
initiative; 1.85A {Agrobacterium tumefaciens}
Length = 342
Score = 30.8 bits (70), Expect = 0.14
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 27/118 (22%)
Query: 43 ILLTGLGNG-IGRELAKRLFQQKSLWMCW-------DIDEKGNNETKQMPEEQGTRTFHT 94
I + G G +GR+L +RL + SL D+ + +
Sbjct: 17 IAIIG-AAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA-------PAGFSGAVDA 68
Query: 95 YKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 152
D+S E ++ + ++ + A I+ E D K + +N+
Sbjct: 69 RAADLSAPGEAEKLVE------ARPDVIFHLAAIV--SGEAELDFD---KGYRINLDG 115
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 29.8 bits (68), Expect = 0.28
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 38 LEGEIILLTGLGN------GIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTR 90
LEG I++ G+ N GI A+ L + L + E+ ++
Sbjct: 5 LEGRNIVVMGVANKRSIAWGI----ARSLHEAGARLIFTY-AGERLEKSVHELAGTLDRN 59
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILV 123
DV+N E+ ++++VG + +
Sbjct: 60 DSIILPCDVTNDAEIETCFASIKEQVGVIHGIA 92
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase,
epimerization, oxidoreductase; 1.88A {Streptomyces
venezuelae}
Length = 525
Score = 30.1 bits (68), Expect = 0.29
Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 17/124 (13%)
Query: 44 LLTGLGNGIGRELAKRLFQQ---------------KSLWMCWDIDEKGNNETKQMPEEQG 88
L+TG E A+RL + + ++ G + G
Sbjct: 255 LVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG 314
Query: 89 TRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDV 148
D+++ E R+ V ++ +++ + +PL D + +
Sbjct: 315 ATA-TVVTCDLTDAEAAARLLAGVSDA-HPLSAVLHLPPTVDSEPLAATDADALARVVTA 372
Query: 149 NVLA 152
A
Sbjct: 373 KATA 376
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 29.5 bits (67), Expect = 0.38
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 38 LEGEIILLTGLGN------GIGRELAKRLFQQK-SLWMCWDIDEKGNNETKQMPEEQGTR 90
LE + ++ G+ N G+ AK L Q L + E+ E +++ E+
Sbjct: 30 LENKTYVIMGIANKRSIAFGV----AKVLDQLGAKLVFTY-RKERSRKELEKLLEQLNQP 84
Query: 91 TFHTYKLDVSNREEVLRVADKVRKEVGEVTILV 123
H Y++DV + EEV+ +++ K+VG + +
Sbjct: 85 EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVY 117
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 29.3 bits (66), Expect = 0.50
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 22/85 (25%)
Query: 44 LLTGLGNGIGRELAKRLFQQKSLWMCWD-------------IDEKGNNETKQMPEEQGTR 90
L+TG +G E+A+ + + G E G
Sbjct: 534 LVTGGTGALGAEVAR--------HLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE 585
Query: 91 TFHTYKLDVSNREEVLRVADKVRKE 115
DV++RE + +V + E
Sbjct: 586 V-SLQACDVADRETLAKVLASIPDE 609
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site,
lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Length = 445
Score = 29.3 bits (66), Expect = 0.57
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 67 WMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 123
W + + ++M +E G F KL + EE+ V +R + + +
Sbjct: 188 WGAALDPDGIVAQARRMIDEYG---FSAIKLKGGVFAPEEEMAAVE-ALRAAFPDHPLRL 243
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus
halodurans}
Length = 293
Score = 28.4 bits (63), Expect = 0.88
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 20 YSALESILLTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNE 79
E ++ I ++ ++ G + + GLG +G +A++ + + +
Sbjct: 135 IPTAEGTIMMAIQHTDFTIHGANVAVLGLGR-VGMSVARKFAALGAKVKVGARES----D 189
Query: 80 TKQMPEEQGTRTFHTYKLDVSNREEVLRVAD 110
E G FH K + LR D
Sbjct: 190 LLARIAEMGMEPFHISKAA-----QELRDVD 215
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative;
1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Length = 398
Score = 28.0 bits (63), Expect = 1.3
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 70 WDIDEKGNNETKQMPEEQGTRTFHTYKLDVSN--REEVLRVADKVRKEVGEVTILV 123
D+ + ++ EE G F KL + +V + VR+ + V + V
Sbjct: 166 ADLPKAMAEHAVRVVEEGG---FDAVKLKGTTDCAGDVAILR-AVREALPGVNLRV 217
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small
metabolism, PSI-II, NYSGXRC, structural genomics, PR
structure initiative; 1.95A {Sinorhizobium meliloti}
Length = 384
Score = 28.0 bits (63), Expect = 1.5
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 82 QMPEEQGTRTFHTYKLDV--SNREEVLRVADKVRKEVGEVTILV 123
+ QG + L V + ++ A VR E+G+ + +
Sbjct: 156 AVGHAQG---ERVFYLKVGRGEKLDLEITA-AVRGEIGDARLRL 195
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein
structure initiative; 2.20A {Lactobacillus plantarum}
Length = 324
Score = 27.6 bits (62), Expect = 1.6
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 36 KSLEGEIILLTGLGNGIGRELAKRL 60
+L G+ +L+ G G IG+ LA +
Sbjct: 133 STLTGQQLLIYGTG-QIGQSLAAKA 156
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein;
structural genomics; 1.80A {Aeromonas salmonicida subsp}
Length = 324
Score = 27.7 bits (62), Expect = 1.7
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRL 60
+ L+G +L+ G G+ IG+ +A
Sbjct: 132 SHPYQGLKGRTLLILGTGS-IGQHIAHTG 159
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 27.7 bits (62), Expect = 1.7
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 35 EKSLEGEIILLTGLGNGIGRELAKRLFQQK-SLWMCWDIDEKG----NNETKQMPEEQGT 89
+ + L+ G IG+ + K +F++ DI E + +
Sbjct: 30 QSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYING 89
Query: 90 RTFHTYKLDVSNREEVLRVADKVRKEV 116
F T+ LD+ + E + + +
Sbjct: 90 D-FQTFALDIGSIEYDAFIKADGQYDY 115
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase,
magnesium binding, enzyme function initiative, enolase,
isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A
4dhg_A
Length = 441
Score = 27.4 bits (61), Expect = 2.0
Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 79 ETKQMPEEQGTRTFHTYKLDVSN---REEVLRVADKVRKEVGEVTILV 123
+ + + E G F + KL +E + +R + + +
Sbjct: 195 QARLLIGEYG---FRSIKLKGGVFPPEQEAEAIQ-ALRDAFPGLPLRL 238
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A
{Gibberella zeae}
Length = 445
Score = 27.4 bits (61), Expect = 2.1
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 79 ETKQMPEEQGTRTFHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 123
+ K++ +E G F KL +EV + + K V + +
Sbjct: 198 QAKKIIDEYG---FKAIKLKGGVFPPADEVAAIK-ALHKAFPGVPLRL 241
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center
for structural genomics of infec diseases, csgid; 2.10A
{Salmonella enterica subsp} PDB: 3kbo_A
Length = 315
Score = 27.3 bits (61), Expect = 2.3
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 32 PPSEKSLEGEIILLTGLGNGIGRELAKRL 60
P E + E + + G G +G ++A+ L
Sbjct: 131 PLPEYTREEFSVGIMGAGV-LGAKVAESL 158
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 27.2 bits (61), Expect = 2.4
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
DV + +E+ + ++ K + +V
Sbjct: 79 VLPCDVISDQEIKDLFVELGKVWDGLDAIV 108
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 27.0 bits (59), Expect = 2.6
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 9/88 (10%)
Query: 44 LLTGLGNG-IGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNR 102
L+ G G IG LA+ L + W + E+ D+S+
Sbjct: 5 LIVG-VTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQ---CDISDP 60
Query: 103 EEVLRVADKVRKEVGEVTILVNNAGIMP 130
++ + +VT +
Sbjct: 61 DDSQAKLSPLT----DVTHVFYVTWANR 84
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase
superfamily fold, D-glucarate dehydratase, D-glucara
isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes}
PDB: 3n6j_A 3n6h_A*
Length = 455
Score = 27.1 bits (60), Expect = 2.7
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 79 ETKQMPEEQGTRTFHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 123
+ G F +KL +E+ V +++K + I +
Sbjct: 192 LAAASKDRYG---FKDFKLKGGVFEGSKEIDTVI-ELKKHFPDARITL 235
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid
biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 26.8 bits (60), Expect = 3.5
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
++ DV+ EE+ + V++ G + LV
Sbjct: 62 LFRADVTQDEELDALFAGVKEAFGGLDYLV 91
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 26.4 bits (59), Expect = 3.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
Y+LDVS E + + V+K++G + +V
Sbjct: 60 VYELDVSKEEHFKSLYNSVKKDLGSLDFIV 89
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A {Burkholderia
pseudomallei 1710B}
Length = 271
Score = 26.4 bits (59), Expect = 3.9
Identities = 4/30 (13%), Positives = 13/30 (43%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
+ DV++ ++ + ++ + LV
Sbjct: 68 VFPCDVADDAQIDALFASLKTHWDSLDGLV 97
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 26.4 bits (59), Expect = 4.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
K DVS E++ + + + G + I+V
Sbjct: 75 VVKCDVSLDEDIKNLKKFLEENWGSLDIIV 104
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse,
oxidoreductase; 2.10A {Chromohalobacter salexigens}
Length = 267
Score = 26.5 bits (59), Expect = 4.1
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 10/70 (14%)
Query: 43 ILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNR 102
+L+TG G+G + L DI + G E D+++
Sbjct: 5 LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE----------AHEEIVACDLADA 54
Query: 103 EEVLRVADKV 112
+ V +
Sbjct: 55 QAVHDLVKDC 64
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein
structure initiative, PS nysgrc; 1.85A {Chromohalobacter
salexigens} PDB: 3nfu_A
Length = 450
Score = 26.4 bits (58), Expect = 4.3
Identities = 8/48 (16%), Positives = 15/48 (31%), Gaps = 5/48 (10%)
Query: 78 NETKQMPEEQGTRTFHTYKLDVSNR--EEVLRVADKVRKEVGEVTILV 123
N + + G F +KL EE + + E + +
Sbjct: 188 NLARAAYDRYG---FKDFKLKGGVLRGEEEADCIRALHEAFPEARLAL 232
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A*
1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A*
1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 26.4 bits (59), Expect = 4.7
Identities = 4/30 (13%), Positives = 11/30 (36%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
+ DV+ + + ++ K + V
Sbjct: 63 VLQCDVAEDASIDTMFAELGKVWPKFDGFV 92
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 26.4 bits (59), Expect = 4.7
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
DV++ + V + + K+ G++ LV
Sbjct: 85 AGHCDVADAASIDAVFETLEKKWGKLDFLV 114
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 26.1 bits (58), Expect = 4.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 94 TYKLDVSNREEVLRVADKVRKEVGEVTILV 123
T DVS+ E V + + +E G + +V
Sbjct: 84 TVPCDVSDAESVDNMFKVLAEEWGSLDFVV 113
>1im4_A DBH; DNA polymerase PALM, thumb, fingers, helix-hairpin-helix,
fidelity, processivity, transferase; 2.30A {Sulfolobus
solfataricus} SCOP: e.8.1.7
Length = 221
Score = 25.9 bits (58), Expect = 5.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 97 LDVSNREEVL-----RVADKVRKEVGEVTILVNNAGIMPCKPL-----NEQKPD---VIR 143
LDV+N+ E +A K+++E+ E + G+ P K L ++ KP+ VIR
Sbjct: 114 LDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIR 173
Query: 144 K 144
Sbjct: 174 P 174
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain,
orotidine 5'-monophosphate decarboxylase, human,
5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens}
PDB: 3bvj_A* 3mw7_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Length = 312
Score = 26.1 bits (57), Expect = 5.3
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 97 LDVSNREEVLRVADKVRKEVGEVTI 121
DVS E+L++AD + + +
Sbjct: 90 ADVSLARELLQLADALGPSICMLKT 114
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel,
unusual catalysis, disease mutati glycosyltransferase,
lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo
sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A*
3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A*
3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A*
3l0n_A* ...
Length = 260
Score = 26.1 bits (57), Expect = 5.7
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 97 LDVSNREEVLRVADKVRKEVGEVTI 121
DVS E+L++AD + + +
Sbjct: 38 ADVSLARELLQLADALGPSICMLKT 62
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural
genomics, lyase; 1.70A {Actinobacillus succinogenes}
PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A*
1jct_A* 3pwg_A* 1bqg_A
Length = 464
Score = 25.9 bits (57), Expect = 6.2
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 79 ETKQMPEEQGTRTFHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 123
+ E+ G F+ +KL EE V + K + I +
Sbjct: 209 LAEAAYEKYG---FNDFKLKGGVLDGFEEAEAVT-ALAKRFPDARITL 252
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid
dehydrogenase, cofactor regenerator, yeast, CBFDH; HET:
PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Length = 364
Score = 25.7 bits (57), Expect = 6.4
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 38 LEGEIILLTGLGNGIGRELAKRL 60
+EG+ I G G IG + +RL
Sbjct: 162 IEGKTIATIGAGR-IGYRVLERL 183
>1wju_A NEDD8 ultimate buster-1; ubiquitin-like domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: d.15.1.1
Length = 100
Score = 24.6 bits (53), Expect = 8.2
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 11/75 (14%)
Query: 75 KGNNETKQ-----------MPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILV 123
+ + ++ + +L ++ RE ++A+ + + I++
Sbjct: 5 SSGDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIVI 64
Query: 124 NNAGIMPCKPLNEQK 138
N + K L EQ
Sbjct: 65 NKKQLQLGKTLEEQG 79
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.137 0.396
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,249,845
Number of extensions: 130272
Number of successful extensions: 803
Number of sequences better than 10.0: 1
Number of HSP's gapped: 607
Number of HSP's successfully gapped: 268
Length of query: 155
Length of database: 6,701,793
Length adjustment: 86
Effective length of query: 69
Effective length of database: 4,300,587
Effective search space: 296740503
Effective search space used: 296740503
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.4 bits)