Diaphorina citri psyllid: psy2038


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHcccccc
*TALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW
xxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGLGNGIGRELAKRLFQQKSLWMCWDIDEKGNNETKQMPEEQGTRTFHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016020 [CC]membraneprobableGO:0005575
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0042574 [BP]retinal metabolic processprobableGO:0044238, GO:0044710, GO:0006081, GO:0006721, GO:0006720, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0016101, GO:0044255, GO:0001523, GO:0006629
GO:0016616 [MF]oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorprobableGO:0003824, GO:0003674, GO:0016614, GO:0016491

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YB1, chain A
Confidence level:very confident
Coverage over the Query: 34-154
View the alignment between query and template
View the model in PyMOL