Query psy2040
Match_columns 159
No_of_seqs 263 out of 2243
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 22:44:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2040.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2040hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1201|consensus 99.5 1.7E-13 3.7E-18 112.7 11.8 89 69-159 6-94 (300)
2 KOG1014|consensus 99.3 1.4E-11 3E-16 101.9 10.6 61 98-159 46-107 (312)
3 COG0300 DltE Short-chain dehyd 99.3 6E-12 1.3E-16 102.7 7.6 62 97-159 2-64 (265)
4 PLN02780 ketoreductase/ oxidor 99.2 1.3E-10 2.9E-15 96.7 11.2 59 100-159 52-112 (320)
5 KOG1205|consensus 99.1 7.5E-11 1.6E-15 97.0 6.2 66 94-159 5-71 (282)
6 COG4221 Short-chain alcohol de 99.1 9.5E-11 2.1E-15 94.2 6.6 60 97-159 2-61 (246)
7 PRK08862 short chain dehydroge 99.1 3.3E-10 7.1E-15 89.7 7.6 61 98-159 2-62 (227)
8 PRK07478 short chain dehydroge 99.1 4.4E-10 9.5E-15 89.2 8.0 62 97-159 2-63 (254)
9 PRK05876 short chain dehydroge 99.1 3.8E-10 8.2E-15 91.5 7.8 63 96-159 1-63 (275)
10 PRK05854 short chain dehydroge 99.1 4.5E-10 9.8E-15 92.8 7.8 64 95-159 8-73 (313)
11 PRK05867 short chain dehydroge 99.1 4.8E-10 1E-14 89.1 7.7 62 97-159 5-66 (253)
12 PRK08303 short chain dehydroge 99.1 6.7E-10 1.4E-14 91.8 8.5 63 96-159 3-75 (305)
13 KOG0725|consensus 99.1 6.9E-10 1.5E-14 90.8 8.2 63 96-159 3-68 (270)
14 PRK08339 short chain dehydroge 99.0 6.4E-10 1.4E-14 89.4 7.7 61 98-159 5-66 (263)
15 PRK08589 short chain dehydroge 99.0 7.3E-10 1.6E-14 89.3 7.8 61 97-159 2-62 (272)
16 PRK06139 short chain dehydroge 99.0 7.9E-10 1.7E-14 92.5 7.3 62 97-159 3-64 (330)
17 KOG1208|consensus 99.0 1.2E-09 2.6E-14 91.3 8.0 64 95-159 29-94 (314)
18 PRK07063 short chain dehydroge 99.0 1.2E-09 2.7E-14 86.9 7.8 62 97-159 3-66 (260)
19 PRK05866 short chain dehydroge 99.0 1.4E-09 3.1E-14 89.1 8.0 63 96-159 35-97 (293)
20 PRK06194 hypothetical protein; 99.0 1.5E-09 3.2E-14 87.6 7.9 62 97-159 2-63 (287)
21 PRK06114 short chain dehydroge 99.0 2.1E-09 4.6E-14 85.5 8.6 64 95-159 2-66 (254)
22 PRK07523 gluconate 5-dehydroge 99.0 1.9E-09 4.1E-14 85.6 7.9 63 96-159 5-67 (255)
23 PRK07791 short chain dehydroge 99.0 2.1E-09 4.6E-14 87.6 8.1 62 97-159 2-72 (286)
24 PRK07035 short chain dehydroge 99.0 2.3E-09 5E-14 84.8 7.9 62 97-159 4-65 (252)
25 PRK08085 gluconate 5-dehydroge 99.0 2.3E-09 5E-14 85.1 7.9 62 97-159 5-66 (254)
26 PRK07109 short chain dehydroge 99.0 2.1E-09 4.5E-14 89.9 7.6 62 97-159 4-65 (334)
27 PRK07062 short chain dehydroge 98.9 2.6E-09 5.6E-14 85.3 7.6 62 97-159 4-67 (265)
28 PRK08277 D-mannonate oxidoredu 98.9 3E-09 6.5E-14 85.5 7.9 62 97-159 6-67 (278)
29 PRK08265 short chain dehydroge 98.9 3.1E-09 6.7E-14 85.1 7.5 60 96-159 1-60 (261)
30 PRK06197 short chain dehydroge 98.9 3.7E-09 8E-14 86.6 8.0 64 95-159 10-75 (306)
31 PRK06124 gluconate 5-dehydroge 98.9 4.1E-09 8.9E-14 83.6 7.9 63 96-159 6-68 (256)
32 PRK07890 short chain dehydroge 98.9 4.4E-09 9.5E-14 83.3 7.8 60 99-159 3-62 (258)
33 PRK06720 hypothetical protein; 98.9 4.9E-09 1.1E-13 80.2 7.8 62 97-159 12-73 (169)
34 PRK07097 gluconate 5-dehydroge 98.9 5.4E-09 1.2E-13 83.6 8.3 63 96-159 5-67 (265)
35 PRK06172 short chain dehydroge 98.9 5E-09 1.1E-13 83.0 7.9 62 97-159 3-64 (253)
36 PRK13394 3-hydroxybutyrate deh 98.9 4.9E-09 1.1E-13 83.0 7.9 62 97-159 3-64 (262)
37 PRK07453 protochlorophyllide o 98.9 3.4E-09 7.4E-14 87.4 7.2 62 97-159 2-63 (322)
38 PRK07984 enoyl-(acyl carrier p 98.9 5.4E-09 1.2E-13 84.4 8.0 60 98-159 3-64 (262)
39 PRK06935 2-deoxy-D-gluconate 3 98.9 6.4E-09 1.4E-13 82.8 8.2 62 96-159 10-71 (258)
40 PRK07774 short chain dehydroge 98.9 6.3E-09 1.4E-13 82.0 7.9 63 96-159 1-63 (250)
41 PRK08278 short chain dehydroge 98.9 7.2E-09 1.6E-13 83.7 8.4 62 97-159 2-70 (273)
42 PRK08416 7-alpha-hydroxysteroi 98.9 5.6E-09 1.2E-13 83.4 7.6 63 96-159 3-67 (260)
43 PRK05872 short chain dehydroge 98.9 4.4E-09 9.6E-14 86.0 7.1 63 95-159 3-65 (296)
44 PRK12481 2-deoxy-D-gluconate 3 98.9 7.3E-09 1.6E-13 82.6 7.7 60 97-159 4-63 (251)
45 PRK08690 enoyl-(acyl carrier p 98.9 7.9E-09 1.7E-13 83.0 7.9 62 96-159 1-64 (261)
46 PRK07576 short chain dehydroge 98.9 7.2E-09 1.6E-13 83.2 7.6 63 96-159 4-66 (264)
47 PRK07792 fabG 3-ketoacyl-(acyl 98.9 9.8E-09 2.1E-13 84.5 8.5 63 96-159 7-70 (306)
48 PRK08628 short chain dehydroge 98.9 9.6E-09 2.1E-13 81.5 7.8 61 97-159 3-63 (258)
49 PRK07370 enoyl-(acyl carrier p 98.9 1.1E-08 2.4E-13 82.0 8.2 62 97-159 2-67 (258)
50 PRK08703 short chain dehydroge 98.9 8.9E-09 1.9E-13 81.0 7.5 63 96-159 1-64 (239)
51 PRK12939 short chain dehydroge 98.9 1.1E-08 2.3E-13 80.4 7.9 62 97-159 3-64 (250)
52 PRK07814 short chain dehydroge 98.8 9.5E-09 2.1E-13 82.2 7.6 61 98-159 7-67 (263)
53 PRK07904 short chain dehydroge 98.8 9.6E-09 2.1E-13 82.2 7.6 59 100-159 7-68 (253)
54 PRK08643 acetoin reductase; Va 98.8 1.1E-08 2.4E-13 81.1 7.7 58 101-159 2-59 (256)
55 PRK09242 tropinone reductase; 98.8 1.1E-08 2.4E-13 81.2 7.5 62 97-159 5-68 (257)
56 PRK07666 fabG 3-ketoacyl-(acyl 98.8 1.3E-08 2.8E-13 79.9 7.8 62 97-159 3-64 (239)
57 PRK12429 3-hydroxybutyrate deh 98.8 1.3E-08 2.9E-13 80.2 7.7 60 99-159 2-61 (258)
58 PRK12823 benD 1,6-dihydroxycyc 98.8 1.4E-08 3E-13 80.7 7.9 60 98-159 5-64 (260)
59 PRK06113 7-alpha-hydroxysteroi 98.8 1.6E-08 3.5E-13 80.4 7.9 61 98-159 8-68 (255)
60 PRK07533 enoyl-(acyl carrier p 98.8 1.6E-08 3.4E-13 81.1 7.8 62 96-159 5-68 (258)
61 PRK07677 short chain dehydroge 98.8 1.4E-08 3.1E-13 80.5 7.4 58 101-159 1-58 (252)
62 PLN02253 xanthoxin dehydrogena 98.8 1.2E-08 2.5E-13 82.2 6.9 62 96-159 13-74 (280)
63 PRK12747 short chain dehydroge 98.8 1.6E-08 3.4E-13 80.2 7.6 60 99-159 2-62 (252)
64 PRK06200 2,3-dihydroxy-2,3-dih 98.8 1.3E-08 2.8E-13 81.3 7.1 59 97-159 2-60 (263)
65 PRK06949 short chain dehydroge 98.8 1.7E-08 3.7E-13 79.9 7.6 62 97-159 5-66 (258)
66 PRK08226 short chain dehydroge 98.8 2E-08 4.4E-13 79.9 8.1 61 97-159 2-62 (263)
67 PRK08594 enoyl-(acyl carrier p 98.8 2.4E-08 5.1E-13 80.1 8.3 60 97-159 3-67 (257)
68 PRK07806 short chain dehydroge 98.8 2.8E-08 6.1E-13 78.3 8.6 62 97-159 2-64 (248)
69 TIGR01289 LPOR light-dependent 98.8 1.3E-08 2.9E-13 84.1 6.9 59 100-159 2-61 (314)
70 PRK09072 short chain dehydroge 98.8 1.8E-08 3.8E-13 80.4 7.4 60 98-159 2-61 (263)
71 PRK12826 3-ketoacyl-(acyl-carr 98.8 2.3E-08 5.1E-13 78.4 7.9 61 98-159 3-63 (251)
72 PRK06128 oxidoreductase; Provi 98.8 2.7E-08 5.9E-13 81.4 8.6 63 96-159 50-114 (300)
73 PRK06125 short chain dehydroge 98.8 2.2E-08 4.8E-13 79.7 7.8 61 98-159 4-65 (259)
74 PRK08217 fabG 3-ketoacyl-(acyl 98.8 2.3E-08 4.9E-13 78.6 7.6 61 98-159 2-62 (253)
75 PRK08213 gluconate 5-dehydroge 98.8 2E-08 4.3E-13 79.9 7.4 61 98-159 9-69 (259)
76 PRK06138 short chain dehydroge 98.8 2.3E-08 4.9E-13 78.8 7.6 60 98-159 2-61 (252)
77 PRK05717 oxidoreductase; Valid 98.8 2.4E-08 5.2E-13 79.4 7.8 61 95-159 4-64 (255)
78 PF00106 adh_short: short chai 98.8 1.1E-08 2.3E-13 76.0 5.4 57 102-159 1-60 (167)
79 TIGR01832 kduD 2-deoxy-D-gluco 98.8 3.2E-08 7E-13 78.0 8.3 59 98-159 2-60 (248)
80 PRK05599 hypothetical protein; 98.8 1.7E-08 3.6E-13 80.4 6.6 57 102-159 1-57 (246)
81 PRK06603 enoyl-(acyl carrier p 98.8 2.9E-08 6.2E-13 79.7 8.0 60 98-159 5-66 (260)
82 PRK06079 enoyl-(acyl carrier p 98.8 2.2E-08 4.7E-13 80.0 7.3 58 98-159 4-63 (252)
83 PRK12746 short chain dehydroge 98.8 2.9E-08 6.2E-13 78.5 7.9 63 96-159 1-64 (254)
84 TIGR03325 BphB_TodD cis-2,3-di 98.8 2E-08 4.3E-13 80.2 6.9 58 98-159 2-59 (262)
85 PRK07231 fabG 3-ketoacyl-(acyl 98.8 2.7E-08 5.9E-13 78.1 7.6 60 98-159 2-61 (251)
86 PRK07985 oxidoreductase; Provi 98.8 3.7E-08 8E-13 80.6 8.5 63 96-159 44-108 (294)
87 PRK08063 enoyl-(acyl carrier p 98.8 2.7E-08 5.8E-13 78.4 7.4 60 99-159 2-62 (250)
88 PRK07067 sorbitol dehydrogenas 98.8 3E-08 6.5E-13 78.8 7.6 59 97-159 2-60 (257)
89 PRK07454 short chain dehydroge 98.7 3.5E-08 7.6E-13 77.5 7.7 59 100-159 5-63 (241)
90 PRK07024 short chain dehydroge 98.7 1.7E-08 3.6E-13 80.4 5.9 57 101-159 2-58 (257)
91 PRK08251 short chain dehydroge 98.7 2.9E-08 6.2E-13 78.2 7.2 58 101-159 2-61 (248)
92 PRK08936 glucose-1-dehydrogena 98.7 3.3E-08 7.2E-13 78.8 7.6 61 98-159 4-65 (261)
93 PRK06500 short chain dehydroge 98.7 3.2E-08 7E-13 77.7 7.4 58 98-159 3-60 (249)
94 PRK06505 enoyl-(acyl carrier p 98.7 3.9E-08 8.4E-13 79.7 7.6 59 99-159 5-65 (271)
95 PRK07825 short chain dehydroge 98.7 2.5E-08 5.5E-13 79.9 6.5 57 98-159 2-58 (273)
96 PRK08340 glucose-1-dehydrogena 98.7 2.7E-08 5.8E-13 79.3 6.6 55 103-159 2-56 (259)
97 PRK12859 3-ketoacyl-(acyl-carr 98.7 4.6E-08 1E-12 78.0 7.9 63 96-159 1-76 (256)
98 PRK09186 flagellin modificatio 98.7 4.5E-08 9.8E-13 77.3 7.6 61 99-159 2-63 (256)
99 PRK05653 fabG 3-ketoacyl-(acyl 98.7 5.5E-08 1.2E-12 75.8 7.9 61 98-159 2-62 (246)
100 PRK06701 short chain dehydroge 98.7 5.7E-08 1.2E-12 79.4 8.3 64 95-159 40-104 (290)
101 PRK05855 short chain dehydroge 98.7 3.8E-08 8.3E-13 86.0 7.6 62 97-159 311-372 (582)
102 TIGR03206 benzo_BadH 2-hydroxy 98.7 4.9E-08 1.1E-12 76.8 7.5 60 99-159 1-60 (250)
103 PRK07201 short chain dehydroge 98.7 4E-08 8.7E-13 88.0 7.7 62 97-159 367-428 (657)
104 PRK07326 short chain dehydroge 98.7 5.6E-08 1.2E-12 76.0 7.6 60 98-159 3-62 (237)
105 PLN02730 enoyl-[acyl-carrier-p 98.7 3.8E-08 8.3E-13 81.8 7.0 50 97-147 5-56 (303)
106 PRK08993 2-deoxy-D-gluconate 3 98.7 7.8E-08 1.7E-12 76.5 8.5 60 97-159 6-65 (253)
107 PRK05650 short chain dehydroge 98.7 5E-08 1.1E-12 78.2 7.3 57 102-159 1-57 (270)
108 PRK12743 oxidoreductase; Provi 98.7 5.7E-08 1.2E-12 77.3 7.6 59 100-159 1-60 (256)
109 PRK06198 short chain dehydroge 98.7 5.6E-08 1.2E-12 77.1 7.5 62 97-159 2-64 (260)
110 PRK07775 short chain dehydroge 98.7 7.3E-08 1.6E-12 77.7 8.3 61 98-159 7-67 (274)
111 PRK09134 short chain dehydroge 98.7 7.4E-08 1.6E-12 76.6 8.2 63 96-159 4-67 (258)
112 PRK07889 enoyl-(acyl carrier p 98.7 3.2E-08 7E-13 79.2 6.1 59 97-159 3-65 (256)
113 COG3967 DltE Short-chain dehyd 98.7 2.3E-08 5E-13 79.0 5.1 48 98-145 2-49 (245)
114 PRK12935 acetoacetyl-CoA reduc 98.7 6.9E-08 1.5E-12 76.0 7.8 62 97-159 2-64 (247)
115 PRK07831 short chain dehydroge 98.7 8.6E-08 1.9E-12 76.4 8.3 62 97-159 13-77 (262)
116 PRK07102 short chain dehydroge 98.7 5.5E-08 1.2E-12 76.6 7.0 57 102-159 2-59 (243)
117 PRK12938 acetyacetyl-CoA reduc 98.7 7.1E-08 1.5E-12 75.9 7.6 60 99-159 1-61 (246)
118 PRK06196 oxidoreductase; Provi 98.7 4.8E-08 1E-12 80.5 6.7 48 98-145 23-70 (315)
119 PRK08415 enoyl-(acyl carrier p 98.7 7.3E-08 1.6E-12 78.3 7.7 59 98-159 2-63 (274)
120 PRK06914 short chain dehydroge 98.7 7.6E-08 1.7E-12 77.3 7.5 59 100-159 2-62 (280)
121 PRK05565 fabG 3-ketoacyl-(acyl 98.7 9.6E-08 2.1E-12 74.7 7.8 61 98-159 2-63 (247)
122 KOG1200|consensus 98.7 3.1E-08 6.8E-13 77.9 4.9 60 98-159 11-70 (256)
123 PRK08159 enoyl-(acyl carrier p 98.7 8.4E-08 1.8E-12 77.7 7.6 60 98-159 7-68 (272)
124 PRK08945 putative oxoacyl-(acy 98.7 8.6E-08 1.9E-12 75.7 7.4 64 96-159 7-70 (247)
125 TIGR01500 sepiapter_red sepiap 98.7 7E-08 1.5E-12 76.9 6.9 56 103-159 2-63 (256)
126 PRK06940 short chain dehydroge 98.6 7.3E-08 1.6E-12 78.0 6.9 56 101-159 2-57 (275)
127 PRK12937 short chain dehydroge 98.6 1.1E-07 2.4E-12 74.5 7.7 61 98-159 2-63 (245)
128 PRK12384 sorbitol-6-phosphate 98.6 9.6E-08 2.1E-12 75.8 7.4 58 101-159 2-61 (259)
129 PRK07856 short chain dehydroge 98.6 9.2E-08 2E-12 75.8 6.7 40 97-136 2-41 (252)
130 PRK12828 short chain dehydroge 98.6 1.4E-07 3E-12 73.3 7.4 53 97-149 3-55 (239)
131 PRK12744 short chain dehydroge 98.6 1.6E-07 3.5E-12 74.6 7.9 61 98-159 5-69 (257)
132 PRK05786 fabG 3-ketoacyl-(acyl 98.6 1.7E-07 3.6E-12 73.3 7.6 60 98-159 2-61 (238)
133 PRK12827 short chain dehydroge 98.6 1.7E-07 3.7E-12 73.4 7.6 62 97-159 2-67 (249)
134 PRK09291 short chain dehydroge 98.6 1.2E-07 2.7E-12 74.9 6.8 58 101-159 2-59 (257)
135 PRK06181 short chain dehydroge 98.6 1.4E-07 3E-12 75.0 7.1 58 101-159 1-58 (263)
136 TIGR01963 PHB_DH 3-hydroxybuty 98.6 1.6E-07 3.4E-12 74.0 7.3 58 101-159 1-58 (255)
137 TIGR02415 23BDH acetoin reduct 98.6 1.6E-07 3.4E-12 74.1 7.2 57 102-159 1-57 (254)
138 PRK12748 3-ketoacyl-(acyl-carr 98.6 2.2E-07 4.9E-12 73.8 8.1 61 98-159 2-75 (256)
139 PRK06997 enoyl-(acyl carrier p 98.6 1.8E-07 3.9E-12 75.2 7.5 38 97-134 2-41 (260)
140 PRK05875 short chain dehydroge 98.6 1.8E-07 3.9E-12 75.0 7.4 61 98-159 4-66 (276)
141 PRK09135 pteridine reductase; 98.6 2.4E-07 5.1E-12 72.6 7.9 61 98-159 3-65 (249)
142 PRK08267 short chain dehydroge 98.6 1.2E-07 2.6E-12 75.4 6.3 55 102-159 2-56 (260)
143 PRK07832 short chain dehydroge 98.6 1.4E-07 3.1E-12 75.8 6.6 58 102-159 1-58 (272)
144 TIGR02632 RhaD_aldol-ADH rhamn 98.6 2.4E-07 5.2E-12 84.4 8.9 106 51-159 362-473 (676)
145 PRK12936 3-ketoacyl-(acyl-carr 98.6 2.4E-07 5.3E-12 72.5 7.6 60 96-159 1-60 (245)
146 PRK06484 short chain dehydroge 98.6 1.6E-07 3.4E-12 82.2 7.1 57 99-159 3-59 (520)
147 PRK06123 short chain dehydroge 98.6 2.3E-07 4.9E-12 73.0 7.2 58 101-159 2-60 (248)
148 PRK06947 glucose-1-dehydrogena 98.6 2.6E-07 5.7E-12 72.8 7.6 58 101-159 2-60 (248)
149 PRK06077 fabG 3-ketoacyl-(acyl 98.6 3.2E-07 6.9E-12 72.2 8.0 62 97-159 2-64 (252)
150 PRK12745 3-ketoacyl-(acyl-carr 98.5 2.8E-07 6E-12 72.8 7.5 58 101-159 2-60 (256)
151 PRK06101 short chain dehydroge 98.5 1.4E-07 3.1E-12 74.5 5.8 53 102-159 2-54 (240)
152 PRK05557 fabG 3-ketoacyl-(acyl 98.5 4.1E-07 9E-12 70.9 8.1 61 98-159 2-63 (248)
153 PRK06484 short chain dehydroge 98.5 1.9E-07 4.2E-12 81.6 6.8 57 99-159 267-323 (520)
154 PRK12829 short chain dehydroge 98.5 2.7E-07 5.9E-12 73.1 7.1 60 97-159 7-66 (264)
155 PRK07074 short chain dehydroge 98.5 2.7E-07 5.9E-12 73.1 7.1 56 101-159 2-57 (257)
156 PRK06057 short chain dehydroge 98.5 2.3E-07 4.9E-12 73.7 6.4 48 98-145 4-51 (255)
157 TIGR01829 AcAcCoA_reduct aceto 98.5 3.7E-07 8E-12 71.3 7.2 57 102-159 1-58 (242)
158 TIGR02685 pter_reduc_Leis pter 98.5 3.8E-07 8.3E-12 73.1 7.3 57 102-159 2-60 (267)
159 PRK12742 oxidoreductase; Provi 98.5 3.8E-07 8.2E-12 71.3 7.0 45 97-141 2-47 (237)
160 PRK06841 short chain dehydroge 98.5 5.3E-07 1.1E-11 71.3 7.7 59 97-159 11-69 (255)
161 PRK08264 short chain dehydroge 98.5 3.3E-07 7.2E-12 71.7 6.4 43 97-139 2-45 (238)
162 PRK08642 fabG 3-ketoacyl-(acyl 98.5 5.3E-07 1.2E-11 71.0 7.4 58 98-159 2-60 (253)
163 PRK09730 putative NAD(P)-bindi 98.5 4.9E-07 1.1E-11 70.8 7.2 57 102-159 2-59 (247)
164 PLN00015 protochlorophyllide r 98.5 2.1E-07 4.6E-12 76.6 5.2 54 105-159 1-55 (308)
165 PRK06523 short chain dehydroge 98.5 5.2E-07 1.1E-11 71.6 7.0 39 97-135 5-43 (260)
166 COG1028 FabG Dehydrogenases wi 98.5 8.5E-07 1.8E-11 69.9 8.0 61 98-159 2-65 (251)
167 PRK12825 fabG 3-ketoacyl-(acyl 98.4 8.1E-07 1.7E-11 69.2 7.8 62 97-159 2-64 (249)
168 PRK06182 short chain dehydroge 98.4 3.8E-07 8.2E-12 73.2 5.8 42 100-141 2-43 (273)
169 TIGR01831 fabG_rel 3-oxoacyl-( 98.4 5.2E-07 1.1E-11 70.7 6.5 55 104-159 1-56 (239)
170 KOG4169|consensus 98.4 4.7E-07 1E-11 72.6 6.2 60 98-159 2-63 (261)
171 PRK05993 short chain dehydroge 98.4 4E-07 8.8E-12 73.5 5.8 42 100-141 3-44 (277)
172 PRK08263 short chain dehydroge 98.4 5.7E-07 1.2E-11 72.4 6.7 56 100-159 2-57 (275)
173 PRK06180 short chain dehydroge 98.4 6E-07 1.3E-11 72.4 6.7 56 100-159 3-58 (277)
174 PRK06924 short chain dehydroge 98.4 7.3E-07 1.6E-11 70.3 6.9 54 102-159 2-56 (251)
175 PRK06483 dihydromonapterin red 98.4 7.6E-07 1.6E-11 69.8 6.9 37 101-137 2-38 (236)
176 PRK06398 aldose dehydrogenase; 98.4 4.5E-07 9.9E-12 72.5 5.4 39 97-135 2-40 (258)
177 KOG1199|consensus 98.4 9.8E-07 2.1E-11 68.5 6.6 58 98-159 6-63 (260)
178 PRK06463 fabG 3-ketoacyl-(acyl 98.4 1.4E-06 3E-11 69.2 7.6 38 98-135 4-41 (255)
179 PRK10538 malonic semialdehyde 98.4 9.7E-07 2.1E-11 69.9 6.6 54 102-159 1-54 (248)
180 PRK06171 sorbitol-6-phosphate 98.4 9.5E-07 2.1E-11 70.4 6.5 39 98-136 6-44 (266)
181 PRK08324 short chain dehydroge 98.4 1.1E-06 2.3E-11 80.2 7.3 62 96-159 417-478 (681)
182 PRK07060 short chain dehydroge 98.4 1.2E-06 2.7E-11 68.6 6.8 47 97-143 5-51 (245)
183 PRK07041 short chain dehydroge 98.3 8.6E-07 1.9E-11 69.0 5.5 53 105-159 1-53 (230)
184 PLN03209 translocon at the inn 98.3 1.6E-06 3.4E-11 77.7 7.5 53 95-147 74-126 (576)
185 PRK12367 short chain dehydroge 98.3 9.9E-07 2.2E-11 70.8 5.4 39 97-135 10-48 (245)
186 PRK12824 acetoacetyl-CoA reduc 98.3 2E-06 4.4E-11 67.2 6.9 57 102-159 3-60 (245)
187 PRK08220 2,3-dihydroxybenzoate 98.3 2E-06 4.4E-11 67.7 6.9 39 97-135 4-42 (252)
188 PRK06482 short chain dehydroge 98.3 1.8E-06 4E-11 69.2 6.5 55 101-159 2-56 (276)
189 KOG1210|consensus 98.3 5.5E-06 1.2E-10 69.1 9.0 58 102-159 34-92 (331)
190 PRK07069 short chain dehydroge 98.3 2.7E-06 5.9E-11 66.8 7.0 56 104-159 2-59 (251)
191 PRK06300 enoyl-(acyl carrier p 98.3 1.5E-06 3.2E-11 72.1 5.7 38 97-134 4-43 (299)
192 PRK06550 fabG 3-ketoacyl-(acyl 98.3 2.2E-06 4.9E-11 66.9 6.4 39 98-136 2-40 (235)
193 PRK07424 bifunctional sterol d 98.3 3E-06 6.4E-11 73.2 7.4 41 99-139 176-216 (406)
194 PRK06179 short chain dehydroge 98.2 1.4E-06 3.1E-11 69.6 4.9 37 100-136 3-39 (270)
195 TIGR01830 3oxo_ACP_reduc 3-oxo 98.2 3.5E-06 7.7E-11 65.5 6.7 55 104-159 1-56 (239)
196 PRK08177 short chain dehydroge 98.2 3.5E-06 7.6E-11 65.8 6.3 39 102-140 2-40 (225)
197 smart00822 PKS_KR This enzymat 98.2 4.5E-06 9.7E-11 61.1 6.5 57 102-159 1-61 (180)
198 KOG1207|consensus 98.2 3.1E-06 6.8E-11 65.8 5.4 49 97-145 3-51 (245)
199 PRK07023 short chain dehydroge 98.2 4.3E-06 9.4E-11 65.8 6.4 51 103-159 3-53 (243)
200 PLN02989 cinnamyl-alcohol dehy 98.2 5.4E-06 1.2E-10 68.1 7.1 59 100-159 4-64 (325)
201 PLN02583 cinnamoyl-CoA reducta 98.2 5.9E-06 1.3E-10 67.7 7.1 60 99-159 4-65 (297)
202 PRK08017 oxidoreductase; Provi 98.1 4.2E-06 9.2E-11 66.0 5.5 39 102-140 3-41 (256)
203 KOG1478|consensus 98.1 7.6E-06 1.7E-10 66.9 6.9 60 100-159 2-69 (341)
204 TIGR02622 CDP_4_6_dhtase CDP-g 98.1 8.5E-06 1.8E-10 67.9 7.4 43 99-141 2-44 (349)
205 PRK13656 trans-2-enoyl-CoA red 98.1 2.3E-05 4.9E-10 67.5 9.6 59 99-159 39-111 (398)
206 PRK05693 short chain dehydroge 98.1 4.6E-06 1E-10 67.0 4.9 38 102-139 2-39 (274)
207 PLN02653 GDP-mannose 4,6-dehyd 98.1 8.5E-06 1.8E-10 67.6 6.6 40 97-136 2-41 (340)
208 PRK12548 shikimate 5-dehydroge 98.1 9.7E-06 2.1E-10 66.9 6.9 52 98-150 123-178 (289)
209 PF08659 KR: KR domain; Inter 98.1 1.5E-05 3.2E-10 61.1 7.3 56 103-159 2-61 (181)
210 PRK05884 short chain dehydroge 98.1 4.9E-06 1.1E-10 65.4 4.6 43 103-145 2-44 (223)
211 TIGR03589 PseB UDP-N-acetylglu 98.1 1E-05 2.2E-10 67.2 6.5 58 99-159 2-61 (324)
212 PLN02896 cinnamyl-alcohol dehy 98.0 1.7E-05 3.7E-10 66.2 6.8 59 99-159 8-66 (353)
213 KOG1610|consensus 98.0 3.8E-05 8.1E-10 64.1 8.5 51 96-146 24-74 (322)
214 PRK08261 fabG 3-ketoacyl-(acyl 98.0 2.8E-05 6E-10 67.1 7.9 37 98-134 207-243 (450)
215 PRK07577 short chain dehydroge 98.0 1.4E-05 3E-10 62.3 5.2 36 100-135 2-37 (234)
216 PRK08219 short chain dehydroge 97.9 1.8E-05 4E-10 61.1 5.6 41 101-142 3-43 (227)
217 PLN02986 cinnamyl-alcohol dehy 97.9 3.3E-05 7.2E-10 63.4 7.4 43 99-141 3-45 (322)
218 TIGR02813 omega_3_PfaA polyket 97.9 2.1E-05 4.6E-10 80.4 7.3 35 100-134 1996-2031(2582)
219 PRK06953 short chain dehydroge 97.9 1.7E-05 3.6E-10 61.8 5.1 39 102-140 2-40 (222)
220 PRK08309 short chain dehydroge 97.9 3.2E-05 6.9E-10 59.6 6.4 54 103-159 2-55 (177)
221 PLN02240 UDP-glucose 4-epimera 97.9 6E-05 1.3E-09 62.4 8.2 39 98-136 2-40 (352)
222 PLN02662 cinnamyl-alcohol dehy 97.9 4.6E-05 9.9E-10 62.3 6.9 40 100-139 3-42 (322)
223 PLN02214 cinnamoyl-CoA reducta 97.8 7E-05 1.5E-09 62.6 7.8 39 99-137 8-46 (342)
224 PLN00141 Tic62-NAD(P)-related 97.8 3.2E-05 6.9E-10 61.6 5.5 42 98-139 14-55 (251)
225 PLN02686 cinnamoyl-CoA reducta 97.8 5.7E-05 1.2E-09 63.9 7.2 44 98-141 50-93 (367)
226 KOG1209|consensus 97.8 4.3E-05 9.3E-10 61.2 5.6 43 100-142 6-49 (289)
227 PLN02572 UDP-sulfoquinovose sy 97.8 9.8E-05 2.1E-09 64.2 8.3 38 96-133 42-79 (442)
228 cd01078 NAD_bind_H4MPT_DH NADP 97.8 5.8E-05 1.3E-09 58.3 5.8 50 98-147 25-74 (194)
229 PLN02650 dihydroflavonol-4-red 97.8 7.2E-05 1.6E-09 62.3 6.7 43 100-142 4-46 (351)
230 PLN00198 anthocyanidin reducta 97.8 0.0001 2.3E-09 61.0 7.5 42 98-139 6-47 (338)
231 TIGR01472 gmd GDP-mannose 4,6- 97.7 6.1E-05 1.3E-09 62.6 6.0 35 102-136 1-35 (343)
232 KOG1611|consensus 97.7 8E-05 1.7E-09 59.8 6.2 58 101-159 3-62 (249)
233 COG1086 Predicted nucleoside-d 97.7 0.00011 2.3E-09 65.7 7.6 61 98-159 247-310 (588)
234 PLN02657 3,8-divinyl protochlo 97.6 0.00014 3E-09 62.2 6.3 39 99-137 58-96 (390)
235 PRK10675 UDP-galactose-4-epime 97.5 0.00034 7.3E-09 57.6 7.2 34 103-136 2-35 (338)
236 KOG1502|consensus 97.5 0.00029 6.2E-09 59.3 6.5 59 100-159 5-65 (327)
237 PF01488 Shikimate_DH: Shikima 97.5 0.00034 7.4E-09 51.3 6.0 48 97-145 8-56 (135)
238 COG0623 FabI Enoyl-[acyl-carri 97.4 0.00053 1.1E-08 55.3 7.1 61 97-159 2-64 (259)
239 TIGR01746 Thioester-redct thio 97.4 0.0006 1.3E-08 55.9 6.8 34 103-136 1-36 (367)
240 PRK14106 murD UDP-N-acetylmura 97.3 0.00063 1.4E-08 58.7 7.1 53 98-151 2-55 (450)
241 TIGR01179 galE UDP-glucose-4-e 97.3 0.00047 1E-08 55.8 5.9 34 103-136 1-34 (328)
242 PF13561 adh_short_C2: Enoyl-( 97.3 0.00023 5.1E-09 56.0 3.8 39 111-149 6-44 (241)
243 PRK09009 C factor cell-cell si 97.3 0.00035 7.7E-09 54.5 4.6 33 102-134 1-35 (235)
244 PRK02472 murD UDP-N-acetylmura 97.3 0.00061 1.3E-08 58.8 6.4 53 98-151 2-54 (447)
245 PRK07578 short chain dehydroge 97.3 0.00034 7.3E-09 53.5 4.2 32 103-135 2-33 (199)
246 PRK15181 Vi polysaccharide bio 97.3 0.00098 2.1E-08 55.7 7.2 39 98-136 12-50 (348)
247 PRK05579 bifunctional phosphop 97.2 0.00045 9.8E-09 59.7 5.1 37 98-134 185-237 (399)
248 PRK00258 aroE shikimate 5-dehy 97.2 0.00061 1.3E-08 55.8 5.3 49 98-147 120-169 (278)
249 PLN02520 bifunctional 3-dehydr 97.2 0.0006 1.3E-08 60.8 5.3 47 98-145 376-422 (529)
250 PF02719 Polysacc_synt_2: Poly 97.1 0.00038 8.2E-09 57.8 3.4 45 104-148 1-46 (293)
251 TIGR00507 aroE shikimate 5-deh 97.1 0.001 2.2E-08 54.2 5.5 49 99-148 115-163 (270)
252 TIGR03466 HpnA hopanoid-associ 97.1 0.00073 1.6E-08 54.9 4.4 35 103-137 2-36 (328)
253 PRK10217 dTDP-glucose 4,6-dehy 97.1 0.0012 2.6E-08 54.8 5.7 33 102-134 2-35 (355)
254 KOG1371|consensus 97.1 0.0022 4.7E-08 54.0 7.1 58 101-159 2-62 (343)
255 PRK14982 acyl-ACP reductase; P 97.1 0.00096 2.1E-08 56.6 5.0 49 98-146 152-202 (340)
256 PLN02427 UDP-apiose/xylose syn 97.0 0.0013 2.8E-08 55.6 5.9 40 98-137 11-51 (386)
257 PF13460 NAD_binding_10: NADH( 97.0 0.00099 2.1E-08 50.0 4.6 36 104-139 1-36 (183)
258 PLN02778 3,5-epimerase/4-reduc 97.0 0.0031 6.7E-08 51.9 7.7 51 101-151 9-59 (298)
259 TIGR01181 dTDP_gluc_dehyt dTDP 96.9 0.0024 5.3E-08 51.4 6.2 32 103-134 1-34 (317)
260 TIGR00521 coaBC_dfp phosphopan 96.8 0.0022 4.7E-08 55.3 5.1 37 98-134 182-234 (390)
261 TIGR01214 rmlD dTDP-4-dehydror 96.8 0.0051 1.1E-07 49.3 7.0 48 104-151 2-52 (287)
262 cd01065 NAD_bind_Shikimate_DH 96.8 0.0033 7.2E-08 46.2 5.4 48 99-147 17-65 (155)
263 cd01075 NAD_bind_Leu_Phe_Val_D 96.8 0.0028 6.1E-08 49.6 5.2 48 97-145 24-71 (200)
264 TIGR01777 yfcH conserved hypot 96.7 0.0017 3.8E-08 51.9 3.9 34 104-137 1-34 (292)
265 PLN00016 RNA-binding protein; 96.6 0.0057 1.2E-07 51.7 6.5 38 100-137 51-92 (378)
266 CHL00194 ycf39 Ycf39; Provisio 96.6 0.0032 7E-08 51.8 4.7 35 103-137 2-36 (317)
267 PLN02206 UDP-glucuronate decar 96.6 0.0069 1.5E-07 52.8 6.7 36 100-135 118-153 (442)
268 TIGR03649 ergot_EASG ergot alk 96.5 0.0031 6.6E-08 50.9 4.1 33 104-136 2-34 (285)
269 COG0702 Predicted nucleoside-d 96.5 0.0039 8.4E-08 49.3 4.4 40 103-142 2-41 (275)
270 PRK12549 shikimate 5-dehydroge 96.4 0.013 2.7E-07 48.4 7.2 50 98-148 124-174 (284)
271 COG1748 LYS9 Saccharopine dehy 96.4 0.0051 1.1E-07 53.1 4.9 53 102-159 2-55 (389)
272 PRK10084 dTDP-glucose 4,6 dehy 96.4 0.0086 1.9E-07 49.7 6.2 32 103-134 2-34 (352)
273 PRK09310 aroDE bifunctional 3- 96.3 0.0061 1.3E-07 53.8 5.1 47 98-145 329-375 (477)
274 PRK11908 NAD-dependent epimera 96.3 0.0072 1.6E-07 50.2 5.3 35 102-136 2-37 (347)
275 PLN02166 dTDP-glucose 4,6-dehy 96.3 0.012 2.7E-07 51.2 6.8 35 101-135 120-154 (436)
276 PLN02695 GDP-D-mannose-3',5'-e 96.3 0.0056 1.2E-07 51.8 4.6 36 100-135 20-55 (370)
277 PF05368 NmrA: NmrA-like famil 96.3 0.011 2.4E-07 46.2 5.8 46 104-151 1-46 (233)
278 PRK08125 bifunctional UDP-gluc 96.2 0.011 2.4E-07 53.9 6.1 38 99-136 313-351 (660)
279 PRK09987 dTDP-4-dehydrorhamnos 96.2 0.019 4.2E-07 46.9 6.9 48 103-151 2-56 (299)
280 COG0451 WcaG Nucleoside-diphos 96.1 0.0079 1.7E-07 48.5 4.4 33 104-136 3-35 (314)
281 PLN02260 probable rhamnose bio 96.1 0.018 3.8E-07 52.4 6.9 36 99-134 4-41 (668)
282 COG1087 GalE UDP-glucose 4-epi 96.1 0.01 2.3E-07 49.6 4.9 38 103-140 2-39 (329)
283 COG0169 AroE Shikimate 5-dehyd 96.0 0.018 3.8E-07 47.8 6.0 51 98-149 123-174 (283)
284 PRK11150 rfaD ADP-L-glycero-D- 95.9 0.01 2.2E-07 48.3 4.2 30 104-133 2-32 (308)
285 PRK07201 short chain dehydroge 95.9 0.024 5.3E-07 51.0 6.7 33 103-135 2-36 (657)
286 PRK09620 hypothetical protein; 95.8 0.015 3.2E-07 46.7 4.7 35 99-133 1-51 (229)
287 cd05212 NAD_bind_m-THF_DH_Cycl 95.8 0.034 7.5E-07 41.3 6.3 47 97-143 24-70 (140)
288 PRK14027 quinate/shikimate deh 95.8 0.034 7.4E-07 45.9 6.8 49 98-147 124-173 (283)
289 TIGR01809 Shik-DH-AROM shikima 95.8 0.021 4.5E-07 47.0 5.5 49 98-147 122-171 (282)
290 cd01080 NAD_bind_m-THF_DH_Cycl 95.7 0.026 5.6E-07 43.2 5.5 45 97-141 40-84 (168)
291 TIGR02197 heptose_epim ADP-L-g 95.6 0.014 2.9E-07 47.3 3.8 31 104-134 1-32 (314)
292 PF01370 Epimerase: NAD depend 95.5 0.035 7.5E-07 42.8 5.4 33 104-136 1-33 (236)
293 TIGR02853 spore_dpaA dipicolin 95.4 0.027 5.8E-07 46.6 4.9 41 98-139 148-188 (287)
294 PLN02725 GDP-4-keto-6-deoxyman 95.3 0.047 1E-06 44.0 6.0 29 105-133 1-29 (306)
295 PF02882 THF_DHG_CYH_C: Tetrah 95.1 0.063 1.4E-06 40.9 5.7 46 98-143 33-78 (160)
296 KOG1430|consensus 95.1 0.049 1.1E-06 46.6 5.5 37 100-136 3-41 (361)
297 PRK14194 bifunctional 5,10-met 95.0 0.075 1.6E-06 44.4 6.4 47 97-143 155-201 (301)
298 PRK14175 bifunctional 5,10-met 95.0 0.071 1.5E-06 44.3 6.1 43 98-140 155-197 (286)
299 cd05276 p53_inducible_oxidored 95.0 0.052 1.1E-06 43.2 5.2 40 100-139 139-178 (323)
300 PRK01438 murD UDP-N-acetylmura 95.0 0.08 1.7E-06 46.2 6.8 53 98-151 13-66 (480)
301 PRK06849 hypothetical protein; 94.9 0.063 1.4E-06 45.7 5.9 36 100-135 3-38 (389)
302 PRK05865 hypothetical protein; 94.9 0.032 7E-07 52.6 4.4 33 103-135 2-34 (854)
303 TIGR02114 coaB_strep phosphopa 94.8 0.046 9.9E-07 43.6 4.5 31 103-133 16-47 (227)
304 TIGR02356 adenyl_thiF thiazole 94.8 0.1 2.2E-06 40.7 6.4 52 98-150 18-89 (202)
305 PF03435 Saccharop_dh: Sacchar 94.8 0.043 9.4E-07 46.6 4.6 52 104-159 1-54 (386)
306 PF02737 3HCDH_N: 3-hydroxyacy 94.8 0.059 1.3E-06 41.4 4.9 43 104-147 2-44 (180)
307 cd08295 double_bond_reductase_ 94.8 0.054 1.2E-06 44.7 4.9 42 100-141 151-192 (338)
308 cd08253 zeta_crystallin Zeta-c 94.7 0.066 1.4E-06 42.7 5.2 40 100-139 144-183 (325)
309 cd08293 PTGR2 Prostaglandin re 94.6 0.066 1.4E-06 44.0 5.0 41 101-141 155-196 (345)
310 cd08259 Zn_ADH5 Alcohol dehydr 94.5 0.076 1.6E-06 43.0 5.2 40 100-139 162-201 (332)
311 PF00670 AdoHcyase_NAD: S-aden 94.5 0.056 1.2E-06 41.3 4.0 42 97-139 19-60 (162)
312 PRK13940 glutamyl-tRNA reducta 94.5 0.072 1.6E-06 46.3 5.2 47 98-145 178-225 (414)
313 PRK06732 phosphopantothenate-- 94.5 0.056 1.2E-06 43.2 4.2 33 102-134 16-49 (229)
314 TIGR02825 B4_12hDH leukotriene 94.5 0.074 1.6E-06 43.5 5.0 40 100-139 138-177 (325)
315 COG1090 Predicted nucleoside-d 94.4 0.057 1.2E-06 44.8 4.1 37 104-140 1-37 (297)
316 PF01073 3Beta_HSD: 3-beta hyd 94.4 0.052 1.1E-06 44.5 3.9 33 105-137 1-35 (280)
317 PRK12320 hypothetical protein; 94.4 0.055 1.2E-06 50.0 4.4 33 103-135 2-34 (699)
318 PRK00066 ldh L-lactate dehydro 94.4 0.14 3.1E-06 42.8 6.5 50 98-148 3-54 (315)
319 TIGR01915 npdG NADPH-dependent 94.3 0.094 2E-06 41.2 5.2 42 103-144 2-43 (219)
320 PRK04148 hypothetical protein; 94.3 0.13 2.7E-06 38.2 5.4 40 100-141 16-55 (134)
321 PRK12475 thiamine/molybdopteri 94.3 0.15 3.3E-06 43.1 6.6 54 97-151 20-95 (338)
322 PF02826 2-Hacid_dh_C: D-isome 94.3 0.29 6.3E-06 37.3 7.6 44 94-138 29-72 (178)
323 PF12242 Eno-Rase_NADH_b: NAD( 94.2 0.05 1.1E-06 36.6 2.8 33 101-133 39-72 (78)
324 cd08266 Zn_ADH_like1 Alcohol d 94.2 0.098 2.1E-06 42.2 5.2 40 100-139 166-205 (342)
325 PRK10792 bifunctional 5,10-met 94.2 0.16 3.5E-06 42.1 6.5 47 97-143 155-201 (285)
326 PLN03154 putative allyl alcoho 94.2 0.087 1.9E-06 44.1 5.0 41 100-140 158-198 (348)
327 cd08294 leukotriene_B4_DH_like 94.2 0.093 2E-06 42.6 5.0 39 100-138 143-181 (329)
328 PF03807 F420_oxidored: NADP o 94.2 0.08 1.7E-06 35.7 3.9 41 103-145 2-46 (96)
329 PRK14191 bifunctional 5,10-met 94.1 0.15 3.1E-06 42.4 6.0 43 97-139 153-195 (285)
330 PRK14188 bifunctional 5,10-met 94.1 0.16 3.4E-06 42.4 6.2 38 98-135 155-193 (296)
331 PRK12550 shikimate 5-dehydroge 94.1 0.087 1.9E-06 43.3 4.6 44 101-145 122-166 (272)
332 PF04321 RmlD_sub_bind: RmlD s 94.0 0.16 3.4E-06 41.6 5.9 49 103-151 2-53 (286)
333 PLN02260 probable rhamnose bio 93.9 0.23 5.1E-06 45.2 7.5 50 102-151 381-430 (668)
334 PRK12749 quinate/shikimate deh 93.9 0.17 3.6E-06 41.9 6.0 49 98-147 121-173 (288)
335 PRK14183 bifunctional 5,10-met 93.9 0.21 4.6E-06 41.4 6.5 45 97-141 153-197 (281)
336 PRK14176 bifunctional 5,10-met 93.8 0.21 4.6E-06 41.5 6.4 46 97-142 160-205 (287)
337 PRK14189 bifunctional 5,10-met 93.8 0.22 4.8E-06 41.4 6.4 45 97-141 154-198 (285)
338 PRK05476 S-adenosyl-L-homocyst 93.8 0.12 2.6E-06 45.1 5.1 41 98-139 209-249 (425)
339 PRK14177 bifunctional 5,10-met 93.7 0.24 5.2E-06 41.1 6.6 46 97-142 155-200 (284)
340 cd00401 AdoHcyase S-adenosyl-L 93.7 0.16 3.5E-06 44.2 5.8 43 98-141 199-241 (413)
341 PF12076 Wax2_C: WAX2 C-termin 93.7 0.09 2E-06 40.1 3.7 43 104-148 1-43 (164)
342 PLN02503 fatty acyl-CoA reduct 93.7 0.21 4.5E-06 45.6 6.7 37 99-135 117-156 (605)
343 PRK14190 bifunctional 5,10-met 93.6 0.24 5.2E-06 41.1 6.5 44 98-141 155-198 (284)
344 PRK07819 3-hydroxybutyryl-CoA 93.6 0.16 3.5E-06 41.8 5.5 42 103-145 7-48 (286)
345 TIGR01035 hemA glutamyl-tRNA r 93.6 0.12 2.5E-06 44.9 4.8 46 98-144 177-223 (417)
346 cd08268 MDR2 Medium chain dehy 93.5 0.14 3.1E-06 40.8 5.0 40 100-139 144-183 (328)
347 PRK14173 bifunctional 5,10-met 93.5 0.26 5.7E-06 40.9 6.5 45 97-141 151-195 (287)
348 PRK14172 bifunctional 5,10-met 93.5 0.27 5.9E-06 40.7 6.6 46 98-143 155-200 (278)
349 PRK08655 prephenate dehydrogen 93.5 0.14 3.1E-06 44.7 5.1 41 103-143 2-42 (437)
350 cd05291 HicDH_like L-2-hydroxy 93.5 0.18 3.9E-06 41.7 5.6 44 103-147 2-47 (306)
351 PRK14192 bifunctional 5,10-met 93.5 0.17 3.7E-06 41.9 5.3 41 97-137 155-195 (283)
352 PRK00045 hemA glutamyl-tRNA re 93.4 0.13 2.8E-06 44.6 4.8 47 98-145 179-226 (423)
353 PRK14179 bifunctional 5,10-met 93.4 0.29 6.2E-06 40.7 6.5 44 97-140 154-197 (284)
354 PRK08306 dipicolinate synthase 93.3 0.16 3.5E-06 42.1 5.0 41 97-138 148-188 (296)
355 PRK07688 thiamine/molybdopteri 93.3 0.28 6.1E-06 41.5 6.5 36 98-134 21-57 (339)
356 TIGR02824 quinone_pig3 putativ 93.3 0.18 3.9E-06 40.2 5.1 39 100-138 139-177 (325)
357 PRK14170 bifunctional 5,10-met 93.2 0.32 6.9E-06 40.4 6.6 46 97-142 153-198 (284)
358 KOG1203|consensus 93.2 0.2 4.3E-06 43.7 5.5 46 98-143 76-121 (411)
359 PTZ00075 Adenosylhomocysteinas 93.1 0.39 8.5E-06 42.6 7.3 41 97-138 250-290 (476)
360 PRK14186 bifunctional 5,10-met 93.1 0.33 7.2E-06 40.5 6.6 46 98-143 155-200 (297)
361 PRK14180 bifunctional 5,10-met 93.1 0.34 7.3E-06 40.2 6.5 44 98-141 155-198 (282)
362 PRK14169 bifunctional 5,10-met 93.1 0.36 7.8E-06 40.0 6.6 45 97-141 152-196 (282)
363 PF07993 NAD_binding_4: Male s 93.1 0.11 2.3E-06 41.4 3.5 31 106-136 1-33 (249)
364 PLN02516 methylenetetrahydrofo 92.9 0.36 7.9E-06 40.3 6.5 47 97-143 163-209 (299)
365 PF04127 DFP: DNA / pantothena 92.9 0.14 2.9E-06 39.9 3.7 36 99-134 1-52 (185)
366 COG0604 Qor NADPH:quinone redu 92.9 0.17 3.7E-06 42.4 4.6 35 101-135 143-177 (326)
367 TIGR03443 alpha_am_amid L-amin 92.9 0.37 8E-06 47.2 7.4 37 101-137 971-1011(1389)
368 PRK14171 bifunctional 5,10-met 92.9 0.38 8.3E-06 40.0 6.5 45 98-142 156-200 (288)
369 PRK14187 bifunctional 5,10-met 92.8 0.38 8.3E-06 40.1 6.5 47 97-143 156-202 (294)
370 PLN02996 fatty acyl-CoA reduct 92.8 0.16 3.5E-06 44.9 4.5 37 99-135 9-48 (491)
371 PRK14166 bifunctional 5,10-met 92.8 0.4 8.8E-06 39.7 6.6 46 98-143 154-199 (282)
372 PRK10669 putative cation:proto 92.7 1.1 2.3E-05 40.2 9.7 40 102-142 418-457 (558)
373 PRK14968 putative methyltransf 92.7 0.52 1.1E-05 35.2 6.6 47 100-149 23-69 (188)
374 cd05213 NAD_bind_Glutamyl_tRNA 92.6 0.22 4.7E-06 41.4 4.9 46 99-145 176-222 (311)
375 TIGR00518 alaDH alanine dehydr 92.6 0.23 4.9E-06 42.5 5.1 43 99-142 165-207 (370)
376 PRK14182 bifunctional 5,10-met 92.6 0.45 9.7E-06 39.5 6.6 44 98-141 154-197 (282)
377 PRK04308 murD UDP-N-acetylmura 92.6 0.23 4.9E-06 43.0 5.1 37 99-136 3-39 (445)
378 PRK13243 glyoxylate reductase; 92.6 1.2 2.6E-05 37.5 9.3 39 97-136 146-184 (333)
379 KOG1204|consensus 92.5 0.056 1.2E-06 43.7 1.2 27 99-125 4-30 (253)
380 TIGR01470 cysG_Nterm siroheme 92.5 0.67 1.5E-05 36.4 7.3 39 97-136 5-43 (205)
381 cd01079 NAD_bind_m-THF_DH NAD 92.4 0.32 6.9E-06 38.3 5.2 36 97-132 58-93 (197)
382 PLN02494 adenosylhomocysteinas 92.4 0.29 6.3E-06 43.4 5.5 39 98-137 251-289 (477)
383 COG4982 3-oxoacyl-[acyl-carrie 92.4 0.61 1.3E-05 42.9 7.5 39 96-134 391-430 (866)
384 cd08289 MDR_yhfp_like Yhfp put 92.4 0.29 6.3E-06 39.6 5.2 40 100-139 146-185 (326)
385 PRK06718 precorrin-2 dehydroge 92.4 0.27 5.8E-06 38.5 4.8 38 97-135 6-43 (202)
386 PRK14178 bifunctional 5,10-met 92.4 0.39 8.4E-06 39.8 5.9 46 97-142 148-193 (279)
387 cd08270 MDR4 Medium chain dehy 92.3 0.27 5.8E-06 39.4 4.9 42 100-141 132-173 (305)
388 PRK06129 3-hydroxyacyl-CoA deh 92.3 0.27 5.8E-06 40.6 5.0 39 103-142 4-42 (308)
389 COG0569 TrkA K+ transport syst 92.3 0.23 4.9E-06 39.6 4.3 38 103-141 2-39 (225)
390 KOG1429|consensus 92.2 0.25 5.5E-06 41.4 4.6 37 98-134 24-60 (350)
391 PLN02616 tetrahydrofolate dehy 92.2 0.49 1.1E-05 40.6 6.5 47 97-143 227-273 (364)
392 PRK09260 3-hydroxybutyryl-CoA 92.1 0.27 6E-06 40.1 4.8 40 103-143 3-42 (288)
393 cd00650 LDH_MDH_like NAD-depen 92.1 0.32 6.9E-06 39.3 5.1 45 104-148 1-49 (263)
394 PLN02897 tetrahydrofolate dehy 92.0 0.52 1.1E-05 40.2 6.4 46 97-142 210-255 (345)
395 PRK08762 molybdopterin biosynt 92.0 0.49 1.1E-05 40.4 6.3 53 98-151 132-204 (376)
396 COG0190 FolD 5,10-methylene-te 92.0 0.55 1.2E-05 39.0 6.3 46 98-143 153-198 (283)
397 cd05311 NAD_bind_2_malic_enz N 92.0 0.34 7.4E-06 38.6 5.0 36 98-134 22-60 (226)
398 cd05188 MDR Medium chain reduc 92.0 0.33 7.2E-06 37.7 4.9 39 100-139 134-172 (271)
399 PF02254 TrkA_N: TrkA-N domain 92.0 0.29 6.2E-06 34.0 4.1 37 104-141 1-37 (116)
400 PF13241 NAD_binding_7: Putati 91.9 0.15 3.1E-06 35.6 2.5 37 98-135 4-40 (103)
401 PRK06719 precorrin-2 dehydroge 91.9 0.36 7.7E-06 36.4 4.8 35 97-132 9-43 (157)
402 cd08241 QOR1 Quinone oxidoredu 91.9 0.35 7.6E-06 38.4 5.1 38 100-137 139-176 (323)
403 PF00056 Ldh_1_N: lactate/mala 91.8 0.44 9.5E-06 35.1 5.2 45 103-147 2-48 (141)
404 PLN00203 glutamyl-tRNA reducta 91.8 0.26 5.6E-06 44.2 4.6 46 99-145 264-310 (519)
405 cd08244 MDR_enoyl_red Possible 91.8 0.38 8.2E-06 38.8 5.2 40 100-139 142-181 (324)
406 cd05288 PGDH Prostaglandin deh 91.7 0.35 7.6E-06 39.2 5.0 40 100-139 145-184 (329)
407 COG1064 AdhP Zn-dependent alco 91.7 0.36 7.8E-06 41.0 5.1 41 100-141 166-206 (339)
408 TIGR03201 dearomat_had 6-hydro 91.7 0.33 7.3E-06 40.3 4.9 39 100-139 166-204 (349)
409 PRK07530 3-hydroxybutyryl-CoA 91.7 0.42 9.1E-06 39.0 5.4 42 102-144 5-46 (292)
410 PRK08644 thiamine biosynthesis 91.6 0.37 8E-06 38.0 4.9 37 97-134 24-61 (212)
411 PRK06035 3-hydroxyacyl-CoA deh 91.6 0.37 7.9E-06 39.4 5.0 42 102-144 4-45 (291)
412 PRK09880 L-idonate 5-dehydroge 91.6 0.35 7.5E-06 40.1 4.9 39 100-139 169-208 (343)
413 PRK14193 bifunctional 5,10-met 91.5 0.7 1.5E-05 38.4 6.5 46 98-143 155-202 (284)
414 TIGR02822 adh_fam_2 zinc-bindi 91.5 0.4 8.7E-06 39.7 5.2 39 100-139 165-203 (329)
415 cd00757 ThiF_MoeB_HesA_family 91.4 0.78 1.7E-05 36.3 6.6 53 98-151 18-90 (228)
416 PLN02928 oxidoreductase family 91.3 1.9 4E-05 36.6 9.1 38 97-135 155-192 (347)
417 PRK08293 3-hydroxybutyryl-CoA 91.2 0.45 9.8E-06 38.9 5.2 41 103-144 5-45 (287)
418 PF03446 NAD_binding_2: NAD bi 91.2 0.2 4.3E-06 37.6 2.8 34 110-143 9-42 (163)
419 PRK14181 bifunctional 5,10-met 91.1 0.81 1.8E-05 38.1 6.5 46 98-143 150-199 (287)
420 COG2085 Predicted dinucleotide 91.1 0.53 1.2E-05 37.5 5.2 41 105-145 4-45 (211)
421 cd08243 quinone_oxidoreductase 91.1 0.52 1.1E-05 37.7 5.3 39 100-138 142-180 (320)
422 PRK14184 bifunctional 5,10-met 91.1 0.69 1.5E-05 38.5 6.1 45 98-142 154-202 (286)
423 PRK07066 3-hydroxybutyryl-CoA 91.1 0.46 1E-05 40.0 5.1 41 102-143 8-48 (321)
424 cd08250 Mgc45594_like Mgc45594 91.0 0.47 1E-05 38.5 5.0 40 100-139 139-178 (329)
425 cd01076 NAD_bind_1_Glu_DH NAD( 91.0 1 2.3E-05 35.9 6.9 36 97-133 27-63 (227)
426 PRK05597 molybdopterin biosynt 90.9 0.79 1.7E-05 39.0 6.4 54 97-151 24-97 (355)
427 TIGR02354 thiF_fam2 thiamine b 90.7 0.2 4.4E-06 39.2 2.5 37 97-134 17-54 (200)
428 cd05286 QOR2 Quinone oxidoredu 90.7 0.56 1.2E-05 37.1 5.2 39 100-138 136-174 (320)
429 TIGR01968 minD_bact septum sit 90.7 0.5 1.1E-05 37.2 4.8 36 101-136 1-41 (261)
430 TIGR03018 pepcterm_TyrKin exop 90.7 1.4 3.1E-05 34.1 7.3 37 100-136 34-76 (207)
431 PRK13982 bifunctional SbtC-lik 90.6 0.55 1.2E-05 41.7 5.4 36 97-132 252-303 (475)
432 TIGR00936 ahcY adenosylhomocys 90.6 0.52 1.1E-05 41.0 5.2 40 98-138 192-231 (406)
433 cd05280 MDR_yhdh_yhfp Yhdh and 90.6 0.55 1.2E-05 37.8 5.1 38 101-138 147-184 (325)
434 PRK09496 trkA potassium transp 90.5 0.5 1.1E-05 40.6 5.0 44 99-143 229-272 (453)
435 PRK09496 trkA potassium transp 90.4 0.4 8.6E-06 41.2 4.3 40 103-143 2-41 (453)
436 cd08292 ETR_like_2 2-enoyl thi 90.4 0.52 1.1E-05 38.0 4.8 38 100-137 139-176 (324)
437 PTZ00354 alcohol dehydrogenase 90.3 0.62 1.3E-05 37.6 5.1 38 100-137 140-177 (334)
438 PRK08410 2-hydroxyacid dehydro 90.2 2.5 5.4E-05 35.2 8.8 38 97-135 141-178 (311)
439 PRK12480 D-lactate dehydrogena 90.2 3.3 7.1E-05 34.9 9.6 40 97-137 142-181 (330)
440 cd08246 crotonyl_coA_red croto 90.2 0.58 1.2E-05 39.5 5.0 40 100-139 193-232 (393)
441 cd08290 ETR 2-enoyl thioester 90.1 1.1 2.4E-05 36.6 6.5 37 100-136 146-182 (341)
442 cd01483 E1_enzyme_family Super 90.1 1.3 2.8E-05 32.1 6.3 30 104-134 2-32 (143)
443 PF12847 Methyltransf_18: Meth 90.1 2.1 4.6E-05 29.0 7.1 55 101-159 2-60 (112)
444 TIGR01751 crot-CoA-red crotony 90.1 0.59 1.3E-05 39.6 5.0 39 100-138 189-227 (398)
445 PRK14168 bifunctional 5,10-met 90.0 1.1 2.4E-05 37.5 6.4 46 97-142 157-206 (297)
446 cd08239 THR_DH_like L-threonin 90.0 0.52 1.1E-05 38.7 4.5 39 100-139 163-202 (339)
447 TIGR02817 adh_fam_1 zinc-bindi 90.0 0.65 1.4E-05 37.8 5.1 37 101-137 149-186 (336)
448 KOG0025|consensus 90.0 1.1 2.4E-05 37.7 6.3 51 101-151 161-211 (354)
449 cd00755 YgdL_like Family of ac 90.0 1.1 2.4E-05 35.9 6.2 36 98-134 8-44 (231)
450 PRK03562 glutathione-regulated 89.9 3.5 7.6E-05 37.7 10.1 40 101-141 400-439 (621)
451 PRK13771 putative alcohol dehy 89.8 0.77 1.7E-05 37.4 5.4 41 100-140 162-202 (334)
452 smart00829 PKS_ER Enoylreducta 89.8 0.73 1.6E-05 35.8 5.0 40 100-139 104-143 (288)
453 PRK06130 3-hydroxybutyryl-CoA 89.8 0.76 1.6E-05 37.8 5.3 41 103-144 6-46 (311)
454 PRK15116 sulfur acceptor prote 89.7 1.1 2.4E-05 36.8 6.2 37 97-134 26-63 (268)
455 TIGR03366 HpnZ_proposed putati 89.7 0.6 1.3E-05 37.6 4.6 38 100-138 120-158 (280)
456 PRK14174 bifunctional 5,10-met 89.7 1.2 2.6E-05 37.2 6.4 46 97-142 155-204 (295)
457 cd05282 ETR_like 2-enoyl thioe 89.7 0.71 1.5E-05 37.1 5.0 38 100-137 138-175 (323)
458 cd05191 NAD_bind_amino_acid_DH 89.6 0.88 1.9E-05 30.4 4.7 36 97-133 19-55 (86)
459 PF03848 TehB: Tellurite resis 89.6 1.9 4.1E-05 33.8 7.1 56 100-159 30-85 (192)
460 CHL00175 minD septum-site dete 89.6 0.71 1.5E-05 37.3 4.9 37 100-136 14-55 (281)
461 PLN03139 formate dehydrogenase 89.6 2.7 5.8E-05 36.4 8.7 38 97-135 195-232 (386)
462 PRK14167 bifunctional 5,10-met 89.5 1.2 2.6E-05 37.3 6.3 45 98-142 154-202 (297)
463 PRK06932 glycerate dehydrogena 89.4 2.7 5.9E-05 35.1 8.4 37 97-134 143-179 (314)
464 TIGR03840 TMPT_Se_Te thiopurin 89.4 1.1 2.5E-05 35.3 5.9 41 100-143 34-74 (213)
465 cd08288 MDR_yhdh Yhdh putative 89.3 0.86 1.9E-05 36.8 5.3 40 100-139 146-185 (324)
466 PLN02545 3-hydroxybutyryl-CoA 89.3 0.86 1.9E-05 37.3 5.3 38 103-141 6-43 (295)
467 PRK14185 bifunctional 5,10-met 89.3 1.4 2.9E-05 36.9 6.4 46 98-143 154-203 (293)
468 PLN02586 probable cinnamyl alc 89.1 0.84 1.8E-05 38.3 5.2 41 100-141 183-223 (360)
469 PRK13255 thiopurine S-methyltr 89.1 1.2 2.7E-05 35.2 5.9 40 101-143 38-77 (218)
470 PRK03659 glutathione-regulated 89.1 4.8 0.0001 36.6 10.3 39 102-141 401-439 (601)
471 TIGR01969 minD_arch cell divis 88.9 0.87 1.9E-05 35.7 4.9 34 102-135 1-39 (251)
472 PRK00141 murD UDP-N-acetylmura 88.9 0.84 1.8E-05 40.1 5.2 40 97-137 11-50 (473)
473 PF03721 UDPG_MGDP_dh_N: UDP-g 88.8 0.61 1.3E-05 36.0 3.8 33 109-141 7-39 (185)
474 PRK07574 formate dehydrogenase 88.7 3.9 8.5E-05 35.3 9.1 38 97-135 188-225 (385)
475 cd08230 glucose_DH Glucose deh 88.6 0.83 1.8E-05 38.0 4.8 34 100-134 172-205 (355)
476 cd08296 CAD_like Cinnamyl alco 88.6 0.98 2.1E-05 37.1 5.2 39 100-139 163-201 (333)
477 PF00070 Pyr_redox: Pyridine n 88.6 1.6 3.5E-05 28.4 5.4 46 105-151 3-56 (80)
478 TIGR02818 adh_III_F_hyde S-(hy 88.6 0.87 1.9E-05 38.2 5.0 39 100-139 185-224 (368)
479 PRK05600 thiamine biosynthesis 88.6 1.4 3E-05 37.8 6.2 37 97-134 37-74 (370)
480 PLN02740 Alcohol dehydrogenase 88.5 0.89 1.9E-05 38.4 5.0 39 100-139 198-237 (381)
481 COG2227 UbiG 2-polyprenyl-3-me 88.5 1.1 2.4E-05 36.4 5.2 43 98-143 57-99 (243)
482 PRK11207 tellurite resistance 88.4 2.3 5E-05 32.8 6.9 48 100-150 30-77 (197)
483 cd08252 AL_MDR Arginate lyase 88.4 1.1 2.4E-05 36.4 5.3 38 101-138 150-188 (336)
484 TIGR02279 PaaC-3OHAcCoADH 3-hy 88.3 0.9 2E-05 40.5 5.0 41 102-143 6-46 (503)
485 cd08238 sorbose_phosphate_red 88.2 0.83 1.8E-05 39.1 4.6 42 100-141 175-219 (410)
486 TIGR02355 moeB molybdopterin s 88.2 1.8 4E-05 34.7 6.4 36 98-134 21-57 (240)
487 cd08237 ribitol-5-phosphate_DH 88.2 0.86 1.9E-05 37.9 4.6 41 100-141 163-205 (341)
488 PRK06487 glycerate dehydrogena 88.2 3.4 7.4E-05 34.5 8.2 37 97-134 144-180 (317)
489 cd08297 CAD3 Cinnamyl alcohol 88.1 1.1 2.4E-05 36.7 5.1 39 100-138 165-203 (341)
490 PRK11199 tyrA bifunctional cho 88.0 3.5 7.5E-05 35.3 8.3 36 100-135 97-132 (374)
491 TIGR01505 tartro_sem_red 2-hyd 88.0 0.79 1.7E-05 37.4 4.2 33 109-141 6-38 (291)
492 PF01210 NAD_Gly3P_dh_N: NAD-d 88.0 0.57 1.2E-05 34.9 3.1 38 105-143 3-40 (157)
493 PRK08268 3-hydroxy-acyl-CoA de 88.0 1 2.2E-05 40.1 5.2 43 102-145 8-50 (507)
494 TIGR03815 CpaE_hom_Actino heli 87.9 0.93 2E-05 37.6 4.7 38 99-136 91-133 (322)
495 PRK01710 murD UDP-N-acetylmura 87.9 1.7 3.6E-05 38.0 6.4 51 99-150 12-63 (458)
496 PF01656 CbiA: CobQ/CobB/MinD/ 87.8 0.86 1.9E-05 34.1 4.0 34 104-137 1-39 (195)
497 TIGR01007 eps_fam capsular exo 87.8 1.2 2.7E-05 34.1 5.0 36 101-136 17-57 (204)
498 PRK15469 ghrA bifunctional gly 87.8 4.4 9.6E-05 33.9 8.6 39 97-136 132-170 (312)
499 PRK06436 glycerate dehydrogena 87.8 4.2 9.1E-05 33.9 8.4 39 96-135 117-155 (303)
500 PF02558 ApbA: Ketopantoate re 87.7 0.62 1.3E-05 33.9 3.1 33 109-142 5-37 (151)
No 1
>KOG1201|consensus
Probab=99.51 E-value=1.7e-13 Score=112.69 Aligned_cols=89 Identities=40% Similarity=0.715 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040 69 LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
+..++.+....++.++...+..+.+.+.++..|++++||||++|+|+++|.++|++|++++++|.|.+..+++++++++.
T Consensus 6 ~~~~l~~~~~~~~~~~~s~~~~~l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~ 85 (300)
T KOG1201|consen 6 LLILLLLLTLLLLALLESLIKLLLPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI 85 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc
Confidence 44445555566666666677777788888999999999999999999999999999999999999999999999999988
Q ss_pred CCCeEEEEecC
Q psy2040 149 GYKNIHTYKRS 159 (159)
Q Consensus 149 g~~~v~~~~~D 159 (159)
| + ++++.||
T Consensus 86 g-~-~~~y~cd 94 (300)
T KOG1201|consen 86 G-E-AKAYTCD 94 (300)
T ss_pred C-c-eeEEEec
Confidence 6 7 9999998
No 2
>KOG1014|consensus
Probab=99.32 E-value=1.4e-11 Score=101.86 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=54.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
+-.|+|++|||++.|||++.|++||++|.+|++++|++++++++++||+++ +.+ +..+.+|
T Consensus 46 ~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ve-v~~i~~D 107 (312)
T KOG1014|consen 46 EKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVE-VRIIAID 107 (312)
T ss_pred HhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcE-EEEEEEe
Confidence 344699999999999999999999999999999999999999999999876 445 7777776
No 3
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.30 E-value=6e-12 Score=102.70 Aligned_cols=62 Identities=29% Similarity=0.451 Sum_probs=57.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
..+++++++|||+|+|||+++|++|+++|++|++++|+++++++++++++.+ +.+ +..+++|
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~-v~vi~~D 64 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE-VEVIPAD 64 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCce-EEEEECc
Confidence 3467899999999999999999999999999999999999999999999876 466 8888887
No 4
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.21 E-value=1.3e-10 Score=96.66 Aligned_cols=59 Identities=22% Similarity=0.298 Sum_probs=52.0
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
.|++++||||++|||+++|++|+++|++|++++|++++++++.+++++.. .+ +..+++|
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~-~~~~~~D 112 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQ-IKTVVVD 112 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcE-EEEEEEE
Confidence 58999999999999999999999999999999999999999999987653 34 6666665
No 5
>KOG1205|consensus
Probab=99.14 E-value=7.5e-11 Score=97.00 Aligned_cols=66 Identities=23% Similarity=0.337 Sum_probs=58.9
Q ss_pred CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCe-EEEEecC
Q psy2040 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN-IHTYKRS 159 (159)
Q Consensus 94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~-v~~~~~D 159 (159)
..+..+.||+++|||+|+|||.++|++|+++|++++++.|..++++++.+++++.+..+ ++.+++|
T Consensus 5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~D 71 (282)
T KOG1205|consen 5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLD 71 (282)
T ss_pred ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCc
Confidence 34567899999999999999999999999999999999999999999999998876543 7888887
No 6
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.14 E-value=9.5e-11 Score=94.24 Aligned_cols=60 Identities=20% Similarity=0.275 Sum_probs=53.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+.+|+++|||+|+|||.++|++|+++|++|++.+|++++++++++++.+ .+ +.....|
T Consensus 2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~-~~~~~~D 61 (246)
T COG4221 2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GA-ALALALD 61 (246)
T ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--Cc-eEEEeec
Confidence 456789999999999999999999999999999999999999999999975 44 5666555
No 7
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.3e-10 Score=89.74 Aligned_cols=61 Identities=23% Similarity=0.388 Sum_probs=55.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++||+++|||+++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~-~~~~~~D 62 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN-VYSFQLK 62 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC-eEEEEcc
Confidence 467999999999999999999999999999999999999999999888877777 7778776
No 8
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.08 E-value=4.4e-10 Score=89.18 Aligned_cols=62 Identities=23% Similarity=0.349 Sum_probs=55.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++++|+++||||++|||++++++|+++|++|++.+|++++++++.+++++.+.+ +..+.+|
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE-AVALAGD 63 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 4567899999999999999999999999999999999998888888888877777 7788776
No 9
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.08 E-value=3.8e-10 Score=91.51 Aligned_cols=63 Identities=22% Similarity=0.427 Sum_probs=56.5
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|..+++|+++|||+++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~D 63 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD-VHGVMCD 63 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEeCC
Confidence 45678999999999999999999999999999999999998888888888877777 7788877
No 10
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.07 E-value=4.5e-10 Score=92.82 Aligned_cols=64 Identities=16% Similarity=0.216 Sum_probs=55.9
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
.+.+++||+++||||++|||+++|++|+++|++|++++|++++.++..+++++.. .+ +.++++|
T Consensus 8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~-v~~~~~D 73 (313)
T PRK05854 8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAK-LSLRALD 73 (313)
T ss_pred cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCc-eEEEEec
Confidence 4567889999999999999999999999999999999999998888888887653 35 7778877
No 11
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.07 E-value=4.8e-10 Score=89.06 Aligned_cols=62 Identities=21% Similarity=0.265 Sum_probs=55.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||.+++++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 66 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGK-VVPVCCD 66 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence 3578999999999999999999999999999999999998889988888877776 7777776
No 12
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.7e-10 Score=91.80 Aligned_cols=63 Identities=22% Similarity=0.291 Sum_probs=54.0
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC----------ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE----------KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~----------~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.+++||+++||||++|||+++|++|+++|++|++++|+. ++++++.+++++.+.+ +..+++|
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 75 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR-GIAVQVD 75 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCc-eEEEEcC
Confidence 4567899999999999999999999999999999999973 4566777778777777 7788887
No 13
>KOG0725|consensus
Probab=99.05 E-value=6.9e-10 Score=90.82 Aligned_cols=63 Identities=27% Similarity=0.336 Sum_probs=55.6
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC---CCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG---YKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g---~~~v~~~~~D 159 (159)
+..+.||+++|||+++|||+++|++|++.|++|++++|++++++++.++++..+ .+ +..+.||
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 68 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGK-VLAIVCD 68 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-eEEEECc
Confidence 356889999999999999999999999999999999999999999988887654 34 7777776
No 14
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.04 E-value=6.4e-10 Score=89.43 Aligned_cols=61 Identities=13% Similarity=0.307 Sum_probs=53.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
+++||+++|||+++|||+++|++|+++|++|++++|+.+++++..+++++. +.+ +..+++|
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 66 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVD-VSYIVAD 66 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEec
Confidence 478999999999999999999999999999999999988888888888664 456 7788877
No 15
>PRK08589 short chain dehydrogenase; Validated
Probab=99.04 E-value=7.3e-10 Score=89.30 Aligned_cols=61 Identities=30% Similarity=0.453 Sum_probs=54.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||+++|++|+++|++|++++|+ +++++..+++++.+.+ +..+++|
T Consensus 2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~-~~~~~~D 62 (272)
T PRK08589 2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGK-AKAYHVD 62 (272)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCe-EEEEEee
Confidence 35679999999999999999999999999999999999 7788888888777777 7888876
No 16
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.01 E-value=7.9e-10 Score=92.50 Aligned_cols=62 Identities=24% Similarity=0.388 Sum_probs=56.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++.+|+++|||+++|||+++|++|+++|++|++++|++++++++.+++++.|.+ +..+.+|
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~-~~~~~~D 64 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE-VLVVPTD 64 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence 4577899999999999999999999999999999999999999999999888877 7777776
No 17
>KOG1208|consensus
Probab=99.01 E-value=1.2e-09 Score=91.30 Aligned_cols=64 Identities=27% Similarity=0.368 Sum_probs=56.5
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
...++.|++++|||+++|||+++|++|+++|++|++.+||.++.+++++++++.. .+ +.++++|
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~-i~~~~lD 94 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQK-IRVIQLD 94 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCc-eEEEECC
Confidence 3456789999999999999999999999999999999999999999999998743 33 6778887
No 18
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.2e-09 Score=86.87 Aligned_cols=62 Identities=23% Similarity=0.435 Sum_probs=54.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH--cCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE--QGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~--~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++++ .+.+ +..+++|
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 66 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGAR-VLAVPAD 66 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCce-EEEEEcc
Confidence 356799999999999999999999999999999999999888888888876 3555 7777776
No 19
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.4e-09 Score=89.08 Aligned_cols=63 Identities=29% Similarity=0.344 Sum_probs=56.1
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
...+.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++++.+.+ +..+++|
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~-~~~~~~D 97 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD-AMAVPCD 97 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 34577899999999999999999999999999999999998888888888777777 7788776
No 20
>PRK06194 hypothetical protein; Provisional
Probab=98.99 E-value=1.5e-09 Score=87.58 Aligned_cols=62 Identities=23% Similarity=0.370 Sum_probs=54.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..++++..+.+ +..+++|
T Consensus 2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (287)
T PRK06194 2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE-VLGVRTD 63 (287)
T ss_pred cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCe-EEEEECC
Confidence 4567899999999999999999999999999999999988888888888776766 7778776
No 21
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.1e-09 Score=85.48 Aligned_cols=64 Identities=27% Similarity=0.467 Sum_probs=54.9
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++.++++|+++|||+++|||+++|++|+++|++|++.+|+.+ ..++..+++++.+.+ +..+++|
T Consensus 2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D 66 (254)
T PRK06114 2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR-AIQIAAD 66 (254)
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCc-eEEEEcC
Confidence 456788999999999999999999999999999999999764 467777888777777 7777776
No 22
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.98 E-value=1.9e-09 Score=85.60 Aligned_cols=63 Identities=25% Similarity=0.308 Sum_probs=55.7
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.++++|+++|||+++|||+++|++|+++|++|++.+|++++.++..+++++.|.+ +..+++|
T Consensus 5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~-~~~~~~D 67 (255)
T PRK07523 5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLS-AHALAFD 67 (255)
T ss_pred ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCce-EEEEEcc
Confidence 34578999999999999999999999999999999999988888888888777777 7778776
No 23
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.97 E-value=2.1e-09 Score=87.59 Aligned_cols=62 Identities=26% Similarity=0.392 Sum_probs=53.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---------ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---------KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---------~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++|+++||||++|||+++|++|+++|++|++++++. +.+++..+++++.+.+ +..+++|
T Consensus 2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 72 (286)
T PRK07791 2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE-AVANGDD 72 (286)
T ss_pred CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc-eEEEeCC
Confidence 346799999999999999999999999999999998876 6677888888877777 7788777
No 24
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.96 E-value=2.3e-09 Score=84.83 Aligned_cols=62 Identities=26% Similarity=0.358 Sum_probs=54.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.+.+ ...+++|
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 65 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK-AEALACH 65 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 4678899999999999999999999999999999999988888888888777766 7777776
No 25
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.96 E-value=2.3e-09 Score=85.06 Aligned_cols=62 Identities=29% Similarity=0.378 Sum_probs=55.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||++++++|+++|++|++.+|+++++++..++++..+.+ +..+.+|
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 66 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIK-AHAAPFN 66 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEecC
Confidence 4578999999999999999999999999999999999988888888888777766 7777776
No 26
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.96 E-value=2.1e-09 Score=89.86 Aligned_cols=62 Identities=21% Similarity=0.373 Sum_probs=56.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.|.+ +..+++|
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~-~~~v~~D 65 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE-ALAVVAD 65 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEEec
Confidence 4577899999999999999999999999999999999998899999999888887 8888887
No 27
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2.6e-09 Score=85.26 Aligned_cols=62 Identities=19% Similarity=0.303 Sum_probs=53.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.. .+ +..+++|
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGAR-LLAARCD 67 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCce-EEEEEec
Confidence 35789999999999999999999999999999999999988888888887653 35 6677776
No 28
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.94 E-value=3e-09 Score=85.55 Aligned_cols=62 Identities=19% Similarity=0.341 Sum_probs=55.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||++++++|+++|++|++.+|+++..++..+++++.+.+ +..+++|
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE-ALAVKAD 67 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 3578999999999999999999999999999999999988888888888777777 7888877
No 29
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.93 E-value=3.1e-09 Score=85.07 Aligned_cols=60 Identities=22% Similarity=0.330 Sum_probs=50.2
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++ +.+ +.++++|
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 60 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GER-ARFIATD 60 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCe-eEEEEec
Confidence 34578999999999999999999999999999999999987777666554 445 6677776
No 30
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.93 E-value=3.7e-09 Score=86.56 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=54.5
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
.+.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++++. +.+ +.++++|
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D 75 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGAD-VTLQELD 75 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCc-eEEEECC
Confidence 456788999999999999999999999999999999999988888777777654 345 6777776
No 31
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.92 E-value=4.1e-09 Score=83.57 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=56.3
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.++++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++++.+.+ +..+++|
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 68 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA-AEALAFD 68 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence 45688999999999999999999999999999999999988888888888877777 7788876
No 32
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.92 E-value=4.4e-09 Score=83.26 Aligned_cols=60 Identities=20% Similarity=0.387 Sum_probs=53.4
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.+|+++||||++|||+++|++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR-ALAVPTD 62 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCc-eEEEecC
Confidence 56899999999999999999999999999999999988888888888776766 7777776
No 33
>PRK06720 hypothetical protein; Provisional
Probab=98.91 E-value=4.9e-09 Score=80.16 Aligned_cols=62 Identities=24% Similarity=0.395 Sum_probs=54.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++++|+++|||+++|||.++|++|+++|++|++++++++..++..+++++.+.+ ..++++|
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 73 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE-ALFVSYD 73 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 3468999999999999999999999999999999999988888888888766766 7777776
No 34
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.91 E-value=5.4e-09 Score=83.63 Aligned_cols=63 Identities=33% Similarity=0.453 Sum_probs=56.2
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..++++|+++|||+++|||++++++|+++|++|++.+|+++++++..+++++.+.+ +..+++|
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE-AHGYVCD 67 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence 34678999999999999999999999999999999999998888888888877777 8888887
No 35
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.91 E-value=5e-09 Score=82.96 Aligned_cols=62 Identities=29% Similarity=0.443 Sum_probs=55.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++.+|+++|||+++|||.+++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE-ALFVACD 64 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence 3467899999999999999999999999999999999998888888888777777 7788776
No 36
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.91 E-value=4.9e-09 Score=83.04 Aligned_cols=62 Identities=24% Similarity=0.436 Sum_probs=55.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||.+++++|+++|++|++.+|++++.++..+++++.+.+ +..+++|
T Consensus 3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (262)
T PRK13394 3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK-AIGVAMD 64 (262)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCce-EEEEECC
Confidence 3567899999999999999999999999999999999998888888888777776 7778877
No 37
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.91 E-value=3.4e-09 Score=87.44 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=53.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+.+|+++||||++|||.+++++|+++|++|++++|+.++.++..++++..+.+ +.++++|
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 63 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDS-YTIIHID 63 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCc-eEEEEec
Confidence 4457899999999999999999999999999999999998888888887654555 7777776
No 38
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.90 E-value=5.4e-09 Score=84.45 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++||+++||||++ |||+++|++|+++|++|++++|+ ++.++..+++.....+ +..+++|
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~-~~~~~~D 64 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGS-DIVLPCD 64 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCC-ceEeecC
Confidence 46799999999986 99999999999999999999987 4556666777666555 6677776
No 39
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.90 E-value=6.4e-09 Score=82.79 Aligned_cols=62 Identities=21% Similarity=0.400 Sum_probs=52.8
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..++++|+++||||++|||+++|++|+++|++|++.+|+ ++.++..+++++.+.+ +..+++|
T Consensus 10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~D 71 (258)
T PRK06935 10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRK-VTFVQVD 71 (258)
T ss_pred cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCc-eEEEEcC
Confidence 345789999999999999999999999999999999998 5667777777666666 7788877
No 40
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.89 E-value=6.3e-09 Score=81.99 Aligned_cols=63 Identities=19% Similarity=0.377 Sum_probs=53.8
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.++++|+++|||+++|||.+++++|+++|++|++.+|+++..+++.+++++.+.+ ...+.+|
T Consensus 1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (250)
T PRK07774 1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGT-AIAVQVD 63 (250)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 34578899999999999999999999999999999999987777787777766655 6667766
No 41
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.89 E-value=7.2e-09 Score=83.67 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=52.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-------HHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-------NNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-------~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++.+|+++||||++|||+++|++|+++|++|++++|+.+. +++..+++++.+.+ +..+++|
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~D 70 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ-ALPLVGD 70 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCc-eEEEEec
Confidence 45678999999999999999999999999999999997643 45666777776777 8888877
No 42
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.89 E-value=5.6e-09 Score=83.43 Aligned_cols=63 Identities=22% Similarity=0.449 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
+.++++|+++||||++|||+++|++|+++|++|+++++ +++.+++..++++.. +.+ +..+++|
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIK-AKAYPLN 67 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence 45678999999999999999999999999999998865 566677777777654 556 7888877
No 43
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.89 E-value=4.4e-09 Score=86.00 Aligned_cols=63 Identities=27% Similarity=0.390 Sum_probs=52.6
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.. +.+ +..+++|
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~-~~~~~~D 65 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDR-VLTVVAD 65 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCc-EEEEEec
Confidence 34578899999999999999999999999999999999999888888777642 344 5555665
No 44
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.87 E-value=7.3e-09 Score=82.57 Aligned_cols=60 Identities=25% Similarity=0.435 Sum_probs=49.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||+++|++|+++|++|++++|+. .++..+++++.+.+ +..+++|
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~-~~~~~~D 63 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRK-FHFITAD 63 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCe-EEEEEeC
Confidence 357899999999999999999999999999999998864 34555666666766 7788776
No 45
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=7.9e-09 Score=82.99 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=48.4
Q ss_pred CCCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|..+++|+++|||| ++|||+++|++|+++|++|++.+|++ +.++..+++.+..+. ...+++|
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~D 64 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCD 64 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECC
Confidence 34578999999997 67999999999999999999988864 445555666555444 5677777
No 46
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.87 E-value=7.2e-09 Score=83.17 Aligned_cols=63 Identities=13% Similarity=0.199 Sum_probs=54.4
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++++|+++|||+++|||.+++++|+++|++|++++|+++..++..+++.+.+.+ +..+++|
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 66 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE-GLGVSAD 66 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCc-eEEEECC
Confidence 45678999999999999999999999999999999999988777777777766666 6777776
No 47
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.87 E-value=9.8e-09 Score=84.50 Aligned_cols=63 Identities=22% Similarity=0.341 Sum_probs=54.7
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++||+++|||+++|||+++|++|+++|++|++.+++ .+..++..+++++.|.+ +..+++|
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~-~~~~~~D 70 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK-AVAVAGD 70 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCe-EEEEeCC
Confidence 456889999999999999999999999999999999885 45577888888877777 8888877
No 48
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.86 E-value=9.6e-09 Score=81.55 Aligned_cols=61 Identities=15% Similarity=0.283 Sum_probs=53.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++||+++||||++|||+++|++|+++|++|++.+|+++.. +..+++++.+.+ +.++++|
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~D 63 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR-AEFVQVD 63 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc-eEEEEcc
Confidence 357899999999999999999999999999999999988766 667777777777 8888877
No 49
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.85 E-value=1.1e-08 Score=82.02 Aligned_cols=62 Identities=18% Similarity=0.109 Sum_probs=49.6
Q ss_pred CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCc--cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEK--GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~--~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++||+++|||++ +|||+++|++|+++|++|++.+++.+ +.++..+++++.+.+ +..+++|
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP-SLFLPCD 67 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCc-ceEeecC
Confidence 35689999999986 89999999999999999998877543 456666777666555 6677776
No 50
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.85 E-value=8.9e-09 Score=80.95 Aligned_cols=63 Identities=22% Similarity=0.340 Sum_probs=51.9
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D 159 (159)
|.++++|+++||||++|||++++++|+++|++|++.+|++++.++..+++.+.+. + +..+++|
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D 64 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPE-PFAIRFD 64 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCC-cceEEee
Confidence 4567889999999999999999999999999999999999888888888765542 3 4444444
No 51
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.1e-08 Score=80.39 Aligned_cols=62 Identities=26% Similarity=0.344 Sum_probs=54.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||.+++++|+++|++|++.+|++++.++..+++++.+.+ +..+++|
T Consensus 3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (250)
T PRK12939 3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR-AHAIAAD 64 (250)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 4567899999999999999999999999999999999988888888888776766 7777776
No 52
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.85 E-value=9.5e-09 Score=82.23 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=53.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||+++++.|+++|++|++++|++++.++..++++..+.+ +.++++|
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 67 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRR-AHVVAAD 67 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 467899999999999999999999999999999999988888888888766666 7777776
No 53
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.85 E-value=9.6e-09 Score=82.24 Aligned_cols=59 Identities=14% Similarity=0.303 Sum_probs=51.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCcc-HHHHHHHHHHcCC-CeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKG-NNETKQMLEEQGY-KNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~-~~~~~~ei~~~g~-~~v~~~~~D 159 (159)
.+|+++||||++|||+++|++++++| ++|++++|+++. +++..+++++.+. + +.++++|
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~-v~~~~~D 68 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASS-VEVIDFD 68 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCc-eEEEEec
Confidence 47899999999999999999999995 899999999886 8888888887664 5 7788877
No 54
>PRK08643 acetoin reductase; Validated
Probab=98.84 E-value=1.1e-08 Score=81.14 Aligned_cols=58 Identities=29% Similarity=0.455 Sum_probs=52.3
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++|||+++|||.+++++|+++|++|++.+|+.+..++..+++++.+.+ +..+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 59 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK-AIAVKAD 59 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 689999999999999999999999999999999988888888888776766 7788877
No 55
>PRK09242 tropinone reductase; Provisional
Probab=98.83 E-value=1.1e-08 Score=81.25 Aligned_cols=62 Identities=24% Similarity=0.420 Sum_probs=53.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++++. +.+ +..+++|
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D 68 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE-VHGLAAD 68 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCe-EEEEECC
Confidence 4578999999999999999999999999999999999988888888887665 455 7777776
No 56
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.83 E-value=1.3e-08 Score=79.92 Aligned_cols=62 Identities=29% Similarity=0.410 Sum_probs=53.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++++++|||+++|||..++++|+++|++|++++|+.++.++..++++..+.+ +..+++|
T Consensus 3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (239)
T PRK07666 3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK-VVIATAD 64 (239)
T ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCe-EEEEECC
Confidence 3467899999999999999999999999999999999988888888888766666 7777776
No 57
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.83 E-value=1.3e-08 Score=80.25 Aligned_cols=60 Identities=27% Similarity=0.443 Sum_probs=53.9
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|+++|||++++||.+++++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 61 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK-AIGVAMD 61 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 46799999999999999999999999999999999998888888888777777 7788876
No 58
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.83 E-value=1.4e-08 Score=80.68 Aligned_cols=60 Identities=25% Similarity=0.349 Sum_probs=50.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||+++|++|+++|++|++++|++ ..++..++++..+.+ +..+++|
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~-~~~~~~D 64 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGE-ALALTAD 64 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCe-EEEEEEe
Confidence 46789999999999999999999999999999999985 355666777666666 7777776
No 59
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.82 E-value=1.6e-08 Score=80.37 Aligned_cols=61 Identities=28% Similarity=0.509 Sum_probs=54.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+.+|+++||||++|||.+++++|+++|+++++.+|+.+..++..+++++.+.+ +..+.+|
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 68 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD 68 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 467999999999999999999999999999999999988888888888777766 7777776
No 60
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.81 E-value=1.6e-08 Score=81.07 Aligned_cols=62 Identities=18% Similarity=0.099 Sum_probs=45.8
Q ss_pred CCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++||+++|||++ +|||+++|++|+++|++|++++|+++.. +..+++.++... +..+++|
T Consensus 5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~~-~~~~~~D 68 (258)
T PRK07533 5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELDA-PIFLPLD 68 (258)
T ss_pred ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhcc-ceEEecC
Confidence 456789999999998 5999999999999999999999986432 223333333223 4566666
No 61
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.81 E-value=1.4e-08 Score=80.48 Aligned_cols=58 Identities=21% Similarity=0.379 Sum_probs=51.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
||+++|||+++|||++++++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 58 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ-VLTVQMD 58 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence 589999999999999999999999999999999988888888888766666 7778776
No 62
>PLN02253 xanthoxin dehydrogenase
Probab=98.81 E-value=1.2e-08 Score=82.23 Aligned_cols=62 Identities=19% Similarity=0.375 Sum_probs=51.0
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..++++|+++||||++|||++++++|+++|++|++.+|+++..++..+++.. +.+ +..+++|
T Consensus 13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~D 74 (280)
T PLN02253 13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPN-VCFFHCD 74 (280)
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCc-eEEEEee
Confidence 3467899999999999999999999999999999999988777777666632 345 6677776
No 63
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.81 E-value=1.6e-08 Score=80.15 Aligned_cols=60 Identities=25% Similarity=0.391 Sum_probs=49.7
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|+++|||+++|||.++|++|+++|++|++.+ ++++..++..+++++.+.+ +..+++|
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS-AFSIGAN 62 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEecc
Confidence 4689999999999999999999999999999875 5666677777777766666 6666665
No 64
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.81 E-value=1.3e-08 Score=81.26 Aligned_cols=59 Identities=24% Similarity=0.451 Sum_probs=47.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++ +.+ +..+++|
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 60 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDH-VLVVEGD 60 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-ceEEEcc
Confidence 3467899999999999999999999999999999999987766655543 334 5556655
No 65
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.80 E-value=1.7e-08 Score=79.87 Aligned_cols=62 Identities=26% Similarity=0.367 Sum_probs=54.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++.+|+++|||+++|||++++++|+++|++|++++|++++++++.++++..+.+ +..+.+|
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 66 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA-AHVVSLD 66 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence 4578999999999999999999999999999999999998888888888766666 7777665
No 66
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2e-08 Score=79.86 Aligned_cols=61 Identities=28% Similarity=0.425 Sum_probs=50.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||++++++|+++|++|++++|+++ .++..+++.+.+.+ +..+++|
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~-~~~~~~D 62 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHR-CTAVVAD 62 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCc-eEEEECC
Confidence 4567899999999999999999999999999999999874 45555666655666 7777776
No 67
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=2.4e-08 Score=80.14 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=46.2
Q ss_pred CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCc---cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEK---GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~---~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++||+++||||+ +|||+++|++|+++|++|++.+|+.. +++++.++++ +.+ +..+++|
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~-~~~~~~D 67 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQE-SLLLPCD 67 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCc-eEEEecC
Confidence 45779999999997 89999999999999999999987642 3344444332 455 7778877
No 68
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.8e-08 Score=78.31 Aligned_cols=62 Identities=23% Similarity=0.289 Sum_probs=51.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||++++++|+++|++|++.+|+.+ ..++..++++..+.+ +..+++|
T Consensus 2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D 64 (248)
T PRK07806 2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR-ASAVGAD 64 (248)
T ss_pred CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCc-eEEEEcC
Confidence 3467899999999999999999999999999999988753 456666677666666 7777776
No 69
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.79 E-value=1.3e-08 Score=84.07 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=51.0
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+|+++|||+++|||+++|++|+++| ++|++++|++++.+++.++++..+.+ +..+++|
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 61 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDS-YTIMHLD 61 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCe-EEEEEcC
Confidence 47899999999999999999999999 99999999998888888877655555 6777776
No 70
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.8e-08 Score=80.44 Aligned_cols=60 Identities=22% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++++++||||++|||++++++++++|++|++++|+++..++..+++ +.+.+ +.++++|
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~D 61 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGR-HRWVVAD 61 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCc-eEEEEcc
Confidence 357899999999999999999999999999999999988888777777 33455 7777776
No 71
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.79 E-value=2.3e-08 Score=78.39 Aligned_cols=61 Identities=30% Similarity=0.475 Sum_probs=53.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++++|.+++++|+++|++|++++|+.++.++..+++++.+.+ +..+.+|
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 63 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK-ARARQVD 63 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 457899999999999999999999999999999999988777777788777766 7777776
No 72
>PRK06128 oxidoreductase; Provisional
Probab=98.79 E-value=2.7e-08 Score=81.40 Aligned_cols=63 Identities=27% Similarity=0.384 Sum_probs=52.3
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+..+++|+++||||++|||+++|++|+++|++|++.+++.+ ..++..+++++.+.+ +..+++|
T Consensus 50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 114 (300)
T PRK06128 50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK-AVALPGD 114 (300)
T ss_pred ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCe-EEEEecC
Confidence 44578999999999999999999999999999998877543 456677777777777 7888877
No 73
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.2e-08 Score=79.71 Aligned_cols=61 Identities=25% Similarity=0.322 Sum_probs=52.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++++. +.+ +..+++|
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D 65 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVD-VAVHALD 65 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEec
Confidence 467899999999999999999999999999999999988888888888765 445 6777776
No 74
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.78 E-value=2.3e-08 Score=78.56 Aligned_cols=61 Identities=23% Similarity=0.450 Sum_probs=53.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++++++|||+++|||.++++.++++|++|++++|++++.++..++++..+.+ +..+++|
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE-VRGYAAN 62 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence 367899999999999999999999999999999999988888888888777776 7777776
No 75
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.78 E-value=2e-08 Score=79.88 Aligned_cols=61 Identities=21% Similarity=0.281 Sum_probs=53.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||.++|++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~-~~~~~~D 69 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGID-ALWIAAD 69 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence 467899999999999999999999999999999999988888888788776666 7777776
No 76
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.3e-08 Score=78.78 Aligned_cols=60 Identities=28% Similarity=0.478 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||.+++++|+++|++|++.+|+.+..++..++++ .+.+ +..+++|
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~D 61 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGR-AFARQGD 61 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCe-EEEEEcC
Confidence 4678999999999999999999999999999999999887777777665 4555 6777776
No 77
>PRK05717 oxidoreductase; Validated
Probab=98.78 E-value=2.4e-08 Score=79.36 Aligned_cols=61 Identities=23% Similarity=0.350 Sum_probs=48.8
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+..+++||+++|||+++|||+++|++|+++|++|++++++.++.++..+++ +.+ +.++++|
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~-~~~~~~D 64 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GEN-AWFIAMD 64 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCc-eEEEEcc
Confidence 345678999999999999999999999999999999999876655544332 444 6666766
No 78
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.78 E-value=1.1e-08 Score=75.95 Aligned_cols=57 Identities=30% Similarity=0.457 Sum_probs=49.6
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC--CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID--EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~--~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||++++++|+++|+ +|++++|+ .+..+++.++++..+.+ +..+++|
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~-~~~~~~D 60 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAK-ITFIECD 60 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSE-EEEEESE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccc-ccccccc
Confidence 6899999999999999999999966 67778888 67788888888888877 8888876
No 79
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.77 E-value=3.2e-08 Score=77.96 Aligned_cols=59 Identities=31% Similarity=0.469 Sum_probs=48.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||.++|++|+++|++|++++|++ .++..+++++.+.+ +..+++|
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~-~~~~~~D 60 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRR-FLSLTAD 60 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCc-eEEEECC
Confidence 46799999999999999999999999999999999875 34555666666666 7777776
No 80
>PRK05599 hypothetical protein; Provisional
Probab=98.77 E-value=1.7e-08 Score=80.36 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=49.4
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++||||++|||+++|++|+ +|++|++++|++++++++.+++++.+.+.+..+++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 57 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFD 57 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcc
Confidence 478999999999999999999 599999999999999999999987764216677877
No 81
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=2.9e-08 Score=79.70 Aligned_cols=60 Identities=22% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++||+++|||+++ |||+++|++|+++|++|++.+|++ +.++..+++.++.+. ...+++|
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~D 66 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELD 66 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEcc
Confidence 46789999999997 999999999999999999998874 345555666544222 3345666
No 82
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=2.2e-08 Score=79.96 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=45.8
Q ss_pred CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++||+++||||+ +|||+++|++|+++|++|++.+|++ +.++..+++. +.+ +..+++|
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~-~~~~~~D 63 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEE-DLLVECD 63 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCc-eeEEeCC
Confidence 4679999999999 8999999999999999999999983 4444444442 234 6677777
No 83
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.77 E-value=2.9e-08 Score=78.53 Aligned_cols=63 Identities=27% Similarity=0.450 Sum_probs=51.5
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.++++++++|||+++|||.++|++|+++|++|++. .|+.++.++..++++..+.+ +..+++|
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGK-AFLIEAD 64 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 345678999999999999999999999999999775 67777777777777665656 7777776
No 84
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.76 E-value=2e-08 Score=80.23 Aligned_cols=58 Identities=26% Similarity=0.508 Sum_probs=46.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||+++|++|+++|++|++++|+++..+++.++ .+.+ +..+++|
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~-~~~~~~D 59 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDA-VVGVEGD 59 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCc-eEEEEec
Confidence 36789999999999999999999999999999999987666554432 2444 6666665
No 85
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.76 E-value=2.7e-08 Score=78.13 Aligned_cols=60 Identities=25% Similarity=0.437 Sum_probs=51.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++++++|||+++|||.+++++|+++|++|++.+|++++.++..+++++ +.+ +.++++|
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~D 61 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGR-AIAVAAD 61 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCe-EEEEECC
Confidence 36789999999999999999999999999999999998887777777654 555 6777776
No 86
>PRK07985 oxidoreductase; Provisional
Probab=98.76 E-value=3.7e-08 Score=80.65 Aligned_cols=63 Identities=22% Similarity=0.329 Sum_probs=51.1
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC--ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE--KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~--~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.++++|+++|||+++|||+++|++|+++|++|++.+++. +..+++.+.+++.+.+ +..+++|
T Consensus 44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 108 (294)
T PRK07985 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK-AVLLPGD 108 (294)
T ss_pred CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCe-EEEEEcc
Confidence 3457899999999999999999999999999999988753 3456666666666666 7777776
No 87
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=2.7e-08 Score=78.37 Aligned_cols=60 Identities=25% Similarity=0.465 Sum_probs=52.0
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.+|+++||||++|||++++++|+++|++|++ .+|+.++.++..+++++.+.+ +..+++|
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK-ALAVKAN 62 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 45789999999999999999999999999876 578887788888888877777 7788777
No 88
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.75 E-value=3e-08 Score=78.76 Aligned_cols=59 Identities=25% Similarity=0.385 Sum_probs=48.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.+.+|+++|||+++|||.++|++|+++|++|++++|+.+..++..+++ +.+ +..+++|
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 60 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPA-AIAVSLD 60 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCc-eEEEEcc
Confidence 4577899999999999999999999999999999999987777665544 334 5666665
No 89
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.75 E-value=3.5e-08 Score=77.54 Aligned_cols=59 Identities=24% Similarity=0.274 Sum_probs=52.1
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++|+++|||+++|+|+.++++|+++|++|++++|++++.+++.+++++.+.+ +..+++|
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK-AAAYSID 63 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCc-EEEEEcc
Confidence 4689999999999999999999999999999999988888888888776666 7788876
No 90
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.75 E-value=1.7e-08 Score=80.43 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=48.7
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++||||++|||++++++|+++|++|++++|+.+++++..++++..+ + +..+++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~D 58 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-R-VSVYAAD 58 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-e-eEEEEcC
Confidence 4789999999999999999999999999999999887777777665444 5 7777776
No 91
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.74 E-value=2.9e-08 Score=78.24 Aligned_cols=58 Identities=26% Similarity=0.345 Sum_probs=50.3
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
+|+++||||++|||++++++|+++|++|++.+|++++.++..+++.+. +.+ +..+++|
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 61 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIK-VAVAALD 61 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCce-EEEEEcC
Confidence 689999999999999999999999999999999988888887777654 445 7777776
No 92
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.74 E-value=3.3e-08 Score=78.78 Aligned_cols=61 Identities=26% Similarity=0.467 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||+++|++|+++|++|++.+|+ ++..++..+++++.+.+ +..+.+|
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 65 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGE-AIAVKGD 65 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe-EEEEEec
Confidence 4689999999999999999999999999999998885 44566777778776766 7777776
No 93
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.74 E-value=3.2e-08 Score=77.75 Aligned_cols=58 Identities=26% Similarity=0.383 Sum_probs=46.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||++++++|+++|++|++.+|+++..++..+++ +.+ +..+++|
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 60 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GES-ALVIRAD 60 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCc-eEEEEec
Confidence 467899999999999999999999999999999999876655554443 445 5666665
No 94
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.73 E-value=3.9e-08 Score=79.66 Aligned_cols=59 Identities=20% Similarity=0.141 Sum_probs=44.3
Q ss_pred CCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|+++|||+++ |||+++|++|+++|++|++++|+++..++ .+++.+..+. ...+++|
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~D 65 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCD 65 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCC
Confidence 6789999999996 99999999999999999999988644333 3344332223 3456776
No 95
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.73 E-value=2.5e-08 Score=79.95 Aligned_cols=57 Identities=25% Similarity=0.323 Sum_probs=46.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++++++||||++|||++++++|+++|++|++.+|+++++++..+++. + +..+++|
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~-~~~~~~D 58 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----L-VVGGPLD 58 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----c-ceEEEcc
Confidence 4568999999999999999999999999999999999877776665543 3 4455554
No 96
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.73 E-value=2.7e-08 Score=79.34 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=48.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|||+++|||+++|++|+++|++|++.+|+++++++..+++++.+ + +..+++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~D 56 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-E-VYAVKAD 56 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-C-ceEEEcC
Confidence 68999999999999999999999999999999988888888887654 5 6777776
No 97
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=4.6e-08 Score=78.04 Aligned_cols=63 Identities=16% Similarity=0.323 Sum_probs=49.8
Q ss_pred CCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCC-----------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDID-----------EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~-----------~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.+++||+++|||++ +|||+++|++|+++|++|++.+++ .+..++..+++++.|.+ +..+++|
T Consensus 1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D 76 (256)
T PRK12859 1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVK-VSSMELD 76 (256)
T ss_pred CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 346889999999999 499999999999999999987542 12234556677777777 8888887
No 98
>PRK09186 flagellin modification protein A; Provisional
Probab=98.72 E-value=4.5e-08 Score=77.34 Aligned_cols=61 Identities=31% Similarity=0.437 Sum_probs=50.2
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
+++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++... +.+.+.++++|
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D 63 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELD 63 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEec
Confidence 46899999999999999999999999999999999998888888887543 32214455666
No 99
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.72 E-value=5.5e-08 Score=75.81 Aligned_cols=61 Identities=28% Similarity=0.432 Sum_probs=53.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++.+|+++|||+++|+|..++++|+++|++|++++|++++.++..++++..+.+ +..+.+|
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE-ARVLVFD 62 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc-eEEEEcc
Confidence 456789999999999999999999999999999999988888888888777777 7777776
No 100
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.71 E-value=5.7e-08 Score=79.40 Aligned_cols=64 Identities=33% Similarity=0.501 Sum_probs=52.9
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+.++++|+++|||+++|||.++|++|+++|++|++++|+.+ ..++..++++..+.+ +.++.+|
T Consensus 40 ~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 104 (290)
T PRK06701 40 GSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-CLLIPGD 104 (290)
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCe-EEEEEcc
Confidence 345788999999999999999999999999999999999854 455666666666666 7777776
No 101
>PRK05855 short chain dehydrogenase; Validated
Probab=98.71 E-value=3.8e-08 Score=86.02 Aligned_cols=62 Identities=34% Similarity=0.633 Sum_probs=56.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+.+++++||||++|||+++|++|+++|++|++++|+.++++++.+++++.|.+ +..+++|
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 372 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV-AHAYRVD 372 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 4567899999999999999999999999999999999998899998888887877 8888887
No 102
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.71 E-value=4.9e-08 Score=76.77 Aligned_cols=60 Identities=17% Similarity=0.455 Sum_probs=52.2
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|.++||||++|||.+++++|+++|++|++.+|+.+..+++.+++++.+.+ +..+++|
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~d 60 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN-AQAFACD 60 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 35799999999999999999999999999999999988888887777766666 7777776
No 103
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.71 E-value=4e-08 Score=88.04 Aligned_cols=62 Identities=26% Similarity=0.406 Sum_probs=55.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++||||++|||++++++|+++|++|++++|+++.+++..++++..+.+ +..+++|
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 428 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT-AHAYTCD 428 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence 3577999999999999999999999999999999999998888888888777777 8888877
No 104
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.71 E-value=5.6e-08 Score=75.98 Aligned_cols=60 Identities=23% Similarity=0.356 Sum_probs=50.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+.+++++|||+++++|.+++++|+++|++|++++|++++.++..+++++. .+ +..+++|
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~D 62 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GN-VLGLAAD 62 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-Cc-EEEEEcc
Confidence 456899999999999999999999999999999999988887777777654 44 6677765
No 105
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.70 E-value=3.8e-08 Score=81.75 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=44.5
Q ss_pred CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040 97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
.+++||+++|||+ ++|||+++|++|+++|++|++ +|+.++++++.+++++
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~ 56 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRR 56 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhc
Confidence 3488999999999 899999999999999999998 7888888888877753
No 106
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.70 E-value=7.8e-08 Score=76.50 Aligned_cols=60 Identities=25% Similarity=0.406 Sum_probs=48.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++||+++|||+++|||+++|++|+++|++|++.+++. .++..+++++.+.+ +..+++|
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~-~~~~~~D 65 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRR-FLSLTAD 65 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCe-EEEEECC
Confidence 457899999999999999999999999999999887754 34555666655666 7777776
No 107
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.70 E-value=5e-08 Score=78.25 Aligned_cols=57 Identities=28% Similarity=0.473 Sum_probs=51.6
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||++++++|+++|++|++.+|+.+++++..+++++.+.+ +..+++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 57 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD-GFYQRCD 57 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence 47899999999999999999999999999999998888888888877777 8888877
No 108
>PRK12743 oxidoreductase; Provisional
Probab=98.70 E-value=5.7e-08 Score=77.33 Aligned_cols=59 Identities=20% Similarity=0.299 Sum_probs=50.1
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++|+++||||++|||++++++|+++|++|+++++ +.+..++..++++..+.+ +..+++|
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 60 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR-AEIRQLD 60 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc-eEEEEcc
Confidence 3689999999999999999999999999988764 556677777888777777 8888876
No 109
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.70 E-value=5.6e-08 Score=77.11 Aligned_cols=62 Identities=24% Similarity=0.407 Sum_probs=52.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++|+++|||+++|||..++++|+++|++ |++++|+.++.++..+++++.+.+ +..+.+|
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 64 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-AVFVQAD 64 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence 4577899999999999999999999999999 999999887777777777666666 6667766
No 110
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.70 E-value=7.3e-08 Score=77.72 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=52.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
...+|+++|||+++|||++++++|+++|++|++.+|+.+..++..++++..+.+ +..+++|
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE-AVAFPLD 67 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 456789999999999999999999999999999999887777777777766766 7777776
No 111
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.69 E-value=7.4e-08 Score=76.65 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=51.1
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+....+|+++|||+++|||++++++|+++|++|++.++ +.+..+++.++++..+.+ +..+++|
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRR-AVALQAD 67 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 33456899999999999999999999999999988766 455566777777766766 7778776
No 112
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.69 E-value=3.2e-08 Score=79.25 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=45.2
Q ss_pred CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCC--ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDE--KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~--~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+ ++|||+++|++|+++|++|++.+|+. +..+++.+++ +.+ +.++++|
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~-~~~~~~D 65 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEP-APVLELD 65 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCC-CcEEeCC
Confidence 4577899999999 89999999999999999999998864 3344444433 224 5666766
No 113
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=2.3e-08 Score=79.04 Aligned_cols=48 Identities=33% Similarity=0.464 Sum_probs=43.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
++.|.+++||||++|||+++|++|.+.|-+|++++|++++++++.++.
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~ 49 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN 49 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC
Confidence 357889999999999999999999999999999999998888776654
No 114
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.69 E-value=6.9e-08 Score=76.00 Aligned_cols=62 Identities=18% Similarity=0.340 Sum_probs=51.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..+++|+++|||+++|||.++|++|+++|++|++.++ +++..++..++++..+.+ +.++++|
T Consensus 2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 64 (247)
T PRK12935 2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD-VYAVQAD 64 (247)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 3467899999999999999999999999999987654 456667777777766767 7788876
No 115
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.68 E-value=8.6e-08 Score=76.45 Aligned_cols=62 Identities=27% Similarity=0.417 Sum_probs=52.0
Q ss_pred CCCCCCeEEEeCCCC-CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-C-CCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGN-GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-G-YKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~-GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g-~~~v~~~~~D 159 (159)
..+++|+++||||++ |||+++++.|+++|++|++.+|+.++.++..+++++. + .+ +..+++|
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 77 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGR-VEAVVCD 77 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCce-EEEEEcc
Confidence 346789999999985 9999999999999999999999988888888888763 4 34 6677776
No 116
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.68 E-value=5.5e-08 Score=76.64 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=49.2
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D 159 (159)
|+++||||++|||.+++++|+++|++|++++|++++.++..++++..+ .+ +.++++|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 59 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVA-VSTHELD 59 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCe-EEEEecC
Confidence 689999999999999999999999999999999888887777776553 45 7777776
No 117
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.68 E-value=7.1e-08 Score=75.90 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=48.6
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++|+++|||+++|||+++|++|+++|++|++. +++.++.++..++++..+.+ +..+++|
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 61 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD-FIASEGN 61 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCc-EEEEEcC
Confidence 357999999999999999999999999998884 45555666667777666766 7777776
No 118
>PRK06196 oxidoreductase; Provisional
Probab=98.67 E-value=4.8e-08 Score=80.47 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=43.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
++.+|+++||||++|||+++|++|+++|++|++++|++++.++..+++
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 467899999999999999999999999999999999988777766665
No 119
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.67 E-value=7.3e-08 Score=78.30 Aligned_cols=59 Identities=17% Similarity=0.272 Sum_probs=43.7
Q ss_pred CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
.+++|+++||||+ +|||+++|++|+++|++|++++|+++ .++..+++.++ +.+ ..+++|
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~--~~~~~D 63 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD--YVYELD 63 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc--eEEEec
Confidence 3578999999997 89999999999999999999999853 33334444333 322 356665
No 120
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.67 E-value=7.6e-08 Score=77.34 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
++|+++||||++|+|.+++++|+++|++|++++|+.+..++..+++...+ .+ +.++.+|
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 62 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQN-IKVQQLD 62 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCc-eeEEecC
Confidence 57899999999999999999999999999999999888887777766543 35 6777776
No 121
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.66 E-value=9.6e-08 Score=74.72 Aligned_cols=61 Identities=30% Similarity=0.481 Sum_probs=52.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||.+++++|+++|++|++. +|+++..++..++++..+.+ +..+.+|
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD-AIAVKAD 63 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 4678999999999999999999999999999998 99888777777777766666 7777776
No 122
>KOG1200|consensus
Probab=98.66 E-value=3.1e-08 Score=77.91 Aligned_cols=60 Identities=22% Similarity=0.369 Sum_probs=51.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++.|.+++|||++|||++++..|+++|++|+++|++...+++++..+...| + ...++||
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~-h~aF~~D 70 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-D-HSAFSCD 70 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-c-cceeeec
Confidence 4567899999999999999999999999999999999988888888775443 3 5677776
No 123
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.66 E-value=8.4e-08 Score=77.74 Aligned_cols=60 Identities=13% Similarity=0.034 Sum_probs=43.9
Q ss_pred CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++|+++|||++ +|||+++|++|+++|++|++++|++. .++..+++.++-+. ...+++|
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~-~~~~~~D 68 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA-FVAGHCD 68 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC-ceEEecC
Confidence 4578999999997 89999999999999999999988642 33333444333223 4456666
No 124
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.66 E-value=8.6e-08 Score=75.71 Aligned_cols=64 Identities=30% Similarity=0.403 Sum_probs=51.7
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
...+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++++.+...+..+.+|
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d 70 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEec
Confidence 3457899999999999999999999999999999999998888888777776543214455443
No 125
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.65 E-value=7e-08 Score=76.92 Aligned_cols=56 Identities=21% Similarity=0.382 Sum_probs=49.0
Q ss_pred eEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
+++|||+++|||+++|++|++ +|++|++.+|++++++++.+++++. +.+ +..+++|
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-v~~~~~D 63 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLR-VVRVSLD 63 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCce-EEEEEec
Confidence 689999999999999999997 7999999999999999998888763 445 7777776
No 126
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.65 E-value=7.3e-08 Score=78.02 Aligned_cols=56 Identities=23% Similarity=0.446 Sum_probs=49.0
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++|||+ +|||+++|++|+ +|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 57 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFD-VSTQEVD 57 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEee
Confidence 689999998 699999999996 8999999999988888888888776777 7788877
No 127
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1.1e-07 Score=74.50 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=50.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++||||++|||+++|+.|+++|+++++++++. +..++..+++++.+.+ +..+++|
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGR-AIAVQAD 63 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence 46789999999999999999999999999998877654 4466677777776776 7888776
No 128
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.64 E-value=9.6e-08 Score=75.81 Aligned_cols=58 Identities=12% Similarity=0.217 Sum_probs=49.7
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
+|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++++.. .+ +..+.+|
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 61 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGM-AYGFGAD 61 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCce-eEEEEcc
Confidence 6899999999999999999999999999999999888888877776543 35 6777776
No 129
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.62 E-value=9.2e-08 Score=75.85 Aligned_cols=40 Identities=30% Similarity=0.533 Sum_probs=36.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
+++++|+++||||++|||++++++|+++|++|++++|+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~ 41 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP 41 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3578999999999999999999999999999999998764
No 130
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.61 E-value=1.4e-07 Score=73.34 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=44.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g 149 (159)
.++++|+++|||++++||..++++|+++|++|++++|++++.++..+++...+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~ 55 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA 55 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC
Confidence 35678999999999999999999999999999999998877666666554433
No 131
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.61 E-value=1.6e-07 Score=74.65 Aligned_cols=61 Identities=20% Similarity=0.420 Sum_probs=47.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||.++|++|+++|++|++.+++ .+..++..+++++.+.+ +..+++|
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 69 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAK-AVAFQAD 69 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCc-EEEEecC
Confidence 4678999999999999999999999999997766543 23455566666666666 7777776
No 132
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.60 E-value=1.7e-07 Score=73.31 Aligned_cols=60 Identities=20% Similarity=0.308 Sum_probs=49.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|||..+++.++++|++|++.+|++++.++..+++...+ + +..+++|
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~D 61 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-N-IHYVVGD 61 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C-eEEEECC
Confidence 3578999999999999999999999999999999999877777666665433 4 6666766
No 133
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.7e-07 Score=73.36 Aligned_cols=62 Identities=23% Similarity=0.376 Sum_probs=48.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++++++|||+++|||+++|++|+++|++|++.++. ++..++..++++..+.+ +..+.+|
T Consensus 2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 67 (249)
T PRK12827 2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK-ALGLAFD 67 (249)
T ss_pred CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 34668899999999999999999999999999987653 34445555566555666 7777776
No 134
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.2e-07 Score=74.91 Aligned_cols=58 Identities=22% Similarity=0.325 Sum_probs=48.9
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++||||++|||++++++|+++|++|++.+|+++..++..+..+..+.+ +..+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 59 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA-LRVEKLD 59 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-ceEEEee
Confidence 578999999999999999999999999999999887777777666666655 6666665
No 135
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.4e-07 Score=75.03 Aligned_cols=58 Identities=28% Similarity=0.405 Sum_probs=50.6
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++++||||++|||+++++.|+++|++|++++|++++.++..++++..+.+ +..+.+|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 58 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE-ALVVPTD 58 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 468999999999999999999999999999999988888887778776666 7777776
No 136
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.59 E-value=1.6e-07 Score=73.96 Aligned_cols=58 Identities=24% Similarity=0.390 Sum_probs=50.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|.++|||+++++|++++++|+++|++|++++|+.+..++..++++..+.+ +..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D 58 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGS-VIYLVAD 58 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence 478999999999999999999999999999999988888887777666666 7777776
No 137
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.59 E-value=1.6e-07 Score=74.14 Aligned_cols=57 Identities=26% Similarity=0.505 Sum_probs=50.2
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++|||+++|||.+++++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 57 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK-AVAYKLD 57 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence 68999999999999999999999999999999988888888888776766 7777776
No 138
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.59 E-value=2.2e-07 Score=73.79 Aligned_cols=61 Identities=21% Similarity=0.317 Sum_probs=47.8
Q ss_pred CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCC-----------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDID-----------EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~-----------~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++ |||.++|++|+++|++|++.+|+ .+...+..+++++.+.+ +..+++|
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 75 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVR-CEHMEID 75 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCe-EEEEECC
Confidence 45789999999994 99999999999999999999987 22223355566656666 7777776
No 139
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.58 E-value=1.8e-07 Score=75.18 Aligned_cols=38 Identities=26% Similarity=0.299 Sum_probs=33.7
Q ss_pred CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
..+++|+++|||| ++|||+++|++|+++|++|++.++.
T Consensus 2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 3467899999996 6899999999999999999998765
No 140
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.8e-07 Score=75.02 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
++++|.++|||+++|||.+++++|+++|++|++++|++++.++..+++.+.+ .+ +..+++|
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D 66 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGA-VRYEPAD 66 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCc-eEEEEcC
Confidence 3678999999999999999999999999999999999877777777766542 34 6666666
No 141
>PRK09135 pteridine reductase; Provisional
Probab=98.58 E-value=2.4e-07 Score=72.59 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=47.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQG-YKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g-~~~v~~~~~D 159 (159)
..++++++|||+++|||+.++++|+++|++|++++|+ ++..++..++++..+ .. +..+++|
T Consensus 3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 65 (249)
T PRK09135 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGS-AAALQAD 65 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCc-eEEEEcC
Confidence 3567899999999999999999999999999999986 444566666665443 34 6666665
No 142
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.2e-07 Score=75.37 Aligned_cols=55 Identities=29% Similarity=0.339 Sum_probs=46.9
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||++++++|+++|++|++.+|+.+.+++..+++. +.+ +.++++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~-~~~~~~D 56 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGN-AWTGALD 56 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCc-eEEEEec
Confidence 689999999999999999999999999999999887777766554 445 6777776
No 143
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.57 E-value=1.4e-07 Score=75.80 Aligned_cols=58 Identities=24% Similarity=0.230 Sum_probs=47.8
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||+++|++|+++|++|++++|+++..++..++++..+.+....+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 58 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALD 58 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEee
Confidence 4799999999999999999999999999999998888888888876655413345555
No 144
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.57 E-value=2.4e-07 Score=84.42 Aligned_cols=106 Identities=24% Similarity=0.316 Sum_probs=70.6
Q ss_pred ccccccchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCC
Q psy2040 51 FTDFSTSWSQSMTALSIILSELILL----IIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKV 126 (159)
Q Consensus 51 ~~~~~~~~~~~m~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga 126 (159)
..|++.++.+.|... .-+..+..+ .+.+-||-+.. .+....++..++.+|+++||||++|||+++|++|+++|+
T Consensus 362 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~eyw~~e~-~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga 439 (676)
T TIGR02632 362 AREFYVNAINVMRGA-EAVSEYVSLPEQEAFDIEYWPLEE-AKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGA 439 (676)
T ss_pred hHHHHHHHHHHHhhh-hcccceecCchhhccchhhhhhhH-HhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC
Confidence 346666666655542 222222222 33334554443 333222334568899999999999999999999999999
Q ss_pred EEEEEcCCCccHHHHHHHHHHc-C-CCeEEEEecC
Q psy2040 127 TLVCWDIDEKGNNETKQMLEEQ-G-YKNIHTYKRS 159 (159)
Q Consensus 127 ~Vvi~~r~~~~~~~~~~ei~~~-g-~~~v~~~~~D 159 (159)
+|++.+|+.+.+++..+++++. + .+ +..+++|
T Consensus 440 ~Vvi~~r~~~~~~~~~~~l~~~~~~~~-~~~v~~D 473 (676)
T TIGR02632 440 HVVLADLNLEAAEAVAAEINGQFGAGR-AVALKMD 473 (676)
T ss_pred EEEEEeCCHHHHHHHHHHHHhhcCCCc-EEEEECC
Confidence 9999999988888777777643 2 24 6667776
No 145
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.56 E-value=2.4e-07 Score=72.47 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=47.0
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|.++++|+++|||+++|||++++++|+++|+.|++.+++.+++++..+++ +.+ +..+.+|
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~-~~~~~~D 60 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GER-VKIFPAN 60 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc-eEEEEcc
Confidence 34577899999999999999999999999999998888877666654433 334 5555554
No 146
>PRK06484 short chain dehydrogenase; Validated
Probab=98.56 E-value=1.6e-07 Score=82.16 Aligned_cols=57 Identities=26% Similarity=0.419 Sum_probs=47.7
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++|+++|||+++|||+++|++|+++|++|++++|+.+++++..+++ +.+ +..+++|
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 59 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPD-HHALAMD 59 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eeEEEec
Confidence 46899999999999999999999999999999999987777665554 445 6666665
No 147
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.56 E-value=2.3e-07 Score=73.00 Aligned_cols=58 Identities=17% Similarity=0.253 Sum_probs=47.3
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++|||+++|||.+++++|+++|++|++.++ +++..++..+++++.+.+ +..+++|
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 60 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGE-ALAVAAD 60 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCc-EEEEEec
Confidence 578999999999999999999999999988874 455566666777666666 7777776
No 148
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.55 E-value=2.6e-07 Score=72.75 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=48.8
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.|+++||||++|||.++++.|+++|++|++.+ |+++..++..++++..+.+ +..+++|
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 60 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR-ACVVAGD 60 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence 47899999999999999999999999998764 6667777777778776666 7888876
No 149
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=3.2e-07 Score=72.21 Aligned_cols=62 Identities=27% Similarity=0.387 Sum_probs=48.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++.+++++||||++|||++++++|+++|++|++..+ +.+..++..+++++.+.+ +..+.+|
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE-GIGVLAD 64 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe-eEEEEec
Confidence 4567899999999999999999999999999887665 444455555666666666 6666665
No 150
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=2.8e-07 Score=72.83 Aligned_cols=58 Identities=22% Similarity=0.321 Sum_probs=47.5
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.|+++|||+++|||.+++++|+++|++|++++|+. +..++..++++..+.+ +.++++|
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 60 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-VIFFPAD 60 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCc-eEEEEec
Confidence 47899999999999999999999999999999864 4455666666666666 7777776
No 151
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.4e-07 Score=74.45 Aligned_cols=53 Identities=25% Similarity=0.386 Sum_probs=42.8
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++||||++|||++++++|+++|++|++++|+++++++..+ .+.+ +..+++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~D 54 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSAN-IFTLAFD 54 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCC-CeEEEee
Confidence 689999999999999999999999999999998766554433 2334 5666666
No 152
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.53 E-value=4.1e-07 Score=70.91 Aligned_cols=61 Identities=28% Similarity=0.412 Sum_probs=48.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|+++|||+++|+|.++++.|+++|++|++..++.+ ..++..++++..+.+ +..+.+|
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 63 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK-ALAVQGD 63 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc-eEEEEcC
Confidence 356789999999999999999999999999988777654 456666667666666 6666665
No 153
>PRK06484 short chain dehydrogenase; Validated
Probab=98.53 E-value=1.9e-07 Score=81.58 Aligned_cols=57 Identities=25% Similarity=0.409 Sum_probs=47.9
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..||+++||||++|||+++|++|+++|++|++.+|++++++++.+++ +.+ +..+++|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 323 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDE-HLSVQAD 323 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eeEEEcc
Confidence 46899999999999999999999999999999999987777766554 445 5666665
No 154
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.7e-07 Score=73.08 Aligned_cols=60 Identities=28% Similarity=0.443 Sum_probs=47.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++++|+++|||+++|||+.++++|+++|++|++++|+++..++..++..+. + +..+.+|
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~D 66 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--K-VTATVAD 66 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--c-eEEEEcc
Confidence 3567899999999999999999999999999999999877666655544322 3 4555554
No 155
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.7e-07 Score=73.12 Aligned_cols=56 Identities=25% Similarity=0.358 Sum_probs=47.0
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|+++|||+++|||++++++|+++|++|++++|+.++.++..+++. +.+ +..+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~-~~~~~~D 57 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DAR-FVPVACD 57 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCc-eEEEEec
Confidence 5789999999999999999999999999999999887777776662 334 6666665
No 156
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.3e-07 Score=73.73 Aligned_cols=48 Identities=29% Similarity=0.534 Sum_probs=41.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
.++||+++|||+++|||.+++++|+++|++|++++|+++..++..+++
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV 51 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Confidence 467899999999999999999999999999999999876665554443
No 157
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.51 E-value=3.7e-07 Score=71.29 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=46.1
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++|||+++|||++++++|+++|++|++.+| +++..++..+++...+.+ +..+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 58 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD-FRVVEGD 58 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCc-eEEEEec
Confidence 68999999999999999999999999998887 555566666666555556 7777766
No 158
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.50 E-value=3.8e-07 Score=73.08 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=46.4
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D 159 (159)
++++||||++|||++++++|+++|++|++.++ ++++++++.++++.. +.+ +..+.+|
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~D 60 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNS-AVTCQAD 60 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCc-eEEEEcc
Confidence 68999999999999999999999999998765 566777777777654 445 6667776
No 159
>PRK12742 oxidoreductase; Provisional
Probab=98.50 E-value=3.8e-07 Score=71.27 Aligned_cols=45 Identities=18% Similarity=0.381 Sum_probs=37.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~ 141 (159)
.++++|+++||||++|||+++|++|+++|++|++.++ +++..+++
T Consensus 2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l 47 (237)
T PRK12742 2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERL 47 (237)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 4567899999999999999999999999999988766 34434433
No 160
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.49 E-value=5.3e-07 Score=71.28 Aligned_cols=59 Identities=24% Similarity=0.340 Sum_probs=44.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++.+|+++|||+++|||.++|++|+++|++|++++|+++. .+..+++. +.+ +..+++|
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~-~~~~~~D 69 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGN-AKGLVCD 69 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCc-eEEEEec
Confidence 46789999999999999999999999999999999998653 33333332 233 4455555
No 161
>PRK08264 short chain dehydrogenase; Validated
Probab=98.48 E-value=3.3e-07 Score=71.74 Aligned_cols=43 Identities=26% Similarity=0.507 Sum_probs=38.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN 139 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~ 139 (159)
+++.+++++||||++|+|+++|++|+++|+ +|++++|+.++.+
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 456789999999999999999999999999 9999999876544
No 162
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.48 E-value=5.3e-07 Score=70.97 Aligned_cols=58 Identities=19% Similarity=0.361 Sum_probs=43.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+++|+++||||++|||+++|+.|+++|++|++.++ ++++.++..+++ +.+ +.++++|
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~-~~~~~~D 60 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDR-AIALQAD 60 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCc-eEEEEcC
Confidence 356899999999999999999999999999988765 444444443332 334 6666666
No 163
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.47 E-value=4.9e-07 Score=70.79 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=47.9
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||.+++++|+++|++|++ ..|++++.++..+++++.+.+ +..+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 59 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK-AFVLQAD 59 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCe-EEEEEcc
Confidence 58999999999999999999999999987 467777777777777776666 7777776
No 164
>PLN00015 protochlorophyllide reductase
Probab=98.47 E-value=2.1e-07 Score=76.58 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=46.2
Q ss_pred EEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 105 LLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|||+++|||+++|++|+++| ++|++.+|++++.++..++++..+.+ +..+++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D 55 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDS-YTVMHLD 55 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCe-EEEEEec
Confidence 589999999999999999999 99999999988888887777654555 7777776
No 165
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.46 E-value=5.2e-07 Score=71.64 Aligned_cols=39 Identities=23% Similarity=0.354 Sum_probs=36.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.+++||+++|||+++|||++++++|+++|++|++.+|++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence 457899999999999999999999999999999999864
No 166
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.45 E-value=8.5e-07 Score=69.94 Aligned_cols=61 Identities=23% Similarity=0.401 Sum_probs=45.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--HHHHHHHHHHcC-CCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--NNETKQMLEEQG-YKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--~~~~~~ei~~~g-~~~v~~~~~D 159 (159)
.+.+|+++|||+++|||+++|++|+++|++|++..++.+. .++..+..+..+ .. +...++|
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 65 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR-AAAVAAD 65 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCc-EEEEEec
Confidence 4578999999999999999999999999998888877654 444444444122 23 5555555
No 167
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=8.1e-07 Score=69.18 Aligned_cols=62 Identities=26% Similarity=0.417 Sum_probs=47.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..++.|.++|||++++||.+++++|+++|++|++..++ .+..++..++++..+.+ +..+.+|
T Consensus 2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (249)
T PRK12825 2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR-AQAVQAD 64 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence 34567899999999999999999999999998876654 44455566666666666 7777766
No 168
>PRK06182 short chain dehydrogenase; Validated
Probab=98.44 E-value=3.8e-07 Score=73.24 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=37.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
++|+++|||+++|||++++++|+++|++|++.+|+++++++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~ 43 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL 43 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999999987665443
No 169
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.44 E-value=5.2e-07 Score=70.68 Aligned_cols=55 Identities=20% Similarity=0.343 Sum_probs=46.8
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++|||+++|||+++|++|+++|++|++++++ +++.++..+++++.+.+ +.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D 56 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN-ARLLQFD 56 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe-EEEEEcc
Confidence 5899999999999999999999999988765 45677777888777777 8888887
No 170
>KOG4169|consensus
Probab=98.43 E-value=4.7e-07 Score=72.58 Aligned_cols=60 Identities=22% Similarity=0.334 Sum_probs=49.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
++.||++++||+.+|||++++++|.++|..+.+.+.+.|+.++. .++++.. .+ +.+++||
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~-v~F~~~D 63 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVS-VIFIKCD 63 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCCCce-EEEEEec
Confidence 57899999999999999999999999999988888777775544 4565554 34 7888887
No 171
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.43 E-value=4e-07 Score=73.50 Aligned_cols=42 Identities=21% Similarity=0.213 Sum_probs=37.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+|+++||||++|||+++|++|+++|++|++++|+++.++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l 44 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL 44 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 468999999999999999999999999999999987665443
No 172
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.43 E-value=5.7e-07 Score=72.39 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=44.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+|+++|||+++|||+.++++|+++|++|++.+|+.+.+++..++. +.+ +..+++|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 57 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDR-LLPLALD 57 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCC-eeEEEcc
Confidence 4689999999999999999999999999999999877665544332 334 5555555
No 173
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.43 E-value=6e-07 Score=72.40 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=43.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.+|+++||||++|||++++++|+++|++|++++|++++.+++.+. .+.+ +..+++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~-~~~~~~D 58 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDR-ALARLLD 58 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCC-eeEEEcc
Confidence 468999999999999999999999999999999987665544332 2334 5555554
No 174
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.42 E-value=7.3e-07 Score=70.34 Aligned_cols=54 Identities=17% Similarity=0.327 Sum_probs=42.0
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++||||++|||++++++|+++|++|++.+|++ +.+++.. ++.+.+ +..+++|
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~-~~~~~~D 56 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSN-LTFHSLD 56 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCc-eEEEEec
Confidence 6899999999999999999999999999999976 3333222 223455 6777776
No 175
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.42 E-value=7.6e-07 Score=69.81 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=34.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
+|+++|||+++|||+++|++|+++|++|++.+|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 5799999999999999999999999999999998754
No 176
>PRK06398 aldose dehydrogenase; Validated
Probab=98.40 E-value=4.5e-07 Score=72.48 Aligned_cols=39 Identities=23% Similarity=0.572 Sum_probs=35.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.+++||+++|||+++|||+++|++|+++|++|++.+|++
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~ 40 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE 40 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 467899999999999999999999999999999988764
No 177
>KOG1199|consensus
Probab=98.38 E-value=9.8e-07 Score=68.53 Aligned_cols=58 Identities=21% Similarity=0.392 Sum_probs=50.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.+|-+++||||.+|+|++.|++|+++|+.|++.|....+.++.++|+ |.+ +++..+|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~-~vf~pad 63 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGK-VVFTPAD 63 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCc-eEEeccc
Confidence 346789999999999999999999999999999999988888888776 666 7777665
No 178
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.37 E-value=1.4e-06 Score=69.16 Aligned_cols=38 Identities=26% Similarity=0.551 Sum_probs=34.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
++.+|+++||||++|||+++|++|+++|++|++.+++.
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 46789999999999999999999999999998876654
No 179
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.37 E-value=9.7e-07 Score=69.89 Aligned_cols=54 Identities=24% Similarity=0.376 Sum_probs=43.3
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++++|||+++|||.+++++|+++|++|++.+|+++++++..+++ +.+ +..+++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 54 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDN-LYIAQLD 54 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc-eEEEEec
Confidence 36899999999999999999999999999999887666655443 334 5566665
No 180
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.37 E-value=9.5e-07 Score=70.44 Aligned_cols=39 Identities=33% Similarity=0.616 Sum_probs=35.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++++|+++|||+++|||++++++|+++|++|++.+++++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~ 44 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG 44 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 577999999999999999999999999999999887654
No 181
>PRK08324 short chain dehydrogenase; Validated
Probab=98.36 E-value=1.1e-06 Score=80.17 Aligned_cols=62 Identities=27% Similarity=0.395 Sum_probs=51.6
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
...+.||+++||||++|||++++++|+++|++|++++|+.+..++..+++... .+ +..+++|
T Consensus 417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~-v~~v~~D 478 (681)
T PRK08324 417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DR-ALGVACD 478 (681)
T ss_pred CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-Cc-EEEEEec
Confidence 34578999999999999999999999999999999999988877777766544 34 6666665
No 182
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.2e-06 Score=68.55 Aligned_cols=47 Identities=26% Similarity=0.362 Sum_probs=40.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.++++|.++|||+++|||..+++.|+++|++|++++|+.++.++..+
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 51 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG 51 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45788999999999999999999999999999999998766554443
No 183
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.34 E-value=8.6e-07 Score=69.02 Aligned_cols=53 Identities=21% Similarity=0.287 Sum_probs=44.7
Q ss_pred EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+|||+++|||++++++|+++|++|++++|++++.++..++++ .+.+ +..+.+|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~D 53 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAP-VRTAALD 53 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCc-eEEEEcc
Confidence 589999999999999999999999999999877777777665 3555 6777776
No 184
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.33 E-value=1.6e-06 Score=77.73 Aligned_cols=53 Identities=8% Similarity=0.169 Sum_probs=45.8
Q ss_pred CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
.....+||+++||||+||||+.++++|+++|++|++++|+.++++++.+++++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~ 126 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQ 126 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhh
Confidence 33445789999999999999999999999999999999999888877776643
No 185
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.31 E-value=9.9e-07 Score=70.75 Aligned_cols=39 Identities=23% Similarity=0.421 Sum_probs=36.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++++|+++||||++|||+++|++|+++|++|++++|+.
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 356789999999999999999999999999999999876
No 186
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.30 E-value=2e-06 Score=67.22 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=42.7
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
|+++|||+++|||.++|++|+++|++|++.+|+.+ ..++..++....+.+ +..+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 60 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQ-VRLKELD 60 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCe-EEEEEcC
Confidence 68999999999999999999999999999999853 223333333333445 6677766
No 187
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.30 E-value=2e-06 Score=67.72 Aligned_cols=39 Identities=28% Similarity=0.498 Sum_probs=35.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++++|+++|||+++|||.+++++|+++|++|++.+|+.
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 347789999999999999999999999999999998865
No 188
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.8e-06 Score=69.25 Aligned_cols=55 Identities=15% Similarity=0.274 Sum_probs=42.8
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.|+++||||++|||++++++|+++|++|++.+|+++..++..++. +.+ +.++++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D 56 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDR-LWVLQLD 56 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCc-eEEEEcc
Confidence 478999999999999999999999999999999876655543332 234 5556655
No 189
>KOG1210|consensus
Probab=98.27 E-value=5.5e-06 Score=69.08 Aligned_cols=58 Identities=22% Similarity=0.206 Sum_probs=49.1
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D 159 (159)
++++|||||+|+|+++|.++..+|++|.+..|+.+++++++++++-.. ..++.+..+|
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d 92 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVD 92 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccc
Confidence 799999999999999999999999999999999999999999887543 2114455554
No 190
>PRK07069 short chain dehydrogenase; Validated
Probab=98.27 E-value=2.7e-06 Score=66.84 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=44.1
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGY-KNIHTYKRS 159 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~-~~v~~~~~D 159 (159)
++||||++|||+++++.|+++|++|++++|+ .+.+++..+++++... ..+..+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D 59 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQD 59 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEee
Confidence 7999999999999999999999999999998 6667777777765432 213445554
No 191
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.27 E-value=1.5e-06 Score=72.05 Aligned_cols=38 Identities=26% Similarity=0.444 Sum_probs=34.6
Q ss_pred CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
.+++||+++|||++ +|||+++|++|+++|++|++.++.
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 46789999999996 999999999999999999998754
No 192
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.27 E-value=2.2e-06 Score=66.89 Aligned_cols=39 Identities=28% Similarity=0.472 Sum_probs=35.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++++|+++|||+++|||++++++|+++|++|++++|+..
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467899999999999999999999999999999988653
No 193
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.25 E-value=3e-06 Score=73.24 Aligned_cols=41 Identities=24% Similarity=0.421 Sum_probs=37.0
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
++||+++||||++|||++++++|+++|++|++++|++++.+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~ 216 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT 216 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 56899999999999999999999999999999999876543
No 194
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.24 E-value=1.4e-06 Score=69.59 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=34.1
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++++++||||++|||++++++|+++|++|++.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~ 39 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPA 39 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4689999999999999999999999999999999754
No 195
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.23 E-value=3.5e-06 Score=65.49 Aligned_cols=55 Identities=25% Similarity=0.344 Sum_probs=45.5
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++|||++++||..++++|+++|++|++.+|+. +..++..+++++.+.+ +..+++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D 56 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK-ALGVVCD 56 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc-eEEEEec
Confidence 58999999999999999999999999998875 4556666777766766 7777776
No 196
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.21 E-value=3.5e-06 Score=65.76 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=35.6
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
|+++|||+++|||++++++|+++|++|++++|++++.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~ 40 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA 40 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH
Confidence 689999999999999999999999999999998876544
No 197
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.20 E-value=4.5e-06 Score=61.08 Aligned_cols=57 Identities=23% Similarity=0.266 Sum_probs=43.6
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH---HHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET---KQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~---~~ei~~~g~~~v~~~~~D 159 (159)
|+++|||+++|||.+++++|+++|+ .|++.+|+++..++. .+++++.+.+ +..+++|
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 61 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAE-VTVVACD 61 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCe-EEEEECC
Confidence 5789999999999999999999997 677888876544332 3455555666 7777776
No 198
>KOG1207|consensus
Probab=98.18 E-value=3.1e-06 Score=65.78 Aligned_cols=49 Identities=29% Similarity=0.432 Sum_probs=45.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
.++.|+.+++||+..|||++++++|++.|++|+.++|+++.++.+++|.
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~ 51 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET 51 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC
Confidence 3578999999999999999999999999999999999999988888764
No 199
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.18 E-value=4.3e-06 Score=65.78 Aligned_cols=51 Identities=18% Similarity=0.294 Sum_probs=39.1
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.++||||++|||++++++|+++|++|++++|+.+. +. .+..+.+ +..+++|
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~~~~~~-~~~~~~D 53 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL---AAAAGER-LAEVELD 53 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh---hhccCCe-EEEEEec
Confidence 68999999999999999999999999999987643 11 1222444 6666665
No 200
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.17 E-value=5.4e-06 Score=68.12 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=44.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D 159 (159)
.+|+++||||+++||+.++++|+++|++|++++|+.+..++..+.....+ .+ +.++++|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D 64 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKER-LKLFKAD 64 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCc-eEEEeCC
Confidence 47899999999999999999999999999988888766554433222222 34 5666665
No 201
>PLN02583 cinnamoyl-CoA reductase
Probab=98.17 E-value=5.9e-06 Score=67.65 Aligned_cols=60 Identities=10% Similarity=0.065 Sum_probs=42.8
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--HHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--NNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--~~~~~~ei~~~g~~~v~~~~~D 159 (159)
-.+|+++||||+++||+.++++|+++|++|+++.|+.+. .++..+++...+.+ +..+++|
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~-~~~~~~D 65 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEER-LKVFDVD 65 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCc-eEEEEec
Confidence 357899999999999999999999999999998886432 22223333222334 5566665
No 202
>PRK08017 oxidoreductase; Provisional
Probab=98.14 E-value=4.2e-06 Score=66.02 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=35.2
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
|+++|||+++|||.++++.|+++|++|++++|+.++.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~ 41 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR 41 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH
Confidence 689999999999999999999999999999998765543
No 203
>KOG1478|consensus
Probab=98.13 E-value=7.6e-06 Score=66.87 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=48.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCC-----EEEEEcCCCccHHHHHHHHHHcCCCe---EEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKV-----TLVCWDIDEKGNNETKQMLEEQGYKN---IHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-----~Vvi~~r~~~~~~~~~~ei~~~g~~~---v~~~~~D 159 (159)
..|+++|||+++|+|.++|.+|.+..- ++++.+|+.+++|+++..+++...++ +.++++|
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD 69 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVD 69 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEe
Confidence 468999999999999999999987542 46778999999999999998765421 5566665
No 204
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.13 E-value=8.5e-06 Score=67.93 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=37.4
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
++||.++||||+++||.+++++|+++|++|++++|+.....+.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 44 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNL 44 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhH
Confidence 4578999999999999999999999999999999877654443
No 205
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.10 E-value=2.3e-05 Score=67.46 Aligned_cols=59 Identities=15% Similarity=0.233 Sum_probs=45.4
Q ss_pred CCCCeEEEeCCCCCchHH--HHHHHHHCCCEEEEEcCCCcc------------HHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRE--LAKQFVQHKVTLVCWDIDEKG------------NNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~--ia~~la~~Ga~Vvi~~r~~~~------------~~~~~~ei~~~g~~~v~~~~~D 159 (159)
-.+|+++|||+++|+|.+ +|++| ++|++++++++..+. .+++.+++++.|.. +..++||
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~-a~~i~~D 111 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLY-AKSINGD 111 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCc-eEEEEcC
Confidence 357999999999999999 89999 999998888753321 23455566666776 7788887
No 206
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.09 E-value=4.6e-06 Score=66.96 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=34.2
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
|+++||||++|||++++++|+++|++|++++|++++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 39 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE 39 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 68999999999999999999999999999998865443
No 207
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.09 E-value=8.5e-06 Score=67.55 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=36.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.+.++|.++||||+++||.+++++|+++|++|++.+|+.+
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 3567899999999999999999999999999999888653
No 208
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.09 E-value=9.7e-06 Score=66.86 Aligned_cols=52 Identities=13% Similarity=0.314 Sum_probs=44.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCC---ccHHHHHHHHHHcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDE---KGNNETKQMLEEQGY 150 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~---~~~~~~~~ei~~~g~ 150 (159)
++++|+++|+|+ +|+|++++..|++.|++ |.+++|+. ++.+++++++.+.+.
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~ 178 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP 178 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC
Confidence 467899999999 69999999999999986 99999987 677888887765543
No 209
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.08 E-value=1.5e-05 Score=61.13 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=45.5
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++||||.+|||..+++.|+++|. +++++.|+ ....++..+++++.|.+ +.+++||
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~-v~~~~~D 61 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR-VEYVQCD 61 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E-EEEEE--
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc-eeeeccC
Confidence 689999999999999999999985 78999998 23456788899988988 9999987
No 210
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.07 E-value=4.9e-06 Score=65.37 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=37.5
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
.++||||++|||++++++|+++|++|++.+|+++++++..+++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 4899999999999999999999999999999887776665543
No 211
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.06 E-value=1e-05 Score=67.19 Aligned_cols=58 Identities=16% Similarity=0.310 Sum_probs=43.2
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++||+++||||+++||.+++++|+++| ++|++.+|+....+++.+++. +.+ +.++.+|
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~-~~~v~~D 61 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APC-LRFFIGD 61 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCc-EEEEEcc
Confidence 357899999999999999999999986 689989987655444433331 234 5666665
No 212
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.99 E-value=1.7e-05 Score=66.18 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=44.8
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
-.+++++||||++.||..++++|+++|++|++++|+.+..+...+++.. +.+ +..+.+|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~D 66 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDR-LRLFRAD 66 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCe-EEEEECC
Confidence 3567899999999999999999999999999998887655554444322 334 5566655
No 213
>KOG1610|consensus
Probab=97.99 E-value=3.8e-05 Score=64.13 Aligned_cols=51 Identities=25% Similarity=0.399 Sum_probs=45.1
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE 146 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~ 146 (159)
..+..+|.|+||||.+|.|+.+|++|.++|.+|+..+.+++..+++..+.+
T Consensus 24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~ 74 (322)
T KOG1610|consen 24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK 74 (322)
T ss_pred ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc
Confidence 456789999999999999999999999999999998888888787776664
No 214
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=2.8e-05 Score=67.14 Aligned_cols=37 Identities=35% Similarity=0.720 Sum_probs=34.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
.+++|+++|||+++|||+++|+.|+++|++|++++++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999999884
No 215
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.96 E-value=1.4e-05 Score=62.29 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=33.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.+|+++||||++|||++++++|+++|++|++++|+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA 37 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 578999999999999999999999999999988854
No 216
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.94 E-value=1.8e-05 Score=61.06 Aligned_cols=41 Identities=27% Similarity=0.351 Sum_probs=35.6
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.|+++||||++++|+.++++|+++ ++|++.+|+.+..++..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~ 43 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELA 43 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHH
Confidence 578999999999999999999999 99999999876554443
No 217
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.94 E-value=3.3e-05 Score=63.44 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=37.3
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+||+++||||+|.||..++++|+++|++|++..|+.+..++.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 3578999999999999999999999999999888877654443
No 218
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.94 E-value=2.1e-05 Score=80.44 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDID 134 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~ 134 (159)
++++++||||++|||.++|++|+++ |++|++++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 4899999999999999999999998 6999999998
No 219
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.92 E-value=1.7e-05 Score=61.79 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=34.7
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
|+++|||+++|||++++++|+++|++|++++|+.+..++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~ 40 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA 40 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 579999999999999999999999999999998665443
No 220
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.91 E-value=3.2e-05 Score=59.60 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=42.7
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+++||||+ |+|.+++++|+++|++|.+.+|+.++.+++...+.. +.+ +..+++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~-i~~~~~D 55 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PES-ITPLPLD 55 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCc-EEEEEcc
Confidence 58999998 888999999999999999999988776666655543 334 6666665
No 221
>PLN02240 UDP-glucose 4-epimerase
Probab=97.89 E-value=6e-05 Score=62.42 Aligned_cols=39 Identities=31% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.+++|.++||||++++|..++++|+++|++|++.++...
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~ 40 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDN 40 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 456789999999999999999999999999999987543
No 222
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.86 E-value=4.6e-05 Score=62.28 Aligned_cols=40 Identities=28% Similarity=0.302 Sum_probs=35.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
++|.++||||+|.||..++++|.++|++|.+++|+.+..+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPK 42 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchh
Confidence 4689999999999999999999999999999888765433
No 223
>PLN02214 cinnamoyl-CoA reductase
Probab=97.84 E-value=7e-05 Score=62.62 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=35.5
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.++|.++||||+|.||..++++|.++|++|.+.+|+.+.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 457899999999999999999999999999999997654
No 224
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.84 E-value=3.2e-05 Score=61.61 Aligned_cols=42 Identities=12% Similarity=0.255 Sum_probs=36.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
...++.++|||++|++|+.++++|+++|++|++..|+.++.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 55 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK 55 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 345789999999999999999999999999998888865543
No 225
>PLN02686 cinnamoyl-CoA reductase
Probab=97.83 E-value=5.7e-05 Score=63.90 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=37.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
+.++|.++||||+++||..++++|+++|++|+++.|+.+..+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l 93 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56789999999999999999999999999999888876554443
No 226
>KOG1209|consensus
Probab=97.81 E-value=4.3e-05 Score=61.22 Aligned_cols=43 Identities=23% Similarity=0.323 Sum_probs=36.8
Q ss_pred CCCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 100 EGEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 100 ~gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
..|.++||||+ +|||.++|++|+++|+.|+.++|+.+...++.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~ 49 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA 49 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH
Confidence 45788899887 79999999999999999999999877665554
No 227
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.80 E-value=9.8e-05 Score=64.23 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=34.5
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI 133 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r 133 (159)
....++|.++||||+|+||+.++++|+++|++|+++|+
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 34577899999999999999999999999999999874
No 228
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.77 E-value=5.8e-05 Score=58.27 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=45.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
+++++.++|.|+++++|+.+++.++++|++|.+++|+.+++++..+++++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~ 74 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRA 74 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 57789999999999999999999999999999999998888888877753
No 229
>PLN02650 dihydroflavonol-4-reductase
Probab=97.77 E-value=7.2e-05 Score=62.34 Aligned_cols=43 Identities=23% Similarity=0.231 Sum_probs=37.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
..|.++||||+|.||..++++|+++|++|++.+|+.+..++..
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~ 46 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVK 46 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHH
Confidence 4678999999999999999999999999999888876555443
No 230
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.76 E-value=0.0001 Score=60.98 Aligned_cols=42 Identities=12% Similarity=0.051 Sum_probs=36.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
+.+++.++||||+|.||..++++|.++|++|++++|+.+...
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~ 47 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQK 47 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHH
Confidence 456889999999999999999999999999988888765433
No 231
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.75 E-value=6.1e-05 Score=62.56 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=32.4
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
|+++||||+|.||..++++|+++|++|++++|+.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 58999999999999999999999999999998754
No 232
>KOG1611|consensus
Probab=97.74 E-value=8e-05 Score=59.79 Aligned_cols=58 Identities=17% Similarity=0.338 Sum_probs=40.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHH-CCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQ-HKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
.|.++||||++|||..++++|.+ .|..+++ .+|+.+++.+..++......+ ++.+++|
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~r-vHii~Ld 62 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSR-VHIIQLD 62 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCc-eEEEEEe
Confidence 46799999999999999999986 4666666 466777653222222223455 8888776
No 233
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.00011 Score=65.66 Aligned_cols=61 Identities=28% Similarity=0.448 Sum_probs=50.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
.+.||+++||||+|.||.++|+++++.+. ++++.++++-+..+...+++.. ..+ ...+-+|
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~-~~~~igd 310 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELK-LRFYIGD 310 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcc-eEEEecc
Confidence 46799999999999999999999999986 5888999999999998888875 233 4555554
No 234
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.61 E-value=0.00014 Score=62.24 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=35.3
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
..++.++||||+|.||+.++++|.++|++|++.+|+.+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 457899999999999999999999999999999997654
No 235
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.52 E-value=0.00034 Score=57.62 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=30.5
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.++||||+++||+.++++|+++|++|++.++..+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~ 35 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCN 35 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCC
Confidence 5899999999999999999999999998876543
No 236
>KOG1502|consensus
Probab=97.50 E-value=0.00029 Score=59.32 Aligned_cols=59 Identities=24% Similarity=0.279 Sum_probs=45.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH--HHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET--KQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~--~~ei~~~g~~~v~~~~~D 159 (159)
.++.+.||||+|=||..++++|.++|+.|....|++++.+.. ..+++..+-+ ...+..|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~-l~l~~aD 65 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKER-LKLFKAD 65 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCccc-ceEEecc
Confidence 678999999999999999999999999999999998774442 4444433333 4555554
No 237
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.47 E-value=0.00034 Score=51.32 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=44.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHHHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQML 145 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~~~~~ei 145 (159)
.+++++.++|-|+ ||.|++++..|++.|++ |.++.|+.++++++++++
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 4688999999997 99999999999999987 999999999999998888
No 238
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.44 E-value=0.00053 Score=55.31 Aligned_cols=61 Identities=21% Similarity=0.165 Sum_probs=49.0
Q ss_pred CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
..++||..+|+|-+ ++|+..+|+.+.++|++++..+.++ ++++-++++-+.-+. ...++||
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cD 64 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCD 64 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecC
Confidence 46899999999965 6999999999999999999999887 566656666554333 5778887
No 239
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.36 E-value=0.0006 Score=55.94 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=30.9
Q ss_pred eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCc
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEK 136 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~ 136 (159)
+++|||++|++|..++++|.++| ++|++..|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 47999999999999999999999 78999998765
No 240
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.35 E-value=0.00063 Score=58.74 Aligned_cols=53 Identities=30% Similarity=0.375 Sum_probs=42.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYK 151 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~ 151 (159)
++++|.++|+|+++ +|.++|+.|+++|++|.++|++. +..++..+++++.|.+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~ 55 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE 55 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE
Confidence 46789999999877 99999999999999999999975 4455555666554543
No 241
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.34 E-value=0.00047 Score=55.79 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=29.9
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.++||||+++||..++++|.++|++|++.++...
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~ 34 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSN 34 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 3789999999999999999999999988876443
No 242
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.32 E-value=0.00023 Score=56.04 Aligned_cols=39 Identities=21% Similarity=0.367 Sum_probs=34.3
Q ss_pred CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040 111 NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149 (159)
Q Consensus 111 ~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g 149 (159)
+|||+++|++|+++|++|++++|+.++.++..+++.++.
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~ 44 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY 44 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc
Confidence 999999999999999999999999988777777776553
No 243
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.30 E-value=0.00035 Score=54.48 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=27.2
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHK--VTLVCWDID 134 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~ 134 (159)
++++|||+++|||+++|++|+++| ..|...+|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~ 35 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRH 35 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccC
Confidence 478999999999999999999985 556555554
No 244
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.29 E-value=0.00061 Score=58.77 Aligned_cols=53 Identities=23% Similarity=0.229 Sum_probs=42.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~ 151 (159)
++++|.++|||+++ +|.+.|+.|++.|++|++.|++.....+..+++++.|.+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~ 54 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIK 54 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCE
Confidence 35789999999976 999999999999999999998765545555566665544
No 245
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00034 Score=53.47 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.4
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
+++|||+++|||++++++|+++ ++|++.+|+.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 6899999999999999999999 9999988854
No 246
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.27 E-value=0.00098 Score=55.71 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=35.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.+++|.++||||+|=||..++++|.++|++|++++|...
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 456789999999999999999999999999999988654
No 247
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.25 E-value=0.00045 Score=59.66 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=33.0
Q ss_pred CCCCCeEEEeCC---------------CCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040 98 SLEGEIILLTGA---------------GNG-IGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~---------------s~G-IG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
++.||+++|||| |+| +|+++|++++++|++|++++++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~ 237 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGP 237 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence 578999999999 555 9999999999999999988765
No 248
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.22 E-value=0.00061 Score=55.76 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=43.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
++.+|.++|.|+ ||+|+++++.|++.| .+|.+++|+.++.+++++++..
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~ 169 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA 169 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 567899999997 899999999999999 7899999999888888887753
No 249
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.18 E-value=0.0006 Score=60.83 Aligned_cols=47 Identities=21% Similarity=0.328 Sum_probs=41.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
++++|.++|+|+ +|+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 467899999999 69999999999999999999999988888877654
No 250
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.15 E-value=0.00038 Score=57.85 Aligned_cols=45 Identities=36% Similarity=0.562 Sum_probs=39.2
Q ss_pred EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
++||||+|.||.++|+++++.|. ++++.|+++.++-++.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~ 46 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR 46 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc
Confidence 68999999999999999999985 7999999999999998888643
No 251
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.11 E-value=0.001 Score=54.16 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=43.1
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
..+|.++++|+ +|+|++++..+++.|++|.+++|++++.+++++++++.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~ 163 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY 163 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc
Confidence 45789999998 69999999999999999999999998888888877553
No 252
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.07 E-value=0.00073 Score=54.92 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=32.1
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.++|||++|+||..++++|+++|++|++++|+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 68999999999999999999999999999987554
No 253
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.06 E-value=0.0012 Score=54.83 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=28.3
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEE-EEcCC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLV-CWDID 134 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vv-i~~r~ 134 (159)
|.++||||+++||..++++|.++|++++ +.++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~ 35 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL 35 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence 5799999999999999999999998754 45654
No 254
>KOG1371|consensus
Probab=97.06 E-value=0.0022 Score=54.01 Aligned_cols=58 Identities=17% Similarity=0.221 Sum_probs=43.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc---CCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ---GYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~---g~~~v~~~~~D 159 (159)
++.++||||++=||..++.+|.++|+.|+++|.-.....+....+++. +.+ +.++++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~-v~f~~~D 62 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKS-VFFVEGD 62 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCc-eEEEEec
Confidence 578999999999999999999999999999987443333333333332 345 7777776
No 255
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.05 E-value=0.00096 Score=56.56 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=42.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHC-C-CEEEEEcCCCccHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQH-K-VTLVCWDIDEKGNNETKQMLE 146 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~-G-a~Vvi~~r~~~~~~~~~~ei~ 146 (159)
++++|+++|||++|.||..+|++|+++ | .++++++|+++++++..+++.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~ 202 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG 202 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc
Confidence 688999999999999999999999864 5 489999999888887777663
No 256
>PLN02427 UDP-apiose/xylose synthase
Probab=97.05 E-value=0.0013 Score=55.59 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=34.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCcc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKG 137 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~ 137 (159)
+.+.++++||||+|-||..++++|.++ |++|++++|+.++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~ 51 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK 51 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh
Confidence 345568999999999999999999998 5899989887544
No 257
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.05 E-value=0.00099 Score=50.04 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=33.4
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
++|+||+|.+|+.++++|.++|++|....|++++.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~ 36 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE 36 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc
Confidence 689999999999999999999999999999987655
No 258
>PLN02778 3,5-epimerase/4-reductase
Probab=97.02 E-value=0.0031 Score=51.88 Aligned_cols=51 Identities=12% Similarity=0.027 Sum_probs=40.5
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~ 151 (159)
.+.++||||+|-||..++++|.++|.+|.....+.+..+.+...++..+.+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D 59 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPT 59 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCC
Confidence 367999999999999999999999999986655555556666666655555
No 259
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.92 E-value=0.0024 Score=51.42 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.2
Q ss_pred eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDID 134 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~ 134 (159)
.++||||+|+||..++++|.++| .+|++.++.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~ 34 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKL 34 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCC
Confidence 37999999999999999999987 688888764
No 260
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.79 E-value=0.0022 Score=55.34 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=32.8
Q ss_pred CCCCCeEEEeCC---------------CCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040 98 SLEGEIILLTGA---------------GNG-IGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~---------------s~G-IG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
+++||.++|||| |+| +|.++|++++++|++|++++++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~ 234 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP 234 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence 478999999999 667 9999999999999999987653
No 261
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.79 E-value=0.0051 Score=49.31 Aligned_cols=48 Identities=25% Similarity=0.383 Sum_probs=36.5
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---ccHHHHHHHHHHcCCC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---KGNNETKQMLEEQGYK 151 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---~~~~~~~~ei~~~g~~ 151 (159)
++||||+|.||..++++|.++|++|++.+|+. ...+++.+.++....+
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d 52 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPD 52 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCC
Confidence 78999999999999999999999999988852 2334454555443334
No 262
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.78 E-value=0.0033 Score=46.16 Aligned_cols=48 Identities=21% Similarity=0.321 Sum_probs=40.8
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
.+++.+.++|+ +++|.++++.+++.| .+|.+++|+.++.++.++++..
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~ 65 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE 65 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 56788999998 899999999999996 7899999998888877776653
No 263
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.76 E-value=0.0028 Score=49.61 Aligned_cols=48 Identities=27% Similarity=0.551 Sum_probs=41.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
.+++||.+.|.|.+ .+|+.+|+.|.+.|++|++.|+++++.++..+++
T Consensus 24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~ 71 (200)
T cd01075 24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF 71 (200)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 46889999999995 8999999999999999999999987777666543
No 264
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.73 E-value=0.0017 Score=51.86 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.3
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
++||||+|.||..++++|+++|++|++.+|+.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 5899999999999999999999999999997654
No 265
>PLN00016 RNA-binding protein; Provisional
Probab=96.63 E-value=0.0057 Score=51.74 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=34.4
Q ss_pred CCCeEEEe----CCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 100 EGEIILLT----GAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 100 ~gk~~lIT----G~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
..+.++|| ||+|-||..++++|.++|++|.+++|+.+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 45789999 999999999999999999999999998654
No 266
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.60 E-value=0.0032 Score=51.85 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=32.0
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.++||||+|-+|+.++++|.++|++|.+.+|+.++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~ 36 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK 36 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH
Confidence 58999999999999999999999999999987543
No 267
>PLN02206 UDP-glucuronate decarboxylase
Probab=96.55 E-value=0.0069 Score=52.83 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=32.6
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
+++.++||||+|-||..++++|.++|.+|+++++..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~ 153 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF 153 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence 457899999999999999999999999999988753
No 268
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.53 E-value=0.0031 Score=50.88 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=30.9
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++||||+|.+|+.++++|.++|++|.+..|+++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~ 34 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSS 34 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence 789999999999999999999999999999864
No 269
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.49 E-value=0.0039 Score=49.29 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=35.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.++|||+++.+|..++++|.++|++|....|+.++.....
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 5899999999999999999999999999999977665543
No 270
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.43 E-value=0.013 Score=48.37 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=43.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
+..+|.++|-|+ ||.|++++..+++.|+ +|.+++|+.++.++++++++..
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 456788999987 8899999999999997 7999999999999998887544
No 271
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.42 E-value=0.0051 Score=53.06 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=41.8
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
+.++|-|+ |++|+.+|+.++++| .+|.++||+.++++++.+... .+ +.+.++|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~-v~~~~vD 55 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GK-VEALQVD 55 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---cc-ceeEEec
Confidence 46788888 999999999999999 899999999887777765432 23 5555555
No 272
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=96.42 E-value=0.0086 Score=49.65 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=27.0
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVT-LVCWDID 134 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~ 134 (159)
.++||||+|+||..++++|.++|.+ |+.+++.
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~ 34 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKL 34 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCC
Confidence 5899999999999999999999976 4445553
No 273
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.34 E-value=0.0061 Score=53.76 Aligned_cols=47 Identities=13% Similarity=0.276 Sum_probs=40.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
++++|.++++|+ +|+|++++..+++.|++|.+.+|+.++.++..+++
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 457899999996 79999999999999999999999987777766554
No 274
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=96.33 E-value=0.0072 Score=50.23 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=30.7
Q ss_pred CeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCc
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEK 136 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~ 136 (159)
+.++||||+|-||..++++|.++ |++|+..+|+.+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~ 37 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD 37 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH
Confidence 46999999999999999999886 699999988653
No 275
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=96.31 E-value=0.012 Score=51.15 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=32.0
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.+.++||||+|-||..++++|.++|++|++++|..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46799999999999999999999999999998753
No 276
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.31 E-value=0.0056 Score=51.82 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++.++||||+|-||..+++.|.++|++|..++|..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 578899999999999999999999999999988753
No 277
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.27 E-value=0.011 Score=46.23 Aligned_cols=46 Identities=24% Similarity=0.382 Sum_probs=38.1
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~ 151 (159)
++|+|++|.+|+.+++.|.+.|++|.+..|+. .++..++++..|..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~ 46 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAE 46 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccce
Confidence 68999999999999999999999999999988 34445566666654
No 278
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.18 E-value=0.011 Score=53.86 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=33.6
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCc
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEK 136 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~ 136 (159)
.+++.++||||+|-||..++++|.++ |++|+..+|+..
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~ 351 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD 351 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence 45788999999999999999999985 799999998654
No 279
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.15 E-value=0.019 Score=46.95 Aligned_cols=48 Identities=19% Similarity=0.297 Sum_probs=35.3
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-------ccHHHHHHHHHHcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-------KGNNETKQMLEEQGYK 151 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-------~~~~~~~~ei~~~g~~ 151 (159)
.++||||+|=||..++++|.++| +|+..+|.. ...+.+.+.+++.+.+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCC
Confidence 58999999999999999999999 788787743 2233444445544455
No 280
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.0079 Score=48.45 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++|||++|-||..++++|.++|++|...+|...
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 899999999999999999999999999998544
No 281
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.10 E-value=0.018 Score=52.44 Aligned_cols=36 Identities=28% Similarity=0.381 Sum_probs=31.6
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDID 134 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~ 134 (159)
.++|.++||||+|-||..++++|.++ |++|+..++.
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~ 41 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL 41 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 45689999999999999999999987 6788888874
No 282
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.07 E-value=0.01 Score=49.64 Aligned_cols=38 Identities=24% Similarity=0.347 Sum_probs=32.9
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
.++||||++=||..++.+|.+.|.+|++.|.-.....+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHH
Confidence 68999999999999999999999999999985544333
No 283
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.03 E-value=0.018 Score=47.76 Aligned_cols=51 Identities=20% Similarity=0.365 Sum_probs=45.0
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHcC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQG 149 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~g 149 (159)
+..|+.++|-|+ ||-+++++..|++.|+ +++++.|+.++++++++.+.+.+
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~ 174 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG 174 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence 446889999987 8999999999999995 79999999999999999888655
No 284
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=95.94 E-value=0.01 Score=48.34 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=26.0
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEE-EcC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVC-WDI 133 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r 133 (159)
++||||+|-||..++++|+++|+++++ .++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence 689999999999999999999986555 444
No 285
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.024 Score=50.95 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=30.3
Q ss_pred eEEEeCCCCCchHHHHHHHH--HCCCEEEEEcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFV--QHKVTLVCWDIDE 135 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la--~~Ga~Vvi~~r~~ 135 (159)
.++||||+|-||..++++|. ++|.+|.+++|+.
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~ 36 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ 36 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 58999999999999999999 5899999999965
No 286
>PRK09620 hypothetical protein; Provisional
Probab=95.84 E-value=0.015 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.513 Sum_probs=30.7
Q ss_pred CCCCeEEEeCCC----------------CCchHHHHHHHHHCCCEEEEEcC
Q psy2040 99 LEGEIILLTGAG----------------NGIGRELAKQFVQHKVTLVCWDI 133 (159)
Q Consensus 99 l~gk~~lITG~s----------------~GIG~~ia~~la~~Ga~Vvi~~r 133 (159)
+.||.++||+|. |-+|..+|+++.++|++|++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 468999999875 88999999999999999987764
No 287
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.82 E-value=0.034 Score=41.35 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=40.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+++||.+.|-|.+.-.|+.++..|.++|++|.+++++...+++..+
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~ 70 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVH 70 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHh
Confidence 37899999999999999999999999999999999877655555443
No 288
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.80 E-value=0.034 Score=45.90 Aligned_cols=49 Identities=22% Similarity=0.398 Sum_probs=42.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
+.++|.++|-|+ ||-+++++..|++.|+ ++.+++|+.++.+++++.+..
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 356788999987 9999999999999997 688999999999998887753
No 289
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.80 E-value=0.021 Score=46.97 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=41.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
++++|.++|-|+ ||-|++++..|++.|+ +|.++.|+.++.+++++++..
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~ 171 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ 171 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence 356888888876 9999999999999997 699999999998888877643
No 290
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.75 E-value=0.026 Score=43.20 Aligned_cols=45 Identities=22% Similarity=0.370 Sum_probs=38.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.++.||.++|.|++.-.|..+++.|.++|++|.++.|+.+++.+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~ 84 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH 84 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence 468999999999966579999999999999999999987555443
No 291
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=95.63 E-value=0.014 Score=47.31 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=27.7
Q ss_pred EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
++||||+|.||..++++|.++|+ .|++++|.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence 58999999999999999999998 68877764
No 292
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.46 E-value=0.035 Score=42.78 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=29.0
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
++||||+|=+|..++++|.++|..|+...++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccc
Confidence 689999999999999999999999887666543
No 293
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.43 E-value=0.027 Score=46.57 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=36.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
++.||++.|.|. |++|+++|+.+...|++|.+.+|++++.+
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 678999999999 66999999999999999999999876543
No 294
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=95.35 E-value=0.047 Score=43.99 Aligned_cols=29 Identities=10% Similarity=0.214 Sum_probs=25.4
Q ss_pred EEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDI 133 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r 133 (159)
+||||+|-||..+++.|.++|.+|+++.+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 58999999999999999999998776543
No 295
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.13 E-value=0.063 Score=40.89 Aligned_cols=46 Identities=24% Similarity=0.383 Sum_probs=36.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.+.-+|+.++..|.++|+.|.++..+.+.+++..+
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 6899999999999999999999999999999998887766665543
No 296
>KOG1430|consensus
Probab=95.08 E-value=0.049 Score=46.62 Aligned_cols=37 Identities=16% Similarity=0.328 Sum_probs=33.0
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEK 136 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~ 136 (159)
++.+++||||+|=+|+.++.+|.++| ..+.+.|..+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~ 41 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT 41 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence 46799999999999999999999999 78888888664
No 297
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.04 E-value=0.075 Score=44.44 Aligned_cols=47 Identities=15% Similarity=0.254 Sum_probs=40.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.++.||.+.+-|.++-+|+.+|..|.++|++|.++.++....++.++
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~ 201 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR 201 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh
Confidence 47899999999999999999999999999999999877665555443
No 298
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.99 E-value=0.071 Score=44.27 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=37.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
+++||.++|.|.+.=.|+.++..|.++|++|.++.++...+++
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~ 197 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS 197 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 6899999999999999999999999999999999886544443
No 299
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=94.99 E-value=0.052 Score=43.16 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=34.6
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|+|+++++|..+++.+...|++|+++++++++.+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4689999999999999999999999999998888755443
No 300
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.98 E-value=0.08 Score=46.23 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=41.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYK 151 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~ 151 (159)
++.+|.++|.|+ |++|.+.|+.|+++|++|.+.++++ +..+...+++++.|.+
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~ 66 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGAT 66 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCE
Confidence 467889999987 7799999999999999999998654 3344555667766654
No 301
>PRK06849 hypothetical protein; Provisional
Probab=94.95 E-value=0.063 Score=45.67 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
+.++++|||++.++|..+++.|.+.|.+|++++.++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 358999999999999999999999999999988765
No 302
>PRK05865 hypothetical protein; Provisional
Probab=94.93 E-value=0.032 Score=52.62 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++||||++.||..++++|.++|++|++++|+.
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~ 34 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR 34 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence 589999999999999999999999999988863
No 303
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=94.84 E-value=0.046 Score=43.61 Aligned_cols=31 Identities=10% Similarity=0.210 Sum_probs=25.6
Q ss_pred eEEEeC-CCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040 103 IILLTG-AGNGIGRELAKQFVQHKVTLVCWDI 133 (159)
Q Consensus 103 ~~lITG-~s~GIG~~ia~~la~~Ga~Vvi~~r 133 (159)
+=.||. +++|||+++|++|+++|++|+++++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~ 47 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTT 47 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence 444555 4678999999999999999999875
No 304
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.83 E-value=0.1 Score=40.74 Aligned_cols=52 Identities=29% Similarity=0.294 Sum_probs=40.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGY 150 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~ 150 (159)
.+.++.++|-|+ +|+|.++++.|++.|. ++.++|.+ ..+.+.+.+.+++.+.
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np 89 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS 89 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC
Confidence 466788888874 8999999999999997 78888876 2345666677766554
No 305
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.82 E-value=0.043 Score=46.55 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=37.7
Q ss_pred EEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++|-|+ |.+|+.+++.|++++- +|++.+|+.+++++..+++ .+.+ +...++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~-~~~~~~d 54 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDR-VEAVQVD 54 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTT-EEEEE--
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccc-eeEEEEe
Confidence 578899 9999999999999874 7999999999888887765 3334 5566554
No 306
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.81 E-value=0.059 Score=41.42 Aligned_cols=43 Identities=19% Similarity=0.387 Sum_probs=34.0
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
+-|-|+ |-+|.++|..++..|++|.+.|++++.+++..+.+++
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 445565 8899999999999999999999999887776666543
No 307
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=94.78 E-value=0.054 Score=44.66 Aligned_cols=42 Identities=12% Similarity=0.163 Sum_probs=34.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.|++++|+|+++++|...++-....|++|+.+++++++.+.+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999998887778899998888776554433
No 308
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=94.70 E-value=0.066 Score=42.66 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=34.6
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|+.++|+|+++++|.++++.+.+.|++|++.++++++.+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 183 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE 183 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4789999999999999999999999999999888665433
No 309
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.57 E-value=0.066 Score=43.99 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=33.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET 141 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~ 141 (159)
|++++|+|+++|+|...++.....|+ +|+.+++++++.+.+
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~ 196 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL 196 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 48999999999999998877777898 798888876654444
No 310
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=94.53 E-value=0.076 Score=42.97 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=34.6
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|+|+++++|.++++.+...|++|+..++++++.+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 4678999999999999999999999999988887765433
No 311
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.51 E-value=0.056 Score=41.30 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=31.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
..+.||.++|.|- +.+|+.+|+.+...|++|.+++.++-++-
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al 60 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL 60 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence 3578999999987 78999999999999999999999885433
No 312
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.47 E-value=0.072 Score=46.31 Aligned_cols=47 Identities=11% Similarity=0.176 Sum_probs=41.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei 145 (159)
++.+|.+++-|+ ||.|+.+++.|++.|+ ++.++.|+.++++++++++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 577899999988 9999999999999995 6999999988888887765
No 313
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=94.47 E-value=0.056 Score=43.16 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=28.2
Q ss_pred CeEEEeCCCCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040 102 EIILLTGAGNG-IGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 102 k~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
.+-.||+.|+| +|.++|++|+++|++|++++++
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence 36678877776 9999999999999999988764
No 314
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.46 E-value=0.074 Score=43.55 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=33.1
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|++++|+|+++++|...++.....|++|+.+++++++.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~ 177 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVA 177 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4789999999999999988777788999988877665433
No 315
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.39 E-value=0.057 Score=44.75 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=33.0
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
+++|||++=||++++.+|.+.|.+|.+..|++.+.++
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~ 37 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence 5799999999999999999999999999998766543
No 316
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=94.38 E-value=0.052 Score=44.46 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=29.1
Q ss_pred EEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCcc
Q psy2040 105 LLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKG 137 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~ 137 (159)
+||||+|=+|..++++|.++| .+|.+.|+++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~ 35 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPP 35 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccc
Confidence 589999999999999999999 788888886543
No 317
>PRK12320 hypothetical protein; Provisional
Probab=94.38 E-value=0.055 Score=50.03 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.4
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++||||+|-||..++++|.++|++|++.++++
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~ 34 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP 34 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 589999999999999999999999999988753
No 318
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.36 E-value=0.14 Score=42.80 Aligned_cols=50 Identities=20% Similarity=0.326 Sum_probs=42.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHHc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
+-.++.+.|.|+ |++|..+|..++..|. .+++.|++++.++..+.+++..
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~ 54 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA 54 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence 345678999998 9999999999999986 7999999999888888887653
No 319
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=94.35 E-value=0.094 Score=41.23 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=36.1
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e 144 (159)
.+.|.||++.+|.+++..|++.|.+|.+.+|++++.++..++
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 367888889999999999999999999999998877766554
No 320
>PRK04148 hypothetical protein; Provisional
Probab=94.30 E-value=0.13 Score=38.19 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
+++.++.-|.+ .|.++|..|++.|.+|+.+|.+++..+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a 55 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKA 55 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 35678888886 77888999999999999999998754444
No 321
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.27 E-value=0.15 Score=43.08 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=42.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC---------------------ccHHHHHHHHHHcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE---------------------KGNNETKQMLEEQGYK 151 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~---------------------~~~~~~~~ei~~~g~~ 151 (159)
..++++.++|.|+ ||+|..+|+.|++.|. ++.++|++. .+.+.+++.+++.+..
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~ 95 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE 95 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC
Confidence 3567888999987 8899999999999997 788898863 2455666777776543
No 322
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=94.27 E-value=0.29 Score=37.26 Aligned_cols=44 Identities=20% Similarity=0.386 Sum_probs=36.4
Q ss_pred CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.....+.||++.|.|. |.||+++|+.+...|++|+..++.....
T Consensus 29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence 3456789999999976 9999999999999999999999987643
No 323
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=94.24 E-value=0.05 Score=36.57 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=21.5
Q ss_pred CCeEEEeCCCCCchHHHHHHHH-HCCCEEEEEcC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFV-QHKVTLVCWDI 133 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la-~~Ga~Vvi~~r 133 (159)
.|.++|+|+|+|.|.+..-.++ ..|++.+.+..
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF 72 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred CceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence 3899999999999999544444 66777766654
No 324
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=94.22 E-value=0.098 Score=42.15 Aligned_cols=40 Identities=25% Similarity=0.353 Sum_probs=34.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|+|+++++|.++++.+...|++++++++++++.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5789999999999999999999999999998888765443
No 325
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.21 E-value=0.16 Score=42.14 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=40.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+++||.++|.|.|.=.|+.++..|.++|+.|.++.+....+++..+
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~ 201 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVR 201 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHh
Confidence 36889999999999999999999999999999999876655554433
No 326
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=94.20 E-value=0.087 Score=44.06 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=33.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
.|++++|+|+++++|...++.....|++|+.+++++++.+.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~ 198 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 198 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 47899999999999999887777889998888777655443
No 327
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.18 E-value=0.093 Score=42.62 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=32.7
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.|++++|+|+++++|...++.....|++|+.+++++++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~ 181 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV 181 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999998877778899998887766543
No 328
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.16 E-value=0.08 Score=35.74 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=33.8
Q ss_pred eEEEeCCCCCchHHHHHHHHHCC---CEEEEE-cCCCccHHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHK---VTLVCW-DIDEKGNNETKQML 145 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~G---a~Vvi~-~r~~~~~~~~~~ei 145 (159)
..+| |+|.+|.++++.+.+.| .+|.+. +|++++.+++.++.
T Consensus 2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 3455 77999999999999999 899865 99998888777654
No 329
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.13 E-value=0.15 Score=42.43 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=36.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+++||.++|-|.+.-.|+.++..|.++|+.|.++......++
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~ 195 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS 195 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence 3688999999999999999999999999999998865544443
No 330
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.10 E-value=0.16 Score=42.45 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=35.0
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDE 135 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~ 135 (159)
+++||.+.|-|.++-.|+.+|..|.++|+.|.++. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 68899999999999999999999999999999995 554
No 331
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.08 E-value=0.087 Score=43.28 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=37.5
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei 145 (159)
++.++|-|+ ||-+++++..|++.|+ +|.+++|+.++.+++++++
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 467888875 9999999999999997 5999999998888887654
No 332
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=93.97 E-value=0.16 Score=41.61 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=37.5
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---ccHHHHHHHHHHcCCC
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---KGNNETKQMLEEQGYK 151 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---~~~~~~~~ei~~~g~~ 151 (159)
.++|||++|-+|.++.+.|.++|.+++..+|+. ...+++.+.+++..++
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd 53 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPD 53 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--S
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCC
Confidence 589999999999999999999999999887653 3445555666655555
No 333
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=93.90 E-value=0.23 Score=45.16 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=35.5
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~ 151 (159)
+.++|||++|=||+.+++.|.++|++|.....+-...+++.+.+++.+.+
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd 430 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNVKPT 430 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhhCCC
Confidence 46999999999999999999999999843222223334555555555555
No 334
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.89 E-value=0.17 Score=41.91 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=39.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCc---cHHHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEK---GNNETKQMLEE 147 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~---~~~~~~~ei~~ 147 (159)
+.++|.++|-|+ ||-+++++..++..|+ ++.+++|+++ +.+++++++..
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~ 173 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE 173 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence 467889999997 6779999999999996 7999999854 67777776644
No 335
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.86 E-value=0.21 Score=41.36 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=38.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+++||.++|-|.|.-.|+.++..|.++|+.|.++....+.+++.
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~ 197 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAH 197 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence 378999999999999999999999999999999876555445443
No 336
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.81 E-value=0.21 Score=41.49 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=39.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++||.++|.|.|.=+|+.++..|.++|+.|.++......+++..
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~ 205 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYT 205 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHH
Confidence 3689999999999999999999999999999999886655555443
No 337
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.75 E-value=0.22 Score=41.36 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=38.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.++.||+++|-|.+.-+|+.++..|.++|++|.++......+++.
T Consensus 154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~ 198 (285)
T PRK14189 154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAH 198 (285)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHH
Confidence 368899999999999999999999999999999887665555443
No 338
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.75 E-value=0.12 Score=45.14 Aligned_cols=41 Identities=12% Similarity=0.320 Sum_probs=36.0
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+.||+++|.|. |.+|+.+|..+...|++|+++++++.+..
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~ 249 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL 249 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence 367999999997 68999999999999999999999876543
No 339
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.72 E-value=0.24 Score=41.14 Aligned_cols=46 Identities=11% Similarity=0.166 Sum_probs=39.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.++.||.++|-|.|.=+|+.++..|.++|+.|.++......+++..
T Consensus 155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~ 200 (284)
T PRK14177 155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIV 200 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 3789999999999999999999999999999999886665555443
No 340
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=93.72 E-value=0.16 Score=44.22 Aligned_cols=43 Identities=12% Similarity=0.312 Sum_probs=36.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+.|++++|.|+ |.||+.++..+...|++|+++++++.+.+..
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A 241 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA 241 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence 467999999988 5799999999999999999999988765543
No 341
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=93.72 E-value=0.09 Score=40.08 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=35.1
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
++.+|+.+-+|+++|..|+++|.+|.+. +.++.+.+..++..+
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~ 43 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE 43 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence 5789999999999999999999999998 555566666665433
No 342
>PLN02503 fatty acyl-CoA reductase 2
Probab=93.71 E-value=0.21 Score=45.58 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=31.7
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDE 135 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~ 135 (159)
+++|.++||||+|=+|+.++++|.+.+. +|++..|..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k 156 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK 156 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5689999999999999999999998764 578887754
No 343
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.65 E-value=0.24 Score=41.12 Aligned_cols=44 Identities=16% Similarity=0.348 Sum_probs=37.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
+++||.++|-|.|.=+|+.++..|.++|+.|.++......+++.
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~ 198 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL 198 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence 68999999999999999999999999999999987655444443
No 344
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.63 E-value=0.16 Score=41.76 Aligned_cols=42 Identities=14% Similarity=0.277 Sum_probs=34.0
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
.+-|-|+ +-+|..+|..++..|++|.+.|++++.+++..+.+
T Consensus 7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i 48 (286)
T PRK07819 7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI 48 (286)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 4445555 79999999999999999999999998877655443
No 345
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.61 E-value=0.12 Score=44.88 Aligned_cols=46 Identities=22% Similarity=0.317 Sum_probs=39.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~e 144 (159)
++.++.++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++.+++
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~ 223 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE 223 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 467899999987 999999999999999 6899999998776666554
No 346
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=93.54 E-value=0.14 Score=40.82 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=34.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|+|+++++|.++++.+...|++++.+++++++.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4678999999999999999999999999998887765443
No 347
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.53 E-value=0.26 Score=40.93 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=38.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+++||+++|-|.|.-+|+.++..|.++|+.|.++......+++.
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~ 195 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV 195 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 368899999999999999999999999999999887665555543
No 348
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.52 E-value=0.27 Score=40.68 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=39.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.|.=.|+.++.-|.++|+.|.++......+++..+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~ 200 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCK 200 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence 6899999999999999999999999999999998766555555443
No 349
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.50 E-value=0.14 Score=44.69 Aligned_cols=41 Identities=20% Similarity=0.328 Sum_probs=34.5
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+.|.||.|++|..+++.+.+.|.+|.+.+|+++..++.++
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~ 42 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK 42 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence 47889999999999999999999999999998766544433
No 350
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=93.48 E-value=0.18 Score=41.73 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=37.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
.+.|.|+ +++|..+|..++..| .+++++|+++++.+..+.+++.
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~ 47 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED 47 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence 4677775 899999999999999 4799999999988888887754
No 351
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.47 E-value=0.17 Score=41.86 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=35.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.+++||.++|.|+++=.|+.++..|.++|++|.++.+..+.
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~ 195 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN 195 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence 36889999999998779999999999999999998885433
No 352
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=93.44 E-value=0.13 Score=44.64 Aligned_cols=47 Identities=21% Similarity=0.356 Sum_probs=39.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei 145 (159)
++.++.++|.|+ |++|..+++.+...|+ +|++++|+.++.++.++++
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 367889999987 9999999999999997 7999999987777666553
No 353
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.41 E-value=0.29 Score=40.66 Aligned_cols=44 Identities=20% Similarity=0.333 Sum_probs=36.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
.++.||.+.+-|.|+=.|+.++..|.++|++|.++....+..++
T Consensus 154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~ 197 (284)
T PRK14179 154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAE 197 (284)
T ss_pred CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 36899999999999999999999999999999998444443443
No 354
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=93.35 E-value=0.16 Score=42.07 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=35.6
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.++.++.++|.|. |++|+.++..+.+.|++|.+++|+.++.
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 3567899999997 6799999999999999999999986543
No 355
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=93.29 E-value=0.28 Score=41.49 Aligned_cols=36 Identities=28% Similarity=0.411 Sum_probs=31.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
.+..+.++|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 466788889888 8999999999999998 89999886
No 356
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=93.26 E-value=0.18 Score=40.20 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=33.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.|++++|+|+++++|.++.+.....|++|+++.+++++.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 177 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC 177 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999999999999999998888766543
No 357
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.24 E-value=0.32 Score=40.39 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=39.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus 153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~ 198 (284)
T PRK14170 153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVA 198 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 3689999999999999999999999999999998876555555443
No 358
>KOG1203|consensus
Probab=93.22 E-value=0.2 Score=43.67 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=39.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
..+...++|.|++|+.|+-+++.|.++|..|...-|+.++.+....
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 4556789999999999999999999999999999998877666644
No 359
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=93.14 E-value=0.39 Score=42.62 Aligned_cols=41 Identities=20% Similarity=0.358 Sum_probs=35.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
..+.||++.|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 46889999999986 599999999999999999998876543
No 360
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.14 E-value=0.33 Score=40.52 Aligned_cols=46 Identities=13% Similarity=0.199 Sum_probs=39.0
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~ 200 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITR 200 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence 6889999999999999999999999999999988765555554433
No 361
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.08 E-value=0.34 Score=40.20 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=38.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
+++||.++|-|.|.=.|+.++.-|.++|+.|.++......+.+.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~ 198 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH 198 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence 68899999999999999999999999999999987655555543
No 362
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.06 E-value=0.36 Score=40.04 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=38.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++.
T Consensus 152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~ 196 (282)
T PRK14169 152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL 196 (282)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 368999999999999999999999999999999886555455443
No 363
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=93.05 E-value=0.11 Score=41.40 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=25.4
Q ss_pred EeCCCCCchHHHHHHHHHCCC--EEEEEcCCCc
Q psy2040 106 LTGAGNGIGRELAKQFVQHKV--TLVCWDIDEK 136 (159)
Q Consensus 106 ITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~ 136 (159)
+||++|-+|..+.++|.+++. +|++..|..+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~ 33 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASS 33 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcc
Confidence 799999999999999999886 8999998764
No 364
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.91 E-value=0.36 Score=40.34 Aligned_cols=47 Identities=11% Similarity=0.191 Sum_probs=39.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus 163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~ 209 (299)
T PLN02516 163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVR 209 (299)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence 36889999999999999999999999999999998766555555433
No 365
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=92.89 E-value=0.14 Score=39.85 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=25.2
Q ss_pred CCCCeEEEeC----------------CCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 99 LEGEIILLTG----------------AGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 99 l~gk~~lITG----------------~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
++||.++||+ +||..|.++|+++..+|++|.++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 3567777776 45679999999999999999887554
No 366
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=92.88 E-value=0.17 Score=42.39 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=27.9
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
|++++|+||++|+|....+-....|+.++++..++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Confidence 89999999999999987777777886665554444
No 367
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=92.87 E-value=0.37 Score=47.17 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=32.1
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCC----CEEEEEcCCCcc
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHK----VTLVCWDIDEKG 137 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~G----a~Vvi~~r~~~~ 137 (159)
.++++|||++|.+|..++++|.++| .+|++..|+...
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~ 1011 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSE 1011 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCCh
Confidence 5789999999999999999999887 788888887543
No 368
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.86 E-value=0.38 Score=40.01 Aligned_cols=45 Identities=13% Similarity=0.319 Sum_probs=38.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~ 200 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSIT 200 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 688999999999999999999999999999998876555555433
No 369
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.81 E-value=0.38 Score=40.12 Aligned_cols=47 Identities=15% Similarity=0.232 Sum_probs=39.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus 156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~ 202 (294)
T PRK14187 156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCS 202 (294)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHh
Confidence 36889999999999999999999999999999998776655554433
No 370
>PLN02996 fatty acyl-CoA reductase
Probab=92.81 E-value=0.16 Score=44.90 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=31.4
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDE 135 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~ 135 (159)
++||+++||||+|-+|+.++++|.+.+. +|++..|..
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 5789999999999999999999987653 577777754
No 371
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.79 E-value=0.4 Score=39.74 Aligned_cols=46 Identities=26% Similarity=0.364 Sum_probs=39.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
++.||.++|-|.|.=.|+.++.-|.++|+.|.++......+++..+
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~ 199 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTR 199 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence 6889999999999999999999999999999988776555554433
No 372
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=92.73 E-value=1.1 Score=40.19 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=32.7
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++|.|+ +.+|+.++++|.++|.++++.|.|+++.++..
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~ 457 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR 457 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 35666665 88999999999999999999999987655553
No 373
>PRK14968 putative methyltransferase; Provisional
Probab=92.65 E-value=0.52 Score=35.21 Aligned_cols=47 Identities=23% Similarity=0.276 Sum_probs=35.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g 149 (159)
+++.++-.|++.|. ++..++++|.+++.+|++++..+...+.++..+
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 69 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNN 69 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcC
Confidence 46788888887775 556666668999999999887777766665544
No 374
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=92.63 E-value=0.22 Score=41.43 Aligned_cols=46 Identities=22% Similarity=0.312 Sum_probs=38.3
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei 145 (159)
+.++.++|.|+ |.+|..+++.+.+.| .+|.+++|++++.++.++++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~ 222 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL 222 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence 57889999987 999999999999876 57888999988777766654
No 375
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=92.63 E-value=0.23 Score=42.48 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=35.6
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
+.++.++|.|+ |++|...++.+.+.|++|.++++++++.+++.
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~ 207 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD 207 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 45677888877 78999999999999999999999877655543
No 376
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.61 E-value=0.45 Score=39.49 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=38.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++.
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~ 197 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGE 197 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 67999999999999999999999999999999987665555544
No 377
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.56 E-value=0.23 Score=43.00 Aligned_cols=37 Identities=22% Similarity=0.460 Sum_probs=32.7
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
+.+|.+.|+|.+ |+|.+.|+.|+++|++|.+.|.+..
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 568899999985 9999999999999999999987654
No 378
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.56 E-value=1.2 Score=37.51 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=34.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
..+.||++.|-|. |.||+++|+.+...|++|...+++.+
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 3578999999988 99999999999999999999998754
No 379
>KOG1204|consensus
Probab=92.54 E-value=0.056 Score=43.71 Aligned_cols=27 Identities=33% Similarity=0.492 Sum_probs=21.2
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHK 125 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~G 125 (159)
..+|++++||+|+|||..++..+.+++
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed 30 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAED 30 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcc
Confidence 357899999999999987776665443
No 380
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=92.53 E-value=0.67 Score=36.38 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=33.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
-+++||.++|-|| |.+|..-++.|.+.|++|.+++.+..
T Consensus 5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 4578999999987 67888889999999999999987543
No 381
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=92.43 E-value=0.32 Score=38.32 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=34.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD 132 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~ 132 (159)
.+++||.++|-|.|.=.|+.++..|.++|+.|.+++
T Consensus 58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 368999999999999999999999999999999995
No 382
>PLN02494 adenosylhomocysteinase
Probab=92.42 E-value=0.29 Score=43.41 Aligned_cols=39 Identities=18% Similarity=0.382 Sum_probs=34.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+
T Consensus 251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3679999999884 99999999999999999999988754
No 383
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=92.38 E-value=0.61 Score=42.94 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=33.4
Q ss_pred CCCCCCCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 96 EKSLEGEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 96 ~~~l~gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
.....+|+++|||++ +.||.+++.+|.+.|++|+....+
T Consensus 391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~ 430 (866)
T COG4982 391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSR 430 (866)
T ss_pred CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEccc
Confidence 345778999999998 579999999999999999986543
No 384
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=92.38 E-value=0.29 Score=39.63 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=33.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+++++|.|+++++|...++...+.|++|+.+++++++.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAAD 185 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 3679999999999999998888889999988887765543
No 385
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=92.38 E-value=0.27 Score=38.54 Aligned_cols=38 Identities=11% Similarity=0.186 Sum_probs=33.7
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.+++||.++|.|| |.+|...++.|.+.|++|.+++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4688999999998 8899999999999999999987653
No 386
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.36 E-value=0.39 Score=39.78 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=39.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++||.++|.|.+.-.|+.++..|..+|++|.++.++...+++..
T Consensus 148 i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~ 193 (279)
T PRK14178 148 ISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL 193 (279)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence 3689999999999999999999999999999999887765544443
No 387
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=92.34 E-value=0.27 Score=39.38 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=35.7
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.|..++|+|+++++|..++......|++|+.+++++++.+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 173 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999888876554443
No 388
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=92.30 E-value=0.27 Score=40.63 Aligned_cols=39 Identities=23% Similarity=0.373 Sum_probs=32.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+.|.| .|-+|.++|..++++|.+|.+.+++++..+...
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 467777 567999999999999999999999987666543
No 389
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=92.29 E-value=0.23 Score=39.58 Aligned_cols=38 Identities=29% Similarity=0.455 Sum_probs=31.9
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.++|-|+ |-.|..+|+.|.++|.+|++.++++++.++.
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~ 39 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEF 39 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHH
Confidence 3455554 8899999999999999999999999887763
No 390
>KOG1429|consensus
Probab=92.19 E-value=0.25 Score=41.38 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=33.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
+..++.++||||+|=||..+|.+|..+|..|+..|.-
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence 4567899999999999999999999999999998863
No 391
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=92.18 E-value=0.49 Score=40.59 Aligned_cols=47 Identities=17% Similarity=0.213 Sum_probs=40.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus 227 i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r 273 (364)
T PLN02616 227 VEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR 273 (364)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHh
Confidence 36899999999999999999999999999999998766655555443
No 392
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.13 E-value=0.27 Score=40.10 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=33.6
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+.|-|+ +-+|..+|..+++.|.+|.+.|++++..++..+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 4566666 789999999999999999999999888777654
No 393
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=92.12 E-value=0.32 Score=39.28 Aligned_cols=45 Identities=31% Similarity=0.474 Sum_probs=37.9
Q ss_pred EEEeCCCCCchHHHHHHHHHCC----CEEEEEcCCCccHHHHHHHHHHc
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHK----VTLVCWDIDEKGNNETKQMLEEQ 148 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~G----a~Vvi~~r~~~~~~~~~~ei~~~ 148 (159)
+.|.|++|.+|..++..++..| .++++.|+++++++....+++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~ 49 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA 49 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence 3578997889999999999999 68999999998888877777543
No 394
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=92.05 E-value=0.52 Score=40.16 Aligned_cols=46 Identities=15% Similarity=0.217 Sum_probs=38.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus 210 i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~ 255 (345)
T PLN02897 210 VEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQIT 255 (345)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHH
Confidence 3688999999999999999999999999999998876555555443
No 395
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.01 E-value=0.49 Score=40.39 Aligned_cols=53 Identities=28% Similarity=0.266 Sum_probs=40.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGYK 151 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~~ 151 (159)
.+.++.++|-|+ ||+|..+++.|++.|. ++.++|.+ ..+.+.+++.+++.+..
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 204 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD 204 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC
Confidence 355667777755 8999999999999997 68888887 44667777778776543
No 396
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=91.98 E-value=0.55 Score=38.98 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=39.7
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.|.=.|+-++..|...|+.|.++......+.+..+
T Consensus 153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k 198 (283)
T COG0190 153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITK 198 (283)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhh
Confidence 7899999999999999999999999999999998776655554443
No 397
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=91.97 E-value=0.34 Score=38.60 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=32.5
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~ 134 (159)
+++++.+++-|+ ||.|.++++.+.+.|. ++++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 577889999988 9999999999999997 49999998
No 398
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=91.96 E-value=0.33 Score=37.66 Aligned_cols=39 Identities=21% Similarity=0.312 Sum_probs=33.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|+|+++ +|.++++.....|.+|+.+++++++.+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~ 172 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE 172 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 578999999988 999999888889999999988765443
No 399
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=91.96 E-value=0.29 Score=34.03 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=29.1
Q ss_pred EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
++|.|. +.+|+.+++.|.+.+.+|++++++++..++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~ 37 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL 37 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH
Confidence 356666 5799999999999777999999988764443
No 400
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=91.91 E-value=0.15 Score=35.55 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=31.2
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
+++||.++|.|| |..|..-++.|.+.|++|.+++.+.
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 578999999998 8899999999999999999988774
No 401
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=91.88 E-value=0.36 Score=36.37 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=31.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD 132 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~ 132 (159)
.+++||.++|-|| |.+|...++.|.+.|++|.+++
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 4789999999987 7789999999999999998885
No 402
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=91.87 E-value=0.35 Score=38.41 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=33.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.++.++|+|+++++|..++..+...|++|+.++++.++
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 176 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK 176 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence 47899999999999999999999999999888776544
No 403
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=91.83 E-value=0.44 Score=35.11 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=38.7
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE 147 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~ 147 (159)
.+.|.|++|.+|..+|..+...|. ++++.|++++.++..+.+++.
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~ 48 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH 48 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence 477999999999999999998874 699999998888877777754
No 404
>PLN00203 glutamyl-tRNA reductase
Probab=91.80 E-value=0.26 Score=44.17 Aligned_cols=46 Identities=20% Similarity=0.318 Sum_probs=40.6
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei 145 (159)
+.++.++|-|+ |++|..+++.|...|+ +|++++|+.++.+++.+++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 67899999988 9999999999999997 6999999988888777654
No 405
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=91.77 E-value=0.38 Score=38.79 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=33.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+.+++|+|+++++|...++.....|++|+.+++++++.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3679999999999999999888899999988887665433
No 406
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=91.70 E-value=0.35 Score=39.19 Aligned_cols=40 Identities=13% Similarity=0.175 Sum_probs=33.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+++++|.|+++++|.++++...+.|++|+.+++++++.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~ 184 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR 184 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4789999999999999999888899999988877664433
No 407
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=91.70 E-value=0.36 Score=41.04 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=33.1
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.|+++.|+|.+ |+|....+-....|++|+..++++++.+..
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a 206 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA 206 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence 48999999998 999865554455899999999998875544
No 408
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=91.67 E-value=0.33 Score=40.29 Aligned_cols=39 Identities=23% Similarity=0.477 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|++++|.|+ +++|...+......|++|+.+++++++.+
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~ 204 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE 204 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 4789999999 99999988888888999988888765543
No 409
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.65 E-value=0.42 Score=39.04 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=33.5
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e 144 (159)
+.+.|-|+ |.+|.++|..+++.|.+|.+.|++++..+...++
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT 46 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 34555554 8899999999999999999999998877665443
No 410
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=91.65 E-value=0.37 Score=38.03 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=30.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~ 134 (159)
..++.+.++|-|+ +|+|..+++.|++.|.. +.++|.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3466778888885 89999999999999974 8888876
No 411
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.63 E-value=0.37 Score=39.42 Aligned_cols=42 Identities=17% Similarity=0.324 Sum_probs=33.5
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e 144 (159)
+.+.|-|+ |-+|.++|..+++.|.+|+++|++++..++..+.
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL 45 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 34555555 7799999999999999999999998877655443
No 412
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=91.57 E-value=0.35 Score=40.10 Aligned_cols=39 Identities=18% Similarity=0.405 Sum_probs=31.7
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~ 139 (159)
.|++++|+|+ +++|...+.-....|+ +|+++++++++.+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~ 208 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLS 208 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence 5789999986 8999998877777898 5888888876654
No 413
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.54 E-value=0.7 Score=38.39 Aligned_cols=46 Identities=15% Similarity=0.325 Sum_probs=38.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHH--CCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~--~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
++.||.++|-|.|.-+|+.++..|.+ +|+.|.++......+++..+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k 202 (284)
T PRK14193 155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTR 202 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHH
Confidence 68899999999999999999999998 79999998766555554433
No 414
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=91.49 E-value=0.4 Score=39.70 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=31.6
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|++++|.|+ +++|...+......|++|+.+++++++.+
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~ 203 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR 203 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 4789999997 89998877666678999988888876643
No 415
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=91.42 E-value=0.78 Score=36.32 Aligned_cols=53 Identities=23% Similarity=0.281 Sum_probs=38.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGYK 151 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~~ 151 (159)
.+.++.++|-|+ +|+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+++.++.
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 90 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD 90 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC
Confidence 456778888875 8999999999999997 56666443 23456677777776653
No 416
>PLN02928 oxidoreductase family protein
Probab=91.34 E-value=1.9 Score=36.61 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=34.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
..+.||++.|-|. |.||+++|+.+...|++|+..+|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 3688999999987 8999999999999999999998863
No 417
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.24 E-value=0.45 Score=38.86 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=32.9
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e 144 (159)
.+.|-| +|-+|.++|..+++.|.+|.+.|++++.+++..+.
T Consensus 5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 455555 48899999999999999999999998776665543
No 418
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=91.18 E-value=0.2 Score=37.57 Aligned_cols=34 Identities=9% Similarity=0.230 Sum_probs=29.1
Q ss_pred CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 110 GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 110 s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+-.|..+|+.|.++|++|.+.+|++++.+++.+
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 42 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE 42 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence 3789999999999999999999999877776654
No 419
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.13 E-value=0.81 Score=38.06 Aligned_cols=46 Identities=22% Similarity=0.345 Sum_probs=38.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.|.=+|+.++.-|.++ |+.|.++......+++..+
T Consensus 150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~ 199 (287)
T PRK14181 150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILK 199 (287)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHh
Confidence 688999999999999999999999998 7999988765555555433
No 420
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=91.12 E-value=0.53 Score=37.46 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=31.8
Q ss_pred EEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHH
Q psy2040 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQML 145 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei 145 (159)
..-+|++-||.+++++|++.|++|++..|+. ++.+...+++
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l 45 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL 45 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence 4567889999999999999999999986654 4455555544
No 421
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=91.08 E-value=0.52 Score=37.69 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=33.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.|++++|.|+++++|.+..+.....|++|+.+..++++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 180 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA 180 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999999888888999998887766443
No 422
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.06 E-value=0.69 Score=38.46 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=38.4
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~ 142 (159)
+++||.++|-|.|.=.|+.++.-|.+ +|++|.++..+...+++..
T Consensus 154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~ 202 (286)
T PRK14184 154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEEC 202 (286)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHH
Confidence 67899999999999999999999998 8999999877665554443
No 423
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.05 E-value=0.46 Score=40.00 Aligned_cols=41 Identities=17% Similarity=0.336 Sum_probs=32.1
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+.+-|-| +|-+|..+|..++..|++|.+.|++++..++..+
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 3444554 4779999999999999999999999876655444
No 424
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=90.98 E-value=0.47 Score=38.52 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=33.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|+.++|.|+++++|.++++.....|++|+.+++++++.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4789999999999999988888888999988877665433
No 425
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=90.97 E-value=1 Score=35.92 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEE-EEcC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV-CWDI 133 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vv-i~~r 133 (159)
.+++++.+.|-| .+.+|+..++.|.+.|++|+ +.|.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 457889999887 59999999999999999988 6666
No 426
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=90.86 E-value=0.79 Score=38.96 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=41.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGYK 151 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~~ 151 (159)
..++++.++|-|+ +|+|..+++.|+..|. ++.++|.+. .+.+.+++.+++.+..
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~ 97 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD 97 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC
Confidence 3467788888877 8999999999999996 577777653 3456677777777654
No 427
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=90.75 E-value=0.2 Score=39.20 Aligned_cols=37 Identities=24% Similarity=0.500 Sum_probs=32.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
..+..+.+.|-|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3566778888887 8999999999999998 69998887
No 428
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=90.69 E-value=0.56 Score=37.07 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=33.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.|+.++|.|+++++|.+.++.....|++|+..++++++.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 174 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKA 174 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 478999999999999999988888999998887765543
No 429
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=90.67 E-value=0.5 Score=37.24 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=30.4
Q ss_pred CCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040 101 GEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 101 gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~ 136 (159)
+|++.|+++.||.|+.+ |..+++.|.+|.++|.+..
T Consensus 1 ~~ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~~ 41 (261)
T TIGR01968 1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIG 41 (261)
T ss_pred CeEEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 57899999999999954 6778889999999988753
No 430
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=90.66 E-value=1.4 Score=34.08 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=30.3
Q ss_pred CCCeEEEeCCCCCchHHH-----HHHHHH-CCCEEEEEcCCCc
Q psy2040 100 EGEIILLTGAGNGIGREL-----AKQFVQ-HKVTLVCWDIDEK 136 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~i-----a~~la~-~Ga~Vvi~~r~~~ 136 (159)
.+|++.++++.+|.|+.. |..+++ .|.+|.++|-+..
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~~ 76 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLR 76 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 478999999999999954 567775 5999999887754
No 431
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=90.64 E-value=0.55 Score=41.70 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=31.1
Q ss_pred CCCCCCeEEEeCC----------------CCCchHHHHHHHHHCCCEEEEEc
Q psy2040 97 KSLEGEIILLTGA----------------GNGIGRELAKQFVQHKVTLVCWD 132 (159)
Q Consensus 97 ~~l~gk~~lITG~----------------s~GIG~~ia~~la~~Ga~Vvi~~ 132 (159)
.++.||.++||+| ||-.|.++|++++.+|++|.++.
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~ 303 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS 303 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence 3589999999984 55689999999999999998864
No 432
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=90.60 E-value=0.52 Score=40.99 Aligned_cols=40 Identities=13% Similarity=0.243 Sum_probs=34.8
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.+.||+++|.|. |.+|+.+++.+...|++|+++++++.+.
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~ 231 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRA 231 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence 467999999986 7799999999999999999999887553
No 433
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=90.59 E-value=0.55 Score=37.84 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=32.3
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
+..++|.|+++++|.+++......|++|+++++++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~ 184 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQA 184 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 46899999999999999888888999998888876543
No 434
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=90.54 E-value=0.5 Score=40.61 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=37.5
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
...++++|.|+ |.+|+.+++.|.+.|.+|++++++++..++..+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~ 272 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE 272 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 45688999998 999999999999999999999998876655544
No 435
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=90.44 E-value=0.4 Score=41.25 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=34.0
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.++|.|+ |.+|..+++.|.++|.+|++++++++..++..+
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~ 41 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD 41 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 5778887 999999999999999999999998877665543
No 436
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=90.38 E-value=0.52 Score=38.02 Aligned_cols=38 Identities=16% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.|..++|.|+++++|.+.++.....|++++.+..+.++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~ 176 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG 176 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 47899999999999999998888899998887665544
No 437
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=90.27 E-value=0.62 Score=37.63 Aligned_cols=38 Identities=16% Similarity=0.275 Sum_probs=32.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.|..++|.|+++++|.++++.....|++++++.+++++
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~ 177 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK 177 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 46899999999999999999999999998777766544
No 438
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=90.24 E-value=2.5 Score=35.23 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
..+.||++-|-|- |.||+++|+.+...|++|...++..
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence 4688999999987 8999999999999999999998753
No 439
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=90.23 E-value=3.3 Score=34.86 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=34.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
..+.|+++-|-|. |.||+++|+.+...|++|+..+++++.
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 4678999888876 779999999999999999999987643
No 440
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=90.21 E-value=0.58 Score=39.47 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=33.7
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|..++|+|+++++|.+.+......|++++++++++++.+
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~ 232 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE 232 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 4789999999999999998888889999888877665544
No 441
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=90.11 E-value=1.1 Score=36.60 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=31.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.|+.++|.|+++++|.+.++.....|++++....+.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 4789999999999999998888889999888766553
No 442
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=90.10 E-value=1.3 Score=32.13 Aligned_cols=30 Identities=33% Similarity=0.620 Sum_probs=24.8
Q ss_pred EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
+++-|+ +|+|.++++.|++.|. ++.++|.+
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 566665 8999999999999997 68887754
No 443
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=90.10 E-value=2.1 Score=29.03 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=38.2
Q ss_pred CCeEEEeCCCCCchHHHHHHHHH--CCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS 159 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~--~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D 159 (159)
|+.++--|++.| . .+..+++ .|++|+.+|.+++..+.+.+...+. +.+ +.+++.|
T Consensus 2 ~~~vLDlGcG~G--~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-i~~~~~d 60 (112)
T PF12847_consen 2 GGRVLDLGCGTG--R-LSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDR-ITFVQGD 60 (112)
T ss_dssp TCEEEEETTTTS--H-HHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTT-EEEEESC
T ss_pred CCEEEEEcCcCC--H-HHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCC-eEEEECc
Confidence 566777777665 2 2334444 8999999999998888887777443 345 7777665
No 444
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=90.09 E-value=0.59 Score=39.63 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.|.+++|.|+++++|...++.....|+++++.++++++.
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~ 227 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA 227 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence 478999999999999999988888999988877665443
No 445
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.05 E-value=1.1 Score=37.47 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=38.1
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++||.++|-|.|.=+|+.++.-|.++ |+.|.++......+++..
T Consensus 157 i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~ 206 (297)
T PRK14168 157 VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHC 206 (297)
T ss_pred CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHH
Confidence 3688999999999999999999999988 799998876555554433
No 446
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=90.03 E-value=0.52 Score=38.69 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=31.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~ 139 (159)
.|++++|+|+ +++|...+......|++ |+++++++++.+
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~ 202 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLE 202 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 3789999975 89999998888889998 888887765543
No 447
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=90.02 E-value=0.65 Score=37.79 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCcc
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKG 137 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~ 137 (159)
|.+++|.|+++++|.+.++..... |++|+.+..++++
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~ 186 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPES 186 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHH
Confidence 789999999999999987555555 9999888776544
No 448
>KOG0025|consensus
Probab=90.00 E-value=1.1 Score=37.74 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=45.4
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~ 151 (159)
|.+++.-|++++.|++..+-....|.+-+-+-|+.+..+++.++++..|..
T Consensus 161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~ 211 (354)
T KOG0025|consen 161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGAT 211 (354)
T ss_pred CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCc
Confidence 669999999999999987777778998888889989999999999988876
No 449
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=89.95 E-value=1.1 Score=35.93 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=29.0
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
.+++..++|-|+ +|+|..+++.|++.|. ++.++|.+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 355677888876 8999999999999996 67777754
No 450
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=89.90 E-value=3.5 Score=37.66 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=33.5
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.++++|.|+ +.+|+.+++.|.++|.++++.|.|+++.++.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~ 439 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETL 439 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHH
Confidence 356777766 7899999999999999999999998776555
No 451
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=89.82 E-value=0.77 Score=37.40 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=34.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~ 140 (159)
.+..++|.|+++++|..+++.....|++++.+++++++.+.
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~ 202 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI 202 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46799999999999999999999999999888887655443
No 452
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=89.80 E-value=0.73 Score=35.82 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=33.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.|.+++|.|+++++|...+......|++|+.+++++++.+
T Consensus 104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4679999999999999998888888999988887665443
No 453
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=89.78 E-value=0.76 Score=37.77 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=33.0
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e 144 (159)
.+-|-|+ |-+|.++|..+++.|++|++++++++..++..+.
T Consensus 6 ~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 6 NLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 3444554 7799999999999999999999998877766553
No 454
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=89.71 E-value=1.1 Score=36.79 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=30.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~ 134 (159)
..+++..++|-|+ ||+|..+|+.|++.| .++.++|.+
T Consensus 26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4566778888866 799999999999999 578887764
No 455
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=89.70 E-value=0.6 Score=37.56 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=30.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~ 138 (159)
.|++++|.|+ +++|...+......|++ |+.+++++++.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 5789999976 89999988887788987 77777766554
No 456
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.69 E-value=1.2 Score=37.22 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=38.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHH
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~ 142 (159)
.+++||+++|-|.|.=.|+.++.-|.+ +|++|.++..+...+++..
T Consensus 155 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~ 204 (295)
T PRK14174 155 IETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYT 204 (295)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHH
Confidence 368899999999999999999999987 7899999887765554443
No 457
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=89.67 E-value=0.71 Score=37.15 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=32.9
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
.|.+++|.|+++++|.++++.....|+++++...++++
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~ 175 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ 175 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence 47899999999999999999999999999887776544
No 458
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=89.63 E-value=0.88 Score=30.39 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=31.5
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDI 133 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r 133 (159)
.++++|.+.+-|+ ++.|+.++..+.+. +.++.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4578899999999 99999999999998 577888877
No 459
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=89.63 E-value=1.9 Score=33.76 Aligned_cols=56 Identities=23% Similarity=0.286 Sum_probs=39.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS 159 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D 159 (159)
++..++=-|++.| + =+.-||++|++|..+|.++...+.+.+..++++.+ +....+|
T Consensus 30 ~~g~~LDlgcG~G--R-NalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~-i~~~~~D 85 (192)
T PF03848_consen 30 KPGKALDLGCGEG--R-NALYLASQGFDVTAVDISPVALEKLQRLAEEEGLD-IRTRVAD 85 (192)
T ss_dssp -SSEEEEES-TTS--H-HHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-T-EEEEE-B
T ss_pred CCCcEEEcCCCCc--H-HHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCce-eEEEEec
Confidence 4557777777655 3 25678999999999999999888887777777777 7666655
No 460
>CHL00175 minD septum-site determining protein; Validated
Probab=89.60 E-value=0.71 Score=37.35 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=31.5
Q ss_pred CCCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040 100 EGEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~ 136 (159)
.+|++.|+++.+|.|+.+ |..|++.|.+|.++|.+..
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D~~ 55 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIG 55 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 368999999999999965 6778889999999888763
No 461
>PLN03139 formate dehydrogenase; Provisional
Probab=89.59 E-value=2.7 Score=36.36 Aligned_cols=38 Identities=29% Similarity=0.375 Sum_probs=33.9
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
.++.||++-|-|. |.||+.+|+.+...|++|...+++.
T Consensus 195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4689999999985 7799999999999999999988864
No 462
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.54 E-value=1.2 Score=37.27 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=37.6
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~ 142 (159)
+++||.++|-|.|.=+|+.++.-|.++ ++.|.++......+++..
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~ 202 (297)
T PRK14167 154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKT 202 (297)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHH
Confidence 689999999999999999999999988 899998766555554443
No 463
>PRK06932 glycerate dehydrogenase; Provisional
Probab=89.45 E-value=2.7 Score=35.10 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=33.0
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
..+.||++-|-|- |.||+++|+.+...|++|+..++.
T Consensus 143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~ 179 (314)
T PRK06932 143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHK 179 (314)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence 4688999999987 899999999999999999988875
No 464
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=89.42 E-value=1.1 Score=35.26 Aligned_cols=41 Identities=7% Similarity=0.063 Sum_probs=32.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.+..+++-|++.| .=+..||++|++|+.+|.++...+.+.+
T Consensus 34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~ 74 (213)
T TIGR03840 34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFA 74 (213)
T ss_pred CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 4568999999777 2356788999999999999988776543
No 465
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=89.33 E-value=0.86 Score=36.81 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=33.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.+++++|.|+++++|...++.....|++|+.++.++++.+
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~ 185 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD 185 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4679999999999999998888889999988776665433
No 466
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=89.28 E-value=0.86 Score=37.26 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=31.1
Q ss_pred eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+-|-|+ +-+|.++|..++..|.+|++.|++++..++.
T Consensus 6 ~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 43 (295)
T PLN02545 6 KVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRG 43 (295)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 4555554 7899999999999999999999998776543
No 467
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.27 E-value=1.4 Score=36.87 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=38.1
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+++||.++|-|.|.=.|+.++.-|.++ ++.|.++......+++..+
T Consensus 154 ~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~ 203 (293)
T PRK14185 154 ETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECL 203 (293)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHh
Confidence 688999999999999999999999988 6899988665555555443
No 468
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=89.08 E-value=0.84 Score=38.32 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=31.3
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.|++++|.|+ +++|...+......|++|++++.+.++..+.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~ 223 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA 223 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence 4788999664 8999998888778899988877765544333
No 469
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=89.06 E-value=1.2 Score=35.16 Aligned_cols=40 Identities=10% Similarity=0.073 Sum_probs=32.0
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+..+++-|++.| .-+..||++|++|+.+|.++...+.+.+
T Consensus 38 ~~rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~ 77 (218)
T PRK13255 38 GSRVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFA 77 (218)
T ss_pred CCeEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHH
Confidence 568999998776 3466788999999999999988776543
No 470
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=89.05 E-value=4.8 Score=36.60 Aligned_cols=39 Identities=13% Similarity=0.292 Sum_probs=32.8
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
.+++|.|. +.+|+.+++.|.++|.++++.|.|+++.++.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~ 439 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLM 439 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHH
Confidence 46777774 8899999999999999999999998765544
No 471
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=88.95 E-value=0.87 Score=35.67 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=28.8
Q ss_pred CeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCC
Q psy2040 102 EIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 102 k~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~ 135 (159)
|++.+.++.||.|+. +|..|+++|.+|.++|.+.
T Consensus 1 ~ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 1 RIITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478899999999995 4677888999999998775
No 472
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=88.93 E-value=0.84 Score=40.09 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=33.3
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
..+.+|.+.|-| .||.|.++++.|.+.|++|.+.|++...
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~ 50 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETA 50 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHH
Confidence 345678888888 5889999999999999999999986543
No 473
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=88.83 E-value=0.61 Score=36.02 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=25.2
Q ss_pred CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
|.+-+|..+|..||+.|.+|+.+|.++++.+++
T Consensus 7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l 39 (185)
T PF03721_consen 7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEAL 39 (185)
T ss_dssp --STTHHHHHHHHHHTTSEEEEE-S-HHHHHHH
T ss_pred CCCcchHHHHHHHHhCCCEEEEEeCChHHHHHH
Confidence 668899999999999999999999987655443
No 474
>PRK07574 formate dehydrogenase; Provisional
Probab=88.72 E-value=3.9 Score=35.32 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=33.8
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
..+.||++-|-|. |.||+++|+.+...|++|...+|..
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 4588999999887 7799999999999999999999865
No 475
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=88.62 E-value=0.83 Score=37.97 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=29.0
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
.|+.++|.|+ +++|...+..+...|++|++++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 5788999985 999999887777889999998884
No 476
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=88.62 E-value=0.98 Score=37.05 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~ 139 (159)
.++.++|.| ++++|...+......|++|+.+++++++.+
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~ 201 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKAD 201 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 478999999 799999988888889999998888765543
No 477
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=88.62 E-value=1.6 Score=28.40 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=32.9
Q ss_pred EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--------HHHHHHHHHHcCCC
Q psy2040 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--------NNETKQMLEEQGYK 151 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--------~~~~~~ei~~~g~~ 151 (159)
+|- |++-+|.++|..+++.|.+|.++.+++.- .+.+.+.+++.|.+
T Consensus 3 vVi-GgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~ 56 (80)
T PF00070_consen 3 VVI-GGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVE 56 (80)
T ss_dssp EEE-SSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEE
T ss_pred EEE-CcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCE
Confidence 444 44789999999999999999998876432 23345556666654
No 478
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=88.61 E-value=0.87 Score=38.23 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~ 139 (159)
.|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~ 224 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFE 224 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 4789999975 8999998877777898 7888887765543
No 479
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=88.60 E-value=1.4 Score=37.81 Aligned_cols=37 Identities=27% Similarity=0.412 Sum_probs=30.4
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
..++++.++|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3466777888876 8999999999999996 78888775
No 480
>PLN02740 Alcohol dehydrogenase-like
Probab=88.52 E-value=0.89 Score=38.36 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=31.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN 139 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~ 139 (159)
.|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 5789999985 8999998888888898 5888888766544
No 481
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=88.45 E-value=1.1 Score=36.36 Aligned_cols=43 Identities=26% Similarity=0.318 Sum_probs=36.3
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
++.|+.++=-||++| .+++.+|+.|++|...|.+++..+....
T Consensus 57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ 99 (243)
T COG2227 57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKL 99 (243)
T ss_pred CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHH
Confidence 378999999999998 6889999999999999998876665443
No 482
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=88.37 E-value=2.3 Score=32.77 Aligned_cols=48 Identities=15% Similarity=0.241 Sum_probs=35.5
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~ 150 (159)
.++.++--|++.|. .+..++++|++|..+|.+++..+.+.+..++.+.
T Consensus 30 ~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~ 77 (197)
T PRK11207 30 KPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENL 77 (197)
T ss_pred CCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 45678888887764 4567888899999999998777766665555443
No 483
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=88.36 E-value=1.1 Score=36.36 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccH
Q psy2040 101 GEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGN 138 (159)
Q Consensus 101 gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~ 138 (159)
|.+++|.|+++++|...+......| ++|+.++.++++.
T Consensus 150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~ 188 (336)
T cd08252 150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESI 188 (336)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhH
Confidence 7899999999999999998888899 9998887765443
No 484
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=88.28 E-value=0.9 Score=40.50 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=33.5
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
+.+-|-|+ |-.|..+|..+++.|.+|.+.+++++.+++..+
T Consensus 6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~ 46 (503)
T TIGR02279 6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAIA 46 (503)
T ss_pred cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 34556665 789999999999999999999999888776544
No 485
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=88.24 E-value=0.83 Score=39.05 Aligned_cols=42 Identities=14% Similarity=0.213 Sum_probs=31.7
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~~~~~~~ 141 (159)
.|.+++|.|+++++|...+......|+ +|+.+++++++.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 478999999999999987765555443 788888877665543
No 486
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=88.22 E-value=1.8 Score=34.72 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=28.9
Q ss_pred CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040 98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID 134 (159)
Q Consensus 98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~ 134 (159)
.++++.++|-|+ ||+|..+++.|++.|. ++.++|.+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 456777888876 8999999999999996 57777664
No 487
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=88.20 E-value=0.86 Score=37.87 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=31.2
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHH-C-CCEEEEEcCCCccHHHH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQ-H-KVTLVCWDIDEKGNNET 141 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~-~-Ga~Vvi~~r~~~~~~~~ 141 (159)
.|.+++|+|+ +++|...+..+.+ . +.+|+++++++++.+.+
T Consensus 163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a 205 (341)
T cd08237 163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLF 205 (341)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH
Confidence 4789999995 9999987776654 4 46788889887765543
No 488
>PRK06487 glycerate dehydrogenase; Provisional
Probab=88.20 E-value=3.4 Score=34.52 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=33.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~ 134 (159)
..+.||++-|-|- |.||+++|+.+...|++|+..++.
T Consensus 144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 3588999999987 899999999999999999988875
No 489
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=88.10 E-value=1.1 Score=36.68 Aligned_cols=39 Identities=18% Similarity=0.410 Sum_probs=33.8
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN 138 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~ 138 (159)
.+.+++|.|+++++|.+.++...+.|++|+.+.+++++.
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~ 203 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKL 203 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 478999999999999999999999999999888776543
No 490
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=88.04 E-value=3.5 Score=35.25 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=32.4
Q ss_pred CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
..+.+.|-||.|.+|..+|+.|.+.|..|.+.+++.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 346789999999999999999999999999999864
No 491
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=88.01 E-value=0.79 Score=37.36 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=28.7
Q ss_pred CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040 109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141 (159)
Q Consensus 109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~ 141 (159)
|.+-+|..++..+++.|.+|.+.+|++++.+++
T Consensus 6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~ 38 (291)
T TIGR01505 6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL 38 (291)
T ss_pred EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence 568899999999999999999999998766554
No 492
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=87.96 E-value=0.57 Score=34.91 Aligned_cols=38 Identities=24% Similarity=0.388 Sum_probs=30.3
Q ss_pred EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143 (159)
Q Consensus 105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ 143 (159)
.|-|+ |..|.++|..++++|.+|.+.+|+++..++..+
T Consensus 3 ~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~ 40 (157)
T PF01210_consen 3 AVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINE 40 (157)
T ss_dssp EEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHH
T ss_pred EEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 34444 677999999999999999999999866665544
No 493
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=87.96 E-value=1 Score=40.12 Aligned_cols=43 Identities=16% Similarity=0.285 Sum_probs=34.4
Q ss_pred CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145 (159)
Q Consensus 102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei 145 (159)
+.+-|-|+ |-+|..+|..++..|++|++.|++++.+++..+.+
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i 50 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGI 50 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence 34555565 78999999999999999999999998877754443
No 494
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=87.95 E-value=0.93 Score=37.58 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=31.8
Q ss_pred CCCCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040 99 LEGEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~ 136 (159)
-.+|++.++|+.||.|+.+ |..++++|.+|.++|-+..
T Consensus 91 ~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~ 133 (322)
T TIGR03815 91 ARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPW 133 (322)
T ss_pred CCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence 3589999999999999965 6778889999999887643
No 495
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.87 E-value=1.7 Score=37.96 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=36.3
Q ss_pred CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCC
Q psy2040 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGY 150 (159)
Q Consensus 99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~ 150 (159)
+.+|.+.|.|. ++.|.++|+.|.+.|+.|.+.|+++. ......+++++.|.
T Consensus 12 ~~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi 63 (458)
T PRK01710 12 IKNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGV 63 (458)
T ss_pred hcCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCC
Confidence 45778888876 56788999999999999999998653 22233344555453
No 496
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=87.78 E-value=0.86 Score=34.08 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=27.0
Q ss_pred EEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCcc
Q psy2040 104 ILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEKG 137 (159)
Q Consensus 104 ~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~~ 137 (159)
+.|+++.||.|+. +|..++++|.+|.++|.+.+.
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~~~ 39 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDPQA 39 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEESTTS
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccCccc
Confidence 4688999999994 578888999999999886543
No 497
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=87.78 E-value=1.2 Score=34.13 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=30.4
Q ss_pred CCeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCc
Q psy2040 101 GEIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 101 gk~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~ 136 (159)
.|++.||++.+|.|+. +|..+++.|.+|.++|-+..
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~~ 57 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMR 57 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 6899999999999984 46778889999999887654
No 498
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=87.76 E-value=4.4 Score=33.85 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=33.2
Q ss_pred CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136 (159)
Q Consensus 97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~ 136 (159)
..+.||++.|-|- |.||+++|+.+...|++|...++..+
T Consensus 132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4678999888865 88999999999999999999887543
No 499
>PRK06436 glycerate dehydrogenase; Provisional
Probab=87.76 E-value=4.2 Score=33.90 Aligned_cols=39 Identities=21% Similarity=0.241 Sum_probs=33.8
Q ss_pred CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135 (159)
Q Consensus 96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~ 135 (159)
...+.||++-|-|- |.||+++|+.+...|++|..++|+.
T Consensus 117 ~~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~ 155 (303)
T PRK06436 117 TKLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY 155 (303)
T ss_pred CCCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34688999999977 8899999999888999999999853
No 500
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=87.74 E-value=0.62 Score=33.88 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=28.2
Q ss_pred CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040 109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142 (159)
Q Consensus 109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~ 142 (159)
|.+++|.-+|..|++.|.+|.+++|++ ..++..
T Consensus 5 G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~ 37 (151)
T PF02558_consen 5 GAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK 37 (151)
T ss_dssp STSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH
T ss_pred CcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhh
Confidence 457899999999999999999999988 666643
Done!