RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2040
(159 letters)
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 92.3 bits (230), Expect = 1e-23
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 81 YSALESILLT-LIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139
S E++ +P KS+ GEI+L+TGAG+GIGR A +F + K LV WDI++ G
Sbjct: 10 SSGRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE 69
Query: 140 ETKQMLEEQGYKNIHTYK 157
ET + G K +HT+
Sbjct: 70 ETAAKCKGLGAK-VHTFV 86
Score = 25.7 bits (57), Expect = 7.2
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 20 YSALESILLT-LIPPSEKSLEGEIIL 44
S E++ +P KS+ GEI+L
Sbjct: 10 SSGRENLYFQGHMPKRRKSVTGEIVL 35
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 63.5 bits (155), Expect = 7e-13
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+G ++TG +GIG A +F + LV D+D+ + L QG
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG 79
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 61.7 bits (150), Expect = 4e-12
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
K G +TG NG+G L +Q + + DI + ++ LE +G
Sbjct: 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG 56
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
P + L IIL+TGA +GIGRE A + ++ T++ +E+ + + E+ +
Sbjct: 5 PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 62
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 58.3 bits (142), Expect = 4e-11
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
S +SL+ +++++TGAG+GIGR +AK+F + +V ++ E N+ Q L G +
Sbjct: 1 SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE 57
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 57.2 bits (139), Expect = 1e-10
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
K G++ L+TGAG IG A + + + D++ + + + + E+G +
Sbjct: 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE 57
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 56.0 bits (136), Expect = 3e-10
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 89 LTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148
+T ++L+TG G+G+GR A + L D+ +G +K + E
Sbjct: 1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 60
Query: 149 G 149
Sbjct: 61 A 61
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 55.6 bits (135), Expect = 4e-10
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ L+G +IL+TGA GIG A+ + H ++V E E ++ G
Sbjct: 7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP 64
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 54.4 bits (132), Expect = 1e-09
Identities = 10/54 (18%), Positives = 22/54 (40%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+ + ++TG IG + ++ D+DE + + L +G+
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD 63
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 53.4 bits (129), Expect = 3e-09
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ +++TG+ NGIGR A F Q + + ET+Q++ + G
Sbjct: 2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS 56
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
LEG+I ++TGA +GIGR A F + +V + E + G +
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE 58
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 52.9 bits (128), Expect = 3e-09
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
P E ++ ++TG+G GIG+ A+ + +V DI+ + + + G
Sbjct: 2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT 59
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 52.6 bits (127), Expect = 5e-09
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L + L+TGAG+GIGR ++ + T+ D+D ET ++L G K
Sbjct: 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK 57
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 51.8 bits (125), Expect = 8e-09
Identities = 16/62 (25%), Positives = 23/62 (37%)
Query: 90 TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L S + + L+TGAG+GIGR A VT+ E + G
Sbjct: 17 NLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG 76
Query: 150 YK 151
+
Sbjct: 77 GQ 78
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 51.3 bits (124), Expect = 1e-08
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+G+ ++TGAG GIG+E+A F ++V DI+ N +++ G +
Sbjct: 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 51.5 bits (124), Expect = 1e-08
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+ G++ L+TGA GIGR A+ + + D + + + K L EQ
Sbjct: 3 HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF 55
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 51.4 bits (124), Expect = 1e-08
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L + ++TGA GIGR +A F + ++V D+ +G + + G K
Sbjct: 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 51.0 bits (123), Expect = 2e-08
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL+G++ +TG+ GIG +A+ + Q + W + + + + + G
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH 84
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 51.0 bits (123), Expect = 2e-08
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
++ ++TG+ NGIGR A F + + + ET+Q + G +
Sbjct: 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQN 59
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 90 TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEE 147
+ S L+ ++ ++TG GIG AK FV++ KV V DI + + +
Sbjct: 5 STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKV--VIADIADDHGQKVCNNIGS 62
Query: 148 QG 149
Sbjct: 63 PD 64
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 50.6 bits (122), Expect = 2e-08
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+G++I+LT A GIG+ A F + ++ DI+E E ++ Q
Sbjct: 2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV 56
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 50.6 bits (122), Expect = 2e-08
Identities = 10/54 (18%), Positives = 30/54 (55%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+++ +++++TG +G+G+ +A +F + +V ++ E K +E+ +
Sbjct: 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ 56
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 50.3 bits (121), Expect = 3e-08
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
G+ +++TG+ NGIGR A F + + +E ETKQ + + G
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 49.9 bits (120), Expect = 4e-08
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
L G ++TG GIG +A+ + T+ D+D LE G+
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF 61
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 49.8 bits (120), Expect = 4e-08
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 93 PPSEKSLEGEIILLTGA-GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+G+++L+T A G GIG A++ + +V D E+ ET+ L + G
Sbjct: 14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG 73
Query: 152 NIHTYK 157
+
Sbjct: 74 RVEAVV 79
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 49.5 bits (119), Expect = 5e-08
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L G+ L+TGA GIG+++A + + + + G K
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK 82
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 49.5 bits (119), Expect = 6e-08
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
P S L+G +++TG GIGR +A F + + + L++ G
Sbjct: 2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61
Query: 153 IHTYK 157
+ +
Sbjct: 62 VIGVQ 66
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 49.2 bits (118), Expect = 7e-08
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
+ L+G+ +++TGA GIGRE+A + +V ++ + E G + H
Sbjct: 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 49.1 bits (118), Expect = 7e-08
Identities = 9/53 (16%), Positives = 25/53 (47%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L ++++++G G +G LA++ + LV + + + + + G +
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 49.1 bits (118), Expect = 8e-08
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
++ ++TG +GIG + V++ +V +DEK +
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV 54
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 49.2 bits (118), Expect = 8e-08
Identities = 12/62 (19%), Positives = 22/62 (35%)
Query: 90 TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L+P + +TG +GIG +A+ + + D K + L G
Sbjct: 13 GLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG 72
Query: 150 YK 151
+
Sbjct: 73 HD 74
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 49.1 bits (118), Expect = 8e-08
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
S + L+TG G+GIG+ +A V +++ + Q LE G
Sbjct: 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG 59
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 49.2 bits (117), Expect = 9e-08
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
+ ++TG GIG E+ KQ + + +V D +E + L+ ++N+
Sbjct: 5 CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENV 64
Query: 154 HTYK 157
++
Sbjct: 65 VFHQ 68
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 48.7 bits (117), Expect = 9e-08
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+ + +L+TGA +GIGR + F + LV DI+E E + +
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV 55
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 48.6 bits (117), Expect = 1e-07
Identities = 10/51 (19%), Positives = 23/51 (45%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L+G++ ++TG GIG +A +FV+ ++ + + +
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD 54
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 48.8 bits (117), Expect = 1e-07
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ + E+ L+TGA +GIG E+A++ + + + E+G T + L E G +
Sbjct: 18 ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE 72
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 48.4 bits (116), Expect = 2e-07
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 90 TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+++ + S EG I L+TG G G+GR +A+ ++V + + +
Sbjct: 22 SMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT 81
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 48.0 bits (115), Expect = 2e-07
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
E ++ L+TGAG GIGRE+AK + ++C +K + ++ GY+
Sbjct: 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 94
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
K+L+ ++ ++TGA GIGR +A + + ++ E G ++ G +
Sbjct: 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE 78
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
L + ++TG G+GIGR A+ F ++ +V D++E
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV 67
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 47.5 bits (114), Expect = 2e-07
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
SLEG++ L+TGAG+G G +AK+F + +V D D+ G
Sbjct: 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV 49
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 47.6 bits (114), Expect = 2e-07
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
L +++++TGA GIGR +A++FV ++ I + G
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG 44
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL+G L+TG GIG + ++ + +EK +E ++ E+G
Sbjct: 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 47.6 bits (114), Expect = 3e-07
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL+G+I L+TGA GIG +A + + T+V DI+++ + + G
Sbjct: 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN 84
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
LE ++ ++TGA GIG E ++ + +V D+ E + G
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASVG 56
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 47.2 bits (113), Expect = 3e-07
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
L G++ ++TGAG GIG +A++ ++C DID +
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA 69
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 47.2 bits (113), Expect = 4e-07
Identities = 14/61 (22%), Positives = 23/61 (37%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
L +L+TG GIGR +A F + + + + L E G N+
Sbjct: 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96
Query: 157 K 157
+
Sbjct: 97 R 97
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 46.7 bits (112), Expect = 4e-07
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ L+ ++ ++TG NGIGR +A++F + D+ E + + G +
Sbjct: 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRR 55
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 46.3 bits (111), Expect = 6e-07
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
G+ +L+TG GIGR +A+ F + + D+ +G
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG 42
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 46.3 bits (111), Expect = 6e-07
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL ++ L+TGA GIG E+A T+V + + + ++E+G+K
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK 55
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 46.4 bits (111), Expect = 6e-07
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
G+++++TG G GIG + + FV +V D DE G +Q L
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 55
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 46.3 bits (111), Expect = 7e-07
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL+ + +L+TG GIG + ++F + +E NE +++G++
Sbjct: 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 46.4 bits (111), Expect = 7e-07
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
SL G++ ++TGA GIG +A++ +V D + ++ + G
Sbjct: 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG 77
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 46.3 bits (111), Expect = 8e-07
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
K LE ++ L+T + +GIG +A++ Q +V ++ + T L+ +G
Sbjct: 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS 64
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 45.9 bits (110), Expect = 8e-07
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET-KQMLEEQGYK 151
+ ++TGA +G G +A +F+ + D+ + ET + K
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK 53
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 46.0 bits (110), Expect = 9e-07
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
S + I++TG GIG + + T+++ +E G K
Sbjct: 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 65
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 46.0 bits (110), Expect = 9e-07
Identities = 8/52 (15%), Positives = 20/52 (38%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L + ++TG +GIG + ++ + D + + L ++
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF 56
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
L G+ +++TG G+G E A+Q V +V D+ ++ T
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT 45
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 46.0 bits (110), Expect = 1e-06
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
L G++ L++G G+G + V +V DI ++
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 45.7 bits (109), Expect = 1e-06
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L GE+ L+TG +G+GR L +FV + D + +++ G
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE---RLRELEVAHG 50
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 45.4 bits (108), Expect = 1e-06
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+ + + GAG+ IG E+AK+F T+ + + +E G
Sbjct: 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG 55
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+LEG L+TG GIG + ++ ++ ++K N+ +G+K
Sbjct: 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK 59
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 45.0 bits (107), Expect = 2e-06
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
S + IL+ G +G E+ K F + D E N +
Sbjct: 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD 61
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L G+ L+TG+ G+G A+ ++ DI E+ L +GY
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD 59
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 44.8 bits (107), Expect = 2e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L G+ IL+TGA +GIGR F + +LV D +E+ E LE +
Sbjct: 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA 54
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 44.8 bits (107), Expect = 2e-06
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+TGAG GIG+ +A + V+ + D ++ + + G
Sbjct: 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH 52
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 44.4 bits (106), Expect = 3e-06
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNET 141
L+G++ L+TG +G+G E+ K + KV DI+E +
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKV--AFSDINEAAGQQL 46
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 44.0 bits (105), Expect = 4e-06
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ L G+ L+TGA GIG+ +A + T++ DI+ +G K G K
Sbjct: 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASIGKK 53
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 44.2 bits (105), Expect = 4e-06
Identities = 8/60 (13%), Positives = 21/60 (35%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
L + ++ A GIG + +++ V+ + + ++ NI +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 44.0 bits (105), Expect = 5e-06
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
K LEG+++++TG+ G+G+ +A +F KV +V + E N + +++ G +
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKV-VVNYRSKEDEANSVLEEIKKVGGE 58
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 43.7 bits (104), Expect = 5e-06
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
L+G+ +L+TG+ GIG A+ F + + +ET + G
Sbjct: 3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD 58
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 43.4 bits (103), Expect = 7e-06
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
L+G++ ++TG GIG+ + K+ ++ +V + L+
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT 69
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 43.3 bits (103), Expect = 8e-06
Identities = 6/55 (10%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
L+T G+G+++ ++ + ++ D K+ ++ +
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER 58
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 43.3 bits (103), Expect = 8e-06
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+L+G+ L+TG+ +GIG +A+ + +V + + G K
Sbjct: 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK 52
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 43.4 bits (103), Expect = 8e-06
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
L ++ +TG G+GIG +A+ F++H V + +++ G +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR 78
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 42.9 bits (102), Expect = 1e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
EG++ L+TGA GIG + + D G
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG 64
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 42.9 bits (102), Expect = 1e-05
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
K LEG+ L+TG+ GIGR A+ +V+ T+ DID + +
Sbjct: 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA 48
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
+++TG G+GIG+++ F++ + DIDEK + + +
Sbjct: 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN 48
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 41.7 bits (99), Expect = 3e-05
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L G+ L+TGA +GIG +A+ + ++ +E+ L++
Sbjct: 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY 62
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 41.7 bits (99), Expect = 3e-05
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
E L+G++ L+TG+ GIGR +A++ T++ E+ +++ + G K
Sbjct: 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK 58
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 41.5 bits (98), Expect = 3e-05
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
+I ++TGAG+G+GR +A + ET
Sbjct: 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET 68
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 41.7 bits (99), Expect = 3e-05
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
L+G+ ++TG+ G+G+ +A + +V + T + + G
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN 56
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 41.9 bits (99), Expect = 3e-05
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+K L+G++ ++TGA GIG +A+ F + T+V D+D + K++ ++ G
Sbjct: 208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG 260
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 41.4 bits (98), Expect = 3e-05
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNET 141
S L+TG GIG+ + + +Q+ ++ DI + + E
Sbjct: 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHT-VINIDIQQSFSAEN 45
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 41.5 bits (98), Expect = 4e-05
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+S+ + ++TG+ +GIG +A+ + + L + ++ T ++
Sbjct: 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT 77
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 41.4 bits (98), Expect = 4e-05
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
SL G I L+TG GIG+ +A+ ++ + D + +T L G
Sbjct: 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG 77
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 41.4 bits (98), Expect = 4e-05
Identities = 8/52 (15%), Positives = 18/52 (34%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+ + ++TGA GIG +A +V ++ + +
Sbjct: 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN 55
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 41.0 bits (97), Expect = 4e-05
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
P S L G L+TGA GIG +A+ F + E E L + +
Sbjct: 19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF 76
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 41.0 bits (97), Expect = 4e-05
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
SL G ++TGAG+GIGR +A + + ++ W + E + + G
Sbjct: 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS 80
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 40.9 bits (97), Expect = 4e-05
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
L G +L+TGAG GIGR + +V + + +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 41.1 bits (97), Expect = 4e-05
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+ G++ ++TGA GIGR +A Q + T+ Q + G
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG 53
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 41.0 bits (97), Expect = 5e-05
Identities = 11/60 (18%), Positives = 22/60 (36%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
S +G++ +TG G G+G+ + V T + + Q +H +
Sbjct: 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 40.9 bits (97), Expect = 5e-05
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+LEG++ L+TGA GIG+ +A+ + ++ E G L + G
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 57
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 40.8 bits (96), Expect = 5e-05
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQ-----HKVTLVCWDIDEKGNNETKQMLEEQG 149
L + +LTGA G GR LA Q + + + E + K+ L Q
Sbjct: 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVS--ARSESMLRQLKEELGAQQ 57
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 41.0 bits (97), Expect = 6e-05
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
S + L+ L+TG +GIGR A + + V + +E+ + K ++EE G K
Sbjct: 43 GSGR-LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 40.8 bits (96), Expect = 7e-05
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
II+++G GIG K +V DI +
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 40.6 bits (96), Expect = 7e-05
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L+G+ L+TGA GIG ++A+ F LV D + ++ L EQ
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF 68
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 40.3 bits (95), Expect = 8e-05
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+G++ ++TG+ +GIG +A + L + + + + G K
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK 56
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 40.4 bits (95), Expect = 8e-05
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQF 121
P S ++G ++++TGAG GIGR A F
Sbjct: 19 PGSMGVVDGRVVIVTGAGGGIGRAHALAF 47
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
+ L +I ++TGA +GIG AK+FV + + + +
Sbjct: 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 40.2 bits (95), Expect = 9e-05
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
+ +++++TGA GIG L + + +V K
Sbjct: 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 39.9 bits (94), Expect = 1e-04
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 12/63 (19%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
L G++ +TGA G GR A + ++ D+ ++ + T +++E
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 147 EQG 149
+ G
Sbjct: 71 DIG 73
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 101 GEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
++ ++TG GIGR ++++ + + E+ ET +++E K
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK 54
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 39.9 bits (94), Expect = 1e-04
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 12/63 (19%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
+EG++ +TGA G GR A + ++ D+ ++ + ET + +E
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 147 EQG 149
G
Sbjct: 86 ALG 88
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 39.9 bits (94), Expect = 1e-04
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYK 151
+ L I L+TGA GIGR +A + V + +E + G +
Sbjct: 22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE 79
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 40.1 bits (94), Expect = 1e-04
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQF 121
S + +++++TGAG G+G+ + +F
Sbjct: 2 SPVDFKDKVVIITGAGGGLGKYYSLEF 28
Score = 30.1 bits (68), Expect = 0.28
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQH 124
SL+ +++L+TGAG G+G+E AK F ++
Sbjct: 314 GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKY 345
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
G+ + +TGAG GIG A FV+ + +D
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ 43
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 39.5 bits (93), Expect = 1e-04
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 16/67 (23%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN----------------NETK 142
+EG++ +TGA G GR A + Q ++ DI + ET
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 143 QMLEEQG 149
+++
Sbjct: 69 DLVKGHN 75
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 39.5 bits (93), Expect = 2e-04
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
++ +++L+TG G GR A + + ++ +DI E +E
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 147 EQG 149
+ G
Sbjct: 68 KTG 70
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 39.5 bits (93), Expect = 2e-04
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-------------DEKGNNETKQM 144
SL+G + +TGA G GR A + ++ DI + +ET ++
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 145 LEEQGYK 151
+E+QG K
Sbjct: 72 VEDQGRK 78
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/50 (24%), Positives = 17/50 (34%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
+ G L+TGAG GIGR+ K +V +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG 53
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 39.6 bits (93), Expect = 2e-04
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQG 149
P +E ++TGA IGR +A + Q +V ++ + + L ++
Sbjct: 16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRV-VIHYHNSAEAAVSLADELNKER 72
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 39.4 bits (93), Expect = 2e-04
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
L+G++ L+TGA GIGR +A + +V +E+ NE +++ G
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD 55
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
+ ++TG GIG +A+ + I D +G L G +
Sbjct: 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR 80
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDID--EKGNNETKQMLEEQGYK 151
SL+G+++++TGA G+G E A+ + + + K++ + G K
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK 74
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYK 151
+ L+TGA GIGR +A Q + V + ++ + ++ +G
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD 55
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 38.9 bits (91), Expect = 2e-04
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQF 121
S +G ++L+TGAG G+GR A F
Sbjct: 3 SPLRFDGRVVLVTGAGGGLGRAYALAF 29
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
L G + L+TG G+G +A+ + ++V + E+ + +++ E+ G +
Sbjct: 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 39.4 bits (92), Expect = 3e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQH 124
+ +G + ++TGAG G+GRE A F +
Sbjct: 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAER 42
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 39.0 bits (92), Expect = 3e-04
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ I +TG GIG + ++ + +V + + + + + G+
Sbjct: 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLEDQKALGFD 64
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 38.6 bits (91), Expect = 3e-04
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L+G +TGAG+GIG E+ + F L+ D + + Q L
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV 59
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 38.8 bits (91), Expect = 3e-04
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
S E +L+ G +G + F + D+ E
Sbjct: 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE 41
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 38.7 bits (91), Expect = 3e-04
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 13/64 (20%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN-------------ETKQML 145
LEG + +TGA G GR A + ++ DI K + ET +++
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 146 EEQG 149
E
Sbjct: 69 EAAN 72
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLV 129
+ I++TGAG+G+GR L V+ H+V+++
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMM 33
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 38.0 bits (89), Expect = 5e-04
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
EG +++G G+G ++ + +V D+
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ + L+TG+ G+G+ A + ++ + ++ + +K ET + +E+ G K
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNI-VINYARSKKAALETAEEIEKLGVK 55
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 38.0 bits (89), Expect = 5e-04
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
L+ + ++TGA +G+G + + Q T++ D+ E L
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL 51
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 38.0 bits (89), Expect = 6e-04
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
S++G + ++TG +G+G A++ V + V D+ G + L
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 56
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 38.0 bits (89), Expect = 6e-04
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 13/73 (17%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQM 144
L+G++ +TGA G GR A + Q +V D+ + N ET ++
Sbjct: 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 145 LEEQGYKNIHTYK 157
+EEQG + I +
Sbjct: 102 VEEQGRR-IIARQ 113
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 37.6 bits (88), Expect = 7e-04
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 103 IILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDE 135
+I +TG+ +GIG L + + H V + D +
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTV--IGIDRGQ 35
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 37.1 bits (87), Expect = 0.001
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLV 129
+L+TGA G+G A+ H + L
Sbjct: 3 VLITGATGGLGGAFARALKGHDLLLS 28
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 37.1 bits (87), Expect = 0.001
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
SEK L+G+ +L+TG +GIGR ++ F + + + D + NETKQ +E++G K
Sbjct: 41 GSEK-LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDA-NETKQYVEKEGVK 98
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLV-CWDIDEKGNNETKQMLEEQGYKNIHTYK 157
L+TGA GIGR +A + + L + + + E + +G +
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLG 58
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 37.1 bits (87), Expect = 0.001
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------E 140
P S EG+ L+TG G+GR A + + D E + E
Sbjct: 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAE 61
Query: 141 TKQMLEEQGYKNIHTYK 157
T ++E+ G + + K
Sbjct: 62 TVALVEKTGRR-CISAK 77
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
++T + G A + + T+ C D K +E + E
Sbjct: 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET 47
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 36.7 bits (86), Expect = 0.001
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV---CWDIDEKGNNETKQMLEEQG 149
L+ ++I++ G +G AK F V LV D N+ K LE+QG
Sbjct: 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG 62
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 36.8 bits (86), Expect = 0.001
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136
+ + ++TG +G+G K+ + +V DI +
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE 44
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQFVQH 124
+S +L+TG GIG +A+ F
Sbjct: 15 VPRSHMSRSVLVTGGNRGIGLAIARAFADA 44
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 36.7 bits (86), Expect = 0.001
Identities = 6/52 (11%), Positives = 22/52 (42%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
++G++ ++T +G+G A + ++ L+ + + + +
Sbjct: 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV 55
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 36.7 bits (86), Expect = 0.002
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQH 124
++ +L+TG GIG +A++
Sbjct: 7 EGAKPPFVSRSVLVTGGNRGIGLAIAQRLAAD 38
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
+ G++ ++TG+ +GIG +A+ F + +V +E + L+E+
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF 55
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 36.4 bits (85), Expect = 0.002
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQG 149
+ I++ GAG IGR A +F Q V ++ ++ +G +E+ G
Sbjct: 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANV-VLTYNGAAEGAATAVAEIEKLG 57
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 36.4 bits (85), Expect = 0.002
Identities = 5/28 (17%), Positives = 15/28 (53%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH 124
+ +G+ ++ G +G+G ++ V+
Sbjct: 4 GNYQGKKAIVIGGTHGMGLATVRRLVEG 31
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 36.3 bits (84), Expect = 0.002
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-------NETKQMLE 146
P+ L G + +TGA GIG+ +A + + +V + + + +E
Sbjct: 38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97
Query: 147 EQGYK 151
G K
Sbjct: 98 AVGGK 102
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 36.0 bits (84), Expect = 0.002
Identities = 6/55 (10%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
+ +TG G+G ++++ V + + ++ + + G
Sbjct: 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHV-STWLMHERDAGRD 76
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 36.1 bits (84), Expect = 0.002
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
+ + L+TGA GIG +A+ VQ + +V
Sbjct: 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVV 60
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 35.7 bits (83), Expect = 0.003
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQF 121
S ++ E ++TG IG +A +
Sbjct: 3 ETSHEASECPAAVITGGARRIGHSIAVRL 31
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 35.7 bits (83), Expect = 0.003
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQF 121
P SL G+ + ++G GIG +AK+
Sbjct: 2 PGSMSLRGKTMFISGGSRGIGLAIAKRV 29
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 35.8 bits (83), Expect = 0.003
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQ---HKVTLVCWDIDEKGNNETKQMLEEQG 149
S + L+TG GIG + + + V L D+ +G Q L+ +G
Sbjct: 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV-TRG-QAAVQQLQAEG 53
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 35.7 bits (83), Expect = 0.003
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
S + +TGA +G G A++F + +LV
Sbjct: 13 LVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLV 49
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 35.7 bits (83), Expect = 0.004
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-------NETKQMLEEQG 149
+L G+ + +TGA GIG +A + + + N + + G
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG 61
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 35.6 bits (83), Expect = 0.004
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
L+G+ L+TG+ GIG+ +A V ++ E+ NET + + Q
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY 58
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 35.7 bits (83), Expect = 0.004
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGN 138
S +++TGA +G+G A++ + V + D KG
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDT-RKGE 54
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 35.3 bits (82), Expect = 0.004
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139
L+TG +G+GR A +V D+ +G +
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRREGED 40
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 35.4 bits (82), Expect = 0.004
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE 135
+ + L+ G IG+ + K+ + L DI E
Sbjct: 30 QSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISE 70
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 35.2 bits (82), Expect = 0.005
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQ-HKVTLV 129
SL+ +I ++TGA G+G E+ K + H V +
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL 34
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 34.8 bits (81), Expect = 0.005
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 103 IILLTGAGNGIGRELAKQFVQ--HKVTLV 129
+I++TGA +G+G ELAK + L
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLT 31
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 34.8 bits (81), Expect = 0.005
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
E ++ ++TGA GIG +A+ + L
Sbjct: 1 EMKVAVITGASRGIGEAIARALARDGYALA 30
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
+L+G++ L+TGA +GIG A+ +
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAEGAAVA 35
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 34.9 bits (81), Expect = 0.006
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
+ +++++TGA +GIG +A++F + L+
Sbjct: 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLL 44
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 35.1 bits (81), Expect = 0.006
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 103 IILLTGAGNGIGRELAKQFVQ--HKV 126
IIL+TGA +G GR A+ H+V
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHRV 32
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 34.9 bits (81), Expect = 0.006
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQF 121
P SLEG++ L+TGAG GIGRE+A +
Sbjct: 22 PQSASLEGKVALVTGAGRGIGREMAMEL 49
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 35.0 bits (81), Expect = 0.006
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH 124
+ L + +L+TGA GIG+ A ++++
Sbjct: 29 ERLAKKTVLITGASAGIGKATALEYLEA 56
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 34.9 bits (81), Expect = 0.007
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQH 124
+L IL+TGA +G A + ++H
Sbjct: 24 TLSSAPILITGASQRVGLHCALRLLEH 50
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 34.6 bits (80), Expect = 0.007
Identities = 5/37 (13%), Positives = 17/37 (45%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
+ +++ G +G + + F ++ T++ D+
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 34.5 bits (80), Expect = 0.007
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQF 121
+ K L G++ L TGAG GIGR +A +
Sbjct: 14 DASKPLAGKVALTTGAGRGIGRGIAIEL 41
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 34.5 bits (80), Expect = 0.008
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
+ ++IL+TGA GIG +A++ ++
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKIL 32
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 34.5 bits (80), Expect = 0.008
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 96 EKSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQG 149
+ + ++L+TG GIG + + + +V V + + + + + E G
Sbjct: 21 QSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRV-GVNYAANREAADAVVAAITESG 75
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 34.3 bits (79), Expect = 0.011
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH 124
+ + L+TGA +GR +A+
Sbjct: 42 TAPTVPVALVTGAAKRLGRSIAEGLHAE 69
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 34.3 bits (79), Expect = 0.011
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Query: 104 ILLTGAGNGIGRELAKQFVQ-----HKVTLVC 130
IL+TG G+G L K + + C
Sbjct: 24 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTC 55
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 34.2 bits (79), Expect = 0.011
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQH 124
+ + L+TGA +GR +A+
Sbjct: 5 TAPTVPVALVTGAAKRLGRSIAEGLHAE 32
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 34.2 bits (79), Expect = 0.011
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 101 GEIILLTGAGNGIGRELAKQFVQ--HKVTLV 129
G++IL+TG GIG+ + +
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVY 32
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 34.0 bits (79), Expect = 0.012
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQG 149
L+T A + G + Q T+VC D + E G
Sbjct: 5 LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG 50
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 33.7 bits (78), Expect = 0.014
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 103 IILLTGAGNGIGRELAKQFVQH-------KVTLVCWDIDEKGNNETKQMLEEQG 149
I+L+TGAG GIGR +A +F + + LV + +G
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG 57
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 33.6 bits (78), Expect = 0.017
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYK 151
++++TGA GIG+ +A + LV + K E + +E G +
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ 52
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 33.5 bits (77), Expect = 0.017
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 103 IILLTGAGNGIGRELAKQFVQ 123
+++TGA GIG L +Q V+
Sbjct: 5 SVVVTGANRGIGLGLVQQLVK 25
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 33.7 bits (77), Expect = 0.017
Identities = 5/52 (9%), Positives = 15/52 (28%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
S++G+ ++ +G A +V + ++
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF 167
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural
genomics, pyrococcus PSI-2, protein structure
initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm
3638}
Length = 373
Score = 33.5 bits (76), Expect = 0.019
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
LE + I + G + L + ++ ++ DIDE+ ++ E GY++I +
Sbjct: 171 LENKDIFVLGDDDLTSIALMLSGLPKRIAVL--DIDERLTKFIEKAANEIGYEDIEIFT 227
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.9 bits (77), Expect = 0.021
Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 53/138 (38%)
Query: 28 LTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSAL-ES 86
LTL S SLE +++ PT S F S L E
Sbjct: 9 LTL---SHGSLEHVLLV-PTASFFI----------------------------ASQLQEQ 36
Query: 87 ILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE 146
L P+E + T A EL +F+ + +LV + + Q+L
Sbjct: 37 FNKILPEPTE-GFAADDEPTTPA------ELVGKFLGYVSSLV----EPSKVGQFDQVLN 85
Query: 147 ------EQGY---KNIHT 155
E Y +IH
Sbjct: 86 LCLTEFENCYLEGNDIHA 103
Score = 30.0 bits (67), Expect = 0.39
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 34/124 (27%)
Query: 8 LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSP-TPSHFT---DFSTSWSQSMT 63
EL + LY ++ LI S ++L I + FT + W ++ +
Sbjct: 170 FEEL-----RDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNI-LEWLENPS 223
Query: 64 A-------LSIILS-ELILLIIKLLYSALESILLTL----IPPSE--KSLEGEIILLTGA 109
LSI +S LI +I L ++T P E L+G TG
Sbjct: 224 NTPDKDYLLSIPISCPLIGVI------QLAHYVVTAKLLGFTPGELRSYLKG----ATGH 273
Query: 110 GNGI 113
G+
Sbjct: 274 SQGL 277
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 33.3 bits (77), Expect = 0.021
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQF 121
++ ++TGA GIG +A +
Sbjct: 24 METNKVAIVTGASRGIGAAIAARL 47
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 33.3 bits (77), Expect = 0.022
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQF 121
+ L+G++ L+TGA GIGR +AK+
Sbjct: 1 ANSMLKGKVALVTGASRGIGRAIAKRL 27
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 33.0 bits (76), Expect = 0.026
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 104 ILLTGAGNGIGRELAKQFVQ-HKVTLV 129
ILL GA +G + ++ + +V
Sbjct: 6 ILLIGASGTLGSAVKERLEKKAEVITA 32
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 33.3 bits (76), Expect = 0.026
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 98 SLEGEIILLTGAGNG-IGRELAKQFVQ 123
+ + + +L+TGAG G IG E+ + +Q
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQ 499
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 32.9 bits (76), Expect = 0.026
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 95 SEKSLEGEIILLTGAGNGIGRELAKQF 121
+ SL G+ +TG GIG +AK+
Sbjct: 25 TSISLAGKTAFVTGGSRGIGAAIAKRL 51
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 32.9 bits (76), Expect = 0.028
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQF 121
L+G++ L+TG+G GIG +A
Sbjct: 14 GRLDGKVALVTGSGRGIGAAVAVHL 38
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 32.9 bits (76), Expect = 0.028
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLV 129
I+L+TGA G G + ++F+Q ++
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVI 28
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 32.6 bits (75), Expect = 0.036
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 103 IILLTGAGNGIGRELAKQFVQ--HKV 126
+ L+TGA +G GR +A+ V V
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTV 32
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics,
infectious diseases, bacillus anthracis STR. AMES,
rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus
anthracis}
Length = 287
Score = 32.1 bits (74), Expect = 0.047
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 104 ILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDE 135
+++TGA NG +G++L ++ + + +D
Sbjct: 8 VIITGA-NGQLGKQLQEELNPEEYDIYPFDKKL 39
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint
center for structural genomics, JCSG, protein structu
initiative; HET: NAI UNL; 2.05A {Clostridium
acetobutylicum} SCOP: c.2.1.2
Length = 292
Score = 32.1 bits (74), Expect = 0.053
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 104 ILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDE 135
IL+TGA NG +GRE+ KQ V ++ D+ +
Sbjct: 15 ILITGA-NGQLGREIQKQLKGKNVEVIPTDVQD 46
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 31.7 bits (73), Expect = 0.066
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLV 129
+L+TGA GIG A+ ++V L+
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLM 35
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 31.2 bits (71), Expect = 0.11
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 103 IILLTGAGNGIGRELAKQFVQ 123
++L+TG +GIG LA +
Sbjct: 4 VVLITGCSSGIGLHLAVRLAS 24
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 31.0 bits (71), Expect = 0.14
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
+ + +L+ A GIGR +A Q +
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVT 47
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET: NDP;
1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 30.4 bits (68), Expect = 0.20
Identities = 6/26 (23%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVT 127
I + GA G + + + H+V
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVL 28
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse,
oxidoreductase; 2.10A {Chromohalobacter salexigens}
Length = 267
Score = 30.4 bits (69), Expect = 0.20
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
+L+TGA G+G + + DI + G E
Sbjct: 5 LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE 41
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent
epimerase/dehydratase, LMR162, NESG, structural
genomics, PSI-2; 2.73A {Listeria monocytogenes}
Length = 221
Score = 29.9 bits (67), Expect = 0.27
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLV 129
I + GA G + ++ H+VT +
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAI 30
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation,
flavin reductase, diaphorase, green HAEM binding
protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2
PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Length = 206
Score = 30.0 bits (68), Expect = 0.28
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLV 129
I + GA G Q VQ ++VT++
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVL 33
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding,
oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB:
3rfv_A* 3rfx_A*
Length = 267
Score = 30.0 bits (68), Expect = 0.31
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134
+L+TGA +GR + ++ L D+
Sbjct: 6 LLVTGAAGQLGRVMRERLAPMAEILRLADLS 36
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural
genomics, SGC, structural genomics consortium; HET: SAH;
1.75A {Homo sapiens} SCOP: c.66.1.42
Length = 241
Score = 29.6 bits (66), Expect = 0.32
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 84 LESILLTLIPPSEKSLEGEIILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETK 142
L+ L + S + GAG G I + L + V +V DI E + K
Sbjct: 67 LQRFLREGPNKTGTSCALDC----GAGIGRITKRLLLPLFRE-VDMV--DITEDFLVQAK 119
Query: 143 QMLEEQGYKNIHTY 156
L E+G + + +
Sbjct: 120 TYLGEEGKRVRNYF 133
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus
halodurans}
Length = 293
Score = 29.5 bits (66), Expect = 0.39
Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 12/149 (8%)
Query: 14 LIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALS------- 66
I+ + E+ + I +E + E ++ TP+H +S + +
Sbjct: 61 AILLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVYSGISNTYLNQCMKKTNRTL 120
Query: 67 IILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKV 126
+ L E + I E ++ I ++ ++ G + + G G +G +A++F
Sbjct: 121 VKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGR-VGMSVARKFAALGA 179
Query: 127 TLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
+ + + + E G + H
Sbjct: 180 KVKVGARES----DLLARIAEMGMEPFHI 204
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 29.4 bits (66), Expect = 0.46
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 104 ILLTGAGNGIGRELAKQFVQ---HKVTLV 129
+L+ GAG I R + Q K TL
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLF 54
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 29.3 bits (66), Expect = 0.51
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVT 127
I+L GA +G L + + +VT
Sbjct: 7 IVLIGASGFVGSALLNEALNRGFEVT 32
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 29.3 bits (65), Expect = 0.53
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 105 LLTGAGNG-IGRELAKQFVQHKVTLVCWDI 133
L+ G G IG LA+ W +
Sbjct: 5 LIVGV-TGIIGNSLAEILPLADTPGGPWKV 33
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 28.8 bits (65), Expect = 0.65
Identities = 5/28 (17%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLV 129
I + G+ +G+ L K +++
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAG 30
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics,
APC7755, NADP, P protein structure initiative; HET: MSE
NAP; 2.10A {Bacillus halodurans}
Length = 236
Score = 28.9 bits (65), Expect = 0.71
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLV 129
+L+ GA + R L + H+ +
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAM 51
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm
2008} PDB: 3r14_A*
Length = 221
Score = 28.4 bits (63), Expect = 0.75
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 104 ILLTGAGNGIGRELAKQFVQ---HKVTLVC 130
I + GA I + L + +TL
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYG 37
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 28.6 bits (65), Expect = 0.76
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
L+TG GIGR +A+ V + + + E Q L
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPLP 49
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase;
2.25A {Homo sapiens} PDB: 2ydx_A
Length = 315
Score = 28.7 bits (65), Expect = 0.78
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 104 ILLTGAGNG-IGRELAKQFVQHKVTLV 129
+L+TGA G +GR + K+F Q+ V
Sbjct: 5 VLVTGA-TGLLGRAVHKEFQQNNWHAV 30
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 28.2 bits (62), Expect = 1.0
Identities = 8/68 (11%), Positives = 18/68 (26%), Gaps = 21/68 (30%)
Query: 94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM--LEEQGYK 151
+ E E I R+ ++ + + E E+ K
Sbjct: 77 ADRLTQEPESI----------RKWREEQRK--------RLQELDAASKVMEQEWREKAKK 118
Query: 152 NIHT-YKR 158
++ +R
Sbjct: 119 DLEEWNQR 126
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative
deamination mechanism, oxidoreductase; HET: PHE NAD;
1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB:
1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Length = 355
Score = 27.5 bits (62), Expect = 2.0
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
SL+G +L+ G G +G LA + L+ D D +
Sbjct: 171 GSLDGLTVLVQGLGA-VGGSLASLAAEAGAQLLVADTDTER 210
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3-
hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A
{Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Length = 317
Score = 27.3 bits (61), Expect = 2.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 103 IILLTGAGNG-IGRELAKQFVQ--HKVTLVCWDIDEKGN 138
+IL+TG +G IG EL + K ++ DI ++
Sbjct: 1 MILVTG-SSGQIGTELVPYLAEKYGKKNVIASDIVQRDT 38
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic
heterohexamer, chaperone, M binding, mitochondrion,
protein transport; 2.60A {Saccharomyces cerevisiae}
Length = 64
Score = 25.6 bits (56), Expect = 2.4
Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 113 IGRELAKQFVQ---HKVTLVCWD 132
+ E +KQ VQ H+ T +C+
Sbjct: 1 LEGENSKQKVQMSIHQFTNICFK 23
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative
quinone oxidoreductase, unknown function, PSI-2; 1.76A
{Bacillus thuringiensis}
Length = 340
Score = 27.2 bits (61), Expect = 2.7
Identities = 5/25 (20%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Query: 100 EGEIILLTGAGNGIGR---ELAKQF 121
+++L+ G+ IG +L++
Sbjct: 144 RNDVLLVNACGSAIGHLFAQLSQIL 168
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold,
structural GE joint center for structural genomics,
JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Length = 349
Score = 26.8 bits (60), Expect = 3.2
Identities = 4/25 (16%), Positives = 11/25 (44%), Gaps = 3/25 (12%)
Query: 100 EGEIILLTGAGNGIGR---ELAKQF 121
+ ++T + + + LAK+
Sbjct: 164 GEKAFVMTAGASQLCKLIIGLAKEE 188
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate
pathway, dehydrogenase, oxidoreductase; 2.00A
{Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A*
1e5q_A
Length = 450
Score = 26.8 bits (58), Expect = 3.7
Identities = 4/33 (12%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136
+L+ G+G + R + + +
Sbjct: 6 VLMLGSG-FVTRPTLDVLTDSGIKVTVACRTLE 37
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain
dehydrogenase/reductase, oxidoreductase, 2-ENOY
thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Length = 357
Score = 26.8 bits (60), Expect = 3.8
Identities = 4/25 (16%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Query: 100 EGEIILLTGAGNGIGR---ELAKQF 121
G+ ++ + +G+G+ ++A
Sbjct: 167 PGDSVIQNASNSGVGQAVIQIAAAL 191
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine,
structural genomics structure initiative, PSI; HET: SAM;
2.20A {Clostridium thermocellum atcc 27405}
Length = 197
Score = 26.4 bits (58), Expect = 4.0
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
EG+ ++ GNG V + +DI +K T + L + +
Sbjct: 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLID 74
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl
reductase, ketoacyl synthase, ketoacyl reductase; 3.1A
{Thermomyces lanuginosus} PDB: 2uvb_A*
Length = 1878
Score = 26.8 bits (59), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 89 LTLIPPSEKSLEGEIILLTGAGNG-IGRELAKQFVQ 123
L S + +G+ L+TGAG G IG E+ + +
Sbjct: 640 LEAAARSGLTFQGKHALMTGAGAGSIGAEVLQGLLS 675
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus
sphaericus} SCOP: c.2.1.7 c.58.1.1
Length = 364
Score = 26.3 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
SLEG + + G GN + + L K+ LV D+++
Sbjct: 169 DSLEGLAVSVQGLGN-VAKALCKKLNTEGAKLVVTDVNKAA 208
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium
tumefa structural genomics, PSI-2, protein structure
initiative; 1.85A {Agrobacterium tumefaciens}
Length = 342
Score = 26.6 bits (59), Expect = 4.6
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 13/45 (28%)
Query: 104 ILLTGAGNG-IGRELAKQFVQ---------HKVTLVCWDIDEKGN 138
I + G G +GR+L ++ V+ K TL+ D+ +
Sbjct: 17 IAIIG-AAGMVGRKLTQRLVKDGSLGGKPVEKFTLI--DVFQPEA 58
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis,
malonyl/palmitoyl transferase, phosphopantetheine,
transferase; HET: GVL FMN; 3.10A {Saccharomyces
cerevisiae} PDB: 2vkz_A* 3hmj_A*
Length = 1887
Score = 26.5 bits (58), Expect = 5.7
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 98 SLEGEIILLTGAGNG-IGRELAKQFVQ 123
+ + + +L+TGAG G IG E+ + +Q
Sbjct: 672 TFKDKYVLITGAGKGSIGAEVLQGLLQ 698
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold,
sugar-nucleotide-binding domain; HET: NAD; 2.00A
{Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A*
1kc3_A* 1kbz_A*
Length = 299
Score = 26.0 bits (58), Expect = 5.9
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 104 ILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDE 135
ILL G G +G EL + L+ D+
Sbjct: 3 ILLFGK-TGQVGWELQRSL-APVGNLIALDVHS 33
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2
c.2.1.1 PDB: 1iyz_A 2cf2_D
Length = 302
Score = 26.0 bits (58), Expect = 6.1
Identities = 6/25 (24%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Query: 100 EGEIILLTGAGNGIGR---ELAKQF 121
GE +L+ A +G ++A+
Sbjct: 125 PGEKVLVQAAAGALGTAAVQVARAM 149
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha,
beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus
tokodaii}
Length = 273
Score = 26.0 bits (58), Expect = 6.1
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 104 ILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNE 140
L+TGA +G +G EL++ + + ++ E
Sbjct: 3 TLITGA-SGQLGIELSRLLSERHEVIKVYNSSEIQGGY 39
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus
thermophilus} PDB: 2yz5_A 2z4g_A
Length = 267
Score = 25.4 bits (56), Expect = 8.6
Identities = 5/35 (14%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 124 HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKR 158
H+ V + E + +L G++ + +
Sbjct: 226 HRPEEVGFAFPE-----VQALLAGLGFREAYYFVE 255
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI,
M structural genomics; 1.70A {Archaeoglobus fulgidus}
Length = 141
Score = 24.9 bits (55), Expect = 8.7
Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
++ E I++ G+ G L ++ ++ D + E ++LE++G+
Sbjct: 3 ENGRYEYIVI-GSEA-AGVGLVRELTAAGKKVLAVDKSK----EKIELLEDEGF 50
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.368
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,249,632
Number of extensions: 127320
Number of successful extensions: 579
Number of sequences better than 10.0: 1
Number of HSP's gapped: 578
Number of HSP's successfully gapped: 230
Length of query: 159
Length of database: 6,701,793
Length adjustment: 86
Effective length of query: 73
Effective length of database: 4,300,587
Effective search space: 313942851
Effective search space used: 313942851
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.0 bits)