Your job contains 1 sequence.
>psy2046
MALKQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMD
IRGWRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDF
NPYNDKQAEDRCHRVGQT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2046
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032157 - symbol:Etl1 "Etl1 homologue" species:722... 438 2.1e-40 1
WB|WBGene00010845 - symbol:M03C11.8 species:6239 "Caenorh... 424 1.1e-38 1
UNIPROTKB|F1NAD2 - symbol:SMARCAD1 "Uncharacterized prote... 420 2.7e-38 1
UNIPROTKB|Q5FWR0 - symbol:smarcad1 "SWI/SNF-related matri... 418 4.9e-38 1
MGI|MGI:95453 - symbol:Smarcad1 "SWI/SNF-related, matrix-... 412 2.2e-37 1
RGD|1309640 - symbol:Smarcad1 "SWI/SNF-related, matrix-as... 412 2.3e-37 1
UNIPROTKB|E2RG62 - symbol:SMARCAD1 "Uncharacterized prote... 407 7.8e-37 1
UNIPROTKB|J9NX47 - symbol:SMARCAD1 "Uncharacterized prote... 407 7.8e-37 1
UNIPROTKB|J9PA79 - symbol:SMARCAD1 "Uncharacterized prote... 407 7.8e-37 1
UNIPROTKB|Q9H4L7 - symbol:SMARCAD1 "SWI/SNF-related matri... 407 7.8e-37 1
UNIPROTKB|E1B7X9 - symbol:SMARCAD1 "SWI/SNF-related matri... 407 7.8e-37 1
UNIPROTKB|F1RWW3 - symbol:SMARCAD1 "Uncharacterized prote... 407 7.8e-37 1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 394 1.2e-35 1
TAIR|locus:2051678 - symbol:ETL1 species:3702 "Arabidopsi... 389 3.1e-35 1
ZFIN|ZDB-GENE-091113-61 - symbol:si:dkey-76p7.6 "si:dkey-... 389 5.7e-35 1
UNIPROTKB|Q9NW36 - symbol:HELLS "cDNA FLJ10339 fis, clone... 374 1.7e-34 1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 378 6.0e-34 1
RGD|1309820 - symbol:Hells "helicase, lymphoid specific" ... 367 9.5e-34 1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 374 1.6e-33 1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 374 1.7e-33 1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 370 4.6e-33 1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 370 4.8e-33 1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 371 1.3e-32 1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 365 1.6e-32 1
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 356 3.4e-31 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 355 5.9e-31 1
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 355 6.2e-31 1
POMBASE|SPCC1235.05c - symbol:fft2 "fun thirty related pr... 352 8.9e-31 1
DICTYBASE|DDB_G0280705 - symbol:DDB_G0280705 "CHR group p... 354 1.3e-30 1
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 351 1.3e-30 1
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 354 1.8e-30 1
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 350 2.1e-30 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 349 2.3e-30 1
ZFIN|ZDB-GENE-050522-499 - symbol:smarcad1 "SWI/SNF-relat... 345 3.1e-30 1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 348 3.2e-30 1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 349 3.8e-30 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 347 4.2e-30 1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 345 6.4e-30 1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 344 8.5e-30 1
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 344 8.5e-30 1
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 344 8.6e-30 1
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 350 9.1e-30 1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 343 1.1e-29 1
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 343 1.1e-29 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 343 1.1e-29 1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer... 342 1.3e-29 1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 342 1.4e-29 1
UNIPROTKB|J9P9W7 - symbol:SRCAP "Uncharacterized protein"... 336 5.6e-29 1
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 335 8.9e-29 1
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 333 9.7e-29 1
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 330 1.5e-28 1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 336 1.5e-28 1
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 336 1.5e-28 1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 336 1.5e-28 1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 336 1.5e-28 1
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 331 1.6e-28 1
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 335 1.8e-28 1
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 329 2.3e-28 1
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 326 2.7e-28 1
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 331 3.3e-28 1
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 330 4.1e-28 1
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli... 327 4.6e-28 1
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic... 327 4.7e-28 1
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 331 4.8e-28 1
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 331 5.0e-28 1
POMBASE|SPAC25A8.01c - symbol:fft3 "fun thirty related pr... 323 6.3e-28 1
UNIPROTKB|B5MDZ7 - symbol:CHD1L "Chromodomain-helicase-DN... 319 6.4e-28 1
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 326 6.5e-28 1
WB|WBGene00010369 - symbol:chd-1 species:6239 "Caenorhabd... 325 8.2e-28 1
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re... 325 8.3e-28 1
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 328 9.6e-28 1
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 328 9.8e-28 1
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 328 9.8e-28 1
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 328 9.9e-28 1
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 328 9.9e-28 1
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 324 1.0e-27 1
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 326 1.1e-27 1
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 325 1.2e-27 1
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 323 1.2e-27 1
UNIPROTKB|Q3B7N1 - symbol:CHD1L "Chromodomain-helicase-DN... 320 1.3e-27 1
RGD|1311935 - symbol:Chd1l "chromodomain helicase DNA bin... 320 1.3e-27 1
UNIPROTKB|F1SDB8 - symbol:CHD1L "Uncharacterized protein"... 320 1.3e-27 1
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 326 1.3e-27 1
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 326 1.3e-27 1
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 326 1.3e-27 1
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 326 1.3e-27 1
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 326 1.3e-27 1
UNIPROTKB|E2QUS7 - symbol:CHD8 "Uncharacterized protein" ... 326 1.4e-27 1
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 323 1.5e-27 1
UNIPROTKB|F1NS62 - symbol:CHD1L "Uncharacterized protein"... 319 1.6e-27 1
UNIPROTKB|Q86WJ1 - symbol:CHD1L "Chromodomain-helicase-DN... 319 1.6e-27 1
MGI|MGI:1915308 - symbol:Chd1l "chromodomain helicase DNA... 319 1.6e-27 1
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 323 1.6e-27 1
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 323 1.6e-27 1
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 325 1.7e-27 1
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 320 1.7e-27 1
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 320 1.7e-27 1
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 320 1.7e-27 1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 320 1.8e-27 1
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix... 317 1.9e-27 1
WARNING: Descriptions of 430 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 438 (159.2 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 81/125 (64%), Positives = 100/125 (80%)
Query: 13 KVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
K+PD+L+ +SGK LD +LP LK GHRVL+FSQF +LDI+ Y+ IR + RLDGA
Sbjct: 642 KIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGA 701
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T V+ RQ+LI ++N D +F FLLSTKAGG+GINLTAADT +IHD+DFNPYNDKQAEDRC
Sbjct: 702 TAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRC 761
Query: 133 HRVGQ 137
HR+GQ
Sbjct: 762 HRMGQ 766
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 424 (154.3 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/128 (60%), Positives = 106/128 (82%)
Query: 10 AKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRL 69
+K+ + + L ++SGK ++LD +LP+++K G +VLIFSQF +LDIL Y++IRG+ + RL
Sbjct: 740 SKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRL 799
Query: 70 DGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
DG T V RQE+I+E+N +DLF FLLST+AGGLGINLT+A+ +IIHD+DFNPYNDKQAE
Sbjct: 800 DGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAE 859
Query: 130 DRCHRVGQ 137
DRCHR+GQ
Sbjct: 860 DRCHRMGQ 867
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 420 (152.9 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 81/137 (59%), Positives = 105/137 (76%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ + +K+ D +++SGK + L+ +L DLK+ G RV++FSQF VLDIL ++ +
Sbjct: 772 KQYSHVSDFKLDMDQILDSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFL--KH 829
Query: 64 WRH--LRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFN 121
W+H +RLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D N
Sbjct: 830 WQHRYIRLDGKTQISDRIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 889
Query: 122 PYNDKQAEDRCHRVGQT 138
PYNDKQAEDRCHRVGQT
Sbjct: 890 PYNDKQAEDRCHRVGQT 906
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 418 (152.2 bits), Expect = 4.9e-38, P = 4.9e-38
Identities = 77/129 (59%), Positives = 103/129 (79%)
Query: 10 AKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRL 69
++YK+ +L+++SGK L+++L D+KK G RV++FSQF +LDI+ ++ R++RL
Sbjct: 818 SQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRL 877
Query: 70 DGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
DG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPYNDKQAE
Sbjct: 878 DGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAE 937
Query: 130 DRCHRVGQT 138
DRCHRVGQT
Sbjct: 938 DRCHRVGQT 946
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 412 (150.1 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 81/135 (60%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ Y++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 830 KQYQHINSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 889
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 890 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 949
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 950 NDKQAEDRCHRVGQT 964
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 412 (150.1 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 81/135 (60%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ Y++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 833 KQYQHINSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 892
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 893 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 952
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 953 NDKQAEDRCHRVGQT 967
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 835 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 894
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 895 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 954
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 955 NDKQAEDRCHRVGQT 969
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 835 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 894
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 895 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 954
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 955 NDKQAEDRCHRVGQT 969
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 835 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 894
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 895 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 954
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 955 NDKQAEDRCHRVGQT 969
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 835 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 894
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 895 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 954
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 955 NDKQAEDRCHRVGQT 969
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 837 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 896
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 897 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 956
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 957 NDKQAEDRCHRVGQT 971
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 407 (148.3 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 80/135 (59%), Positives = 101/135 (74%)
Query: 4 KQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 63
KQ +++ DL+++SGK + L IL +LK+ G RV++FSQF +LDIL +
Sbjct: 838 KQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 897
Query: 64 WRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPY 123
R+LRLDG TQ+S R LIDE+N D D+F FLLSTKAGGLGINLT+A+ VI+HD+D NPY
Sbjct: 898 HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 957
Query: 124 NDKQAEDRCHRVGQT 138
NDKQAEDRCHRVGQT
Sbjct: 958 NDKQAEDRCHRVGQT 972
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 394 (143.8 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 77/138 (55%), Positives = 104/138 (75%)
Query: 3 LKQTLDCA--KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMD 60
++ LD A ++KV +DLV SGK LD +LP+LKK GH+VL+FSQ +LDIL Y
Sbjct: 577 IEYPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCY 636
Query: 61 IRGWRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDF 120
+RG++ RLDG+ S R+E + ++N D ++F FL+ST+AGGLGINLTAADTVII+D D+
Sbjct: 637 LRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDW 696
Query: 121 NPYNDKQAEDRCHRVGQT 138
NP +D QA+DRCHR+GQT
Sbjct: 697 NPQSDLQAQDRCHRIGQT 714
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 389 (142.0 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/128 (58%), Positives = 98/128 (76%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + D V+ S K + L E+LP +KK+GHRVLIFSQ+ +LDIL +D+ G + RLD
Sbjct: 576 KGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLD 635
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+TQV+ RQ ++D +N D+ +FA LLST+AGG G+NLT ADTVIIHD+DFNP D+QAED
Sbjct: 636 GSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAED 695
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 696 RCHRIGQT 703
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 389 (142.0 bits), Expect = 5.7e-35, P = 5.7e-35
Identities = 74/128 (57%), Positives = 100/128 (78%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
+Y++ D++++SGKL L ++L LK+ G RV++FSQF +LDIL ++ R+ RLD
Sbjct: 770 EYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLD 829
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+T +S R LID++N DQD+F FLLST+AGGLGINLT+A+ VI+HD+D NPYNDKQAE
Sbjct: 830 GSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEG 889
Query: 131 RCHRVGQT 138
RCHRVGQT
Sbjct: 890 RCHRVGQT 897
>UNIPROTKB|Q9NW36 [details] [associations]
symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
Length = 310
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 70/128 (54%), Positives = 96/128 (75%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LKK GH+VL+FSQ +LDIL Y +R + RLD
Sbjct: 24 EFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLD 83
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ + +N D ++F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 84 GSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 143
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 144 RCHRIGQT 151
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 378 (138.1 bits), Expect = 6.0e-34, P = 6.0e-34
Identities = 72/128 (56%), Positives = 96/128 (75%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LKK GH+VL+FSQ +LDIL Y +R + RLD
Sbjct: 570 EFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLD 629
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ I +N D D+F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 630 GSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 689
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 690 RCHRIGQT 697
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/128 (54%), Positives = 95/128 (74%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LKK H+VL+FSQ +LDIL Y +R + RLD
Sbjct: 243 EFKIDEELVTNSGKFLILDRMLPELKKRCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLD 302
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ I +N D ++F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 303 GSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 362
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 363 RCHRIGQT 370
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 374 (136.7 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 72/128 (56%), Positives = 94/128 (73%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++KV ++LV SGK LD +LP+LK GH+VL+FSQ +LDIL Y R + RLD
Sbjct: 565 EFKVDEELVTNSGKFLILDRMLPELKTRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLD 624
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ I +N D D+F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 625 GSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 684
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 685 RCHRIGQT 692
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 374 (136.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 70/128 (54%), Positives = 96/128 (75%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LKK GH+VL+FSQ +LDIL Y +R + RLD
Sbjct: 587 EFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLD 646
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ + +N D ++F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 647 GSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 706
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 707 RCHRIGQT 714
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 370 (135.3 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 70/128 (54%), Positives = 94/128 (73%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LK GH+VL+FSQ +LDIL Y R + RLD
Sbjct: 588 EFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLD 647
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ S R++ + +N D D+F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 648 GSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 707
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 708 RCHRIGQT 715
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 370 (135.3 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 71/127 (55%), Positives = 94/127 (74%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+K+ + LV SGK LD +LP+LKK GH+VLIFSQ +LDIL Y +RG+ + RLDG
Sbjct: 604 FKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDG 663
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R E + +++ D ++F FLLST+AGGLGINLT+ADTVII D D+NP D QA+DR
Sbjct: 664 SMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDR 723
Query: 132 CHRVGQT 138
CHR+GQT
Sbjct: 724 CHRIGQT 730
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 371 (135.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 70/126 (55%), Positives = 94/126 (74%)
Query: 15 PDD--LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
PD L + GKL++LD++L DLK GHR LIF+Q +LD+L +++I G R+LRLDG
Sbjct: 1363 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGT 1422
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T+V RQ L D +N D + AF+LS+++GGLGINLT ADTVI +D+D+NP DKQ +DRC
Sbjct: 1423 TKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRC 1482
Query: 133 HRVGQT 138
HR+GQT
Sbjct: 1483 HRIGQT 1488
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 365 (133.5 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 69/128 (53%), Positives = 94/128 (73%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++K+ ++LV SGK LD +LP+LK GH+VL+FSQ +LDIL Y R + RLD
Sbjct: 587 EFKIDEELVTNSGKFLILDRMLPELKIRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLD 646
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+ + R++ + +N D D+F FL+ST+AGGLGINLTAADTVII+D D+NP +D QA+D
Sbjct: 647 GSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQD 706
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 707 RCHRIGQT 714
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 356 (130.4 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 71/126 (56%), Positives = 91/126 (72%)
Query: 15 PDD--LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
PD L + GKL+ LD +L DL NGHRVLIF+Q VLDIL +++I G R+LRLDGA
Sbjct: 981 PDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGA 1040
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T++ RQ L + +N D + F+LST++GGLGINLT ADTVI +D D+NP D QA+DR
Sbjct: 1041 TKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRS 1100
Query: 133 HRVGQT 138
HR+GQT
Sbjct: 1101 HRIGQT 1106
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 355 (130.0 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 71/140 (50%), Positives = 100/140 (71%)
Query: 1 MALKQTLDCAKYKVPD--DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHY 58
MAL+Q + ++PD L+ +SGKL LD +L LK GHRVLI+SQ ++D+L Y
Sbjct: 1108 MALQQRHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEY 1167
Query: 59 MDIRGWRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDV 118
M R ++RLDG++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D
Sbjct: 1168 MVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDS 1227
Query: 119 DFNPYNDKQAEDRCHRVGQT 138
D+NP D+QA DR HR+GQT
Sbjct: 1228 DWNPTVDQQAMDRAHRLGQT 1247
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 355 (130.0 bits), Expect = 6.2e-31, P = 6.2e-31
Identities = 67/125 (53%), Positives = 93/125 (74%)
Query: 15 PDDLVVE--SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
PD +++ GKL+KL +L +L GHR LIF+Q VLDIL +++I G+R++RLDGA
Sbjct: 1356 PDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1415
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T++ RQ L +++NRD + F+LST++GGLGINLT ADTVI +D D+NP DKQ +DRC
Sbjct: 1416 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRC 1475
Query: 133 HRVGQ 137
HR+GQ
Sbjct: 1476 HRIGQ 1480
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 352 (129.0 bits), Expect = 8.9e-31, P = 8.9e-31
Identities = 65/126 (51%), Positives = 95/126 (75%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + DD ++SGK++ L E+LP +K+ G R+L+FSQF +LDIL +D ++RLDG
Sbjct: 913 YTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDG 972
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+TQV RQ++ID++++++D+ FLLSTKAGG GINL A+ VI++D +NP++D QAEDR
Sbjct: 973 STQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAEDR 1032
Query: 132 CHRVGQ 137
HRVGQ
Sbjct: 1033 AHRVGQ 1038
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 354 (129.7 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 70/128 (54%), Positives = 92/128 (71%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K ++ L+ SGKL +D++LP LK H+VLIFSQ + VLDIL Y+ RG+ H R+D
Sbjct: 821 KDQIFQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERID 880
Query: 71 GATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + + RQ ID +++ D D F FLL T+AGG+GINLTAADTVII D D+NP ND QA+
Sbjct: 881 GSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQ 940
Query: 130 DRCHRVGQ 137
RCHR+GQ
Sbjct: 941 ARCHRIGQ 948
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 351 (128.6 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 64/133 (48%), Positives = 96/133 (72%)
Query: 8 DCAKYKVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWR 65
D + ++P D + ESGKL KLDE+L DLK+ GHR+LI+ Q ++ I Y+ + ++
Sbjct: 1219 DYSNIRMPSMDRFIAESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYK 1278
Query: 66 HLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYND 125
++RLDG+T + SR+E++ + + ++F F+LST+AGGLG+NLT+ADTVI +D D+NP D
Sbjct: 1279 YIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTID 1338
Query: 126 KQAEDRCHRVGQT 138
QA DR HR+GQT
Sbjct: 1339 SQAMDRAHRIGQT 1351
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 354 (129.7 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 67/128 (52%), Positives = 95/128 (74%)
Query: 13 KVPDDLVVE--SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K PD +++ GKL+ +D +L LK NGHRVLIF+Q +LD+L +++ G +LRLD
Sbjct: 1646 KFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLD 1705
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G+T+V RQ L++ +N D+ +F F+LST++GG+GINLT ADTVI +D D+NP D QA+D
Sbjct: 1706 GSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQD 1765
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 1766 RCHRIGQT 1773
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 350 (128.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/127 (54%), Positives = 96/127 (75%)
Query: 14 VPDD--LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
VPD L+ ++GKL LD +L LK NGHRVLI+SQ ++D+L YM R R++RLDG
Sbjct: 1145 VPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDG 1204
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
++++S+R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA DR
Sbjct: 1205 SSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1264
Query: 132 CHRVGQT 138
HR+GQT
Sbjct: 1265 AHRLGQT 1271
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 349 (127.9 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/123 (52%), Positives = 91/123 (73%)
Query: 16 DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
D + ES KL+KLDE+L LK GHRVLI+ Q ++D++ Y+ R + H+RLDG++++
Sbjct: 1292 DRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKL 1351
Query: 76 SSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R++L+ ++ + ++F FLLST+AGGLGINLTAADTVI +D D+NP D QA DR HR+
Sbjct: 1352 EDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRL 1411
Query: 136 GQT 138
GQT
Sbjct: 1412 GQT 1414
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 345 (126.5 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 65/127 (51%), Positives = 95/127 (74%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ L+++SGK L + L LK+ G RV++FSQF +LDI+ + +++RLDG
Sbjct: 790 FQLEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDG 849
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+T ++ R LID+YN + ++F FLLST+AGG GINL +A+TVI+HD+D NP+NDKQAEDR
Sbjct: 850 STPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDR 909
Query: 132 CHRVGQT 138
CHR+GQT
Sbjct: 910 CHRMGQT 916
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 348 (127.6 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 67/128 (52%), Positives = 94/128 (73%)
Query: 13 KVPD--DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++PD L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1097 RIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1156
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1157 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1216
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1217 RAHRLGQT 1224
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 349 (127.9 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 64/118 (54%), Positives = 95/118 (80%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+SGKL+ LD++L DLK GHRVLI+SQF +++IL +M R +++LRLDG++++ R++
Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
++D++ D +FAFLLST+A G+GINLT+ADTVI +D D+NP D+QA+DR HR+GQT
Sbjct: 1825 MVDDFQSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQT 1882
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 347 (127.2 bits), Expect = 4.2e-30, P = 4.2e-30
Identities = 65/127 (51%), Positives = 95/127 (74%)
Query: 13 KVPDDL--VVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P L + +SGKL KLD++L +LK N HRVLI+ Q ++D++ Y+ R +++LRLD
Sbjct: 1417 RIPSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLD 1476
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ E+ +LF FLLST+AGGLGINLTAADTVI +D D+NP D QA D
Sbjct: 1477 GSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMD 1536
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 1537 RAHRIGQ 1543
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 345 (126.5 bits), Expect = 6.4e-30, P = 6.4e-30
Identities = 66/126 (52%), Positives = 90/126 (71%)
Query: 15 PDD--LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
PD L + GKL+KL +L LK NGHR LIF+Q VLD+L +++ G+ ++RLDGA
Sbjct: 1236 PDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGA 1295
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T++ RQ L + +N D + F+LS+++GGLGINLT ADTVI +D D+NP DKQ +DRC
Sbjct: 1296 TKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRC 1355
Query: 133 HRVGQT 138
HR+GQT
Sbjct: 1356 HRIGQT 1361
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 344 (126.2 bits), Expect = 8.5e-30, P = 8.5e-30
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1089 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1148
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1149 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1208
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1209 RAHRLGQT 1216
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 344 (126.2 bits), Expect = 8.5e-30, P = 8.5e-30
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1093 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1152
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1153 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1212
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1213 RAHRLGQT 1220
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 344 (126.2 bits), Expect = 8.6e-30, P = 8.6e-30
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1099 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1158
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1159 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1218
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1219 RAHRLGQT 1226
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 350 (128.3 bits), Expect = 9.1e-30, P = 9.1e-30
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L++ +GK+ +D++LP LK NGHRVLIFSQ + LDIL Y+ R + R+DG + +
Sbjct: 2344 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGN 2403
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
RQE ID Y++ D F FLL TKAGGLGINLTAADTVII+D D+NP ND QA+ RCHR+
Sbjct: 2404 LRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRI 2463
Query: 136 GQ 137
GQ
Sbjct: 2464 GQ 2465
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 343 (125.8 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1092 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1151
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1152 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1211
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1212 RAHRLGQT 1219
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 343 (125.8 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1099 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1158
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1159 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1218
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1219 RAHRLGQT 1226
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 343 (125.8 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 63/120 (52%), Positives = 90/120 (75%)
Query: 19 VVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 78
V +SGKL KLDE+L +LK GHRVL++ Q ++D++ Y+ R +++ RLDG+T++ R
Sbjct: 1317 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1376
Query: 79 QELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
++ + ++ + D+F FLLST+AGGLGINLTAADTVI +D D+NP D QA DR HR+GQT
Sbjct: 1377 RDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQT 1436
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 342 (125.4 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 69/122 (56%), Positives = 88/122 (72%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK+ LD++L LK++GHRVLIFSQ + +LDILG YM+ RG+ + RLDG +S
Sbjct: 751 LITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSAS 810
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R+ I+ YN D FAF+LST+AGGLGINL ADTVI+ D D+NP D QA R HR+G
Sbjct: 811 RRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIG 870
Query: 137 QT 138
QT
Sbjct: 871 QT 872
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 342 (125.4 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 13 KVP--DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++P + L+ +SGKL LD +L LK GHRVLI+SQ ++D+L YM R ++RLD
Sbjct: 1086 RIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1145
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G++++S R++++ ++ D+F FLLST+AGGLGINLTAADTVI +D D+NP D+QA D
Sbjct: 1146 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1205
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 1206 RAHRLGQT 1213
>UNIPROTKB|J9P9W7 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00271 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 GeneTree:ENSGT00530000063427 EMBL:AAEX03004381
EMBL:AAEX03004385 EMBL:AAEX03004386 EMBL:AAEX03004382
EMBL:AAEX03004383 EMBL:AAEX03004384 EMBL:AAEX03004387
EMBL:AAEX03004388 Ensembl:ENSCAFT00000045283 OMA:PATANNS
Uniprot:J9P9W7
Length = 1470
Score = 336 (123.3 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 61/118 (51%), Positives = 87/118 (73%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+ GKL+ L +L LK GHRVLIF+Q +LD+L ++ G +LRLDG+T+V RQ
Sbjct: 284 DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA 343
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
L++ +N D+ +F F+LST++GG+G+NLT ADTV+ +D D+NP D QA+DRCHR+GQT
Sbjct: 344 LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 401
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 335 (123.0 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 66/123 (53%), Positives = 88/123 (71%)
Query: 16 DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
D +++ SGKL LD++L L++ HRVLIFSQ + +LDIL Y+ +RG++ RLDG+T+
Sbjct: 932 DKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKA 991
Query: 76 SSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHR 134
RQ+ +D +N D F FLLST+AGGLGINL ADTV+I D D+NP ND QA R HR
Sbjct: 992 ELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHR 1051
Query: 135 VGQ 137
+GQ
Sbjct: 1052 IGQ 1054
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 333 (122.3 bits), Expect = 9.7e-29, P = 9.7e-29
Identities = 63/127 (49%), Positives = 91/127 (71%)
Query: 13 KVPDDLVVE-SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
++ +DL+ SGK + LD +LP KK+GHRVL+F Q ++DI+ ++ + ++LRLDG
Sbjct: 809 RLTNDLIWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDG 868
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T+ RQ+++ +N D D F FLLST+AGGLG+NL ADTVII D D+NP+ D QA+D
Sbjct: 869 STKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 928
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 929 RAHRIGQ 935
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 330 (121.2 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 65/126 (51%), Positives = 89/126 (70%)
Query: 13 KVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
K P+ +V SGK + LD +LP LKK GHR+L+FSQ ++D+L Y+ + + +LRLDG+
Sbjct: 686 KKPE-IVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGS 744
Query: 73 TQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
T+ R L+ ++N D F FLLST+AGGLG+NL ADT+II D D+NP D+QAEDR
Sbjct: 745 TKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDR 804
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 805 AHRIGQ 810
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 336 (123.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 61/117 (52%), Positives = 87/117 (74%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
+GKL+ L +L LK GHRVLIF+Q +LD+L ++ G +LRLDG+T+V RQ L
Sbjct: 2030 AGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2089
Query: 82 IDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
++ +N D+ +F F+LST++GG+G+NLT ADTV+ +D D+NP D QA+DRCHR+GQT
Sbjct: 2090 MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 2146
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 336 (123.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 61/118 (51%), Positives = 87/118 (73%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+ GKL+ L +L LK GHRVLIF+Q +LD+L ++ G +LRLDG+T+V RQ
Sbjct: 2041 DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA 2100
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
L++ +N D+ +F F+LST++GG+G+NLT ADTV+ +D D+NP D QA+DRCHR+GQT
Sbjct: 2101 LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 2158
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 336 (123.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 61/118 (51%), Positives = 87/118 (73%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+ GKL+ L +L LK GHRVLIF+Q +LD+L ++ G +LRLDG+T+V RQ
Sbjct: 2041 DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA 2100
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
L++ +N D+ +F F+LST++GG+G+NLT ADTV+ +D D+NP D QA+DRCHR+GQT
Sbjct: 2101 LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 2158
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 336 (123.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 61/118 (51%), Positives = 87/118 (73%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+ GKL+ L +L LK GHRVLIF+Q +LD+L ++ G +LRLDG+T+V RQ
Sbjct: 2052 DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA 2111
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
L++ +N D+ +F F+LST++GG+G+NLT ADTV+ +D D+NP D QA+DRCHR+GQT
Sbjct: 2112 LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 2169
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 331 (121.6 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 471 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 530
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++R D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 531 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 590
Query: 137 QT 138
Q+
Sbjct: 591 QS 592
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 335 (123.0 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 63/130 (48%), Positives = 92/130 (70%)
Query: 11 KYKVPDDLVVE--SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLR 68
K PD +++ GKL++L +L LK+ GHR LIF+Q +LDI ++++ + +LR
Sbjct: 1365 KLYFPDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLR 1424
Query: 69 LDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQA 128
LDG+T++ RQ L + +N D +F F+LST++GGLG+NLT ADTVI +D D+NP D QA
Sbjct: 1425 LDGSTKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQA 1484
Query: 129 EDRCHRVGQT 138
+DRCHR+GQT
Sbjct: 1485 QDRCHRIGQT 1494
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 329 (120.9 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 67/128 (52%), Positives = 89/128 (69%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + L+ SGK+ LD++L LK+ G RVLIFSQ +LDIL YM RG+++ R+DG
Sbjct: 570 YTTGEHLIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDG 629
Query: 72 ATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T+ R+ I+ YN+ DLFAFLL+T+AGGLGI L AD VI+ D D+NP D QA+D
Sbjct: 630 STESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQD 689
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 690 RAHRIGQT 697
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 326 (119.8 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 354 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 413
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 414 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 473
Query: 137 QT 138
Q+
Sbjct: 474 QS 475
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 331 (121.6 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 523 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 582
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++R D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 583 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 642
Query: 137 QT 138
Q+
Sbjct: 643 QS 644
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 330 (121.2 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V SGKL +D++LP L+ GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1072 MVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNM 1131
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++R D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1132 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1191
Query: 137 QT 138
Q+
Sbjct: 1192 QS 1193
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 327 (120.2 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 67/121 (55%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+++ SGK+ LD++L LK +GHRVLIFSQ + +L+ILG YM +RG+ + RLDG S
Sbjct: 699 IIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASV 758
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R+ ID +N D F FLLST+AGGLGINL ADTVII D D+NP D QA R HR+G
Sbjct: 759 RRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIG 818
Query: 137 Q 137
Q
Sbjct: 819 Q 819
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 327 (120.2 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 66/121 (54%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L++ SGK+ LD++L L+++GHRVLIFSQ + +LDILG Y+ +RG+ H RLDG +
Sbjct: 685 LIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAV 744
Query: 78 RQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R+ ID +N F FLLST+AGGLGINL ADTVII D D+NP D QA R HR+G
Sbjct: 745 RRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 804
Query: 137 Q 137
Q
Sbjct: 805 Q 805
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 331 (121.6 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1286 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1345
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++R D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1346 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1405
Query: 137 QT 138
Q+
Sbjct: 1406 QS 1407
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 331 (121.6 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1337 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1396
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++R D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1397 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1456
Query: 137 QT 138
Q+
Sbjct: 1457 QS 1458
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 323 (118.8 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 64/126 (50%), Positives = 91/126 (72%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ D+ +++ K++KL ++L + +NG RV++FSQF VLDIL M + LR DG
Sbjct: 750 FQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDG 809
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+TQV RQ+LID++ D+ + FLLSTKAGG GINL A+ VI++DV FNP++D QAEDR
Sbjct: 810 STQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDR 869
Query: 132 CHRVGQ 137
HRVGQ
Sbjct: 870 AHRVGQ 875
>UNIPROTKB|B5MDZ7 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:AL356378 GO:GO:0003676 GO:GO:0004386
InterPro:IPR002589 PROSITE:PS51154 HGNC:HGNC:1916 ChiTaRS:CHD1L
IPI:IPI00400835 ProteinModelPortal:B5MDZ7 SMR:B5MDZ7 STRING:B5MDZ7
PRIDE:B5MDZ7 Ensembl:ENST00000361293 HOGENOM:HOG000074191
HOVERGEN:HBG104833 ArrayExpress:B5MDZ7 Bgee:B5MDZ7 Uniprot:B5MDZ7
Length = 616
Score = 319 (117.4 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 67/126 (53%), Positives = 85/126 (67%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
++V D L SGKL LD++L L GHRVL+FSQ +LDIL YMD RG+ + R+DG
Sbjct: 55 FEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDG 114
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 115 SVRGEERHLAIKNFGQ-QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAAR 173
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 174 AHRIGQ 179
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 326 (119.8 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 62/122 (50%), Positives = 89/122 (72%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL+ +GKL+ LD ILP LK GHR+L+F Q +++I +++ R + +LRLDG+T+
Sbjct: 844 DLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPD 903
Query: 77 SRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R +L+ ++N + DLF F+LST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+
Sbjct: 904 ERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRI 963
Query: 136 GQ 137
GQ
Sbjct: 964 GQ 965
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 325 (119.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 68/122 (55%), Positives = 84/122 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L LK GHRVLIFSQ + +LDIL Y+ +R + RLDG+ +
Sbjct: 706 LLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADL 765
Query: 78 RQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D YN FAFLLST+AGGLGINL ADTVII D D+NP ND QA R HR+G
Sbjct: 766 RKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 825
Query: 137 QT 138
QT
Sbjct: 826 QT 827
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 325 (119.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 67/121 (55%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L++ SGK+ LD++L LKK+GHRVLIFSQ + +LDILG Y+ I+G RLDG +
Sbjct: 690 LIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQ 749
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R+ ID +N D + F FLLST+AGGLGINL ADTV+I D D+NP D QA R HR+G
Sbjct: 750 RRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIG 809
Query: 137 Q 137
Q
Sbjct: 810 Q 810
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 328 (120.5 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1235 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1294
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1295 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1354
Query: 137 QT 138
Q+
Sbjct: 1355 QS 1356
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 328 (120.5 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1274 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1333
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1334 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1393
Query: 137 QT 138
Q+
Sbjct: 1394 QS 1395
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 328 (120.5 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1275 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1334
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1335 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394
Query: 137 QT 138
Q+
Sbjct: 1395 QS 1396
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 328 (120.5 bits), Expect = 9.9e-28, P = 9.9e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1284 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1343
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1344 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1403
Query: 137 QT 138
Q+
Sbjct: 1404 QS 1405
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 328 (120.5 bits), Expect = 9.9e-28, P = 9.9e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1285 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1344
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 137 QT 138
Q+
Sbjct: 1405 QS 1406
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 324 (119.1 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 69/122 (56%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V+ SGK+ L+++L L+K GHRVLIFSQ + +LDILG YM I+G++ RLDG S
Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728
Query: 78 RQELIDEYNR--DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R+ ID +N +D FAFLLST+AGGLGINL ADTVII D D+NP D QA R HR+
Sbjct: 729 RKIAIDHFNAPGSKD-FAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRI 787
Query: 136 GQ 137
GQ
Sbjct: 788 GQ 789
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 326 (119.8 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 745 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 804
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 805 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 864
Query: 137 QT 138
Q+
Sbjct: 865 QS 866
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 325 (119.5 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Query: 16 DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
D ++ SGKL LD++L LK+ GHRVLIFSQ + +LDIL Y+ R ++ RLDG+
Sbjct: 1058 DSMIRASGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSR 1117
Query: 76 SSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHR 134
R + +D +N D F FLLSTKAGGLGINL+ ADTVII D D+NP ND QAE R HR
Sbjct: 1118 EKRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHR 1177
Query: 135 VGQ 137
+GQ
Sbjct: 1178 IGQ 1180
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 323 (118.8 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 61/123 (49%), Positives = 88/123 (71%)
Query: 17 DLVVE-SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
DL+ +GK + LD +LP K +GHRVL+F Q V+DI+ ++ ++ +++RLDG+T+
Sbjct: 784 DLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKT 843
Query: 76 SSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHR 134
R E+++ +N D D F FLLST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR
Sbjct: 844 EERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 903
Query: 135 VGQ 137
+GQ
Sbjct: 904 IGQ 906
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 65/126 (51%), Positives = 86/126 (68%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ D L+ SGKL LD++L L GHRVL+FSQ +LDIL Y+D RG+ + R+DG
Sbjct: 338 FEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDG 397
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 398 SVRGEERHLAIKNFGQ-QPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAAR 456
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 457 AHRIGQ 462
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/126 (52%), Positives = 85/126 (67%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
++V + L+ SGKL LD +L L GHRVL+FSQ +LDIL YMD RG+ + R+DG
Sbjct: 330 FEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDG 389
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 390 SVRGEERHLAIKNFGK-QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAAR 448
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 449 AHRIGQ 454
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/126 (52%), Positives = 86/126 (68%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ D L+ SGKL LD++L L GHRVL+FSQ +LDIL YMD RG+ + R+DG
Sbjct: 341 FEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDG 400
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 401 SVRGEERHLAIKNFGQ-QPIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAAR 459
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 460 AHRIGQ 465
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 326 (119.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1082 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1141
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1142 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1201
Query: 137 QT 138
Q+
Sbjct: 1202 QS 1203
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 326 (119.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1129 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1188
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1189 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1248
Query: 137 QT 138
Q+
Sbjct: 1249 QS 1250
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 326 (119.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1128 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1187
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1188 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1247
Query: 137 QT 138
Q+
Sbjct: 1248 QS 1249
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 326 (119.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1128 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1187
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1188 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1247
Query: 137 QT 138
Q+
Sbjct: 1248 QS 1249
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 326 (119.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1130 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1189
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1190 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1249
Query: 137 QT 138
Q+
Sbjct: 1250 QS 1251
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 326 (119.8 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
+V +GKL +D++LP LK GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1129 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1188
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1189 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1248
Query: 137 QT 138
Q+
Sbjct: 1249 QS 1250
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 323 (118.8 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 62/129 (48%), Positives = 88/129 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
++ + +DL+ SGK +D+IL + + HRVLIF+Q V++++ Y ++ W LRLD
Sbjct: 926 EWDINEDLIRTSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLD 985
Query: 71 GATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+T+ R L+ E+NR D + F+LST AGGLG+NL ADTVII D D+NP D QA+
Sbjct: 986 GSTKPEERAHLVVEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQ 1045
Query: 130 DRCHRVGQT 138
DRCHR+GQT
Sbjct: 1046 DRCHRIGQT 1054
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 319 (117.4 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ D +V SGKL LD++L L GHRVL+FSQ +LDIL YMD RG+ + RLDG
Sbjct: 336 FEIGDHIVEASGKLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDG 395
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 396 SVRGEERHLAIKNFGQ-QPIFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIAR 454
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 455 AHRIGQ 460
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 319 (117.4 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 67/126 (53%), Positives = 85/126 (67%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
++V D L SGKL LD++L L GHRVL+FSQ +LDIL YMD RG+ + R+DG
Sbjct: 336 FEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDG 395
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 396 SVRGEERHLAIKNFGQ-QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAAR 454
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 455 AHRIGQ 460
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 319 (117.4 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 66/126 (52%), Positives = 85/126 (67%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
++V + L+ SGKL LD +L L GHRVL+FSQ +LDIL YMD RG+ + R+DG
Sbjct: 330 FEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDG 389
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + +Q +F FLLST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 390 SVRGEERHLAIKNFG-NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAAR 448
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 449 AHRIGQ 454
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 323 (118.8 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 59/117 (50%), Positives = 83/117 (70%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
+GK + LD++LP K GH+VLIF Q +++I+ ++ RG +++RLDG T+ R +L
Sbjct: 1101 AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDL 1160
Query: 82 IDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQ 137
+ +N D D F FLLST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+GQ
Sbjct: 1161 LKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1217
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 323 (118.8 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 59/117 (50%), Positives = 83/117 (70%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
+GK + LD++LP K GH+VLIF Q +++I+ ++ RG +++RLDG T+ R +L
Sbjct: 1101 AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDL 1160
Query: 82 IDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQ 137
+ +N D D F FLLST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+GQ
Sbjct: 1161 LKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1217
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 325 (119.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV +GKL LD++LP LK GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1165 LVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1224
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT +I D D+NP ND QA+ RCHR+G
Sbjct: 1225 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIG 1284
Query: 137 QT 138
Q+
Sbjct: 1285 QS 1286
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 472 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 531
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQE I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 532 QTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 591
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 592 RAHRIGQT 599
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 472 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 531
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQE I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 532 QTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 591
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 592 RAHRIGQT 599
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 472 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 531
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQE I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 532 QTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 591
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 592 RAHRIGQT 599
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 320 (117.7 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 703 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 762
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 763 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 822
Query: 137 Q 137
Q
Sbjct: 823 Q 823
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 317 (116.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 68/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 193 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 252
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQ+ I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 253 QTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 312
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 313 RAHRIGQT 320
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 318 (117.0 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 65/126 (51%), Positives = 83/126 (65%)
Query: 14 VPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMD-IRGWRHLRLDGA 72
+ + LV SGK+ LD ++P L GH++LIFSQF LDIL + +R W R+DGA
Sbjct: 617 IDETLVTASGKMLLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGA 676
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
+ RQ I +N D+D FLLST+AGG GINL AADTVI+ D D+NP D QA+DR
Sbjct: 677 ISQADRQAQIKAFNTDKDYKIFLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRA 736
Query: 133 HRVGQT 138
HR+GQT
Sbjct: 737 HRIGQT 742
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 319 (117.4 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 68/127 (53%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + LV SGK+ LD++L K G RVLIFSQ VLDIL Y R + + R+DG
Sbjct: 442 YTTDEHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDG 501
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T R E IDEYN D + F FLL+T+AGGLGINLT+AD VI++D D+NP D QA D
Sbjct: 502 STSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMD 561
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 562 RAHRIGQ 568
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 319 (117.4 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 68/127 (53%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + LV SGK+ LD++L K G RVLIFSQ VLDIL Y R + + R+DG
Sbjct: 442 YTTDEHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDG 501
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T R E IDEYN D + F FLL+T+AGGLGINLT+AD VI++D D+NP D QA D
Sbjct: 502 STSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMD 561
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 562 RAHRIGQ 568
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 320 (117.7 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 62/124 (50%), Positives = 88/124 (70%)
Query: 16 DDLVVES-GKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQ 74
+DL+ + GK + LD ILP K GHRVL+F Q +++I+ ++ +RG ++LRLDG+T+
Sbjct: 848 NDLIWRTAGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTK 907
Query: 75 VSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCH 133
R +L+ +N D + F FLLST+AGGLG+NL ADTVII D D+NP+ D QA+DR H
Sbjct: 908 SDDRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAH 967
Query: 134 RVGQ 137
R+GQ
Sbjct: 968 RIGQ 971
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 319 (117.4 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 61/118 (51%), Positives = 85/118 (72%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
SGK + LD ILP L ++GHR+L+F Q +++I+ Y+ R WR+LRLDG+T+ R +L
Sbjct: 735 SGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKL 794
Query: 82 IDEYNRDQ-DLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
+ +N ++ FLLST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+GQT
Sbjct: 795 LGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQT 852
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 323 (118.8 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 64/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1230 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1289
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1290 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1349
Query: 137 Q 137
Q
Sbjct: 1350 Q 1350
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 317 (116.6 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 66/127 (51%), Positives = 88/127 (69%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ + LV SGKL LD +L L++ GH VL+FSQ +LDIL Y++ RG+ + RLDG
Sbjct: 325 FEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDG 384
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I ++ +D+F FLLSTKAGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 385 SVRGEERNLAIKNFST-KDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAAR 443
Query: 132 CHRVGQT 138
HR+GQT
Sbjct: 444 AHRIGQT 450
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 68/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 471 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 530
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQ+ I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 531 QTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 590
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 591 RAHRIGQT 598
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 68/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 471 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 530
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQ+ I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 531 QTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 590
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 591 RAHRIGQT 598
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 68/128 (53%), Positives = 82/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 472 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 531
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQ+ I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 532 QTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 591
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 592 RAHRIGQT 599
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 320 (117.7 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 61/136 (44%), Positives = 98/136 (72%)
Query: 3 LKQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIR 62
LKQ++ + + D+ + SGKL L+++L K+ G++ L+F+QFI +LDIL +++
Sbjct: 1751 LKQSII---FPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHL 1807
Query: 63 GWRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNP 122
+ +RLDG+T+V RQ+++ ++N D+ +F F+ ST++G +GINLTAA+ VI +D D+NP
Sbjct: 1808 NYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNP 1867
Query: 123 YNDKQAEDRCHRVGQT 138
DKQA DRCHR+GQT
Sbjct: 1868 SIDKQAMDRCHRIGQT 1883
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 320 (117.7 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 61/136 (44%), Positives = 98/136 (72%)
Query: 3 LKQTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIR 62
LKQ++ + + D+ + SGKL L+++L K+ G++ L+F+QFI +LDIL +++
Sbjct: 1751 LKQSII---FPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHL 1807
Query: 63 GWRHLRLDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNP 122
+ +RLDG+T+V RQ+++ ++N D+ +F F+ ST++G +GINLTAA+ VI +D D+NP
Sbjct: 1808 NYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNP 1867
Query: 123 YNDKQAEDRCHRVGQT 138
DKQA DRCHR+GQT
Sbjct: 1868 SIDKQAMDRCHRIGQT 1883
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 316 (116.3 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 66/127 (51%), Positives = 85/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + L+ SGK+ LD++L LK+ G RVLIFSQ +LDIL Y R + + R+DG
Sbjct: 479 YTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDG 538
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T R E IDEYN+ + + F FLL+T+AGGLGINL ADTVI+ D D+NP D QA D
Sbjct: 539 STSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMD 598
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 599 RAHRIGQ 605
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 317 (116.6 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+LV +GKL+ L+ +LP L+ GHRVL+FSQF+ LD++ ++D G H RLDG
Sbjct: 916 NLVDAAGKLQLLELMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSL 975
Query: 77 SRQELIDEYNRDQD-LFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
+Q +ID+YN + FAFLLST++GG+GINL ADTVII D DFNP+ D QA R HR+
Sbjct: 976 EKQRMIDDYNAENSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRI 1035
Query: 136 GQ 137
GQ
Sbjct: 1036 GQ 1037
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 315 (115.9 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 65/127 (51%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y D LV +GK+ LD++LP LK RVLIFSQ +LDIL Y+ RG+++ R+DG
Sbjct: 484 YTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDG 543
Query: 72 ATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R I+ YN+ + F FLLST+AGGLGINL AD VI++D D+NP D QA+D
Sbjct: 544 NTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD 603
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 604 RAHRIGQ 610
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 314 (115.6 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ +GK L ++L LK GHRVLIFSQ +LDIL + D+ G+++ R+DG+
Sbjct: 935 LIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQ 994
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ+ ID YN F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 995 RQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1054
Query: 137 Q 137
Q
Sbjct: 1055 Q 1055
Score = 34 (17.0 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 11 KYKVPDDLVVESG 23
KY+V D + E+G
Sbjct: 601 KYEVQPDFISETG 613
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 314 (115.6 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ +GK L ++L LK GHRVLIFSQ +LDIL + D+ G+++ R+DG+
Sbjct: 935 LIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQ 994
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ+ ID YN F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 995 RQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1054
Query: 137 Q 137
Q
Sbjct: 1055 Q 1055
Score = 34 (17.0 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 11 KYKVPDDLVVESG 23
KY+V D + E+G
Sbjct: 601 KYEVQPDFISETG 613
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 315 (115.9 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 68/128 (53%), Positives = 83/128 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + LV SGK+ LD++L LK G RVLIFSQ VLDIL Y R +++ R+DG
Sbjct: 479 YTTDEHLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDG 538
Query: 72 ATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R IDEYN+ + F FLL+T+AGGLGINLT AD VI+ D D+NP D QA D
Sbjct: 539 GTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMD 598
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 599 RAHRIGQT 606
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 320 (117.7 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1176 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1235
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1236 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1295
Query: 137 Q 137
Q
Sbjct: 1296 Q 1296
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 320 (117.7 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1176 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1235
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1236 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1295
Query: 137 Q 137
Q
Sbjct: 1296 Q 1296
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 320 (117.7 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1177 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1236
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1237 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1296
Query: 137 Q 137
Q
Sbjct: 1297 Q 1297
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 320 (117.7 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1178 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1237
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1238 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1297
Query: 137 Q 137
Q
Sbjct: 1298 Q 1298
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 320 (117.7 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1179 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1238
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 1239 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1298
Query: 137 Q 137
Q
Sbjct: 1299 Q 1299
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 314 (115.6 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 65/127 (51%), Positives = 85/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV+ SGK+ LD++LP +++ G RVLIFSQ VLDIL Y RG+ + RLDG
Sbjct: 434 YTTDTHLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDG 493
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T +R++ ID +N + F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 494 NTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 553
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 554 RAHRIGQ 560
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 318 (117.0 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 60/126 (47%), Positives = 90/126 (71%)
Query: 15 PDDLVVE--SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
PD +++ GKL++L +L LK GHR LIF+Q +LD+L ++++ G+ ++RLDG+
Sbjct: 1065 PDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGS 1124
Query: 73 TQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRC 132
T RQ L+ +N + +F F+LST++GG+GINL ADTVI +D D+NP D+QA+DRC
Sbjct: 1125 TPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRC 1184
Query: 133 HRVGQT 138
HR+GQT
Sbjct: 1185 HRIGQT 1190
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 315 (115.9 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 65/122 (53%), Positives = 83/122 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 1019 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1078
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1079 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1138
Query: 137 QT 138
QT
Sbjct: 1139 QT 1140
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 319 (117.4 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK+ ++++LP L+K+GH+VLIFSQ + VLD+L ++ + R+DG +
Sbjct: 1516 LIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDL 1575
Query: 78 RQELIDEYNRDQ-DLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID ++++ D F FLL T+AGGLGINLTAADTVII D D+NP ND QA+ RCHR+G
Sbjct: 1576 RQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIG 1635
Query: 137 Q 137
Q
Sbjct: 1636 Q 1636
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 313 (115.2 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 68/128 (53%), Positives = 81/128 (63%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG
Sbjct: 457 YTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDG 516
Query: 72 ATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T RQ I+ YN F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 517 QTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 576
Query: 131 RCHRVGQT 138
R HR+GQT
Sbjct: 577 RAHRIGQT 584
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 314 (115.6 bits), Expect = 9.8e-27, P = 9.8e-27
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 700 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 759
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 760 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 819
Query: 137 QT 138
Q+
Sbjct: 820 QS 821
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 313 (115.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 64/127 (50%), Positives = 85/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + LV + KL+ LD++L LK+ G RVLIFSQ +LDIL Y R + + R+DG
Sbjct: 491 YTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDG 550
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+T R + ID+YN D F FLL+T+AGGLGINLT+AD V+++D D+NP D QA D
Sbjct: 551 STAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMD 610
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 611 RAHRIGQ 617
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 313 (115.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 67/129 (51%), Positives = 88/129 (68%)
Query: 11 KYKVPDDLVVE-SGKLKKLDEILP-DLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLR 68
KY +PD+ +E S K KL EIL ++ N +VLIFSQ VLDIL +DI G+ R
Sbjct: 971 KYWIPDEQFIETSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTR 1030
Query: 69 LDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQA 128
LDG+T V+ RQ +ID ++ + + FLLST +GGLGINLT A+ VI +D+ FNP D+QA
Sbjct: 1031 LDGSTPVNERQSIIDHFSSKETIPVFLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQA 1090
Query: 129 EDRCHRVGQ 137
EDR HR+GQ
Sbjct: 1091 EDRAHRLGQ 1099
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 315 (115.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 63/122 (51%), Positives = 83/122 (68%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP LK HRVL+F Q + I+ Y+ R + +LRLDG T+
Sbjct: 1092 DLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAE 1151
Query: 77 SRQELIDEYN-RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R EL+ ++N + D+F FLLST+AGGLG+NL ADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1152 DRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRI 1211
Query: 136 GQ 137
GQ
Sbjct: 1212 GQ 1213
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 312 (114.9 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 788 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 137 Q 137
Q
Sbjct: 908 Q 908
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 315 (115.9 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1051 LIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1110
Query: 78 RQELIDEYN-RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1111 RQEAIDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1170
Query: 137 Q 137
Q
Sbjct: 1171 Q 1171
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 315 (115.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1055 LIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1114
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1115 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1174
Query: 137 Q 137
Q
Sbjct: 1175 Q 1175
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 315 (115.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1114 LIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1173
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1174 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1233
Query: 137 Q 137
Q
Sbjct: 1234 Q 1234
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 310 (114.2 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 63/119 (52%), Positives = 86/119 (72%)
Query: 20 VESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQ 79
++S K+KKL +L + N R+LIFSQF VLDIL + ++ LRLDG+T V +RQ
Sbjct: 762 MDSAKVKKLCSLLKKSRPN-ERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQ 820
Query: 80 ELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
+LID+++ +++ FLLSTK+GG GINLT A+ VI+ D FNP++D QAEDR HRVGQT
Sbjct: 821 QLIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQT 879
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 314 (115.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 64/126 (50%), Positives = 89/126 (70%)
Query: 13 KVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGA 72
+V L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+
Sbjct: 788 EVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGS 847
Query: 73 TQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R
Sbjct: 848 IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 907
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 908 AHRIGQ 913
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 314 (115.6 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1011 LIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1070
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1071 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1130
Query: 137 Q 137
Q
Sbjct: 1131 Q 1131
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 309 (113.8 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 326 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 385
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 386 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 445
Query: 136 GQ 137
GQ
Sbjct: 446 GQ 447
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 312 (114.9 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 905
Query: 137 Q 137
Q
Sbjct: 906 Q 906
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1053 LIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1112
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1113 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1172
Query: 137 Q 137
Q
Sbjct: 1173 Q 1173
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1055 LIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1114
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1115 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1174
Query: 137 Q 137
Q
Sbjct: 1175 Q 1175
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 575 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 634
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 635 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 694
Query: 137 QT 138
Q+
Sbjct: 695 QS 696
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 575 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 634
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 635 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 694
Query: 137 QT 138
Q+
Sbjct: 695 QS 696
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1106 LIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1165
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1166 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1225
Query: 137 Q 137
Q
Sbjct: 1226 Q 1226
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 310 (114.2 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 66/127 (51%), Positives = 80/127 (62%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y LV SGK+ LD++LP L++ G RVLIFSQ +LDIL Y R + + RLDG
Sbjct: 420 YTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDG 479
Query: 72 ATQVSSRQELIDEYNRDQDL-FAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R I E+N D F F+LST+AGGLGINL AD VII+D D+NP D QA D
Sbjct: 480 QTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMD 539
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 540 RAHRIGQ 546
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L LK+ GHRVLIFSQ +LD+L ++D G+++ R+DG +
Sbjct: 1106 LIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL 1165
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 1166 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG 1225
Query: 137 Q 137
Q
Sbjct: 1226 Q 1226
>UNIPROTKB|F1N8K9 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
Uniprot:F1N8K9
Length = 559
Score = 304 (112.1 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 24 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 83
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 84 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 143
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 144 ARAHRIGQ 151
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 310 (114.2 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 402 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 461
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 462 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 521
Query: 137 Q 137
Q
Sbjct: 522 Q 522
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 312 (114.9 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 63/122 (51%), Positives = 81/122 (66%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP LK HRVL+F Q ++ IL Y R + +LRLDG T+
Sbjct: 1046 DLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSE 1105
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N + F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1106 DRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1165
Query: 136 GQ 137
GQ
Sbjct: 1166 GQ 1167
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1038 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1097
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1098 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1157
Query: 137 Q 137
Q
Sbjct: 1158 Q 1158
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1045 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1104
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1105 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1164
Query: 137 Q 137
Q
Sbjct: 1165 Q 1165
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1045 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1104
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1105 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1164
Query: 137 Q 137
Q
Sbjct: 1165 Q 1165
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1045 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1104
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1105 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1164
Query: 137 Q 137
Q
Sbjct: 1165 Q 1165
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 309 (113.8 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 407 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 466
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 467 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 526
Query: 136 GQ 137
GQ
Sbjct: 527 GQ 528
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1038 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1097
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1098 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1157
Query: 137 Q 137
Q
Sbjct: 1158 Q 1158
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 313 (115.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1038 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1097
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1098 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1157
Query: 137 Q 137
Q
Sbjct: 1158 Q 1158
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 313 (115.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1065 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1124
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1125 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1184
Query: 137 Q 137
Q
Sbjct: 1185 Q 1185
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 313 (115.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1067 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1126
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1127 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1186
Query: 137 Q 137
Q
Sbjct: 1187 Q 1187
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 313 (115.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL L ++L +LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG +
Sbjct: 1066 LIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNM 1125
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1126 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1185
Query: 137 Q 137
Q
Sbjct: 1186 Q 1186
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 310 (114.2 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 993 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1052
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1053 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1112
Query: 137 Q 137
Q
Sbjct: 1113 Q 1113
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 312 (114.9 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 755 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 814
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 815 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 874
Query: 137 Q 137
Q
Sbjct: 875 Q 875
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 312 (114.9 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 775 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 834
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 835 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 894
Query: 137 Q 137
Q
Sbjct: 895 Q 895
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 768 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 827
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 828 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 887
Query: 137 Q 137
Q
Sbjct: 888 Q 888
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 905
Query: 137 Q 137
Q
Sbjct: 906 Q 906
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 314 (115.6 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 778 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 837
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 838 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 897
Query: 137 QT 138
Q+
Sbjct: 898 QS 899
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 314 (115.6 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 778 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 837
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 838 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 897
Query: 137 QT 138
Q+
Sbjct: 898 QS 899
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 314 (115.6 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 778 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 837
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 838 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 897
Query: 137 QT 138
Q+
Sbjct: 898 QS 899
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 789 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 848
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 849 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 908
Query: 137 Q 137
Q
Sbjct: 909 Q 909
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 788 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 137 Q 137
Q
Sbjct: 908 Q 908
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 314 (115.6 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP L GH+VLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 777 MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL 836
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + + D D F FLL T+AGGLGINLTAADT II D D+NP ND QA+ RCHR+G
Sbjct: 837 RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 896
Query: 137 QT 138
Q+
Sbjct: 897 QS 898
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 799 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 858
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 859 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 918
Query: 137 Q 137
Q
Sbjct: 919 Q 919
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 307 (113.1 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 64/126 (50%), Positives = 85/126 (67%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
+++ D L+ SGKL LD++L L GHRVL+FSQ +LDIL Y+D RG+ + R+DG
Sbjct: 338 FEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDG 397
Query: 72 ATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDR 131
+ + R I + + Q +F FL ST+AGG+G+NLTAADTVI D DFNP ND QA R
Sbjct: 398 SVRGEERHLAIKNFGQ-QPIFTFL-STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAAR 455
Query: 132 CHRVGQ 137
HR+GQ
Sbjct: 456 AHRIGQ 461
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 311 (114.5 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 64/123 (52%), Positives = 83/123 (67%)
Query: 16 DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
+ LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 949 NSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG 1008
Query: 76 SSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHR 134
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR
Sbjct: 1009 GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 1068
Query: 135 VGQ 137
+GQ
Sbjct: 1069 IGQ 1071
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 309 (113.8 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 873 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 932
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 933 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 992
Query: 136 GQ 137
GQ
Sbjct: 993 GQ 994
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 308 (113.5 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 63/128 (49%), Positives = 87/128 (67%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K+ + ++ ++SGK+ KL E+L K+NG RVL+FSQF +DIL ++ + + +RLD
Sbjct: 914 KFALKNNEWMDSGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLD 973
Query: 71 GATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
G T V RQ ++D ++ + D+ FLLSTKAGG GINL A+ VII D FNP D QAE+
Sbjct: 974 GTTSVEDRQSIMDTFHENTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAEN 1033
Query: 131 RCHRVGQT 138
R HRVGQT
Sbjct: 1034 RAHRVGQT 1041
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 311 (114.5 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 66/122 (54%), Positives = 86/122 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L LK+ GHRVLIFSQ + +LD+L Y+ R + RLDG+ +
Sbjct: 831 LLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEM 890
Query: 78 RQELIDEYNRD--QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R++ +D +N + QD F FLLST+AGGLGINL ADTVII D D+NP ND QA+ R HR+
Sbjct: 891 RRQALDHFNAEGSQD-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRI 949
Query: 136 GQ 137
GQ
Sbjct: 950 GQ 951
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 308 (113.5 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 65/130 (50%), Positives = 90/130 (69%)
Query: 10 AKYKVPDDLVVESGKLKKLDEILPDL-KKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLR 68
+KY++ +D ++SGK+ L ++L + +VLIFS F VLDIL + ++ LR
Sbjct: 936 SKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 995
Query: 69 LDGATQVSSRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQA 128
LDG+TQV+ RQ LID++ D+D+ F+LSTKAGG GINL A+ VII D FNP++D+QA
Sbjct: 996 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQA 1055
Query: 129 EDRCHRVGQT 138
DR HRVGQT
Sbjct: 1056 ADRAHRVGQT 1065
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 305 (112.4 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 64/127 (50%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + +V SGK+ LD++L LK+ G RVLIFSQ +LDIL Y RG+ + RLDG
Sbjct: 478 YTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDG 537
Query: 72 ATQVSSRQELIDEYN-RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R+E I+ +N + F F+LST+AGGLGINL +AD VI++D D+NP D QA D
Sbjct: 538 QTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 597
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 598 RAHRIGQ 604
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 310 (114.2 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 935 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 994
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 995 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1054
Query: 137 Q 137
Q
Sbjct: 1055 Q 1055
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 310 (114.2 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 62/123 (50%), Positives = 83/123 (67%)
Query: 16 DDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQV 75
DD+ +GK + LD ILP LK GHRVLIF Q ++DI+ ++ ++LRLDG T+
Sbjct: 1080 DDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKS 1139
Query: 76 SSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHR 134
R EL+ +N D + F+LST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR
Sbjct: 1140 DERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 1199
Query: 135 VGQ 137
+GQ
Sbjct: 1200 IGQ 1202
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 310 (114.2 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 951 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1010
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1011 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1070
Query: 137 Q 137
Q
Sbjct: 1071 Q 1071
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 310 (114.2 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL LD++L L+ G+RVLIFSQ + +LDIL Y+ I+ + RLDG+ +
Sbjct: 788 LIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N D + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 137 Q 137
Q
Sbjct: 908 Q 908
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 310 (114.2 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 882 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 941
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 942 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1001
Query: 137 Q 137
Q
Sbjct: 1002 Q 1002
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 310 (114.2 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 965 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1024
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1025 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1084
Query: 137 Q 137
Q
Sbjct: 1085 Q 1085
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 309 (113.8 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1066 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1125
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1126 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1185
Query: 136 GQ 137
GQ
Sbjct: 1186 GQ 1187
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 310 (114.2 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 1017 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1076
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1077 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1136
Query: 137 Q 137
Q
Sbjct: 1137 Q 1137
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 310 (114.2 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGKL L ++L L+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 1019 LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGL 1078
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1079 RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1138
Query: 137 Q 137
Q
Sbjct: 1139 Q 1139
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 309 (113.8 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 309 (113.8 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1074 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1133
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N + F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1134 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1193
Query: 136 GQ 137
GQ
Sbjct: 1194 GQ 1195
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 306 (112.8 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 67/121 (55%), Positives = 81/121 (66%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LVV SGK+ LD++LP LK+ G RVLIFSQ VLDIL Y R + + RLDG T
Sbjct: 461 LVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEE 520
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ I+ +N + F F+LST+AGGLGINL AD VII+D D+NP D QA DR HR+G
Sbjct: 521 RQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIG 580
Query: 137 Q 137
Q
Sbjct: 581 Q 581
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 306 (112.8 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 64/127 (50%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + +V SGK+ LD++L +K+ G RVLIFSQ +LDIL Y RG+ + RLDG
Sbjct: 479 YTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDG 538
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R+E ID +N + F F+LST+AGGLGINL +AD VI++D D+NP D QA D
Sbjct: 539 QTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 598
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 599 RAHRIGQ 605
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 311 (114.5 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 63/122 (51%), Positives = 86/122 (70%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP +K GH+VLIFSQ + LDIL Y+ + + + R+DG + +
Sbjct: 1174 MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNL 1233
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQ-AEDRCHRV 135
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP ND Q A+ RCHR+
Sbjct: 1234 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHRI 1293
Query: 136 GQ 137
GQ
Sbjct: 1294 GQ 1295
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 312 (114.9 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 62/128 (48%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
+Y + D+L+ +GK LD +LP LK GHRVLIFSQ +++IL + + ++ LRLD
Sbjct: 2014 EYNIDDNLIRYAGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLD 2073
Query: 71 GATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+T+ R L++ +N + + F F+LST+AGGLG+NL ADTVII D D+NP D QA+
Sbjct: 2074 GSTKSDERGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQ 2133
Query: 130 DRCHRVGQ 137
DR HR+GQ
Sbjct: 2134 DRAHRIGQ 2141
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 303 (111.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 64/121 (52%), Positives = 80/121 (66%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK L ++L LK GHRVLIFSQ +LDI+ + G+R+ R+DG+
Sbjct: 921 LIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQM 980
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ+ ID YN F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 981 RQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1040
Query: 137 Q 137
Q
Sbjct: 1041 Q 1041
Score = 36 (17.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 11 KYKVPDDLVVESG 23
KY+V D V E+G
Sbjct: 587 KYEVQPDYVTETG 599
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 303 (111.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 64/121 (52%), Positives = 80/121 (66%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK L ++L LK GHRVLIFSQ +LDI+ + G+R+ R+DG+
Sbjct: 921 LIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQM 980
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ+ ID YN F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 981 RQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1040
Query: 137 Q 137
Q
Sbjct: 1041 Q 1041
Score = 36 (17.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 11 KYKVPDDLVVESG 23
KY+V D V E+G
Sbjct: 587 KYEVQPDYVTETG 599
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 305 (112.4 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 64/127 (50%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + +V SGK+ LD++L LK+ G RVLIFSQ +LDIL Y RG+ + RLDG
Sbjct: 478 YTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDG 537
Query: 72 ATQVSSRQELIDEYN-RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R+E I+ +N + F F+LST+AGGLGINL +AD VI++D D+NP D QA D
Sbjct: 538 QTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 597
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 598 RAHRIGQ 604
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 304 (112.1 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 63/127 (49%), Positives = 82/127 (64%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y L+ SGK+ LD++L L++ G RVL+FSQ +LDIL Y RG+ + RLDG
Sbjct: 399 YTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDG 458
Query: 72 ATQVSSRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
T R+E ID +N + F F+LST+AGGLGINL AD VI++D D+NP D QA D
Sbjct: 459 QTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD 518
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 519 RAHRIGQ 525
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 302 (111.4 bits), Expect = 9.7e-26, P = 9.7e-26
Identities = 63/148 (42%), Positives = 95/148 (64%)
Query: 1 MALKQTLDCA-----KYKVPDDLVVE-----SGKLKKLDEILPDLKKNGHRVLIFSQFIF 50
M L+Q +D Y P+DL +E SGKL+ L +++P L GH+VLI+SQF+
Sbjct: 571 MQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVN 630
Query: 51 VLDILGHYMDIRGWRHLRLDGATQVSSRQELIDEYNRDQDLF-AFLLSTKAGGLGINLTA 109
+LD++ + D+ + R+DG+ +R++ ++++N +D FLLST+A GLGINL
Sbjct: 631 MLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVG 690
Query: 110 ADTVIIHDVDFNPYNDKQAEDRCHRVGQ 137
ADTV++ D D+NP D QA DRCHR+GQ
Sbjct: 691 ADTVVLFDSDWNPQVDLQAMDRCHRIGQ 718
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 305 (112.4 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 63/122 (51%), Positives = 88/122 (72%)
Query: 19 VVES-GKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ES GKL+ LD+++ LK+ GHRVLI++QF +LD+L Y + W++ R+DG +
Sbjct: 590 LLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAE 649
Query: 78 RQELIDEYN-RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +N ++ + F FLLST+AGGLGINL ADTVII+D D+NP+ D QA R HR+G
Sbjct: 650 RQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 709
Query: 137 QT 138
QT
Sbjct: 710 QT 711
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 306 (112.8 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 57/118 (48%), Positives = 83/118 (70%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
+GK + LD ILP L GH+ L+F Q ++ I+ Y+ + W++LRLDG+T+ R L
Sbjct: 1186 AGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSL 1245
Query: 82 IDEYNRDQ-DLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
+ ++N + D++ F+LST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+GQT
Sbjct: 1246 LAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQT 1303
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 306 (112.8 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L SGKL L ++L LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 1029 LTKSSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGM 1088
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTV+I+D D+NP+ND QA R HR+G
Sbjct: 1089 RQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIG 1148
Query: 137 Q 137
Q
Sbjct: 1149 Q 1149
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 306 (112.8 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 64/121 (52%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L SGKL L ++L LK+ GHRVLIFSQ +LD+L +++ G+++ R+DG
Sbjct: 1055 LTKASGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGM 1114
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA R HR+G
Sbjct: 1115 RQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1174
Query: 137 Q 137
Q
Sbjct: 1175 Q 1175
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 300 (110.7 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 59/128 (46%), Positives = 89/128 (69%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y +++V + GK + L+ +L L N H+VLIFSQ+ +LDI+ +Y +G+ R+DG
Sbjct: 513 YPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDG 572
Query: 72 ATQVSSRQELIDEYNRDQDLFA-FLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+ ++ R+ I +++ ++ + FLLST+AGGLGINLTAADT I++D D+NP D QA D
Sbjct: 573 SVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 632
Query: 131 RCHRVGQT 138
RCHR+GQT
Sbjct: 633 RCHRIGQT 640
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 305 (112.4 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 62/121 (51%), Positives = 86/121 (71%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV GKL LD++L LK G+RVLIFSQ + +LDIL Y+ ++ ++ RLDG+ +
Sbjct: 791 LVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGEL 850
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+ R HR+G
Sbjct: 851 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 910
Query: 137 Q 137
Q
Sbjct: 911 Q 911
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 776 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 835
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 836 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 896 ARAHRIGQ 903
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 775 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 834
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 835 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 894
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 895 ARAHRIGQ 902
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 774 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 833
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 834 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 893
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 894 ARAHRIGQ 901
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 772 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 831
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 832 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 891
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 892 ARAHRIGQ 899
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 304 (112.1 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 758 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 817
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 818 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 877
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 878 ARAHRIGQ 885
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 304 (112.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 768 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 827
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 828 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 887
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 888 ARAHRIGQ 895
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 304 (112.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 768 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 827
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 828 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 887
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 888 ARAHRIGQ 895
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 304 (112.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 63/128 (49%), Positives = 88/128 (68%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 788 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 847
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 848 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 907
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 908 ARAHRIGQ 915
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 305 (112.4 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 57/118 (48%), Positives = 82/118 (69%)
Query: 21 ESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQE 80
+ GKL+ L +L L HR LIF+Q +LD+L ++ G+++ RLDG T V RQ
Sbjct: 1186 DCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQA 1245
Query: 81 LIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQT 138
+++ +N D +F F+LST++GG+G+NLT ADTVI +D D+NP D QA+DRCHR+GQT
Sbjct: 1246 MMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1303
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 302 (111.4 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 61/122 (50%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1018 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1077
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTVII D D+NP+ D QA+DR HR+
Sbjct: 1078 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 1137
Query: 136 GQ 137
GQ
Sbjct: 1138 GQ 1139
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 305 (112.4 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 64/124 (51%), Positives = 86/124 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
++ +GKL +D++LP LK GHRVLIFSQ + LDIL Y+ R + + R+DG + +
Sbjct: 1278 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1337
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNP--YNDKQAEDRCHR 134
RQ ID +++ D D F FLL T+AGGLGINLTAADT II D D+NP + QA+ RCHR
Sbjct: 1338 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHR 1397
Query: 135 VGQT 138
+GQ+
Sbjct: 1398 IGQS 1401
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 298 (110.0 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/121 (50%), Positives = 84/121 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L SGKL L ++L LK + HRVL+FSQ +L++L H+++ G+++ R+DG+ +
Sbjct: 581 LTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDL 640
Query: 78 RQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ+ ID +N + F FLLST+AGGLGINL ADTVII D D+NP+ND QA R HR+G
Sbjct: 641 RQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMG 700
Query: 137 Q 137
Q
Sbjct: 701 Q 701
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 301 (111.0 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1051 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1110
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1111 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1170
Query: 136 GQ 137
GQ
Sbjct: 1171 GQ 1172
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 301 (111.0 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1026 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1085
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1086 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1145
Query: 136 GQ 137
GQ
Sbjct: 1146 GQ 1147
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 301 (111.0 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1028 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1087
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1088 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1147
Query: 136 GQ 137
GQ
Sbjct: 1148 GQ 1149
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 301 (111.0 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1028 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1087
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1088 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1147
Query: 136 GQ 137
GQ
Sbjct: 1148 GQ 1149
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 301 (111.0 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1028 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1087
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1088 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1147
Query: 136 GQ 137
GQ
Sbjct: 1148 GQ 1149
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 301 (111.0 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1049 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1108
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1109 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1168
Query: 136 GQ 137
GQ
Sbjct: 1169 GQ 1170
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 301 (111.0 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1044 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1103
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1104 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1163
Query: 136 GQ 137
GQ
Sbjct: 1164 GQ 1165
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 301 (111.0 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1051 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1110
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1111 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1170
Query: 136 GQ 137
GQ
Sbjct: 1171 GQ 1172
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 301 (111.0 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
+L SGK + LD ILP L+ HRVL+F Q ++ I+ Y R + +LRLDG T+
Sbjct: 1051 ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE 1110
Query: 77 SRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ ++N F FLLST+AGGLG+NL AADTV+I D D+NP+ D QA+DR HR+
Sbjct: 1111 DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI 1170
Query: 136 GQ 137
GQ
Sbjct: 1171 GQ 1172
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 301 (111.0 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y R +++LRLDG T+
Sbjct: 1086 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAE 1145
Query: 77 SRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+ +N F FLLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+
Sbjct: 1146 DRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI 1205
Query: 136 GQ 137
GQ
Sbjct: 1206 GQ 1207
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 304 (112.1 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 63/122 (51%), Positives = 85/122 (69%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV S KL +D++L LK GH+VLIFSQ + L+IL Y+ R + + RLDG+ +
Sbjct: 1205 LVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEV 1264
Query: 78 RQELIDEY-NRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID + ++ + F FLLST+AGG+GINLT ADTVI+ D D+NP +D QA+ RCHR+G
Sbjct: 1265 RQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIG 1324
Query: 137 QT 138
QT
Sbjct: 1325 QT 1326
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 299 (110.3 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGKL+ LD+++ LK+ GHRVLI++QF L +L Y + W + R+DG
Sbjct: 519 LLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPE 578
Query: 78 RQELIDEYNRDQ-DLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ ID +N + + F FLLST+AGG+GINL ADTVII+D D+NP+ D QA R HR+G
Sbjct: 579 RQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLG 638
Query: 137 QT 138
QT
Sbjct: 639 QT 640
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 299 (110.3 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 61/121 (50%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK+ LD++LP LKK RVL+FSQ +LDI+ Y + + +LR+DG+T
Sbjct: 621 LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ I+++N + F FLLST+AGG+GINLT AD VI+ D D+NP D QA DR HR+G
Sbjct: 681 RQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIG 740
Query: 137 Q 137
Q
Sbjct: 741 Q 741
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 299 (110.3 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 61/121 (50%), Positives = 82/121 (67%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
L+ SGK+ LD++LP LKK RVL+FSQ +LDI+ Y + + +LR+DG+T
Sbjct: 621 LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
RQ I+++N + F FLLST+AGG+GINLT AD VI+ D D+NP D QA DR HR+G
Sbjct: 681 RQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIG 740
Query: 137 Q 137
Q
Sbjct: 741 Q 741
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 302 (111.4 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 62/128 (48%), Positives = 85/128 (66%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K+ +P +V GKL+ LD +LP LK HRVL FS +LD++ Y+ ++G+++LRLD
Sbjct: 1062 KHFLPP-IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLD 1120
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G T R LID +N+ F FLLS +AGG+G+NL AADTVI+ D D+NP D QA+
Sbjct: 1121 GQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQ 1180
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 1181 ARAHRIGQ 1188
>TAIR|locus:2054011 [details] [associations]
symbol:CHR8 "chromatin remodeling 8" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0010332 "response to
gamma radiation" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0010332 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AC005724 HOGENOM:HOG000170952 KO:K10841 IPI:IPI00524515
PIR:C84568 RefSeq:NP_179466.1 UniGene:At.39947
ProteinModelPortal:Q9ZV43 SMR:Q9ZV43 STRING:Q9ZV43 PaxDb:Q9ZV43
PRIDE:Q9ZV43 EnsemblPlants:AT2G18760.1 GeneID:816391
KEGG:ath:AT2G18760 TAIR:At2g18760 InParanoid:Q9ZV43 OMA:TETSNIF
PhylomeDB:Q9ZV43 ProtClustDB:CLSN2683061 ArrayExpress:Q9ZV43
Genevestigator:Q9ZV43 Uniprot:Q9ZV43
Length = 1187
Score = 296 (109.3 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 59/116 (50%), Positives = 79/116 (68%)
Query: 22 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSRQEL 81
SGK+K + E+L K+ GHRVL+FSQ +LDIL ++ + + R+DG T V R L
Sbjct: 726 SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMAL 785
Query: 82 IDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVGQ 137
IDE+N +D+F F+L+TK GGLG NLT A+ VII D D+NP ND QA +R R+GQ
Sbjct: 786 IDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQ 841
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 168 (64.2 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 80 ELIDEYN---RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
+++D+ N +QD F+LST++G LG+NL ADTVII D DFNP+ D QA RCHR+G
Sbjct: 1389 QIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIG 1448
Query: 137 Q 137
Q
Sbjct: 1449 Q 1449
Score = 162 (62.1 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + ++++ SGK + LD +LP L K H+VLIFSQ +++IL Y++ RG+++ RLDG
Sbjct: 1182 YNIDENIIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDG 1241
Query: 72 ATQVSSRQELIDEYNRD 88
+ R+++ID++N +
Sbjct: 1242 NIGLQERKKIIDQFNNN 1258
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 168 (64.2 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 80 ELIDEYN---RDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
+++D+ N +QD F+LST++G LG+NL ADTVII D DFNP+ D QA RCHR+G
Sbjct: 1389 QIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIG 1448
Query: 137 Q 137
Q
Sbjct: 1449 Q 1449
Score = 162 (62.1 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + ++++ SGK + LD +LP L K H+VLIFSQ +++IL Y++ RG+++ RLDG
Sbjct: 1182 YNIDENIIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDG 1241
Query: 72 ATQVSSRQELIDEYNRD 88
+ R+++ID++N +
Sbjct: 1242 NIGLQERKKIIDQFNNN 1258
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 295 (108.9 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 64/129 (49%), Positives = 84/129 (65%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y + +V SGK+ LD++L LK+ G RVLIFSQ +LDIL Y RG+ + RLDG
Sbjct: 488 YTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDG 547
Query: 72 ATQVSSRQ--ELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQA 128
T R+ E I+ +N + F F+LST+AGGLGINL +AD VI++D D+NP D QA
Sbjct: 548 QTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQA 607
Query: 129 EDRCHRVGQ 137
DR HR+GQ
Sbjct: 608 MDRAHRIGQ 616
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 293 (108.2 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 65/128 (50%), Positives = 85/128 (66%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 774 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 833
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ RQ L D +N + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 834 GSIGELRRQAL-DHFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 892
Query: 130 DRCHRVGQ 137
R HR+GQ
Sbjct: 893 ARAHRIGQ 900
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 60/122 (49%), Positives = 84/122 (68%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGKL+ L ILP L+ GHRVL+F Q ++ I+ ++ ++LRLDG+T+
Sbjct: 677 DLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPD 736
Query: 77 SRQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRV 135
R L+D++N + + F F+LST+AGGLG+NL ADTVII D D+NP+ D QA+DR HR+
Sbjct: 737 ERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRI 796
Query: 136 GQ 137
GQ
Sbjct: 797 GQ 798
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 294 (108.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 59/121 (48%), Positives = 80/121 (66%)
Query: 17 DLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVS 76
DL SGK + LD ILP L+ H+VL+F Q ++ I+ Y RG+++LRLDG T+
Sbjct: 1066 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1125
Query: 77 SRQELIDEYNRDQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R L+ +N + LLST+AGGLG+NL +ADTVII D D+NP+ D QA+DR HR+G
Sbjct: 1126 DRGMLLT-FNEPGSEYFILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1184
Query: 137 Q 137
Q
Sbjct: 1185 Q 1185
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/121 (51%), Positives = 80/121 (66%)
Query: 18 LVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSS 77
LV SGK+ LD++L K+ G RVLIFSQF +LD+L + R + + RLDG+T
Sbjct: 430 LVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHED 489
Query: 78 RQELIDEYNR-DQDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAEDRCHRVG 136
R I+ YN D F F+L+T+AGGLGINL AD VII+D D+NP +D QA DR HR+G
Sbjct: 490 RSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIG 549
Query: 137 Q 137
Q
Sbjct: 550 Q 550
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 294 (108.6 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 63/127 (49%), Positives = 84/127 (66%)
Query: 12 YKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 71
Y++ + L +GKL L ++L LK HRVLIFSQ +LDIL +++ +++ R+DG
Sbjct: 1042 YEI-NSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDG 1100
Query: 72 ATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAED 130
+ RQE ID +N F FLLST+AGGLGINL ADTVII+D D+NP+ND QA
Sbjct: 1101 GITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS 1160
Query: 131 RCHRVGQ 137
R HR+GQ
Sbjct: 1161 RAHRIGQ 1167
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 293 (108.2 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 62/127 (48%), Positives = 86/127 (67%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 770 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 829
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 830 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 889
Query: 130 DRCHRVG 136
R HR G
Sbjct: 890 ARAHRHG 896
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 293 (108.2 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 62/127 (48%), Positives = 86/127 (67%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 770 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 829
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 830 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 889
Query: 130 DRCHRVG 136
R HR G
Sbjct: 890 ARAHRHG 896
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 293 (108.2 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 62/127 (48%), Positives = 86/127 (67%)
Query: 11 KYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 70
K + L+ SGKL LD++L L++ G+RVLIFSQ + +LDIL Y+ R + RLD
Sbjct: 771 KQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 830
Query: 71 GATQVSSRQELIDEYNRD-QDLFAFLLSTKAGGLGINLTAADTVIIHDVDFNPYNDKQAE 129
G+ + R++ +D +N + + F FLLST+AGGLGINL +ADTV+I D D+NP ND QA+
Sbjct: 831 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 890
Query: 130 DRCHRVG 136
R HR G
Sbjct: 891 ARAHRHG 897
WARNING: HSPs involving 280 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.141 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.40 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 530
No. of states in DFA: 570 (61 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.03u 0.07s 14.10t Elapsed: 00:00:21
Total cpu time: 14.07u 0.07s 14.14t Elapsed: 00:00:22
Start: Thu Aug 15 13:51:30 2013 End: Thu Aug 15 13:51:52 2013
WARNINGS ISSUED: 2