BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2047
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VL72|SMRCD_DROME SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Drosophila melanogaster GN=Etl1 PE=1 SV=1
Length = 844
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 140/217 (64%), Gaps = 5/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
E + F+ Q+ +AKRI+ PF+LRRLKKDVL LPKK +LV KVPM Q Y L++ +
Sbjct: 496 EVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYY 555
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
S S+E + +++ M +R++ANHPL +R+YF + LR + L ++K TN
Sbjct: 556 SNNKGEVCS--SSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTN 613
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
QYI E+++ +SD+ ++Q+ KH+ D K+PD+L+ +SGK LD +LP LK GHR
Sbjct: 614 EQYIFEELAVMSDFQVYQMMNKHEFYDV---KIPDNLICDSGKFLYLDTLLPKLKAEGHR 670
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
VL+FSQF +LDI+ Y+ IR + RLDGAT V+ R
Sbjct: 671 VLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVR 707
>sp|Q5FWR0|SMRCD_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Xenopus
tropicalis GN=smarcad1 PE=2 SV=1
Length = 1003
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 139/217 (64%), Gaps = 6/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
EQ FE E++ AK+I+ PF+LRR+K +VL +LP K + M Q + Y L+
Sbjct: 676 EQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKL 735
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
KK+ + + +++E+ ++ M LRKMANHPL R Y+ + LR ++ ++++PT+ N
Sbjct: 736 KKSI--DATEKNSELCNV--MMHLRKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDAN 791
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
P I ED+ ++D+++H+L + TL ++YK+ +L+++SGK L+++L D+KK G R
Sbjct: 792 PDLIFEDMEVMTDFELHRLCNEFTTL--SQYKLEKELILDSGKFNILEKLLSDIKKKGDR 849
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
V++FSQF +LDI+ ++ R++RLDG TQ+S R
Sbjct: 850 VVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISER 886
>sp|D3Z9Z9|SMRCD_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Rattus
norvegicus GN=Smarcad1 PE=3 SV=1
Length = 1024
Score = 154 bits (388), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
EQ+ +E E++ AK+II PF+LRR+K++VL LP K + M Q + Y GL
Sbjct: 697 EQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRL 756
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
KK+ N N ++ M LRKMANHPL R Y+ L+E++ ++++PT+ N
Sbjct: 757 KKSIN----NLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEAN 812
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
P I ED+ ++D+++H L +++ ++ Y++ DL+++SGK + L IL +LK+ G R
Sbjct: 813 PDLIFEDMEVMTDFELHVLCKQYQHIN--SYQLDMDLILDSGKFRTLGCILSELKQKGDR 870
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
V++FSQF +LDIL + R+LRLDG TQ+S R
Sbjct: 871 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 907
>sp|Q04692|SMRCD_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Mus
musculus GN=Smarcad1 PE=1 SV=2
Length = 1021
Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
EQ+ +E E++ AK+II PF+LRR+K++VL LP K + M Q + Y GL
Sbjct: 694 EQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRL 753
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
KK+ N N ++ M LRKMANHPL R Y+ L+E++ ++++PT+ N
Sbjct: 754 KKSIN----NLEKNTEMCNVMMQLRKMANHPLLHRQYYTPEKLKEMSQLMLKEPTHCEAN 809
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
P I ED+ ++D+++H L +++ ++ Y++ DL+++SGK + L IL +LK+ G R
Sbjct: 810 PDLIFEDMEVMTDFELHVLCKQYQHIN--SYQLDMDLILDSGKFRALGCILSELKQKGDR 867
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
V++FSQF +LDIL + R+LRLDG TQ+S R
Sbjct: 868 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 904
>sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Homo
sapiens GN=SMARCAD1 PE=1 SV=2
Length = 1026
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 133/217 (61%), Gaps = 6/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
EQ+ +E E++ AK+II PF+LRR+K++VL +LP K + M Q + Y GL
Sbjct: 699 EQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRL 758
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
KK+ N N ++ M LRKMANHPL R Y+ L+E++ ++++PT+ N
Sbjct: 759 KKSIN----NLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEAN 814
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
P I ED+ ++D+++H L +++ ++ +++ DL+++SGK + L IL +LK+ G R
Sbjct: 815 PDLIFEDMEVMTDFELHVLCKQYRHIN--NFQLDMDLILDSGKFRVLGCILSELKQKGDR 872
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
V++FSQF +LDIL + R+LRLDG TQ+S R
Sbjct: 873 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 909
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
EQ+ +E E++ AK+II PF+LRR+K++VL +LP K + M Q + Y L
Sbjct: 701 EQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRL 760
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
KK+ N N ++ M LRKMANHPL R Y+ L+E++ ++++PT+ N
Sbjct: 761 KKSIN----NMEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEAN 816
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
P I ED+ ++D+++H L +++ ++ +++ DL+++SGK + L IL +LK+ G R
Sbjct: 817 PDLIFEDMEVMTDFELHVLCKQYRHIN--NFQLDMDLILDSGKFRVLGCILSELKQKGDR 874
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
V++FSQF +LDIL + R+LRLDG TQ+S R
Sbjct: 875 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 911
>sp|E7F1C4|SMRDB_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1B OS=Danio
rerio GN=smarcad1b PE=3 SV=1
Length = 954
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 8/218 (3%)
Query: 16 KEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMED 75
+EQ++FE +++ AK I+ PF+LRR+K +VL +LP K V M Q E Y L+
Sbjct: 628 EEQSSFERDRITHAKLIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHK 687
Query: 76 FKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGT 135
K ++N E +N + M LRKM+NHPL R ++ L+ ++ ++++P+++
Sbjct: 688 LKHSSNGEKRELTN------VMMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHRDA 741
Query: 136 NPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGH 195
+P I ED+ LSD+++H+L ++ L +Y++ D++++SGKL L ++L LK+ G
Sbjct: 742 DPALIKEDMEVLSDFELHRLCQQYSALH--EYQLNTDVLLDSGKLSLLTQLLNSLKEKGD 799
Query: 196 RVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
RV++FSQF +LDIL ++ R+ RLDG+T +S R
Sbjct: 800 RVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDR 837
>sp|G5EDG2|SMRCD_CAEEL SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Caenorhabditis elegans GN=M03C11.8 PE=3 SV=1
Length = 989
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 132/220 (60%), Gaps = 13/220 (5%)
Query: 16 KEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMED 75
K +A ++ +++++AK I+ P++LRRLK VL LP K+ +I+V M Q + Y ++E
Sbjct: 600 KNKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEA 659
Query: 76 FKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIAD--CLVEDPTYK 133
+++ S S M LR+ ANHPL R + + L +IA CL E Y
Sbjct: 660 LQQSEESGDSYGS--------LMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLRE-KAYA 710
Query: 134 GTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKN 193
Q++ ED++WLSD IHQL + + +K+ + + L ++SGK ++LD +LP+++K
Sbjct: 711 DKKWQHVSEDLAWLSDIKIHQLCERFRC--TSKFLLNEQLALKSGKCEQLDVMLPEIQKK 768
Query: 194 GHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
G +VLIFSQF +LDIL Y++IRG+ + RLDG T V R
Sbjct: 769 GDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDR 808
>sp|O74842|FFT2_SCHPO ATP-dependent helicase fft2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft2 PE=1 SV=1
Length = 1284
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 135/229 (58%), Gaps = 15/229 (6%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAE---KYRGLM 73
EQA +++ +AK +++PF+LRR K VL +LPKKT ++ + +Q E +Y L
Sbjct: 754 EQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQ 813
Query: 74 ED---------FKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIAD 124
++ K++ N E S+ +S + M LRK ANH L R ++ + L+++A
Sbjct: 814 KNQQLRRDDKRNKRSKNDEESD-GKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAK 872
Query: 125 CLVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLD 184
++++ YK N QYI ED+ +SD+++H+L TL Y + DD ++SGK++ L
Sbjct: 873 DIMQEEQYKNANEQYIYEDMEVMSDFELHRLCRSFPTLQS--YTLKDDPWMDSGKIRVLK 930
Query: 185 EILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
E+LP +K+ G R+L+FSQF +LDIL +D ++RLDG+TQV R
Sbjct: 931 ELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVR 979
>sp|B0R061|SMRDA_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1A OS=Danio
rerio GN=smarcad1a PE=2 SV=1
Length = 972
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 126/213 (59%), Gaps = 8/213 (3%)
Query: 21 FEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTA 80
F +++ QA+ I+ PF+LRR+K +VL ELP K + PM +Q + Y L + KKT
Sbjct: 652 FHKDRIAQARLIMKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKRLKKTP 711
Query: 81 NPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
N + N + M LRKMANHPL R Y+ + L ++ ++++PT+ +P I
Sbjct: 712 NGDKRELCN------VMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHYDADPALI 765
Query: 141 LEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
ED+ +SD+++H L ++ ++ + +++ L+++SGK L + L LK+ G RV++F
Sbjct: 766 QEDMEVMSDFELHNLCREYSSI--SGFQLEKALILDSGKFALLTKTLAKLKEKGDRVVLF 823
Query: 201 SQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
SQF +LDI+ + +++RLDG+T ++ R
Sbjct: 824 SQFTMMLDIVEILLKHLDHQYVRLDGSTPMAER 856
>sp|O42861|FFT3_SCHPO ATP-dependent helicase fft3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft3 PE=1 SV=1
Length = 922
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 131/228 (57%), Gaps = 13/228 (5%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRG----- 71
E+A ++V +AK +++PF+LRR K VL LPKKT ++ + +Y
Sbjct: 591 ERALLSEQRVSRAKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQ 650
Query: 72 -----LMEDFKKTANPEGSNRSNEISHMSMFMM-LRKMANHPLGLRYYFQENTLREIADC 125
L E+ KT +N + + S ++ LRK+A+HP+ R +++++ LR++A
Sbjct: 651 SVNSLLDENVMKTNLDTNANLAKKKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKA 710
Query: 126 LVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDE 185
++ +P YK N YI ED+ ++SD ++H L K +++ +++ D+ +++ K++KL +
Sbjct: 711 IMNEPQYKKANELYIFEDMQYMSDIELHNLCCKFPSIN--SFQLKDEPWMDATKVRKLKK 768
Query: 186 ILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+L + +NG RV++FSQF VLDIL M + LR DG+TQV R
Sbjct: 769 LLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFR 816
>sp|P87114|FFT1_SCHPO ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft1 PE=3 SV=1
Length = 944
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 13/217 (5%)
Query: 17 EQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF 76
E+A E++ +AK I++PF+LRR K++VL++LP K V M +Q Y ++E
Sbjct: 616 ERAYLSQERISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLE-L 674
Query: 77 KKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTN 136
K N +NR N + M LRK A H L R + TL ++ ++ + Y N
Sbjct: 675 KNLVN---ANREN------ILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLDAN 725
Query: 137 PQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
PQYI ED+ +SD+++H+L+ +++ L + + ++S K+KKL +L + N R
Sbjct: 726 PQYIFEDMEVMSDFELHKLADQYRHLH--PFALKGKPWMDSAKVKKLCSLLKKSRPN-ER 782
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+LIFSQF VLDIL + ++ LRLDG+T V +R
Sbjct: 783 ILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETR 819
>sp|P31380|FUN30_YEAST ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FUN30 PE=1 SV=1
Length = 1131
Score = 100 bits (249), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 126/234 (53%), Gaps = 13/234 (5%)
Query: 12 EDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY-- 69
+D + E + +AK ++ PF+LRR K VL LP K + + Q + Y
Sbjct: 773 DDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDK 832
Query: 70 --------RGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLRE 121
+ +++D + + + ++ S ++ M LRK + HPL R + + + +
Sbjct: 833 EIQIVLEHKRMIKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITK 892
Query: 122 IADCLVEDPTY-KGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKL 180
++D ++++P Y + N +YI ED+S+++D+++H+L +KY++ +D ++SGK+
Sbjct: 893 MSDAILDEPAYAENGNKEYIKEDMSYMTDFELHKLCCNFPNT-LSKYQLHNDEWMQSGKI 951
Query: 181 KKLDEILPDLKKNGH-RVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
L ++L + + +VLIFS F VLDIL + ++ LRLDG+TQV+ R
Sbjct: 952 DALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDR 1005
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 52/233 (22%)
Query: 4 DSEDDARYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIP 63
D E D +D+ +E E + R I PF+LRRLKKDV LP KT +++V +
Sbjct: 567 DQEIDFENQDEEQE------EYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSD 620
Query: 64 SQAEKYRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYF---QENTLR 120
Q E Y+ ++ K + + S +++ L+K +NHP Y F +E L+
Sbjct: 621 VQTEYYKNILT--KNYSALTAGAKGGHFSLLNIMNELKKASNHP----YLFDNAEERVLQ 674
Query: 121 EIADCLVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKL 180
+ D + V L++ SGK+
Sbjct: 675 KFGDG-------------------------------------KMTRENVLRGLIMSSGKM 697
Query: 181 KKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
LD++L LKK+GHRVLIFSQ + +LDILG Y+ I+G RLDG + R
Sbjct: 698 VLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQR 750
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 100/225 (44%), Gaps = 59/225 (26%)
Query: 10 RYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY 69
RY+D KE E + +++ PF+LRR+K +V TELPKKT +VI M Q + Y
Sbjct: 236 RYQDIEKES-----ESASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYY 290
Query: 70 RG-LMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVE 128
+ LM+D N + ++ ++ LRK +HP Y F
Sbjct: 291 KAILMKDLDAFEN----ETAKKVKLQNILSQLRKCVDHP----YLFD------------- 329
Query: 129 DPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILP 188
G P+ ++V D L SGKL LD++L
Sbjct: 330 -----GVEPE---------------------------PFEVGDHLTEASGKLHLLDKLLA 357
Query: 189 DLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
L GHRVL+FSQ +LDIL YMD RG+ + R+DG+ + R
Sbjct: 358 FLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEER 402
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 99/225 (44%), Gaps = 59/225 (26%)
Query: 10 RYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY 69
RY+D KE + + R++ PF+LRR+K V TELPKKT +V+ M Q + Y
Sbjct: 230 RYQDIEKESKS-----ASELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYY 284
Query: 70 RG-LMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVE 128
+ LM+D N + ++ ++ LRK +HP Y F
Sbjct: 285 KAILMKDLDAFEN----ETAKKVKLQNILTQLRKCVDHP----YLFD------------- 323
Query: 129 DPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILP 188
G P+ ++V + L+ SGKL LD +L
Sbjct: 324 -----GVEPE---------------------------PFEVGEHLIEASGKLHLLDRLLA 351
Query: 189 DLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
L GHRVL+FSQ +LDIL YMD RG+ + R+DG+ + R
Sbjct: 352 FLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEER 396
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 44/202 (21%)
Query: 33 ISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNEIS 92
+ PF+LRRLKKDV LP K+ +++V + Q E Y+ ++ + R ++S
Sbjct: 601 LQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRG-QLS 659
Query: 93 HMSMFMMLRKMANHPLGLRYYFQENTLREI-ADCLVEDPTYKGTNPQYILEDISWLSDYD 151
+++ + L+K++NHP Y F + + + + T +G
Sbjct: 660 LLNIVVELKKVSNHP----YLFPGAAEKWMMGRKMTREDTLRG----------------- 698
Query: 152 IHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILG 211
+++ SGK+ LD++L LK +GHRVLIFSQ + +L+ILG
Sbjct: 699 ---------------------IIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILG 737
Query: 212 HYMDIRGWRHLRLDGATQVSSR 233
YM +RG+ + RLDG S R
Sbjct: 738 EYMSLRGYNYQRLDGTIPASVR 759
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 59/225 (26%)
Query: 10 RYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY 69
RY+D KE E + +++ PF+LRR+K +V TELP+KT +VI M Q + Y
Sbjct: 238 RYQDIEKES-----ESASELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYY 292
Query: 70 RG-LMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVE 128
+ LM+D N + ++ ++ LRK +HP Y F
Sbjct: 293 KAILMKDLDAFEN----ETAKKVKLQNVLSQLRKCVDHP----YLFD------------- 331
Query: 129 DPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILP 188
G P+ +++ D L+ SGKL LD++L
Sbjct: 332 -----GVEPE---------------------------PFEIGDHLIEASGKLHLLDKLLA 359
Query: 189 DLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
L GHRVL+FSQ +LDIL Y+D RG+ + R+DG+ + R
Sbjct: 360 FLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEER 404
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F T
Sbjct: 1173 EQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF--TFLS 1230
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G ++N + ++ M LRK NHP L +E L E + T+ +P + L+
Sbjct: 1231 KGGGQANVPNLLNTMMELRKCCNHPY-LINGAEEKILEEFKE------THNAESPDFQLQ 1283
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
++ +GKL +D++LP LK GHRVLIFSQ
Sbjct: 1284 -----------------------------AMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQ 1314
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1315 MVRCLDILEDYLIQRRYPYERIDG 1338
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F T
Sbjct: 1163 EQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF--TFLS 1220
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G ++N + ++ M LRK NHP L +E L E + T+ +P + L+
Sbjct: 1221 KGGGQANVPNLLNTMMELRKCCNHPY-LINGAEEKILEEFKE------THNAESPDFQLQ 1273
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
++ +GKL +D++LP LK GHRVLIFSQ
Sbjct: 1274 -----------------------------AMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQ 1304
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1305 MVRCLDILEDYLIQRRYPYERIDG 1328
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 51/213 (23%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPE 83
+Q+++ ++ P MLRRLK DVLT +P K L+++V + Q + Y+ ++ T N +
Sbjct: 831 DQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNIL-----TRNFD 885
Query: 84 GSNRSNEISHMSM---FMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
N N + MS+ M L+K NHP Y F + L +++ Y+G+
Sbjct: 886 ALNVKNGGTQMSLINIIMELKKCCNHP----YLFMKACLEAPK---LKNGMYEGSA---- 934
Query: 141 LEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
L+ +GK L ++L LK GHRVLIF
Sbjct: 935 --------------------------------LIKNAGKFVLLQKMLRKLKDGGHRVLIF 962
Query: 201 SQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
SQ +LDIL + D+ G+++ R+DG+ R
Sbjct: 963 SQMTMMLDILEDFCDVEGYKYERIDGSITGQQR 995
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F +
Sbjct: 1174 EQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS-- 1231
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G ++N + ++ M LRK NHP L +E L E + T+ +P + L+
Sbjct: 1232 KGGGQANVPNLLNTMMELRKCCNHPY-LINGAEEKILEEFKE------THNADSPDFQLQ 1284
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
++ +GKL +D++LP LK GHRVLIFSQ
Sbjct: 1285 -----------------------------AMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQ 1315
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1316 MVRCLDILEDYLIQRRYPYERIDG 1339
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 45/210 (21%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPE 83
+Q+ + ++ P MLRRLK DV +P KT L+++V + P Q + Y+ ++ + N
Sbjct: 951 DQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSR 1010
Query: 84 GSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILED 143
G N++S +++ M L+K NHP Y F P +P+
Sbjct: 1011 GG--GNQVSLLNIMMDLKKCCNHP----YLF---------------PVAAMESPK----- 1044
Query: 144 ISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQF 203
L Y+ L+ SGKL L ++L LK+ GHRVLIFSQ
Sbjct: 1045 ------------------LPSGAYEG-GALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
Query: 204 IFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+LD+L ++D G+++ R+DG + R
Sbjct: 1086 TKMLDLLEDFLDYEGYKYERIDGGITGALR 1115
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 54/209 (25%)
Query: 26 VDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRG-LMEDFKKTANPEG 84
VD+ +++ PF+LRR+K +V ELPKKT LV+ + Q Y+ LM D +
Sbjct: 236 VDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDL----DAFR 291
Query: 85 SNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDI 144
+++S + +++ M LRK +HP Y F G P+
Sbjct: 292 TDQSTKTRLLNVLMQLRKCVDHP----YLFD------------------GVEPE------ 323
Query: 145 SWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFI 204
+++ + LV SGKL LD +L L++ GH VL+FSQ
Sbjct: 324 ---------------------PFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMT 362
Query: 205 FVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+LDIL Y++ RG+ + RLDG+ + R
Sbjct: 363 RMLDILQDYLEYRGYSYERLDGSVRGEER 391
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 49/225 (21%)
Query: 9 ARYEDKRKEQATF-EVEQVDQAKR---IISPFMLRRLKKDVLTELPKKTALVIKVPMIPS 64
++ D + QA F +V + +Q KR I+ P MLRRLK DVL +P K+ +++V +
Sbjct: 458 GKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSM 517
Query: 65 QAEKYRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIAD 124
Q + Y+ ++ K N +G R S +++ M LRK NHP Y F
Sbjct: 518 QKKFYKHILTKNFKALNQKGGGRV--CSLLNIMMDLRKCCNHP----YLFPS-------- 563
Query: 125 CLVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLD 184
E+ T +S ++++S L SGKL L
Sbjct: 564 -AAEEAT---------------ISPSGLYEMS---------------SLTKASGKLDLLS 592
Query: 185 EILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQ 229
++L LK + HRVL+FSQ +L++L H+++ G+++ R+DG+ +
Sbjct: 593 KMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIK 637
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 46/203 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKKDV ELP K VI+ M Q + Y + + ++
Sbjct: 635 KVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGI 694
Query: 91 ISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDISWLSDY 150
+ M L+K+ NHP + E+ R I DPT G N Y
Sbjct: 695 KGLQNTVMQLKKICNHP-----FVFEDVERSI------DPT--GFN-------------Y 728
Query: 151 DIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDIL 210
D+ L SGK + LD ILP L ++GHR+L+F Q +++I+
Sbjct: 729 DM--------------------LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIM 768
Query: 211 GHYMDIRGWRHLRLDGATQVSSR 233
Y+ R WR+LRLDG+T+ R
Sbjct: 769 EDYLHYRQWRYLRLDGSTKADDR 791
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 46/208 (22%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME---DFKKTA 80
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E F
Sbjct: 1052 EQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMG 1111
Query: 81 NPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQE--NTLREIADCLVEDPTYKGTNPQ 138
+ SN N ++ M M LRK NHP + ++ + LRE+ D L P
Sbjct: 1112 ATQNSNVPNLLNTM---MELRKCCNHPYLITGAEEKIVSELREVYDPLA---------PD 1159
Query: 139 YILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVL 198
+ L+ LV +GKL LD++LP LK GH+VL
Sbjct: 1160 FHLQ-----------------------------ALVRSAGKLVLLDKLLPRLKAGGHKVL 1190
Query: 199 IFSQFIFVLDILGHYMDIRGWRHLRLDG 226
IFSQ + LDIL Y+ + + + R+DG
Sbjct: 1191 IFSQMVRCLDILEDYLIHKRYLYERIDG 1218
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 48/205 (23%)
Query: 33 ISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLM-EDFKKTANPEGSNRSNEI 91
+ P++LRRLKKDV LP K+ +++V + Q Y+ ++ +++ S +
Sbjct: 585 LQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISL 644
Query: 92 SHMSMFMMLRKMANHPLGLRYYF---QENTLREIADCLVEDPTYKGTNPQYILEDISWLS 148
+++ + L+K +NHP Y F +E+ +++I D KG
Sbjct: 645 --LNIVVELKKASNHP----YLFDGVEESWMQKINSQGRRDEVLKG-------------- 684
Query: 149 DYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLD 208
L++ SGK+ LD++L L+++GHRVLIFSQ + +LD
Sbjct: 685 ------------------------LIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLD 720
Query: 209 ILGHYMDIRGWRHLRLDGATQVSSR 233
ILG Y+ +RG+ H RLDG + R
Sbjct: 721 ILGDYLSLRGYPHQRLDGTVPAAVR 745
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+I++PF+LRRLK DV E+P K +V+ P+ Q Y ++ + AN GS+
Sbjct: 442 QILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVN--RTIANMFGSSEKET 499
Query: 91 I-----------SHMSM-FMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQ 138
I + S+ + + N L Q RE A V P N +
Sbjct: 500 IELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLK 559
Query: 139 YILEDISWLSDYDIHQLSLKHKTLD--CAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
L++I L + L +D ++K+ ++LV SGK LD +LP+LKK GH+
Sbjct: 560 --LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHK 617
Query: 197 VLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
VL+FSQ +LDIL Y +R + RLDG+ S R
Sbjct: 618 VLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 45/204 (22%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPE 83
+Q+ + ++ P MLRRLK DV +P KT L+++V + Q + Y+ ++ + N +
Sbjct: 915 DQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK 974
Query: 84 GSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILED 143
G N++S +++ M L+K NHP Y F + + ++ + +Y G++
Sbjct: 975 GG--GNQVSLLNIMMDLKKCCNHP----YLF---PVAAVEAPVLPNGSYDGSS------- 1018
Query: 144 ISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQF 203
LV SGKL L ++L L+ GHRVLIFSQ
Sbjct: 1019 -----------------------------LVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
Query: 204 IFVLDILGHYMDIRGWRHLRLDGA 227
+LD+L +++ G+++ R+DG
Sbjct: 1050 TKMLDLLEDFLEYEGYKYERIDGG 1073
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV +L K +I+V + Q + YR ++E +F +
Sbjct: 1064 EQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS-- 1121
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+ ++N + ++ M LRK NHP ++ +E L E D TY NP
Sbjct: 1122 KGAGQTNVPNLVNTMMELRKCCNHPYLIKGA-EEKILGEFRD------TY---NPS---- 1167
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
SD+ + ++ +GKL +D++LP +K GH+VLIFSQ
Sbjct: 1168 ----ASDFHLQA------------------MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQ 1205
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ + + + R+DG
Sbjct: 1206 MVRCLDILEDYLIHKRYLYERIDG 1229
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 39/211 (18%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F
Sbjct: 960 EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLT-- 1017
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+++SN + ++ M LRK NHP L +E + E + P
Sbjct: 1018 KGASQSNTPNLLNTMMELRKCCNHPY-LITGAEEKIISEFREATPVVP------------ 1064
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
D+ + +V SGKL +D++LP L+ GH+VLIFSQ
Sbjct: 1065 -----PDFHVQA------------------MVRSSGKLVLIDKLLPKLRAGGHKVLIFSQ 1101
Query: 203 FIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+ LDIL Y+ R + + R+DG + + R
Sbjct: 1102 MVRCLDILEDYLIQRRYLYERIDGRVRGNMR 1132
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 51/207 (24%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPE 83
+Q+++ ++ P MLRRLK DVLT +P K+ L+++V + Q + Y+ ++ T N +
Sbjct: 817 DQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNIL-----TRNFD 871
Query: 84 GSNRSN---EISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
N N ++S M++ M L+K NHP Y F + L + ++ Y+GT
Sbjct: 872 ALNVKNGGTQMSLMNVLMELKKCCNHP----YLFVKAELEAPKE---KNGMYEGTA---- 920
Query: 141 LEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
L+ SGK L ++L LK GHRVLIF
Sbjct: 921 --------------------------------LIKNSGKFVLLQKMLRKLKDGGHRVLIF 948
Query: 201 SQFIFVLDILGHYMDIRGWRHLRLDGA 227
SQ +LDI+ + G+R+ R+DG+
Sbjct: 949 SQMTRMLDIMEDLCEYEGYRYERIDGS 975
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV +L K +I+V + Q + YR ++E +F +
Sbjct: 1065 EQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS-- 1122
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+ ++N + ++ M LRK NHP ++ +E L E D TY NP
Sbjct: 1123 KGAGQTNVPNLVNTMMELRKCCNHPYLIKGA-EEKILGEFRD------TY---NPA---- 1168
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
SD+ + ++ +GKL +D++LP +K GH+VLIFSQ
Sbjct: 1169 ----ASDFHLQA------------------MIQSAGKLVLIDKLLPKMKAGGHKVLIFSQ 1206
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ + + + R+DG
Sbjct: 1207 MVRCLDILEDYLIHKRYLYERIDG 1230
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKK+V +LP+K VIK M Q YR + K +GS + +
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQA--KGVLLTDGSEKDKK 1027
Query: 91 ISH-----MSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDIS 145
M+ M LRK+ NHP Y FQ I + E + G I++ +
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHP----YMFQH-----IEESFSEHLGFTGG----IVQGL- 1073
Query: 146 WLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIF 205
DL SGK + LD ILP L+ H+VL+F Q
Sbjct: 1074 --------------------------DLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107
Query: 206 VLDILGHYMDIRGWRHLRLDGATQVSSR 233
++ I+ Y RG+++LRLDG T+ R
Sbjct: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKK+V +LP+K VIK M Q YR + K +GS + +
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQA--KGVLLTDGSEKDKK 1027
Query: 91 ISH-----MSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDIS 145
M+ M LRK+ NHP Y FQ I + E + G I++ +
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHP----YMFQH-----IEESFSEHLGFTGG----IVQGL- 1073
Query: 146 WLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIF 205
DL SGK + LD ILP L+ H+VL+F Q
Sbjct: 1074 --------------------------DLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107
Query: 206 VLDILGHYMDIRGWRHLRLDGATQVSSR 233
++ I+ Y RG+++LRLDG T+ R
Sbjct: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKK+V +LP+K VIK M Q YR + K +GS + +
Sbjct: 962 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQA--KGVLLTDGSEKDKK 1019
Query: 91 ISH-----MSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDIS 145
M+ M LRK+ NHP Y FQ I + E + G I++ +
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHP----YMFQH-----IEESFSEHLGFTGG----IVQGL- 1065
Query: 146 WLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIF 205
DL SGK + LD ILP L+ H+VL+F Q
Sbjct: 1066 --------------------------DLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1099
Query: 206 VLDILGHYMDIRGWRHLRLDGATQVSSR 233
++ I+ Y RG+++LRLDG T+ R
Sbjct: 1100 LMTIMEDYFAYRGFKYLRLDGTTKAEDR 1127
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKK+V +LP+K VIK M Q YR + K +GS + +
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQA--KGVLLTDGSEKDKK 1027
Query: 91 ISH-----MSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDIS 145
M+ M LRK+ NHP Y FQ I + E + G I++ +
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHP----YMFQH-----IEESFSEHLGFTGG----IVQGL- 1073
Query: 146 WLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIF 205
DL SGK + LD ILP L+ H+VL+F Q
Sbjct: 1074 --------------------------DLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107
Query: 206 VLDILGHYMDIRGWRHLRLDGATQVSSR 233
++ I+ Y RG+++LRLDG T+ R
Sbjct: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F +
Sbjct: 1016 EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS-- 1073
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+ +N + ++ M LRK NHP L +E L E + +I+
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPY-LINGAEEKILTEFREAC------------HIIP 1120
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
+D H ++ V +GKL +D++LP LK GH+VLIFSQ
Sbjct: 1121 -------HDFHLQAM----------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1157
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1158 MVRCLDILEDYLIQRRYLYERIDG 1181
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK DV L K +I+V + Q + YR ++E +F
Sbjct: 666 EQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLT-- 723
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+N+ N + ++ M LRK NHP L+ K ILE
Sbjct: 724 KGANQHNMPNLINTMMELRKCCNHPY-----------------LINGAEEK------ILE 760
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
D D L+ ++ +GKL +D++LP L GH+VLIFSQ
Sbjct: 761 DFRKTHSPDAPDFQLQA-------------MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQ 807
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 808 MVRCLDILEDYLIQRRYTYERIDG 831
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 49/210 (23%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPE 83
EQ+ + ++++P +LRR+KKDV+ ++P K L+++V + Q E Y+ + + +
Sbjct: 490 EQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKK 549
Query: 84 GSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILED 143
G +IS ++ M LRK+ HP Y+LE
Sbjct: 550 GGA---QISLNNIMMELRKVCCHP-------------------------------YMLEG 575
Query: 144 ISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQF 203
+ + IH + K L+ GKL+ LD+++ LK+ GHRVLI++QF
Sbjct: 576 VEPV----IHDANEAFK-----------QLLESCGKLQLLDKMMVKLKEQGHRVLIYTQF 620
Query: 204 IFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+LD+L Y + W++ R+DG + R
Sbjct: 621 QHMLDLLEDYCTHKKWQYERIDGKVGGAER 650
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F +
Sbjct: 1018 EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS-- 1075
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+ +N + ++ M LRK NHP L +E L E + +I+
Sbjct: 1076 KGAGHTNMPNLLNTMMELRKCCNHPY-LINGAEEKILMEFREAC------------HIIP 1122
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
D H ++ V +GKL +D++LP LK GH+VLIFSQ
Sbjct: 1123 Q-------DFHLQAM----------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1159
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1160 MVRCLDILEDYLIQRRYLYERIDG 1183
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 39/204 (19%)
Query: 24 EQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLME-DFKKTANP 82
EQV + + I+ P MLRRLK+DV L K +I+V + Q + YR ++E +F +
Sbjct: 1016 EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS-- 1073
Query: 83 EGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILE 142
+G+ +N + ++ M LRK NHP L +E L E + +I+
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPY-LINGAEEKILMEFREAC------------HIIP 1120
Query: 143 DISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQ 202
D H ++ V +GKL +D++LP LK GH+VLIFSQ
Sbjct: 1121 Q-------DFHLQAM----------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1157
Query: 203 FIFVLDILGHYMDIRGWRHLRLDG 226
+ LDIL Y+ R + + R+DG
Sbjct: 1158 MVRCLDILEDYLIQRRYLYERIDG 1181
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 91/204 (44%), Gaps = 52/204 (25%)
Query: 26 VDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY-RGLMEDFKKTANPEG 84
V++ ++ PF+LRR+K DV LP K + I V + Q E Y R LM+D N G
Sbjct: 381 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID-ILNSAG 439
Query: 85 SNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDI 144
+ +++ +++ M LRK NHP Y F D P Y
Sbjct: 440 --KMDKMRLLNILMQLRKCCNHP----YLF---------DGAEPGPPYTT---------- 474
Query: 145 SWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFI 204
D+H LV SGK+ LD++LP LK+ G RVLIFSQ
Sbjct: 475 ------DMH-------------------LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMT 509
Query: 205 FVLDILGHYMDIRGWRHLRLDGAT 228
VLDIL Y R + + RLDG T
Sbjct: 510 RVLDILEDYCMWRNYEYCRLDGQT 533
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 91/204 (44%), Gaps = 52/204 (25%)
Query: 26 VDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKY-RGLMEDFKKTANPEG 84
V++ ++ PF+LRR+K DV LP K + I V + Q E Y R LM+D N G
Sbjct: 380 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID-ILNSAG 438
Query: 85 SNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDI 144
+ +++ +++ M LRK NHP Y F D P Y
Sbjct: 439 --KMDKMRLLNILMQLRKCCNHP----YLF---------DGAEPGPPYTT---------- 473
Query: 145 SWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFI 204
D+H LV SGK+ LD++LP LK+ G RVLIFSQ
Sbjct: 474 ------DMH-------------------LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMT 508
Query: 205 FVLDILGHYMDIRGWRHLRLDGAT 228
VLDIL Y R + + RLDG T
Sbjct: 509 RVLDILEDYCMWRNYEYCRLDGQT 532
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 51/229 (22%)
Query: 8 DARYEDKRKEQATFEVEQ---VDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPS 64
D+ D+ EQ E +Q + Q +++PF+LRR+K DV L K + V M
Sbjct: 365 DSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDM 424
Query: 65 QAEKYRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIAD 124
Q + Y+ L+E N R + +++ M LRK NHP Y F+
Sbjct: 425 QIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHP----YLFE--------- 471
Query: 125 CLVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLD 184
G P Y + L+ SGK+ LD
Sbjct: 472 ---------GAEP--------------------------GPPYTTDEHLIFNSGKMIILD 496
Query: 185 EILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
++L LK+ G RVLIFSQ +LDIL Y R + + R+DG+T R
Sbjct: 497 KLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEER 545
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 63/212 (29%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPM------IPSQAEKYRGLM---EDFKKTAN 81
+++ PF+LRRLKKDV ELP K V+K M + Q KYR L ++ KK
Sbjct: 985 KVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVG 1044
Query: 82 PEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYIL 141
G N N+I M L+K+ NHP + F+E VED
Sbjct: 1045 LRGFN--NQI------MQLKKICNHP----FVFEE----------VED------------ 1070
Query: 142 EDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFS 201
Q++ +T DD+ +GK + LD ILP LK GHRVLIF
Sbjct: 1071 ------------QINPTRET--------NDDIWRVAGKFELLDRILPKLKATGHRVLIFF 1110
Query: 202 QFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
Q ++DI+ ++ ++LRLDG T+ R
Sbjct: 1111 QMTQIMDIMEDFLRYINIKYLRLDGHTKSDER 1142
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDF---------KKTAN 81
+I++PF+LRRLK DV E+P K +V+ P+ Q Y ++ K+T
Sbjct: 425 QILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVE 484
Query: 82 PEGSNRSNEISHMSM-FMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
+ R S S+ + L + + L Q RE +VE +
Sbjct: 485 LSPTGRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRE--RTVVEGNIPIESEVNLK 542
Query: 141 LEDISWLSDYDIHQLSLKHKTLD--CAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVL 198
L +I L + + +D ++K+ ++LV SGK LD +LP+LKK GH+VL
Sbjct: 543 LRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVL 602
Query: 199 IFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+FSQ +LDIL Y +R + RLDG+ S R
Sbjct: 603 VFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSER 637
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 47/208 (22%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNE 90
+++ PF+LRRLKK+V ++LP+K VIK M Q YR + K +GS + +
Sbjct: 940 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQA--KGILLTDGSEKDKK 997
Query: 91 I-----SHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDIS 145
+ M+ M LRK+ NHP Y FQ I + E
Sbjct: 998 GKGGAKTLMNTIMQLRKICNHP----YMFQH-----IEESFAE----------------- 1031
Query: 146 WLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIF 205
L + ++ A +L SGK + LD ILP L+ HRVL+F Q
Sbjct: 1032 --------HLGYSNGVINGA------ELYRASGKFELLDRILPKLRATNHRVLLFCQMTS 1077
Query: 206 VLDILGHYMDIRGWRHLRLDGATQVSSR 233
++ I+ Y R + +LRLDG T+ R
Sbjct: 1078 LMTIMEDYFAFRNFLYLRLDGTTKSEDR 1105
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 43/206 (20%)
Query: 31 RIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMED---FKKTANPEGSNR 87
+++ PF+LRRLKK+V ++LP+K VIK M Q YR + + + +
Sbjct: 945 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 1004
Query: 88 SNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDISWL 147
+ M+ M LRK+ NHP Y FQ I + E
Sbjct: 1005 GGAKTLMNTIMQLRKICNHP----YMFQH-----IEESFAE------------------- 1036
Query: 148 SDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVL 207
L + ++ A +L SGK + LD ILP L+ HRVL+F Q ++
Sbjct: 1037 ------HLGYSNGVINGA------ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLM 1084
Query: 208 DILGHYMDIRGWRHLRLDGATQVSSR 233
I+ Y R + +LRLDG T+ R
Sbjct: 1085 TIMEDYFAFRNFLYLRLDGTTKSEDR 1110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,024,977
Number of Sequences: 539616
Number of extensions: 3759289
Number of successful extensions: 11466
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 11013
Number of HSP's gapped (non-prelim): 373
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)