RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2047
(233 letters)
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double
chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces
cerevisiae}
Length = 800
Score = 143 bits (363), Expect = 1e-39
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 2 DSDSEDDARYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPM 61
D E D +D+ +E E + R I PF+LRRLKKDV LP KT +++V +
Sbjct: 426 TIDQEIDFENQDEEQE------EYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVEL 479
Query: 62 IPSQAEKYRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLRE 121
Q E Y+ ++ K + + S +++ L+K +NHP Y F
Sbjct: 480 SDVQTEYYKNILT--KNYSALTAGAKGGHFSLLNIMNELKKASNHP----YLFDN----- 528
Query: 122 IADCLVEDPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLK 181
E+ + + + L++ SGK+
Sbjct: 529 -----AEERVLQKFGDGKMTRENVL------------------------RGLIMSSGKMV 559
Query: 182 KLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
LD++L LKK+GHRVLIFSQ + +LDILG Y+ I+G RLDG + R
Sbjct: 560 LLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQR 611
>1z3i_X Similar to RAD54-like; recombination ATPase helicase,
recombination-DNA binding COM; 3.00A {Danio rerio} SCOP:
c.37.1.19 c.37.1.19
Length = 644
Score = 131 bits (331), Expect = 2e-35
Identities = 41/226 (18%), Positives = 75/226 (33%), Gaps = 38/226 (16%)
Query: 9 ARYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEK 68
R D + +++ + I++ ++RR + LP K V+ + P Q E
Sbjct: 267 GRDADASDKDRAAGEQKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKEL 326
Query: 69 YRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVE 128
Y+ ++ + +S +S L+K+ NHP L+
Sbjct: 327 YKLFLK--QAKPVESLQTGKISVSSLSSITSLKKLCNHP-----------------ALIY 367
Query: 129 DPTYKGTNPQYILEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILP 188
+ G D+ Y SGK+ LD IL
Sbjct: 368 EKCLTGEEGFDGALDLF------------------PQNYSTKAVEPQLSGKMLVLDYILA 409
Query: 189 DLKKN-GHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+ +V++ S + LD+ R + ++RLDG + R
Sbjct: 410 MTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKR 455
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex,
hydrolase/DNA complex complex; 3.00A {Sulfolobus
solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Length = 500
Score = 106 bits (266), Expect = 9e-27
Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 63/214 (29%)
Query: 24 EQVDQAKRIISPFMLRRLKKD--VLTELPKKTALVIKVPMIPSQAEKYRGLMED-FKKTA 80
++ K IISPF+LRR K D ++ +LP K + + P QA Y+ +E+ F
Sbjct: 227 MAKEELKAIISPFILRRTKYDKAIINDLPDKIETNVYCNLTPEQAAMYKAEVENLFNNID 286
Query: 81 NPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
+ G R I +S + L+++ +H P +
Sbjct: 287 SVTGIKRKGMI--LSTLLKLKQIVDH------------------------------PALL 314
Query: 141 LEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
+ V SGK+ + EI+ + G ++ IF
Sbjct: 315 KGG---------------------------EQSVRRSGKMIRTMEIIEEALDEGDKIAIF 347
Query: 201 SQFIFVLDILGHYMDIR-GWRHLRLDGATQVSSR 233
+QF+ + I+ + ++ L G R
Sbjct: 348 TQFVDMGKIIRNIIEKELNTEVPFLYGELSKKER 381
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination,
hydrolase-recombination complex; 2.00A {Sulfolobus
solfataricus} SCOP: c.37.1.19
Length = 271
Score = 100 bits (252), Expect = 6e-26
Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 62/208 (29%)
Query: 28 QAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMED-FKKTANPEGSN 86
S ++ R + ++LP K + + P QA Y+ +E+ F + G
Sbjct: 5 HHHHHHSSGLVPR-GSHMASDLPDKIETNVYCNLTPEQAAMYKAEVENLFNNIDSVTGIK 63
Query: 87 RSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDISW 146
R I +S + L+++ +H P +
Sbjct: 64 RKGMI--LSTLLKLKQIVDH------------------------------PALLKGG--- 88
Query: 147 LSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFV 206
+ V SGK+ + EI+ + G ++ IF+QF+ +
Sbjct: 89 ------------------------EQSVRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDM 124
Query: 207 LDILGHYMDIR-GWRHLRLDGATQVSSR 233
I+ + ++ L G R
Sbjct: 125 GKIIRNIIEKELNTEVPFLYGELSKKER 152
>3hgt_A HDA1 complex subunit 3; RECA-like domain, SWI2/SNF2 helical domain,
chromatin regulator, coiled coil, nucleus, repressor,
transcription; 2.20A {Saccharomyces cerevisiae} PDB:
3hgq_A
Length = 328
Score = 82.7 bits (204), Expect = 8e-19
Identities = 27/196 (13%), Positives = 49/196 (25%), Gaps = 50/196 (25%)
Query: 43 KDVLTELPKKTALVIKVPMIPSQAEKYRGLME----DFKKTANPEGSNRSNEISHMS-MF 97
+ + M Q E ++ D + + M M
Sbjct: 14 TTLGISGNTSGDYWLPTTMSLYQKELTDQIVSLHYSDILRYFETSHYKEDVILESMKTMC 73
Query: 98 MMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDISWLSDYDIHQLSL 157
+ +A HP Y+L D Y L
Sbjct: 74 LNGSLVATHP-------------------------------YLLID-----HYMPKSLIT 97
Query: 158 KHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIR 217
+ P L SGK L +++ +++ I + +D+L +
Sbjct: 98 RDV---------PAHLAENSGKFSVLRDLINLVQEYETETAIVCRPGRTMDLLEALLLGN 148
Query: 218 GWRHLRLDGATQVSSR 233
R DG + S+
Sbjct: 149 KVHIKRYDGHSIKSAA 164
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 43.5 bits (102), Expect = 3e-05
Identities = 40/233 (17%), Positives = 68/233 (29%), Gaps = 85/233 (36%)
Query: 1 MDSDSEDDARYEDKR--KE------QATFEVEQVD-------Q-AKRIISPFMLRRLKKD 44
M ++ D + + ++ KE TF E+ Q A ++ LK
Sbjct: 1691 MIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSK 1750
Query: 45 VLTELPKK---------TALVIKVPMIPSQAE-----------KYRGLMEDFKKTANPEG 84
L AL S A+ YRG+ + A P
Sbjct: 1751 GLIPADATFAGHSLGEYAALA-------SLADVMSIESLVEVVFYRGM---TMQVAVPRD 1800
Query: 85 S-NRSNEISHMSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILED 143
RSN M +A +P + F + L+ + + + G +++E
Sbjct: 1801 ELGRSN----YGM------IAINPGRVAASFSQEALQYVVERV-------GKRTGWLVE- 1842
Query: 144 ISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHR 196
I Y V + V +G L+ LD + L +
Sbjct: 1843 --------I------------VNYNVENQQYVAAGDLRALDTVTNVLNFIKLQ 1875
Score = 33.5 bits (76), Expect = 0.068
Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 97/247 (39%)
Query: 36 FMLRRLKKDVLTELPKKTALVIKVPMIPSQAE---KYRGLMEDFKKTANPEGSN------ 86
F+ +L++ LP+ T + AE K+ G + + G
Sbjct: 28 FIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSS-LVEPSKVGQFDQVLNL 86
Query: 87 ----------RSNEISHMSMFMMLRKMANHPLG-----LRYYFQENTLREIADCLVEDPT 131
N+I H ++ L + + L ++ Y A + + P
Sbjct: 87 CLTEFENCYLEGNDI-H-ALAAKLLQENDTTLVKTKELIKNYIT-------ARIMAKRPF 137
Query: 132 YK------------------------GTNPQYILEDISWLSD-YDIHQLSLKHKTLDCAK 166
K G Y E L D Y + + +
Sbjct: 138 DKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEE----LRDLYQTYHVLVG-------- 185
Query: 167 YKVPDDLVVESGK-LKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLD 225
DL+ S + L +L D +K + ++I W L+
Sbjct: 186 -----DLIKFSAETLSELIRTTLDAEK----------------VFTQGLNILEW----LE 220
Query: 226 GATQVSS 232
+
Sbjct: 221 NPSNTPD 227
Score = 32.7 bits (74), Expect = 0.10
Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 70/154 (45%)
Query: 15 RKEQATFEVEQVDQAKRIISPFMLRRLKKDVLTE-LPKKTALVIKVP-----MIPSQAEK 68
RK +A ++Q RI PF R+LK LP + P ++P+
Sbjct: 394 RKAKAPSGLDQ----SRI--PFSERKLK--FSNRFLP------VASPFHSHLLVPASDL- 438
Query: 69 YRGLMEDFKK----------------TANPEGSNRSNEISHMSMFMMLRKMANHPLGLRY 112
+ +D K T + GS+ LR ++
Sbjct: 439 ---INKDLVKNNVSFNAKDIQIPVYDTFD--GSD-------------LRVLSG------- 473
Query: 113 YFQENTLREIADCLVEDPTY----KGTNPQYILE 142
+ I DC++ P +IL+
Sbjct: 474 ----SISERIVDCIIRLPVKWETTTQFKATHILD 503
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 43.3 bits (101), Expect = 4e-05
Identities = 35/235 (14%), Positives = 62/235 (26%), Gaps = 70/235 (29%)
Query: 21 FEVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTA 80
+ I L D + L K L + +P + T
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPREV-----------LTT 325
Query: 81 NPEGSNRSNEISHMSMF-MMLRKMANHPLGLRYYFQENTLREIADCL-VEDPT-----Y- 132
NP +S+ +R ++ + I L V +P +
Sbjct: 326 NPR---------RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376
Query: 133 ------KGTN-PQYILEDISW--LSDYDI-------HQLSLKHKTLDCAKYKVPDDLVVE 176
+ P +L + W + D+ H+ SL K + +P +
Sbjct: 377 RLSVFPPSAHIPTILLS-LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL-- 433
Query: 177 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRH-----LRLDG 226
+LK E L HR ++ HY + + LD
Sbjct: 434 --ELKVKLENEYAL----HRSIV-----------DHYNIPKTFDSDDLIPPYLDQ 471
Score = 33.3 bits (75), Expect = 0.064
Identities = 36/234 (15%), Positives = 68/234 (29%), Gaps = 82/234 (35%)
Query: 10 RYEDKRKEQATFE-VEQVDQAKR---IISPFMLRRLK-----KDVLTELPK--------- 51
+ E ++ T +EQ D+ + + + + RL+ + L EL
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV 158
Query: 52 ----KTALVIKVPMIPSQAEKYRGLMEDFKKTANPEGS----NRSNEISHMSMFMMLRKM 103
KT + + V +K + N N S ++ ML
Sbjct: 159 LGSGKTWVALDV-------------CLSYKVQCKMDFKIFWLNLKNCNSPETVLEML--- 202
Query: 104 ANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYILEDI-SWLSDYDIHQLSLKHKTL 162
L D + +N + + I + L LK K
Sbjct: 203 -------------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL------LKSK-- 241
Query: 163 DCAKYK----VPDDLVVESGK-LKKLDEILPDLKKNGHRVLIFSQFIFVLDILG 211
Y+ V + V++ K + ++L+ ++F V D L
Sbjct: 242 ---PYENCLLVLLN--VQNAKAWNAFN--------LSCKILLTTRFKQVTDFLS 282
Score = 29.8 bits (66), Expect = 0.90
Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 46/273 (16%)
Query: 1 MDSD-SEDDARYED-----KRKEQATFEVEQV-DQAKRIIS----------PFMLRRLKK 43
MD + E +Y+D + F+ + V D K I+S + +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 44 DVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTAN-PEGSNRSNEISHMSMFMMLRK 102
+ L K +++ + Y+ LM K P R ++ +
Sbjct: 67 -LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 103 MANHP-------LGLRYYFQENTLREIAD------------CLVEDPTYKGTNPQYILED 143
A + L LR E LR + + D Q ++
Sbjct: 126 FAKYNVSRLQPYLKLRQALLE--LRPAKNVLIDGVLGSGKTWVALD-VCLSYKVQCKMDF 182
Query: 144 -ISWLS--DYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
I WL+ + + + L+ Y++ + S + + ++ R+L
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLL--YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 201 SQFIFVLDILGHYMDIRGWRHLRLDGATQVSSR 233
+ L +L + + + W L +++R
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription
factor, RNA polymerase recycling, activator,
ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Length = 968
Score = 38.9 bits (90), Expect = 0.001
Identities = 29/214 (13%), Positives = 56/214 (26%), Gaps = 18/214 (8%)
Query: 22 EVEQVDQAKRIISPFMLRRLKKDVLTELPKKTALVIKVPMIPSQAEKYRGLMEDFKKTAN 81
+ A + +L D L L + + L++ +
Sbjct: 346 QKNYCPVADAVAMLLAGNKLSNDELNMLGEMIG-----------EQDIEPLLQAANSDSE 394
Query: 82 PEGSNRSNEISH-MSMFMMLRKMANHPLGLRYYFQENTLREIADCLVEDPTYKGTNPQYI 140
S R +S M R + + F + RE+ + PT T +
Sbjct: 395 DAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPK---RELHTIKLPLPTQYQTAIKVS 451
Query: 141 LEDISWLSDYDIHQLSLKHKTLDCAKYKVPDDLVVESGKLKKLDEILPDLKKNGHRVLIF 200
+ S D + L + + +++ L L + +VL+
Sbjct: 452 GIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHR--SQKVLVI 509
Query: 201 SQFIFVLDILGHYMDIR-GWRHLRLDGATQVSSR 233
L + R G R + R
Sbjct: 510 CAKAATALQLEQVLREREGIRAAVFHEGMSIIER 543
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 28.6 bits (63), Expect = 1.2
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 6 EDDARYEDKRKEQATFEVEQVDQAKRIISPFMLRRLKK 43
E R ++ E E ++AK+ + + R+ ++
Sbjct: 93 EQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQ 130
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 27.2 bits (59), Expect = 3.4
Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 4/18 (22%)
Query: 176 ESGKLKKLDEIL----PD 189
E LKKL L D
Sbjct: 18 EKQALKKLQASLKLYADD 35
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics,
structural genomic consortium, SGC, hydrolase; 2.60A
{Homo sapiens}
Length = 191
Score = 27.2 bits (61), Expect = 4.2
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 174 VVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWR 220
V E K+ L E L +K VLIF++ +D + Y+ ++G
Sbjct: 37 VKEEAKMVYLLECL---QKTPPPVLIFAEKKADVDAIHEYLLLKGVE 80
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library,
clone:A230045M11...; FTHFSDC1, structural genomics,
NPPSFA; NMR {Mus musculus}
Length = 71
Score = 25.4 bits (56), Expect = 5.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 30 KRIISPFMLRRLKK 43
R S L RLKK
Sbjct: 26 VREFSEIQLSRLKK 39
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase;
HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2
c.47.1.10 d.16.1.2 PDB: 1foh_A*
Length = 665
Score = 26.5 bits (58), Expect = 8.7
Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 20/112 (17%)
Query: 57 IKVPMIPSQAEKYRGLMEDFKKTANPEGSNRSNEISHMSMFMMLRKMANHPLGLRYYFQE 116
+ MI Q + G+++ + P+ +R S S +M+ N+ +R+Y Q
Sbjct: 236 LGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENN--LVRFYVQL 293
Query: 117 NTLREIADCLVEDPTYKGTNPQYILE--------------DISWLSDYDIHQ 154
E P+ ++ + W + Y I Q
Sbjct: 294 QARAEKG----GRVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTAYHIGQ 341
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein;
HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19
c.37.1.19 PDB: 2fzl_A*
Length = 472
Score = 26.3 bits (58), Expect = 9.8
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 177 SGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRG 218
K++KL EIL + +++IF++ ++ + I
Sbjct: 334 KNKIRKLREILERHR--KDKIIIFTRHNELVYRISKVFLIPA 373
>4f0q_A Restriction endonuclease; cytosine methylation-dependent
endonuclease, hydrolase; 2.05A {Mycobacterium SP} PDB:
4f0p_A
Length = 456
Score = 26.5 bits (57), Expect = 10.0
Identities = 6/53 (11%), Positives = 17/53 (32%)
Query: 174 VVESGKLKKLDEILPDLKKNGHRVLIFSQFIFVLDILGHYMDIRGWRHLRLDG 226
+ +++L+ ++ + G S + V+ W R +
Sbjct: 178 FCGAAIIERLEHVVQRDPETGRSFPNLSLDLAVVSGGEIDGVDFRWIDDRRNA 230
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.136 0.395
Gapped
Lambda K H
0.267 0.0440 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,695,062
Number of extensions: 224640
Number of successful extensions: 627
Number of sequences better than 10.0: 1
Number of HSP's gapped: 615
Number of HSP's successfully gapped: 35
Length of query: 233
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 143
Effective length of database: 4,188,903
Effective search space: 599013129
Effective search space used: 599013129
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.1 bits)