BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2054
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M7E1|CLVS1_XENLA Clavesin-1 OS=Xenopus laevis GN=clvs1 PE=2 SV=1
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S S ++A +L S+ RL I G + P R +H VNQP+Y +ALY I
Sbjct: 162 IDWSNFSFKQASKLTPSIL-------RLAIEGLQDSFPARFGGVHFVNQPWYIHALYTII 214
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK K R+R L G
Sbjct: 215 KPFLKDKTRKRIFLHG 230
>sp|Q5RCA6|CLVS1_PONAB Clavesin-1 OS=Pongo abelii GN=CLVS1 PE=2 SV=1
Length = 354
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S S ++A +L S+ ++A I G + P R +H VNQP+Y +ALY +
Sbjct: 184 IDWSNFSFKQASKLTPSILKLA-------IEGLQDSFPARFGGVHFVNQPWYIHALYTLI 236
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK K R+R L G
Sbjct: 237 KPFLKDKTRKRIFLHG 252
>sp|Q8IUQ0|CLVS1_HUMAN Clavesin-1 OS=Homo sapiens GN=CLVS1 PE=1 SV=1
Length = 354
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S S ++A +L S+ ++A I G + P R +H VNQP+Y +ALY +
Sbjct: 184 IDWSNFSFKQASKLTPSILKLA-------IEGLQDSFPARFGGVHFVNQPWYIHALYTLI 236
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK K R+R L G
Sbjct: 237 KPFLKDKTRKRIFLHG 252
>sp|Q9D4C9|CLVS1_MOUSE Clavesin-1 OS=Mus musculus GN=Clvs1 PE=2 SV=1
Length = 354
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S S ++A +L S+ ++A I G + P R +H VNQP+Y +ALY +
Sbjct: 184 IDWSNFSFKQASKLTPSILKLA-------IEGLQDSFPARFGGVHFVNQPWYIHALYTLI 236
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK K R+R L G
Sbjct: 237 KPFLKDKTRKRIFLHG 252
>sp|A6JUQ6|CLVS2_RAT Clavesin-2 OS=Rattus norvegicus GN=Clvs2 PE=1 SV=1
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S + ++A +L S+ RL I G + P R IH VNQP+Y +ALY +
Sbjct: 162 IDWSNFTFKQASKLTPSML-------RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214
Query: 60 KPFLKQKLRRRWCLDG 75
+PFLK+K R+R L G
Sbjct: 215 RPFLKEKTRKRIFLHG 230
>sp|A6JFQ6|CLVS1_RAT Clavesin-1 OS=Rattus norvegicus GN=Clvs1 PE=1 SV=1
Length = 354
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S S ++A +L S+ ++A I G + P R +H VNQP+Y +ALY +
Sbjct: 184 IDWSNFSFKQASKLTPSILKLA-------IEGLQDSFPARFGGVHFVNQPWYIHALYTLI 236
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK K R+R L G
Sbjct: 237 KPFLKDKTRKRIFLHG 252
>sp|Q95KF7|CLVS2_MACFA Clavesin-2 OS=Macaca fascicularis GN=CLVS2 PE=2 SV=2
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S + ++A +L S+ RL I G + P R IH VNQP+Y +ALY +
Sbjct: 162 IDWSNFTFKQASKLTPSML-------RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214
Query: 60 KPFLKQKLRRRWCLDG 75
+PFLK+K R+R L G
Sbjct: 215 RPFLKEKTRKRIFLHG 230
>sp|Q5SYC1|CLVS2_HUMAN Clavesin-2 OS=Homo sapiens GN=CLVS2 PE=2 SV=1
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S + ++A +L S+ RL I G + P R IH VNQP+Y +ALY +
Sbjct: 162 IDWSNFTFKQASKLTPSML-------RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214
Query: 60 KPFLKQKLRRRWCLDG 75
+PFLK+K R+R L G
Sbjct: 215 RPFLKEKTRKRIFLHG 230
>sp|Q8BG92|CLVS2_MOUSE Clavesin-2 OS=Mus musculus GN=Clvs2 PE=2 SV=1
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S + ++A +L ++ RL I G + P R IH VNQP+Y +ALY +
Sbjct: 162 IDWSNFTFKQASKLTPNML-------RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214
Query: 60 KPFLKQKLRRRWCLDG 75
+PFLK+K R+R L G
Sbjct: 215 RPFLKEKTRKRIFLHG 230
>sp|Q5SPP0|CLVS2_DANRE Clavesin-2 OS=Danio rerio GN=clvs2 PE=2 SV=1
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISG-AEKIPLRVKAIHIVNQPFYFNALYAIF 59
+D+S + ++A +L S+ RL I G + P R IH VNQP+Y +ALY +
Sbjct: 162 IDWSNFTFKQASKLTPSML-------RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214
Query: 60 KPFLKQKLRRRWCLDG 75
+PFLK K R+R + G
Sbjct: 215 RPFLKDKTRKRIFMHG 230
>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal
PE=2 SV=3
Length = 343
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 2 DFSKISLEEAFQLGTSVFE--IALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIF 59
D+ +SL +A G + + I +L + P+R+KA+HIVN+P F ++AI
Sbjct: 189 DYKGVSLSKASHFGPFIAKKVIGILQ--------DGFPIRIKAVHIVNEPRIFKGIFAII 240
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK+K+ R+ L G
Sbjct: 241 KPFLKEKIANRFFLHG 256
>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL
PE=2 SV=2
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 2 DFSKISLEEAFQLGTSVFE--IALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIF 59
D+ +SL +A G + + I +L + P+R+KA+H+VN+P F ++AI
Sbjct: 188 DYKGVSLSKASHFGPFIAKKVIGILQ--------DGFPIRIKAVHVVNEPRIFKGIFAII 239
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK+K+ R+ L G
Sbjct: 240 KPFLKEKIANRFFLHG 255
>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL
PE=2 SV=1
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 2 DFSKISLEEAFQLGTSVFE--IALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIF 59
D+ +SL +A G + + I +L + P+R+KA+H+VN+P F ++AI
Sbjct: 188 DYKGVSLSKASHFGPFIAKKVIGILQ--------DGFPIRIKAVHVVNEPRIFKGIFAII 239
Query: 60 KPFLKQKLRRRWCLDG 75
KPFLK+K+ R+ L G
Sbjct: 240 KPFLKEKIANRFFLHG 255
>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1
SV=1
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 2 DFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFKP 61
D + AFQ+ SV + ++ + PL+V+ IH++N+P F+A++++ KP
Sbjct: 159 DLEGWQISHAFQITPSVAK------KIAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 62 FLKQKLRRRWCLDG 75
FL +K++ R L G
Sbjct: 213 FLTEKIKGRIHLHG 226
>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 2 DFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFKP 61
D + AFQ+ SV + ++ + PL+V+ IH++N+P F+A++++ KP
Sbjct: 159 DLEGWQVSHAFQITPSVAK------KIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 62 FLKQKLRRRWCLDG 75
FL +K++ R L G
Sbjct: 213 FLTEKIKDRIHLHG 226
>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 2 DFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFKP 61
D AFQ+ SV + ++ + PL+V+ IH++N+P F+A++++ KP
Sbjct: 159 DLEGWQFSHAFQITPSVAK------KIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 62 FLKQKLRRRWCLDG 75
FL +K++ R + G
Sbjct: 213 FLTEKIKERIHMHG 226
>sp|Q9Z275|RLBP1_MOUSE Retinaldehyde-binding protein 1 OS=Mus musculus GN=Rlbp1 PE=2 SV=3
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 34 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRWCLDG 75
+ P R KAIH ++QP+YF Y + KPFLK KL +R + G
Sbjct: 229 DSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHG 270
>sp|P12271|RLBP1_HUMAN Retinaldehyde-binding protein 1 OS=Homo sapiens GN=RLBP1 PE=1 SV=2
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 2 DFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFKP 61
+F ++++A L TS ++ + LQ S P R KAIH ++QP+YF Y + KP
Sbjct: 203 NFKGFTMQQAASLRTS--DLRKMVDMLQDS----FPARFKAIHFIHQPWYFTTTYNVVKP 256
Query: 62 FLKQKLRRRWCLDG 75
FLK KL R + G
Sbjct: 257 FLKSKLLERVFVHG 270
>sp|P10123|RLBP1_BOVIN Retinaldehyde-binding protein 1 OS=Bos taurus GN=RLBP1 PE=1 SV=4
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 34 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRWCLDG 75
+ P R KAIH + QP+YF Y + KPFLK KL +R + G
Sbjct: 229 DSFPARFKAIHFIYQPWYFTTTYNVVKPFLKSKLLQRVFVHG 270
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SEC14 PE=2 SV=1
Length = 301
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
+D S IS+ A+ + V E + + G + P R+ +++N PF F+ + +FK
Sbjct: 177 LDLSGISVTSAYNVIGYVREASKI-------GQDYYPERMGKFYLINAPFGFSTAFKLFK 229
Query: 61 PFL 63
PFL
Sbjct: 230 PFL 232
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC14 PE=1 SV=3
Length = 304
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
MD IS+ A+ + + V E + + P R+ +I+N PF F+ + +FK
Sbjct: 177 MDLKGISISSAYSVMSYVREASYISQNY-------YPERMGKFYIINAPFGFSTAFRLFK 229
Query: 61 PFL 63
PFL
Sbjct: 230 PFL 232
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2
Length = 308
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
+D IS+ A Q+ + V E + + G P R+ +++N PF F+A + +FK
Sbjct: 175 LDLKGISISAAAQVLSYVREASNI-------GQNYYPERMGKFYMINAPFGFSAAFRLFK 227
Query: 61 PFL 63
PFL
Sbjct: 228 PFL 230
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3
SV=1
Length = 302
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
MD IS+ A+ + + V E + + P R+ +++N PF F+ + +FK
Sbjct: 175 MDLKGISISSAYSVLSYVREASYISQNY-------YPERMGKFYLINAPFGFSTAFRLFK 227
Query: 61 PFL 63
PFL
Sbjct: 228 PFL 230
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1
Length = 409
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 46 VNQPFYFNALYAIFKPFLKQKLRRRWCL 73
+N P+YF+ +Y++F PFL Q+ + ++ +
Sbjct: 236 INVPWYFSVIYSMFSPFLTQRTKSKFVM 263
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=SEC14 PE=3 SV=2
Length = 301
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
+D IS+ A Q+ + V E + + G P R+ +++N PF F+ + +FK
Sbjct: 175 LDLKGISISSAAQVLSYVREASNI-------GQNYYPERMGKFYLINAPFGFSTAFRLFK 227
Query: 61 PFL 63
PFL
Sbjct: 228 PFL 230
>sp|O35239|PTN9_MOUSE Tyrosine-protein phosphatase non-receptor type 9 OS=Mus musculus
GN=Ptpn9 PE=2 SV=2
Length = 593
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 37 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 70
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|Q641Z2|PTN9_RAT Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus
norvegicus GN=Ptpn9 PE=2 SV=1
Length = 593
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 37 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 70
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1
SV=2
Length = 310
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 1 MDFSKISLEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFK 60
+D ISL A+ + + + ++A + P R+ +I++ PF F+ ++ + K
Sbjct: 179 LDLKGISLSNAYHVLSYIKDVADISQNY-------YPERMGKFYIIHSPFGFSTMFKMVK 231
Query: 61 PFL 63
PFL
Sbjct: 232 PFL 234
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2
Length = 540
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 46 VNQPFYFNALYAIFKPFLKQKLRRRW 71
+N PF+F A+ A+ PFL Q+ + ++
Sbjct: 370 INVPFWFYAMRAVLSPFLTQRTKSKF 395
>sp|P43378|PTN9_HUMAN Tyrosine-protein phosphatase non-receptor type 9 OS=Homo sapiens
GN=PTPN9 PE=1 SV=1
Length = 593
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 37 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 70
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|Q99J08|S14L2_MOUSE SEC14-like protein 2 OS=Mus musculus GN=Sec14l2 PE=2 SV=1
Length = 403
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 34 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 70
E P +K + +V P F Y + KPFL + RR+
Sbjct: 180 ENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRRK 216
>sp|P49193|RALB_TODPA Retinal-binding protein OS=Todarodes pacificus PE=1 SV=2
Length = 343
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 34 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 70
+ P +K + ++N P F LY + KP L + ++ +
Sbjct: 122 DNYPEMMKRLFVINAPTLFPVLYKLVKPLLSEDMKNK 158
>sp|Q5UQW0|YL377_MIMIV Putative ATP-dependent RNA helicase L377 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L377 PE=1 SV=1
Length = 1147
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 8 LEEAFQLGTSVFEIALLDPRLQISGAEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKL 67
L E + + D + I+ AEK +R A+++VNQ + + + +K L +K+
Sbjct: 163 LNEIIKCTGETYTKMFQDKTIVINEAEKNRIRKNALNVVNQYYRIMSYRSFYKKVLGEKI 222
Query: 68 RRR 70
R +
Sbjct: 223 RDK 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.144 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,692,567
Number of Sequences: 539616
Number of extensions: 760615
Number of successful extensions: 2029
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1993
Number of HSP's gapped (non-prelim): 37
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)