BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2055
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6JUQ6|CLVS2_RAT Clavesin-2 OS=Rattus norvegicus GN=Clvs2 PE=1 SV=1
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R IH VNQP+Y +ALY + +PFLK+K R+R
Sbjct: 189 DSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKR 225
>sp|Q8BG92|CLVS2_MOUSE Clavesin-2 OS=Mus musculus GN=Clvs2 PE=2 SV=1
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R IH VNQP+Y +ALY + +PFLK+K R+R
Sbjct: 189 DSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKR 225
>sp|Q95KF7|CLVS2_MACFA Clavesin-2 OS=Macaca fascicularis GN=CLVS2 PE=2 SV=2
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R IH VNQP+Y +ALY + +PFLK+K R+R
Sbjct: 189 DSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKR 225
>sp|Q5SYC1|CLVS2_HUMAN Clavesin-2 OS=Homo sapiens GN=CLVS2 PE=2 SV=1
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R IH VNQP+Y +ALY + +PFLK+K R+R
Sbjct: 189 DSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKR 225
>sp|Q5M7E1|CLVS1_XENLA Clavesin-1 OS=Xenopus laevis GN=clvs1 PE=2 SV=1
Length = 332
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R +H VNQP+Y +ALY I KPFLK K R+R
Sbjct: 189 DSFPARFGGVHFVNQPWYIHALYTIIKPFLKDKTRKR 225
>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal
PE=2 SV=3
Length = 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P+R+KA+HIVN+P F ++AI KPFLK+K+ R
Sbjct: 218 PIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANR 251
>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL
PE=2 SV=1
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P+R+KA+H+VN+P F ++AI KPFLK+K+ R
Sbjct: 217 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANR 250
>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL
PE=2 SV=2
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P+R+KA+H+VN+P F ++AI KPFLK+K+ R
Sbjct: 217 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANR 250
>sp|A6JFQ6|CLVS1_RAT Clavesin-1 OS=Rattus norvegicus GN=Clvs1 PE=1 SV=1
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R +H VNQP+Y +ALY + KPFLK K R+R
Sbjct: 211 DSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKR 247
>sp|Q5RCA6|CLVS1_PONAB Clavesin-1 OS=Pongo abelii GN=CLVS1 PE=2 SV=1
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R +H VNQP+Y +ALY + KPFLK K R+R
Sbjct: 211 DSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKR 247
>sp|Q9D4C9|CLVS1_MOUSE Clavesin-1 OS=Mus musculus GN=Clvs1 PE=2 SV=1
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R +H VNQP+Y +ALY + KPFLK K R+R
Sbjct: 211 DSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKR 247
>sp|Q8IUQ0|CLVS1_HUMAN Clavesin-1 OS=Homo sapiens GN=CLVS1 PE=1 SV=1
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R +H VNQP+Y +ALY + KPFLK K R+R
Sbjct: 211 DSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKR 247
>sp|Q5SPP0|CLVS2_DANRE Clavesin-2 OS=Danio rerio GN=clvs2 PE=2 SV=1
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P R IH VNQP+Y +ALY + +PFLK K R+R
Sbjct: 189 DSFPARFGGIHFVNQPWYIHALYTVIRPFLKDKTRKR 225
>sp|Q9Z275|RLBP1_MOUSE Retinaldehyde-binding protein 1 OS=Mus musculus GN=Rlbp1 PE=2 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVV 50
+ P R KAIH ++QP+YF Y + KPFLK KL +R V
Sbjct: 229 DSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFV 268
>sp|P12271|RLBP1_HUMAN Retinaldehyde-binding protein 1 OS=Homo sapiens GN=RLBP1 PE=1 SV=2
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVV 50
+ P R KAIH ++QP+YF Y + KPFLK KL R V
Sbjct: 229 DSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFV 268
>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 4 RASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ + V + PL+V+ IH++N+P F+A++++ KPFL +K++ R
Sbjct: 178 KIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKER 221
>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1
SV=1
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
A+VV+ + PL+V+ IH++N+P F+A++++ KPFL +K++ R
Sbjct: 180 AAVVT-DSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGR 221
>sp|P10123|RLBP1_BOVIN Retinaldehyde-binding protein 1 OS=Bos taurus GN=RLBP1 PE=1 SV=4
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVV 50
+ P R KAIH + QP+YF Y + KPFLK KL +R V
Sbjct: 229 DSFPARFKAIHFIYQPWYFTTTYNVVKPFLKSKLLQRVFV 268
>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 4 RASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ + V + PL+V+ IH++N+P F+A++++ KPFL +K++ R
Sbjct: 178 KIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKDR 221
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC14 PE=1 SV=3
Length = 304
Score = 36.2 bits (82), Expect = 0.068, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFL 40
AS +S P R+ +I+N PF F+ + +FKPFL
Sbjct: 197 ASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFL 232
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3
SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFL 40
AS +S P R+ +++N PF F+ + +FKPFL
Sbjct: 195 ASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFL 230
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1
Length = 409
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 23 VNQPFYFNALYAIFKPFLKQKLRRRNVV 50
+N P+YF+ +Y++F PFL Q+ + + V+
Sbjct: 236 INVPWYFSVIYSMFSPFLTQRTKSKFVM 263
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2
Length = 308
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFL 40
AS + P R+ +++N PF F+A + +FKPFL
Sbjct: 195 ASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFL 230
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SEC14 PE=2 SV=1
Length = 301
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFL 40
AS + + P R+ +++N PF F+ + +FKPFL
Sbjct: 197 ASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFL 232
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2
Length = 540
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 23 VNQPFYFNALYAIFKPFLKQKLRRRNVV 50
+N PF+F A+ A+ PFL Q+ + + VV
Sbjct: 370 INVPFWFYAMRAVLSPFLTQRTKSKFVV 397
>sp|Q641Z2|PTN9_RAT Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus
norvegicus GN=Ptpn9 PE=2 SV=1
Length = 593
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|O35239|PTN9_MOUSE Tyrosine-protein phosphatase non-receptor type 9 OS=Mus musculus
GN=Ptpn9 PE=2 SV=2
Length = 593
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|P43378|PTN9_HUMAN Tyrosine-protein phosphatase non-receptor type 9 OS=Homo sapiens
GN=PTPN9 PE=1 SV=1
Length = 593
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 14 PLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
P R+K + IV P +F Y+I LK K+R R
Sbjct: 180 PARLKKVLIVGAPIWFRVPYSIISLLLKDKVRER 213
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=SEC14 PE=3 SV=2
Length = 301
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 5 ASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFL 40
AS + P R+ +++N PF F+ + +FKPFL
Sbjct: 195 ASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFL 230
>sp|Q99J08|S14L2_MOUSE SEC14-like protein 2 OS=Mus musculus GN=Sec14l2 PE=2 SV=1
Length = 403
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVV 50
E P +K + +V P F Y + KPFL + RR+ +V
Sbjct: 180 ENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRRKIMV 219
>sp|P49193|RALB_TODPA Retinal-binding protein OS=Todarodes pacificus PE=1 SV=2
Length = 343
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 11 EKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRR 47
+ P +K + ++N P F LY + KP L + ++ +
Sbjct: 122 DNYPEMMKRLFVINAPTLFPVLYKLVKPLLSEDMKNK 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.147 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,558,882
Number of Sequences: 539616
Number of extensions: 1024345
Number of successful extensions: 2186
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2153
Number of HSP's gapped (non-prelim): 33
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)