Query psy2055
Match_columns 86
No_of_seqs 115 out of 702
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 23:04:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aua_A Phosphatidylinositol tr 99.8 3.3E-20 1.1E-24 132.9 6.8 76 2-81 191-269 (296)
2 1r5l_A Alpha-TTP, protein (alp 99.8 1.5E-19 5.1E-24 126.6 5.4 70 2-76 160-229 (262)
3 3hx3_A Retinaldehyde-binding p 99.8 1.9E-19 6.6E-24 131.1 5.3 70 2-76 219-288 (316)
4 1olm_A SEC14-like protein 2; l 99.7 6E-19 2.1E-23 131.2 4.6 70 2-75 171-240 (403)
5 3q8g_A CRAL-TRIO domain-contai 99.7 4.5E-19 1.5E-23 129.7 2.4 74 2-79 206-282 (320)
6 3pg7_A Neurofibromin; SEC lipi 97.0 0.00037 1.3E-08 49.4 2.5 68 3-76 80-150 (256)
7 3peg_A Neurofibromin; SEC14 do 95.9 0.0021 7.1E-08 46.5 1.0 64 2-71 98-162 (290)
8 2oo3_A Protein involved in cat 39.4 30 0.001 24.7 3.6 30 17-46 237-266 (283)
9 2fqc_A Conotoxin PL14A; alpha- 39.3 8.1 0.00028 18.1 0.4 6 76-81 21-26 (26)
10 3sbx_A Putative uncharacterize 34.4 24 0.00083 23.5 2.3 46 17-68 138-188 (189)
11 3qua_A Putative uncharacterize 33.2 30 0.001 23.3 2.6 47 17-69 147-198 (199)
12 4aor_D Trypsin inhibitor 3; hy 31.5 13 0.00044 18.6 0.4 16 69-85 12-27 (37)
13 1ter_A Tertiapin; toxin; NMR { 26.8 23 0.00078 16.3 0.8 10 76-85 2-11 (26)
14 2a33_A Hypothetical protein; s 20.2 80 0.0027 21.3 2.9 39 16-54 138-181 (215)
No 1
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=99.81 E-value=3.3e-20 Score=132.86 Aligned_cols=76 Identities=24% Similarity=0.274 Sum_probs=69.5
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHHHHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCCC---Ccccc
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFLI---KGNCN 78 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~Lp---k~~~~ 78 (86)
+|+++.++|++||+|++++|+||+|++|+++|++++|||++++++||++|++++. ++|.++||++.|| +|.|.
T Consensus 191 ~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~----~~L~~~i~~~~LP~~yGG~~~ 266 (296)
T 1aua_A 191 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQ----KELLKQIPAENLPVKFGGKSE 266 (296)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCH----HHHTTTSCSSSSBGGGTSCBC
T ss_pred HHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccH----HHHHhhCCHhhCcHHhCCCCC
Confidence 5788999999999999999999999999999999999999999999999998654 7899999999998 56676
Q ss_pred CCc
Q psy2055 79 NRG 81 (86)
Q Consensus 79 ~~~ 81 (86)
|.+
T Consensus 267 ~~~ 269 (296)
T 1aua_A 267 VDE 269 (296)
T ss_dssp CCG
T ss_pred CCC
Confidence 654
No 2
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=99.78 E-value=1.5e-19 Score=126.63 Aligned_cols=70 Identities=24% Similarity=0.455 Sum_probs=65.9
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHHHHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCCCCcc
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFLIKGN 76 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~Lpk~~ 76 (86)
+|+++.++|++||+|++++|+||+|++|+++|++++|||++++++||++|++++. ++|.++|| +.||+++
T Consensus 160 ~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~~~----~~L~~~i~-~~LP~~y 229 (262)
T 1r5l_A 160 AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYK----QSLLQHFP-DILPLEY 229 (262)
T ss_dssp HHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCH----HHHHHHST-TTSCGGG
T ss_pred HHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCCcH----HHHHHHhh-hhCcHhh
Confidence 6889999999999999999999999999999999999999999999999988654 79999999 9999765
No 3
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=99.77 E-value=1.9e-19 Score=131.07 Aligned_cols=70 Identities=31% Similarity=0.471 Sum_probs=66.3
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHHHHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCCCCcc
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFLIKGN 76 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~Lpk~~ 76 (86)
+|+++.++|++||.|++++|+||+|++|+++|++++|||++|+++||++|++++ ++|+++||+++||+++
T Consensus 219 ~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~~-----~~L~~~I~~~~LP~ey 288 (316)
T 3hx3_A 219 LRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDL-----SGFYQEIDENILPSDF 288 (316)
T ss_dssp HHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETCC-----HHHHHHSCGGGSBGGG
T ss_pred HHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCCH-----HHHHhhCCHhhCcHhh
Confidence 688999999999999999999999999999999999999999999999998763 6899999999999876
No 4
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=99.75 E-value=6e-19 Score=131.15 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=65.6
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHHHHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCCCCc
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFLIKG 75 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~Lpk~ 75 (86)
+|+++.++|++||+|++++|+||+|++|.++|++++|||++++++||++|++++. ++|.++||+++||++
T Consensus 171 ~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~----~~L~~~I~~~~LP~~ 240 (403)
T 1olm_A 171 YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWK----EVLLKHISPDQVPVE 240 (403)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHH----HHHTTTSCGGGSBGG
T ss_pred HHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHH----HHHHhhcChhhCchh
Confidence 5889999999999999999999999999999999999999999999999987644 789999999999854
No 5
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=99.74 E-value=4.5e-19 Score=129.69 Aligned_cols=74 Identities=19% Similarity=0.208 Sum_probs=67.9
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHHHHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCCCC---cccc
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALYAIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFLIK---GNCN 78 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~Lpk---~~~~ 78 (86)
+|+++.++|++||+|++++|+||+|++|+++|+++++||++++++||++|++++. ++|.++||+++||+ |.|.
T Consensus 206 ~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~----~~L~~~i~~~~LP~~yGG~~~ 281 (320)
T 3q8g_A 206 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYK----KELLKQIPIENLPVKYGGTSV 281 (320)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHH----HHHHHHSCGGGSBGGGTSCBC
T ss_pred HHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcH----HHHHhhCChhhCChhhCCCCC
Confidence 5788999999999999999999999999999999999999999999999998754 79999999999975 4466
Q ss_pred C
Q psy2055 79 N 79 (86)
Q Consensus 79 ~ 79 (86)
|
T Consensus 282 ~ 282 (320)
T 3q8g_A 282 L 282 (320)
T ss_dssp C
T ss_pred C
Confidence 5
No 6
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=96.95 E-value=0.00037 Score=49.44 Aligned_cols=68 Identities=15% Similarity=-0.101 Sum_probs=52.0
Q ss_pred hHHHHHhhcccccccceEEEEcCChhHHHHHHH-HHHHhhHHhhCCeEEecCCcccccCCcccccCCcCCC--CCcc
Q psy2055 3 YRASVVSLEKIPLRVKAIHIVNQPFYFNALYAI-FKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGFL--IKGN 76 (86)
Q Consensus 3 kk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~~l-~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~L--pk~~ 76 (86)
+++...+..-|.-.+++++++|+++++...+.. .++|.+.|..+++++..+. ++|.++|+.+.| |+++
T Consensus 80 ~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl------~eL~~~i~~~~L~LP~~t 150 (256)
T 3pg7_A 80 SKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCP------GKLAEHIEHEQQKLPAAT 150 (256)
T ss_dssp HHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESST------TGGGGTSCGGGCCCCHHH
T ss_pred HHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCH------HHHHhhcCHHHcCCChHH
Confidence 334444455566788999999999999976654 5667777899999999888 899999987776 6543
No 7
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=95.89 E-value=0.0021 Score=46.50 Aligned_cols=64 Identities=16% Similarity=-0.095 Sum_probs=44.4
Q ss_pred HhHHHHHhhcccccccceEEEEcCChhHHHHH-HHHHHHhhHHhhCCeEEecCCcccccCCcccccCCcCC
Q psy2055 2 FYRASVVSLEKIPLRVKAIHIVNQPFYFNALY-AIFKPFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKKGF 71 (86)
Q Consensus 2 lkk~~~~~q~~~P~R~k~ihiIN~P~~~~~i~-~l~k~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~~~ 71 (86)
++++...+..-|..++++++++|++.+|.... .++++|.+.|..+|+.+.++. ..+.+++|.++
T Consensus 98 l~~~~~llp~~~~kNl~~~Yi~np~~~f~~~~k~~~~~~~~~k~~~k~v~~~~~------~~L~~~i~~~~ 162 (290)
T 3peg_A 98 LSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCP------GKLAEHIEHEQ 162 (290)
T ss_dssp HGGGGTSSCHHHHHTEEEEEEESCCHHHHHHHHHTTTTGGGGTTCTTEEEESSS------CC---------
T ss_pred HHHHHHHCCHHHHhhccEEEEECCCHHHHHHHHHHHhhhhhhhcCceEEEcCCH------HHHHhhCCHHH
Confidence 35555666677788999999999999998755 467888889999999998777 45888887774
No 8
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=39.37 E-value=30 Score=24.66 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=26.5
Q ss_pred cceEEEEcCChhHHHHHHHHHHHhhHHhhC
Q psy2055 17 VKAIHIVNQPFYFNALYAIFKPFLKQKLRR 46 (86)
Q Consensus 17 ~k~ihiIN~P~~~~~i~~l~k~fl~~Klr~ 46 (86)
=.++.+||.|+.++..+.-+.|+|.+.+.+
T Consensus 237 gsGm~viNpP~~l~~~~~~~l~~l~~~l~~ 266 (283)
T 2oo3_A 237 GCGLWIINPPYTFPSEIKLVLETLTTYFNP 266 (283)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHHHHHSST
T ss_pred ceeEEEECCchhHHHHHHHHHHHHHHHhCC
Confidence 356799999999999999999999998865
No 9
>2fqc_A Conotoxin PL14A; alpha-helix, disulfide bonds; NMR {Synthetic}
Probab=39.34 E-value=8.1 Score=18.09 Aligned_cols=6 Identities=33% Similarity=0.650 Sum_probs=3.5
Q ss_pred cccCCc
Q psy2055 76 NCNNRG 81 (86)
Q Consensus 76 ~~~~~~ 81 (86)
.|+|+|
T Consensus 21 fC~Crg 26 (26)
T 2fqc_A 21 FCHCRX 26 (26)
T ss_dssp GGCCC-
T ss_pred cCCCCC
Confidence 477776
No 10
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=34.44 E-value=24 Score=23.55 Aligned_cols=46 Identities=17% Similarity=0.115 Sum_probs=35.4
Q ss_pred cceEEEEcCChhHHHHHHHHH-----HHhhHHhhCCeEEecCCcccccCCcccccCC
Q psy2055 17 VKAIHIVNQPFYFNALYAIFK-----PFLKQKLRRRNVVRLQTHYCCIGDGKKVFIK 68 (86)
Q Consensus 17 ~k~ihiIN~P~~~~~i~~l~k-----~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id 68 (86)
-|-|.++|..-+.+-+++++. .|++++-++.+.+..+. +++.++|.
T Consensus 138 ~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~------ee~~~~l~ 188 (189)
T 3sbx_A 138 DKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNL------DDALQACA 188 (189)
T ss_dssp CCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHHHHEEEESSH------HHHHHHHC
T ss_pred CCCEEEecCCccchHHHHHHHHHHHCCCCCHHHcCeEEEeCCH------HHHHHHhc
Confidence 478999999878887877764 47778888889998877 66666654
No 11
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=33.22 E-value=30 Score=23.29 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=36.4
Q ss_pred cceEEEEcCChhHHHHHHHHH-----HHhhHHhhCCeEEecCCcccccCCcccccCCc
Q psy2055 17 VKAIHIVNQPFYFNALYAIFK-----PFLKQKLRRRNVVRLQTHYCCIGDGKKVFIKK 69 (86)
Q Consensus 17 ~k~ihiIN~P~~~~~i~~l~k-----~fl~~Klr~RI~vh~~~~~~~~~~~l~~~id~ 69 (86)
-|-|.++|..-+.+-+++++. .|++++-++.+.+..+. +++.+++.+
T Consensus 147 ~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~------~e~~~~l~~ 198 (199)
T 3qua_A 147 DKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNV------EAALEACAP 198 (199)
T ss_dssp CCCEEEECTTSTTHHHHHHHHHTTTTTSSCHHHHHTSEEESSH------HHHHHHHSC
T ss_pred CCCEEEEcCCccchHHHHHHHHHHHCCCCCHHHCCeEEEeCCH------HHHHHHHhc
Confidence 467999998778888888875 47777888889998887 677666653
No 12
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=31.52 E-value=13 Score=18.63 Aligned_cols=16 Identities=38% Similarity=0.642 Sum_probs=9.8
Q ss_pred cCCCCCccccCCccccC
Q psy2055 69 KGFLIKGNCNNRGLIVP 85 (86)
Q Consensus 69 ~~~Lpk~~~~~~~~~~~ 85 (86)
+.+=|.++| |+|.-||
T Consensus 12 ~~f~~p~~c-csg~cvp 27 (37)
T 4aor_D 12 SGFGPPEQC-CSGACVP 27 (37)
T ss_dssp CTTSCGGGB-TTSCEEE
T ss_pred CCCCCcccc-ccccccC
Confidence 344456666 6777666
No 13
>1ter_A Tertiapin; toxin; NMR {Apis mellifera} SCOP: j.20.1.1
Probab=26.79 E-value=23 Score=16.27 Aligned_cols=10 Identities=40% Similarity=0.909 Sum_probs=8.3
Q ss_pred cccCCccccC
Q psy2055 76 NCNNRGLIVP 85 (86)
Q Consensus 76 ~~~~~~~~~~ 85 (86)
-|+|.-.|.|
T Consensus 2 lcncnriiip 11 (26)
T 1ter_A 2 LCNCNRIIIP 11 (26)
T ss_dssp CCCTTSSSCC
T ss_pred cccCCcEech
Confidence 4899888887
No 14
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.17 E-value=80 Score=21.25 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=30.3
Q ss_pred ccceEEEEcCChhHHHHHHHH-----HHHhhHHhhCCeEEecCC
Q psy2055 16 RVKAIHIVNQPFYFNALYAIF-----KPFLKQKLRRRNVVRLQT 54 (86)
Q Consensus 16 R~k~ihiIN~P~~~~~i~~l~-----k~fl~~Klr~RI~vh~~~ 54 (86)
.-|-|.++|..-+.+-+++++ ..|+++.-++.+.+..+.
T Consensus 138 ~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ 181 (215)
T 2a33_A 138 HDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTA 181 (215)
T ss_dssp CCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEESSH
T ss_pred CCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeCCH
Confidence 457789999877777777766 457777888899888876
Done!