BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2060
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 61 HWGDTCETDITK-SDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFP 119
H G CET + C P TC GG C + Y C LRAR+F
Sbjct: 1512 HTGQNCETGVGHLRPC-----PSETCE----GGLSCLSNYPSSQPPPYTATCELRARAFG 1562
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
+NSFLTF +LKQR+R ++KL+F+T+ ++GLLLYNGRYNE HDFIALE+ + V FS+S
Sbjct: 1563 RNSFLTFESLKQRHRFNLKLRFATVQENGLLLYNGRYNELHDFIALEIHEG--HVSFSFS 1620
Query: 180 LGSEVARLN 188
LG R++
Sbjct: 1621 LGDHSERIS 1629
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE D C GVC G TC+ P+GG+ C C G++E C + ARSFP +
Sbjct: 1467 GEDCELDTEAGRCVPGVCRNGGTCTDAPNGGFRCQ-CPAGGAFE--GPRCEVAARSFPPS 1523
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
SF+ F L+QR L + L F+T+ SGLL YNGR NE+HDF+ALEL V+ ++S G
Sbjct: 1524 SFVMFRGLRQRFHLTLSLSFATVQQSGLLFYNGRLNEKHDFLALELVAG--QVRLTYSTG 1581
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE D C GVC G TC+ P+GG+ C C G++E C + ARSFP +
Sbjct: 1458 GEDCELDTEAGRCVPGVCRNGGTCTNAPNGGFRCQ-CPAGGAFE--GPRCEVAARSFPPS 1514
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
SF+ F L+QR L + L F+T+ SGLL YNGR NE+HDF+ALEL V+ ++S G
Sbjct: 1515 SFVMFRGLRQRFHLTLSLSFATVQPSGLLFYNGRLNEKHDFLALELVAG--QVRLTYSTG 1572
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 66 CETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKNSFL 124
CE D C GVC G TC+ P+GG+ C C G++E C + ARSFP +SF+
Sbjct: 1459 CELDTEAGRCVPGVCRNGGTCTNAPNGGFRCQ-CPAGGAFE--GPRCEVAARSFPPSSFV 1515
Query: 125 TFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
F L+QR L + L F+T+ SGLL YNGR NE+HDF+ALEL V+ ++S G
Sbjct: 1516 MFRGLRQRFHLTLSLSFATVQPSGLLFYNGRLNEKHDFLALELVAG--QVRLTYSTG 1570
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE D C GVC G TC GG+ C G YE C + RSFP
Sbjct: 1395 GEHCEVDARSGRCANGVCKNGGTCVNLLIGGFHC--VCPPGEYER--PYCEVTTRSFPPQ 1450
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
SF+TF L+QR I L F+T +GLLLYNGR+NE+HDFIALE+ D VQ ++S G
Sbjct: 1451 SFVTFRGLRQRFHFTISLTFATQERNGLLLYNGRFNEKHDFIALEIVD--EQVQLTFSAG 1508
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ C+ ++ C GVC G TC GG+ C G YEH C + RSFP
Sbjct: 1410 GEHCQVNVRSGRCASGVCKNGGTCVNLLIGGFHC--VCPPGEYEH--PYCEVSTRSFPPQ 1465
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFS 177
SF+TF L+QR + L F+T + LLLYNGR+NE+HDFIALE+ + + FS
Sbjct: 1466 SFVTFRGLRQRFHFTVSLAFATQDRNALLLYNGRFNEKHDFIALEIVEEQLQLTFS 1521
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 61 HWGDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFP 119
+ G+ CE C GVC G TC GG+ CD C +G +E C++ RSFP
Sbjct: 1318 YTGEHCEVSARSGRCTPGVCKNGGTCVNLLVGGFKCD-CP-SGDFEK--PYCQVTTRSFP 1373
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
+SF+TF L+QR + L F+T GLLLYNGR+NE+HDF+ALE+ VQ ++S
Sbjct: 1374 AHSFITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKHDFVALEVIQ--EQVQLTFS 1431
Query: 180 LGSEVARLN 188
G ++
Sbjct: 1432 AGESTTTVS 1440
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE C GVC G TC GG+ CD C +G +E C++ RSFP
Sbjct: 545 GEHCEVSARSGRCTPGVCKNGGTCVNLLVGGFKCD-CP-SGDFEK--PFCQVTTRSFPAR 600
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
SF+TF L+QR + L F+T GLLLYNGR+NE+HDF+ALE+ VQ ++S G
Sbjct: 601 SFITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKHDFVALEVIQ--EQVQLTFSAG 658
Query: 182 SEVARLN 188
++
Sbjct: 659 ESTTTVS 665
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 63 GDTCETDITKSDC-KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE C GVC G TC GG CD C +G +E C++ RSFP
Sbjct: 1321 GEHCEASTHSGRCTPGVCKNGGTCVNLLVGGIKCD-CP-SGHFEK--PFCQVTTRSFPAR 1376
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181
F+TF L QR + L F+T +GLLLYNGR+NE+HDF+ALE+ VQ ++S G
Sbjct: 1377 PFITFRGLHQRFHFTLALSFATKERNGLLLYNGRFNEKHDFVALEVIQ--EQVQLTFSAG 1434
Query: 182 SEVARLN 188
++
Sbjct: 1435 ESTTTVS 1441
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 16/129 (12%)
Query: 63 GDTCETDITKSDCKGVCSPGATCSLNPSG--GYICDDCSLAGSYEHYDRLCRLRARSFPK 120
G CE+ + +C C G +C SG Y C C +H C L + F +
Sbjct: 3934 GKMCESSVNYCECNP-CFNGGSCQ---SGVESYYCH-CPFGVFGKH----CELNSYGFEE 3984
Query: 121 NSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYN--GRYNERHDFIALELTDSGRSVQFSW 178
S++ FP+L N +I ++F+T+ LLLYN + ER +F+ALE+ + ++FS+
Sbjct: 3985 LSYMEFPSLDPNNN-YIYVKFATIKSHALLLYNYDNQTGERAEFLALEIAE--ERLRFSY 4041
Query: 179 SLGSEVARL 187
+LGS +L
Sbjct: 4042 NLGSGTYKL 4050
Score = 30.4 bits (67), Expect = 7.0, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 61 HWGDTCETDITKSDCKGV-CSPGATCSLNPSGGYIC 95
H G TCET + C GV C G C GG++C
Sbjct: 4458 HTGRTCETVVA---CLGVLCPQGKVCKAGSPGGHVC 4490
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 16/129 (12%)
Query: 63 GDTCETDITKSDCKGVCSPGATCSLNPSG--GYICDDCSLAGSYEHYDRLCRLRARSFPK 120
G CE+ + +C C G +C SG Y C C +H C L + F +
Sbjct: 3932 GKMCESSVNYCECNP-CFNGGSCQ---SGVDSYYCH-CPFGVFGKH----CELNSYGFEE 3982
Query: 121 NSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYN--GRYNERHDFIALELTDSGRSVQFSW 178
S++ FP+L N +I ++F+T+ LLLYN + +R +F+ALE+ + ++FS+
Sbjct: 3983 LSYMEFPSLDPNNN-YIYVKFATIKSHALLLYNYDNQTGDRAEFLALEIAE--ERLRFSY 4039
Query: 179 SLGSEVARL 187
+LGS +L
Sbjct: 4040 NLGSGTYKL 4048
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 82 GATCSLNPSG-GYICDDCSLAGSYEHYDRLCRLRARSFPKNSFLTFPALKQRNRLHIKLQ 140
G TC SG G+ C C+ +++ +F +SFL FP L+ + L + L+
Sbjct: 1232 GGTCQDQDSGKGFTCS-CTAGRGGSVCEKVQPPSMPAFKGHSFLAFPTLRAYHTLRLALE 1290
Query: 141 FSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLN 188
F L GLLLYNG + DF+AL L D GR VQF + GS A L
Sbjct: 1291 FRALETEGLLLYNGNARGK-DFLALALLD-GR-VQFRFDTGSGPAVLT 1335
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 62 WGDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR-ARSFP 119
+G TC + KS C+ C A C + SGG C+ C L S + +R F
Sbjct: 1472 FGPTCADE--KSPCQPNPCHGAAPCRVLSSGGAKCE-CPLGRSGTFCQTVLETAGSRPFL 1528
Query: 120 KN----SFLTFPALKQRNR-----LHIKLQFSTLHDSGLLLYNGRYNE-RHDFIALELTD 169
+ S+L L R + +++ F SGLLLYNG+ + + DF++L L +
Sbjct: 1529 ADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHN 1588
Query: 170 SGRSVQFSWSLGSEVARLNRADSI 193
R ++F + LG A + + I
Sbjct: 1589 --RHLEFCYDLGKGAAVIRSKEPI 1610
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 91 GGYICDDCSLAGSYEHYDRLCRLRARSFPKNSFLTFPALKQRNRLHIKLQFSTLHDSGLL 150
GG+ C C +++ +F SFL FP L+ + L + L+F L GLL
Sbjct: 1351 GGFTCS-CPAGRGGAVCEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRALEPQGLL 1409
Query: 151 LYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193
LYNG + DF+AL L D GR VQ + GS A L A +
Sbjct: 1410 LYNGNARGK-DFLALALLD-GR-VQLRFDTGSGPAVLTSAVPV 1449
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 136 HIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARL 187
H +L T GL+L++G+ ER D++AL + D +Q S++LGS+ L
Sbjct: 1914 HFELSLRTEATQGLVLWSGKATERADYVALAIVDG--HLQLSYNLGSQPVVL 1963
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 25/147 (17%)
Query: 63 GDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G TC + KS C+ C A C + P GG C+ C L C+ +
Sbjct: 1582 GPTCADE--KSPCQPNPCHGAAPCRVLPEGGAQCE-CPLG----REGTFCQTASGQDGSG 1634
Query: 122 SFLT----FPALKQRN----------RLHIKLQFSTLHDSGLLLYNGRYNE-RHDFIALE 166
FL F L+ R ++ +++ F SGLLLYNG+ + + DF++L
Sbjct: 1635 PFLADFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLA 1694
Query: 167 LTDSGRSVQFSWSLGSEVARLNRADSI 193
L D R ++F + LG A + + +
Sbjct: 1695 LRD--RRLEFRYDLGKGAAVIRSREPV 1719
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 82 GATCS-LNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKNSFLTFPALKQRNRLHIKLQ 140
G TC L+ G+ C C+ + +++ +F +SFL FP L+ + L + L+
Sbjct: 1223 GGTCQDLDSGKGFSCS-CTAGRAGTVCEKVQLPSVPAFKGHSFLAFPTLRAYHTLRLALE 1281
Query: 141 FSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLN 188
F L GLLLYNG + DF+AL L D VQF + GS A L
Sbjct: 1282 FRALETEGLLLYNGNARGK-DFLALALLDG--HVQFRFDTGSGPAVLT 1326
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 133 NRLHIKLQFSTLHDSGLLLYNGRYNE-RHDFIALELTDSGRSVQFSWSLGSEVARLNRAD 191
++ +++ F SGLLLYNG+ + + DF++L L + R ++F + LG A + +
Sbjct: 1542 EKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHN--RHLEFRYDLGKGAAIIRSKE 1599
Query: 192 SI 193
I
Sbjct: 1600 PI 1601
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 78 VCSPGATCSLNPSG-GYICDDCSLAGSYEHYDRLCRLRARSFP-KNSFLTFPALKQ-RNR 134
C P ATC P G GY C C L S + + S S+L PAL +
Sbjct: 3892 ACGPDATCVNRPDGRGYTC-RCHLGRSGLRCEEGVTVTTPSLSGAGSYLALPALTNTHHE 3950
Query: 135 LHIKLQFSTLHDSGLLLYN-GRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193
L + ++F L G+LL++ G+ DF++L + G ++F + LGS +A L A+ +
Sbjct: 3951 LRLDVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMV--GGHLEFRYELGSGLAVLRSAEPL 4008
Score = 37.4 bits (85), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 90 SGGYICDDCSLAGSYEHYDRLCRLRARSFP-----KNSFLTFPALKQRNR-LHIKLQFST 143
+G Y+C + G + + L ++ R P SFL P +K R IK+ F
Sbjct: 3636 AGTYVCTATNRQGKVKAFAHL-QVPERVVPYFTQTPYSFLPLPTIKDAYRKFEIKITFRP 3694
Query: 144 LHDSGLLLYNGR----------YNERHDFIALELTDSGRSVQFSWSLGSEVARL 187
G+LLYNG+ N + DFI+ L G +F + GS +A +
Sbjct: 3695 DSADGMLLYNGQKRVPGSPTNLANRQPDFISFGLV--GGRPEFRFDAGSGMATI 3746
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 63 GDTCETDITKSDCKGVCSPGATCS------LNPSGGYICDDCSLAGSYEHYDRLCRLRAR 116
GD CE + + C G TC L G C S G E L
Sbjct: 4137 GDLCEHEENPCQLREPCLHGGTCQGTRCLCLPGFSGPRCQQGSGHGIAESDWHLEGSGGN 4196
Query: 117 SFP--------KNSFLTFPALKQRNRLH-----IKLQFSTLHDSGLLLYN----GRYNER 159
P + FL FP L I+L+ T SGLLL+ G +
Sbjct: 4197 DAPGQYGAYFHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQG 4256
Query: 160 HDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193
DFI+L L D + F + LGS ARL D I
Sbjct: 4257 KDFISLGLQDG--HLVFRYQLGSGEARLVSEDPI 4288
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 63 GDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKNS 122
G TCE D + C+ C G GG +C+ + R SF S
Sbjct: 1359 GGTCEDDGREFTCR--CPAG-------KGGAVCE------------KPIRYFIPSFGGKS 1397
Query: 123 FLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGS 182
+L F +K + + I ++F SGLLLYNG+ N DFI+L L ++F+ G+
Sbjct: 1398 YLAFKMMKAYHTVRIAMEFRATELSGLLLYNGQ-NRGKDFISLALVGGFVELRFNTGSGT 1456
Query: 183 EV 184
V
Sbjct: 1457 GV 1458
Score = 36.6 bits (83), Expect = 0.11, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 115 ARSFPKNSFLTFPALKQRNRL---HIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSG 171
+ P L +PA L H +L T GL+L++G+ ER D+IAL + D
Sbjct: 1904 SNEIPAPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDG- 1962
Query: 172 RSVQFSWSLGSE 183
VQ + LGS+
Sbjct: 1963 -FVQMMYDLGSK 1973
Score = 33.5 bits (75), Expect = 0.81, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 63 GDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRAR-----S 117
G TC + D C ATC + P GG +C C + E +R+
Sbjct: 1597 GPTCADERNPCD-PTPCHISATCLVLPEGGAMC-ACPMGREGEFCERVTEQDHTMPFLPE 1654
Query: 118 FPKNSFLTFPALKQR----NRLHIKLQFSTLHDSGLLLYNGRYNE-RHDFIALELTDSGR 172
F S+L L+ ++ +++ F SG++ YNG+ + + DF++L L D
Sbjct: 1655 FNGFSYLELNGLQTLFLTCRQMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYL 1714
Query: 173 SVQFSWSLGSEVAR 186
++ G+ V R
Sbjct: 1715 EYRYDLGKGAAVLR 1728
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 48 RTLDLLHDMGARYHWGDTCETDITKSDCKG-VCSPGATCSLNPSGGYICDDCSLAGSYEH 106
RT+ + HD + WG E C G C+ G +C G Y CD C L H
Sbjct: 776 RTIHVKHD----FTWGVNVEN--AAHPCVGSPCAHGGSCRPRKEG-YECD-CPLGFEGLH 827
Query: 107 YDRLCR--LRARSFPKNSFLTF--PALKQR---NRLHIKLQFSTLHDSGLLLYNGRYNER 159
+ + F S+LT+ P + +R +R + ++F T GLLL+ G R
Sbjct: 828 CQKAITEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMR 887
Query: 160 --HDFIALELTDSGRSVQFSWSLGSEVARL 187
DFI+L L D ++ FS++LGS VA +
Sbjct: 888 PNSDFISLGLRDG--ALVFSYNLGSGVASI 915
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 63 GDTCETDITKSDCKGVCSPGATC-SLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPKN 121
G+ CE+ ++ S C G C SL P GY C+ C+ Y R C + F
Sbjct: 4086 GNQCES-VSDSCRPNPCLHGGLCVSLKP--GYKCN-CTPG----RYGRHCERFSYGFQPL 4137
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYN--GRYNERHDFIALELT 168
S++TFPAL I + F+T + LLLYN + R DF+A+EL
Sbjct: 4138 SYMTFPALDVTTN-DISIVFATTKPNSLLLYNYGMQSGGRSDFLAIELV 4185
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K S+L P+ K R + +I LQ +T DSG+LLY G D IA+EL GR V+ S+
Sbjct: 1159 KESYLQIPSAKVRPQTNITLQIATDEDSGILLYKG----DKDHIAVELY-RGR-VRASYD 1212
Query: 180 LGSEVA 185
GS A
Sbjct: 1213 TGSHPA 1218
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K S+L P+ K R + +I LQ +T DSG+LLY G D IA+EL GR V+ S+
Sbjct: 1167 KESYLQIPSAKVRPQTNITLQIATDEDSGILLYKG----DKDHIAVELY-RGR-VRASYD 1220
Query: 180 LGSEVA 185
GS A
Sbjct: 1221 TGSHPA 1226
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 111 CRLRARSFPKNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRY--NER-----HDFI 163
C+ RSF N + +P L+ + H+ L+F T GL++YNG ER DFI
Sbjct: 2377 CQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGLIIYNGPIVPPERDETLISDFI 2436
Query: 164 ALEL 167
ALEL
Sbjct: 2437 ALEL 2440
>sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5
Length = 3165
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRY--NERHDFIALELTDSGRSVQFSWS 179
S+++F + R + HI+LQF L G+L Y ++ + DF+ + L +S SVQ ++
Sbjct: 2726 SWMSFASFHVRKKTHIQLQFQPLAADGILFYAAQHLKAQSGDFLCISLVNS--SVQLRYN 2783
Query: 180 LGSEVARLNRADSI 193
LG L +
Sbjct: 2784 LGDRTIILETLQKV 2797
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 56 MGARYHWGDTCETD----ITKSDCKGV-CSPGATCSLNPSGGYICDDCSLAGSYEHYDRL 110
+ A + G CE KS C+G C GA C ++ +C C ++L
Sbjct: 1108 LCAEGYSGQLCEIPPHLPAPKSPCEGTECQNGANC-VDQGNRPVCQ-CLPGFGGPECEKL 1165
Query: 111 CRLRARSFPKNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDS 170
L ++++L F L+ R +I LQ ST D+G+LLYNG +D IA+EL
Sbjct: 1166 --LSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYNG----DNDHIAVELYQG 1219
Query: 171 GRSVQFSWSLGS 182
V+ S+ GS
Sbjct: 1220 --HVRVSYDPGS 1229
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 63 GDTCETD-ITKSDCKGV-CSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRARSFPK 120
G CE +S C+G C GA C ++ +C G E ++L L +
Sbjct: 1115 GQLCEIPPAPRSSCEGTECQNGANC-VDQGSRPVCQCLPGFGGPE-CEKL--LSVNFVDR 1170
Query: 121 NSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSL 180
+++L F L+ R +I LQ ST D+G+LLYNG +D IA+EL V+ S+
Sbjct: 1171 DTYLQFTDLQNWPRANITLQVSTAEDNGILLYNG----DNDHIAVELYQG--HVRVSYDP 1224
Query: 181 GS 182
GS
Sbjct: 1225 GS 1226
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
++++L F L+ R +I LQ ST D+G+LLYNG +D IA+EL V+ S+
Sbjct: 1170 RDTYLQFTDLQNWPRANITLQVSTAEDNGILLYNG----DNDHIAVELYQG--HVRVSYD 1223
Query: 180 LGS 182
GS
Sbjct: 1224 PGS 1226
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 76 KGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLC----------RLRARSFPKNSFLT 125
+ C+ G +C G Y CD C L H + C + F S+LT
Sbjct: 790 RAPCAHGGSCRPRKEG-YDCD-CPLGFEGLHCQKECGNYCLNTIIEAIEIPQFIGRSYLT 847
Query: 126 F--PALKQR---NRLHIKLQFSTLHDSGLLLYNGRYNER--HDFIALELTDSGRSVQFSW 178
+ P + +R +R ++ ++F T GLLL+ G R DFI+L L D ++ FS+
Sbjct: 848 YDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG--ALVFSY 905
Query: 179 SLGSEVARL 187
+LGS VA +
Sbjct: 906 NLGSGVASI 914
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 111 CRLRARSFPKNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNG-------RYNERHDFI 163
C+ RSF N + +P L+ H+ L+F T GL+LYNG DFI
Sbjct: 1179 CQQSTRSFRGNGWAWYPPLQLCQESHLSLEFITRVADGLILYNGPIVPPKPEETVISDFI 1238
Query: 164 ALEL 167
ALEL
Sbjct: 1239 ALEL 1242
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
++S++T P L+ +H+ QF T GL+LYN + +DFI +EL
Sbjct: 901 RSSYVTLPTLQAYYSMHLFFQFKTTSPDGLILYN--RGDGNDFIVVELV 947
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 90 SGGYICDDCSLAGSYEHYDRLCRLRARSFP-----KNSFLTFPALKQRNR-LHIKLQFST 143
+G Y+C + G + + L ++ R P SFL P +K R IK+ F
Sbjct: 2957 AGTYVCTATNRQGKVKAFAYL-QVPERVIPYFTQTPYSFLPLPTIKDAYRKFEIKITFRP 3015
Query: 144 LHDSGLLLYNGR-------YNERHDFIALELTDSGRSVQFSWSLGSEVARL 187
G+LLYNG+ N + DFI+ L G +F + GS +A +
Sbjct: 3016 DSADGMLLYNGQKRSPTNLANRQPDFISFGLV--GGRPEFRFDAGSGMATI 3064
>sp|A1XQX8|NR3AA_DANRE Neurexin-3a OS=Danio rerio GN=nrxn3a PE=2 SV=1
Length = 1697
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
KNS+L+ L+ +H+ QF T G +L+N + DFIA+EL F+
Sbjct: 893 KNSYLSLATLQAYTSMHLFFQFKTTSADGFILFNS--GDGSDFIAVELVKGYIHYVFNLG 950
Query: 180 LGSEVARLN 188
G V + N
Sbjct: 951 NGPNVIKGN 959
>sp|Q6P9K9|NRX3A_MOUSE Neurexin-3 OS=Mus musculus GN=Nrxn3 PE=1 SV=2
Length = 1571
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K+S+LT L+ +H+ QF T G +L+N + +DFIA+EL F
Sbjct: 878 KSSYLTLATLQAYTSMHLFFQFKTTSADGFILFNS--GDGNDFIAVELVKGYIHYVFDLG 935
Query: 180 LGSEVARLN 188
G V + N
Sbjct: 936 NGPNVIKGN 944
>sp|A1XQX2|NR1BA_DANRE Neurexin-1b OS=Danio rerio GN=nrxn1b PE=2 SV=1
Length = 1470
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 121 NSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
+S++T P+L+ +++ QF T GL+LYN + +DFIA+EL
Sbjct: 882 SSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNS--GDGNDFIAVELV 927
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 124 LTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSE 183
+ F K +NRL I+L+ T +SGLL Y GR N DF ++L + FS+ LGS
Sbjct: 2772 IVFDDTKVKNRLTIELEVRTEAESGLLFYMGRIN-HADFGTVQLRNGFPF--FSYDLGSG 2828
Query: 184 VAR 186
R
Sbjct: 2829 STR 2831
>sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1
Length = 2176
Score = 37.0 bits (84), Expect = 0.090, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 45 GGHRTLD---LLHDMGARYHWGDTCETDITKS--DCK--GVCSPGATCSL-NPSGGYICD 96
GGH LD H + Y GD CE T CK G C CS N GG+ C+
Sbjct: 1887 GGHCWLDEKLQPHCICPEYAKGDRCEYSETCKLIPCKNNGRCLRSGRCSCPNGWGGFYCE 1946
Query: 97 DCSLAGSYEHYDRLCRLRARSFPKNSFLTFPA---------------LKQRNRLHIKLQF 141
+ + SF NS+L P ++ R + + L F
Sbjct: 1947 IA-----------MSKPTTPSFRGNSYLILPPPRIPMKDKRRGPSLYVRPREAIQVSLNF 1995
Query: 142 STLHDSGLLLYNGRYNERHDFIALEL 167
ST+ GLLL++ +ER F+ L L
Sbjct: 1996 STIEPDGLLLWS--EHERSKFLGLGL 2019
Score = 35.4 bits (80), Expect = 0.22, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 61 HWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLA--GSYEHYDRLCRLRARSF 118
+ G TCE + + + C G TC P GY+C C L G Y ++ L + S
Sbjct: 1303 YMGPTCEISVCEDN---PCQYGGTCVQFPGSGYLC-LCPLGKHGHYCEHNLEVALPSFSG 1358
Query: 119 PKNSFLTFPA------LKQRNRLHIKLQFSTLHDSGLLLY---NGRYNERHDFIALELTD 169
N +F A L+ L K+ T+ LL + +G ++E+ D +A+
Sbjct: 1359 SVNGLSSFVAYTVPIPLEYSLELSFKILPQTMSQISLLAFFGQSGYHDEKSDHLAVSFIQ 1418
Query: 170 SGRSVQFSWSLGSEVARL 187
+ +W+LG+ R+
Sbjct: 1419 G--YIMLTWNLGAGPRRI 1434
>sp|Q9Y4C0|NRX3A_HUMAN Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4
Length = 1643
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K+S+L+ L+ +H+ QF T G +L+N + +DFIA+EL F
Sbjct: 878 KSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNS--GDGNDFIAVELVKGYIHYVFDLG 935
Query: 180 LGSEVARLN 188
G V + N
Sbjct: 936 NGPNVIKGN 944
>sp|Q90404|AGRIN_DIPOM Agrin (Fragment) OS=Diplobatis ommata GN=AGRN PE=2 SV=1
Length = 1328
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 136 HIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARL 187
+ ++ T GL+L++G+ E+ D+IAL + D VQ ++ LGS+ L
Sbjct: 1174 YFEMSIKTEATKGLILWSGKIAEKSDYIALAVVDG--FVQMTYDLGSKPVTL 1223
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 48 RTLDLLHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHY 107
+ ++ H G TC D C A C + P GG C +C + E
Sbjct: 844 KEAEMFHCESVGEFSGPTCADKHNPCD-PNPCHQSANCMVLPEGGSKC-ECPMGREGELC 901
Query: 108 DRLCRL---RARSF-PKNSFLTFPALKQ--------RNRLHIKLQFSTLHDSGLLLYNGR 155
+R+ + ++F P+ + L++ + +L +++ F +G++ YNG+
Sbjct: 902 ERVSEAEQDQGKAFIPEFNGLSYLEMNGIHTFVSDLLQKLSMEVIFLAKDPNGMIFYNGQ 961
Query: 156 YNE-RHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193
+ R DF++L L D ++F + LG A L I
Sbjct: 962 KTDGRGDFVSLNLRDG--YLEFKYDLGKGAAVLRSKAPI 998
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 124 LTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGS 182
+ F K +NRL I+L+ T +SGLL Y R N DF ++L + FS+ LGS
Sbjct: 2776 IAFDDTKVKNRLTIELEVRTEAESGLLFYMARIN-HADFATVQLRNG--LPYFSYDLGS 2831
>sp|D0PRN3|NRX3A_CHICK Neurexin-3 OS=Gallus gallus PE=1 SV=1
Length = 1693
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K+S+L+ L+ +H+ QF T G +L+N + +DFIA+EL F
Sbjct: 897 KSSYLSLATLQAYTSMHLFFQFKTTSADGFILFNS--GDGNDFIAVELVKGYIHYVFDLG 954
Query: 180 LGSEVARLN 188
G V + N
Sbjct: 955 NGPNVIKGN 963
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 132 RNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVAR 186
R I L F T GLL + G+ DF+ALEL+D G V+ S LGS V +
Sbjct: 2917 RKATKISLSFLTFSPHGLLFFVGK---DKDFMALELSDGG--VKLSVDLGSGVGQ 2966
>sp|Q07310|NRX3A_RAT Neurexin-3 OS=Rattus norvegicus GN=Nrxn3 PE=1 SV=1
Length = 1578
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWS 179
K+S+LT L+ +H+ QF T G +L+N + ++FIA+EL F
Sbjct: 882 KSSYLTLATLQAYTSMHLFFQFKTTSADGFILFNS--GDGNNFIAVELVKGYIHYVFDLG 939
Query: 180 LGSEVARLN 188
G V + N
Sbjct: 940 NGPNVIKGN 948
>sp|B4F785|EGFLA_RAT Pikachurin OS=Rattus norvegicus GN=Egflam PE=2 SV=1
Length = 1005
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 75 CKGV-CSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR--LRARSFPKNSFLTF--PAL 129
C G C+ G +C G Y CD C L + + + F S+LT+ P +
Sbjct: 784 CVGAPCAHGGSCRPRKEG-YECD-CPLGFEGLNCQKAITEAIEIPQFIGRSYLTYDNPNI 841
Query: 130 KQR---NRLHIKLQFSTLHDSGLLLYNGRYNER--HDFIALELTDSGRSVQFSWSLGSEV 184
+R +R + ++F T GLLL+ G R DFI+L L D ++ FS++LGS V
Sbjct: 842 LKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG--ALVFSYNLGSGV 899
Query: 185 ARL 187
A +
Sbjct: 900 ASI 902
>sp|Q9ULB1|NRX1A_HUMAN Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1
Length = 1477
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
K+S++ L+ +H+ QF T GL+LYN + +DFI +EL
Sbjct: 912 KSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS--GDGNDFIVVELV 958
>sp|Q9CS84|NRX1A_MOUSE Neurexin-1 OS=Mus musculus GN=Nrxn1 PE=1 SV=3
Length = 1514
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
K+S++ L+ +H+ QF T GL+LYN + +DFI +EL
Sbjct: 919 KSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS--GDGNDFIVVELV 965
>sp|Q63372|NRX1A_RAT Neurexin-1 OS=Rattus norvegicus GN=Nrxn1 PE=1 SV=3
Length = 1530
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
K+S++ L+ +H+ QF T GL+LYN + +DFI +EL
Sbjct: 935 KSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS--GDGNDFIVVELV 981
>sp|Q28146|NRX1A_BOVIN Neurexin-1 OS=Bos taurus GN=NRXN1 PE=1 SV=1
Length = 1530
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
K+S++ L+ +H+ QF T GL+LYN + +DFI +EL
Sbjct: 935 KSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS--GDGNDFIVVELV 981
>sp|A1XQY1|NR3BA_DANRE Neurexin-3b OS=Danio rerio GN=nrxn3b PE=2 SV=1
Length = 1686
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
K S+L L+ + +H+ QF T G +L+N + +DFIA+EL
Sbjct: 880 KGSYLGLATLQAYSTMHLFFQFKTTSGDGFILFNS--GDGNDFIAVELV 926
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALEL 167
K+S++ + K R + +I LQ +T D+G+LLY G +D +ALEL
Sbjct: 1165 KDSYVELASAKVRPQANISLQVATDKDNGILLYKG----DNDPLALEL 1208
>sp|Q63374|NRX2A_RAT Neurexin-2 OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=3
Length = 1715
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
++S+L L+ +H+ QF T GLLL+N +DFI +EL
Sbjct: 928 RSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS--GNGNDFIVIELV 974
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALEL 167
K+S++ + K R + +I LQ +T D+G+LLY G +D +ALEL
Sbjct: 1165 KDSYVELASAKVRPQANISLQVATDKDNGILLYKG----DNDPLALEL 1208
>sp|Q9P2S2|NRX2A_HUMAN Neurexin-2 OS=Homo sapiens GN=NRXN2 PE=2 SV=1
Length = 1712
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 120 KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELT 168
++S+L L+ +H+ QF T GLLL+N +DFI +EL
Sbjct: 925 RSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS--GNGNDFIVIELV 971
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,286,337
Number of Sequences: 539616
Number of extensions: 3321860
Number of successful extensions: 6283
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 6161
Number of HSP's gapped (non-prelim): 161
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)