Query psy2060
Match_columns 193
No_of_seqs 194 out of 2072
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:12:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.6 5E-16 1.7E-20 111.9 6.4 82 23-114 26-120 (135)
2 4d90_A EGF-like repeat and dis 99.6 1.3E-15 4.4E-20 110.6 5.9 83 23-115 21-135 (143)
3 3asi_A Neurexin-1-alpha; beta- 99.6 2.4E-14 8.4E-19 120.6 13.4 117 64-190 179-304 (410)
4 3qcw_A Neurexin-1-alpha; synap 99.5 2.7E-14 9.2E-19 134.9 9.9 102 74-186 192-302 (1245)
5 2gy5_A Angiopoietin-1 receptor 99.5 5.6E-15 1.9E-19 125.1 4.5 149 24-190 215-407 (423)
6 1tpg_A T-plasminogen activator 99.5 1.1E-14 3.7E-19 98.0 4.7 80 24-114 1-87 (91)
7 1pz7_A Agrin; structural prote 99.4 3.9E-13 1.3E-17 103.1 8.6 83 108-192 7-105 (204)
8 1h30_A GAS6, growth-arrest-spe 99.4 1.6E-13 5.6E-18 116.1 6.2 112 53-191 2-116 (422)
9 3qcw_A Neurexin-1-alpha; synap 99.4 2.4E-12 8.3E-17 121.7 13.9 115 65-189 1012-1135(1245)
10 3pve_A Agrin, AGRN protein; mR 99.3 1.5E-11 5.1E-16 93.2 10.3 78 114-193 10-93 (189)
11 3v64_A Low-density lipoprotein 99.3 1.4E-11 4.7E-16 93.6 8.1 76 115-192 4-92 (191)
12 2vj2_A Jagged-1; signalling, p 99.2 3.9E-12 1.3E-16 94.9 3.8 80 24-113 82-169 (169)
13 2r16_A Neurexin-1-alpha; beta- 99.2 3E-11 1E-15 91.0 8.8 77 114-193 6-84 (182)
14 2bou_A EGF-like module contain 99.2 3.6E-12 1.2E-16 92.4 3.3 82 25-112 19-137 (143)
15 1z1y_A Ookinete surface protei 99.2 3.8E-12 1.3E-16 96.2 2.1 84 23-114 72-176 (186)
16 1d2s_A SHBG, sex hormone-bindi 99.2 1.8E-10 6.3E-15 85.8 10.3 74 116-193 8-83 (170)
17 3sh4_A LG3 peptide; actin disa 99.2 1.3E-10 4.5E-15 88.4 9.2 75 116-192 8-91 (195)
18 3asi_A Neurexin-1-alpha; beta- 99.1 2.9E-10 9.8E-15 95.7 11.1 70 115-188 7-77 (410)
19 1dx5_I Thrombomodulin; serine 99.1 2E-11 6.7E-16 85.8 3.2 81 17-105 16-111 (118)
20 2vj3_A Neurogenic locus notch 99.1 4.6E-11 1.6E-15 85.8 4.5 60 47-114 22-82 (135)
21 1z1y_A Ookinete surface protei 99.1 6.5E-12 2.2E-16 94.9 -0.2 88 23-114 23-137 (186)
22 2w86_A Fibrillin-1, fibrillin1 99.1 1.9E-11 6.5E-16 89.0 1.9 53 53-111 88-146 (147)
23 1yo8_A Thrombospondin-2; EGF, 99.1 9.1E-11 3.1E-15 103.3 5.7 92 16-113 16-146 (634)
24 3u7u_G Neuregulin 1; signaling 99.1 6.7E-11 2.3E-15 71.6 2.7 45 63-115 1-51 (55)
25 1f5f_A SHBG, sex hormone-bindi 99.1 1.1E-09 3.9E-14 83.8 10.3 68 122-193 28-95 (205)
26 2jd4_A Laminin subunit alpha-1 99.0 1.9E-09 6.4E-14 89.8 11.8 76 115-193 21-100 (383)
27 2r1b_A Neurexin-1-beta, neurex 99.0 1.6E-09 5.5E-14 83.9 9.9 74 115-190 12-90 (220)
28 2h0b_A Neurexin-1-alpha; B-san 99.0 1.4E-09 4.9E-14 81.7 9.3 67 115-186 7-76 (184)
29 3bod_A Neurexin-1-alpha; neure 99.0 2.7E-09 9.3E-14 79.9 10.1 73 115-189 6-83 (178)
30 2r1d_A Neurexin-1-beta, neurex 99.0 2.8E-09 9.7E-14 82.9 10.4 73 115-190 42-118 (226)
31 4fbr_A Lectin, myxobacterial h 99.0 2.3E-12 7.9E-17 102.0 -8.0 84 23-114 51-203 (267)
32 1dyk_A Laminin alpha 2 chain; 98.9 6.1E-09 2.1E-13 87.1 11.5 72 119-193 41-114 (394)
33 2w2n_E LDL receptor, low-densi 98.9 2.3E-10 8E-15 78.9 1.9 75 28-111 18-106 (107)
34 1emn_A Fibrillin; extracellula 98.9 8.7E-10 3E-14 72.3 3.7 52 47-104 20-75 (82)
35 1lmj_A Fibrillin 1; EGF, calci 98.9 4.3E-10 1.5E-14 74.5 1.9 59 47-111 19-85 (86)
36 4d90_A EGF-like repeat and dis 98.9 1.2E-09 4.2E-14 78.7 4.2 58 51-114 21-96 (143)
37 2wjs_A Laminin subunit alpha-2 98.9 1.3E-08 4.4E-13 89.7 11.3 73 115-190 12-85 (608)
38 2c4f_L Coagulation factor VII 98.9 5.7E-10 2E-14 80.7 1.9 67 44-114 57-130 (142)
39 2wjs_A Laminin subunit alpha-2 98.8 7.6E-09 2.6E-13 91.1 9.1 81 108-191 196-280 (608)
40 1nfu_B Coagulation factor XA, 98.8 5.6E-10 1.9E-14 84.8 1.3 66 44-115 52-123 (195)
41 1uzk_A Fibrillin-1; glycoprote 98.8 2.9E-10 1E-14 84.0 -0.3 79 24-112 74-162 (162)
42 2ygq_A WIF-1, WNT inhibitory f 98.8 3.1E-09 1.1E-13 86.9 5.6 74 24-113 164-244 (324)
43 1aut_L Activated protein C; se 98.8 2.3E-09 7.8E-14 74.7 3.3 64 47-114 29-95 (114)
44 1x7a_L Coagulation factor IX, 98.8 2.2E-09 7.7E-14 78.0 2.8 64 44-114 58-127 (146)
45 2vh0_B Activated factor XA lig 98.8 1.5E-09 5E-14 77.8 1.3 65 44-114 52-122 (134)
46 4fbr_A Lectin, myxobacterial h 98.8 6E-11 2E-15 93.9 -6.7 88 18-114 7-136 (267)
47 2ygq_A WIF-1, WNT inhibitory f 98.7 4.4E-09 1.5E-13 86.0 3.6 74 24-113 196-276 (324)
48 3h5c_B Vitamin K-dependent pro 98.7 1.2E-08 4E-13 82.9 4.9 61 47-113 20-84 (317)
49 2jd4_A Laminin subunit alpha-1 98.7 7.5E-08 2.6E-12 80.1 9.2 69 116-188 201-271 (383)
50 2gy5_A Angiopoietin-1 receptor 98.7 1.5E-08 5.1E-13 85.7 4.8 78 26-113 186-278 (423)
51 1edm_B Factor IX; epidermal gr 98.6 2.5E-08 8.4E-13 55.9 3.8 35 73-113 4-39 (39)
52 1z6c_A Vitamin K-dependent pro 98.6 1E-08 3.5E-13 67.9 2.5 49 47-103 19-72 (87)
53 3v65_B Low-density lipoprotein 98.5 4.1E-07 1.4E-11 75.7 8.4 61 47-114 18-84 (386)
54 3ca7_A Protein spitz; argos, E 98.5 1.2E-08 4.1E-13 61.0 -1.1 44 53-114 3-49 (52)
55 1dyk_A Laminin alpha 2 chain; 98.4 1E-06 3.5E-11 73.6 10.1 69 116-188 214-283 (394)
56 2wg3_C Hedgehog-interacting pr 98.4 4.9E-08 1.7E-12 83.5 1.5 72 26-114 378-456 (463)
57 3fcs_B Integrin beta-3; beta p 98.4 1.6E-07 5.4E-12 83.7 4.5 74 24-113 503-600 (690)
58 3fcs_B Integrin beta-3; beta p 98.4 9.1E-08 3.1E-12 85.2 2.9 70 27-112 460-559 (690)
59 1egf_A Epidermal growth factor 98.4 2.5E-07 8.5E-12 55.4 3.8 38 74-117 5-48 (53)
60 3p5b_L Low density lipoprotein 98.4 2.1E-07 7.2E-12 77.9 4.6 60 47-113 15-79 (400)
61 1tpg_A T-plasminogen activator 98.4 3E-07 1E-11 61.3 3.8 46 22-71 29-89 (91)
62 1yo8_A Thrombospondin-2; EGF, 98.3 3.3E-07 1.1E-11 80.8 4.8 58 47-112 18-85 (634)
63 1aut_L Activated protein C; se 98.3 2.9E-07 9.8E-12 63.9 3.4 63 18-88 29-109 (114)
64 1a3p_A Epidermal growth factor 98.3 3.3E-07 1.1E-11 52.9 2.8 35 74-114 2-42 (45)
65 2vj2_A Jagged-1; signalling, p 98.3 2.4E-07 8.3E-12 68.7 1.9 15 54-68 51-65 (169)
66 1h30_A GAS6, growth-arrest-spe 98.3 3E-06 1E-10 71.4 8.7 67 116-184 222-305 (422)
67 2bou_A EGF-like module contain 98.2 3.2E-07 1.1E-11 66.1 1.8 47 52-103 18-77 (143)
68 3k6s_B Integrin beta-2; cell r 98.2 4.5E-07 1.6E-11 80.6 3.1 74 26-113 494-592 (687)
69 1hae_A Heregulin-alpha; growth 98.2 4.3E-07 1.5E-11 56.3 1.4 35 74-114 8-48 (63)
70 2c4f_L Coagulation factor VII 98.1 2.4E-06 8.1E-11 61.5 3.9 54 23-79 66-140 (142)
71 2p28_B Integrin beta-2; hybrid 98.1 1.1E-06 3.7E-11 67.8 1.7 73 25-113 107-214 (217)
72 1nql_B Epidermal growth factor 98.1 8E-07 2.7E-11 53.1 0.7 34 77-116 12-47 (53)
73 1nfu_B Coagulation factor XA, 98.0 1.1E-06 3.8E-11 66.6 1.5 53 23-82 61-130 (195)
74 1n7d_A LDL receptor, low-densi 98.0 6.5E-06 2.2E-10 73.7 5.9 60 47-113 309-373 (699)
75 1dx5_I Thrombomodulin; serine 98.0 1.2E-06 4E-11 61.1 0.6 61 47-113 17-79 (118)
76 2k2s_B Micronemal protein 6; m 98.0 1.7E-06 5.7E-11 53.2 0.9 36 73-113 12-50 (61)
77 3m0c_C LDL receptor, low-densi 97.9 0.00015 5.1E-09 65.8 13.1 60 47-113 327-391 (791)
78 3k6s_B Integrin beta-2; cell r 97.9 1.4E-06 4.9E-11 77.4 -0.2 73 24-112 445-552 (687)
79 3ca7_A Protein spitz; argos, E 97.9 6.5E-07 2.2E-11 53.3 -1.9 39 26-69 4-49 (52)
80 2vh0_B Activated factor XA lig 97.9 3.2E-06 1.1E-10 60.2 1.3 46 23-70 61-123 (134)
81 4aqs_A Laminin subunit beta-1; 97.8 8E-06 2.7E-10 70.8 3.3 58 51-113 458-525 (525)
82 1k36_A Epiregulin; EGF-like fo 97.8 8.8E-06 3E-10 47.0 2.4 32 77-114 12-44 (46)
83 3u7u_G Neuregulin 1; signaling 97.8 6.1E-06 2.1E-10 49.5 1.8 24 48-71 29-52 (55)
84 1uzk_A Fibrillin-1; glycoprote 97.7 3.6E-06 1.2E-10 61.7 -0.4 60 47-112 18-90 (162)
85 1a3p_A Epidermal growth factor 97.7 2.1E-05 7.2E-10 45.1 2.7 29 42-70 11-43 (45)
86 1z6c_A Vitamin K-dependent pro 97.7 3.1E-05 1.1E-09 50.8 3.6 50 17-71 18-81 (87)
87 1emn_A Fibrillin; extracellula 97.6 2.9E-05 1E-09 50.4 2.8 45 17-65 19-77 (82)
88 1egf_A Epidermal growth factor 97.6 5.7E-05 1.9E-09 44.8 3.7 29 42-70 14-46 (53)
89 1lmj_A Fibrillin 1; EGF, calci 97.6 2.5E-05 8.7E-10 51.1 2.3 41 23-64 23-79 (86)
90 3zyj_B Netrin-G1; cell adhesio 97.6 2.2E-05 7.6E-10 65.9 2.3 74 24-114 312-399 (426)
91 1x7a_L Coagulation factor IX, 97.6 3.5E-05 1.2E-09 55.6 3.1 36 73-114 49-85 (146)
92 3ltf_D Protein spitz; receptor 97.6 1.6E-05 5.5E-10 48.3 0.9 33 78-115 15-50 (58)
93 1hae_A Heregulin-alpha; growth 97.6 2.7E-05 9.1E-10 48.0 1.9 26 49-76 28-53 (63)
94 1edm_B Factor IX; epidermal gr 97.6 2.8E-05 9.5E-10 43.0 1.8 27 42-68 11-39 (39)
95 1nql_B Epidermal growth factor 97.5 4E-05 1.4E-09 45.6 1.6 29 42-70 14-46 (53)
96 1q4g_A Prostaglandin G/H synth 97.4 5.5E-05 1.9E-09 65.9 2.3 36 73-114 3-41 (553)
97 1g1s_A P-selectin; selectin, l 97.4 4.1E-05 1.4E-09 55.8 1.2 36 74-115 121-157 (162)
98 3nt1_A Prostaglandin-endoperox 97.3 7.1E-05 2.4E-09 65.5 2.3 37 73-114 2-40 (587)
99 2fd6_A Urokinase-type plasmino 97.2 0.00017 5.8E-09 50.4 2.9 57 42-114 3-64 (122)
100 2k2s_B Micronemal protein 6; m 97.0 0.00016 5.4E-09 44.3 0.6 23 47-69 28-51 (61)
101 2ygo_A WIF-1, WNT inhibitory f 97.0 0.00046 1.6E-08 51.5 3.1 39 63-114 143-181 (188)
102 3h5c_B Vitamin K-dependent pro 97.0 0.00031 1.1E-08 56.6 2.4 34 73-112 6-40 (317)
103 1k36_A Epiregulin; EGF-like fo 96.9 0.00033 1.1E-08 40.3 1.5 20 50-69 25-44 (46)
104 2w86_A Fibrillin-1, fibrillin1 96.9 0.00038 1.3E-08 49.9 2.1 40 68-112 2-42 (147)
105 1g1t_A E-selectin; EGF, adhesi 96.8 0.00027 9.2E-09 51.0 0.9 35 74-114 121-156 (157)
106 3v65_B Low-density lipoprotein 96.7 0.00033 1.1E-08 58.0 0.7 45 21-68 20-83 (386)
107 1klo_A Laminin; glycoprotein; 96.7 0.0013 4.3E-08 48.2 3.7 60 52-119 74-152 (162)
108 3e50_C Protransforming growth 96.7 0.0014 4.7E-08 38.3 3.0 32 77-114 14-46 (50)
109 1apq_A Complement protease C1R 96.6 0.0016 5.5E-08 38.1 3.2 31 78-112 21-51 (53)
110 2fd6_A Urokinase-type plasmino 96.5 0.0011 3.9E-08 46.1 2.4 32 78-114 2-35 (122)
111 2p28_B Integrin beta-2; hybrid 96.5 0.00044 1.5E-08 53.1 0.2 52 53-114 107-176 (217)
112 3ltf_D Protein spitz; receptor 96.4 0.00043 1.5E-08 41.8 -0.2 37 28-69 7-49 (58)
113 4aqs_A Laminin subunit beta-1; 96.4 0.0017 5.7E-08 56.2 3.2 39 74-117 437-479 (525)
114 2rnl_A Amphiregulin; AR, color 96.3 0.0029 9.9E-08 36.9 3.0 31 77-113 18-49 (50)
115 3cfw_A L-selectin; EGF, cell a 96.3 0.0019 6.5E-08 46.8 2.7 35 74-114 121-156 (164)
116 2jkh_L Factor X light chain; p 96.3 0.0018 6.3E-08 38.4 2.0 37 74-114 3-42 (55)
117 1iox_A Betacellulin; EGF-like 96.3 0.0016 5.6E-08 38.0 1.6 33 77-115 14-47 (50)
118 2wg3_C Hedgehog-interacting pr 96.1 0.00075 2.5E-08 57.5 -0.7 48 53-114 377-424 (463)
119 2w2n_E LDL receptor, low-densi 96.1 0.0029 9.9E-08 43.0 2.4 48 57-113 18-68 (107)
120 1xdt_R Hbegf, heparin-binding 96.1 0.0018 6.1E-08 41.4 1.2 32 77-114 46-78 (79)
121 3e50_C Protransforming growth 96.0 0.0034 1.2E-07 36.6 2.1 21 49-69 26-46 (50)
122 1gl4_A Nidogen-1, entactin; im 96.0 0.0015 5.3E-08 51.9 0.7 37 73-113 6-45 (285)
123 1szb_A Mannose binding lectin- 95.9 0.0024 8.1E-08 46.8 1.2 49 59-113 113-167 (170)
124 1iox_A Betacellulin; EGF-like 95.8 0.0026 9E-08 37.1 1.1 22 48-69 25-46 (50)
125 2i9a_A Urokinase-type plasmino 95.8 0.0045 1.5E-07 44.4 2.4 32 78-114 14-47 (145)
126 2i9a_A Urokinase-type plasmino 95.8 0.0083 2.8E-07 43.0 3.7 58 41-114 14-76 (145)
127 1g1s_A P-selectin; selectin, l 95.7 0.0026 8.8E-08 46.0 0.9 23 47-69 134-156 (162)
128 1kli_L Factor VIIA; extrinsic 95.2 0.011 3.7E-07 36.8 2.4 37 74-114 7-47 (69)
129 2rnl_A Amphiregulin; AR, color 95.1 0.022 7.5E-07 33.1 3.5 21 48-68 29-49 (50)
130 1kig_L Factor XA; glycoprotein 94.6 0.011 3.7E-07 34.4 1.1 34 77-114 6-39 (51)
131 3p5b_L Low density lipoprotein 94.5 0.015 5.1E-07 48.3 2.2 37 74-113 2-39 (400)
132 2kl7_A Fibulin-4; secreted, ca 94.4 0.044 1.5E-06 34.2 3.7 30 74-104 5-37 (71)
133 2jkh_L Factor X light chain; p 93.6 0.02 6.8E-07 33.8 0.9 21 47-67 16-40 (55)
134 1q4g_A Prostaglandin G/H synth 93.5 0.021 7.2E-07 49.7 1.2 30 41-70 9-42 (553)
135 2bz6_L Blood coagulation facto 92.9 0.046 1.6E-06 32.0 1.7 33 78-114 8-41 (53)
136 2wph_E Coagulation factor IXA 92.9 0.079 2.7E-06 31.7 2.8 22 47-68 14-40 (59)
137 2ygo_A WIF-1, WNT inhibitory f 92.8 0.056 1.9E-06 40.2 2.5 27 42-69 155-181 (188)
138 1apq_A Complement protease C1R 92.6 0.037 1.3E-06 32.0 1.0 17 47-63 27-43 (53)
139 1nzi_A Complement C1S componen 92.5 0.049 1.7E-06 39.0 1.8 48 59-112 106-157 (159)
140 1xdt_R Hbegf, heparin-binding 92.3 0.031 1.1E-06 35.6 0.5 20 50-69 59-78 (79)
141 4aqt_A Laminin subunit gamma-1 92.1 0.043 1.5E-06 45.4 1.2 22 48-69 267-288 (375)
142 3v64_C Agrin; beta propeller, 92.0 1 3.6E-05 36.2 9.4 36 74-113 3-40 (349)
143 1ob1_C Major merozoite surface 91.9 0.16 5.3E-06 33.8 3.5 53 49-103 22-83 (99)
144 3nt1_A Prostaglandin-endoperox 91.7 0.041 1.4E-06 48.1 0.7 29 41-69 8-40 (587)
145 1g1t_A E-selectin; EGF, adhesi 91.6 0.033 1.1E-06 39.7 -0.0 23 47-69 134-156 (157)
146 2wph_E Coagulation factor IXA 91.5 0.11 3.7E-06 31.1 2.2 34 78-114 8-41 (59)
147 3zyj_B Netrin-G1; cell adhesio 91.2 0.099 3.4E-06 43.9 2.5 58 50-113 310-368 (426)
148 3cfw_A L-selectin; EGF, cell a 91.0 0.065 2.2E-06 38.5 1.1 23 47-69 134-156 (164)
149 1kli_L Factor VIIA; extrinsic 90.0 0.087 3E-06 32.6 0.8 22 47-68 20-46 (69)
150 1klo_A Laminin; glycoprotein; 89.7 0.16 5.6E-06 36.7 2.2 37 78-119 2-40 (162)
151 1n7d_A LDL receptor, low-densi 89.3 0.27 9.3E-06 43.8 3.8 27 83-112 306-332 (699)
152 3m0c_C LDL receptor, low-densi 89.0 0.27 9.2E-06 44.5 3.6 36 74-112 309-350 (791)
153 2e26_A Reelin, reeler protein; 87.7 0.077 2.6E-06 47.3 -0.8 46 55-113 520-565 (725)
154 1ob1_C Major merozoite surface 87.3 0.37 1.3E-05 31.9 2.5 53 16-68 17-94 (99)
155 1n1i_A Merozoite surface prote 87.3 0.87 3E-05 30.4 4.3 52 48-103 27-84 (105)
156 2p26_A Integrin beta-2; hybrid 84.0 0.42 1.4E-05 37.9 1.8 54 54-113 208-275 (280)
157 1gl4_A Nidogen-1, entactin; im 82.1 0.38 1.3E-05 38.1 0.9 22 47-68 22-45 (285)
158 4aqt_A Laminin subunit gamma-1 78.0 1.3 4.3E-05 36.6 2.7 22 22-45 269-291 (375)
159 3t5o_A Complement component C6 77.0 1.1 3.7E-05 41.3 2.2 36 73-114 498-534 (913)
160 3fby_A COMP, cartilage oligome 76.9 1.4 4.6E-05 38.1 2.7 34 77-113 27-60 (551)
161 1ijq_A LDL receptor, low-densi 76.7 1.8 6.1E-05 34.1 3.2 28 84-112 283-315 (316)
162 2y38_A Laminin subunit alpha-5 75.8 2.2 7.7E-05 35.4 3.7 64 53-120 286-380 (403)
163 3sov_A LRP-6, low-density lipo 75.4 2.2 7.4E-05 33.9 3.4 33 78-113 276-309 (318)
164 2y38_A Laminin subunit alpha-5 74.9 1.7 5.7E-05 36.2 2.6 24 80-103 354-379 (403)
165 4a0p_A LRP6, LRP-6, low-densit 74.0 8.8 0.0003 33.6 7.2 37 74-113 267-306 (628)
166 1szb_A Mannose binding lectin- 73.4 0.82 2.8E-05 32.9 0.4 21 47-67 142-166 (170)
167 1nzi_A Complement C1S componen 72.4 1.2 4.1E-05 31.5 1.1 21 47-67 133-157 (159)
168 3f1s_B Vitamin K-dependent pro 72.3 1.4 4.7E-05 34.4 1.5 32 78-113 12-43 (283)
169 1n1i_A Merozoite surface prote 70.6 3.1 0.00011 27.7 2.7 46 23-68 30-95 (105)
170 3v64_C Agrin; beta propeller, 69.9 2 6.7E-05 34.5 2.0 28 84-114 317-344 (349)
171 3s94_A LRP-6, low-density lipo 65.5 2.3 8E-05 37.2 1.7 35 74-112 580-617 (619)
172 2e26_A Reelin, reeler protein; 65.0 1.7 5.7E-05 38.8 0.6 38 28-69 522-566 (725)
173 3s94_A LRP-6, low-density lipo 54.3 56 0.0019 28.3 8.5 33 78-113 281-314 (619)
174 3t5o_A Complement component C6 53.3 6.8 0.00023 36.0 2.6 31 39-69 502-534 (913)
175 1lr7_A Follistatin, FS1; hepar 52.2 12 0.00041 22.8 2.9 27 73-100 2-29 (74)
176 3f1s_B Vitamin K-dependent pro 43.1 8.3 0.00029 29.8 1.3 22 47-68 18-43 (283)
177 3fl7_A Ephrin receptor; ATP-bi 38.9 15 0.00051 31.6 2.3 38 26-63 264-320 (536)
178 3fl7_A Ephrin receptor; ATP-bi 38.0 9.4 0.00032 32.8 0.9 44 53-103 263-319 (536)
179 4a0p_A LRP6, LRP-6, low-densit 36.5 18 0.0006 31.6 2.4 28 84-112 592-619 (628)
180 3t3p_B Integrin beta-3; integr 35.7 11 0.00036 32.1 0.8 14 54-67 459-472 (472)
181 3nsj_A Perforin-1; pore formin 32.2 2.4E+02 0.0082 24.1 10.5 35 73-113 351-389 (540)
182 1b9w_A Protein (merozoite surf 30.6 73 0.0025 20.6 4.0 52 50-103 23-79 (95)
183 3ojy_B Complement component C8 28.7 26 0.00088 30.1 2.1 36 73-114 447-483 (537)
184 3v4v_B Integrin beta-7; cell a 28.0 12 0.00043 31.9 0.0 19 50-68 473-494 (503)
185 2pe4_A Hyaluronidase-1; hyalur 27.4 20 0.00069 29.8 1.1 19 51-69 395-413 (424)
186 3tje_F Tumor necrosis factor r 24.6 40 0.0014 23.9 2.2 63 28-103 47-118 (156)
187 1nub_A Basement membrane prote 24.3 46 0.0016 25.1 2.6 25 73-98 4-29 (229)
188 2arp_F Follistatin; cystine kn 24.2 52 0.0018 23.0 2.7 27 73-100 4-31 (152)
189 3hh2_C Follistatin; protein-pr 24.2 62 0.0021 25.4 3.4 27 73-100 64-91 (288)
190 2v73_A CBM40, putative EXO-alp 21.7 2.4E+02 0.0082 20.6 9.0 49 129-179 36-85 (191)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.62 E-value=5e-16 Score=111.95 Aligned_cols=82 Identities=16% Similarity=0.346 Sum_probs=72.9
Q ss_pred CCcee-cCCCCccCCCCcceeec---------CC--ccCCCCceeeCCCCCCCCcccccCCCCCCC-CCCCCCcEEeeCC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTFVD---------GG--HRTLDLLHDMGARYHWGDTCETDITKSDCK-GVCSPGATCSLNP 89 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~~~---------gg--~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg~C~~~~ 89 (193)
+.|.| |++||+|.. |++++| +| .+..++|.|.|++||+|..|+..++ +|. .||.++++|++..
T Consensus 26 g~~~C~C~~Gy~G~~--C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~--~C~~~~C~~~g~C~~~~ 101 (135)
T 2vj3_A 26 GSFECQCLQGYTGPR--CEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTD--ECASSPCLHNGRCLDKI 101 (135)
T ss_dssp SSEEEECCTTEESTT--SCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECC--TTTTCCSTTTCEEEECS
T ss_pred CCEEEECCCCCcCCc--ccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCC--cccCCCcCCCCEeECCC
Confidence 56889 999999997 987765 34 6778899999999999999998876 999 9999999999987
Q ss_pred CCceecccCCCCCCcccccccccee
Q psy2060 90 SGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 90 ~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++|+|. |++||. |..|+..
T Consensus 102 -g~~~C~-C~~G~~----G~~C~~~ 120 (135)
T 2vj3_A 102 -NEFQCE-CPTGFT----GHLCQVD 120 (135)
T ss_dssp -SCEEEE-CCTTEE----SSSSCEE
T ss_pred -CCeEEE-CCCCCc----CCccCcc
Confidence 999999 999998 9999764
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=110.58 Aligned_cols=83 Identities=19% Similarity=0.358 Sum_probs=70.1
Q ss_pred CCcee-cCCCCccCCCCcce---------------------eecCC--c-------cCCCCceeeCCCCCCCCcccccCC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQT---------------------FVDGG--H-------RTLDLLHDMGARYHWGDTCETDIT 71 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~---------------------~~~gg--~-------~~~~~~~C~C~~g~~G~~C~~~~~ 71 (193)
+.|.| |++||+|.. |+. +.++| . ++.++|.|.|++||+|..|+.+++
T Consensus 21 g~~~C~C~~G~~G~~--C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~ 98 (143)
T 4d90_A 21 GSFSCECPDGFTDPN--CSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNIN 98 (143)
T ss_dssp -CCEEECCTTCCTTT--TCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECC
T ss_pred CCEEeECCCCCCCCC--CccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCC
Confidence 57899 999999997 875 11244 3 566899999999999999998876
Q ss_pred CCCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccceec
Q psy2060 72 KSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 72 ~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
+|. +||.++++|++.. ++|+|. |++||. |..|+...
T Consensus 99 --~C~~~~C~~~~~C~~~~-g~~~C~-C~~G~~----G~~c~~~~ 135 (143)
T 4d90_A 99 --ECEVEPCKNGGICTDLV-ANYSCE-CPGEFM----GRNCQYKG 135 (143)
T ss_dssp --TTTTCCSCTTCEEEEET-TEEEEE-CCTTCB----STTSCBC-
T ss_pred --cCCCCCCCCCCEeECCC-CCeEeE-CCCCCc----cCCceecC
Confidence 999 9999999999987 999999 999999 99997653
No 3
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.57 E-value=2.4e-14 Score=120.65 Aligned_cols=117 Identities=21% Similarity=0.432 Sum_probs=91.9
Q ss_pred CcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCC-CCCccccccccceec--ccCC-CcceEEecCCCC----Cce
Q psy2060 64 DTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSL-AGSYEHYDRLCRLRA--RSFP-KNSFLTFPALKQ----RNR 134 (193)
Q Consensus 64 ~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~-g~~~~~~g~~C~~~~--~sF~-g~syl~~~~~~~----~~~ 134 (193)
..|+...+ .|. +||.|+|+|++.+ .+|.|. |+. +|. |+.|+... ..|. +.+|+.|..... ...
T Consensus 179 ~gC~~~~~--~C~~~pC~n~g~C~~~~-~~~~C~-C~~~~~~----G~~C~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (410)
T 3asi_A 179 RGCEGPST--TCQEDSCSNQGVCLQQW-DGFSCD-CSMTSFS----GPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRA 250 (410)
T ss_dssp ESCCCCSS--CCCTTSSSTTCEEEECS-SSEEEE-CTTTSEE----STTSCEECCEEEEEEEEEEEEEECCTTCCCCBSE
T ss_pred CCCCCCCC--CcccccCCCCCEecCCC-CCceEe-ccCCccc----CCCCCCCcccccccCCCceEEEecCCCCCcccee
Confidence 34654433 899 9999999999987 999999 986 787 99998753 3453 678887743221 223
Q ss_pred eEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcC
Q psy2060 135 LHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRA 190 (193)
Q Consensus 135 ~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~ 190 (193)
..++|.|+|..++|+|||.+......||++|+|.+|+ |+++|++|++...++++
T Consensus 251 ~~i~l~frT~~~~GlLl~~~~~~~~~~~l~l~L~~G~--l~~~~~~g~~~~~~~~~ 304 (410)
T 3asi_A 251 DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGK--IGVKFNVGTDDIAIEES 304 (410)
T ss_dssp EEEEEEEECCCSEEEEEEEEECTTCCCEEEEEEETTE--EEEEEESSSSCEEEECC
T ss_pred eEEEEEEEeCCCCEEEEEEecCCCCCceEEEEEeCCE--EEEEEECCCCceEEecC
Confidence 5799999999999999997642345799999999999 99999999987777754
No 4
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.52 E-value=2.7e-14 Score=134.91 Aligned_cols=102 Identities=27% Similarity=0.546 Sum_probs=57.6
Q ss_pred CCC-CCCCCCcEEeeCCCCceecccCCC-CCCccccccccce----ecccCCCcceEEecCCCC---CceeEEEEEEEeC
Q psy2060 74 DCK-GVCSPGATCSLNPSGGYICDDCSL-AGSYEHYDRLCRL----RARSFPKNSFLTFPALKQ---RNRLHIKLQFSTL 144 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~~~~~~C~~C~~-g~~~~~~g~~C~~----~~~sF~g~syl~~~~~~~---~~~~~i~~~f~T~ 144 (193)
+|. .||.|||+|+... ++|.|. |+. +|. |+.|+. ..+.|.|.+|+.|+.... .....|+|.|+|.
T Consensus 192 ~~~~~~C~ngg~C~~~~-~~~~C~-C~~~g~~----G~~Ce~~~~~~~~~F~G~~~~~y~~~~~~~~~~~~~i~l~FrT~ 265 (1245)
T 3qcw_A 192 EGEGGVCLNGGVCSVVD-DQAVCD-CSRTGFR----GKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTL 265 (1245)
T ss_dssp ---------------------------------------------CCEEEECSSCEEEEECTTSCEEESEEEEEEEEECS
T ss_pred cCCCCCCCCCCCCccCC-CCceeE-CCCCCcc----CCccccCcccceeeeCCcEEEEEccccCcccccccEEEEEEEeC
Confidence 688 9999999999876 889999 996 777 999995 356899999999975543 2346899999999
Q ss_pred CCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEE
Q psy2060 145 HDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVAR 186 (193)
Q Consensus 145 ~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~ 186 (193)
.++|+|||.+ ...||++|+|.+|+ |+++|++|+|..+
T Consensus 266 ~~~GlLl~~g---~~~d~l~L~L~~G~--l~l~~~lG~g~~~ 302 (1245)
T 3qcw_A 266 QRNGLMLHTG---KSADYVNLALKNGA--VSLVINLGSGAFE 302 (1245)
T ss_dssp CSCEEEEEEC---SSSEEEEEEEETTE--EEEEEEESSCCEE
T ss_pred CCCceEEEec---CCCCEEEEEEECCE--EEEEEEcCCCeEE
Confidence 9999999985 46899999999999 9999999998764
No 5
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.52 E-value=5.6e-15 Score=125.10 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=102.2
Q ss_pred Ccee-cCCCCccCCCCcceeec--------------CC--c----cCCCCceeeCCCCCCCCcccccCC----CCCCC--
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFVD--------------GG--H----RTLDLLHDMGARYHWGDTCETDIT----KSDCK-- 76 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~~--------------gg--~----~~~~~~~C~C~~g~~G~~C~~~~~----~~~C~-- 76 (193)
.+.| |++||+|.. |+...+ .+ . -..+.|.|.|++||+|.+|+..-. ...|.
T Consensus 215 ~g~C~C~~G~~G~~--Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~ 292 (423)
T 2gy5_A 215 TGECICPPGFMGRT--CEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLR 292 (423)
T ss_dssp TCCEECCTTEESTT--SCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCB
T ss_pred CCcEeCCCCccCCC--cccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCccccc
Confidence 5789 999999998 986321 11 1 134689999999999999986211 12455
Q ss_pred CCCCCCcEEeeCCCCceecccCCCCCCccccccccceec-----ccCC-CcceEEecC-----------CCCCceeEEEE
Q psy2060 77 GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRA-----RSFP-KNSFLTFPA-----------LKQRNRLHIKL 139 (193)
Q Consensus 77 ~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~~-----~sF~-g~syl~~~~-----------~~~~~~~~i~~ 139 (193)
-+|.++++|.+.. .|. |+++|. |..|+... +.|. ..+++.+.. ..... .+++
T Consensus 293 C~C~ngg~C~~~~----~C~-C~~G~~----G~~Ce~~~~~~~~~~~~~~~~~~~c~~g~~g~~C~~~~~~~~~--~~~~ 361 (423)
T 2gy5_A 293 CSCNNGEMCDRFQ----GCL-CSPGWQ----GLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPT--NEEM 361 (423)
T ss_dssp CCCTTCCEEETTT----EEE-CCTTCB----STTSCBCSSCCCCCEECSCCSBCCEESEEECCEEEEECTTCCC--GGGE
T ss_pred ccCCCCCEecCCC----ceE-CCCCCc----CCCCccCccCCcCcceecCCCeEEeCCCccCCcccccCCcCCC--CceE
Confidence 3899999998553 499 999999 99998752 2221 223332211 00111 1122
Q ss_pred EEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcC
Q psy2060 140 QFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRA 190 (193)
Q Consensus 140 ~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~ 190 (193)
.| ..++|+++|.+. ....||++|+|.+|+ ++++|++|+.+..+++.
T Consensus 362 ~~--~~~~G~cl~~~~-~~~~d~ial~l~~G~--v~~syd~G~~~~~v~t~ 407 (423)
T 2gy5_A 362 TL--VKPDGTVLHPKD-FNHTDHFSVAIFTIH--RILPPDSGVWVCSVNTV 407 (423)
T ss_dssp EE--ECTTSCEECCSE-EEECSSCEEEECCEE--EECGGGCEEEEEEEEET
T ss_pred EE--ECCCeEEEeCCC-cCcccceeeeEEeee--EEEeecCCCcceEEEec
Confidence 22 478999999854 235799999999999 99999999888877764
No 6
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.51 E-value=1.1e-14 Score=98.02 Aligned_cols=80 Identities=15% Similarity=0.289 Sum_probs=65.1
Q ss_pred Ccee-cCCCCccCCCCcceeec-CC--ccCCCCceeeCCCCCCCCccc-ccCCCCCCC-CCCCCCcEEeeCC-CCceecc
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFVD-GG--HRTLDLLHDMGARYHWGDTCE-TDITKSDCK-GVCSPGATCSLNP-SGGYICD 96 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~~-gg--~~~~~~~~C~C~~g~~G~~C~-~~~~~~~C~-~pC~~gg~C~~~~-~~~~~C~ 96 (193)
.|.| |++||+|.. |+++.- .. .+..++|.|.|++||+ .|+ .+++ +|. +||.|+|+|++.. .++|+|.
T Consensus 1 sy~C~C~~g~~g~~--c~~~~c~~~pC~n~~~~y~C~C~~G~~--~C~~~~~~--~C~~~pC~ngg~C~~~~~~~~~~C~ 74 (91)
T 1tpg_A 1 SYQVICRDEKTQMI--YQQHQSWLRPVLRSNRVEYCWCNSGRA--QCHSVPVK--SCSEPRCFNGGTCQQALYFSDFVCQ 74 (91)
T ss_dssp CCCCCCBCSSSCCB--CCSSCEEEEECSSSSCEEEEECSSSCC--BCCEECEE--ECSSCCSCTTCEEEEESSSSCEEEE
T ss_pred CeeeECCCCCcCCe--ECCCcccCCccccCCCCcEeECCCCCc--ccccCcCC--cccCCCCCCCCEeecCCCCCCeEeE
Confidence 4788 999999997 854321 11 5667899999999998 998 4655 999 9999999999863 3889999
Q ss_pred cCCCCCCcccccccccee
Q psy2060 97 DCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 97 ~C~~g~~~~~~g~~C~~~ 114 (193)
|++||. |..|+..
T Consensus 75 -C~~G~~----G~~Ce~~ 87 (91)
T 1tpg_A 75 -CPEGFA----GKSCEID 87 (91)
T ss_dssp -CCTTCB----SSSCCBC
T ss_pred -CCCCCc----CCcCCcC
Confidence 999998 9999854
No 7
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.43 E-value=3.9e-13 Score=103.15 Aligned_cols=83 Identities=27% Similarity=0.399 Sum_probs=69.9
Q ss_pred ccccceecccCCCcceEEecCCC----------------CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCe
Q psy2060 108 DRLCRLRARSFPKNSFLTFPALK----------------QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSG 171 (193)
Q Consensus 108 g~~C~~~~~sF~g~syl~~~~~~----------------~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~ 171 (193)
++.|+....+|.|.+|+.|+... .....+|+|+|||..++|+|||++......||++|+|.+|+
T Consensus 7 ~~~~~~~~~~F~G~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~dfl~l~L~~G~ 86 (204)
T 1pz7_A 7 KAAGDAEAIAFDGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDGF 86 (204)
T ss_dssp CTTSSSCCEEEESSCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESCCSTTCCEEEEEEETTE
T ss_pred cccccccceeECCceeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCCCCCCCCeEEEEEECCE
Confidence 78899989999999999997542 12467899999999999999999642246799999999999
Q ss_pred eEEEEEEeCCCceEEEEcCCC
Q psy2060 172 RSVQFSWSLGSEVARLNRADS 192 (193)
Q Consensus 172 ~~l~~~~~~g~g~~~l~s~~~ 192 (193)
|+++|++|+++.+|+++..
T Consensus 87 --l~~~~~~G~g~~~v~s~~~ 105 (204)
T 1pz7_A 87 --VQMMYDLGSKPVVLRSTVP 105 (204)
T ss_dssp --EEEEEESSSCCEEEEEEEE
T ss_pred --EEEEEECCCCeEEEECCcc
Confidence 9999999999888876543
No 8
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.41 E-value=1.6e-13 Score=116.09 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=76.7
Q ss_pred ceeeCCCCCCCCcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCC-CCccccccccceecccCCCcceEEecCCC
Q psy2060 53 LHDMGARYHWGDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLA-GSYEHYDRLCRLRARSFPKNSFLTFPALK 130 (193)
Q Consensus 53 ~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g-~~~~~~g~~C~~~~~sF~g~syl~~~~~~ 130 (193)
..|.| +|++|..|+ |. ++|.++..|++.. . .. |+.. |. ..+|.+.+|+.++...
T Consensus 2 ~~C~C-~~~~g~~~~-------~~~~~C~~~~~C~p~~-~---~~-~~~~~~~-----------~~~F~g~~~~~~~f~~ 57 (422)
T 1h30_A 2 PLAHC-DGRGGLKLS-------QDMDTCEDILPCVPFS-V---AK-SVKSLYL-----------GRMFSGTPVIRLRFKR 57 (422)
T ss_dssp ---CC-CGGGTEEEE-------TTTTEEEECCCSSCBC-C---CE-ETTEEEC-----------CC-----CCEEEECCB
T ss_pred CeeEc-CCCCccccc-------cccCcCCCCCccCCcc-c---cc-Cccccee-----------eeEECCCceEEEEccC
Confidence 36999 789998774 44 6777777777654 2 22 3232 11 2578888787764322
Q ss_pred C-CceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcCC
Q psy2060 131 Q-RNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRAD 191 (193)
Q Consensus 131 ~-~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~~ 191 (193)
. ....+|+|+|||..++|+|||.+. ....||++|+|.+|+ |+++|++|++...+.++.
T Consensus 58 ~~~~~~~is~~FrT~~~~GlLly~~~-~~~~df~~l~L~~G~--l~~~~~~g~~~~~~~~~~ 116 (422)
T 1h30_A 58 LQPTRLVAEFDFRTFDPEGILLFAGG-HQDSTWIVLALRAGR--LELQLRYNGVGRVTSSGP 116 (422)
T ss_dssp SSCCCCEEEEEEEECCSSEEEEEEES-CTTSEEEEEEEETTE--EEEEEEETTEEEEEEEEE
T ss_pred CCCCceEEEEEEEeCCCCeEEEEECC-CCCCcEEEEEEECCE--EEEEEECCCCcEEEecCc
Confidence 2 456789999999999999999974 345799999999999 999999999887776543
No 9
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.40 E-value=2.4e-12 Score=121.66 Aligned_cols=115 Identities=21% Similarity=0.427 Sum_probs=89.3
Q ss_pred cccccCCCCCCC-CCCCCCcEEeeCCCCceecccCC-CCCCccccccccceecc--cC-CCcceEEecCCCC----Ccee
Q psy2060 65 TCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCS-LAGSYEHYDRLCRLRAR--SF-PKNSFLTFPALKQ----RNRL 135 (193)
Q Consensus 65 ~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~-~g~~~~~~g~~C~~~~~--sF-~g~syl~~~~~~~----~~~~ 135 (193)
.|....+ .|. +||.|+|+|++.+ .+|.|. |+ .+|. |+.|+.... .| .+.+++.|..... ....
T Consensus 1012 gC~~~~~--~C~~~pC~ngG~C~~~~-~~~~C~-C~~~g~~----G~~C~~~~~~~~f~~~~~~v~y~~~~~~~~~~~~~ 1083 (1245)
T 3qcw_A 1012 GCEGPST--TCQEDSCSNQGVCLQQW-DGFSCD-CSMTSFS----GPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRAD 1083 (1245)
T ss_dssp SSSCCCC--CCCTTSSSSSCEEEEET-TEEEEE-CTTSSCB----STTSCBCCCEEEEEEEEEEEEEECCTTCCCCBSEE
T ss_pred eeecccC--ceECCcCCCCCEeCCCC-CCCEEE-CCCCCCC----CCCccCCCceEEEcCCCcEEEEecCCCCccccccc
Confidence 4554433 899 9999999999998 999999 99 5888 999987543 24 3457777642211 2235
Q ss_pred EEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEc
Q psy2060 136 HIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNR 189 (193)
Q Consensus 136 ~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s 189 (193)
.|+|.|+|+.++|+||+.+......||++|+|.+|+ |+++|++|++...+..
T Consensus 1084 ~i~l~FrT~~~~g~Ll~~~s~~~~~~~l~l~l~~G~--l~~~~~~g~~~~~~~~ 1135 (1245)
T 3qcw_A 1084 RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGK--IGVKFNVGTDDIAIEE 1135 (1245)
T ss_dssp EEEEEEEBCCSSEEEEEEEECTTCCCEEEEEEETTE--EEEEEESSSCCEEEEC
T ss_pred eEEEEEEEcCCCeEEEEEeccCCCCceEEEEEECCE--EEEEEECCCCceEEec
Confidence 799999999999999998642334799999999999 9999999988776653
No 10
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.30 E-value=1.5e-11 Score=93.19 Aligned_cols=78 Identities=28% Similarity=0.539 Sum_probs=64.8
Q ss_pred ecccCCCcceEEecCCCC-----CceeEEEEEEEeCCCCeEEEEeecC-CCCCceEEEEecCCeeEEEEEEeCCCceEEE
Q psy2060 114 RARSFPKNSFLTFPALKQ-----RNRLHIKLQFSTLHDSGLLLYNGRY-NERHDFIALELTDSGRSVQFSWSLGSEVARL 187 (193)
Q Consensus 114 ~~~sF~g~syl~~~~~~~-----~~~~~i~~~f~T~~~~glLl~~g~~-~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l 187 (193)
.+++|.+.+|++++.... .....|+|+|||..++|+|||.+.. ....||++|+|.+|+ |+++|++|+++.++
T Consensus 10 ~~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~--l~~~~~~G~g~~~l 87 (189)
T 3pve_A 10 FLADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRH--LEFRYDLGKGAAII 87 (189)
T ss_dssp CCEEEESSCEEEECCGGGC-------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTE--EEEEEESSSCEEEE
T ss_pred eeeEECCCceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCE--EEEEEecCCCCEEE
Confidence 357899999999997753 3457899999999999999999741 246799999999999 99999999999999
Q ss_pred EcCCCC
Q psy2060 188 NRADSI 193 (193)
Q Consensus 188 ~s~~~i 193 (193)
+++.+|
T Consensus 88 ~s~~~l 93 (189)
T 3pve_A 88 RSKEPI 93 (189)
T ss_dssp ECSSCC
T ss_pred EcCccc
Confidence 887654
No 11
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.26 E-value=1.4e-11 Score=93.56 Aligned_cols=76 Identities=26% Similarity=0.464 Sum_probs=63.2
Q ss_pred cccCCCcceEEecCCC-------------CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCC
Q psy2060 115 ARSFPKNSFLTFPALK-------------QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLG 181 (193)
Q Consensus 115 ~~sF~g~syl~~~~~~-------------~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g 181 (193)
..+|.|.+|+.|+... .....+|+|+|+|..++|+|||.+......||++|+|.+|+ |+++|++|
T Consensus 4 ~~~F~G~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~d~l~l~L~~G~--l~~~~~~G 81 (191)
T 3v64_A 4 TLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGKAAERADYMALAIVDGH--LQLSYDLG 81 (191)
T ss_dssp EEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESCCSTTCCEEEEEEETTE--EEEEEESS
T ss_pred cceecCceeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCCCCCCCcEEEEEEECCE--EEEEEECC
Confidence 4679999999997531 24557899999999999999999642346799999999999 99999999
Q ss_pred CceEEEEcCCC
Q psy2060 182 SEVARLNRADS 192 (193)
Q Consensus 182 ~g~~~l~s~~~ 192 (193)
+++.+++++.+
T Consensus 82 ~~~~~l~s~~~ 92 (191)
T 3v64_A 82 SQPVVLRSTVK 92 (191)
T ss_dssp SCCEEEEEEEE
T ss_pred CccEEEecCcc
Confidence 99888887543
No 12
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.23 E-value=3.9e-12 Score=94.88 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=65.5
Q ss_pred Ccee-cCCCCccCCCCcceeecCC----ccCCCCceeeCCCCCCCCcccccCCCCCCC--CCCCCCcEEeeC-CCCceec
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFVDGG----HRTLDLLHDMGARYHWGDTCETDITKSDCK--GVCSPGATCSLN-PSGGYIC 95 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~~gg----~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~--~pC~~gg~C~~~-~~~~~~C 95 (193)
+|.| |++||+|.. |+.+.... ..-.+.|.|.|++||+|..|+.+++ +|. .||.++|+|++. . ++|+|
T Consensus 82 ~~~C~C~~G~~G~~--C~~C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~~~~--~C~~~~~C~~~g~C~~~~~-~~~~C 156 (169)
T 2vj2_A 82 PGDCRCQYGWQGLY--CDKCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLN--YCGTHQPCLNGGTCSNTGP-DKYQC 156 (169)
T ss_dssp TTCCEECTTEESSS--SCEECCCTTCSSEECSSTTCCEECTTEETTTTCEESC--HHHHTCCCCTTCEEEECST-TCEEE
T ss_pred CCeeECCCCCCCCC--cccCCCCCCCCCCCcCCCCEEeCCCCCCCCcccCCCC--CCCCCCCCCCCCEEcCCCC-CCcEe
Confidence 5778 999999987 88754311 0112579999999999999997765 897 899999999986 5 89999
Q ss_pred ccCCCCCCccccccccce
Q psy2060 96 DDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 96 ~~C~~g~~~~~~g~~C~~ 113 (193)
. |++||. |..|++
T Consensus 157 ~-C~~G~~----G~~Ce~ 169 (169)
T 2vj2_A 157 S-CPEGYS----GPNCEI 169 (169)
T ss_dssp E-CCTTCC----STTSCC
T ss_pred E-CCCCCc----CcCcCC
Confidence 9 999999 888863
No 13
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.23 E-value=3e-11 Score=90.99 Aligned_cols=77 Identities=18% Similarity=0.314 Sum_probs=63.6
Q ss_pred ecccCCCcceEEecC--CCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcCC
Q psy2060 114 RARSFPKNSFLTFPA--LKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRAD 191 (193)
Q Consensus 114 ~~~sF~g~syl~~~~--~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~~ 191 (193)
...+|.|.+|+.+.. ........|+|+|||..++|+|||.+. ....||++|+|.+|+ |+++|++|++..+++++.
T Consensus 6 ~~~~F~G~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~-~~~~d~l~L~L~~G~--l~~~~~~G~~~~~~~~~~ 82 (182)
T 2r16_A 6 TVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTS-RDSADTLRLELDAGR--VKLTVNLGKGPETLFAGY 82 (182)
T ss_dssp CEEEEESSCCEEEEEEEEEEESEEEEEEEEECSCSSEEEEEEEC-SSSCCEEEEEEETTE--EEEEEESSSCCEEEEECS
T ss_pred ccEEECCCceEEEECCCcCCccceEEEEEEEECCCCEEEEEeCC-CCCCCEEEEEEECCE--EEEEEECCCCceEEEcCc
Confidence 357899999988642 233456789999999999999999874 356799999999999 999999999988888766
Q ss_pred CC
Q psy2060 192 SI 193 (193)
Q Consensus 192 ~i 193 (193)
.|
T Consensus 83 ~l 84 (182)
T 2r16_A 83 NL 84 (182)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 14
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.23 E-value=3.6e-12 Score=92.38 Aligned_cols=82 Identities=16% Similarity=0.206 Sum_probs=63.2
Q ss_pred cee-cCCCCccCC-------CCcceeec------------CC--ccCCCCceeeCCCCCCCC------------cccccC
Q psy2060 25 YLS-GLPDNEGLE-------KRVQTFVD------------GG--HRTLDLLHDMGARYHWGD------------TCETDI 70 (193)
Q Consensus 25 ~~c-C~~g~~g~~-------~~c~~~~~------------gg--~~~~~~~~C~C~~g~~G~------------~C~~~~ 70 (193)
|.| |++||+|.. +.|+ ++| ++ .++.++|.|.|++||+|. .|+ ++
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~-di 96 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ-DV 96 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE-EC
T ss_pred CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcC-Cc
Confidence 789 999999841 2363 333 23 678899999999999987 554 44
Q ss_pred CCCCCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 71 TKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 71 ~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
+ +|. ++|.++++|++.. ++|+|. |++||.+...+..|+
T Consensus 97 d--eC~~~~~~C~~~~~C~n~~-g~y~C~-C~~Gy~g~~~~~~C~ 137 (143)
T 2bou_A 97 D--ECSSGQHQCDSSTVCFNTV-GSYSCR-CRPGWKPRHGIPNNQ 137 (143)
T ss_dssp C--HHHHTCCCCCTTSEEEECS-SCEEEE-CCSSSCBCTTCCSSB
T ss_pred c--CccCcCCCCCCCCEEECCC-CCEEee-CCCCcccCCCCccCc
Confidence 4 887 7999999999998 999999 999999544444443
No 15
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.19 E-value=3.8e-12 Score=96.23 Aligned_cols=84 Identities=15% Similarity=0.117 Sum_probs=67.0
Q ss_pred CCcee-cCCCCccCCCCccee-------ecCC--c----cCCCCceeeCCCCCCC-----Cccccc-CCCCCCCCCC-CC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTF-------VDGG--H----RTLDLLHDMGARYHWG-----DTCETD-ITKSDCKGVC-SP 81 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~-------~~gg--~----~~~~~~~C~C~~g~~G-----~~C~~~-~~~~~C~~pC-~~ 81 (193)
+.|.| |++||+|....|+++ .++| . ++.++|+|.|++||+| ..|+.. ++ +|..+| .+
T Consensus 72 g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~--~C~~~C~~~ 149 (186)
T 1z1y_A 72 NMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGET--ACQLXCNTD 149 (186)
T ss_dssp CSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECC--CCCCCCCTT
T ss_pred CCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCC--ccccccccc
Confidence 68999 999999986224311 1134 4 7778999999999998 889864 34 888899 99
Q ss_pred CcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 82 GATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 82 gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+++|++.. ++|+|. |++||. |..|+..
T Consensus 150 ~~~C~n~~-g~y~C~-C~~G~~----g~~~~~~ 176 (186)
T 1z1y_A 150 NEVCXNVE-GVYXCQ-CMEGFT----FDXEXNV 176 (186)
T ss_dssp TEEEEEET-TEEEEE-ECTTCE----EETTTTE
T ss_pred CcceecCC-CCeeeE-CCCCCc----cCccccc
Confidence 99999988 999999 999998 7777654
No 16
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.17 E-value=1.8e-10 Score=85.78 Aligned_cols=74 Identities=15% Similarity=0.249 Sum_probs=59.3
Q ss_pred ccCCCcc--eEEecCCCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcCCCC
Q psy2060 116 RSFPKNS--FLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193 (193)
Q Consensus 116 ~sF~g~s--yl~~~~~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~~~i 193 (193)
..|.+.+ |+.|+..+. ...+|+|+|||..++|+|||.+. ....||++|+|.+|+ |+++|+.|++.+++.+...|
T Consensus 8 ~~F~g~s~~~l~f~~~~~-~~~~is~~FrT~~~~GlLly~~~-~~~~df~~l~L~~G~--l~~~~~~g~~~~~~~s~~~v 83 (170)
T 1d2s_A 8 NGPGQEPIAVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDT-NPKDDWFMLGLRDGR--PEIQLHNHWAQLTVGAGPRL 83 (170)
T ss_dssp CTTCCSCSEEEEEEGGGC-CCCEEEEEEEESCSSEEEEEEEE-ETTTEEEEEEEETTE--EEEEEESSSCEEEEECSCCC
T ss_pred cCCCCCceEEEEecCCCC-CceEEEEEEEeCCCCEEEEEecC-CCCCCEEEEEEeCCE--EEEEEECCCceEEEeCCCcc
Confidence 3566655 577765544 44689999999999999999974 335799999999999 99999999998888766543
No 17
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.16 E-value=1.3e-10 Score=88.38 Aligned_cols=75 Identities=37% Similarity=0.554 Sum_probs=62.1
Q ss_pred ccCCCcceEEecCCCC-----CceeEEEEEEEeCCCCeEEEEeec----CCCCCceEEEEecCCeeEEEEEEeCCCceEE
Q psy2060 116 RSFPKNSFLTFPALKQ-----RNRLHIKLQFSTLHDSGLLLYNGR----YNERHDFIALELTDSGRSVQFSWSLGSEVAR 186 (193)
Q Consensus 116 ~sF~g~syl~~~~~~~-----~~~~~i~~~f~T~~~~glLl~~g~----~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~ 186 (193)
..|.+++|+.++.... .....|+|+|||..++|+|||.+. .....||++|+|.+|+ |+++|++|++..+
T Consensus 8 ~~F~G~syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~--l~~~~~~G~g~~~ 85 (195)
T 3sh4_A 8 AYFHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGH--LVFRYQLGSGEAR 85 (195)
T ss_dssp EEEEEEEEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEETTE--EEEEEECSSCEEE
T ss_pred CEECCCEEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeCCE--EEEEEECCCCcEE
Confidence 5788999999986521 234789999999999999999863 1245799999999999 9999999999888
Q ss_pred EEcCCC
Q psy2060 187 LNRADS 192 (193)
Q Consensus 187 l~s~~~ 192 (193)
++++.+
T Consensus 86 ~~s~~~ 91 (195)
T 3sh4_A 86 LVSEDP 91 (195)
T ss_dssp EEEEEE
T ss_pred EEcCce
Confidence 887644
No 18
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.14 E-value=2.9e-10 Score=95.70 Aligned_cols=70 Identities=29% Similarity=0.582 Sum_probs=62.3
Q ss_pred cccCC-CcceEEecCCCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEE
Q psy2060 115 ARSFP-KNSFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLN 188 (193)
Q Consensus 115 ~~sF~-g~syl~~~~~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~ 188 (193)
..+|. +.||++++.++.....+|+|+|||..++|+|||++ ....||++|+|.+|+ |+++|++|+++.+++
T Consensus 7 ~v~F~~~~Syl~~p~~~~~~~~~is~~frT~~~~GlLly~~--~~~~dfi~l~L~~G~--l~~~~~~G~g~~~~~ 77 (410)
T 3asi_A 7 PVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS--GDGNDFIVVELVKGY--LHYVFDLGNGANLIK 77 (410)
T ss_dssp CEEECSTTCEEEESCCCCSSCEEEEEEEECSCSCEEEEEEE--BSTTCEEEEEEETTE--EEEEEESSSCEEEEE
T ss_pred ccEeCCCCeeEEeCCCCCCceEEEEEEEEeCCCCeEEEEeC--CCCCCEEEEEEECCE--EEEEEECCCCcEEEE
Confidence 35785 68999999888777889999999999999999986 346799999999999 999999999998886
No 19
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.13 E-value=2e-11 Score=85.80 Aligned_cols=81 Identities=20% Similarity=0.311 Sum_probs=60.9
Q ss_pred ccCCCCCCcee-cCCCCccCCC---Ccce-eecC---C--ccCCCCceeeCCCCCC---CCcccccCCCCCCC--CCCCC
Q psy2060 17 LTNGPFQPYLS-GLPDNEGLEK---RVQT-FVDG---G--HRTLDLLHDMGARYHW---GDTCETDITKSDCK--GVCSP 81 (193)
Q Consensus 17 ~~~~~~~~~~c-C~~g~~g~~~---~c~~-~~~g---g--~~~~~~~~C~C~~g~~---G~~C~~~~~~~~C~--~pC~~ 81 (193)
..|...+.|.| |++||+|... .|.. +.++ + .+ .++|.|.|++||+ |..|+ +++ +|. +||
T Consensus 16 C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~g~~C~-did--eC~~~~~C-- 89 (118)
T 1dx5_I 16 CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDDGFICT-DID--ECENGGFC-- 89 (118)
T ss_dssp EEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEETTTEEE-ECC--HHHHCSSC--
T ss_pred CCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccC-CCCeEeECCCCccCCCCCccc-ccc--ccCCCCCC--
Confidence 44553467999 9999999841 1221 0122 2 44 4789999999999 89995 555 998 899
Q ss_pred CcEEeeCCCCceecccCCCCCCcc
Q psy2060 82 GATCSLNPSGGYICDDCSLAGSYE 105 (193)
Q Consensus 82 gg~C~~~~~~~~~C~~C~~g~~~~ 105 (193)
+++|++.. ++|+|. |++||.+.
T Consensus 90 ~~~C~n~~-g~y~C~-C~~G~~g~ 111 (118)
T 1dx5_I 90 SGVCHNLP-GTFECI-CGPDSALA 111 (118)
T ss_dssp SSEEEECS-SSEEEE-ECSSSSCE
T ss_pred cCeEEeCC-CCEEEE-CCCCCccC
Confidence 68999998 999999 99999843
No 20
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.12 E-value=4.6e-11 Score=85.76 Aligned_cols=60 Identities=25% Similarity=0.444 Sum_probs=54.8
Q ss_pred ccCCCCceeeCCCCCCCCcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.+..++|+|.|++||+|..|+.+++ +|. .||.++++|++.. ++|+|. |++||. |..|+..
T Consensus 22 ~~~~g~~~C~C~~Gy~G~~C~~~~~--~C~~~~C~~~~~C~~~~-g~~~C~-C~~G~~----G~~C~~~ 82 (135)
T 2vj3_A 22 INTLGSFECQCLQGYTGPRCEIDVN--ECVSNPCQNDATCLDQI-GEFQCI-CMPGYE----GVHCEVN 82 (135)
T ss_dssp EECSSSEEEECCTTEESTTSCEECC--TTTTCCCCSSCEEEECS-SCEEEE-CCTTEE----SSSSCEE
T ss_pred ECCCCCEEEECCCCCcCCcccccCc--cCCCCCCCCCCEEeCCC-CCceee-CCCCCc----CCcceec
Confidence 6778899999999999999998876 999 9999999999987 999999 999998 8899753
No 21
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.11 E-value=6.5e-12 Score=94.92 Aligned_cols=88 Identities=9% Similarity=0.092 Sum_probs=65.1
Q ss_pred CCcee-cCCCCccCC-CCcce------------eecCC--ccCC-----CCceeeCCCCCCCCcccccCCCCCCC-CCCC
Q psy2060 23 QPYLS-GLPDNEGLE-KRVQT------------FVDGG--HRTL-----DLLHDMGARYHWGDTCETDITKSDCK-GVCS 80 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~-~~c~~------------~~~gg--~~~~-----~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~ 80 (193)
+.|.| |++||+|.. +.|+. +.++| .++. ++|+|.|++||+|..|+-.++ +|. .||.
T Consensus 23 g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d--~C~~~~C~ 100 (186)
T 1z1y_A 23 NHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLD--VCQYXNCG 100 (186)
T ss_dssp SCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEG--GGTTCCCC
T ss_pred CCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCC--cCcCCCCC
Confidence 46899 999999871 12641 12234 5666 899999999999986544444 999 9999
Q ss_pred CCcEEe----eCCCCceecccCCCCCCccc-ccccccee
Q psy2060 81 PGATCS----LNPSGGYICDDCSLAGSYEH-YDRLCRLR 114 (193)
Q Consensus 81 ~gg~C~----~~~~~~~~C~~C~~g~~~~~-~g~~C~~~ 114 (193)
++++|+ +.. ++|+|. |++||.+.. .+..|+..
T Consensus 101 ~~g~C~~~~~~~~-g~~~C~-C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 101 ESGECIVEYLSEI-QSAGCS-CAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp TTEEEEEEEETTE-EEEEEE-ECTEEEEETTTTTEEEEE
T ss_pred CCCEEeeCCcCCC-CCceEE-CCCCCcccCCCCCcceEc
Confidence 999999 555 899999 999998311 13788754
No 22
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.10 E-value=1.9e-11 Score=88.96 Aligned_cols=53 Identities=26% Similarity=0.676 Sum_probs=44.1
Q ss_pred ceeeCCCCCC---CCcccccCCCCCCC-CC--CCCCcEEeeCCCCceecccCCCCCCcccccccc
Q psy2060 53 LHDMGARYHW---GDTCETDITKSDCK-GV--CSPGATCSLNPSGGYICDDCSLAGSYEHYDRLC 111 (193)
Q Consensus 53 ~~C~C~~g~~---G~~C~~~~~~~~C~-~p--C~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C 111 (193)
|.|.|++||+ |..|+ +++ +|. .| |.++ +|++.. ++|+|. |++||.+...++.|
T Consensus 88 ~~C~C~~Gy~~~~g~~C~-did--eC~~~~~~C~~g-~C~n~~-g~y~C~-C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCE-DID--ECEVFPGVCKNG-LCVNTR-GSFKCQ-CPSGMTLDATGRIC 146 (147)
T ss_dssp CCTTTCTTEEEEETTEEE-ECC--HHHHSTTCSSSS-EEEEET-TEEEEE-CCTTCCBCTTSSCB
T ss_pred CcccCCCccccCCCCccC-ccc--cccCCCCCCCCC-EEECCC-CCEEee-CCCCCccCCCCCee
Confidence 7889999995 99998 665 998 55 9975 999998 999999 99999865555555
No 23
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.08 E-value=9.1e-11 Score=103.26 Aligned_cols=92 Identities=16% Similarity=0.174 Sum_probs=70.1
Q ss_pred eccCCCCCCcee--cCCCCccCCCCcceeec-----------CC-----ccCCCCceee-CCCCCCCCccc---------
Q psy2060 16 DLTNGPFQPYLS--GLPDNEGLEKRVQTFVD-----------GG-----HRTLDLLHDM-GARYHWGDTCE--------- 67 (193)
Q Consensus 16 ~~~~~~~~~~~c--C~~g~~g~~~~c~~~~~-----------gg-----~~~~~~~~C~-C~~g~~G~~C~--------- 67 (193)
.+.|.+.+.|.| |++||+|..+.|+ ++| ++ .++.++|+|. |++||+|..|+
T Consensus 16 ~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~ 94 (634)
T 1yo8_A 16 QCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKT 94 (634)
T ss_dssp CEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHS
T ss_pred EEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccccccccc
Confidence 345665566888 9999999554586 333 21 4677899998 99999998865
Q ss_pred -----ccCCCCCCC---CCCCCCcEEeeCC---CCceecccCCCCCCccccccccce
Q psy2060 68 -----TDITKSDCK---GVCSPGATCSLNP---SGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 68 -----~~~~~~~C~---~pC~~gg~C~~~~---~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
..++ +|. ++|.++++|++.. .++|+|. |++||.+. |..|+.
T Consensus 95 dg~~C~did--eC~~~~~pC~~~~~Cvnt~~~~~GsY~C~-C~~Gy~Gd--G~~Ce~ 146 (634)
T 1yo8_A 95 EKQVCEPEN--PCKDKTHNCHKHAECIYLGHFSDPMYKCE-CQTGYAGD--GLICGE 146 (634)
T ss_dssp CCCCEEECC--TTTTTCCCCCTTEEEEECCTTCSSSEEEE-ECTTEEES--SSSEEE
T ss_pred CCCcccccc--cccCCCcccccCccccccccccccceeee-ccCCcccc--Cccccc
Confidence 3444 998 5999999999874 2799999 99999843 478874
No 24
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=99.06 E-value=6.7e-11 Score=71.55 Aligned_cols=45 Identities=22% Similarity=0.533 Sum_probs=37.3
Q ss_pred CCcccccCCCCCCC-CCCCCCcEEe-----eCCCCceecccCCCCCCccccccccceec
Q psy2060 63 GDTCETDITKSDCK-GVCSPGATCS-----LNPSGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 63 G~~C~~~~~~~~C~-~pC~~gg~C~-----~~~~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
|..|++.++ +|. +||+|||+|. +.. ++|+|. ||++|. |.+||..+
T Consensus 1 G~~c~~~~~--eC~s~pC~NgGtC~~~~~~d~~-~~y~C~-C~~g~~----G~~CE~~v 51 (55)
T 3u7u_G 1 GTSHLVKCA--EKEKTFCVNGGECFMVKDLSNP-SRYLCK-CPNEFT----GDRCQNYV 51 (55)
T ss_dssp --CCEEECC--STTTTTSCTTCEEEEECCC--C-CCEEEE-ECTTEE----STTSCEEC
T ss_pred CCCCcccCC--CCcCCCCCCCCCcCCCCccCCC-CCEeEe-CCCCCc----CCCcCccC
Confidence 678999987 999 9999999995 444 899999 999999 99999864
No 25
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.05 E-value=1.1e-09 Score=83.79 Aligned_cols=68 Identities=16% Similarity=0.285 Sum_probs=56.1
Q ss_pred ceEEecCCCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcCCCC
Q psy2060 122 SFLTFPALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193 (193)
Q Consensus 122 syl~~~~~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~~~i 193 (193)
+|+.++.... ...+|+|+|||..++|+|||++. ....||++|+|.+|+ |+++|++|++.+++.+...|
T Consensus 28 ~y~~~~~~~~-~~~~is~~frT~~~~GlLly~~~-~~~~d~~~l~L~~G~--l~~~~~~g~~~~~~~s~~~v 95 (205)
T 1f5f_A 28 AVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDT-NPKDDWFMLGLRDGR--PEIQLHNHWAQLTVGAGPRL 95 (205)
T ss_dssp EEEEEEGGGC-CCCEEEEEEEESCSSEEEEEEEE-ETTTEEEEEEEETTE--EEEEEESSSCEEEEECSCCC
T ss_pred EEEEECCCCC-CceEEEEEEEeCCCCEEEEEeCC-CCCCCEEEEEEECCE--EEEEEECCCceEEEecCCcc
Confidence 7788775443 33689999999999999999974 334699999999999 99999999998888766543
No 26
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.04 E-value=1.9e-09 Score=89.80 Aligned_cols=76 Identities=28% Similarity=0.568 Sum_probs=62.7
Q ss_pred cccCC--CcceEEecCCC--CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcC
Q psy2060 115 ARSFP--KNSFLTFPALK--QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRA 190 (193)
Q Consensus 115 ~~sF~--g~syl~~~~~~--~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~ 190 (193)
...|. +.||+.++... ......|+|.|||..++|+|||.+. ....||++|+|.+|+ |+++|++|++..+|+++
T Consensus 21 a~~Fg~~~~S~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~-~~~~d~~~l~L~~G~--l~~~~~~g~~~~~~~~~ 97 (383)
T 2jd4_A 21 AHQFGLSQNSHLVLPLQQSDVRKRLQVQLSIRTFASSGLIYYVAH-QNQMDYATLQLQEGR--LHFMFDLGKGRTKVSHP 97 (383)
T ss_dssp CEECCSSTTCEEEEECCSCCCSSEEEEEEEEEECCSCEEEEEEEC-TTSSSEEEEEEETTE--EEEEEECSSCEEEEECC
T ss_pred ccccCCCCCeeEEEeCCchhcccceEEEEEEEcCCCCeEEEEeCC-CCCCcEEEEEEECCE--EEEEEECCCCeEEEeCc
Confidence 34555 48999997533 3556899999999999999999974 345799999999999 99999999999999887
Q ss_pred CCC
Q psy2060 191 DSI 193 (193)
Q Consensus 191 ~~i 193 (193)
..|
T Consensus 98 ~~~ 100 (383)
T 2jd4_A 98 ALL 100 (383)
T ss_dssp CCC
T ss_pred cee
Confidence 653
No 27
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.02 E-value=1.6e-09 Score=83.94 Aligned_cols=74 Identities=12% Similarity=0.267 Sum_probs=58.5
Q ss_pred cccCC-CcceEEecCCC---C-CceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEc
Q psy2060 115 ARSFP-KNSFLTFPALK---Q-RNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNR 189 (193)
Q Consensus 115 ~~sF~-g~syl~~~~~~---~-~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s 189 (193)
+.+|. +.+|+.|...+ . .....|+|.|+|..++|+|||++......||++|+|.+|+ |+++|++|++...+++
T Consensus 12 ~~~F~~g~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~dfi~LeL~~G~--l~~~~~~G~~~~~~~~ 89 (220)
T 2r1b_A 12 TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGK--IGVKFNVGTDDIAIEE 89 (220)
T ss_dssp EEEEEEEEEEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEESTTCCCEEEEEEETTE--EEEEEESSSSCEEEEC
T ss_pred eEEECCCCeEEEEECCCCCcccccCcEEEEEEEeCCCCEEEEEecCCCCCCCeEEEEEECCE--EEEEEECCCCceEEEe
Confidence 35675 56888775332 1 2234799999999999999997542346899999999999 9999999999888887
Q ss_pred C
Q psy2060 190 A 190 (193)
Q Consensus 190 ~ 190 (193)
.
T Consensus 90 ~ 90 (220)
T 2r1b_A 90 S 90 (220)
T ss_dssp T
T ss_pred C
Confidence 5
No 28
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.01 E-value=1.4e-09 Score=81.69 Aligned_cols=67 Identities=25% Similarity=0.484 Sum_probs=57.2
Q ss_pred cccCCCcceEEecCCCC---CceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEE
Q psy2060 115 ARSFPKNSFLTFPALKQ---RNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVAR 186 (193)
Q Consensus 115 ~~sF~g~syl~~~~~~~---~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~ 186 (193)
...|.|.+|+.|+.... .....|+|+|||..++|+|||.+ +..||++|+|.+|+ |+++|++|++..+
T Consensus 7 ~~~F~G~sy~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~g---~~~d~l~l~L~~G~--l~~~~~~G~g~~~ 76 (184)
T 2h0b_A 7 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTG---KSADYVNLALKNGA--VSLVINLGSGAFE 76 (184)
T ss_dssp EEEEESSEEEEEECSSSCEEESEEEEEEEEEESCSCEEEEEEC---CTTEEEEEEEETTE--EEEEEEESSCEEE
T ss_pred eeEECCceEEEEccccCccccCccEEEEEEEeCCCCEEEEEeC---CCCCEEEEEEECCE--EEEEEECCCCeEE
Confidence 46799999999976542 24578999999999999999985 36799999999999 9999999998754
No 29
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.00 E-value=2.7e-09 Score=79.91 Aligned_cols=73 Identities=12% Similarity=0.267 Sum_probs=57.8
Q ss_pred cccCC-CcceEEecCCC----CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEc
Q psy2060 115 ARSFP-KNSFLTFPALK----QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNR 189 (193)
Q Consensus 115 ~~sF~-g~syl~~~~~~----~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s 189 (193)
+.+|. +.+|+.|...+ ......|+|.|||..++|+|||.+......||++|+|.+|+ |+++|++|++...+..
T Consensus 6 ~~~F~~~~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~l~L~~G~--l~~~~~~G~~~~~~~~ 83 (178)
T 3bod_A 6 TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGK--IGVKFNVGTDDIAIEE 83 (178)
T ss_dssp EEEEEEEEEEEEEECCTTSCCCBSEEEEEEEEECCCSSEEEEEEEESSSSCCEEEEEEETTE--EEEEEESSSCCEEEEC
T ss_pred EEEECCCCcEEEEECCCcCCCCccccEEEEEEEECCCCEEEEEEcCCCCCCCEEEEEEECCE--EEEEEECCCCceEEec
Confidence 35675 46888875433 13346899999999999999997432457899999999999 9999999999888773
No 30
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=98.99 E-value=2.8e-09 Score=82.90 Aligned_cols=73 Identities=12% Similarity=0.220 Sum_probs=58.6
Q ss_pred cccCCCcceEEecCCC----CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcC
Q psy2060 115 ARSFPKNSFLTFPALK----QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRA 190 (193)
Q Consensus 115 ~~sF~g~syl~~~~~~----~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~ 190 (193)
..+|.+ +|+.|...+ ......|+|.|+|..++|+|||.+......||++|+|.+|+ |+++|++|++...+++.
T Consensus 42 ~f~~~g-s~i~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~L~L~~G~--l~~~~~~G~~~~~~~~~ 118 (226)
T 2r1d_A 42 IFSKGG-GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGK--IGVKFNVGTDDIAIEES 118 (226)
T ss_dssp EEEEEE-EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEECTTCCCEEEEEEETTE--EEEEEESSSCEEEEECC
T ss_pred EEecCC-cEEEEECCccccccccccEEEEEEEeCCCCEEEEEecCCCCCCCEEEEEEECCE--EEEEEECCCCcEEEEeC
Confidence 356677 888875433 12335899999999999999997532346899999999999 99999999999888864
No 31
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.97 E-value=2.3e-12 Score=101.97 Aligned_cols=84 Identities=12% Similarity=0.024 Sum_probs=66.3
Q ss_pred CCcee-cCCCCccCCCCcceeec--------------------------------------CC--ccCCCCceeeCCCCC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTFVD--------------------------------------GG--HRTLDLLHDMGARYH 61 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~~~--------------------------------------gg--~~~~~~~~C~C~~g~ 61 (193)
..|.| |++||+|.. |+++++ || .+...+|+|.||+||
T Consensus 51 ~~y~C~Cp~Gf~G~~--Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf 128 (267)
T 4fbr_A 51 MTYNGEGPIGFRGTL--SSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGF 128 (267)
T ss_dssp EEETTSCCEEEEEEE--CSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEE
T ss_pred CCeEEeCCCCccccc--ccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCc
Confidence 56888 999999997 876554 33 455578999999999
Q ss_pred CCCcccccCCC---------------------CC------CC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 62 WGDTCETDITK---------------------SD------CK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 62 ~G~~C~~~~~~---------------------~~------C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+|.+|+..++. .. |. .||.++|+|++.. ++|+|. ||++|+ |.+|+.
T Consensus 129 ~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~-~~y~C~-Cp~Gf~----G~~c~~ 202 (267)
T 4fbr_A 129 KSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGT-MTYNGE-GPIGFR----GTLTSP 202 (267)
T ss_dssp EEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEE-EEETTS-CCEEEE----EEEEET
T ss_pred cccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCC-CCeEEe-CCCCcc----cccccc
Confidence 99999876540 01 12 5788888998887 999999 999998 889987
Q ss_pred e
Q psy2060 114 R 114 (193)
Q Consensus 114 ~ 114 (193)
.
T Consensus 203 ~ 203 (267)
T 4fbr_A 203 D 203 (267)
T ss_dssp T
T ss_pred c
Confidence 4
No 32
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=98.95 E-value=6.1e-09 Score=87.12 Aligned_cols=72 Identities=33% Similarity=0.469 Sum_probs=59.5
Q ss_pred CCcceEEecC--CCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcCCCC
Q psy2060 119 PKNSFLTFPA--LKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRADSI 193 (193)
Q Consensus 119 ~g~syl~~~~--~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~~~i 193 (193)
...+|+.++. .......+|+|+|||..++|+|||.+. ....||++|+|.+|+ |+++|++|++..+++++..|
T Consensus 41 ~~~s~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~-~~~~dfi~l~L~~G~--l~~~~~~g~g~~~~~~~~~~ 114 (394)
T 1dyk_A 41 SRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMAR-INHADFATVQLRNGF--PYFSYDLGSGDTSTMIPTKI 114 (394)
T ss_dssp STTCEEEEECCGGGGSSEEEEEEEEEECCSCEEEEEEEC-TTSSSEEEEEEETTE--EEEEEESSSCEEEEECCSCC
T ss_pred CCCcEEEEEcCccccccceEEEEEEEeCCCCeEEEEcCC-CCCCceEEEEEECCE--EEEEEECCCCceEEEccccc
Confidence 3478877753 233567899999999999999999974 346799999999999 99999999999999887653
No 33
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.93 E-value=2.3e-10 Score=78.91 Aligned_cols=75 Identities=24% Similarity=0.339 Sum_probs=27.2
Q ss_pred cCCCCccCCCCcceee--c--CC-----ccCCCCceeeCCCCCCC---CcccccCCCCCCC--CCCCCCcEEeeCCCCce
Q psy2060 28 GLPDNEGLEKRVQTFV--D--GG-----HRTLDLLHDMGARYHWG---DTCETDITKSDCK--GVCSPGATCSLNPSGGY 93 (193)
Q Consensus 28 C~~g~~g~~~~c~~~~--~--gg-----~~~~~~~~C~C~~g~~G---~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~ 93 (193)
...+|+|.. |+++. + ++ .++.++|.|.|++||+| ..|+ +++ +|. .+|. ++|++.. ++|
T Consensus 18 ~~~~~~~~~--Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-did--eC~~~~~C~--~~C~n~~-gsy 89 (107)
T 2w2n_E 18 TENLYFQGA--MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DID--ECQDPDTCS--QLCVNLE-GGY 89 (107)
T ss_dssp --CCCCSCC--BSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C--------------------------
T ss_pred cCCCcCCCC--CcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-ccc--ccCCCCCcC--CeeecCC-CCE
Confidence 456777776 74321 1 22 67788999999999998 8898 665 997 8996 6999998 999
Q ss_pred ecccCCCCCCcccccccc
Q psy2060 94 ICDDCSLAGSYEHYDRLC 111 (193)
Q Consensus 94 ~C~~C~~g~~~~~~g~~C 111 (193)
+|. |++||.+...+..|
T Consensus 90 ~C~-C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 90 KCQ-CEEGFQLDPHTKAC 106 (107)
T ss_dssp ------------------
T ss_pred EEE-CCCCceECCCCCcc
Confidence 999 99999854444444
No 34
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.90 E-value=8.7e-10 Score=72.32 Aligned_cols=52 Identities=23% Similarity=0.377 Sum_probs=45.7
Q ss_pred ccCCCCceeeCCCCCC--CCcccccCCCCCCC--CCCCCCcEEeeCCCCceecccCCCCCCc
Q psy2060 47 HRTLDLLHDMGARYHW--GDTCETDITKSDCK--GVCSPGATCSLNPSGGYICDDCSLAGSY 104 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~--G~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~ 104 (193)
.++.++|+|.|++||+ |..|+ +++ +|. +||.+ ++|++.. ++|+|. |++||.+
T Consensus 20 ~n~~g~y~C~C~~Gy~~~g~~C~-did--eC~~~~~C~~-~~C~n~~-g~y~C~-C~~G~~g 75 (82)
T 1emn_A 20 INTDGSYRCECPFGYILAGNECV-DTD--ECSVGNPCGN-GTCKNVI-GGFECT-CEEGFEP 75 (82)
T ss_dssp CCCSSCCCEECCTTEEEETTEEE-ECC--GGGTCCTTSS-SCEEECS-SSEEEC-CSSSSCC
T ss_pred EecCCCEEEECCCCeECCCCccC-Ccc--cccCCCCCCC-CEeECCC-CCEEeE-CCCCeEe
Confidence 5788999999999997 99995 555 997 89987 5999998 999999 9999984
No 35
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.89 E-value=4.3e-10 Score=74.46 Aligned_cols=59 Identities=22% Similarity=0.430 Sum_probs=48.0
Q ss_pred ccCCCCceeeCCCCCC-----CCcccccCCCCCCC-CC--CCCCcEEeeCCCCceecccCCCCCCcccccccc
Q psy2060 47 HRTLDLLHDMGARYHW-----GDTCETDITKSDCK-GV--CSPGATCSLNPSGGYICDDCSLAGSYEHYDRLC 111 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~-----G~~C~~~~~~~~C~-~p--C~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C 111 (193)
.++.++|+|.|++||+ |..|+ +++ +|. .| |. +++|++.. ++|+|. |++||.+...+..|
T Consensus 19 ~n~~g~y~C~C~~Gy~~~~~~g~~C~-did--eC~~~~~~C~-~~~C~n~~-g~y~C~-C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 19 VNTPGDFECKCDEGYESGFMMMKNCM-DID--ECQRDPLLCR-GGVCHNTE-GSYRCE-CPPGHQLSPNISAC 85 (86)
T ss_dssp EEETTEEEECCCSSEEECTTTSSSEE-ECC--HHHHCSSTTT-TSEEEEET-TEEEEE-SCTTSCCCSSSCCC
T ss_pred ECCCCCEEeeCCCCcCccCCCCCccC-Ccc--cccCCCCcCC-CCEeEcCC-CCEEEE-CcCCcccCCCCCcc
Confidence 5778899999999998 78897 555 998 66 65 58999998 999999 99999854444444
No 36
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.88 E-value=1.2e-09 Score=78.70 Aligned_cols=58 Identities=19% Similarity=0.414 Sum_probs=47.8
Q ss_pred CCceeeCCCCCCCCcccccC----------CCCCCC-CCCCCCcEEe-------eCCCCceecccCCCCCCccccccccc
Q psy2060 51 DLLHDMGARYHWGDTCETDI----------TKSDCK-GVCSPGATCS-------LNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 51 ~~~~C~C~~g~~G~~C~~~~----------~~~~C~-~pC~~gg~C~-------~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
++|+|.|++||+|..|+... +.++|. +||.++++|+ +.. ++|+|. |++||. |..|+
T Consensus 21 g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~-~~~~C~-C~~G~~----G~~C~ 94 (143)
T 4d90_A 21 GSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTF-IGYVCK-CPRGFN----GIHCQ 94 (143)
T ss_dssp -CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEE-CCEEEE-CCTTEE----STTSC
T ss_pred CCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCC-CCeEeE-CcCCCc----CCCcc
Confidence 68999999999999998621 124899 9999999999 444 799999 999998 89997
Q ss_pred ee
Q psy2060 113 LR 114 (193)
Q Consensus 113 ~~ 114 (193)
..
T Consensus 95 ~~ 96 (143)
T 4d90_A 95 HN 96 (143)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 37
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=98.87 E-value=1.3e-08 Score=89.69 Aligned_cols=73 Identities=27% Similarity=0.420 Sum_probs=58.4
Q ss_pred cccCCCcceEEecCC-CCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEEcC
Q psy2060 115 ARSFPKNSFLTFPAL-KQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLNRA 190 (193)
Q Consensus 115 ~~sF~g~syl~~~~~-~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~s~ 190 (193)
..+|.|.+|+.|++. .......|+|+|+|..++|+|||.+. ....||++|+|.+|+ |+++|++|++..+|+++
T Consensus 12 ~~~F~g~~~~~y~p~~~~~~~~~isl~FrT~~~~glLly~~~-~~~~dfl~l~L~~G~--l~~~~~~G~g~~~l~~~ 85 (608)
T 2wjs_A 12 SVSSGGDCVRTYRPEIKKGSYNNIVVHVKTAVADNLLFYLGS-AKFIDFLAIEMRKGK--VSFLWDVGSGVGRVEYP 85 (608)
T ss_dssp BCC----CEEEECCCCSCTTEEEEEEEEEESCSCEEEEEEEC-SSCSCEEEEEEETTE--EEEEEESSSCEEEEECC
T ss_pred EEEcCCCeEEEecCCCCCcccceEEEEEecCCCceEEEEeCC-CCCCcEEEEEEECCE--EEEEEECCCCceEEeeC
Confidence 467899999999752 22445789999999999999999975 346899999999999 99999999999999864
No 38
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.86 E-value=5.7e-10 Score=80.74 Aligned_cols=67 Identities=25% Similarity=0.304 Sum_probs=53.9
Q ss_pred cCC--ccCCCCceeeCCCCCCCCcccccCCCCCCC-CCCCCCc---EEeeCCCC-ceecccCCCCCCcccccccccee
Q psy2060 44 DGG--HRTLDLLHDMGARYHWGDTCETDITKSDCK-GVCSPGA---TCSLNPSG-GYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 44 ~gg--~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg---~C~~~~~~-~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++| .+..++|+|.|++||+|.+|+..++ .|. .+|.+++ +|++.. + +|+|. |++||.....|..|+..
T Consensus 57 n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~--~c~~c~~~~~~C~~~C~~~~-g~~y~C~-C~~Gy~l~~dG~~C~~~ 130 (142)
T 2c4f_L 57 NGGSCKDQLQSYICFCLPAFEGRNCETHKD--DQLICVNENGGCEQYCSDHT-GTKRSCR-CHEGYSLLADGVSCTPT 130 (142)
T ss_dssp TTCEEEEETTEEEEECCTTEESTTSCEEGG--GCCSTTTGGGGCSSEEECCT-TSCCEEE-CCTTEEECTTSSCEEES
T ss_pred CCCEEeCCCCCEEeeCCCCccCCccccCcc--ccccccCCCCCccCEeECCC-CCCEEEE-CCCCceECCCCCCCCCC
Confidence 355 6778899999999999999997544 665 5666666 999987 7 99999 99999865557888764
No 39
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=98.85 E-value=7.6e-09 Score=91.12 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=62.3
Q ss_pred cccccee--cccCCCcceEEecCCCC--CceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCc
Q psy2060 108 DRLCRLR--ARSFPKNSFLTFPALKQ--RNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSE 183 (193)
Q Consensus 108 g~~C~~~--~~sF~g~syl~~~~~~~--~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g 183 (193)
++.|+.. +.+|.+.+|+.++.... .....|+|+|||..++|+|||.+. ....||++|+|.+|+ |+++|++|++
T Consensus 196 ~p~~~~~~~~~~F~g~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~-~~~~d~l~L~L~~G~--l~~~~~~g~~ 272 (608)
T 2wjs_A 196 SPQVEDSEGTIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLAT-RDLKDFMSVELSDGH--VKVSYDLGSG 272 (608)
T ss_dssp ------CCCCEEEEEEEEEEEECCTTCBTTEEEEEEEEEESCSEEEEEEEEC-TTSSSEEEEEEETTE--EEEEEECSSC
T ss_pred CcccccCCcceEECCCcceEEeccccCCCcceEEEEEEEeCCCCeEEEEecC-CCCCceEEEEEECCE--EEEEEECCCC
Confidence 3456553 57899999999874322 345789999999999999999874 345899999999999 9999999999
Q ss_pred eEEEEcCC
Q psy2060 184 VARLNRAD 191 (193)
Q Consensus 184 ~~~l~s~~ 191 (193)
..+++++.
T Consensus 273 ~~~l~s~~ 280 (608)
T 2wjs_A 273 MTSVVSNQ 280 (608)
T ss_dssp EEEEEEEE
T ss_pred cEEEEcCc
Confidence 88887653
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.84 E-value=5.6e-10 Score=84.84 Aligned_cols=66 Identities=18% Similarity=0.357 Sum_probs=31.8
Q ss_pred cCC--ccCCCCceeeCCCCCCCCcccccC-CCCCCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccceec
Q psy2060 44 DGG--HRTLDLLHDMGARYHWGDTCETDI-TKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 44 ~gg--~~~~~~~~C~C~~g~~G~~C~~~~-~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
+|| .+..++|.|.|++||+|..|+..+ + +|. .+|.+ +|++.. ++|.|. |++||.....|..|+...
T Consensus 52 ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~d--eC~~~~~~C~~--~C~n~~-gsy~C~-C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 52 NQGKCKDGLGEYTCTCLEGFEGKNCELFTRK--LCSLDNGDCDQ--FCHEEQ-NSVVCS-CARGYTLADNGKACIPTG 123 (195)
T ss_dssp -----------------------------CC--GGGTGGGGCSS--EEEEET-TEEEEE-CCTTEEECTTSSCEEESS
T ss_pred CCCEeECCCCCeeEeCCCCceeccccccccc--cccCCCCCCCC--EeECCC-CCeEEE-CCCCceeCCCCCccccCC
Confidence 455 677889999999999999999765 4 898 46876 999998 999999 999998655688898753
No 41
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.84 E-value=2.9e-10 Score=83.95 Aligned_cols=79 Identities=15% Similarity=0.276 Sum_probs=61.8
Q ss_pred Ccee-cCCCCc-cCCCCcceeecCCccCCCCceeeCCC--CCCCC---cccccCCCCCCC---CCCCCCcEEeeCCCCce
Q psy2060 24 PYLS-GLPDNE-GLEKRVQTFVDGGHRTLDLLHDMGAR--YHWGD---TCETDITKSDCK---GVCSPGATCSLNPSGGY 93 (193)
Q Consensus 24 ~~~c-C~~g~~-g~~~~c~~~~~gg~~~~~~~~C~C~~--g~~G~---~C~~~~~~~~C~---~pC~~gg~C~~~~~~~~ 93 (193)
.|.| |++||. |.. |+.+.+ +..++|.|.|++ ||+|. .+..+++ +|. .+|.+ ++|++.. ++|
T Consensus 74 ~~~C~C~~G~~~~~~--C~~C~~---~~~~~y~C~C~~g~G~~~~~~~~~c~did--eC~~~~~~C~~-g~C~n~~-gsy 144 (162)
T 1uzk_A 74 KASCCCSLGKAWGTP--CEMCPA---VNTSEYKILCPGGEGFRPNPITVILEDID--ECQELPGLCQG-GKCINTF-GSF 144 (162)
T ss_dssp HHHHHTTTCCEETTT--TEECCC---TTSHHHHHHCTTCTTEEECTTTCCEEECC--HHHHCGGGGBT-SEEEECS-SCE
T ss_pred CceeeCCCCCCcCCC--cccCCC---CCCCCceeECCCCCCcccCCCCCccCccc--cccCCCCCcCC-CEeEcCC-CCE
Confidence 6888 999998 665 886642 345689999998 99986 3445666 998 46987 6999998 999
Q ss_pred ecccCCCCCCccccccccc
Q psy2060 94 ICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 94 ~C~~C~~g~~~~~~g~~C~ 112 (193)
+|. |++||.+...++.|+
T Consensus 145 ~C~-C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 145 QCR-CPTGYYLNEDTRVCD 162 (162)
T ss_dssp EEE-CCTTCCBCTTTCBBC
T ss_pred Eee-CCCCccCCCCCCccC
Confidence 999 999999655566663
No 42
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.83 E-value=3.1e-09 Score=86.93 Aligned_cols=74 Identities=18% Similarity=0.345 Sum_probs=56.9
Q ss_pred Ccee-cCCCCccCCCCcceee------cCCccCCCCceeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecc
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFV------DGGHRTLDLLHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICD 96 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~------~gg~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~ 96 (193)
++.| |++||+|.. |+.+. ++|.-. ..+.|.|++||+|..|+.. .|..+|.++|+|+. .++|.
T Consensus 164 ~~~C~C~~G~~G~~--C~~~~C~~~C~~~G~C~-~~~~C~C~~G~~G~~C~~~----~C~~~C~~~G~C~~----~~~C~ 232 (324)
T 2ygq_A 164 RRICECPDGFHGPH--CEKALCTPRCMNGGLCV-TPGFCICPPGFYGVNCDKA----NCSTTCFNGGTCFY----PGKCI 232 (324)
T ss_dssp TSCEECCTTEESSS--SCEESSSSCCCTTCEEC-SSCCEECCTTCBTTTTCBC----CCSSCCCSSCCBSC----SSCBC
T ss_pred CCeEECCCCCcCCC--CCCCCCCCCCCCCCEEc-CCCEEeCCCCccCCCcccC----cCCCCCCCCCeeCC----CCeee
Confidence 5789 999999997 88642 344111 2578999999999999864 67788999999974 46899
Q ss_pred cCCCCCCccccccccce
Q psy2060 97 DCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 97 ~C~~g~~~~~~g~~C~~ 113 (193)
|++||. |..|+.
T Consensus 233 -C~~G~~----G~~C~~ 244 (324)
T 2ygq_A 233 -CPPGLE----GEQCEI 244 (324)
T ss_dssp -CCTTCC----TTTTC-
T ss_pred -CCCCcc----CCCCCc
Confidence 999998 788875
No 43
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.80 E-value=2.3e-09 Score=74.67 Aligned_cols=64 Identities=16% Similarity=0.253 Sum_probs=51.3
Q ss_pred ccCCCCceeeCCCCCCCCcccccCCCCCCC---CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETDITKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.++.++|+|.|++||+|..|+..++.++|. .+|.+ +|++.. ++|+|. |++||.+...|..|+..
T Consensus 29 ~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~-g~y~C~-C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 29 IDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEV-GWRRCS-CAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp CCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECS-SSEEEE-CCTTEEECTTSSCEEEC
T ss_pred CCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCC-CCEEeE-CCCCeeECCCCCccCcC
Confidence 677889999999999999998764223686 35554 999998 999999 99999866667778653
No 44
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.78 E-value=2.2e-09 Score=77.99 Aligned_cols=64 Identities=20% Similarity=0.483 Sum_probs=53.1
Q ss_pred cCC--ccCCCCceeeCCCCCCCCcccccCCCCCCC---CCCCCCcEE-eeCCCCceecccCCCCCCcccccccccee
Q psy2060 44 DGG--HRTLDLLHDMGARYHWGDTCETDITKSDCK---GVCSPGATC-SLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 44 ~gg--~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~---~pC~~gg~C-~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++| .+..++|.|.|++||+|..|+.. + +|. .+|.+ +| ++.. ++|+|. |++||.+...|..|+..
T Consensus 58 n~g~C~~~~~~y~C~C~~G~~G~~C~~~-d--eC~~~~~~C~~--~C~~n~~-g~y~C~-C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 58 NGGLCKDDINSYECWCQVGFEGKNCELD-A--TCNIKNGRCKQ--FCKTGAD-SKVLCS-CTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp TTCEEEECSSCEEEECCSSEESTTTCEE-C--CTTSGGGSCSS--BCCCCSS-SCCCCB-CCTTEEECTTSSSEEEC
T ss_pred CCCEeECCCCCEEEecCCCCcCCcCCCC-c--cccCCCCCCcC--CCCCCCC-CCEEeE-cCCCcEeCCCCCcCCCC
Confidence 355 67888999999999999999865 4 898 36776 89 8887 999999 99999865567888764
No 45
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.76 E-value=1.5e-09 Score=77.81 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=30.6
Q ss_pred cCC--ccCCCCceeeCCCCCCCCcccccC-CCCCCC---CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 44 DGG--HRTLDLLHDMGARYHWGDTCETDI-TKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 44 ~gg--~~~~~~~~C~C~~g~~G~~C~~~~-~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++| .+..++|.|.|++||+|..|+..+ + +|. .+|.+ +|++.. ++|+|. |++||.+...|..|+..
T Consensus 52 n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d--~C~~~~~~C~~--~C~~~~-g~y~C~-C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 52 NQGKCKDGLGEYTCTCLEGFEGKNCELFTRK--LCSLDNGDCDQ--FCHEEQ-NSVVCS-CARGYTLADNGKACIPT 122 (134)
T ss_dssp -----------------------------CC--GGGTGGGGCSS--EEEEET-TEEEEE-CCTTEEECTTSSCEEES
T ss_pred CcCCcccCCCCEEeeCCCCccCCccccCCCC--ccccCCCCCCC--EeECCC-CCEEEE-CCCCcEECCCCCccCcC
Confidence 355 677889999999999999999765 4 798 46776 999988 999999 99999865557888754
No 46
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.76 E-value=6e-11 Score=93.89 Aligned_cols=88 Identities=11% Similarity=-0.056 Sum_probs=65.5
Q ss_pred cCCCCCCcee-cCCC---CccCCCCcceeec--------CC--ccCCCCceeeCCCCCCCCcccccCCC-----------
Q psy2060 18 TNGPFQPYLS-GLPD---NEGLEKRVQTFVD--------GG--HRTLDLLHDMGARYHWGDTCETDITK----------- 72 (193)
Q Consensus 18 ~~~~~~~~~c-C~~g---~~g~~~~c~~~~~--------gg--~~~~~~~~C~C~~g~~G~~C~~~~~~----------- 72 (193)
.|.... +.+ |.|| +.|.. ++..++ || .+..++|.|.||+||+|.+|+..++.
T Consensus 7 ~n~~Gg-~s~~~~pgg~~~~g~~--~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~p 83 (267)
T 4fbr_A 7 QNQWGG-SQATWNPGGLWLIGAR--DKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAP 83 (267)
T ss_dssp EEECSS-TTSCCEEEEEEECCCC--SSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSC
T ss_pred eecCCc-ccCCcCCCCceeeccc--cccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCc
Confidence 344433 444 6666 56664 664443 66 77788999999999999999876540
Q ss_pred ----------------CCCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 73 ----------------SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ----------------~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.+|. .||.++|+|++.. .+|+|. ||.+|+ |..|+..
T Consensus 84 C~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~-~sy~C~-C~~Gf~----G~~Ce~~ 136 (267)
T 4fbr_A 84 WQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGT-TTYNGE-GPIGFK----SEVTDGD 136 (267)
T ss_dssp EEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEE-EEETTS-CCEEEE----EEECCCC
T ss_pred ccCCCeeeccCccccccccCCCCCCCCCEEecCC-ccEEee-CCCCcc----ccCCCCC
Confidence 1255 7888889999887 999999 999999 8888874
No 47
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.74 E-value=4.4e-09 Score=86.04 Aligned_cols=74 Identities=24% Similarity=0.447 Sum_probs=30.7
Q ss_pred Ccee-cCCCCccCCCCccee------ecCCccCCCCceeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecc
Q psy2060 24 PYLS-GLPDNEGLEKRVQTF------VDGGHRTLDLLHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICD 96 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~------~~gg~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~ 96 (193)
++.| |++||+|.. |+.. .++|.- ...+.|.|++||+|..|+.. .|..+|.++|+|+ +.++|.
T Consensus 196 ~~~C~C~~G~~G~~--C~~~~C~~~C~~~G~C-~~~~~C~C~~G~~G~~C~~~----~C~~~C~~~g~C~----~~~~C~ 264 (324)
T 2ygq_A 196 PGFCICPPGFYGVN--CDKANCSTTCFNGGTC-FYPGKCICPPGLEGEQCEIS----KCPQPCRNGGKCI----GKSKCK 264 (324)
T ss_dssp SCCEECCTTCBTTT--TCBCCCSSCCCSSCCB-SCSSCBCCCTTCCTTTTC-----------------------------
T ss_pred CCEEeCCCCccCCC--cccCcCCCCCCCCCee-CCCCeeeCCCCccCCCCCcC----cCCCcCCCCCEEC----CCCEEE
Confidence 5778 999999997 8753 234411 12479999999999999853 7878899999997 357899
Q ss_pred cCCCCCCccccccccce
Q psy2060 97 DCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 97 ~C~~g~~~~~~g~~C~~ 113 (193)
|++||. |..|+.
T Consensus 265 -C~~G~~----G~~C~~ 276 (324)
T 2ygq_A 265 -CSKGYQ----GDLCSK 276 (324)
T ss_dssp -----------------
T ss_pred -CCCCCc----CCCCcC
Confidence 999998 888874
No 48
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=82.89 Aligned_cols=61 Identities=16% Similarity=0.316 Sum_probs=51.9
Q ss_pred ccCCCCceeeCCCCCCCCcccccCCCCCCC----CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETDITKSDCK----GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~----~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.+..++|.|.|++||+|.+|+.+++ +|. .||.+ .|++.. ++|+|. |++||.+...+..|..
T Consensus 20 ~~~~~~~~C~C~~g~~g~~C~~~~~--eC~~~~~~~C~~--~C~~~~-g~~~C~-C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 20 QDSIWGYTCTCSPGYEGSNCELAKN--ECHPERTDGCQH--FCLPGQ-ESYTCS-CAQGYRLGEDHKQCVP 84 (317)
T ss_dssp CCCSSSCCCCCSSSCCSSSSCCCSS--SCCTTCTTSCSS--EEECCS-SSCEEE-CCTTEECCTTSSCCEE
T ss_pred ECCCCCeEEECCCCCcCCccccCcc--cCCCCCCCCCcC--ccccCC-CeeEEe-cccccccccccccccc
Confidence 5677899999999999999998876 997 58988 999988 999999 9999986545566755
No 49
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=98.67 E-value=7.5e-08 Score=80.06 Aligned_cols=69 Identities=28% Similarity=0.376 Sum_probs=58.0
Q ss_pred ccCCCcceEEe--cCCCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEE
Q psy2060 116 RSFPKNSFLTF--PALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLN 188 (193)
Q Consensus 116 ~sF~g~syl~~--~~~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~ 188 (193)
..|.+.+|+.+ +.........|+|.|||..++|+|||.+ ....||++|+|.+|+ |+++|++|++...++
T Consensus 201 ~~F~g~sy~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~--~~~~d~l~l~L~~G~--l~~~~~~g~g~~~~~ 271 (383)
T 2jd4_A 201 TFFEGSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGIS--SAKVDAIGLEIVDGK--VLFHVNNGAGRITAT 271 (383)
T ss_dssp EEEEEEEEEEEEEEEECCBSCEEEEEEEEESCSCEEEEEEE--CSSSCEEEEEEETTE--EEEEEESSSCEEEEE
T ss_pred ceECCCeEEEEecCccccCCceEEEEEEEeCCCCEEEEEec--CCCCcEEEEEEECCE--EEEEEECCCCcEEEE
Confidence 46888999998 3444455678999999999999999986 346799999999999 999999998877664
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.67 E-value=1.5e-08 Score=85.70 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=59.9
Q ss_pred ee-cCCCCccCCCCcce----eecCCccCCCCceeeCCCCCCCCcccccCCC--------CCCC--CCCCCCcEEeeCCC
Q psy2060 26 LS-GLPDNEGLEKRVQT----FVDGGHRTLDLLHDMGARYHWGDTCETDITK--------SDCK--GVCSPGATCSLNPS 90 (193)
Q Consensus 26 ~c-C~~g~~g~~~~c~~----~~~gg~~~~~~~~C~C~~g~~G~~C~~~~~~--------~~C~--~pC~~gg~C~~~~~ 90 (193)
.| |++||.|.. |+. +.++|.-..+.+.|.|++||+|.+|+...+. +.|. .+|.+++.|. .
T Consensus 186 ~c~C~~g~~G~~--C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~- 260 (423)
T 2gy5_A 186 VRRCEAQKWGPE--CNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--P- 260 (423)
T ss_dssp ECSSCTTEESTT--SCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--T-
T ss_pred CCcCCCCCCCCC--CCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--C-
Confidence 37 999999997 874 5556632336789999999999999964220 2465 6898999995 4
Q ss_pred CceecccCCCCCCccccccccce
Q psy2060 91 GGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 91 ~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
++|+|. |+++|. |..|+.
T Consensus 261 ~~~~C~-C~~G~~----G~~C~~ 278 (423)
T 2gy5_A 261 DPYGCS-CATGWK----GLQCNE 278 (423)
T ss_dssp TTTEEE-CCBTCB----SGGGCB
T ss_pred CCCeEE-eCCCcc----cccccC
Confidence 788999 999998 778775
No 51
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.64 E-value=2.5e-08 Score=55.85 Aligned_cols=35 Identities=26% Similarity=0.708 Sum_probs=31.8
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
++|. +||.++|+|++.. ++|+|. |+++|. |..|+.
T Consensus 4 d~C~~~pC~ngg~C~~~~-~~~~C~-C~~G~~----G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDI-NSYECW-CPFGFE----GKNCEL 39 (39)
T ss_dssp CTTTTCCCCTTCEEEEET-TEEEEE-CCTTCC----STTSCC
T ss_pred ccCCCCCCCCCCEeEcCC-CceEeE-CCCCCc----CCccCC
Confidence 3899 9999999999987 999999 999998 888863
No 52
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.64 E-value=1e-08 Score=67.90 Aligned_cols=49 Identities=27% Similarity=0.613 Sum_probs=42.4
Q ss_pred ccCCCCceeeCCCCCC----CCcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCCCC
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGS 103 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~ 103 (193)
.++.++|+|.|++||+ |..|+ +++ +|. +||. ++|++.. ++|+|. || ++.
T Consensus 19 ~n~~g~y~C~C~~G~~~~~~g~~C~-did--eC~~~~C~--~~C~n~~-g~y~C~-C~-g~~ 72 (87)
T 1z6c_A 19 KNIPGDFECECPEGYRYNLKSKSCE-DID--ECSENMCA--QLCVNYP-GGYTCY-CD-GKK 72 (87)
T ss_dssp CCBTTBCCCSSSTTCEEETTTTEEE-CCC--HHHHSCCS--SEECCCS-SSCCEE-CC-SSS
T ss_pred ECCCCCEEEECCCCceECCCCCcCC-CcC--eeCCCCCC--CEEEccC-CCEEEE-CC-CCc
Confidence 5788999999999999 88996 555 999 9997 6999998 999999 96 444
No 53
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=4.1e-07 Score=75.71 Aligned_cols=61 Identities=25% Similarity=0.524 Sum_probs=22.9
Q ss_pred ccCCCCceeeCCCCCC----CCcccccCCCCCCC--CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCETDITKSDCK--GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.+..++|.|.|++||+ |..| .+++ +|. .+|.++ |++.. ++|+|. |++||.....+..|+..
T Consensus 18 ~~~~g~~~C~C~~G~~l~~~~~~C-~d~~--eC~~~~~C~~~--C~~~~-g~~~C~-C~~g~~l~~d~~~C~~~ 84 (386)
T 3v65_B 18 QMIRGAVQCTCHTGYRLTEDGRTC-QDVN--ECAEEGYCSQG--CTNSE-GAFQCW-CEAGYELRPDRRSCKAL 84 (386)
T ss_dssp -------------------------------------CCTTE--EC------CCEE-CCTTEEECTTSSCEEEC
T ss_pred cCCCCCcEeECCCCceECCCCCcc-Cccc--eeCCcCcccCc--CCCCC-CCCeEE-ECCCceEcCCCCeECCc
Confidence 3667889999999998 9999 4555 997 899874 99988 999999 99998765567888753
No 54
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.45 E-value=1.2e-08 Score=60.95 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=35.8
Q ss_pred ceeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeC---CCCceecccCCCCCCcccccccccee
Q psy2060 53 LHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLN---PSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 53 ~~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~---~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+.|.|++||+ . +||.|||+|+.. ..++|.|. |+.+|. |.+||..
T Consensus 3 ~~C~C~~g~~------~-------~pC~NGGtC~~~~~~~~~~y~C~-C~~Gf~----G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCPETFD------A-------WYCLNDAHCFAVKIADLPVYSCE-CAIGFM----GQRCEYK 49 (52)
T ss_dssp CCBCCCHHHH------H-------HTSCTTCEEEEEEETTEEEEEEE-CCTTEE----STTSCEE
T ss_pred eeeECCCCCc------C-------CcCCCCCEEecCccCCCCCEEEE-CCCCCc----CCCCccc
Confidence 5788988886 1 689999999963 22689999 999998 9999864
No 55
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=98.45 E-value=1e-06 Score=73.56 Aligned_cols=69 Identities=20% Similarity=0.270 Sum_probs=56.1
Q ss_pred ccCCCcceEEec-CCCCCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEEEEEEeCCCceEEEE
Q psy2060 116 RSFPKNSFLTFP-ALKQRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSVQFSWSLGSEVARLN 188 (193)
Q Consensus 116 ~sF~g~syl~~~-~~~~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l~~~~~~g~g~~~l~ 188 (193)
..|.+.+|+.+. .........|+|.|||..++|+|||.+ ....||++|+|.+|+ |+++|++|++...++
T Consensus 214 ~~F~g~gy~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~--~~~~~~l~l~L~~G~--l~~~~~~g~~~~~~~ 283 (394)
T 1dyk_A 214 TYFDGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVS--SQKMDGMGIEMIDEK--LMFHVDNGAGRFTAI 283 (394)
T ss_dssp EEEEEEEEEECCSSBCCBSEEEEEEEEEESCSCEEEEEEE--CSSSCEEEEEEETTE--EEEEEESSSCCEEEE
T ss_pred ceeCCCceeEEcCCcccCCceEEEEEEEeCCCCEEEEEec--CCCCCEEEEEEECCE--EEEEEECCCCcEEEE
Confidence 457788998764 233345678999999999999999985 346799999999999 999999998866554
No 56
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.42 E-value=4.9e-08 Score=83.47 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=30.3
Q ss_pred ee-cCCCCccCCCCccee------ecCCccCCCCceeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecccC
Q psy2060 26 LS-GLPDNEGLEKRVQTF------VDGGHRTLDLLHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDC 98 (193)
Q Consensus 26 ~c-C~~g~~g~~~~c~~~------~~gg~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C 98 (193)
.+ |.++|.|.. |+.+ .| |.- ...+.|.|++||+|..|+.. .|..+|.++|+|+.. ++|. |
T Consensus 378 p~~C~~~~~g~~--c~~~~C~~~C~n-G~C-~~~~~C~C~~G~~G~~C~~~----~C~~~C~~~g~C~~~----~~C~-C 444 (463)
T 2wg3_C 378 PEECRATVQPAQ--TLTSECSRLCRN-GYC-TPTGKCCCSPGWEGDFCRTA----KCEPACRHGGVCVRP----NKCL-C 444 (463)
T ss_dssp CGGGCCCCCCCC--CCCCHHHHHCCS-EEE-CTTSCEEECTTEESTTSCEE----CC-----------------------
T ss_pred cccCCCCCcCCC--CccccccCCCCC-Ccc-CCCCeECCCCCcCCCcCCcC----cCCCCCCCCCEECCC----CEEE-C
Confidence 36 999999996 7642 22 311 12358999999999999754 888899999999843 6899 9
Q ss_pred CCCCCcccccccccee
Q psy2060 99 SLAGSYEHYDRLCRLR 114 (193)
Q Consensus 99 ~~g~~~~~~g~~C~~~ 114 (193)
+++|. |..|+..
T Consensus 445 ~~G~~----G~~C~~~ 456 (463)
T 2wg3_C 445 KKGYL----GPQCEQV 456 (463)
T ss_dssp ----------------
T ss_pred CCCcc----cCCCCCC
Confidence 99999 9999864
No 57
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.41 E-value=1.6e-07 Score=83.69 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=57.0
Q ss_pred Ccee-cC----CCCccCCCCcceeec------------CCccCCCCceeeCCCCCCCCccc--ccCCCCCCC----CCCC
Q psy2060 24 PYLS-GL----PDNEGLEKRVQTFVD------------GGHRTLDLLHDMGARYHWGDTCE--TDITKSDCK----GVCS 80 (193)
Q Consensus 24 ~~~c-C~----~g~~g~~~~c~~~~~------------gg~~~~~~~~C~C~~g~~G~~C~--~~~~~~~C~----~pC~ 80 (193)
.+.| |+ +||+|.. |+.+++ +|.-. .+.|.|++||+|..|+ ...+ .|. .+|.
T Consensus 503 ~g~C~C~~~~~~Gy~G~~--Ce~~~~~C~~~~~~~C~~~G~C~--~g~C~C~~Gy~G~~CeC~~~~~--~C~~~~g~~C~ 576 (690)
T 3fcs_B 503 CGQCVCHSSDFGKITGKY--CECDDFSCVRYKGEMCSGHGQCS--CGDCLCDSDWTGYYCNCTTRTD--TCMSSNGLLCS 576 (690)
T ss_dssp SSSEEECCCSSCCCBSTT--SCBCSSCCCBSSSSBGGGSEEEE--TTEEEECTTEESSSSCEECCCT--TTBCTTSSBTS
T ss_pred CCeeEeecCCCCCeeCCC--cCcccCcCcCCCCCCCCCCCEec--CCeeECcCCCcCCCCccCCCCC--cccCCCCCCCC
Confidence 4678 99 9999998 975432 22111 2899999999999999 3433 887 5899
Q ss_pred CCcEEeeCCCCceecccC-CCCCCccccccccce
Q psy2060 81 PGATCSLNPSGGYICDDC-SLAGSYEHYDRLCRL 113 (193)
Q Consensus 81 ~gg~C~~~~~~~~~C~~C-~~g~~~~~~g~~C~~ 113 (193)
++|+|+. + +|. | ++||. |..|+.
T Consensus 577 ~~G~C~~---g--~C~-C~~~Gy~----G~~Ce~ 600 (690)
T 3fcs_B 577 GRGKCEC---G--SCV-CIQPGSY----GDTCEK 600 (690)
T ss_dssp SSCEEET---T--EEE-CCSTTCB----STTSCB
T ss_pred CCCEEeC---C--EEE-CCCCCcc----CCCcCc
Confidence 9999974 2 899 9 99998 888886
No 58
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.41 E-value=9.1e-08 Score=85.22 Aligned_cols=70 Identities=23% Similarity=0.273 Sum_probs=55.9
Q ss_pred e-cCCCCccCCCCcceee--------c-------------CCccCCCCceeeCC----CCCCCCcccccCCCCCCC----
Q psy2060 27 S-GLPDNEGLEKRVQTFV--------D-------------GGHRTLDLLHDMGA----RYHWGDTCETDITKSDCK---- 76 (193)
Q Consensus 27 c-C~~g~~g~~~~c~~~~--------~-------------gg~~~~~~~~C~C~----~g~~G~~C~~~~~~~~C~---- 76 (193)
| |++||+|.. |+..+ + +|.-. .+.|.|+ +||+|..|+.+.+ .|.
T Consensus 460 C~C~~Gy~G~~--Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~~~--~C~~~~~ 533 (690)
T 3fcs_B 460 CRCGPGWLGSQ--CECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECDDF--SCVRYKG 533 (690)
T ss_dssp EEECTTCCSSS--SCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBCSS--CCCBSSS
T ss_pred eEeCCCccCCc--eeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcccC--cCcCCCC
Confidence 8 999999998 87654 1 11111 3689999 9999999997655 898
Q ss_pred CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 77 GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 77 ~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.+|.++|+|+. ++|. |++||. |..|+
T Consensus 534 ~~C~~~G~C~~-----g~C~-C~~Gy~----G~~Ce 559 (690)
T 3fcs_B 534 EMCSGHGQCSC-----GDCL-CDSDWT----GYYCN 559 (690)
T ss_dssp SBGGGSEEEET-----TEEE-ECTTEE----SSSSC
T ss_pred CCCCCCCEecC-----CeeE-CcCCCc----CCCCc
Confidence 38999999974 6899 999998 88887
No 59
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.40 E-value=2.5e-07 Score=55.35 Aligned_cols=38 Identities=26% Similarity=0.671 Sum_probs=32.6
Q ss_pred CCC-C---CCCCCcEEe--eCCCCceecccCCCCCCccccccccceeccc
Q psy2060 74 DCK-G---VCSPGATCS--LNPSGGYICDDCSLAGSYEHYDRLCRLRARS 117 (193)
Q Consensus 74 ~C~-~---pC~~gg~C~--~~~~~~~~C~~C~~g~~~~~~g~~C~~~~~s 117 (193)
+|. . ||.|||+|+ +.. ++|.|. |++||+ |..|+.....
T Consensus 5 ~C~~~~~~pC~ngg~C~~~~~~-~~~~C~-C~~G~~----G~~Ce~~~~~ 48 (53)
T 1egf_A 5 GCPSSYDGYCLNGGVCMHIESL-DSYTCN-CVIGYS----GDRCQTRDLR 48 (53)
T ss_dssp CCCTTSSCSSCSSCEEEEESSS-SCEEEE-CCTTCC----SSSSCCCSCC
T ss_pred cCCCCCCCcCCCCcEEEeeCCC-CCEEEE-CCCCCc----CCcCCccCcc
Confidence 787 6 999999999 565 999999 999998 9999876543
No 60
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.39 E-value=2.1e-07 Score=77.89 Aligned_cols=60 Identities=23% Similarity=0.470 Sum_probs=51.3
Q ss_pred ccCCCCceeeCCCCCC---CCcccccCCCCCCC--CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 47 HRTLDLLHDMGARYHW---GDTCETDITKSDCK--GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~---G~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.++.++|.|.|++||. |..|+ +++ +|. .+|.+ .|++.. ++|.|. |++||.....+..|..
T Consensus 15 ~~~~~~y~C~C~~G~~~~~~~~C~-did--eC~~~~~C~~--~C~n~~-g~~~C~-C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 15 NDLKIGYECLCPDGFQLVAQRRCE-DID--ECQDPDTCSQ--LCVNLE-GGYKCQ-CEEGFQLDPHTKACKA 79 (400)
T ss_dssp EECSSSEEEECCTTEEECSSSCEE-ECC--CCSTTSSCSS--CCBCCS-SSCBCC-CCTTCCCCTTTSSCCC
T ss_pred ECCCCCeEEECCCCCCcCCCCccc-Cch--hhhccCCCCC--ccCCCc-cceeee-ccccccccccccceee
Confidence 5788999999999998 89997 555 998 89976 899998 999999 9999987666677754
No 61
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.36 E-value=3e-07 Score=61.29 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=36.4
Q ss_pred CCCcee-cCCCCccCCCCcc-eeec---------CC--ccCC--CCceeeCCCCCCCCcccccCC
Q psy2060 22 FQPYLS-GLPDNEGLEKRVQ-TFVD---------GG--HRTL--DLLHDMGARYHWGDTCETDIT 71 (193)
Q Consensus 22 ~~~~~c-C~~g~~g~~~~c~-~~~~---------gg--~~~~--~~~~C~C~~g~~G~~C~~~~~ 71 (193)
...|.| |++||+ . |+ +++| || .+.. ++|.|.|++||+|.+|+.+++
T Consensus 29 ~~~y~C~C~~G~~--~--C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 29 NRVEYCWCNSGRA--Q--CHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp SCEEEEECSSSCC--B--CCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSS
T ss_pred CCCcEeECCCCCc--c--cccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCC
Confidence 457889 999998 3 87 4443 56 5555 899999999999999998765
No 62
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.34 E-value=3.3e-07 Score=80.77 Aligned_cols=58 Identities=19% Similarity=0.313 Sum_probs=47.9
Q ss_pred ccCCC-Ccee-eCCCCCCC--CcccccCCCCCCC-CC--CCCCc---EEeeCCCCceecccCCCCCCccccccccc
Q psy2060 47 HRTLD-LLHD-MGARYHWG--DTCETDITKSDCK-GV--CSPGA---TCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 47 ~~~~~-~~~C-~C~~g~~G--~~C~~~~~~~~C~-~p--C~~gg---~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.++.+ +|+| .|++||+| ..|+ .++ +|. .| |.+++ +|++.. ++|+|..|++||. |..|+
T Consensus 18 ~n~~~Gsy~C~~C~~GytGdg~~Ce-DiD--EC~~~p~~C~~gg~~~~CvNt~-gsY~C~~C~~Gy~----G~~c~ 85 (634)
T 1yo8_A 18 SSFPDGSWSCGFCPVGFLGNGTHCE-DLD--ECALVPDICFSTSKVPRCVNTQ-PGFHCLPCPPRYR----GNQPV 85 (634)
T ss_dssp EECTTSCEEECCCCTTBCSCSSSCC-BCC--TTTTSCCCSCCCSSSCCEEECS-SSEEECCCCTTEE----ECCCE
T ss_pred ecCCCCCeECCcCCCccCCCCCCcc-ccc--cccCCCCcccCCccccceeecc-CceecccCCCCcc----cCccc
Confidence 45554 4999 99999998 8997 555 999 77 99999 999998 9999955999998 55543
No 63
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.33 E-value=2.9e-07 Score=63.87 Aligned_cols=63 Identities=16% Similarity=0.022 Sum_probs=43.3
Q ss_pred cCCCCCCcee-cCCCCccCCCCcceeec--------CC-----ccCCCCceeeCCCCCC----CCcccccCCCCCCCCCC
Q psy2060 18 TNGPFQPYLS-GLPDNEGLEKRVQTFVD--------GG-----HRTLDLLHDMGARYHW----GDTCETDITKSDCKGVC 79 (193)
Q Consensus 18 ~~~~~~~~~c-C~~g~~g~~~~c~~~~~--------gg-----~~~~~~~~C~C~~g~~----G~~C~~~~~~~~C~~pC 79 (193)
.|.+ ..|.| |++||+|.. |+..++ ++ .++.++|+|.|++||+ |..|+.... .||
T Consensus 29 ~~~~-~~y~C~C~~G~~G~~--C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~-----~pC 100 (114)
T 1aut_L 29 IDGI-GSFSCDCRSGWEGRF--CQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK-----FPC 100 (114)
T ss_dssp CCCS-SCCCEEECTTEESTT--SCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS-----SCT
T ss_pred CCCC-CCcEeeCCCCCcCCC--cCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc-----cCC
Confidence 3443 56889 999999997 986532 22 6788999999999999 456653322 789
Q ss_pred CCCcEEeeC
Q psy2060 80 SPGATCSLN 88 (193)
Q Consensus 80 ~~gg~C~~~ 88 (193)
.+++.|++.
T Consensus 101 ~~~~~~i~~ 109 (114)
T 1aut_L 101 GRPWKRMEK 109 (114)
T ss_dssp TCCC-----
T ss_pred CCCCccCCC
Confidence 998888764
No 64
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.31 E-value=3.3e-07 Score=52.90 Aligned_cols=35 Identities=23% Similarity=0.532 Sum_probs=30.0
Q ss_pred CCC-C---CCCCCcEEe--eCCCCceecccCCCCCCcccccccccee
Q psy2060 74 DCK-G---VCSPGATCS--LNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~-~---pC~~gg~C~--~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. . ||.|||+|+ +.. ++|+|. |++||+ |..|+..
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~-~~~~C~-C~~G~~----G~~Ce~~ 42 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESL-DSYTCN-CVIGYS----GDRCQTR 42 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTT-SSEEEE-CCTTEE----TTTTCEE
T ss_pred CcccCCCCCCCCCCEEEeecCC-CCEEEE-cCCCCc----CCcCCcc
Confidence 566 6 999999998 444 899999 999998 9999865
No 65
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.27 E-value=2.4e-07 Score=68.71 Aligned_cols=15 Identities=13% Similarity=0.246 Sum_probs=8.1
Q ss_pred eeeCCCCCCCCcccc
Q psy2060 54 HDMGARYHWGDTCET 68 (193)
Q Consensus 54 ~C~C~~g~~G~~C~~ 68 (193)
.|.|++||+|..|+.
T Consensus 51 ~C~C~~G~~G~~C~~ 65 (169)
T 2vj2_A 51 NKTCMEGWMGPECNR 65 (169)
T ss_dssp CEEECTTEESTTSCE
T ss_pred eeECCCCCcCCCCCC
Confidence 345555555555553
No 66
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=98.26 E-value=3e-06 Score=71.42 Aligned_cols=67 Identities=12% Similarity=0.122 Sum_probs=51.3
Q ss_pred ccCCCcceEEecCCC----------CCceeEEEEEEEeCCCCeEEEEeecCCCCCceEEEEecCCeeEE-------EEEE
Q psy2060 116 RSFPKNSFLTFPALK----------QRNRLHIKLQFSTLHDSGLLLYNGRYNERHDFIALELTDSGRSV-------QFSW 178 (193)
Q Consensus 116 ~sF~g~syl~~~~~~----------~~~~~~i~~~f~T~~~~glLl~~g~~~~~~dfi~l~l~~G~~~l-------~~~~ 178 (193)
..|.+.+|+.|+... ....+.|+|.|||..++|+|||.+......||++|+|.+|+ + ++.+
T Consensus 222 ~~F~g~s~~~~~~~~~~lp~~~~~~~~~~~~is~~fRT~~~~GlLl~~~~~~~~~d~l~l~L~~G~--le~~~~~~~l~~ 299 (422)
T 1h30_A 222 SFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYH--STKKLKKQLVVL 299 (422)
T ss_dssp EEECSSCCEEECCCCBC--------CCBCEEEEEEEEESSSCEEEEEEEEGGGTEEEEEEEEESCC-------CCCEEEE
T ss_pred ceECCCeEEEEecCccccccccccccccceEEEEEEecCCCCEEEEEecCCCcCCCcEEEEEEcCc--cccccccceEEE
Confidence 468889999886422 12357899999999999999998631122799999999999 7 6888
Q ss_pred eCCCce
Q psy2060 179 SLGSEV 184 (193)
Q Consensus 179 ~~g~g~ 184 (193)
+.+++.
T Consensus 300 ~~~~g~ 305 (422)
T 1h30_A 300 AVEHTA 305 (422)
T ss_dssp EETTEE
T ss_pred EeCCee
Confidence 888776
No 67
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.23 E-value=3.2e-07 Score=66.05 Aligned_cols=47 Identities=26% Similarity=0.417 Sum_probs=40.8
Q ss_pred CceeeCCCCCCC---------CcccccCCCCCCC-C---CCCCCcEEeeCCCCceecccCCCCCC
Q psy2060 52 LLHDMGARYHWG---------DTCETDITKSDCK-G---VCSPGATCSLNPSGGYICDDCSLAGS 103 (193)
Q Consensus 52 ~~~C~C~~g~~G---------~~C~~~~~~~~C~-~---pC~~gg~C~~~~~~~~~C~~C~~g~~ 103 (193)
.|.|.|++||+| ..|+ +++ +|. . ||.++++|++.. ++|+|. |++||.
T Consensus 18 ~~~C~C~~G~~g~~~~~~~~~~~C~-did--eC~~~~~~~C~~~~~C~n~~-g~y~C~-C~~Gy~ 77 (143)
T 2bou_A 18 ATACRCNPGFSSFSEIITTPMETCD-DIN--ECATLSKVSCGKFSDCWNTE-GSYDCV-CSPGYE 77 (143)
T ss_dssp SSCEEECTTEECSSSSBCSTTCCCE-ECC--GGGC----CCCTTEEEEECS-SCEEEE-ECTTEE
T ss_pred CCEEeCCCCCcCccccccCCCCcCC-ccc--cccCCCCCCCCCCCEEEcCC-CCeEeE-CCCCcc
Confidence 499999999998 5785 444 998 4 899999999998 999999 999998
No 68
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.23 E-value=4.5e-07 Score=80.65 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=55.8
Q ss_pred ee-cC------CCCccCCCCcceeec--------------CCccCCCCceeeCCCCCCCCcccccCCCCCCC-C---CCC
Q psy2060 26 LS-GL------PDNEGLEKRVQTFVD--------------GGHRTLDLLHDMGARYHWGDTCETDITKSDCK-G---VCS 80 (193)
Q Consensus 26 ~c-C~------~g~~g~~~~c~~~~~--------------gg~~~~~~~~C~C~~g~~G~~C~~~~~~~~C~-~---pC~ 80 (193)
.| |+ +||+|.. |+.+.+ +|.-. ...|.|++||+|..|+...+.+.|. . +|.
T Consensus 494 ~C~C~~~~~~~~G~~G~~--Ce~~~~~C~~~~~~~C~~~~~G~C~--~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs 569 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIYGQY--CECDTINCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQCERTTEGCLNPRRVECS 569 (687)
T ss_dssp EEEECCCCSTTCCEESTT--SCEESSCSCEETTEETSHHHHEEEE--TTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTS
T ss_pred EEEcCCCCCCCCCccccc--cccccccccCCCCcCcCCCCCCeEE--CCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCC
Confidence 68 99 9999998 984332 11101 1389999999999999543224887 4 899
Q ss_pred CCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 81 PGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 81 ~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
++|+|+. .+|. |++||. |..|+.
T Consensus 570 ~~G~C~~-----g~C~-C~~Gy~----G~~Ce~ 592 (687)
T 3k6s_B 570 GRGRCRC-----NVCE-CHSGYQ----LPLCQE 592 (687)
T ss_dssp SSCCBCS-----SCBC-CSTTCC----TTTTCC
T ss_pred CCCcCCC-----CEEE-CCCCCc----CCCCCC
Confidence 9999974 3699 999998 888886
No 69
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.18 E-value=4.3e-07 Score=56.26 Aligned_cols=35 Identities=26% Similarity=0.704 Sum_probs=30.8
Q ss_pred CCC-CCCCCCcEEee-----CCCCceecccCCCCCCcccccccccee
Q psy2060 74 DCK-GVCSPGATCSL-----NPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~-----~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. +||.|||+|++ .. ++|.|. |++||+ |..|+..
T Consensus 8 ~C~~~pC~ngG~C~~~~~~~~~-~~y~C~-C~~Gf~----G~~Ce~~ 48 (63)
T 1hae_A 8 EKEKTFCVNGGECFMVKDLSNP-SRYLCK-CQPGFT----GARCTEN 48 (63)
T ss_dssp HHHHTTSCTTCEEEEEESSSSS-CCEEEE-CCTTEE----STTSCEE
T ss_pred CCCCCcCCCCcEEecCCccCCC-CCEEEE-CCCCCc----CCccCcC
Confidence 677 99999999997 44 899999 999998 9999865
No 70
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.08 E-value=2.4e-06 Score=61.51 Aligned_cols=54 Identities=24% Similarity=0.286 Sum_probs=41.1
Q ss_pred CCcee-cCCCCccCCCCcceeec---------CC-----ccCCC-CceeeCCCCCC----CCcccccCCCCCCC-CCC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTFVD---------GG-----HRTLD-LLHDMGARYHW----GDTCETDITKSDCK-GVC 79 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~~~---------gg-----~~~~~-~~~C~C~~g~~----G~~C~~~~~~~~C~-~pC 79 (193)
+.|.| |++||+|.. |+.+++ ++ .++.+ +|+|.|++||+ |.+|+.... .+|. .|+
T Consensus 66 g~y~C~C~~G~~G~~--C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e-~pCg~~p~ 140 (142)
T 2c4f_L 66 QSYICFCLPAFEGRN--CETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE-YPCGKIPI 140 (142)
T ss_dssp TEEEEECCTTEESTT--SCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESSS-SCTTCCTT
T ss_pred CCEEeeCCCCccCCc--cccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCCc-cCCCCCCC
Confidence 46889 999999997 987432 33 56778 99999999999 999986543 3565 554
No 71
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.06 E-value=1.1e-06 Score=67.80 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=55.9
Q ss_pred cee-cCCCCccCCCCcceeec----------------------CCccCCCCceeeCCCC------CCCCcccccCCCCCC
Q psy2060 25 YLS-GLPDNEGLEKRVQTFVD----------------------GGHRTLDLLHDMGARY------HWGDTCETDITKSDC 75 (193)
Q Consensus 25 ~~c-C~~g~~g~~~~c~~~~~----------------------gg~~~~~~~~C~C~~g------~~G~~C~~~~~~~~C 75 (193)
..| |.+||+|.. |+...+ +|.-. ...|.|++| |+|..|+.+.. .|
T Consensus 107 g~C~C~~G~~G~~--Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G~~Ce~~~~--~C 180 (217)
T 2p28_B 107 GICRCDTGYIGKN--CECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI--NC 180 (217)
T ss_dssp TEEEECTTEESTT--SCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--TTEEEECCCCSTTCCEESTTSCEESS--CS
T ss_pred CEEECCCCccCCc--ccccCcccccccCCCcCCCCCCCCCCCCCCEEe--CCceECCCCCCCcccEECCCcccCCc--cC
Confidence 358 999999998 885432 11000 247999999 69999997654 89
Q ss_pred C-C---CCCCC--cEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 76 K-G---VCSPG--ATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 76 ~-~---pC~~g--g~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
. . +|.++ |+|.. + +|. |.+||. |..|+.
T Consensus 181 ~~~~g~~C~~~~~G~C~~---g--~C~-C~~G~~----G~~C~~ 214 (217)
T 2p28_B 181 ERYNGQVCGGPGRGLCFC---G--KCR-CHPGFE----GSACQH 214 (217)
T ss_dssp CEETTEETTCTTTEEEET---T--EEE-ECTTEE----STTSCE
T ss_pred CCCCCCCCCCCCCcEEeC---C--eeE-CCCCCc----cCCcCC
Confidence 8 4 89988 99983 2 799 999998 999975
No 72
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.05 E-value=8e-07 Score=53.10 Aligned_cols=34 Identities=24% Similarity=0.582 Sum_probs=29.4
Q ss_pred CCCCCCcEEe--eCCCCceecccCCCCCCccccccccceecc
Q psy2060 77 GVCSPGATCS--LNPSGGYICDDCSLAGSYEHYDRLCRLRAR 116 (193)
Q Consensus 77 ~pC~~gg~C~--~~~~~~~~C~~C~~g~~~~~~g~~C~~~~~ 116 (193)
+||.|||+|+ +.. ++|.|. |++||+ |.+|+....
T Consensus 12 ~pC~nGG~C~~~~~~-~~~~C~-C~~Gyt----G~~Ce~~~~ 47 (53)
T 1nql_B 12 GYCLHDGVCMYIEAL-DKYACN-CVVGYI----GERCQYRDL 47 (53)
T ss_dssp CEECTTCEEEEETTT-TEEEEE-ECTTEE----STTSCEECS
T ss_pred CCCCCCeEEeeecCC-CCEEEe-cCCCCc----CCCCCcCCc
Confidence 8999999998 444 899999 999999 999987643
No 73
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.04 E-value=1.1e-06 Score=66.59 Aligned_cols=53 Identities=23% Similarity=0.249 Sum_probs=25.1
Q ss_pred CCcee-cCCCCccCCCCcceee-c------CC-----ccCCCCceeeCCCCCC----CCcccccCCCCCCCCCCCCC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTFV-D------GG-----HRTLDLLHDMGARYHW----GDTCETDITKSDCKGVCSPG 82 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~~-~------gg-----~~~~~~~~C~C~~g~~----G~~C~~~~~~~~C~~pC~~g 82 (193)
+.|.| |++||+|.. |+.++ | ++ .+..++|.|.|++||+ |..|+.... .||.+.
T Consensus 61 g~y~C~C~~Gf~G~~--Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~~-----~PC~~~ 130 (195)
T 1nfu_B 61 GEYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP-----YPCGKQ 130 (195)
T ss_dssp ----------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS-----SCTTCC
T ss_pred CCeeEeCCCCceecc--ccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccCCC-----CCCCCC
Confidence 46889 999999997 98765 3 12 5778899999999999 899986543 566653
No 74
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.00 E-value=6.5e-06 Score=73.66 Aligned_cols=60 Identities=23% Similarity=0.470 Sum_probs=50.6
Q ss_pred ccCCCCceeeCCCCCC---CCcccccCCCCCCC--CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 47 HRTLDLLHDMGARYHW---GDTCETDITKSDCK--GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~---G~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.++.++|.|.|++||. |..|+ +++ +|. .+|.+ .|++.. ++|+|. |++||.+...+..|..
T Consensus 309 ~~~~~~~~C~C~~G~~~~~~~~C~-did--eC~~~~~C~~--~C~n~~-g~y~C~-C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 309 NDLKIGYECLCPDGFQLVAQRRCE-DID--ECQDPDTCSQ--LCVNLE-GGYKCQ-CEEGFQLDPHTKACKA 373 (699)
T ss_dssp CCCTTCCCCCCCSSSCCCSSSCCC-CCC--CCSSSSSCTT--TCCBCS-SCBCCC-CCSSCBCCSSCCCCBC
T ss_pred ccCCCCcEEeCCCCeEcCCCCccc-Ccc--ccCCCCcccc--ccccCC-CCeeee-eecccccCCCCCcccc
Confidence 6778999999999999 78898 555 998 78964 899998 999999 9999987655677754
No 75
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.98 E-value=1.2e-06 Score=61.13 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=42.7
Q ss_pred ccC-CCCceeeCCCCCCCCcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 47 HRT-LDLLHDMGARYHWGDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 47 ~~~-~~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.++ .++|.|.|++||+|..++...=.++|. .+|. ++|++ . ++|+|. |++||.+.. |..|+.
T Consensus 17 ~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~-~-~~y~C~-C~~Gy~~~~-g~~C~d 79 (118)
T 1dx5_I 17 QPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDP-N-TQASCE-CPEGYILDD-GFICTD 79 (118)
T ss_dssp EECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECT-T-STTCEE-CCTTEEEET-TTEEEE
T ss_pred CCCCCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccC-C-CCeEeE-CCCCccCCC-CCcccc
Confidence 466 789999999999998653220001455 6665 68987 5 899999 999987432 567753
No 76
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.96 E-value=1.7e-06 Score=53.20 Aligned_cols=36 Identities=28% Similarity=0.604 Sum_probs=30.8
Q ss_pred CCCC-CCCCCC--cEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 73 SDCK-GVCSPG--ATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 73 ~~C~-~pC~~g--g~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
++|. +||.+| |+|++.. ++|.|. |++||.. |..|+.
T Consensus 12 d~C~snPC~nga~gtC~~~~-g~y~C~-C~~Gy~~---G~~C~~ 50 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETN-SGYICR-CNQGYRI---SLDGTG 50 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECS-SEEEEE-CCTTEEE---EECSSS
T ss_pred CcCcCCCCcCCCccccccCC-CceEeE-CCCCCcc---CCCCCC
Confidence 4899 999999 8999998 999999 9999862 567764
No 77
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.91 E-value=0.00015 Score=65.80 Aligned_cols=60 Identities=23% Similarity=0.470 Sum_probs=49.9
Q ss_pred ccCCCCceeeCCCCCC---CCcccccCCCCCCC--CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 47 HRTLDLLHDMGARYHW---GDTCETDITKSDCK--GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~---G~~C~~~~~~~~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.++.++|.|.|++||. |..|+ +++ +|. .+|. ..|++.. ++|+|. |++||.....+..|..
T Consensus 327 ~~~~~~y~C~C~~Gy~l~~g~~C~-did--eC~~~~~C~--~~C~n~~-gsy~C~-C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 327 NDLKIGYECLCPDGFQLVAQRRCE-DID--ECQDPDTCS--QLCVNLE-GGYKCQ-CEEGFQLDPHTKACKA 391 (791)
T ss_dssp EECSBSEEEECCTTCEEETTTEEE-CCC--CCSSSSSCT--TTCCBCS-SCBCCC-CCSSEECCSSCCCCEE
T ss_pred cCCCCCcccCCCCCCccCCCCccc-cCc--ccCCCCCCC--CeeecCC-CCceee-cCCCCEeCCCCceeee
Confidence 6778999999999995 88998 554 998 6775 4899998 999999 9999986656777865
No 78
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.90 E-value=1.4e-06 Score=77.44 Aligned_cols=73 Identities=19% Similarity=0.351 Sum_probs=55.2
Q ss_pred Ccee-cCCCCccCCCCcceeec----------------------CCccCCCCceeeCC------CCCCCCcccccCCCCC
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFVD----------------------GGHRTLDLLHDMGA------RYHWGDTCETDITKSD 74 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~~----------------------gg~~~~~~~~C~C~------~g~~G~~C~~~~~~~~ 74 (193)
...| |.+||+|.. |+...+ +|.-. ...|.|+ +||+|..|+.+.. .
T Consensus 445 ~g~C~C~~Gy~G~~--Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~~~--~ 518 (687)
T 3k6s_B 445 CGICRCDTGYIGKN--CECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI--N 518 (687)
T ss_dssp SSSEEECSSEESTT--SCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEESS--C
T ss_pred CCEeEcCCCCcCCc--ccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEEEcCCCCCCCCCccccccccccc--c
Confidence 3458 999999998 984332 11000 1389999 9999999997654 8
Q ss_pred CC----CCCCC--CcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 75 CK----GVCSP--GATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 75 C~----~pC~~--gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
|. .+|.+ +|+|.. + +|. |++||. |..|+
T Consensus 519 C~~~~~~~C~~~~~G~C~~---g--~C~-C~~G~~----G~~Ce 552 (687)
T 3k6s_B 519 CERYNGQVCGGPGRGLCFC---G--KCR-CHPGFE----GSACQ 552 (687)
T ss_dssp SCEETTEETSHHHHEEEET---T--EEE-ECTTCC----STTSC
T ss_pred ccCCCCcCcCCCCCCeEEC---C--EEE-cCCCCc----CCCCc
Confidence 98 37998 899983 2 799 999998 88887
No 79
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.88 E-value=6.5e-07 Score=53.27 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=30.3
Q ss_pred ee-cCCCCccCCCCcceeecCC--cc----CCCCceeeCCCCCCCCccccc
Q psy2060 26 LS-GLPDNEGLEKRVQTFVDGG--HR----TLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 26 ~c-C~~g~~g~~~~c~~~~~gg--~~----~~~~~~C~C~~g~~G~~C~~~ 69 (193)
.| |++||+... +.||| .+ ..++|.|.|++||+|.+|+..
T Consensus 4 ~C~C~~g~~~~p-----C~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 4 TYKCPETFDAWY-----CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CBCCCHHHHHHT-----SCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeECCCCCcCCc-----CCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 37 999998544 45777 32 356899999999999999864
No 80
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.87 E-value=3.2e-06 Score=60.23 Aligned_cols=46 Identities=24% Similarity=0.253 Sum_probs=21.3
Q ss_pred CCcee-cCCCCccCCCCcceee-c------CC-----ccCCCCceeeCCCCCC----CCcccccC
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTFV-D------GG-----HRTLDLLHDMGARYHW----GDTCETDI 70 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~~-~------gg-----~~~~~~~~C~C~~g~~----G~~C~~~~ 70 (193)
+.|.| |++||+|.. |+..+ | ++ .++.++|.|.|++||+ |.+|+...
T Consensus 61 ~~y~C~C~~G~~G~~--C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 61 GEYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp ----------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCEEeeCCCCccCCc--cccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 46889 999999997 98755 3 22 5778899999999999 99998654
No 81
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.83 E-value=8e-06 Score=70.76 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=15.6
Q ss_pred CCceeeCCCCCCCCccccc--------CCCCCCC-CCCCCCcEEeeCC-CCceecccCCCCCCccccccccce
Q psy2060 51 DLLHDMGARYHWGDTCETD--------ITKSDCK-GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 51 ~~~~C~C~~g~~G~~C~~~--------~~~~~C~-~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
..+.|.|++||+|.+|+.- .+.+.|. .+|.+++.|...- ...++|. |++||. |..|++
T Consensus 458 ~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~-C~~G~~----G~~Ceq 525 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCS-CLPHMI----GRQCNE 525 (525)
T ss_dssp TTCCBCBCTTCCSTTTCC-------------------------------------------------------
T ss_pred CCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeE-CCCCCc----CCCCCC
Confidence 4568999999999999741 1123688 8899988876541 1455899 999999 999974
No 82
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.83 E-value=8.8e-06 Score=47.02 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=27.3
Q ss_pred CCCCCCcEEeeCC-CCceecccCCCCCCcccccccccee
Q psy2060 77 GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 77 ~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+||.| |+|++.. .++|.|. |++||+ |.+|+..
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~-C~~Gyt----G~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCR-CEVGYT----GVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEE-ECTTCS----STTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEE-CCCCCc----cCCCCcc
Confidence 79999 7999753 2689999 999999 9999864
No 83
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.83 E-value=6.1e-06 Score=49.55 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=19.8
Q ss_pred cCCCCceeeCCCCCCCCcccccCC
Q psy2060 48 RTLDLLHDMGARYHWGDTCETDIT 71 (193)
Q Consensus 48 ~~~~~~~C~C~~g~~G~~C~~~~~ 71 (193)
+..++|+|.|++||+|.+||..+.
T Consensus 29 d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 29 SNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCCEeEeCCCCCcCCCcCccCc
Confidence 456799999999999999998763
No 84
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.73 E-value=3.6e-06 Score=61.74 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=40.8
Q ss_pred ccCCCCceeeCCCCCC----CCcccccCCCCCCC---CCC--CCCcEEeeCCCC----ceecccCCCCCCccccccccc
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCETDITKSDCK---GVC--SPGATCSLNPSG----GYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~~~~~~~~C~---~pC--~~gg~C~~~~~~----~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.++.++|+|.|++||+ |..|+ +++.++|. .+| .++++|++.. + +|+|. |++||.. +..|+
T Consensus 18 ~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~-~~~~~~~~C~-C~~G~~~---~~~C~ 90 (162)
T 1uzk_A 18 VNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEI-GVGVSKASCC-CSLGKAW---GTPCE 90 (162)
T ss_dssp EEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEE-EEEECHHHHH-TTTCCEE---TTTTE
T ss_pred ECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCc-CCcccCceee-CCCCCCc---CCCcc
Confidence 6888999999999998 89998 44312387 345 4678999875 5 89999 9999874 55565
No 85
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.70 E-value=2.1e-05 Score=45.10 Aligned_cols=29 Identities=28% Similarity=0.309 Sum_probs=23.6
Q ss_pred eecCC--c--cCCCCceeeCCCCCCCCcccccC
Q psy2060 42 FVDGG--H--RTLDLLHDMGARYHWGDTCETDI 70 (193)
Q Consensus 42 ~~~gg--~--~~~~~~~C~C~~g~~G~~C~~~~ 70 (193)
+.||| . +..++|+|.|++||+|.+|+..+
T Consensus 11 C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 11 CLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 34566 3 67789999999999999999765
No 86
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.68 E-value=3.1e-05 Score=50.78 Aligned_cols=50 Identities=10% Similarity=-0.104 Sum_probs=37.0
Q ss_pred ccCCCCCCcee-cCCCCc----cCCCCcceeec-------CC--ccCCCCceeeCCCCCCCCcccccCC
Q psy2060 17 LTNGPFQPYLS-GLPDNE----GLEKRVQTFVD-------GG--HRTLDLLHDMGARYHWGDTCETDIT 71 (193)
Q Consensus 17 ~~~~~~~~~~c-C~~g~~----g~~~~c~~~~~-------gg--~~~~~~~~C~C~~g~~G~~C~~~~~ 71 (193)
+.|.+ +.|.| |++||+ |.. |+ ++| .+ .++.++|.|.|+ |+.|..|+.+..
T Consensus 18 C~n~~-g~y~C~C~~G~~~~~~g~~--C~-dideC~~~~C~~~C~n~~g~y~C~C~-g~~G~~~~~~~~ 81 (87)
T 1z6c_A 18 CKNIP-GDFECECPEGYRYNLKSKS--CE-DIDECSENMCAQLCVNYPGGYTCYCD-GKKGFKLAQDQK 81 (87)
T ss_dssp CCCBT-TBCCCSSSTTCEEETTTTE--EE-CCCHHHHSCCSSEECCCSSSCCEECC-SSSCCBCCTTSS
T ss_pred eECCC-CCEEEECCCCceECCCCCc--CC-CcCeeCCCCCCCEEEccCCCEEEECC-CCcCCcccCCCC
Confidence 34544 46889 999999 554 85 555 23 788999999998 888888876543
No 87
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.62 E-value=2.9e-05 Score=50.37 Aligned_cols=45 Identities=13% Similarity=-0.054 Sum_probs=33.3
Q ss_pred ccCCCCCCcee-cCCCCc--cCCCCcceeec---------CC--ccCCCCceeeCCCCCCCCc
Q psy2060 17 LTNGPFQPYLS-GLPDNE--GLEKRVQTFVD---------GG--HRTLDLLHDMGARYHWGDT 65 (193)
Q Consensus 17 ~~~~~~~~~~c-C~~g~~--g~~~~c~~~~~---------gg--~~~~~~~~C~C~~g~~G~~ 65 (193)
+.|.+ +.|.| |++||+ |.. |+ ++| .| .++.++|.|.|++||+|..
T Consensus 19 C~n~~-g~y~C~C~~Gy~~~g~~--C~-dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 19 CINTD-GSYRCECPFGYILAGNE--CV-DTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp ECCCS-SCCCEECCTTEEEETTE--EE-ECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred EEecC-CCEEEECCCCeECCCCc--cC-CcccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence 44554 46889 999998 654 74 444 23 7888999999999999753
No 88
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.61 E-value=5.7e-05 Score=44.85 Aligned_cols=29 Identities=28% Similarity=0.309 Sum_probs=24.1
Q ss_pred eecCC--c--cCCCCceeeCCCCCCCCcccccC
Q psy2060 42 FVDGG--H--RTLDLLHDMGARYHWGDTCETDI 70 (193)
Q Consensus 42 ~~~gg--~--~~~~~~~C~C~~g~~G~~C~~~~ 70 (193)
+.||| . +..++|.|.|++||+|.+|+..+
T Consensus 14 C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 14 CLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp SCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred CCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 44566 4 67889999999999999999765
No 89
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.60 E-value=2.5e-05 Score=51.09 Aligned_cols=41 Identities=20% Similarity=0.016 Sum_probs=30.9
Q ss_pred CCcee-cCCCCccC---CCCcceeec----------CC--ccCCCCceeeCCCCCCCC
Q psy2060 23 QPYLS-GLPDNEGL---EKRVQTFVD----------GG--HRTLDLLHDMGARYHWGD 64 (193)
Q Consensus 23 ~~~~c-C~~g~~g~---~~~c~~~~~----------gg--~~~~~~~~C~C~~g~~G~ 64 (193)
+.|.| |++||++. .+.|+ ++| ++ .++.++|.|.|++||++.
T Consensus 23 g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 23 GDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred CCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence 46889 99999832 22375 555 23 788899999999999874
No 90
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.59 E-value=2.2e-05 Score=65.93 Aligned_cols=74 Identities=16% Similarity=0.215 Sum_probs=21.7
Q ss_pred Ccee-cCCCCccCCCCcceeecCCc------------cCCCCceee-CCCCCCCCcccccCCCCCCCCCCCCCcEEeeCC
Q psy2060 24 PYLS-GLPDNEGLEKRVQTFVDGGH------------RTLDLLHDM-GARYHWGDTCETDITKSDCKGVCSPGATCSLNP 89 (193)
Q Consensus 24 ~~~c-C~~g~~g~~~~c~~~~~gg~------------~~~~~~~C~-C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~ 89 (193)
.+.| |+++++|.. ||.+..|=. .......|. |+-.+.|..|+... .||.|||+|.+..
T Consensus 312 ~~~C~C~~~ttG~~--CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t------~~C~ngg~C~~~~ 383 (426)
T 3zyj_B 312 KLTCECEHNTTGPD--CGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL------LHCQNGGTCHNNV 383 (426)
T ss_dssp EEEECCCTTEESSS--SCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------------
T ss_pred CceeeCCCCCcCCC--ccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc------ccCCCCCCcCCCC
Confidence 4678 999999998 998876320 112345564 55556666665332 6899999998542
Q ss_pred CCceecccCCCCCCcccccccccee
Q psy2060 90 SGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 90 ~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. |++||. |..|+..
T Consensus 384 ----~C~-C~~G~~----G~~Ce~c 399 (426)
T 3zyj_B 384 ----RCL-CPAAYT----GILCEKL 399 (426)
T ss_dssp -------------------------
T ss_pred ----CCc-CCCCCc----CCCCcCC
Confidence 898 999999 8889874
No 91
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.58 E-value=3.5e-05 Score=55.60 Aligned_cols=36 Identities=25% Similarity=0.656 Sum_probs=32.6
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++|. +||.++|+|++.. ++|.|. |++||. |..|+..
T Consensus 49 deC~~~pC~n~g~C~~~~-~~y~C~-C~~G~~----G~~C~~~ 85 (146)
T 1x7a_L 49 DQCEPNPCLNGGLCKDDI-NSYECW-CQVGFE----GKNCELD 85 (146)
T ss_dssp -CCSSCSSCTTCEEEECS-SCEEEE-CCSSEE----STTTCEE
T ss_pred CcCCCCCCCCCCEeECCC-CCEEEe-cCCCCc----CCcCCCC
Confidence 3999 9999999999998 999999 999998 8899875
No 92
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.57 E-value=1.6e-05 Score=48.26 Aligned_cols=33 Identities=21% Similarity=0.513 Sum_probs=27.5
Q ss_pred CCCCCcEEeeC---CCCceecccCCCCCCccccccccceec
Q psy2060 78 VCSPGATCSLN---PSGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 78 pC~~gg~C~~~---~~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
||.|||+|+.. ..+.|.|. |++||. |.+||...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~-C~~Gf~----G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCE-CAIGFM----GQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEE-ECTTEE----SSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeE-CCCCCc----cCCCcccC
Confidence 99999999832 23789999 999998 99998753
No 93
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.57 E-value=2.7e-05 Score=48.01 Aligned_cols=26 Identities=8% Similarity=-0.066 Sum_probs=22.4
Q ss_pred CCCCceeeCCCCCCCCcccccCCCCCCC
Q psy2060 49 TLDLLHDMGARYHWGDTCETDITKSDCK 76 (193)
Q Consensus 49 ~~~~~~C~C~~g~~G~~C~~~~~~~~C~ 76 (193)
..++|+|.|++||+|.+|+..++ .|.
T Consensus 28 ~~~~y~C~C~~Gf~G~~Ce~~i~--~~~ 53 (63)
T 1hae_A 28 NPSRYLCKCQPGFTGARCTENVP--MKV 53 (63)
T ss_dssp SSCCEEEECCTTEESTTSCEECC--SSC
T ss_pred CCCCEEEECCCCCcCCccCcCcC--ccc
Confidence 56799999999999999998876 554
No 94
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.56 E-value=2.8e-05 Score=43.04 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=21.9
Q ss_pred eecCC--ccCCCCceeeCCCCCCCCcccc
Q psy2060 42 FVDGG--HRTLDLLHDMGARYHWGDTCET 68 (193)
Q Consensus 42 ~~~gg--~~~~~~~~C~C~~g~~G~~C~~ 68 (193)
+.+|| .+..++|.|.|++||+|.+|+.
T Consensus 11 C~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 11 CLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred CCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 34455 5678899999999999999973
No 95
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.46 E-value=4e-05 Score=45.60 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=23.9
Q ss_pred eecCC--c--cCCCCceeeCCCCCCCCcccccC
Q psy2060 42 FVDGG--H--RTLDLLHDMGARYHWGDTCETDI 70 (193)
Q Consensus 42 ~~~gg--~--~~~~~~~C~C~~g~~G~~C~~~~ 70 (193)
+.||| . +..++|.|.|++||+|.+|+..+
T Consensus 14 C~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 14 CLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp ECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 55677 3 66778999999999999999764
No 96
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=97.39 E-value=5.5e-05 Score=65.89 Aligned_cols=36 Identities=25% Similarity=0.556 Sum_probs=32.6
Q ss_pred CCCC-CCCCCCcEEee-CCCCceecccCC-CCCCcccccccccee
Q psy2060 73 SDCK-GVCSPGATCSL-NPSGGYICDDCS-LAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~-~~~~~~~C~~C~-~g~~~~~~g~~C~~~ 114 (193)
++|. +||.|||+|++ .. ++|+|. |+ .||. |..||..
T Consensus 3 d~C~~~PC~ngG~C~~~~~-~~y~C~-C~~~G~~----G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGL-DRYQCD-CTRTGYS----GPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETT-TEEEEE-CTTSSEE----TTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCC-CceEee-CCCCCcC----CCCCCCC
Confidence 3899 99999999999 66 999999 99 9998 9999874
No 97
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.38 E-value=4.1e-05 Score=55.77 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=33.0
Q ss_pred CCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccceec
Q psy2060 74 DCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
+|. .||.++++|++.. ++|+|. |++||. |..||...
T Consensus 121 ~c~~~~C~~~g~C~~~~-~~~~c~-C~~g~~----G~~Ce~~~ 157 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETI-GNYTCS-CYPGFY----GPECEYVR 157 (162)
T ss_dssp CCCTTGGGGSEEEEECS-SSEEEE-ECTTEE----STTSCEEC
T ss_pred CCcCCCCCCCCEEecCC-CCceEe-CCCCCc----CcccccCc
Confidence 888 9999999999987 999999 999998 99998753
No 98
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=97.33 E-value=7.1e-05 Score=65.50 Aligned_cols=37 Identities=22% Similarity=0.492 Sum_probs=32.0
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCC-CCCCcccccccccee
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCS-LAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~-~g~~~~~~g~~C~~~ 114 (193)
++|. +||.|||+|++...++|.|. |+ +||. |..|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~-C~~~G~~----G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCD-CTRTGFY----GENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEE-CTTSSEE----TTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEe-cCCCCcc----CCCCCCc
Confidence 3899 99999999996433899999 99 9998 9999973
No 99
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.23 E-value=0.00017 Score=50.42 Aligned_cols=57 Identities=21% Similarity=0.266 Sum_probs=40.4
Q ss_pred eecCC--ccCC--CCc-eeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 42 FVDGG--HRTL--DLL-HDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 42 ~~~gg--~~~~--~~~-~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+.||| .+.. .+| +|.|++||+|.+|++.++ .+|..+ ....|++. +..++. |..|+.-
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-----~~C~~g------~G~~YrG~-~~~t~s----G~~Cq~W 64 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-----KTCYEG------NGHFYRGK-ASTDTM----GRPCLPW 64 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-----CCSBCS------SCTTCCSC-CCBBTT----SCBBCCT
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-----CCCccc------ccccceee-cccccc----CCcccCc
Confidence 45566 3432 456 999999999999998754 334432 23678999 988777 8899874
No 100
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.97 E-value=0.00016 Score=44.25 Aligned_cols=23 Identities=4% Similarity=-0.340 Sum_probs=20.4
Q ss_pred ccCCCCceeeCCCCCC-CCccccc
Q psy2060 47 HRTLDLLHDMGARYHW-GDTCETD 69 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~-G~~C~~~ 69 (193)
.+..++|+|.|++||+ |.+|+..
T Consensus 28 ~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 28 KETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp EECSSEEEEECCTTEEEEECSSSC
T ss_pred ccCCCceEeECCCCCccCCCCCCC
Confidence 6778899999999999 9999854
No 101
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.96 E-value=0.00046 Score=51.45 Aligned_cols=39 Identities=28% Similarity=0.663 Sum_probs=31.4
Q ss_pred CCcccccCCCCCCCCCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 63 GDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 63 G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
...|... .|..+|.|||.|+ +.-+|. ||.||. |..|+..
T Consensus 143 ~K~C~~~----~C~~~C~ngG~Cv----~P~~C~-C~~Gw~----G~~C~~~ 181 (188)
T 2ygo_A 143 FKTCQQA----ECPGGCRNGGFCN----ERRICE-CPDGFH----GPHCEGT 181 (188)
T ss_dssp EEEECCC----CCTTCCCTTCEEC----TTSCEE-CCTTCB----TTTTCBC
T ss_pred cccccCC----ccCCCCCCCCEeC----CCCccc-CcCCCC----CCCCcCC
Confidence 4456544 7778999999998 455899 999999 9999864
No 102
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.96 E-value=0.00031 Score=56.62 Aligned_cols=34 Identities=29% Similarity=0.618 Sum_probs=31.1
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
++|. +||.++++|++.. ++|+|. |++||. |..|+
T Consensus 6 ~~C~~~pC~~~g~C~~~~-~~~~C~-C~~g~~----g~~C~ 40 (317)
T 3h5c_B 6 SPCISQPCLHNGSCQDSI-WGYTCT-CSPGYE----GSNCE 40 (317)
T ss_dssp CCTTSCCCTTTCCCCCCS-SSCCCC-CSSSCC----SSSSC
T ss_pred CcCCCCCCCCCCEeECCC-CCeEEE-CCCCCc----CCccc
Confidence 4999 9999999999887 999999 999998 78887
No 103
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.89 E-value=0.00033 Score=40.26 Aligned_cols=20 Identities=15% Similarity=-0.135 Sum_probs=17.6
Q ss_pred CCCceeeCCCCCCCCccccc
Q psy2060 50 LDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 50 ~~~~~C~C~~g~~G~~C~~~ 69 (193)
.++|.|.|++||+|.+|+..
T Consensus 25 ~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 25 MSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp TTEEEEEECTTCSSTTSCCC
T ss_pred CCCEEEECCCCCccCCCCcc
Confidence 36799999999999999864
No 104
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.89 E-value=0.00038 Score=49.92 Aligned_cols=40 Identities=30% Similarity=0.878 Sum_probs=30.8
Q ss_pred ccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 68 TDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 68 ~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.+++ +|. +||.+ ++|++.+ ++|+|. |++||.+...+..|.
T Consensus 2 ~did--eC~~~pC~n-g~C~n~~-g~y~C~-C~~G~~g~~~~~~C~ 42 (147)
T 2w86_A 2 ADID--ECESSPCIN-GVCKNSP-GSFICE-CSSESTLDPTKTICI 42 (147)
T ss_dssp CCCC--GGGGCCSBT-SEEEEET-TEEEEE-CCTTEEECTTSSBEE
T ss_pred CcCc--cCcCCCCCC-CEeECCC-CCEEeE-CCCCcccCCCCCeec
Confidence 3444 999 99997 6999998 999999 999998543334443
No 105
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=96.83 E-value=0.00027 Score=50.96 Aligned_cols=35 Identities=26% Similarity=0.542 Sum_probs=32.3
Q ss_pred CCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 74 DCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. .||.+++.|.+.. ..|.|. |.++|. |..||+.
T Consensus 121 ~~~~~pc~~~g~C~~~~-~~~~c~-C~~g~~----g~~Ce~~ 156 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETI-NNYTCK-CDPGFS----GLKCEQI 156 (157)
T ss_dssp CCCTTGGGGSEEEEEET-TEEEEE-ECTTEE----STTSCEE
T ss_pred CCCCCCCCCCCEeecCC-CCeeEE-CCCCcc----Ccccccc
Confidence 788 9999999999988 999999 999998 9999874
No 106
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.70 E-value=0.00033 Score=58.01 Aligned_cols=45 Identities=9% Similarity=-0.062 Sum_probs=15.0
Q ss_pred CCCCcee-cCCCCc----cCCCCcceeec-----CC-----ccCCCCceeeCCCCCC----CCcccc
Q psy2060 21 PFQPYLS-GLPDNE----GLEKRVQTFVD-----GG-----HRTLDLLHDMGARYHW----GDTCET 68 (193)
Q Consensus 21 ~~~~~~c-C~~g~~----g~~~~c~~~~~-----gg-----~~~~~~~~C~C~~g~~----G~~C~~ 68 (193)
+.+.|.| |++||. |.. | .++| +. .++.++|.|.|++||. |..|+.
T Consensus 20 ~~g~~~C~C~~G~~l~~~~~~--C-~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 20 IRGAVQCTCHTGYRLTEDGRT--C-QDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp -----------------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEE
T ss_pred CCCCcEeECCCCceECCCCCc--c-CccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCeECC
Confidence 3456889 999998 665 8 4544 11 6888999999999998 778864
No 107
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=96.69 E-value=0.0013 Score=48.16 Aligned_cols=60 Identities=20% Similarity=0.285 Sum_probs=39.8
Q ss_pred Cceee-CCCCCCCCcccccCC-----------CCCCC-CCCCCCc------EEeeCCCCceecccCCCCCCccccccccc
Q psy2060 52 LLHDM-GARYHWGDTCETDIT-----------KSDCK-GVCSPGA------TCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 52 ~~~C~-C~~g~~G~~C~~~~~-----------~~~C~-~pC~~gg------~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
...|. |+++|+|.+|++-.. .+.|. -.|.+.+ +|.. ...+|. |++++. |+.|+
T Consensus 74 tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~---~tG~C~-C~~g~~----G~~Cd 145 (162)
T 1klo_A 74 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNP---VTGQCQ-CLPHVS----GRDCG 145 (162)
T ss_dssp TCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCT---TTCCCC-BCTTEE----STTCC
T ss_pred CCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCC---CCCEeE-CCCCCc----CCCCC
Confidence 56794 999999999975211 12454 4566554 5642 345799 999988 99998
Q ss_pred eecccCC
Q psy2060 113 LRARSFP 119 (193)
Q Consensus 113 ~~~~sF~ 119 (193)
+=.+.|.
T Consensus 146 ~C~~g~~ 152 (162)
T 1klo_A 146 TCDPGYY 152 (162)
T ss_dssp EECTTCB
T ss_pred CCCCCcc
Confidence 7544443
No 108
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.67 E-value=0.0014 Score=38.29 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=26.8
Q ss_pred CCCCCCcEEeeCC-CCceecccCCCCCCcccccccccee
Q psy2060 77 GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 77 ~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++|.|| +|.... .+.+.|. |+.||. |.+|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~-C~~gy~----G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACV-CHSGYV----GARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEE-CCCCCc----ccCCCce
Confidence 899997 998542 3788999 999999 9999864
No 109
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.62 E-value=0.0016 Score=38.11 Aligned_cols=31 Identities=26% Similarity=0.682 Sum_probs=24.6
Q ss_pred CCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 78 VCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 78 pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
+|. ..|++.. ++|+|. |++||.+...+..|.
T Consensus 21 ~C~--~~C~n~~-Gsy~C~-C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 21 QCQ--HLCHNYV-GGYFCS-CRPGYELQEDRHSCQ 51 (53)
T ss_dssp TTS--SEEEEET-TEEEEE-CSTTCEECTTSSCEE
T ss_pred CCC--CEeECCC-CCeEEE-CCCCCeECCCCCccC
Confidence 676 4999998 999999 999998654556663
No 110
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.52 E-value=0.0011 Score=46.13 Aligned_cols=32 Identities=25% Similarity=0.570 Sum_probs=26.4
Q ss_pred CCCCCcEEeeCC-CCce-ecccCCCCCCcccccccccee
Q psy2060 78 VCSPGATCSLNP-SGGY-ICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 78 pC~~gg~C~~~~-~~~~-~C~~C~~g~~~~~~g~~C~~~ 114 (193)
||.|||+|++.. ..+| +|. ||++|. |..|+..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~-Cp~g~~----G~~Ce~~ 35 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCN-CPKKFG----GQHCEID 35 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEE-CCTTEE----STTSCEE
T ss_pred CCCCcCCcCCCcccCCCCCcc-CCCCCC----Ccccccc
Confidence 899999998762 1455 999 999998 9999875
No 111
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=96.52 E-value=0.00044 Score=53.09 Aligned_cols=52 Identities=21% Similarity=0.379 Sum_probs=39.9
Q ss_pred ceeeCCCCCCCCcccccCCC-------CCCC-----CCCCCCcEEeeCCCCceecccCCCC------CCcccccccccee
Q psy2060 53 LHDMGARYHWGDTCETDITK-------SDCK-----GVCSPGATCSLNPSGGYICDDCSLA------GSYEHYDRLCRLR 114 (193)
Q Consensus 53 ~~C~C~~g~~G~~C~~~~~~-------~~C~-----~pC~~gg~C~~~~~~~~~C~~C~~g------~~~~~~g~~C~~~ 114 (193)
..|.|++||+|.+|+...+. ..|. .+|.++|+|+. + +|. |+++ |. |..|+..
T Consensus 107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~---g--~C~-C~~gw~~~~~~~----G~~Ce~~ 176 (217)
T 2p28_B 107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---G--QCL-CHTSDVPGKLIY----GQYCECD 176 (217)
T ss_dssp TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET---T--EEE-ECCCCSTTCCEE----STTSCEE
T ss_pred CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC---C--ceE-CCCCCCCcccEE----CCCcccC
Confidence 58999999999999865320 1354 58999999983 2 699 9998 45 8999853
No 112
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.44 E-value=0.00043 Score=41.80 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=26.8
Q ss_pred cCCCCccCCCCcceeecCC--c--c--CCCCceeeCCCCCCCCccccc
Q psy2060 28 GLPDNEGLEKRVQTFVDGG--H--R--TLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 28 C~~g~~g~~~~c~~~~~gg--~--~--~~~~~~C~C~~g~~G~~C~~~ 69 (193)
|++.+.+.. ++||| . + ..+.|.|.|++||+|.+||..
T Consensus 7 C~~~~~~~p-----C~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 7 CPETFDAWY-----CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp CCHHHHHHT-----SCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred CCccccCCc-----CCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 666665532 45677 2 2 445799999999999999865
No 113
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.41 E-value=0.0017 Score=56.17 Aligned_cols=39 Identities=23% Similarity=0.356 Sum_probs=26.0
Q ss_pred CCC-CCCCCCcEEeeCC---CCceecccCCCCCCccccccccceeccc
Q psy2060 74 DCK-GVCSPGATCSLNP---SGGYICDDCSLAGSYEHYDRLCRLRARS 117 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~---~~~~~C~~C~~g~~~~~~g~~C~~~~~s 117 (193)
.|. .+|.++++|.+.. ...++|. |+++|. |..|++-...
T Consensus 437 ~C~~C~C~~~gtc~~~~~Cd~~tg~C~-C~~g~~----G~~Ce~C~~G 479 (525)
T 4aqs_A 437 GCKSCACNPLGTIPGGNPCDSETGYCY-CKRLVT----GQRCDQCLPQ 479 (525)
T ss_dssp SSEECCCCTTTBCCSSCCBCTTTCCBC-BCTTCC----STTTCC----
T ss_pred CCccCCCCCCceecCCCcccCCCCEEE-CCCCCc----CCCcccCCCC
Confidence 576 7787777775431 2566899 999998 9999764333
No 114
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=96.33 E-value=0.0029 Score=36.90 Aligned_cols=31 Identities=19% Similarity=0.443 Sum_probs=25.2
Q ss_pred CCCCCCcEEeeCC-CCceecccCCCCCCccccccccce
Q psy2060 77 GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 77 ~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+.|.|| +|.-.. .+.+.|. |+.+|. |.+|+.
T Consensus 18 ~yC~nG-~C~~i~~~~~~~C~-C~~gy~----G~RCe~ 49 (50)
T 2rnl_A 18 NFCIHG-ECKYIEHLEAVTCK-CQQEYF----GERCGE 49 (50)
T ss_dssp GTCSSS-EEEEETTTTEEEEE-CCSSCC----SSSCCC
T ss_pred CcCCCC-EEEEecCCCCeeEE-CCCCcc----cccccc
Confidence 789985 998332 3788999 999999 999974
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.33 E-value=0.0019 Score=46.84 Aligned_cols=35 Identities=23% Similarity=0.597 Sum_probs=31.8
Q ss_pred CCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 74 DCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.|. .+|.++|+|++.. .+|.|. |++||. |..|+..
T Consensus 121 ~~~~~~C~~~g~C~~~~-~~~~c~-C~~g~~----g~~C~~~ 156 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEII-NNYTCN-CDVGYY----GPQCQFV 156 (164)
T ss_dssp CCCTTSSCSSEEEEEET-TEEEEE-ECTTCB----SSSSCBC
T ss_pred CCCCCcCCCCCeecccC-CCceee-eCCCcc----ccccccc
Confidence 788 9999999999987 999999 999998 8899864
No 116
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.29 E-value=0.0018 Score=38.44 Aligned_cols=37 Identities=19% Similarity=0.546 Sum_probs=29.3
Q ss_pred CCC---CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 74 DCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. .+|.+ .|++.+ ++|+|. |++||....++..|...
T Consensus 3 EC~~~~~~C~~--~C~nt~-Gsy~C~-C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 3 LCSLDNGDCDQ--FCHEEQ-NSVVCS-CARGYTLADNGKACIPT 42 (55)
T ss_dssp CTTTGGGGCSS--EEEEET-TEEEEE-CCTTEEECTTSSCEEES
T ss_pred cccCCCCCcCc--EeEcCC-CCeEEe-CCCCCEECCCCCeeccC
Confidence 676 56864 899998 999999 99999765567778653
No 117
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.26 E-value=0.0016 Score=37.99 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=26.6
Q ss_pred CCCCCCcEEeeCC-CCceecccCCCCCCccccccccceec
Q psy2060 77 GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRLRA 115 (193)
Q Consensus 77 ~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~~~ 115 (193)
+.|.| |+|.-.. .+.+.|. |+.+|+ |.+||...
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~-C~~gy~----G~RCe~~~ 47 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCV-CDEGYI----GARCERVD 47 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEEC-CCTTEE----TTTTCEEC
T ss_pred CcccC-CEEEeEcCCCCeEEE-CCCCcc----cCCCCeec
Confidence 89999 6896332 3778999 999999 99998754
No 118
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.09 E-value=0.00075 Score=57.55 Aligned_cols=48 Identities=19% Similarity=0.352 Sum_probs=38.9
Q ss_pred ceeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 53 LHDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 53 ~~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
..+.|+++|.|..|+.. .|..+|.| |+|++ .++|. |+++|. |..|+..
T Consensus 377 ~p~~C~~~~~g~~c~~~----~C~~~C~n-G~C~~----~~~C~-C~~G~~----G~~C~~~ 424 (463)
T 2wg3_C 377 MPEECRATVQPAQTLTS----ECSRLCRN-GYCTP----TGKCC-CSPGWE----GDFCRTA 424 (463)
T ss_dssp SCGGGCCCCCCCCCCCC----HHHHHCCS-EEECT----TSCEE-ECTTEE----STTSCEE
T ss_pred ccccCCCCCcCCCCccc----cccCCCCC-CccCC----CCeEC-CCCCcC----CCcCCcC
Confidence 45789999999999864 78856998 79974 34899 999998 8899753
No 119
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.07 E-value=0.0029 Score=42.95 Aligned_cols=48 Identities=25% Similarity=0.408 Sum_probs=34.6
Q ss_pred CCCCCCCCcccccCCCCCCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 57 GARYHWGDTCETDITKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 57 C~~g~~G~~C~~~~~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
...+|+|..|.. + +|. .+|. .+|++.. ++|.|. |++||.+. .+..|+.
T Consensus 18 ~~~~~~~~~Cd~--n--eC~~~~~~C~--~~C~n~~-g~y~C~-C~~Gy~g~-~g~~C~d 68 (107)
T 2w2n_E 18 TENLYFQGAMGT--N--ECLDNNGGCS--YVCNDLK-IGYECL-CPDGFQLV-AQRRCED 68 (107)
T ss_dssp --CCCCSCCBSC--C--GGGTGGGGCS--SEEECCS-BSCEEE-CCTTCEEE-TTTEEEC
T ss_pred cCCCcCCCCCcC--c--cCcCCCCCCC--CEeEeCC-CCeEEE-CCCCcccc-CCCcccc
Confidence 446788999953 3 887 3665 5999988 999999 99999831 1377864
No 120
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=96.06 E-value=0.0018 Score=41.45 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=25.5
Q ss_pred CCCCCCcEEeeCC-CCceecccCCCCCCcccccccccee
Q psy2060 77 GVCSPGATCSLNP-SGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 77 ~pC~~gg~C~~~~-~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++|.|| +|.... .+.+.|. |+++|. |.+|+..
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~-C~~GYt----G~RCE~l 78 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCI-CHPGYH----GERCHGL 78 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEE-ECTTEE----STTCCEE
T ss_pred CcCCCC-EeeeecCCCCeEEE-cCCCcc----ccccccc
Confidence 899997 995332 2678999 999999 9999863
No 121
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.01 E-value=0.0034 Score=36.57 Aligned_cols=21 Identities=19% Similarity=0.064 Sum_probs=17.9
Q ss_pred CCCCceeeCCCCCCCCccccc
Q psy2060 49 TLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 49 ~~~~~~C~C~~g~~G~~C~~~ 69 (193)
..+.+.|.|++||+|..|+..
T Consensus 26 ~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 26 QEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CCCCeEEECCCCCcccCCCce
Confidence 346789999999999999854
No 122
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.97 E-value=0.0015 Score=51.88 Aligned_cols=37 Identities=27% Similarity=0.568 Sum_probs=31.9
Q ss_pred CCCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 73 SDCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 73 ~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
++|. ++|..++.|++.. ++|.|. |++||.++ |..|..
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~-Gsy~C~-C~~Gy~Gn--G~~C~d 45 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYA-TGFCCR-CVANYTGN--GRQCVA 45 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECS-SCEEEE-ECTTEEEC--SSSEEE
T ss_pred hhccCCCCCCCCCCEeEcCC-CCeEEE-cCCCCCCC--CCcCCC
Confidence 4897 7999999999998 999999 99999865 778864
No 123
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.85 E-value=0.0024 Score=46.77 Aligned_cols=49 Identities=22% Similarity=0.504 Sum_probs=38.2
Q ss_pred CCCCCCcccccCCCCCCC-CC-----CCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 59 RYHWGDTCETDITKSDCK-GV-----CSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 59 ~g~~G~~C~~~~~~~~C~-~p-----C~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+||.+..+..+++ +|. .+ |.+ .|++.. ++|.|. |++||....++..|+.
T Consensus 113 ~Gf~~~~~~~di~--eC~~~~~~~~~C~~--~C~n~~-g~~~C~-C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAFYAAEDID--ECQVAPGEAPTCDH--HCHNHL-GGFYCS-CRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEEEEEEECC--TTCCCTTSCCSSSS--EEEEET-TEEEEE-CCTTEEECTTSSCEEE
T ss_pred cCceeeeeccccC--cccCCCCCCCccCC--ccccCC-CCEEEe-CCCCcEECCCCCcccc
Confidence 6777777776665 898 43 876 799988 999999 9999986555777754
No 124
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.82 E-value=0.0026 Score=37.08 Aligned_cols=22 Identities=14% Similarity=-0.005 Sum_probs=18.7
Q ss_pred cCCCCceeeCCCCCCCCccccc
Q psy2060 48 RTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 48 ~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
...+.+.|.|++||+|..||..
T Consensus 25 ~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 25 VAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTTTEEEECCCTTEETTTTCEE
T ss_pred cCCCCeEEECCCCcccCCCCee
Confidence 4456789999999999999965
No 125
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.77 E-value=0.0045 Score=44.42 Aligned_cols=32 Identities=25% Similarity=0.570 Sum_probs=26.4
Q ss_pred CCCCCcEEeeCC-CCce-ecccCCCCCCcccccccccee
Q psy2060 78 VCSPGATCSLNP-SGGY-ICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 78 pC~~gg~C~~~~-~~~~-~C~~C~~g~~~~~~g~~C~~~ 114 (193)
||.|||+|+... ...+ +|. ||.+|. |+.|+..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~-Cp~g~~----G~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCN-CPKKFG----GQHCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEE-CCTTEE----STTSCEE
T ss_pred CCCCCCCcCCCccccCCcccc-CCCCCC----CCceecc
Confidence 999999998651 2556 899 999998 9999875
No 126
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.75 E-value=0.0083 Score=43.02 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=38.4
Q ss_pred eeecCC--ccC--CCCc-eeeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 41 TFVDGG--HRT--LDLL-HDMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 41 ~~~~gg--~~~--~~~~-~C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.++||| ... ...+ +|.|++||+|.+|++..+ .. |.......|+.. ...... |..|+.-
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~-----~~------C~~g~G~~YrG~-~s~T~s----G~~Cq~W 76 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-----KT------CYEGNGHFYRGK-ASTDTM----GRPCLPW 76 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS-----CC------EECTTCTTCCSC-CCBBTT----SCBCCCT
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecccc-----cc------CCCCCccccccc-eecCCc----CCcccCC
Confidence 466777 232 3456 899999999999998754 22 333223667777 665555 8888763
No 127
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.71 E-value=0.0026 Score=46.01 Aligned_cols=23 Identities=17% Similarity=0.104 Sum_probs=21.0
Q ss_pred ccCCCCceeeCCCCCCCCccccc
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
.+..++|.|.|++||+|.+||..
T Consensus 134 ~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 134 LETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp EECSSSEEEEECTTEESTTSCEE
T ss_pred ecCCCCceEeCCCCCcCcccccC
Confidence 67788999999999999999976
No 128
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.20 E-value=0.011 Score=36.84 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=29.6
Q ss_pred CCC---CCCCCCcEEeeCCCC-ceecccCCCCCCcccccccccee
Q psy2060 74 DCK---GVCSPGATCSLNPSG-GYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 74 ~C~---~pC~~gg~C~~~~~~-~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+|. ..|.+ .|++.+ + +|.|. |+.||....++..|...
T Consensus 7 eC~~~nggC~h--~C~n~~-g~s~~C~-C~~Gy~L~~D~~tC~d~ 47 (69)
T 1kli_L 7 ICVNENGGCEQ--YCSDHT-GTKRSCR-CHEGYSLLADGVSCTPT 47 (69)
T ss_dssp CTTSGGGGCSS--EEEEET-TTEEEEE-CCTTEEECTTSSCEEEC
T ss_pred cccCCCCCcCC--EeEcCC-CCCEEEe-CCCCCeECCCCCcccCc
Confidence 786 46765 799987 7 89999 99999876678888654
No 129
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=95.15 E-value=0.022 Score=33.07 Aligned_cols=21 Identities=14% Similarity=0.322 Sum_probs=17.8
Q ss_pred cCCCCceeeCCCCCCCCcccc
Q psy2060 48 RTLDLLHDMGARYHWGDTCET 68 (193)
Q Consensus 48 ~~~~~~~C~C~~g~~G~~C~~ 68 (193)
...+.+.|.|++||+|..|+.
T Consensus 29 ~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 29 EHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp TTTTEEEEECCSSCCSSSCCC
T ss_pred cCCCCeeEECCCCcccccccc
Confidence 445678999999999999984
No 130
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.56 E-value=0.011 Score=34.43 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=26.0
Q ss_pred CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 77 GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 77 ~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.+|.+ .|++.+ ++|+|. |++||....++..|+..
T Consensus 6 g~C~~--~C~n~~-gs~~C~-C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 6 GGCDQ--FCREER-SEVRCS-CAHGYVLGDDSKSCVST 39 (51)
T ss_dssp TSSSS--CCCEET-TEECCC-CCTTEEECTTSSCEEEC
T ss_pred CCcCC--EeEcCC-CCeEEe-CCCCcEECCCCCccccC
Confidence 34544 588887 999999 99999866667888653
No 131
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.50 E-value=0.015 Score=48.27 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=29.4
Q ss_pred CCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 74 DCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 74 ~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+|. .+|..++.|++.+ ++|.|. |++||.+ ..|..|+.
T Consensus 2 eC~~~~~~c~~~C~~~~-~~y~C~-C~~G~~~-~~~~~C~d 39 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLK-IGYECL-CPDGFQL-VAQRRCED 39 (400)
T ss_dssp CTTTTGGGCSSEEEECS-SSEEEE-CCTTEEE-CSSSCEEE
T ss_pred cccCCCCCCCCEeECCC-CCeEEE-CCCCCCc-CCCCcccC
Confidence 788 7888888999998 999999 9999974 23555643
No 132
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.36 E-value=0.044 Score=34.17 Aligned_cols=30 Identities=30% Similarity=0.557 Sum_probs=23.9
Q ss_pred CCC---CCCCCCcEEeeCCCCceecccCCCCCCc
Q psy2060 74 DCK---GVCSPGATCSLNPSGGYICDDCSLAGSY 104 (193)
Q Consensus 74 ~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~ 104 (193)
+|. ++|.++++|++.. ++|+|..|+.+|..
T Consensus 5 EC~~~~~~C~~~~~C~Nt~-Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 5 ECLTIPEACKGEMKCINHY-GGYLCLPRSAAVIN 37 (71)
T ss_dssp CTTCCCCSCTTEEEEEETT-CCEEEEETTSCCCS
T ss_pred cccCCCCCCCCCCEeECCC-CCeEecccCCcccc
Confidence 887 6899999999998 99999834445553
No 133
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=93.57 E-value=0.02 Score=33.79 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=17.6
Q ss_pred ccCCCCceeeCCCCCC----CCccc
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCE 67 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~ 67 (193)
.|++++|.|.|++||. |..|.
T Consensus 16 ~nt~Gsy~C~C~~Gy~L~~d~~~C~ 40 (55)
T 2jkh_L 16 HEEQNSVVCSCARGYTLADNGKACI 40 (55)
T ss_dssp EEETTEEEEECCTTEEECTTSSCEE
T ss_pred EcCCCCeEEeCCCCCEECCCCCeec
Confidence 5888999999999996 55665
No 134
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.46 E-value=0.021 Score=49.66 Aligned_cols=30 Identities=20% Similarity=0.109 Sum_probs=24.7
Q ss_pred eeecCC--cc-CCCCceeeCC-CCCCCCcccccC
Q psy2060 41 TFVDGG--HR-TLDLLHDMGA-RYHWGDTCETDI 70 (193)
Q Consensus 41 ~~~~gg--~~-~~~~~~C~C~-~g~~G~~C~~~~ 70 (193)
.|.||| .+ ..++|.|.|+ +||+|.+||...
T Consensus 9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp CCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence 355677 56 7789999999 999999999864
No 135
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=92.89 E-value=0.046 Score=31.96 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=25.9
Q ss_pred CCCCCcEEeeCCCC-ceecccCCCCCCcccccccccee
Q psy2060 78 VCSPGATCSLNPSG-GYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 78 pC~~gg~C~~~~~~-~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.|.+ .|++.. + +|+|. |++||....++..|...
T Consensus 8 gC~~--~C~n~~-ggs~~C~-C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 8 GCEQ--YCSDHT-GTKRSCR-CHEGYSLLADGVSCTPT 41 (53)
T ss_dssp GCSS--EEEEET-TTEEEEE-CCTTEEECTTSSCEEEC
T ss_pred CcCC--EeEcCC-CCCEEee-CCCCCEECCCCCcccCC
Confidence 4544 699887 7 79999 99999876678888653
No 136
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=92.88 E-value=0.079 Score=31.72 Aligned_cols=22 Identities=9% Similarity=0.062 Sum_probs=17.4
Q ss_pred ccCC-CCceeeCCCCCC----CCcccc
Q psy2060 47 HRTL-DLLHDMGARYHW----GDTCET 68 (193)
Q Consensus 47 ~~~~-~~~~C~C~~g~~----G~~C~~ 68 (193)
.+++ ++|.|.|++||. |..|..
T Consensus 14 ~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 14 KNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp EECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred EeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 4777 599999999996 567764
No 137
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=92.83 E-value=0.056 Score=40.21 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=19.9
Q ss_pred eecCCccCCCCceeeCCCCCCCCccccc
Q psy2060 42 FVDGGHRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 42 ~~~gg~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
|.|||.- .+...|.|++||+|.+|+..
T Consensus 155 C~ngG~C-v~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 155 CRNGGFC-NERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCTTCEE-CTTSCEECCTTCBTTTTCBC
T ss_pred CCCCCEe-CCCCcccCcCCCCCCCCcCC
Confidence 4456621 23569999999999999875
No 138
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=92.58 E-value=0.037 Score=32.02 Aligned_cols=17 Identities=6% Similarity=-0.412 Sum_probs=15.1
Q ss_pred ccCCCCceeeCCCCCCC
Q psy2060 47 HRTLDLLHDMGARYHWG 63 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G 63 (193)
.|+.++|.|.|++||++
T Consensus 27 ~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 27 HNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp EEETTEEEEECSTTCEE
T ss_pred ECCCCCeEEECCCCCeE
Confidence 58889999999999984
No 139
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.49 E-value=0.049 Score=38.98 Aligned_cols=48 Identities=27% Similarity=0.454 Sum_probs=33.9
Q ss_pred CCCCCCcccccCCCCCCC----CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 59 RYHWGDTCETDITKSDCK----GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 59 ~g~~G~~C~~~~~~~~C~----~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.||.......+++ +|. .+|. ..|++.. ++|.|. |++||.....+..|+
T Consensus 106 ~GF~~~y~~~d~~--eC~~~~~~~C~--~~C~n~~-g~~~C~-C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 106 TGFAAYYVATDIN--ECTDFVDVPCS--HFCNNFI-GGYFCS-CPPEYFLHDDMKNCG 157 (159)
T ss_dssp CEEEEEEEEEECC--TTTC-CCCCSS--SEEEEET-TEEEEE-CCTTCEECTTSSCEE
T ss_pred ccceeeeecccCc--ccCCCCCCCCC--CcccCcC-CCEEEe-cCCCcEECCCCCccc
Confidence 4555445444544 887 2564 4899987 999999 999998655577775
No 140
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=92.32 E-value=0.031 Score=35.64 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=17.1
Q ss_pred CCCceeeCCCCCCCCccccc
Q psy2060 50 LDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 50 ~~~~~C~C~~g~~G~~C~~~ 69 (193)
.+.+.|.|++||+|..|+..
T Consensus 59 ~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 59 LRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp GTBCCEEECTTEESTTCCEE
T ss_pred CCCeEEEcCCCccccccccc
Confidence 35789999999999999853
No 141
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=92.08 E-value=0.043 Score=45.41 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=13.5
Q ss_pred cCCCCceeeCCCCCCCCccccc
Q psy2060 48 RTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 48 ~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
+..+++.|.|+++|+|.+|+.-
T Consensus 267 ~~~~~~~C~C~~nt~G~~Ce~C 288 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTYGVDCEKC 288 (375)
T ss_dssp CTTSCEEECCCTTEESTTSCEE
T ss_pred CCCCCeeeeCcCCCcCCCcccC
Confidence 3344566677777777766653
No 142
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.97 E-value=1 Score=36.17 Aligned_cols=36 Identities=28% Similarity=0.720 Sum_probs=23.8
Q ss_pred CCC--CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 74 DCK--GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 74 ~C~--~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+|. ..|.+ .|++.+ ++|+|. |++||....++..|..
T Consensus 3 ec~~~~~C~~--~C~n~~-g~~~C~-C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 3 ECAEEGYCSQ--GCTNSE-GAFQCW-CEAGYELRPDRRSCKA 40 (349)
T ss_dssp ------CCSS--EECCC----CCEE-CCTTEEECTTSSCEEE
T ss_pred ccCCCCCCcC--eeecCC-CCeEEE-CCCCccCCCCCCcccc
Confidence 665 66776 899988 999999 9999986666788864
No 143
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=91.90 E-value=0.16 Score=33.75 Aligned_cols=53 Identities=23% Similarity=0.406 Sum_probs=40.5
Q ss_pred CCCCceeeCCCCCC--CCcccccCCCCCCC---CCCCCCcEEeeCCC----CceecccCCCCCC
Q psy2060 49 TLDLLHDMGARYHW--GDTCETDITKSDCK---GVCSPGATCSLNPS----GGYICDDCSLAGS 103 (193)
Q Consensus 49 ~~~~~~C~C~~g~~--G~~C~~~~~~~~C~---~pC~~gg~C~~~~~----~~~~C~~C~~g~~ 103 (193)
..+...|+|.+||. |..|....+ .+|. .-|...+.|..... +...|. |.+++.
T Consensus 22 ~~g~e~C~C~~gy~gdg~~Cv~~~~-~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~-C~~g~~ 83 (99)
T 1ob1_C 22 LDEREECKCLLNYKQEGDKCVENPN-PTCNENNGGCDADAKCTEEDSGSNGKKITCE-CTKPDS 83 (99)
T ss_dssp TTSCCEEEECTTEEEETTEEEECSC-CCSTTGGGGCCTTEEEECCSCSSSSCCCEEE-ECSTTC
T ss_pred CCCCEEEEecCCeecCCCeEeeCCC-CChhhcCCCcCCCceeEecCCcccCCceEeE-eCCCCc
Confidence 56789999999998 556776532 3887 56999999987642 568899 988865
No 144
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=91.69 E-value=0.041 Score=48.11 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=22.7
Q ss_pred eeecCC--c-cCCCCceeeCC-CCCCCCccccc
Q psy2060 41 TFVDGG--H-RTLDLLHDMGA-RYHWGDTCETD 69 (193)
Q Consensus 41 ~~~~gg--~-~~~~~~~C~C~-~g~~G~~C~~~ 69 (193)
.|.||| . ...++|.|.|+ +||+|.+|+..
T Consensus 8 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 355666 3 34478999999 99999999975
No 145
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=91.60 E-value=0.033 Score=39.69 Aligned_cols=23 Identities=17% Similarity=0.023 Sum_probs=20.1
Q ss_pred ccCCCCceeeCCCCCCCCccccc
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
.+....|.|.|.+||+|.+||..
T Consensus 134 ~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 134 VETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EEETTEEEEEECTTEESTTSCEE
T ss_pred ecCCCCeeEECCCCccCcccccc
Confidence 45677899999999999999875
No 146
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=91.47 E-value=0.11 Score=31.12 Aligned_cols=34 Identities=15% Similarity=0.461 Sum_probs=25.9
Q ss_pred CCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 78 VCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 78 pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.|.+ .|++.+.++|.|. |++||....++..|...
T Consensus 8 gC~~--~C~n~~~gs~~C~-C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 8 RCEQ--FCKNSADNKVVCS-CTEGYRLAENQKSCEPA 41 (59)
T ss_dssp GCSS--EEEECSTTCEEEE-CCTTEEECTTSSCEEES
T ss_pred CcCC--EeEeCCCCCEEee-CCCCcEECCCCCcccCC
Confidence 4544 6888762499999 99999876678888653
No 147
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=91.22 E-value=0.099 Score=43.89 Aligned_cols=58 Identities=14% Similarity=0.138 Sum_probs=31.4
Q ss_pred CCCceeeCCCCCCCCcccccCCCCCCC-CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 50 LDLLHDMGARYHWGDTCETDITKSDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 50 ~~~~~C~C~~g~~G~~C~~~~~~~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.+.+.|.|+.+++|.+|+.-.. ... .|+.+|..|.........|..|+-++. |..|+.
T Consensus 310 ~g~~~C~C~~~ttG~~CE~C~p--gy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~----g~~CD~ 368 (426)
T 3zyj_B 310 NSKLTCECEHNTTGPDCGKCKK--NYQGRPWSPGSYLPIPKGAANACIPSISSIG----TNVCDN 368 (426)
T ss_dssp TTEEEECCCTTEESSSSCEECT--TCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------
T ss_pred CCCceeeCCCCCcCCCcccccc--ccccCcccCCcccccCCCCCCcccCCCCCCC----cCcccc
Confidence 3568999999999999996543 444 788776543211124455654544443 566654
No 148
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.04 E-value=0.065 Score=38.47 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=19.9
Q ss_pred ccCCCCceeeCCCCCCCCccccc
Q psy2060 47 HRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
.+..++|.|.|++||.|..|+..
T Consensus 134 ~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 134 VEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp EEETTEEEEEECTTCBSSSSCBC
T ss_pred cccCCCceeeeCCCccccccccc
Confidence 45577899999999999999865
No 149
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=89.99 E-value=0.087 Score=32.63 Aligned_cols=22 Identities=9% Similarity=-0.097 Sum_probs=17.2
Q ss_pred ccCCC-CceeeCCCCCC----CCcccc
Q psy2060 47 HRTLD-LLHDMGARYHW----GDTCET 68 (193)
Q Consensus 47 ~~~~~-~~~C~C~~g~~----G~~C~~ 68 (193)
.++.+ +|+|.|++||. |..|..
T Consensus 20 ~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 20 SDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp EEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred EcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 57777 79999999996 566653
No 150
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=89.66 E-value=0.16 Score=36.71 Aligned_cols=37 Identities=22% Similarity=0.707 Sum_probs=29.0
Q ss_pred CCCCCcEEeeCC-CCceec-ccCCCCCCccccccccceecccCC
Q psy2060 78 VCSPGATCSLNP-SGGYIC-DDCSLAGSYEHYDRLCRLRARSFP 119 (193)
Q Consensus 78 pC~~gg~C~~~~-~~~~~C-~~C~~g~~~~~~g~~C~~~~~sF~ 119 (193)
||.++++|.... .+.++| . |+++++ |.+|+.=...|.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~-C~~g~~----G~~Ce~C~~g~~ 40 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTH-CPTGTA----GKRCELCDDGYF 40 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECS-CCTTEE----STTSCEECTTEE
T ss_pred cCcCcCcccccCCCCCEEeCC-CCCCCc----CCCCcCCCCCCc
Confidence 789999998765 267899 7 999998 999987444443
No 151
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.34 E-value=0.27 Score=43.76 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=20.6
Q ss_pred cEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 83 ATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 83 g~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
..|++.. ++|.|. |++||.+ ..|..|+
T Consensus 306 ~~C~~~~-~~~~C~-C~~G~~~-~~~~~C~ 332 (699)
T 1n7d_A 306 HVCNDLK-IGYECL-CPDGFQL-VAQRRCE 332 (699)
T ss_dssp TTCCCCT-TCCCCC-CCSSSCC-CSSSCCC
T ss_pred CCcccCC-CCcEEe-CCCCeEc-CCCCccc
Confidence 4788887 999999 9999974 2345554
No 152
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.96 E-value=0.27 Score=44.54 Aligned_cols=36 Identities=25% Similarity=0.504 Sum_probs=25.6
Q ss_pred CCC-CCCCCCc-----EEeeCCCCceecccCCCCCCccccccccc
Q psy2060 74 DCK-GVCSPGA-----TCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 74 ~C~-~pC~~gg-----~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.|. ++|.++. .|++.+ ++|.|. |++||.. ..|..|+
T Consensus 309 ~C~~~~C~~~~~~C~~~C~~~~-~~y~C~-C~~Gy~l-~~g~~C~ 350 (791)
T 3m0c_C 309 ECGTNECLDNNGGCSHVCNDLK-IGYECL-CPDGFQL-VAQRRCE 350 (791)
T ss_dssp TBSCCSTTTGGGGCSSEEEECS-BSEEEE-CCTTCEE-ETTTEEE
T ss_pred ccccccccccccCccccccCCC-CCcccC-CCCCCcc-CCCCccc
Confidence 355 5665443 899998 999999 9999953 2255665
No 153
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=87.67 E-value=0.077 Score=47.28 Aligned_cols=46 Identities=17% Similarity=0.220 Sum_probs=33.1
Q ss_pred eeCCCCCCCCcccccCCCCCCCCCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 55 DMGARYHWGDTCETDITKSDCKGVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 55 C~C~~g~~G~~C~~~~~~~~C~~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
..|.++|+|.+|.... .|...|.+.|.|+.. +|. |.+||. |..|+.
T Consensus 520 ~~C~~gw~g~dc~i~~---~Cp~~C~ghG~C~~G-----~C~-Cd~G~~----G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGD---GCLDMCSGHGRCVQG-----SCV-CDEQWG----GLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEEES---CSSGGGGGSEEEETT-----EEE-ECTTEE----STTSCE
T ss_pred CccCCCcccccccccC---CCCcccCCCcEECCC-----CEe-eCCCcc----CCCcCc
Confidence 3678888888887431 677778888888743 577 878877 777765
No 154
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=87.34 E-value=0.37 Score=31.95 Aligned_cols=53 Identities=9% Similarity=-0.030 Sum_probs=35.4
Q ss_pred eccCCCCCCcee-cCCCCccCCCCcceee-------cCC--------ccCC----CCceeeCCCCCC-----CCcccc
Q psy2060 16 DLTNGPFQPYLS-GLPDNEGLEKRVQTFV-------DGG--------HRTL----DLLHDMGARYHW-----GDTCET 68 (193)
Q Consensus 16 ~~~~~~~~~~~c-C~~g~~g~~~~c~~~~-------~gg--------~~~~----~~~~C~C~~g~~-----G~~C~~ 68 (193)
.+.+.-.+..+| |.+||.|....|..+. ||| ...+ +...|.|.+||+ |..|.+
T Consensus 17 ~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~~~ 94 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFCSH 94 (99)
T ss_dssp EEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTEECC
T ss_pred CeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEEecc
Confidence 445555567778 9999988764566542 255 2222 579999999975 777754
No 155
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=87.34 E-value=0.87 Score=30.39 Aligned_cols=52 Identities=23% Similarity=0.414 Sum_probs=39.8
Q ss_pred cCCCCceeeCCCCCC--CCcccccCCCCC-CC---CCCCCCcEEeeCCCCceecccCCCCCC
Q psy2060 48 RTLDLLHDMGARYHW--GDTCETDITKSD-CK---GVCSPGATCSLNPSGGYICDDCSLAGS 103 (193)
Q Consensus 48 ~~~~~~~C~C~~g~~--G~~C~~~~~~~~-C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~ 103 (193)
..++...|+|..||. |..|-.. + + |. .-|...+.|.....+...|. |..+|.
T Consensus 27 ~~~G~e~CrCl~gY~~dg~~Cv~~-N--p~C~~nNGGCd~nAeC~~~~~~ki~C~-C~~~~~ 84 (105)
T 1n1i_A 27 YLDGTEEWRCLLGFKEVGGKCVPA-S--ITCEENNGGCAPEAECTMDDKKEVECK-CTKEGS 84 (105)
T ss_dssp CTTSCEEEEECTTEEECSSSEEEC-C--CCTTSGGGGSCTTSEEEECTTSCEEEE-CCSTTC
T ss_pred CCCCCEeEEEECCeeccCCEEEEC-C--cchhhcCCCcCCCcEeEECCCCEEEeE-CCCCCC
Confidence 366788999999998 5677665 3 5 76 56888899997732678899 988754
No 156
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=83.98 E-value=0.42 Score=37.87 Aligned_cols=54 Identities=20% Similarity=0.397 Sum_probs=34.8
Q ss_pred eeeCCCCCCCCcccccCCC-------CCCC-----CCCCCCcEEeeCCCCceecccCCCCCCcc--ccccccce
Q psy2060 54 HDMGARYHWGDTCETDITK-------SDCK-----GVCSPGATCSLNPSGGYICDDCSLAGSYE--HYDRLCRL 113 (193)
Q Consensus 54 ~C~C~~g~~G~~C~~~~~~-------~~C~-----~pC~~gg~C~~~~~~~~~C~~C~~g~~~~--~~g~~C~~ 113 (193)
.|.|.+||+|..|+-..+. ..|. ..|.+.|.|+-. +|. |......+ ..|++|+.
T Consensus 208 ~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG-----~C~-C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 208 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCL-CHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT-----EEE-ECCCSSTTCEEESTTSCE
T ss_pred ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC-----eeE-CcCCCCCCeeEeeEeccc
Confidence 5889999999999854321 1575 258888888732 577 85543221 23777764
No 157
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=82.13 E-value=0.38 Score=38.11 Aligned_cols=22 Identities=9% Similarity=-0.065 Sum_probs=19.1
Q ss_pred ccCCCCceeeCCCCCC--CCcccc
Q psy2060 47 HRTLDLLHDMGARYHW--GDTCET 68 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~--G~~C~~ 68 (193)
.|+.++|.|.|++||. |..|..
T Consensus 22 ~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 22 RDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp EECSSCEEEEECTTEEECSSSEEE
T ss_pred EcCCCCeEEEcCCCCCCCCCcCCC
Confidence 6899999999999998 677863
No 158
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=78.05 E-value=1.3 Score=36.59 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=17.1
Q ss_pred CCCcee-cCCCCccCCCCcceeecC
Q psy2060 22 FQPYLS-GLPDNEGLEKRVQTFVDG 45 (193)
Q Consensus 22 ~~~~~c-C~~g~~g~~~~c~~~~~g 45 (193)
...+.| |.++|+|.. |+.+.+|
T Consensus 269 ~~~~~C~C~~nt~G~~--Ce~C~~g 291 (375)
T 4aqt_A 269 FDKLMCNCKHNTYGVD--CEKCLPF 291 (375)
T ss_dssp TSCEEECCCTTEESTT--SCEECTT
T ss_pred CCCeeeeCcCCCcCCC--cccCCCC
Confidence 345668 999999997 9888753
No 159
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=76.97 E-value=1.1 Score=41.30 Aligned_cols=36 Identities=17% Similarity=0.462 Sum_probs=30.7
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
+.|. .||.|+++++... ....|. |++++. |..|+..
T Consensus 498 ~~c~C~PC~ngg~~~l~g-~~C~C~-C~~g~~----G~~Ce~~ 534 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSG-TECLCV-CQSGTY----GENCEKQ 534 (913)
T ss_dssp CGGGSCCBTTTBEEEEET-TEEEEE-CCTTBC----STTSCCB
T ss_pred ccccCCCCCCCCEeecCC-CceEEE-ccCCcc----ccCccCc
Confidence 4788 9999999999765 888999 999887 8888774
No 160
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=76.85 E-value=1.4 Score=38.07 Aligned_cols=34 Identities=26% Similarity=0.552 Sum_probs=28.6
Q ss_pred CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 77 GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 77 ~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+||..++.|+....+.|.|. |+.||++. |..|..
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~-C~~G~ag~--G~~c~~ 60 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCV-CAVGWAGN--GILCGR 60 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEE-ECTTEESS--SSSCEE
T ss_pred CCCCCCCeeEeCCCCCEecC-CCCCCCCC--CcccCc
Confidence 69999999998765778999 99999865 777765
No 161
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=76.72 E-value=1.8 Score=34.14 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=21.4
Q ss_pred EEeeCC-----CCceecccCCCCCCccccccccc
Q psy2060 84 TCSLNP-----SGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 84 ~C~~~~-----~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.|.+.+ .++|+|. ||.|+....++..|.
T Consensus 283 ~C~~~p~~~~~~~~~~C~-C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 283 LCLPAPQINPHSPKFTCA-CPDGMLLARDMRSCL 315 (316)
T ss_dssp EEEECCCCSTTCCSEEEE-CCTTCEECTTSSCEE
T ss_pred ccCCCccccCCCCCeEee-CCCCCEECCCCCccC
Confidence 787664 2589999 999998766677774
No 162
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=75.79 E-value=2.2 Score=35.43 Aligned_cols=64 Identities=23% Similarity=0.509 Sum_probs=39.3
Q ss_pred ceeeCCCCCCCCcccccCC--------------CCCCC-CCCCCCc-EEeeCC---------------CCceecccCCCC
Q psy2060 53 LHDMGARYHWGDTCETDIT--------------KSDCK-GVCSPGA-TCSLNP---------------SGGYICDDCSLA 101 (193)
Q Consensus 53 ~~C~C~~g~~G~~C~~~~~--------------~~~C~-~pC~~gg-~C~~~~---------------~~~~~C~~C~~g 101 (193)
-.|.|..+++|.+|+.-.. .+.|. -.|.+.+ .|.-.+ .++-.|..|..+
T Consensus 286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n 365 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365 (403)
T ss_dssp EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence 3588888888888875321 12565 4565444 474210 145678449888
Q ss_pred CCccccccccceecccCCC
Q psy2060 102 GSYEHYDRLCRLRARSFPK 120 (193)
Q Consensus 102 ~~~~~~g~~C~~~~~sF~g 120 (193)
+. |.+|+.-...|.+
T Consensus 366 t~----G~~CErC~~GYyg 380 (403)
T 2y38_A 366 TT----GINCERCLPGFFR 380 (403)
T ss_dssp EE----STTSCEECTTCEE
T ss_pred Cc----CCCCCcCCCCccC
Confidence 77 9999986555544
No 163
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=75.36 E-value=2.2 Score=33.93 Aligned_cols=33 Identities=24% Similarity=0.544 Sum_probs=24.3
Q ss_pred CCCCCcEEeeCCC-CceecccCCCCCCccccccccce
Q psy2060 78 VCSPGATCSLNPS-GGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 78 pC~~gg~C~~~~~-~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.|.+ .|...+. .+|+|. ||.|+....++..|..
T Consensus 276 ~Cs~--~C~~~~~~~~~~C~-C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 276 GCSH--LCLMSPVKPFYQCA-CPTGVKLLENGKTCKD 309 (318)
T ss_dssp GCSS--EEEECSSTTSEEEE-CSTTCCBCTTSSCBCC
T ss_pred Ccce--EEecCCCCCCeEEE-CCCCCEECCCCCCCCC
Confidence 4543 6887762 279999 9999987667788864
No 164
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=74.87 E-value=1.7 Score=36.23 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=16.5
Q ss_pred CCCcEEeeCC--CCceecccCCCCCC
Q psy2060 80 SPGATCSLNP--SGGYICDDCSLAGS 103 (193)
Q Consensus 80 ~~gg~C~~~~--~~~~~C~~C~~g~~ 103 (193)
..+|.|.+-. ..+..|+.|.+||.
T Consensus 354 ~~~G~C~~C~~nt~G~~CErC~~GYy 379 (403)
T 2y38_A 354 QGGGVCLDCQHHTTGINCERCLPGFF 379 (403)
T ss_dssp CCCEEESSCCSSEESTTSCEECTTCE
T ss_pred CCCCCCCCCcCcCcCCCCCcCCCCcc
Confidence 4578886432 25667888989887
No 165
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.96 E-value=8.8 Score=33.56 Aligned_cols=37 Identities=35% Similarity=0.868 Sum_probs=28.0
Q ss_pred CCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 74 DCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 74 ~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
+|. ..|.+ .|.+.+.++|+|. ||.||....++..|..
T Consensus 267 ~C~~~ng~C~~--~C~~~~~~~~~C~-C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 267 ECASSNGHCSH--LCLAVPVGGFVCG-CPAHYSLNADNRTCSA 306 (628)
T ss_dssp TTTTTGGGCSS--EEEEETTTEEEEE-CSTTCEECTTSSCEEC
T ss_pred EeccCCCCcch--hhhcCCCCCeeEE-cCCCcEecccCCcCcc
Confidence 666 35654 7887765899999 9999987666788864
No 166
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=73.36 E-value=0.82 Score=32.89 Aligned_cols=21 Identities=19% Similarity=0.029 Sum_probs=17.2
Q ss_pred ccCCCCceeeCCCCCC----CCccc
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCE 67 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~ 67 (193)
.++.++|.|.|++||+ +..|+
T Consensus 142 ~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 142 HNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp EEETTEEEEECCTTEEECTTSSCEE
T ss_pred ccCCCCEEEeCCCCcEECCCCCccc
Confidence 5778899999999998 55664
No 167
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=72.42 E-value=1.2 Score=31.49 Aligned_cols=21 Identities=5% Similarity=-0.039 Sum_probs=17.1
Q ss_pred ccCCCCceeeCCCCCC----CCccc
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCE 67 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~ 67 (193)
.+..++|.|.|++||+ |..|+
T Consensus 133 ~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 133 NNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCcCCCEEEecCCCcEECCCCCccc
Confidence 5678899999999998 55664
No 168
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=72.29 E-value=1.4 Score=34.43 Aligned_cols=32 Identities=19% Similarity=0.459 Sum_probs=24.9
Q ss_pred CCCCCcEEeeCCCCceecccCCCCCCccccccccce
Q psy2060 78 VCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 78 pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.|.+ .|.+.. ++|+|. |+.||....+++.|..
T Consensus 12 ~C~~--~C~~~~-~~~~C~-C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 12 GCQH--FCLPGQ-ESYTCS-CAQGYRLGEDHKQCVP 43 (283)
T ss_dssp SCSS--BCCCCT-TSCCCB-CCTTEEECTTSSCEEE
T ss_pred CCCC--EeeCCC-CCeEec-CCCCcccCCCCCcccc
Confidence 5554 677777 999999 9999877666778875
No 169
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=70.63 E-value=3.1 Score=27.74 Aligned_cols=46 Identities=11% Similarity=0.000 Sum_probs=30.2
Q ss_pred CCcee-cCCCCccCCCCccee------ecCC--------ccCCCCceeeCCCCCC-----CCcccc
Q psy2060 23 QPYLS-GLPDNEGLEKRVQTF------VDGG--------HRTLDLLHDMGARYHW-----GDTCET 68 (193)
Q Consensus 23 ~~~~c-C~~g~~g~~~~c~~~------~~gg--------~~~~~~~~C~C~~g~~-----G~~C~~ 68 (193)
+.-+| |.+||.|....|-.+ -||| ...+....|.|.++|. |..|..
T Consensus 30 G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~ 95 (105)
T 1n1i_A 30 GTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCSS 95 (105)
T ss_dssp SCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEECC
T ss_pred CCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEECC
Confidence 33468 999999876456544 1255 2224689999988864 666653
No 170
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=69.93 E-value=2 Score=34.52 Aligned_cols=28 Identities=21% Similarity=0.494 Sum_probs=22.7
Q ss_pred EEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 84 TCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 84 ~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
.|...+ ++|+|. ||.++. ..++..|...
T Consensus 317 lCl~~~-~~~~C~-C~~g~~-~~d~~~C~~~ 344 (349)
T 3v64_C 317 LCLPSG-QNYTCA-CPTGFR-KINSHACALE 344 (349)
T ss_dssp EEECCT-TSCEEE-CCTTEE-EETTTEEEEG
T ss_pred EeecCC-CCCeeE-CCCCCc-CCCCCcccch
Confidence 788888 899999 999987 6667888643
No 171
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=65.49 E-value=2.3 Score=37.15 Aligned_cols=35 Identities=29% Similarity=0.655 Sum_probs=26.7
Q ss_pred CCC---CCCCCCcEEeeCCCCceecccCCCCCCccccccccc
Q psy2060 74 DCK---GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 74 ~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
+|. ..|.+ .|.+.+ ++|+|. ||.|+....++..|.
T Consensus 580 ~C~~~ng~C~~--~C~~~~-~~~~C~-C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 580 PCAEENGGCSH--LCLYRP-QGLRCA-CPIGFELISDMKTCI 617 (619)
T ss_dssp GGGSGGGGCSS--EEEEET-TEEEEE-CCTTCEECSSTTCEE
T ss_pred cCCCCCCChhH--hhccCC-CCeEEE-CCCCCEECCCCCcCC
Confidence 665 35654 888888 889999 999997766677774
No 172
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=64.97 E-value=1.7 Score=38.84 Aligned_cols=38 Identities=13% Similarity=-0.073 Sum_probs=27.7
Q ss_pred cCCCCccCCCCcceee---c--CC--ccCCCCceeeCCCCCCCCccccc
Q psy2060 28 GLPDNEGLEKRVQTFV---D--GG--HRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 28 C~~g~~g~~~~c~~~~---~--gg--~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
|.+||.|.. |.+.. + +| .-..+ .|.|.+||+|..|...
T Consensus 522 C~~gw~g~d--c~i~~~Cp~~C~ghG~C~~G--~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 522 KQQTWAIDN--VYIGDGCLDMCSGHGRCVQG--SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp TTCCEEEEE--EEEESCSSGGGGGSEEEETT--EEEECTTEESTTSCEE
T ss_pred cCCCccccc--ccccCCCCcccCCCcEECCC--CEeeCCCccCCCcCcc
Confidence 899999998 87421 1 22 22222 8999999999999866
No 173
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=54.30 E-value=56 Score=28.35 Aligned_cols=33 Identities=24% Similarity=0.544 Sum_probs=24.4
Q ss_pred CCCCCcEEeeCCC-CceecccCCCCCCccccccccce
Q psy2060 78 VCSPGATCSLNPS-GGYICDDCSLAGSYEHYDRLCRL 113 (193)
Q Consensus 78 pC~~gg~C~~~~~-~~~~C~~C~~g~~~~~~g~~C~~ 113 (193)
.|.+ .|...+. .+|+|. ||.||....++..|..
T Consensus 281 ~Cs~--lCl~~~~~~~~~C~-C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 281 GCSH--LCLMSPVKPFYQCA-CPTGVKLLENGKTCKD 314 (619)
T ss_dssp GCSS--EEEECSSTTSEEEE-CCTTCCBCTTSSCBCS
T ss_pred cccc--eEECCCCCCCceEe-CCchheecccCcccCC
Confidence 4543 7877652 479999 9999987666788865
No 174
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=53.28 E-value=6.8 Score=35.98 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=21.4
Q ss_pred cceeecCC--ccCCCCceeeCCCCCCCCccccc
Q psy2060 39 VQTFVDGG--HRTLDLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 39 c~~~~~gg--~~~~~~~~C~C~~g~~G~~C~~~ 69 (193)
|..|.||| ....+...|.|+++|.|..|+..
T Consensus 502 C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 502 CAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp SCCBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred CCCCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 44555666 33345677888999999888865
No 175
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=52.24 E-value=12 Score=22.83 Aligned_cols=27 Identities=30% Similarity=0.773 Sum_probs=21.4
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCC
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSL 100 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~ 100 (193)
++|. ..|..|..|+....+...|. |+.
T Consensus 2 ~~C~~~~C~~g~~C~~~~~~~~~C~-C~~ 29 (74)
T 1lr7_A 2 ETCENVDCGPGKKCRMNKKNKPRCV-CAP 29 (74)
T ss_dssp CCSTTCCCCTTEEEEECTTSCEEEE-ECC
T ss_pred CCCCCCcCcCCCEEeECCCCCeeec-CCC
Confidence 3899 99999999998654667888 853
No 176
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=43.08 E-value=8.3 Score=29.83 Aligned_cols=22 Identities=9% Similarity=-0.102 Sum_probs=17.1
Q ss_pred ccCCCCceeeCCCCCC----CCcccc
Q psy2060 47 HRTLDLLHDMGARYHW----GDTCET 68 (193)
Q Consensus 47 ~~~~~~~~C~C~~g~~----G~~C~~ 68 (193)
.++.++|+|.|++||. +..|..
T Consensus 18 ~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 18 LPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp CCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred eCCCCCeEecCCCCcccCCCCCcccc
Confidence 5778899999999995 455653
No 177
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=38.87 E-value=15 Score=31.61 Aligned_cols=38 Identities=11% Similarity=-0.094 Sum_probs=24.6
Q ss_pred ee-cCCCCccCCCCcceeecCC------------------ccCCCCceeeCCCCCCC
Q psy2060 26 LS-GLPDNEGLEKRVQTFVDGG------------------HRTLDLLHDMGARYHWG 63 (193)
Q Consensus 26 ~c-C~~g~~g~~~~c~~~~~gg------------------~~~~~~~~C~C~~g~~G 63 (193)
.| |.+||......|+.|..|- ....+.+.|.|..+|.-
T Consensus 264 ~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 264 QCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp CCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBC
T ss_pred cEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccc
Confidence 37 8888875544466554321 23346789999998863
No 178
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=37.95 E-value=9.4 Score=32.84 Aligned_cols=44 Identities=18% Similarity=0.337 Sum_probs=25.5
Q ss_pred ceeeCCCCCC--CCcccccCCCCCCC----CCCCCCcEEee-------CCCCceecccCCCCCC
Q psy2060 53 LHDMGARYHW--GDTCETDITKSDCK----GVCSPGATCSL-------NPSGGYICDDCSLAGS 103 (193)
Q Consensus 53 ~~C~C~~g~~--G~~C~~~~~~~~C~----~pC~~gg~C~~-------~~~~~~~C~~C~~g~~ 103 (193)
-.|.|.+||. +..|+ .|. .+....+.|.. ...+.+.|. |..+|.
T Consensus 263 G~C~C~~G~e~~~~~C~------aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~-C~ng~~ 319 (536)
T 3fl7_A 263 GQCLCQAGYEKVEDACQ------ACSPGFFKFEASESPCLECPEHTLPSPEGATSCE-CEEGFF 319 (536)
T ss_dssp CCCEECTTEEEETTEEE------ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCE-ECTTCB
T ss_pred CcEeccCccccCCceee------ecCCCCCcccCCCCccccCCCCCCCCCCCccEEE-Eecccc
Confidence 4799999997 45554 232 22222233332 113788899 988775
No 179
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=36.54 E-value=18 Score=31.64 Aligned_cols=28 Identities=18% Similarity=0.436 Sum_probs=20.8
Q ss_pred EEeeCCCCceecccCCCCCCccccccccc
Q psy2060 84 TCSLNPSGGYICDDCSLAGSYEHYDRLCR 112 (193)
Q Consensus 84 ~C~~~~~~~~~C~~C~~g~~~~~~g~~C~ 112 (193)
.|.+.+.+.++|. ||.++....++..|.
T Consensus 592 ~C~~~~~~~~~C~-C~~g~~l~~d~~~~~ 619 (628)
T 4a0p_A 592 ICLVKGDGTTRCS-CPMHLVLLQDELSCG 619 (628)
T ss_dssp EEEECTTSCEEEE-CCTTEEECTTSSCEE
T ss_pred hcccCCCCCeeee-CCCCCEECCCCCcCC
Confidence 6777664678999 999887665677774
No 180
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=35.70 E-value=11 Score=32.06 Aligned_cols=14 Identities=21% Similarity=0.178 Sum_probs=6.9
Q ss_pred eeeCCCCCCCCccc
Q psy2060 54 HDMGARYHWGDTCE 67 (193)
Q Consensus 54 ~C~C~~g~~G~~C~ 67 (193)
.|.|.+||.|..||
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 46899999999996
No 181
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=32.23 E-value=2.4e+02 Score=24.11 Aligned_cols=35 Identities=14% Similarity=0.389 Sum_probs=23.0
Q ss_pred CCC-C-C-CCCCCcEEeeCCCCceecccCCCC-CCccccccccce
Q psy2060 73 SDC-K-G-VCSPGATCSLNPSGGYICDDCSLA-GSYEHYDRLCRL 113 (193)
Q Consensus 73 ~~C-~-~-pC~~gg~C~~~~~~~~~C~~C~~g-~~~~~~g~~C~~ 113 (193)
++| . . ||+||+.- .....-.|. |+++ ++. |..|+.
T Consensus 351 ~~c~~C~~PC~nn~~~--l~g~~C~C~-C~~~~~t~---~~~C~~ 389 (540)
T 3nsj_A 351 ARWQNCSRPCRSGQHK--SSHDSCQCE-CQDSKVTN---QDCCPR 389 (540)
T ss_dssp CBCCCTTSCCBTTEEE--CSSCTTCEE-ESCTTTBC---GGGCBS
T ss_pred CchhhhcccccCCCcc--CCCCceEee-CCCCCCcc---cccccc
Confidence 477 5 5 99999753 333556788 8876 232 777775
No 182
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=30.62 E-value=73 Score=20.59 Aligned_cols=52 Identities=27% Similarity=0.526 Sum_probs=38.3
Q ss_pred CCCceeeCCCCCC--CCcccccCCCCCCC---CCCCCCcEEeeCCCCceecccCCCCCC
Q psy2060 50 LDLLHDMGARYHW--GDTCETDITKSDCK---GVCSPGATCSLNPSGGYICDDCSLAGS 103 (193)
Q Consensus 50 ~~~~~C~C~~g~~--G~~C~~~~~~~~C~---~pC~~gg~C~~~~~~~~~C~~C~~g~~ 103 (193)
.+.-.|+|..+|. |..|-.+.+ ..|. .-|...+.|.......-.|. |...+.
T Consensus 23 dg~EecRCllnykk~~~kCV~~~~-~~C~~NNGGCd~nA~C~~~~~~kIvC~-C~~~~~ 79 (95)
T 1b9w_A 23 DGTEEWRCLLYFKEDAGKCVPAPN-MTCKDKNGGCAPEAECKMNDKNEIVCK-CTKEGS 79 (95)
T ss_dssp TSCEEEEECTTEEEETTEEEECTT-CCTTTGGGGSCTTSEEEECTTSCEEEE-CCSTTE
T ss_pred CCCEEEEEECCeEecCCEEEcCCC-CCccccCCCcCCCcceeecCCCcEEEE-CCCCCC
Confidence 4577899999997 667866543 4787 67888899986643567899 977653
No 183
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=28.65 E-value=26 Score=30.13 Aligned_cols=36 Identities=19% Similarity=0.477 Sum_probs=28.3
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCCCCCcccccccccee
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSLAGSYEHYDRLCRLR 114 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~g~~~~~~g~~C~~~ 114 (193)
++|. .||.+++...... ..-.|. |+.++. |..|+..
T Consensus 447 ~~c~C~pC~~~~~~~~~g-t~C~c~-C~~g~~----G~~c~~~ 483 (537)
T 3ojy_B 447 SSCHCAPCQGNGVPVLKG-SRCDCI-CPVGSQ----GLACEVS 483 (537)
T ss_dssp CGGGSCCCSTTCEEEEET-TEEEEE-CCTTEE----TGGGCEE
T ss_pred CcccCCCCCcCCEEecCC-Cceecc-CCCCcc----cccccCC
Confidence 4777 8999999877654 667788 988876 8888774
No 184
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=28.01 E-value=12 Score=31.86 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=0.0
Q ss_pred CCCce---eeCCCCCCCCcccc
Q psy2060 50 LDLLH---DMGARYHWGDTCET 68 (193)
Q Consensus 50 ~~~~~---C~C~~g~~G~~C~~ 68 (193)
.|.+. |.|.+||.|..||-
T Consensus 473 ~G~~~CG~C~C~~G~~G~~CeC 494 (503)
T 3v4v_B 473 QGHLQCGVCSCAPGRLGRLCES 494 (503)
T ss_dssp ----------------------
T ss_pred CeeEeCCceECcCCCcCCCCCC
Confidence 34454 58999999999963
No 185
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=27.36 E-value=20 Score=29.82 Aligned_cols=19 Identities=11% Similarity=-0.153 Sum_probs=16.9
Q ss_pred CCceeeCCCCCCCCccccc
Q psy2060 51 DLLHDMGARYHWGDTCETD 69 (193)
Q Consensus 51 ~~~~C~C~~g~~G~~C~~~ 69 (193)
..|.|.|-.||.|..|+..
T Consensus 395 ~~F~C~Cy~gw~G~~C~~~ 413 (424)
T 2pe4_A 395 VEFKCRCYPGWQAPWCERK 413 (424)
T ss_dssp HHEEEEECTTBCTTTTCSB
T ss_pred hCcEeeccCCCCcccccCC
Confidence 4699999999999999865
No 186
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=24.63 E-value=40 Score=23.85 Aligned_cols=63 Identities=13% Similarity=0.080 Sum_probs=31.2
Q ss_pred cCCCCccCCCCcceeecCCccCCCCceee-CCCC--CCCCcccccCCCCCCC--CCCCCC-cEEeeC---CCCceecccC
Q psy2060 28 GLPDNEGLEKRVQTFVDGGHRTLDLLHDM-GARY--HWGDTCETDITKSDCK--GVCSPG-ATCSLN---PSGGYICDDC 98 (193)
Q Consensus 28 C~~g~~g~~~~c~~~~~gg~~~~~~~~C~-C~~g--~~G~~C~~~~~~~~C~--~pC~~g-g~C~~~---~~~~~~C~~C 98 (193)
|+||+.-.. .|. ...+.-.|. |++| |+-..=.. ..|. ..|..+ +.=+.. ....-.|. |
T Consensus 47 CppG~~v~~-~Ct-------~~~~~t~C~pC~~g~ty~~~~n~~----~~C~~C~~C~~~~g~~~~~~CT~t~dtvC~-C 113 (156)
T 3tje_F 47 CPPGERKAR-DCT-------VNGDEPDCVPCQEGKEYTDKAHFS----SKCRRCRLCDEGHGLEVEINCTRTQNTKCR-C 113 (156)
T ss_dssp BCTTEEESS-CCC-------SSSCCCCEEECCTTTEECSSCBSC----SCCEECCCCCGGGTEEEEECCBTTBCCEEE-E
T ss_pred CCCCCeECC-cCC-------CCCCCCcceeCCCCCeeeccCCCC----CcCcCCCCCCCCcceEEeccccCCCCCeee-C
Confidence 777775432 342 111246785 9988 54321111 1565 567654 111111 12445688 9
Q ss_pred CCCCC
Q psy2060 99 SLAGS 103 (193)
Q Consensus 99 ~~g~~ 103 (193)
++||.
T Consensus 114 ~~G~f 118 (156)
T 3tje_F 114 KPNFF 118 (156)
T ss_dssp CTTEE
T ss_pred CCCCE
Confidence 88765
No 187
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=24.31 E-value=46 Score=25.12 Aligned_cols=25 Identities=28% Similarity=0.850 Sum_probs=21.0
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccC
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDC 98 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C 98 (193)
++|. ..|..|..|+....+...|. |
T Consensus 4 dpC~~~~C~~g~~C~~~~~~~~~Cv-C 29 (229)
T 1nub_A 4 APCQNHHCKHGKVCELDENNTPMCV-C 29 (229)
T ss_dssp CTTTTCCCCTTEEEEECTTCCEEEE-E
T ss_pred CCCCCCcCCCCCEeeeCCCCCeeee-c
Confidence 4999 99999999998654777888 8
No 188
>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus}
Probab=24.20 E-value=52 Score=22.96 Aligned_cols=27 Identities=30% Similarity=0.773 Sum_probs=21.0
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCC
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSL 100 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~ 100 (193)
++|. ..|..|..|+....+...|. |+.
T Consensus 4 ~~C~~~~C~~g~~C~~~~~~~~~C~-C~~ 31 (152)
T 2arp_F 4 ETCENVDCGPGKKCRMNKKNKPRCV-CAP 31 (152)
T ss_dssp -CCTTCCCCTTEEEEECTTSCEEEE-ECC
T ss_pred CCCCCCcCCCCCEeeeCCCCCeeec-CCC
Confidence 4899 89999999987543667888 854
No 189
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D
Probab=24.18 E-value=62 Score=25.41 Aligned_cols=27 Identities=30% Similarity=0.773 Sum_probs=21.7
Q ss_pred CCCC-CCCCCCcEEeeCCCCceecccCCC
Q psy2060 73 SDCK-GVCSPGATCSLNPSGGYICDDCSL 100 (193)
Q Consensus 73 ~~C~-~pC~~gg~C~~~~~~~~~C~~C~~ 100 (193)
++|. ..|..|..|+....+..+|. |+.
T Consensus 64 d~C~~v~C~~g~~C~~~~~g~~~Cv-C~~ 91 (288)
T 3hh2_C 64 ETCENVDCGPGKKCRMNKKNKPRCV-CAP 91 (288)
T ss_dssp SSSTTCCCCTTEEEEECTTSCEEEE-ECC
T ss_pred ccCCCCcCCCCCEeeECCCCCeeee-CCc
Confidence 3899 99999999987544778898 754
No 190
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=21.74 E-value=2.4e+02 Score=20.62 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=32.6
Q ss_pred CCCCceeEEEEEEEeCCCCeE-EEEeecCCCCCceEEEEecCCeeEEEEEEe
Q psy2060 129 LKQRNRLHIKLQFSTLHDSGL-LLYNGRYNERHDFIALELTDSGRSVQFSWS 179 (193)
Q Consensus 129 ~~~~~~~~i~~~f~T~~~~gl-Ll~~g~~~~~~dfi~l~l~~G~~~l~~~~~ 179 (193)
++...+.+|.++|++...... ||-.........|+.|-|.+|. +.+.+.
T Consensus 36 lk~L~~gTI~v~fks~~~~~q~LfSIsN~k~~n~yf~lyi~~g~--lg~e~R 85 (191)
T 2v73_A 36 FSSLEEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGGK--VGYELR 85 (191)
T ss_dssp TTTCSSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSSE--EEEEEE
T ss_pred hcCcCCcEEEEEEecCCCcceEEEEccCCCCccceEEEEEeCCE--EEEEEe
Confidence 444556789999999984322 3333322457789999999998 666543
Done!