Query psy2064
Match_columns 221
No_of_seqs 130 out of 255
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 23:22:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1edm_B Factor IX; epidermal gr 98.9 8.6E-10 2.9E-14 69.4 4.4 38 155-214 2-39 (39)
2 3u7u_G Neuregulin 1; signaling 98.9 3.4E-10 1.2E-14 77.5 2.4 42 155-213 7-48 (55)
3 1a3p_A Epidermal growth factor 98.7 6.9E-09 2.3E-13 67.5 3.6 39 157-215 1-42 (45)
4 1egf_A Epidermal growth factor 98.7 1.6E-08 5.5E-13 68.0 4.3 39 157-215 4-45 (53)
5 1hae_A Heregulin-alpha; growth 98.7 4.5E-09 1.5E-13 72.9 1.4 43 157-216 7-49 (63)
6 1k36_A Epiregulin; EGF-like fo 98.6 1.4E-08 4.7E-13 66.8 2.6 39 156-215 3-44 (46)
7 1nql_B Epidermal growth factor 98.5 2.4E-08 8E-13 67.6 1.4 35 161-215 11-45 (53)
8 2k2s_B Micronemal protein 6; m 98.4 2.5E-08 8.4E-13 69.6 -0.1 38 155-214 10-50 (61)
9 1tpg_A T-plasminogen activator 98.4 1.3E-07 4.3E-12 70.0 3.7 44 155-218 47-90 (91)
10 3ca7_A Protein spitz; argos, E 98.3 1E-07 3.5E-12 63.8 0.9 37 161-215 13-49 (52)
11 3ltf_D Protein spitz; receptor 98.3 1E-07 3.4E-12 65.6 0.6 41 157-215 5-49 (58)
12 1x7a_L Coagulation factor IX, 98.0 2.8E-06 9.7E-11 67.8 3.1 38 155-214 47-84 (146)
13 1g1s_A P-selectin; selectin, l 98.0 2.2E-06 7.4E-11 68.1 1.8 37 157-215 120-156 (162)
14 2c4f_L Coagulation factor VII 97.9 3E-06 1E-10 67.0 2.5 38 155-214 46-83 (142)
15 1xdt_R Hbegf, heparin-binding 97.9 3.7E-06 1.3E-10 61.5 2.1 40 156-216 37-79 (79)
16 2vj3_A Neurogenic locus notch 97.9 1.6E-05 5.6E-10 61.9 5.8 39 155-215 82-120 (135)
17 3asi_A Neurexin-1-alpha; beta- 97.8 8.1E-06 2.8E-10 74.1 3.8 42 152-215 181-223 (410)
18 1aut_L Activated protein C; se 97.8 7.7E-06 2.6E-10 62.3 2.5 38 155-214 5-50 (114)
19 1nfu_B Coagulation factor XA, 97.8 3.4E-06 1.1E-10 71.0 0.0 38 155-214 41-78 (195)
20 2vh0_B Activated factor XA lig 97.7 4.1E-06 1.4E-10 65.7 0.0 38 155-214 41-78 (134)
21 4d90_A EGF-like repeat and dis 97.7 2.1E-05 7.2E-10 61.1 4.0 39 155-215 96-134 (143)
22 2vj3_A Neurogenic locus notch 97.7 2.1E-05 7.2E-10 61.3 3.9 36 156-213 5-42 (135)
23 3e50_C Protransforming growth 97.6 2.6E-05 9E-10 52.2 2.9 33 161-214 13-45 (50)
24 2ygo_A WIF-1, WNT inhibitory f 97.6 3.4E-05 1.1E-09 64.8 3.9 32 157-214 149-180 (188)
25 4d90_A EGF-like repeat and dis 97.6 3.5E-05 1.2E-09 59.8 3.7 44 155-213 51-94 (143)
26 1g1t_A E-selectin; EGF, adhesi 97.6 1.7E-05 5.7E-10 62.4 1.5 37 157-215 120-156 (157)
27 1emn_A Fibrillin; extracellula 97.6 6.3E-05 2.2E-09 54.0 4.5 70 116-212 4-78 (82)
28 2rnl_A Amphiregulin; AR, color 97.5 5.4E-05 1.8E-09 50.6 3.3 37 157-214 10-49 (50)
29 2i9a_A Urokinase-type plasmino 97.5 4.7E-05 1.6E-09 61.1 3.1 35 163-217 14-49 (145)
30 2fd6_A Urokinase-type plasmino 97.5 4.1E-05 1.4E-09 59.6 2.5 35 163-216 2-36 (122)
31 1iox_A Betacellulin; EGF-like 97.4 4.1E-05 1.4E-09 51.1 1.5 34 161-215 13-46 (50)
32 3qcw_A Neurexin-1-alpha; synap 97.4 8.7E-05 3E-09 76.6 4.5 42 152-215 1013-1055(1245)
33 3cfw_A L-selectin; EGF, cell a 97.2 0.00017 5.9E-09 57.0 3.4 37 157-215 120-156 (164)
34 1emn_A Fibrillin; extracellula 97.1 0.00021 7.3E-09 51.2 2.7 36 155-213 4-42 (82)
35 1z6c_A Vitamin K-dependent pro 97.1 0.00018 6.2E-09 52.0 1.8 35 156-213 3-43 (87)
36 4fbr_A Lectin, myxobacterial h 97.0 2.5E-05 8.4E-10 68.9 -4.4 38 157-216 100-137 (267)
37 3qcw_A Neurexin-1-alpha; synap 96.9 0.00033 1.1E-08 72.3 2.9 38 156-215 619-657 (1245)
38 2vj2_A Jagged-1; signalling, p 96.9 0.0003 1E-08 56.9 2.1 37 157-214 132-169 (169)
39 1lmj_A Fibrillin 1; EGF, calci 96.9 0.00037 1.3E-08 50.2 2.2 35 156-213 3-44 (86)
40 1z1y_A Ookinete surface protei 96.9 0.00028 9.7E-09 57.4 1.6 39 157-213 92-135 (186)
41 1yo8_A Thrombospondin-2; EGF, 96.9 0.0005 1.7E-08 67.0 3.4 37 155-213 43-85 (634)
42 1z1y_A Ookinete surface protei 96.8 0.00066 2.2E-08 55.2 3.2 56 135-215 117-176 (186)
43 2bou_A EGF-like module contain 96.6 0.00063 2.1E-08 53.0 1.9 41 155-217 95-137 (143)
44 1apq_A Complement protease C1R 96.5 0.0021 7.3E-08 41.8 3.4 18 196-213 30-47 (53)
45 2bou_A EGF-like module contain 96.3 0.0012 4.1E-08 51.4 1.4 36 155-212 43-81 (143)
46 1lmj_A Fibrillin 1; EGF, calci 96.2 0.0016 5.4E-08 46.8 1.5 36 155-213 45-82 (86)
47 1dx5_I Thrombomodulin; serine 96.1 0.0015 5.1E-08 49.7 1.3 34 155-211 3-36 (118)
48 3h5c_B Vitamin K-dependent pro 96.1 0.0049 1.7E-07 53.6 4.7 36 154-213 41-79 (317)
49 2w86_A Fibrillin-1, fibrillin1 96.1 0.0015 5.3E-08 51.1 1.3 36 155-213 106-143 (147)
50 2gy5_A Angiopoietin-1 receptor 96.1 0.0022 7.5E-08 59.3 2.5 37 157-217 196-234 (423)
51 2wg3_C Hedgehog-interacting pr 96.0 0.0012 4.2E-08 61.5 0.2 33 157-215 424-456 (463)
52 4fbr_A Lectin, myxobacterial h 95.7 0.00039 1.3E-08 61.2 -4.4 35 159-215 169-203 (267)
53 1uzk_A Fibrillin-1; glycoprote 95.6 0.0031 1.1E-07 50.1 1.1 37 155-214 121-159 (162)
54 2w2n_E LDL receptor, low-densi 95.6 0.0045 1.5E-07 46.6 1.9 51 135-213 51-103 (107)
55 2w2n_E LDL receptor, low-densi 95.6 0.0044 1.5E-07 46.7 1.8 37 155-213 23-67 (107)
56 3p5b_L Low density lipoprotein 95.5 0.013 4.3E-07 52.8 4.8 52 134-213 21-74 (400)
57 2ygq_A WIF-1, WNT inhibitory f 95.1 0.01 3.5E-07 52.9 2.8 15 157-172 149-163 (324)
58 1z6c_A Vitamin K-dependent pro 95.0 0.0094 3.2E-07 42.8 1.8 35 155-214 44-78 (87)
59 1yo8_A Thrombospondin-2; EGF, 94.9 0.011 3.6E-07 57.8 2.7 41 155-213 101-145 (634)
60 1aut_L Activated protein C; se 94.8 0.016 5.6E-07 43.5 3.0 16 196-211 72-87 (114)
61 1dx5_I Thrombomodulin; serine 94.8 0.0057 1.9E-07 46.5 0.4 34 155-212 79-113 (118)
62 3fcs_B Integrin beta-3; beta p 94.6 0.0086 2.9E-07 58.9 1.2 36 158-215 436-474 (690)
63 3v65_B Low-density lipoprotein 94.6 0.0083 2.8E-07 53.6 1.0 70 116-213 2-82 (386)
64 2ygq_A WIF-1, WNT inhibitory f 94.4 0.02 6.8E-07 51.0 2.8 16 199-214 229-244 (324)
65 2gy5_A Angiopoietin-1 receptor 94.1 0.028 9.6E-07 51.9 3.4 36 158-217 245-281 (423)
66 2c4f_L Coagulation factor VII 93.9 0.023 7.7E-07 44.4 2.0 35 157-213 86-128 (142)
67 2wg3_C Hedgehog-interacting pr 93.9 0.0074 2.5E-07 56.2 -1.0 19 199-217 408-427 (463)
68 2kl7_A Fibulin-4; secreted, ca 93.9 0.027 9.1E-07 39.6 2.1 18 156-173 3-22 (71)
69 3fcs_B Integrin beta-3; beta p 93.8 0.045 1.5E-06 53.8 4.3 35 154-214 562-600 (690)
70 3zyj_B Netrin-G1; cell adhesio 93.4 0.014 4.9E-07 54.4 0.0 27 162-213 371-397 (426)
71 1nfu_B Coagulation factor XA, 93.2 0.026 8.8E-07 47.2 1.3 33 157-213 82-120 (195)
72 2vj2_A Jagged-1; signalling, p 92.8 0.026 8.8E-07 45.3 0.7 17 198-214 113-129 (169)
73 1x7a_L Coagulation factor IX, 92.8 0.033 1.1E-06 43.9 1.3 18 196-213 104-125 (146)
74 2vh0_B Activated factor XA lig 92.5 0.039 1.3E-06 42.7 1.3 33 157-213 82-120 (134)
75 4hti_A Receptor-type tyrosine- 92.4 0.82 2.8E-05 34.4 8.5 77 16-118 18-95 (99)
76 3k6s_B Integrin beta-2; cell r 92.0 0.074 2.5E-06 52.3 2.9 33 156-214 557-592 (687)
77 1tpg_A T-plasminogen activator 91.7 0.049 1.7E-06 39.5 1.0 15 197-213 30-44 (91)
78 3t5o_A Complement component C6 91.3 0.11 3.8E-06 52.2 3.4 39 155-215 496-534 (913)
79 4aqs_A Laminin subunit beta-1; 91.3 0.038 1.3E-06 51.8 0.0 36 158-213 489-524 (525)
80 2jkh_L Factor X light chain; p 91.0 0.083 2.8E-06 34.9 1.5 13 196-208 19-31 (55)
81 1ijq_A LDL receptor, low-densi 90.7 0.14 4.7E-06 44.1 3.0 12 197-208 295-306 (316)
82 2qt7_A Receptor-type tyrosine- 90.2 1.4 4.7E-05 32.7 7.6 68 24-117 20-87 (91)
83 1szb_A Mannose binding lectin- 89.2 0.19 6.3E-06 39.8 2.5 31 155-209 123-158 (170)
84 1uzk_A Fibrillin-1; glycoprote 89.0 0.062 2.1E-06 42.4 -0.5 9 165-173 59-67 (162)
85 2p28_B Integrin beta-2; hybrid 87.7 0.16 5.5E-06 42.9 1.2 16 200-215 200-215 (217)
86 3m0c_C LDL receptor, low-densi 85.0 0.65 2.2E-05 46.0 4.1 33 155-210 351-383 (791)
87 2p28_B Integrin beta-2; hybrid 84.8 0.33 1.1E-05 40.9 1.7 28 161-214 142-175 (217)
88 3m0c_C LDL receptor, low-densi 82.2 0.66 2.2E-05 45.9 2.8 34 158-213 309-350 (791)
89 3v64_C Agrin; beta propeller, 81.9 0.51 1.7E-05 41.3 1.7 11 198-208 324-334 (349)
90 1n7d_A LDL receptor, low-densi 81.8 0.97 3.3E-05 43.7 3.8 33 155-211 333-366 (699)
91 1q4g_A Prostaglandin G/H synth 81.0 0.48 1.6E-05 45.2 1.3 17 156-172 2-18 (553)
92 3v65_B Low-density lipoprotein 79.1 2.1 7E-05 37.8 4.7 11 198-208 367-377 (386)
93 4aqs_A Laminin subunit beta-1; 79.0 1 3.5E-05 42.0 2.8 16 198-213 459-474 (525)
94 3nt1_A Prostaglandin-endoperox 78.7 0.81 2.8E-05 44.1 2.1 16 157-172 2-17 (587)
95 3k6s_B Integrin beta-2; cell r 78.6 0.85 2.9E-05 44.8 2.2 31 158-214 474-514 (687)
96 1kli_L Factor VIIA; extrinsic 78.5 1.1 3.9E-05 31.0 2.2 11 198-208 26-36 (69)
97 1kig_L Factor XA; glycoprotein 77.6 0.71 2.4E-05 29.9 0.9 13 196-208 16-28 (51)
98 1nzi_A Complement C1S componen 77.0 1.7 5.7E-05 33.5 3.1 15 196-210 136-150 (159)
99 1n7d_A LDL receptor, low-densi 75.3 1.3 4.5E-05 42.8 2.5 18 196-213 312-332 (699)
100 3sov_A LRP-6, low-density lipo 72.2 2.8 9.6E-05 36.2 3.6 11 198-208 289-299 (318)
101 3fby_A COMP, cartilage oligome 70.5 2 6.9E-05 41.2 2.4 35 156-211 18-55 (551)
102 1klo_A Laminin; glycoprotein; 69.6 1.1 3.7E-05 35.6 0.4 16 198-213 130-145 (162)
103 2bz6_L Blood coagulation facto 66.1 2.3 7.8E-05 27.7 1.3 11 198-208 20-30 (53)
104 1lr7_A Follistatin, FS1; hepar 65.3 4.6 0.00016 27.8 2.9 17 157-173 2-18 (74)
105 2wph_E Coagulation factor IXA 63.5 3.4 0.00012 27.5 1.8 12 197-208 19-30 (59)
106 3m20_A 4-oxalocrotonate tautom 63.1 14 0.00049 24.0 5.0 40 6-47 3-42 (62)
107 3h5c_B Vitamin K-dependent pro 61.7 2.8 9.5E-05 35.9 1.4 19 155-173 4-22 (317)
108 2pe4_A Hyaluronidase-1; hyalur 58.6 1.6 5.6E-05 40.5 -0.6 59 157-215 337-413 (424)
109 2e26_A Reelin, reeler protein; 52.6 4.2 0.00014 40.2 1.1 32 157-215 535-566 (725)
110 1u9d_A Hypothetical protein VC 52.5 12 0.00042 28.8 3.6 55 7-62 18-75 (122)
111 3m21_A Probable tautomerase HP 49.0 22 0.00076 23.3 4.1 38 6-44 3-44 (67)
112 3s94_A LRP-6, low-density lipo 47.8 12 0.00042 35.5 3.5 12 197-208 293-304 (619)
113 3p5b_L Low density lipoprotein 46.8 11 0.00037 33.4 2.8 11 198-208 378-388 (400)
114 1hfo_A Migration inhibitory fa 43.8 37 0.0013 24.4 4.9 37 7-44 60-97 (113)
115 2o3b_B Endonuclease, sugar-non 43.5 54 0.0018 25.7 6.0 47 12-68 61-124 (136)
116 1otf_A 4-oxalocrotonate tautom 42.4 35 0.0012 21.4 4.2 38 6-44 3-41 (62)
117 1uiz_A MIF, macrophage migrati 41.9 41 0.0014 24.3 4.9 37 7-44 61-98 (115)
118 4a0p_A LRP6, LRP-6, low-densit 41.7 14 0.00048 35.2 2.8 13 197-209 285-297 (628)
119 2os5_A Acemif; macrophage migr 41.3 42 0.0014 24.4 5.0 38 6-44 60-98 (119)
120 2opa_A Probable tautomerase YW 39.0 43 0.0015 20.9 4.2 38 6-44 3-41 (61)
121 3ojy_A Complement component C8 38.4 16 0.00056 34.6 2.7 37 156-214 464-500 (554)
122 1rju_V Metallothionein; Cu(I)- 38.3 13 0.00044 22.2 1.3 14 158-171 4-17 (36)
123 1mww_A Hypothetical protein HI 38.3 48 0.0017 24.4 4.9 38 6-44 62-100 (128)
124 2aal_A Malonate semialdehyde d 37.6 50 0.0017 24.5 4.9 38 6-44 69-106 (131)
125 2xcz_A Possible ATLS1-like lig 37.2 49 0.0017 23.8 4.7 32 12-44 67-98 (115)
126 3ojy_B Complement component C8 36.9 14 0.00048 34.9 2.0 37 156-214 446-482 (537)
127 3ry0_A Putative tautomerase; o 36.8 48 0.0016 21.4 4.2 33 11-44 9-41 (65)
128 3s94_A LRP-6, low-density lipo 36.4 14 0.00048 35.0 1.9 12 197-208 597-608 (619)
129 3zyj_B Netrin-G1; cell adhesio 35.8 12 0.00041 34.7 1.3 17 197-213 311-327 (426)
130 3mb2_A 4-oxalocrotonate tautom 34.5 61 0.0021 21.4 4.5 33 11-44 10-42 (72)
131 1klo_A Laminin; glycoprotein; 33.9 11 0.00036 29.8 0.5 16 198-213 74-90 (162)
132 1gyx_A YDCE, B1461, hypothetic 32.3 64 0.0022 21.6 4.4 38 6-44 3-42 (76)
133 3ej9_A Alpha-subunit of trans- 31.5 60 0.0021 21.9 4.1 37 7-44 5-42 (76)
134 3abf_A 4-oxalocrotonate tautom 29.5 1.1E+02 0.0036 19.2 5.0 33 11-44 10-42 (64)
135 3b64_A Macrophage migration in 28.7 64 0.0022 23.1 4.1 32 12-44 67-98 (112)
136 4aqt_A Laminin subunit gamma-1 27.7 22 0.00076 32.1 1.6 19 196-214 269-287 (375)
137 2x4k_A 4-oxalocrotonate tautom 27.5 87 0.003 19.3 4.2 37 7-44 7-44 (63)
138 2wkb_A Macrophage migration in 27.2 57 0.002 24.0 3.7 32 12-44 67-98 (125)
139 1xn9_A 30S ribosomal protein S 25.9 65 0.0022 23.8 3.7 28 22-49 31-58 (101)
140 4deq_A Neuropilin-1, vascular 25.8 6.2 0.00021 33.0 -2.3 16 198-213 185-200 (218)
141 2e26_A Reelin, reeler protein; 25.3 22 0.00074 35.2 1.2 31 158-214 187-217 (725)
142 1ylq_A Putative nucleotidyltra 24.9 64 0.0022 22.7 3.4 42 22-65 3-46 (96)
143 2qp2_A Unknown protein; toxin, 24.9 22 0.00074 33.5 1.0 21 199-219 371-391 (511)
144 2ddu_A Reelin; beta-jelly-roll 24.1 14 0.00049 33.8 -0.4 31 157-214 192-224 (387)
145 1ob1_C Major merozoite surface 23.7 46 0.0016 24.8 2.4 34 156-210 4-37 (99)
146 3nsj_A Perforin-1; pore formin 23.6 39 0.0013 31.9 2.6 36 155-213 349-388 (540)
147 4a0p_A LRP6, LRP-6, low-densit 23.3 34 0.0012 32.4 2.1 13 196-208 598-610 (628)
148 3fwu_A Macrophage migration in 22.3 86 0.003 23.7 3.9 28 17-44 92-119 (133)
149 3sek_C Follistatin-related pro 21.8 48 0.0016 27.5 2.5 18 156-173 61-78 (209)
150 1ywx_A 30S ribosomal protein S 21.2 69 0.0024 23.8 3.0 28 22-49 31-58 (102)
151 3hh2_C Follistatin; protein-pr 20.9 57 0.0019 28.4 2.8 18 156-173 63-80 (288)
152 3n4h_A Putative tautomerase; C 20.8 1.2E+02 0.0042 22.8 4.5 34 12-46 72-105 (148)
No 1
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.93 E-value=8.6e-10 Score=69.35 Aligned_cols=38 Identities=26% Similarity=0.576 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.+.|..+||.|+|+|+.. ..+|.|.||+||+|++|++
T Consensus 2 d~d~C~~~pC~ngg~C~~~----------------------~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDD----------------------INSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEE----------------------TTEEEEECCTTCCSTTSCC
T ss_pred ccccCCCCCCCCCCEeEcC----------------------CCceEeECCCCCcCCccCC
Confidence 3478999999999999875 3589999999999999864
No 2
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.92 E-value=3.4e-10 Score=77.54 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
..+.|.++||+|||+|..... +....+|.|.||+||+|++|+
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~-----------------~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKD-----------------LSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECC-----------------C--CCCEEEEECTTEESTTSC
T ss_pred cCCCCcCCCCCCCCCcCCCCc-----------------cCCCCCEeEeCCCCCcCCCcC
Confidence 458999999999999965311 012468999999999999998
No 3
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.73 E-value=6.9e-09 Score=67.49 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=31.2
Q ss_pred CCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
+.|..+ ||.|||+|+... ...+|.|.||+||+|++|.+.
T Consensus 1 ~~C~~~~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 1 PGXPSSYDGYCLNGGVXMHIE--------------------SLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCCTTCCSSCCSSSCEEEECT--------------------TTSSEEEECCTTEETTTTCEE
T ss_pred CCcccCCCCCCCCCCEEEeec--------------------CCCCEEEEcCCCCcCCcCCcc
Confidence 367777 999999998410 145899999999999999854
No 4
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.68 E-value=1.6e-08 Score=67.99 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
+.|..+ ||.|||+|+... ...+|.|.||+||+|.+|.+.
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIE--------------------SLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEES--------------------SSSCEEEECCTTCCSSSSCCC
T ss_pred ccCCCCCCCcCCCCcEEEeeC--------------------CCCCEEEECCCCCcCCcCCcc
Confidence 578776 999999998420 145899999999999999853
No 5
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.67 E-value=4.5e-09 Score=72.91 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT 216 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~ 216 (221)
+.|..+||.|||+|+.... .....+|.|.||+||+|++|....
T Consensus 7 ~~C~~~pC~ngG~C~~~~~-----------------~~~~~~y~C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKD-----------------LSNPSRYLCKCQPGFTGARCTENV 49 (63)
T ss_dssp CHHHHTTSCTTCEEEEEES-----------------SSSSCCEEEECCTTEESTTSCEEC
T ss_pred CCCCCCcCCCCcEEecCCc-----------------cCCCCCEEEECCCCCcCCccCcCc
Confidence 6788999999999986210 012458999999999999998543
No 6
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.62 E-value=1.4e-08 Score=66.84 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 156 DNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 156 ~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
.++|.. +||.| |+|+... ..++|.|.||+||+|++|++.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~--------------------~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLV--------------------DMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEET--------------------TTTEEEEEECTTCSSTTSCCC
T ss_pred cccCCCCCCCCCCC-CEeeccC--------------------CCCCEEEECCCCCccCCCCcc
Confidence 357877 99999 7998631 135799999999999999864
No 7
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.51 E-value=2.4e-08 Score=67.58 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=28.7
Q ss_pred CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
.+||.|||+|+... ...+|.|.||+||+|++|.+.
T Consensus 11 ~~pC~nGG~C~~~~--------------------~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIE--------------------ALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEET--------------------TTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeec--------------------CCCCEEEecCCCCcCCCCCcC
Confidence 68999999998310 145799999999999999865
No 8
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.43 E-value=2.5e-08 Score=69.58 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=33.1
Q ss_pred CCCCCCCCCCCCC--cEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC-CCCccc
Q psy2064 155 DDNLCVQEPCLNY--EQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY-DGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ng--g~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~-G~~~~~ 214 (221)
..+.|..+||.|| |+|++. ..+|.|.||+||+ |..|..
T Consensus 10 ~~d~C~snPC~nga~gtC~~~----------------------~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKET----------------------NSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEEC----------------------SSEEEEECCTTEEEEECSSS
T ss_pred CCCcCcCCCCcCCCccccccC----------------------CCceEeECCCCCccCCCCCC
Confidence 3578999999999 999986 4589999999999 999863
No 9
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.43 E-value=1.3e-07 Score=69.99 Aligned_cols=44 Identities=27% Similarity=0.446 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTS 218 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~~ 218 (221)
..+.|..+||.|||+|+... ...+|.|.||+||+|++|.++.++
T Consensus 47 ~~~~C~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 47 PVKSCSEPRCFNGGTCQQAL--------------------YFSDFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp CEEECSSCCSCTTCEEEEES--------------------SSSCEEEECCTTCBSSSCCBCSSC
T ss_pred cCCcccCCCCCCCCEeecCC--------------------CCCCeEeECCCCCcCCcCCcCCCC
Confidence 34789999999999999752 125899999999999999876543
No 10
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.32 E-value=1e-07 Score=63.81 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=28.3
Q ss_pred CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
.+||+|||+|+.... ....+|.|.||+||+|++|+..
T Consensus 13 ~~pC~NGGtC~~~~~------------------~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKI------------------ADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HHTSCTTCEEEEEEE------------------TTEEEEEEECCTTEESTTSCEE
T ss_pred CCcCCCCCEEecCcc------------------CCCCCEEEECCCCCcCCCCccc
Confidence 569999999986310 0124799999999999999854
No 11
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=98.31 E-value=1e-07 Score=65.63 Aligned_cols=41 Identities=20% Similarity=0.334 Sum_probs=30.0
Q ss_pred CCCCCC----CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQE----PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~----PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
-.|..+ ||.|||+|+.... .....|.|.||+||+|++|++.
T Consensus 5 ~~C~~~~~~~pC~NGGtC~~~~~------------------~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 5 YKCPETFDAWYCLNDAHCFAVKI------------------ADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp BCCCHHHHHHTSCSSCEEEEEEE------------------TTEEEEEEEECTTEESSSSCEE
T ss_pred ccCCccccCCcCCCCCEEeCCcc------------------CCCCCEEeECCCCCccCCCccc
Confidence 356544 9999999984200 0134789999999999999865
No 12
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.99 E-value=2.8e-06 Score=67.82 Aligned_cols=38 Identities=24% Similarity=0.503 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.+.|..+||.|+++|+.. ..+|.|.||+||+|..|..
T Consensus 47 dideC~~~pC~n~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~ 84 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDD----------------------INSYECWCQVGFEGKNCEL 84 (146)
T ss_dssp ---CCSSCSSCTTCEEEEC----------------------SSCEEEECCSSEESTTTCE
T ss_pred CcCcCCCCCCCCCCEeECC----------------------CCCEEEecCCCCcCCcCCC
Confidence 5688999999999999875 3589999999999999974
No 13
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.96 E-value=2.2e-06 Score=68.08 Aligned_cols=37 Identities=16% Similarity=0.470 Sum_probs=33.1
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..|..+||.++|+|++. ...|.|+||+||+|..|++.
T Consensus 120 ~~c~~~~C~~~g~C~~~----------------------~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLET----------------------IGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCCTTGGGGSEEEEEC----------------------SSSEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCEEecC----------------------CCCceEeCCCCCcCcccccC
Confidence 57999999999999986 45899999999999999964
No 14
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.95 E-value=3e-06 Score=67.03 Aligned_cols=38 Identities=21% Similarity=0.474 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.+.|..+||.|+|+|+.. ..+|.|.||+||+|..|..
T Consensus 46 did~C~~~pC~n~g~C~~~----------------------~g~y~C~C~~G~~G~~C~~ 83 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQ----------------------LQSYICFCLPAFEGRNCET 83 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEE----------------------TTEEEEECCTTEESTTSCE
T ss_pred ccCcCcCCCcCCCCEEeCC----------------------CCCEEeeCCCCccCCcccc
Confidence 5688999999999999876 3589999999999999974
No 15
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=97.91 E-value=3.7e-06 Score=61.53 Aligned_cols=40 Identities=15% Similarity=0.357 Sum_probs=30.1
Q ss_pred CCCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064 156 DNLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT 216 (221)
Q Consensus 156 ~~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~ 216 (221)
.++|. .++|.|| +|.-.. ....+.|.|++||+|+||++++
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~--------------------~~~~~~C~C~~GYtG~RCE~l~ 79 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVK--------------------ELRAPSCICHPGYHGERCHGLS 79 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBG--------------------GGTBCCEEECTTEESTTCCEEC
T ss_pred CCCCCccccCcCCCC-Eeeeec--------------------CCCCeEEEcCCCcccccccccC
Confidence 46887 8999998 896421 1346899999999999998753
No 16
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.89 E-value=1.6e-05 Score=61.91 Aligned_cols=39 Identities=26% Similarity=0.669 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..+.|..+||.|+++|+.. ..+|.|+||+||+|++|.++
T Consensus 82 ~~~~C~~~~C~~~g~C~~~----------------------~g~~~C~C~~G~~G~~C~~~ 120 (135)
T 2vj3_A 82 NTDECASSPCLHNGRCLDK----------------------INEFQCECPTGFTGHLCQVD 120 (135)
T ss_dssp ECCTTTTCCSTTTCEEEEC----------------------SSCEEEECCTTEESSSSCEE
T ss_pred cCCcccCCCcCCCCEeECC----------------------CCCeEEECCCCCcCCccCcc
Confidence 4578999999999999875 35799999999999999754
No 17
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=97.85 E-value=8.1e-06 Score=74.14 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=35.1
Q ss_pred cCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCC-CCCCCCcccc
Q psy2064 152 LPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPD-KFYDGLDSIL 215 (221)
Q Consensus 152 ~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~-Gf~G~~~~~~ 215 (221)
|+...+.|..+||.|+|+|++. ..+|.|.||. ||+|+.|+..
T Consensus 181 C~~~~~~C~~~pC~n~g~C~~~----------------------~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 181 CEGPSTTCQEDSCSNQGVCLQQ----------------------WDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCCSSCCCTTSSSTTCEEEEC----------------------SSSEEEECTTTSEESTTSCEE
T ss_pred CCCCCCCcccccCCCCCEecCC----------------------CCCceEeccCCcccCCCCCCC
Confidence 4445678999999999999975 3589999996 9999999843
No 18
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.81 E-value=7.7e-06 Score=62.27 Aligned_cols=38 Identities=18% Similarity=0.494 Sum_probs=30.5
Q ss_pred CCCCCCCCC--------CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEP--------CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~P--------C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.+.|..+| |.|+++|+.. ..+|.|.||+||+|..|..
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~ 50 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDG----------------------IGSFSCDCRSGWEGRFCQR 50 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCC----------------------SSCCCEEECTTEESTTSCE
T ss_pred ecccccCCCccccccccCCCcCCCCCC----------------------CCCcEeeCCCCCcCCCcCc
Confidence 346788888 9999999875 3589999999999999884
No 19
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.77 E-value=3.4e-06 Score=71.05 Aligned_cols=38 Identities=21% Similarity=0.522 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
..+.|..+||.|+|+|+.. ..+|.|.||+||+|..|..
T Consensus 41 dideC~~~pC~ngg~C~n~----------------------~g~y~C~C~~Gf~G~~Ce~ 78 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDG----------------------LGEYTCTCLEGFEGKNCEL 78 (195)
T ss_dssp ------------------------------------------------------------
T ss_pred CCcccCCCCCCCCCEeECC----------------------CCCeeEeCCCCceeccccc
Confidence 5689999999999999875 3589999999999999974
No 20
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.74 E-value=4.1e-06 Score=65.70 Aligned_cols=38 Identities=21% Similarity=0.522 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
..+.|..+||.|+++|+.. ..+|.|.||+||+|..|..
T Consensus 41 d~d~C~~~pC~n~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~ 78 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDG----------------------LGEYTCTCLEGFEGKNCEL 78 (134)
T ss_dssp ------------------------------------------------------------
T ss_pred CcCcCCCCCCCCcCCcccC----------------------CCCEEeeCCCCccCCcccc
Confidence 4578999999999999875 3579999999999999974
No 21
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.73 E-value=2.1e-05 Score=61.14 Aligned_cols=39 Identities=28% Similarity=0.548 Sum_probs=34.2
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..+.|..+||.|+++|+.. ..+|.|+||+||+|+++...
T Consensus 96 ~i~~C~~~~C~~~~~C~~~----------------------~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 96 NINECEVEPCKNGGICTDL----------------------VANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp ECCTTTTCCSCTTCEEEEE----------------------TTEEEEECCTTCBSTTSCBC
T ss_pred CCCcCCCCCCCCCCEeECC----------------------CCCeEeECCCCCccCCceec
Confidence 4578999999999999875 45899999999999999854
No 22
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.72 E-value=2.1e-05 Score=61.26 Aligned_cols=36 Identities=17% Similarity=0.484 Sum_probs=23.9
Q ss_pred CCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 156 DNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 156 ~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
.+.|. .+||.|+++|+.. ..+|.|+||+||+|++|.
T Consensus 5 ideC~~~~~~C~~~g~C~~~----------------------~g~~~C~C~~Gy~G~~C~ 42 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINT----------------------LGSFECQCLQGYTGPRCE 42 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEEC----------------------SSSEEEECCTTEESTTSC
T ss_pred cccccCCCCCCCCCCEeECC----------------------CCCEEEECCCCCcCCccc
Confidence 45666 5777777777764 235677777777777665
No 23
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.65 E-value=2.6e-05 Score=52.19 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=26.6
Q ss_pred CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
++.|.|| +|.-.. ..+.+.|.||+||+|+||..
T Consensus 13 ~~yC~nG-~C~~~~--------------------~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHG-TCRFLV--------------------QEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCC-EEeecc--------------------CCCCeEEECCCCCcccCCCc
Confidence 6899998 997531 13578999999999999984
No 24
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.62 E-value=3.4e-05 Score=64.81 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
..|. .+|.|||.|+. ...|+||+||+|++|+.
T Consensus 149 ~~C~-~~C~ngG~Cv~-------------------------P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECP-GGCRNGGFCNE-------------------------RRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCT-TCCCTTCEECT-------------------------TSCEECCTTCBTTTTCB
T ss_pred CccC-CCCCCCCEeCC-------------------------CCcccCcCCCCCCCCcC
Confidence 5775 79999999986 34799999999999985
No 25
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.62 E-value=3.5e-05 Score=59.84 Aligned_cols=44 Identities=18% Similarity=0.355 Sum_probs=32.8
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
..+.|..+||.|+++|+....+.. ....+|.|+||+||+|.+|.
T Consensus 51 ~~~~C~~~~C~~~g~C~~~~~~~~---------------~~~~~~~C~C~~G~~G~~C~ 94 (143)
T 4d90_A 51 SAGPCTPNPCHNGGTCEISEAYRG---------------DTFIGYVCKCPRGFNGIHCQ 94 (143)
T ss_dssp CCCTTSSCCCCTTCEEEECCCEET---------------TEECCEEEECCTTEESTTSC
T ss_pred cCCcCCCCCCCCCCEecCCCcccc---------------CCCCCeEeECcCCCcCCCcc
Confidence 457899999999999985311000 01358999999999999996
No 26
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=97.59 E-value=1.7e-05 Score=62.35 Aligned_cols=37 Identities=16% Similarity=0.425 Sum_probs=32.8
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..|..+||+++|.|.+. ...|.|.|++||+|++|++.
T Consensus 120 ~~~~~~pc~~~g~C~~~----------------------~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNTSCSGHGECVET----------------------INNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTTGGGGSEEEEEE----------------------TTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCCCEeecC----------------------CCCeeEECCCCccCcccccc
Confidence 67888999999999986 35899999999999999864
No 27
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.59 E-value=6.3e-05 Score=54.02 Aligned_cols=70 Identities=30% Similarity=0.612 Sum_probs=43.7
Q ss_pred eccccccceeeecCCcc----ceeeecccceeecCcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceee
Q psy2064 116 SIDECDTELVVRHGSTL----GTFCANTSSYVLDSKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLF 190 (221)
Q Consensus 116 ~~deC~~~~~~~~~s~~----~~~~~~~~s~v~~~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f 190 (221)
.+|||.....+.++.+. +..|.-...|.++++.+. ..+.|. .+||.|+ +|+..
T Consensus 4 dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~----dideC~~~~~C~~~-~C~n~----------------- 61 (82)
T 1emn_A 4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV----DTDECSVGNPCGNG-TCKNV----------------- 61 (82)
T ss_dssp CCCSSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEE----ECCGGGTCCTTSSS-CEEEC-----------------
T ss_pred ccccCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccC----CcccccCCCCCCCC-EeECC-----------------
Confidence 46777642222222222 234444455555444442 347886 8999985 99875
Q ss_pred eccCCCCcceeeCCCCCCCCCc
Q psy2064 191 RPIYPVSTFACVHPDKFYDGLD 212 (221)
Q Consensus 191 ~~~~~~~~y~C~CP~Gf~G~~~ 212 (221)
..+|.|.||+||+|...
T Consensus 62 -----~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 62 -----IGGFECTCEEGFEPGPM 78 (82)
T ss_dssp -----SSSEEECCSSSSCCCSS
T ss_pred -----CCCEEeECCCCeEeCCC
Confidence 45899999999999765
No 28
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=97.55 E-value=5.4e-05 Score=50.61 Aligned_cols=37 Identities=16% Similarity=0.419 Sum_probs=28.3
Q ss_pred CCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 157 NLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 157 ~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
++|. ++.|.|| +|.-.. ....+.|.||.||+|+||..
T Consensus 10 ~~C~~~~~~yC~nG-~C~~i~--------------------~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 10 NPCNAEFQNFCIHG-ECKYIE--------------------HLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CTTTTTGGGTCSSS-EEEEET--------------------TTTEEEEECCSSCCSSSCCC
T ss_pred cccCchhhCcCCCC-EEEEec--------------------CCCCeeEECCCCcccccccc
Confidence 5776 5899996 997321 13467999999999999974
No 29
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=97.50 E-value=4.7e-05 Score=61.14 Aligned_cols=35 Identities=31% Similarity=0.402 Sum_probs=28.1
Q ss_pred CCCCCcEEccceeccCCCccccccceeeeccCCCCcc-eeeCCCCCCCCCcccccc
Q psy2064 163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTF-ACVHPDKFYDGLDSILTT 217 (221)
Q Consensus 163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y-~C~CP~Gf~G~~~~~~~~ 217 (221)
||+|||+|+.... ..+| .|.||+||.|++|.|+.+
T Consensus 14 pC~NGGtC~~~~~--------------------~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 14 DCLNGGTCVSNKY--------------------FSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp CCCTTCEEEECSS--------------------STTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCCCcCCCcc--------------------ccCCccccCCCCCCCCceecccc
Confidence 9999999976421 2356 899999999999998743
No 30
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.49 E-value=4.1e-05 Score=59.56 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=26.8
Q ss_pred CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064 163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT 216 (221)
Q Consensus 163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~ 216 (221)
||.|||+|++.+.| ..-+.|.||+||+|..|++..
T Consensus 2 pC~nggtC~~~~~~-------------------~~~~~C~Cp~g~~G~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCVSNKYF-------------------SNIHWCNCPKKFGGQHCEIDK 36 (122)
T ss_dssp CCCSSCEEEECTTT-------------------TTCEEEECCTTEESTTSCEES
T ss_pred CCCCcCCcCCCccc-------------------CCCCCccCCCCCCCccccccC
Confidence 89999999875211 111299999999999999764
No 31
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=97.43 E-value=4.1e-05 Score=51.09 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=26.4
Q ss_pred CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
++.|.| |+|.-.. ....+.|+||+||+|+||+..
T Consensus 13 ~~yC~n-G~C~~~~--------------------~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVV--------------------AEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEET--------------------TTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEc--------------------CCCCeEEECCCCcccCCCCee
Confidence 689999 6896321 134679999999999999854
No 32
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=97.41 E-value=8.7e-05 Score=76.64 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=35.2
Q ss_pred cCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcccc
Q psy2064 152 LPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSIL 215 (221)
Q Consensus 152 ~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~~ 215 (221)
|+...+.|..+||.|||+|++. ..+|.|.|| +||+|+.|+..
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~----------------------~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQ----------------------WDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEE----------------------TTEEEEECTTSSCBSTTSCBC
T ss_pred eecccCceECCcCCCCCEeCCC----------------------CCCCEEECCCCCCCCCCccCC
Confidence 4445578999999999999985 348999999 69999999854
No 33
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=97.24 E-value=0.00017 Score=57.05 Aligned_cols=37 Identities=16% Similarity=0.478 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
.+|..+||.++|+|++. ...|.|.|++||+|..|...
T Consensus 120 ~~~~~~~C~~~g~C~~~----------------------~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEI----------------------INNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCCCTTSSCSSEEEEEE----------------------TTEEEEEECTTCBSSSSCBC
T ss_pred CCCCCCcCCCCCeeccc----------------------CCCceeeeCCCccccccccc
Confidence 46888999999999986 35899999999999999854
No 34
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.14 E-value=0.00021 Score=51.20 Aligned_cols=36 Identities=19% Similarity=0.490 Sum_probs=29.5
Q ss_pred CCCCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC--CCCcc
Q psy2064 155 DDNLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY--DGLDS 213 (221)
Q Consensus 155 ~~~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~--G~~~~ 213 (221)
+.+.|.. +||.| ++|+.. ..+|.|.||+||+ |..|.
T Consensus 4 dideC~~~~~C~~-g~C~n~----------------------~g~y~C~C~~Gy~~~g~~C~ 42 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINT----------------------DGSYRCECPFGYILAGNECV 42 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCC----------------------SSCCCEECCTTEEEETTEEE
T ss_pred ccccCCCCCCcCC-CEEEec----------------------CCCEEEECCCCeECCCCccC
Confidence 4578975 99998 799875 3589999999997 88775
No 35
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.07 E-value=0.00018 Score=52.05 Aligned_cols=35 Identities=20% Similarity=0.542 Sum_probs=27.2
Q ss_pred CCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064 156 DNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS 213 (221)
Q Consensus 156 ~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~ 213 (221)
.+.|..+| | ++++|+.. ..+|.|.||+||+ |..|.
T Consensus 3 ideC~~~~~~C-~~~~C~n~----------------------~g~y~C~C~~G~~~~~~g~~C~ 43 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNI----------------------PGDFECECPEGYRYNLKSKSCE 43 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCB----------------------TTBCCCSSSTTCEEETTTTEEE
T ss_pred cccccCCCCCC-CCCEeECC----------------------CCCEEEECCCCceECCCCCcCC
Confidence 47888777 8 88999875 3578999999998 66664
No 36
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=96.96 E-value=2.5e-05 Score=68.89 Aligned_cols=38 Identities=16% Similarity=0.032 Sum_probs=32.6
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT 216 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~ 216 (221)
..|.++||.|+|+|++. ..+|+|+||.||+|++|.+..
T Consensus 100 ~eC~s~pC~ngG~C~~~----------------------~~sy~C~C~~Gf~G~~Ce~~~ 137 (267)
T 4fbr_A 100 IVAVSIKSNDGGKTLTG----------------------TTTYNGEGPIGFKSEVTDGDT 137 (267)
T ss_dssp EEEEEEECSSTTSEEEE----------------------EEEETTSCCEEEEEEECCCCE
T ss_pred cccCCCCCCCCCEEecC----------------------CccEEeeCCCCccccCCCCCc
Confidence 47889999999999886 358999999999999998653
No 37
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=96.93 E-value=0.00033 Score=72.33 Aligned_cols=38 Identities=16% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcccc
Q psy2064 156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSIL 215 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~~ 215 (221)
.+.|.++||.|+|+|++. ..+|.|.|| .||+|+.|+..
T Consensus 619 ~~~C~~~pC~ngg~C~~~----------------------~~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDG----------------------WNRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp SCGGGSCCCCTTCEEEEC----------------------SSSEEEECTTTTEESTTSCEE
T ss_pred CCCCCccCCCCCCEEeCC----------------------CCCeEEECCCCCcccccCccc
Confidence 478999999999999975 358999999 79999999753
No 38
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=96.93 E-value=0.0003 Score=56.90 Aligned_cols=37 Identities=27% Similarity=0.604 Sum_probs=29.5
Q ss_pred CCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 157 NLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 157 ~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.|.. +||.|+++|+.. ...+|.|+||+||+|++|++
T Consensus 132 ~~C~~~~~C~~~g~C~~~---------------------~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 132 NYCGTHQPCLNGGTCSNT---------------------GPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp CHHHHTCCCCTTCEEEEC---------------------STTCEEEECCTTCCSTTSCC
T ss_pred CCCCCCCCCCCCCEEcCC---------------------CCCCcEeECCCCCcCcCcCC
Confidence 45653 899999999864 13579999999999999864
No 39
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.90 E-value=0.00037 Score=50.22 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=27.7
Q ss_pred CCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC-----CCCcc
Q psy2064 156 DNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY-----DGLDS 213 (221)
Q Consensus 156 ~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~-----G~~~~ 213 (221)
.+.|..+| |.|+ +|+.. ..+|.|.||+||+ |..|.
T Consensus 3 ideC~~~~~~C~~g-~C~n~----------------------~g~y~C~C~~Gy~~~~~~g~~C~ 44 (86)
T 1lmj_A 3 IDECRISPDLCGRG-QCVNT----------------------PGDFECKCDEGYESGFMMMKNCM 44 (86)
T ss_dssp CCTTTTCSSTTTTS-CEEEE----------------------TTEEEECCCSSEEECTTTSSSEE
T ss_pred cccccCCCCCCCCC-EEECC----------------------CCCEEeeCCCCcCccCCCCCccC
Confidence 47887766 9876 99876 4589999999998 66664
No 40
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.88 E-value=0.00028 Score=57.37 Aligned_cols=39 Identities=10% Similarity=0.261 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC-----CCcc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD-----GLDS 213 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G-----~~~~ 213 (221)
+.|..+||.|+++|+..-. ....+|.|.||+||+| ..|.
T Consensus 92 d~C~~~~C~~~g~C~~~~~------------------~~~g~~~C~C~~Gy~g~~~~~~~C~ 135 (186)
T 1z1y_A 92 DVCQYXNCGESGECIVEYL------------------SEIQSAGCSCAIGXVPNPEDEXXCT 135 (186)
T ss_dssp GGGTTCCCCTTEEEEEEEE------------------TTEEEEEEEECTEEEEETTTTTEEE
T ss_pred CcCcCCCCCCCCEEeeCCc------------------CCCCCceEECCCCCcccCCCCCcce
Confidence 7899999999999983210 0134799999999998 6665
No 41
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=96.86 E-value=0.0005 Score=67.04 Aligned_cols=37 Identities=24% Similarity=0.644 Sum_probs=31.8
Q ss_pred CCCCCCCCC--CCCCc---EEccceeccCCCccccccceeeeccCCCCcceee-CCCCCCCCCcc
Q psy2064 155 DDNLCVQEP--CLNYE---QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACV-HPDKFYDGLDS 213 (221)
Q Consensus 155 ~~~~C~~~P--C~ngg---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~-CP~Gf~G~~~~ 213 (221)
..+.|..+| |.+++ +|+.. ..+|+|. ||+||+|..|.
T Consensus 43 DiDEC~~~p~~C~~gg~~~~CvNt----------------------~gsY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 43 DLDECALVPDICFSTSKVPRCVNT----------------------QPGFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp BCCTTTTSCCCSCCCSSSCCEEEC----------------------SSSEEECCCCTTEEECCCE
T ss_pred ccccccCCCCcccCCccccceeec----------------------cCceecccCCCCcccCccc
Confidence 458899888 99999 99875 4589999 99999999865
No 42
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.81 E-value=0.00066 Score=55.18 Aligned_cols=56 Identities=18% Similarity=0.366 Sum_probs=38.8
Q ss_pred eeecccceee---cCcceeecCCCCCCCCCCCC-CCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064 135 FCANTSSYVL---DSKEVEVLPFDDNLCVQEPC-LNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG 210 (221)
Q Consensus 135 ~~~~~~s~v~---~~~~~~v~p~~~~~C~~~PC-~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~ 210 (221)
.|.-...|.. +...+.. ...+.|. +|| .++++|+.. ..+|+|.||+||+|.
T Consensus 117 ~C~C~~Gy~g~~~~~~~C~~--~~~~~C~-~~C~~~~~~C~n~----------------------~g~y~C~C~~G~~g~ 171 (186)
T 1z1y_A 117 GCSCAIGXVPNPEDEXXCTX--TGETACQ-LXCNTDNEVCXNV----------------------EGVYXCQCMEGFTFD 171 (186)
T ss_dssp EEEECTEEEEETTTTTEEEE--EECCCCC-CCCCTTTEEEEEE----------------------TTEEEEEECTTCEEE
T ss_pred eEECCCCCcccCCCCCcceE--cCCCccc-ccccccCcceecC----------------------CCCeeeECCCCCccC
Confidence 3444445555 2244432 1236787 499 999999875 458999999999999
Q ss_pred Ccccc
Q psy2064 211 LDSIL 215 (221)
Q Consensus 211 ~~~~~ 215 (221)
.+...
T Consensus 172 ~~~~~ 176 (186)
T 1z1y_A 172 XEXNV 176 (186)
T ss_dssp TTTTE
T ss_pred ccccc
Confidence 88754
No 43
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.65 E-value=0.00063 Score=53.01 Aligned_cols=41 Identities=17% Similarity=0.324 Sum_probs=33.1
Q ss_pred CCCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064 155 DDNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT 217 (221)
Q Consensus 155 ~~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~ 217 (221)
..+.|. .+||.++++|+.. ..+|.|.||+||+|..+.-.|.
T Consensus 95 dideC~~~~~~C~~~~~C~n~----------------------~g~y~C~C~~Gy~g~~~~~~C~ 137 (143)
T 2bou_A 95 DVDECSSGQHQCDSSTVCFNT----------------------VGSYSCRCRPGWKPRHGIPNNQ 137 (143)
T ss_dssp ECCHHHHTCCCCCTTSEEEEC----------------------SSCEEEECCSSSCBCTTCCSSB
T ss_pred CccCccCcCCCCCCCCEEECC----------------------CCCEEeeCCCCcccCCCCccCc
Confidence 346776 4899999999875 4689999999999998875543
No 44
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.48 E-value=0.0021 Score=41.79 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=14.4
Q ss_pred CCcceeeCCCCCCCCCcc
Q psy2064 196 VSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 196 ~~~y~C~CP~Gf~G~~~~ 213 (221)
..+|.|.||+||+|....
T Consensus 30 ~Gsy~C~C~~Gy~~~~d~ 47 (53)
T 1apq_A 30 VGGYFCSCRPGYELQEDR 47 (53)
T ss_dssp TTEEEEECSTTCEECTTS
T ss_pred CCCeEEECCCCCeECCCC
Confidence 468999999999875443
No 45
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.27 E-value=0.0012 Score=51.37 Aligned_cols=36 Identities=19% Similarity=0.446 Sum_probs=28.9
Q ss_pred CCCCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064 155 DDNLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD 212 (221)
Q Consensus 155 ~~~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~ 212 (221)
..+.|... ||.++++|+.. ..+|.|.||+||+|..+
T Consensus 43 dideC~~~~~~~C~~~~~C~n~----------------------~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 43 DINECATLSKVSCGKFSDCWNT----------------------EGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp ECCGGGC----CCCTTEEEEEC----------------------SSCEEEEECTTEEETTC
T ss_pred ccccccCCCCCCCCCCCEEEcC----------------------CCCeEeECCCCcccCcC
Confidence 34788764 99999999875 35899999999999744
No 46
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.17 E-value=0.0016 Score=46.80 Aligned_cols=36 Identities=19% Similarity=0.431 Sum_probs=27.8
Q ss_pred CCCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 155 DDNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 155 ~~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
+.+.|..+| |. +++|+.+ ..+|.|.||+||+|....
T Consensus 45 dideC~~~~~~C~-~~~C~n~----------------------~g~y~C~C~~G~~~~~~~ 82 (86)
T 1lmj_A 45 DIDECQRDPLLCR-GGVCHNT----------------------EGSYRCECPPGHQLSPNI 82 (86)
T ss_dssp ECCHHHHCSSTTT-TSEEEEE----------------------TTEEEEESCTTSCCCSSS
T ss_pred CcccccCCCCcCC-CCEeEcC----------------------CCCEEEECcCCcccCCCC
Confidence 457887777 65 5799976 468999999999986543
No 47
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.13 E-value=0.0015 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL 211 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~ 211 (221)
+.+.|..+||.+ +|+.. ...+|.|.||+||+|..
T Consensus 3 dideC~~~pC~~--~C~~~---------------------~~g~y~C~C~~Gy~g~~ 36 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPL---------------------DQTSYLCVCAEGFAPIP 36 (118)
T ss_dssp CCCGGGGCCCSS--EEEEC---------------------SSSCEEEECCTTEEEET
T ss_pred ccccCCCCCCCC--CCCCC---------------------CCCCEEeECCCCccccC
Confidence 347788888885 88764 02367777777777764
No 48
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.11 E-value=0.0049 Score=53.59 Aligned_cols=36 Identities=19% Similarity=0.510 Sum_probs=27.7
Q ss_pred CCCCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 154 FDDNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 154 ~~~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
.+.+.|.. +||.| .|+.. ..+|.|.||+||+|....
T Consensus 41 ~~~~eC~~~~~~~C~~--~C~~~----------------------~g~~~C~C~~g~~~~~~~ 79 (317)
T 3h5c_B 41 LAKNECHPERTDGCQH--FCLPG----------------------QESYTCSCAQGYRLGEDH 79 (317)
T ss_dssp CCSSSCCTTCTTSCSS--EEECC----------------------SSSCEEECCTTEECCTTS
T ss_pred cCcccCCCCCCCCCcC--ccccC----------------------CCeeEEeccccccccccc
Confidence 35678876 89998 89875 458999999999886543
No 49
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.11 E-value=0.0015 Score=51.07 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=28.1
Q ss_pred CCCCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 155 DDNLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 155 ~~~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
..+.|..+ +|.|+ +|+.. ..+|.|.||+||+|....
T Consensus 106 dideC~~~~~~C~~g-~C~n~----------------------~g~y~C~C~~Gy~g~~~~ 143 (147)
T 2w86_A 106 DIDECEVFPGVCKNG-LCVNT----------------------RGSFKCQCPSGMTLDATG 143 (147)
T ss_dssp ECCHHHHSTTCSSSS-EEEEE----------------------TTEEEEECCTTCCBCTTS
T ss_pred ccccccCCCCCCCCC-EEECC----------------------CCCEEeeCCCCCccCCCC
Confidence 35778754 49986 99886 468999999999987643
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=96.11 E-value=0.0022 Score=59.35 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=29.5
Q ss_pred CCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064 157 NLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT 217 (221)
Q Consensus 157 ~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~ 217 (221)
+.|.. .||.|+|+|.+. ++.|+||+||+|++|+..|+
T Consensus 196 ~~C~~~C~~C~~~G~C~~~------------------------~g~C~C~~G~~G~~Ce~~C~ 234 (423)
T 2gy5_A 196 PECNHLCTACMNNGVCHED------------------------TGECICPPGFMGRTCEKACE 234 (423)
T ss_dssp TTSCEECCCCCTTCEECTT------------------------TCCEECCTTEESTTSCEECC
T ss_pred CCCCCCCCCCCCCCEEECC------------------------CCcEeCCCCccCCCcccccC
Confidence 45554 399999999753 57899999999999996543
No 51
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.99 E-value=0.0012 Score=61.54 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=1.9
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
+.|.. ||.|+|+|+. .+.|.|++||+|++|+..
T Consensus 424 ~~C~~-~C~~~g~C~~-------------------------~~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 424 AKCEP-ACRHGGVCVR-------------------------PNKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp ECC--------------------------------------------------------
T ss_pred CcCCC-CCCCCCEECC-------------------------CCEEECCCCcccCCCCCC
Confidence 46766 9999999974 258999999999999853
No 52
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=95.65 E-value=0.00039 Score=61.20 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=26.3
Q ss_pred CCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 159 CVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 159 C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
|...||.|+|+|++. ...|.|+||+||+|.+|...
T Consensus 169 c~~~~c~ngg~C~dg----------------------~~~y~C~Cp~Gf~G~~c~~~ 203 (267)
T 4fbr_A 169 NVDAKSNDGGKTLSG----------------------TMTYNGEGPIGFRGTLTSPD 203 (267)
T ss_dssp EEEEECSSTTSEEEE----------------------EEEETTSCCEEEEEEEEETT
T ss_pred cCCCCCCCCCEeeCC----------------------CCCeEEeCCCCccccccccc
Confidence 445667777777664 34899999999999998843
No 53
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.61 E-value=0.0031 Score=50.10 Aligned_cols=37 Identities=24% Similarity=0.620 Sum_probs=28.6
Q ss_pred CCCCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
+.+.|.. +||.| ++|+.. ..+|+|.||+||+|....-
T Consensus 121 dideC~~~~~~C~~-g~C~n~----------------------~gsy~C~C~~Gy~g~~d~~ 159 (162)
T 1uzk_A 121 DIDECQELPGLCQG-GKCINT----------------------FGSFQCRCPTGYYLNEDTR 159 (162)
T ss_dssp ECCHHHHCGGGGBT-SEEEEC----------------------SSCEEEECCTTCCBCTTTC
T ss_pred ccccccCCCCCcCC-CEeEcC----------------------CCCEEeeCCCCccCCCCCC
Confidence 4567864 56998 599976 4689999999999976543
No 54
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.59 E-value=0.0045 Score=46.63 Aligned_cols=51 Identities=20% Similarity=0.457 Sum_probs=7.2
Q ss_pred eeecccceeec-CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064 135 FCANTSSYVLD-SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD 212 (221)
Q Consensus 135 ~~~~~~s~v~~-~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~ 212 (221)
.|.-...|.+. .+.+. +.+.|. .+||. ++|+.. ..+|.|.||+||+|...
T Consensus 51 ~C~C~~Gy~g~~g~~C~----dideC~~~~~C~--~~C~n~----------------------~gsy~C~C~~Gy~~~~d 102 (107)
T 2w2n_E 51 ECLCPDGFQLVAQRRCE----DIDECQDPDTCS--QLCVNL----------------------EGGYKCQCEEGFQLDPH 102 (107)
T ss_dssp EEECCTTCEEETTTEEE----C----------------------------------------------------------
T ss_pred EEECCCCccccCCCccc----cccccCCCCCcC--CeeecC----------------------CCCEEEECCCCceECCC
Confidence 45445555542 22332 457886 48896 699876 45899999999998654
Q ss_pred c
Q psy2064 213 S 213 (221)
Q Consensus 213 ~ 213 (221)
.
T Consensus 103 ~ 103 (107)
T 2w2n_E 103 T 103 (107)
T ss_dssp -
T ss_pred C
Confidence 3
No 55
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.58 E-value=0.0044 Score=46.69 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCC--c---EEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC---CCcc
Q psy2064 155 DDNLCVQEPCLNY--E---QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD---GLDS 213 (221)
Q Consensus 155 ~~~~C~~~PC~ng--g---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G---~~~~ 213 (221)
..+.|..+||.++ + +|+.. ..+|.|.||+||+| ..|.
T Consensus 23 ~~~~Cd~neC~~~~~~C~~~C~n~----------------------~g~y~C~C~~Gy~g~~g~~C~ 67 (107)
T 2w2n_E 23 FQGAMGTNECLDNNGGCSYVCNDL----------------------KIGYECLCPDGFQLVAQRRCE 67 (107)
T ss_dssp CSCCBSCCGGGTGGGGCSSEEECC----------------------SBSCEEECCTTCEEETTTEEE
T ss_pred CCCCCcCccCcCCCCCCCCEeEeC----------------------CCCeEEECCCCccccCCCccc
Confidence 4456777777643 3 78764 35899999999998 5665
No 56
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.50 E-value=0.013 Score=52.81 Aligned_cols=52 Identities=19% Similarity=0.429 Sum_probs=35.9
Q ss_pred eeeecccceeec-CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064 134 TFCANTSSYVLD-SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL 211 (221)
Q Consensus 134 ~~~~~~~s~v~~-~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~ 211 (221)
..|....-|.+. .+.+. +.+.|. ..||.+ .|+.. ..+|.|.|++||++..
T Consensus 21 y~C~C~~G~~~~~~~~C~----dideC~~~~~C~~--~C~n~----------------------~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 21 YECLCPDGFQLVAQRRCE----DIDECQDPDTCSQ--LCVNL----------------------EGGYKCQCEEGFQLDP 72 (400)
T ss_dssp EEEECCTTEEECSSSCEE----ECCCCSTTSSCSS--CCBCC----------------------SSSCBCCCCTTCCCCT
T ss_pred eEEECCCCCCcCCCCccc----CchhhhccCCCCC--ccCCC----------------------ccceeeeccccccccc
Confidence 456666667652 33442 457886 578876 89875 4689999999999875
Q ss_pred cc
Q psy2064 212 DS 213 (221)
Q Consensus 212 ~~ 213 (221)
..
T Consensus 73 ~~ 74 (400)
T 3p5b_L 73 HT 74 (400)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 57
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=95.06 E-value=0.01 Score=52.87 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=11.5
Q ss_pred CCCCCCCCCCCcEEcc
Q psy2064 157 NLCVQEPCLNYEQCVT 172 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~ 172 (221)
..| ++||.|+|+|..
T Consensus 149 ~~C-~~~C~~~G~C~~ 163 (324)
T 2ygq_A 149 AEC-PGGCRNGGFCNE 163 (324)
T ss_dssp CCC-SSCCCSSCEECT
T ss_pred CCC-CCCCCCCCEECC
Confidence 456 478999999975
No 58
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.95 E-value=0.0094 Score=42.80 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=28.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
..+.|..+||. ++|+.. ..+|.|.|| |+.|-++..
T Consensus 44 dideC~~~~C~--~~C~n~----------------------~g~y~C~C~-g~~G~~~~~ 78 (87)
T 1z6c_A 44 DIDECSENMCA--QLCVNY----------------------PGGYTCYCD-GKKGFKLAQ 78 (87)
T ss_dssp CCCHHHHSCCS--SEECCC----------------------SSSCCEECC-SSSCCBCCT
T ss_pred CcCeeCCCCCC--CEEEcc----------------------CCCEEEECC-CCcCCcccC
Confidence 45788889997 699875 458999999 888877654
No 59
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=94.94 E-value=0.011 Score=57.76 Aligned_cols=41 Identities=12% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCCCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC--CCcc
Q psy2064 155 DDNLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD--GLDS 213 (221)
Q Consensus 155 ~~~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G--~~~~ 213 (221)
..+.|.. +||.++++|+.... ....+|.|+||+||+| ..|.
T Consensus 101 dideC~~~~~pC~~~~~Cvnt~~------------------~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 101 PENPCKDKTHNCHKHAECIYLGH------------------FSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp ECCTTTTTCCCCCTTEEEEECCT------------------TCSSSEEEEECTTEEESSSSEE
T ss_pred ccccccCCCcccccCcccccccc------------------ccccceeeeccCCccccCcccc
Confidence 3578874 69999999987520 1136899999999998 6775
No 60
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=94.84 E-value=0.016 Score=43.53 Aligned_cols=16 Identities=19% Similarity=0.123 Sum_probs=13.1
Q ss_pred CCcceeeCCCCCCCCC
Q psy2064 196 VSTFACVHPDKFYDGL 211 (221)
Q Consensus 196 ~~~y~C~CP~Gf~G~~ 211 (221)
..+|.|.||+||+|..
T Consensus 72 ~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 72 VGWRRCSCAPGYKLGD 87 (114)
T ss_dssp SSSEEEECCTTEEECT
T ss_pred CCCEEeECCCCeeECC
Confidence 4689999999999543
No 61
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=94.83 E-value=0.0057 Score=46.46 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=27.1
Q ss_pred CCCCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064 155 DDNLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD 212 (221)
Q Consensus 155 ~~~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~ 212 (221)
..+.|.. +|| +++|+.. ..+|.|.||+||+|...
T Consensus 79 dideC~~~~~C--~~~C~n~----------------------~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 79 DIDECENGGFC--SGVCHNL----------------------PGTFECICGPDSALAGQ 113 (118)
T ss_dssp ECCHHHHCSSC--SSEEEEC----------------------SSSEEEEECSSSSCEEE
T ss_pred cccccCCCCCC--cCeEEeC----------------------CCCEEEECCCCCccCCC
Confidence 4577876 899 7899875 46899999999998643
No 62
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=94.65 E-value=0.0086 Score=58.86 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcce---eeCCCCCCCCCcccc
Q psy2064 158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFA---CVHPDKFYDGLDSIL 215 (221)
Q Consensus 158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~---C~CP~Gf~G~~~~~~ 215 (221)
.|..+||.|++.|... .+.|. |.|++||+|++|+..
T Consensus 436 ~C~~~pc~n~~~C~~g----------------------~G~~~~G~C~C~~Gy~G~~Ce~~ 474 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNG----------------------NGTFECGVCRCGPGWLGSQCECS 474 (690)
T ss_dssp GGGTTCCTTCTTTTTT----------------------SEEEETTEEEECTTCCSSSSCCS
T ss_pred CCcCCCCCCCCcccCC----------------------CCeEeCCceEeCCCccCCceeec
Confidence 6789999999999853 12455 999999999999754
No 63
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.63 E-value=0.0083 Score=53.57 Aligned_cols=70 Identities=17% Similarity=0.303 Sum_probs=18.6
Q ss_pred eccccccceeeecCCcc---c-eeeecccceeec--CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccce
Q psy2064 116 SIDECDTELVVRHGSTL---G-TFCANTSSYVLD--SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSV 188 (221)
Q Consensus 116 ~~deC~~~~~~~~~s~~---~-~~~~~~~s~v~~--~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~ 188 (221)
.+|||......+...|. | ..|....-|.+. .+.+ .+.+.|. ..||.++ |+.+
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C----~d~~eC~~~~~C~~~--C~~~--------------- 60 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC----QDVNECAEEGYCSQG--CTNS--------------- 60 (386)
T ss_dssp ------------------------------------------------------CCTTE--EC-----------------
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc----CccceeCCcCcccCc--CCCC---------------
Confidence 35677654322222222 1 345555555532 2233 3557885 6899876 9875
Q ss_pred eeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064 189 LFRPIYPVSTFACVHPDKFY----DGLDS 213 (221)
Q Consensus 189 ~f~~~~~~~~y~C~CP~Gf~----G~~~~ 213 (221)
..+|.|.|++||+ |..|.
T Consensus 61 -------~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 61 -------EGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ----------CCEECCTTEEECTTSSCEE
T ss_pred -------CCCCeEEECCCceEcCCCCeEC
Confidence 4589999999998 66664
No 64
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=94.35 E-value=0.02 Score=51.00 Aligned_cols=16 Identities=19% Similarity=0.241 Sum_probs=11.0
Q ss_pred ceeeCCCCCCCCCccc
Q psy2064 199 FACVHPDKFYDGLDSI 214 (221)
Q Consensus 199 y~C~CP~Gf~G~~~~~ 214 (221)
+.|.|++||+|++|.+
T Consensus 229 ~~C~C~~G~~G~~C~~ 244 (324)
T 2ygq_A 229 GKCICPPGLEGEQCEI 244 (324)
T ss_dssp SCBCCCTTCCTTTTC-
T ss_pred CeeeCCCCccCCCCCc
Confidence 5677777777777764
No 65
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=94.12 E-value=0.028 Score=51.90 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=28.4
Q ss_pred CCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064 158 LCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT 217 (221)
Q Consensus 158 ~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~ 217 (221)
.|. ..+|.+++.|.+ .+|.|.|++||+|.+|...|.
T Consensus 245 ~C~~~~~C~~~g~C~~------------------------~~~~C~C~~G~~G~~C~~~C~ 281 (423)
T 2gy5_A 245 RCSGQEGCKSYVFCLP------------------------DPYGCSCATGWKGLQCNEACH 281 (423)
T ss_dssp ECCSTTTTTTCCEEET------------------------TTTEEECCBTCBSGGGCBCCC
T ss_pred cCCCCCCCCCCCEECC------------------------CCCeEEeCCCcccccccCccC
Confidence 454 578999999954 378999999999999987543
No 66
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=93.90 E-value=0.023 Score=44.43 Aligned_cols=35 Identities=9% Similarity=-0.041 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCc---EEccceeccCCCccccccceeeeccCCCC-cceeeCCCCCC----CCCcc
Q psy2064 157 NLCVQEPCLNYE---QCVTVLKFGNASGFVASDSVLFRPIYPVS-TFACVHPDKFY----DGLDS 213 (221)
Q Consensus 157 ~~C~~~PC~ngg---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~-~y~C~CP~Gf~----G~~~~ 213 (221)
+.|...||.|++ +|+.. .. +|.|.||+||+ |..|.
T Consensus 86 ~~c~~c~~~~~~C~~~C~~~----------------------~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 86 DDQLICVNENGGCEQYCSDH----------------------TGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp GGCCSTTTGGGGCSSEEECC----------------------TTSCCEEECCTTEEECTTSSCEE
T ss_pred cccccccCCCCCccCEeECC----------------------CCCCEEEECCCCceECCCCCCCC
Confidence 344445677777 99875 34 89999999999 88876
No 67
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.90 E-value=0.0074 Score=56.24 Aligned_cols=19 Identities=5% Similarity=0.011 Sum_probs=15.5
Q ss_pred ceeeCCCCCCCCCcccc-cc
Q psy2064 199 FACVHPDKFYDGLDSIL-TT 217 (221)
Q Consensus 199 y~C~CP~Gf~G~~~~~~-~~ 217 (221)
+.|+|++||+|+.|.+. |.
T Consensus 408 ~~C~C~~G~~G~~C~~~~C~ 427 (463)
T 2wg3_C 408 GKCCCSPGWEGDFCRTAKCE 427 (463)
T ss_dssp SCEEECTTEESTTSCEECC-
T ss_pred CeECCCCCcCCCcCCcCcCC
Confidence 47999999999999854 54
No 68
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=93.87 E-value=0.027 Score=39.56 Aligned_cols=18 Identities=28% Similarity=0.645 Sum_probs=13.6
Q ss_pred CCCCC--CCCCCCCcEEccc
Q psy2064 156 DNLCV--QEPCLNYEQCVTV 173 (221)
Q Consensus 156 ~~~C~--~~PC~ngg~Cv~~ 173 (221)
.+.|. .++|.++++|+.+
T Consensus 3 idEC~~~~~~C~~~~~C~Nt 22 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINH 22 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEET
T ss_pred cccccCCCCCCCCCCEeECC
Confidence 45675 3679999999876
No 69
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=93.79 E-value=0.045 Score=53.81 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=28.2
Q ss_pred CCCCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeC-CCCCCCCCccc
Q psy2064 154 FDDNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVH-PDKFYDGLDSI 214 (221)
Q Consensus 154 ~~~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~C-P~Gf~G~~~~~ 214 (221)
...+.|.. .||.|+|+|+. ..|.| ++||+|++|+.
T Consensus 562 ~~~~~C~~~~g~~C~~~G~C~~--------------------------g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 562 TRTDTCMSSNGLLCSGRGKCEC--------------------------GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp CCCTTTBCTTSSBTSSSCEEET--------------------------TEEECCSTTCBSTTSCB
T ss_pred CCCCcccCCCCCCCCCCCEEeC--------------------------CEEECCCCCccCCCcCc
Confidence 34567765 78999999953 27999 99999999987
No 70
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=93.39 E-value=0.014 Score=54.37 Aligned_cols=27 Identities=22% Similarity=0.383 Sum_probs=0.0
Q ss_pred CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 162 EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 162 ~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
.||.|||+|.+. . .|+||+||+|..|.
T Consensus 371 ~~C~ngg~C~~~------------------------~-~C~C~~G~~G~~Ce 397 (426)
T 3zyj_B 371 LHCQNGGTCHNN------------------------V-RCLCPAAYTGILCE 397 (426)
T ss_dssp ----------------------------------------------------
T ss_pred ccCCCCCCcCCC------------------------C-CCcCCCCCcCCCCc
Confidence 689999999864 2 89999999999887
No 71
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=93.19 E-value=0.026 Score=47.18 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=26.2
Q ss_pred CCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064 157 NLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS 213 (221)
Q Consensus 157 ~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~ 213 (221)
+.|..+ ||.+ +|+.. .++|.|.||+||+ |..|.
T Consensus 82 deC~~~~~~C~~--~C~n~----------------------~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 82 KLCSLDNGDCDQ--FCHEE----------------------QNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp CGGGTGGGGCSS--EEEEE----------------------TTEEEEECCTTEEECTTSSCEE
T ss_pred ccccCCCCCCCC--EeECC----------------------CCCeEEECCCCceeCCCCCccc
Confidence 668754 5665 99875 4689999999999 88887
No 72
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=92.80 E-value=0.026 Score=45.32 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=14.6
Q ss_pred cceeeCCCCCCCCCccc
Q psy2064 198 TFACVHPDKFYDGLDSI 214 (221)
Q Consensus 198 ~y~C~CP~Gf~G~~~~~ 214 (221)
.|.|+|++||+|+.|..
T Consensus 113 ~~~C~C~~G~~G~~C~~ 129 (169)
T 2vj2_A 113 PWQCLCETNWGGQLCDK 129 (169)
T ss_dssp TTCCEECTTEETTTTCE
T ss_pred CCEEeCCCCCCCCcccC
Confidence 57899999999999874
No 73
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=92.80 E-value=0.033 Score=43.94 Aligned_cols=18 Identities=11% Similarity=0.084 Sum_probs=15.6
Q ss_pred CCcceeeCCCCCC----CCCcc
Q psy2064 196 VSTFACVHPDKFY----DGLDS 213 (221)
Q Consensus 196 ~~~y~C~CP~Gf~----G~~~~ 213 (221)
..+|.|.||+||+ |..|.
T Consensus 104 ~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 104 DSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp SSCCCCBCCTTEEECTTSSSEE
T ss_pred CCCEEeEcCCCcEeCCCCCcCC
Confidence 4689999999999 88776
No 74
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=92.45 E-value=0.039 Score=42.73 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=25.6
Q ss_pred CCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064 157 NLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS 213 (221)
Q Consensus 157 ~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~ 213 (221)
+.|..+ ||.+ +|+.. ..+|.|.||+||+ |..|.
T Consensus 82 d~C~~~~~~C~~--~C~~~----------------------~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 82 KLCSLDNGDCDQ--FCHEE----------------------QNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp CGGGTGGGGCSS--EEEEE----------------------TTEEEEECCTTEEECTTSSCEE
T ss_pred CccccCCCCCCC--EeECC----------------------CCCEEEECCCCcEECCCCCccC
Confidence 567653 4665 89875 3589999999999 88886
No 75
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=92.38 E-value=0.82 Score=34.39 Aligned_cols=77 Identities=12% Similarity=0.131 Sum_probs=60.1
Q ss_pred hhhhHHH-HHHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHHHHHhHHHHHhhhhhh
Q psy2064 16 EAFLSPL-LNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQ 94 (221)
Q Consensus 16 EeFl~~~-~~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~l~~~r~~L~~~~~~~ 94 (221)
.+|++.. =.++++.|+++|+++.....=+||... .|.|=|+..+- =+.+..+..+....|.+|
T Consensus 18 ~~~l~~~~G~~l~~~la~~l~l~~~~F~~isV~g~--------aVTFrV~~N~~-n~taadVA~~a~~~K~~L------- 81 (99)
T 4hti_A 18 RDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLGP--------AVTFKVSANVQ-NVTTEDVEKATVDNKDKL------- 81 (99)
T ss_dssp CSSCCHHHHHHHHHHHHHHTTCCGGGEEEEEEETT--------EEEEEECCCTT-CCCHHHHHHHHHHTHHHH-------
T ss_pred CCCCCHHHHHHHHHHHHHHhCCchhheeeeeecCc--------eEEEEeccCCC-CCCHHHHHHHHHHHHHHH-------
Confidence 4455542 356999999999999888888888832 37788876653 678888888888899999
Q ss_pred HHHhhhhhhhhhhhcceeeeeecc
Q psy2064 95 ERVYLNRGILARLATVQSATLSID 118 (221)
Q Consensus 95 ~~~~~~~~~~e~~lg~~i~~v~~d 118 (221)
|+.+|+.|.+-+++
T Consensus 82 ----------e~~tG~~I~~aGvG 95 (99)
T 4hti_A 82 ----------EETSGLKILQTGVG 95 (99)
T ss_dssp ----------HHHHSSCEEEEEEC
T ss_pred ----------HHhhCeEEEecccc
Confidence 89999999876654
No 76
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=92.01 E-value=0.074 Score=52.27 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=27.0
Q ss_pred CCCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 156 DNLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 156 ~~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
...|... +|.++|+|+. ..|+|++||+|++|+.
T Consensus 557 ~~~C~~~~g~~Cs~~G~C~~--------------------------g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 557 TEGCLNPRRVECSGRGRCRC--------------------------NVCECHSGYQLPLCQE 592 (687)
T ss_dssp SCTTBCTTCSBTSSSCCBCS--------------------------SCBCCSTTCCTTTTCC
T ss_pred CCCCCCCCCCCCCCCCcCCC--------------------------CEEECCCCCcCCCCCC
Confidence 4567654 8999999963 3699999999999996
No 77
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=91.72 E-value=0.049 Score=39.54 Aligned_cols=15 Identities=7% Similarity=-0.232 Sum_probs=12.8
Q ss_pred CcceeeCCCCCCCCCcc
Q psy2064 197 STFACVHPDKFYDGLDS 213 (221)
Q Consensus 197 ~~y~C~CP~Gf~G~~~~ 213 (221)
.+|.|+||+||+ +|+
T Consensus 30 ~~y~C~C~~G~~--~C~ 44 (91)
T 1tpg_A 30 RVEYCWCNSGRA--QCH 44 (91)
T ss_dssp CEEEEECSSSCC--BCC
T ss_pred CCcEeECCCCCc--ccc
Confidence 379999999998 775
No 78
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=91.26 E-value=0.11 Score=52.19 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..++|.-+||+|+++|+.. .....|.|++||.|+.|...
T Consensus 496 e~~~c~C~PC~ngg~~~l~----------------------g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 496 KFDPCQCAPCPNNGRPTLS----------------------GTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp TTCGGGSCCBTTTBEEEEE----------------------TTEEEEECCTTBCSTTSCCB
T ss_pred ccccccCCCCCCCCEeecC----------------------CCceEEEccCCccccCccCc
Confidence 3578877899999999853 34678999999999999864
No 79
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=91.25 E-value=0.038 Score=51.82 Aligned_cols=36 Identities=8% Similarity=-0.065 Sum_probs=0.0
Q ss_pred CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064 158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS 213 (221)
Q Consensus 158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~ 213 (221)
.|...||.|+|.|...-. ..++.|+|++||+|++|+
T Consensus 489 ~C~~C~C~~~gs~~~~C~--------------------~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 489 GCRPCDCDLGGALNNSCS--------------------EDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp --------------------------------------------------------
T ss_pred CCcCCCCCCCCccCCccC--------------------CCCCeeECCCCCcCCCCC
Confidence 456667788877755311 124589999999999985
No 80
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=90.98 E-value=0.083 Score=34.89 Aligned_cols=13 Identities=8% Similarity=0.319 Sum_probs=11.4
Q ss_pred CCcceeeCCCCCC
Q psy2064 196 VSTFACVHPDKFY 208 (221)
Q Consensus 196 ~~~y~C~CP~Gf~ 208 (221)
..+|.|.||+||.
T Consensus 19 ~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 19 QNSVVCSCARGYT 31 (55)
T ss_dssp TTEEEEECCTTEE
T ss_pred CCCeEEeCCCCCE
Confidence 4689999999996
No 81
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.69 E-value=0.14 Score=44.06 Aligned_cols=12 Identities=33% Similarity=0.866 Sum_probs=10.5
Q ss_pred CcceeeCCCCCC
Q psy2064 197 STFACVHPDKFY 208 (221)
Q Consensus 197 ~~y~C~CP~Gf~ 208 (221)
.+|+|.||.||.
T Consensus 295 ~~~~C~C~~g~~ 306 (316)
T 1ijq_A 295 PKFTCACPDGML 306 (316)
T ss_dssp CSEEEECCTTCE
T ss_pred CCeEeeCCCCCE
Confidence 479999999985
No 82
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=90.23 E-value=1.4 Score=32.70 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=55.0
Q ss_pred HHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHHHHHhHHHHHhhhhhhHHHhhhhhh
Q psy2064 24 NFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGI 103 (221)
Q Consensus 24 ~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~l~~~r~~L~~~~~~~~~~~~~~~~ 103 (221)
.++++.||++|+++.....=++|... .|.|=|+..+ .=+....+...+..+|.+|
T Consensus 20 ~~l~~~la~ll~l~~~~Ft~i~V~g~--------aVTFrV~~N~-~n~taadVa~~a~~~k~~L---------------- 74 (91)
T 2qt7_A 20 VKLLEILAEHVHMSSGSFINISVVGP--------ALTFRIRHNE-QNLSLADVTQQAGLVKSEL---------------- 74 (91)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEEEETT--------EEEEEECCCT-TCCCHHHHHHHHHHTHHHH----------------
T ss_pred HHHHHHHHHHhcCCccceeeeEeecc--------eEEEEeccCc-ccCCHHHHHHHHHHhHHHH----------------
Confidence 46889999999999888888888832 4778885554 4678888888888999999
Q ss_pred hhhhhcceeeeeec
Q psy2064 104 LARLATVQSATLSI 117 (221)
Q Consensus 104 ~e~~lg~~i~~v~~ 117 (221)
|+.+|+.|.+-++
T Consensus 75 -e~~~G~~Iv~aGV 87 (91)
T 2qt7_A 75 -EAQTGLQILQTGV 87 (91)
T ss_dssp -HHHHTSCEEEEEE
T ss_pred -HHhhCeEEEeccc
Confidence 8999999977654
No 83
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=89.25 E-value=0.19 Score=39.84 Aligned_cols=31 Identities=23% Similarity=0.507 Sum_probs=23.4
Q ss_pred CCCCCCCCC-----CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC
Q psy2064 155 DDNLCVQEP-----CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD 209 (221)
Q Consensus 155 ~~~~C~~~P-----C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G 209 (221)
..+.|...+ |.+ .|+.. ..+|.|.|++||+.
T Consensus 123 di~eC~~~~~~~~~C~~--~C~n~----------------------~g~~~C~C~~Gy~l 158 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDH--HCHNH----------------------LGGFYCSCRAGYVL 158 (170)
T ss_dssp ECCTTCCCTTSCCSSSS--EEEEE----------------------TTEEEEECCTTEEE
T ss_pred ccCcccCCCCCCCccCC--ccccC----------------------CCCEEEeCCCCcEE
Confidence 446787554 877 69875 45899999999983
No 84
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=89.00 E-value=0.062 Score=42.40 Aligned_cols=9 Identities=11% Similarity=0.128 Sum_probs=3.0
Q ss_pred CCCcEEccc
Q psy2064 165 LNYEQCVTV 173 (221)
Q Consensus 165 ~ngg~Cv~~ 173 (221)
.++++|+..
T Consensus 59 ~~~~~C~~~ 67 (162)
T 1uzk_A 59 NGDTACSNE 67 (162)
T ss_dssp -----CEEE
T ss_pred CCCCcccCC
Confidence 468889875
No 85
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=87.70 E-value=0.16 Score=42.88 Aligned_cols=16 Identities=13% Similarity=0.032 Sum_probs=14.5
Q ss_pred eeeCCCCCCCCCcccc
Q psy2064 200 ACVHPDKFYDGLDSIL 215 (221)
Q Consensus 200 ~C~CP~Gf~G~~~~~~ 215 (221)
.|.|++||+|+.|+..
T Consensus 200 ~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 200 KCRCHPGFEGSACQHH 215 (217)
T ss_dssp EEEECTTEESTTSCEE
T ss_pred eeECCCCCccCCcCCC
Confidence 7999999999999864
No 86
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=84.97 E-value=0.65 Score=45.98 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=24.0
Q ss_pred CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064 155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG 210 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~ 210 (221)
+.+.|. +|++....|+.. ..+|.|.|++||.+.
T Consensus 351 dideC~-~~~~C~~~C~n~----------------------~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 351 DIDECQ-DPDTCSQLCVNL----------------------EGGYKCQCEEGFQLD 383 (791)
T ss_dssp CCCCCS-SSSSCTTTCCBC----------------------SSCBCCCCCSSEECC
T ss_pred cCcccC-CCCCCCCeeecC----------------------CCCceeecCCCCEeC
Confidence 457776 444556689875 468999999999763
No 87
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=84.83 E-value=0.33 Score=40.92 Aligned_cols=28 Identities=18% Similarity=0.342 Sum_probs=24.0
Q ss_pred CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCC------CCCCCccc
Q psy2064 161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDK------FYDGLDSI 214 (221)
Q Consensus 161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~G------f~G~~~~~ 214 (221)
..||.++|+|+. ..|+|++| |+|+.|+.
T Consensus 142 ~~~Csg~G~C~~--------------------------g~C~C~~gw~~~~~~~G~~Ce~ 175 (217)
T 2p28_B 142 SIICSGLGDCVC--------------------------GQCLCHTSDVPGKLIYGQYCEC 175 (217)
T ss_dssp SCBGGGTEEEET--------------------------TEEEECCCCSTTCCEESTTSCE
T ss_pred CCCCCCCCEEeC--------------------------CceECCCCCCCcccEECCCccc
Confidence 578999999974 26999999 79999984
No 88
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=82.24 E-value=0.66 Score=45.92 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=25.0
Q ss_pred CCCCCCCCCCc-----EEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC---CCCcc
Q psy2064 158 LCVQEPCLNYE-----QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY---DGLDS 213 (221)
Q Consensus 158 ~C~~~PC~ngg-----~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~---G~~~~ 213 (221)
.|..++|.++. .|+.. ..+|.|.||+||. |..|.
T Consensus 309 ~C~~~~C~~~~~~C~~~C~~~----------------------~~~y~C~C~~Gy~l~~g~~C~ 350 (791)
T 3m0c_C 309 ECGTNECLDNNGGCSHVCNDL----------------------KIGYECLCPDGFQLVAQRRCE 350 (791)
T ss_dssp TBSCCSTTTGGGGCSSEEEEC----------------------SBSEEEECCTTCEEETTTEEE
T ss_pred ccccccccccccCccccccCC----------------------CCCcccCCCCCCccCCCCccc
Confidence 47777777654 67654 3589999999995 77665
No 89
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.92 E-value=0.51 Score=41.25 Aligned_cols=11 Identities=27% Similarity=0.854 Sum_probs=10.4
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
+|+|.||.||.
T Consensus 324 ~~~C~C~~g~~ 334 (349)
T 3v64_C 324 NYTCACPTGFR 334 (349)
T ss_dssp SCEEECCTTEE
T ss_pred CCeeECCCCCc
Confidence 89999999997
No 90
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.83 E-value=0.97 Score=43.67 Aligned_cols=33 Identities=21% Similarity=0.512 Sum_probs=24.1
Q ss_pred CCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064 155 DDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL 211 (221)
Q Consensus 155 ~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~ 211 (221)
..+.|. ..||. .+|+.+ ..+|.|.|++||++..
T Consensus 333 dideC~~~~~C~--~~C~n~----------------------~g~y~C~C~~G~~~~~ 366 (699)
T 1n7d_A 333 DIDECQDPDTCS--QLCVNL----------------------EGGYKCQCEEGFQLDP 366 (699)
T ss_dssp CCCCCSSSSSCT--TTCCBC----------------------SSCBCCCCCSSCBCCS
T ss_pred CccccCCCCccc--cccccC----------------------CCCeeeeeecccccCC
Confidence 346675 56775 478765 4689999999998743
No 91
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=81.03 E-value=0.48 Score=45.24 Aligned_cols=17 Identities=35% Similarity=0.680 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCCcEEcc
Q psy2064 156 DNLCVQEPCLNYEQCVT 172 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~ 172 (221)
.+.|.++||.|||+|++
T Consensus 2 ~d~C~~~PC~ngG~C~~ 18 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVR 18 (553)
T ss_dssp CCGGGGCCCCTTCEEEE
T ss_pred CCcCCCCCCCCCCCcCC
Confidence 37899999999999987
No 92
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=79.12 E-value=2.1 Score=37.83 Aligned_cols=11 Identities=27% Similarity=0.854 Sum_probs=10.5
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
+|+|.||.||.
T Consensus 367 ~~~C~C~~g~~ 377 (386)
T 3v65_B 367 NYTCACPTGFR 377 (386)
T ss_dssp SCEEECCTTCB
T ss_pred CCeeECCCCCc
Confidence 89999999998
No 93
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=78.98 E-value=1 Score=42.03 Aligned_cols=16 Identities=13% Similarity=-0.130 Sum_probs=14.4
Q ss_pred cceeeCCCCCCCCCcc
Q psy2064 198 TFACVHPDKFYDGLDS 213 (221)
Q Consensus 198 ~y~C~CP~Gf~G~~~~ 213 (221)
++.|.|++||+|++|.
T Consensus 459 tg~C~C~~g~~G~~Ce 474 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCD 474 (525)
T ss_dssp TCCBCBCTTCCSTTTC
T ss_pred CCEEECCCCCcCCCcc
Confidence 5689999999999995
No 94
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=78.68 E-value=0.81 Score=44.11 Aligned_cols=16 Identities=38% Similarity=1.022 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCcEEcc
Q psy2064 157 NLCVQEPCLNYEQCVT 172 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~ 172 (221)
++|.++||.|||+|++
T Consensus 2 d~C~s~PC~ngG~C~~ 17 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMS 17 (587)
T ss_dssp CTTTTCCCCTTCEEEE
T ss_pred CCCCCCCCCCCCEeeC
Confidence 6899999999999995
No 95
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=78.62 E-value=0.85 Score=44.76 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=24.8
Q ss_pred CCCCC----CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC------CCCCCCCccc
Q psy2064 158 LCVQE----PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP------DKFYDGLDSI 214 (221)
Q Consensus 158 ~C~~~----PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP------~Gf~G~~~~~ 214 (221)
.|... +|.|+|+|+. ..|.|+ +||+|++|+.
T Consensus 474 ~C~~~~~~~~Cs~~G~C~~--------------------------G~C~C~~~~~~~~G~~G~~Ce~ 514 (687)
T 3k6s_B 474 SCRKDNNSIICSGLGDCVC--------------------------GQCLCHTSDVPGKLIYGQYCEC 514 (687)
T ss_dssp TTSSSTTSCGGGSSEEEET--------------------------TEEEECCCCSTTCCEESTTSCE
T ss_pred CCCCCCCCCcCCCCCEEeC--------------------------CEEEcCCCCCCCCCcccccccc
Confidence 47543 5999999973 179999 9999999973
No 96
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=78.46 E-value=1.1 Score=30.97 Aligned_cols=11 Identities=9% Similarity=0.301 Sum_probs=10.0
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
+|.|.||+||.
T Consensus 26 s~~C~C~~Gy~ 36 (69)
T 1kli_L 26 KRSCRCHEGYS 36 (69)
T ss_dssp EEEEECCTTEE
T ss_pred CEEEeCCCCCe
Confidence 69999999995
No 97
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=77.59 E-value=0.71 Score=29.89 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=11.3
Q ss_pred CCcceeeCCCCCC
Q psy2064 196 VSTFACVHPDKFY 208 (221)
Q Consensus 196 ~~~y~C~CP~Gf~ 208 (221)
..+|.|.||+||.
T Consensus 16 ~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 16 RSEVRCSCAHGYV 28 (51)
T ss_dssp TTEECCCCCTTEE
T ss_pred CCCeEEeCCCCcE
Confidence 4689999999996
No 98
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=77.00 E-value=1.7 Score=33.50 Aligned_cols=15 Identities=13% Similarity=0.607 Sum_probs=12.3
Q ss_pred CCcceeeCCCCCCCC
Q psy2064 196 VSTFACVHPDKFYDG 210 (221)
Q Consensus 196 ~~~y~C~CP~Gf~G~ 210 (221)
..+|.|.|++||+..
T Consensus 136 ~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 136 IGGYFCSCPPEYFLH 150 (159)
T ss_dssp TTEEEEECCTTCEEC
T ss_pred CCCEEEecCCCcEEC
Confidence 357999999999843
No 99
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=75.33 E-value=1.3 Score=42.75 Aligned_cols=18 Identities=22% Similarity=0.440 Sum_probs=14.6
Q ss_pred CCcceeeCCCCCC---CCCcc
Q psy2064 196 VSTFACVHPDKFY---DGLDS 213 (221)
Q Consensus 196 ~~~y~C~CP~Gf~---G~~~~ 213 (221)
..+|.|.||+||+ |..|.
T Consensus 312 ~~~~~C~C~~G~~~~~~~~C~ 332 (699)
T 1n7d_A 312 KIGYECLCPDGFQLVAQRRCE 332 (699)
T ss_dssp TTCCCCCCCSSSCCCSSSCCC
T ss_pred CCCcEEeCCCCeEcCCCCccc
Confidence 4589999999999 55664
No 100
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.18 E-value=2.8 Score=36.18 Aligned_cols=11 Identities=18% Similarity=0.531 Sum_probs=10.0
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
+|+|.||.||.
T Consensus 289 ~~~C~C~~g~~ 299 (318)
T 3sov_A 289 FYQCACPTGVK 299 (318)
T ss_dssp SEEEECSTTCC
T ss_pred CeEEECCCCCE
Confidence 69999999985
No 101
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=70.50 E-value=2 Score=41.16 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=27.1
Q ss_pred CCCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064 156 DNLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL 211 (221)
Q Consensus 156 ~~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~ 211 (221)
...|. .+||.....|+.. ....|.|+|+.||+|.-
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~---------------------~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLE---------------------RDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEEC---------------------TTSCEEEEECTTEESSS
T ss_pred cccCCCCCCCCCCCCCeeEeC---------------------CCCCEecCCCCCCCCCC
Confidence 46684 4799999999864 13468999999999854
No 102
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=69.58 E-value=1.1 Score=35.62 Aligned_cols=16 Identities=13% Similarity=-0.124 Sum_probs=14.3
Q ss_pred cceeeCCCCCCCCCcc
Q psy2064 198 TFACVHPDKFYDGLDS 213 (221)
Q Consensus 198 ~y~C~CP~Gf~G~~~~ 213 (221)
+.+|.|++||+|++|.
T Consensus 130 tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 130 TGQCQCLPHVSGRDCG 145 (162)
T ss_dssp TCCCCBCTTEESTTCC
T ss_pred CCEeECCCCCcCCCCC
Confidence 4689999999999986
No 103
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=66.11 E-value=2.3 Score=27.66 Aligned_cols=11 Identities=9% Similarity=0.301 Sum_probs=10.0
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
.|.|.||+||.
T Consensus 20 s~~C~C~~Gy~ 30 (53)
T 2bz6_L 20 KRSCRCHEGYS 30 (53)
T ss_dssp EEEEECCTTEE
T ss_pred CEEeeCCCCCE
Confidence 59999999996
No 104
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=65.31 E-value=4.6 Score=27.84 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCcEEccc
Q psy2064 157 NLCVQEPCLNYEQCVTV 173 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~ 173 (221)
++|.+.+|..|..|+.+
T Consensus 2 ~~C~~~~C~~g~~C~~~ 18 (74)
T 1lr7_A 2 ETCENVDCGPGKKCRMN 18 (74)
T ss_dssp CCSTTCCCCTTEEEEEC
T ss_pred CCCCCCcCcCCCEEeEC
Confidence 68999999999999975
No 105
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=63.46 E-value=3.4 Score=27.48 Aligned_cols=12 Identities=8% Similarity=0.429 Sum_probs=10.6
Q ss_pred CcceeeCCCCCC
Q psy2064 197 STFACVHPDKFY 208 (221)
Q Consensus 197 ~~y~C~CP~Gf~ 208 (221)
.+|.|.||+||.
T Consensus 19 gs~~C~C~~Gy~ 30 (59)
T 2wph_E 19 NKVVCSCTEGYR 30 (59)
T ss_dssp TCEEEECCTTEE
T ss_pred CCEEeeCCCCcE
Confidence 489999999995
No 106
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=63.07 E-value=14 Score=24.02 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=30.0
Q ss_pred EEEEecCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEEEee
Q psy2064 6 ITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQ 47 (221)
Q Consensus 6 vtiR~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~IfSvq 47 (221)
|.|.+.+.|+|+= ...++.+.+.+++.++.++++|.|+ ++
T Consensus 3 I~I~~~grt~eqK-~~L~~~it~~~~~~lg~~~~~v~V~-i~ 42 (62)
T 3m20_A 3 LIVYGPKLDVGKK-REFVERLTSVAAEIYGMDRSAITIL-IH 42 (62)
T ss_dssp EEEECSCCCHHHH-HHHHHHHHHHHHHHHTCCTTSCEEE-EE
T ss_pred EEEEECCCCHHHH-HHHHHHHHHHHHHHhCcCcceEEEE-EE
Confidence 3455567777663 5678889999999999999998644 44
No 107
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=61.69 E-value=2.8 Score=35.92 Aligned_cols=19 Identities=26% Similarity=0.817 Sum_probs=15.6
Q ss_pred CCCCCCCCCCCCCcEEccc
Q psy2064 155 DDNLCVQEPCLNYEQCVTV 173 (221)
Q Consensus 155 ~~~~C~~~PC~ngg~Cv~~ 173 (221)
+.++|..+||.|+|+|++.
T Consensus 4 d~~~C~~~pC~~~g~C~~~ 22 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDS 22 (317)
T ss_dssp --CCTTSCCCTTTCCCCCC
T ss_pred cCCcCCCCCCCCCCEeECC
Confidence 4578999999999999875
No 108
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=58.56 E-value=1.6 Score=40.48 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=35.7
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccc-----------cceeeeccCC-------CCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVAS-----------DSVLFRPIYP-------VSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s-----------~~~~f~~~~~-------~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..|+..-|.+.|+|+...--.++.--+.. ..+.+.+-.+ ...|.|+|=.|++|+.|...
T Consensus 337 ~~CS~~lC~~~GrC~Rk~~~s~~yLhL~p~s~~i~~~~~~~~~~~~g~~~~~d~~~~~~~F~C~Cy~gw~G~~C~~~ 413 (424)
T 2pe4_A 337 LLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERK 413 (424)
T ss_dssp HHHHHHHSTTSEEEEECTTSTTCCCCCCTTTEEEEECGGGCCEEEEECCCHHHHHHHHHHEEEEECTTBCTTTTCSB
T ss_pred HHhCHHhcCCCcEEeCCCCCCccccccCcccceeEecCCCCceEecCCCCHHHHHHHHhCcEeeccCCCCcccccCC
Confidence 58999999999999864221111111111 1222222211 23789999999999999843
No 109
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=52.63 E-value=4.2 Score=40.23 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL 215 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~ 215 (221)
..|. ..|...|+|+.. .|+|-+||+|+.|..+
T Consensus 535 ~~Cp-~~C~ghG~C~~G--------------------------~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 535 DGCL-DMCSGHGRCVQG--------------------------SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp SCSS-GGGGGSEEEETT--------------------------EEEECTTEESTTSCEE
T ss_pred CCCC-cccCCCcEECCC--------------------------CEeeCCCccCCCcCcc
Confidence 3454 378999999863 6999999999999854
No 110
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=52.48 E-value=12 Score=28.76 Aligned_cols=55 Identities=11% Similarity=0.225 Sum_probs=40.0
Q ss_pred EEEecCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEEEeeecCCC---CCCeeEEEEE
Q psy2064 7 TVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDV---TSRILNVSFS 62 (221)
Q Consensus 7 tiR~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~IfSvq~~~~~---~~~~lDV~fa 62 (221)
-|||+++. ++.+...-+.+.+.|+++++++++++.+-=+....-. .-..++|.+.
T Consensus 18 hlr~rgi~-~e~v~~lS~~Lid~La~i~~~~~e~fTle~i~s~~i~~G~~MP~VeV~~f 75 (122)
T 1u9d_A 18 HLRFRAVE-AHIVESLVPTLLNELSSLLSTARNAFTFELINTQYFAEGGVYPMVEVLWF 75 (122)
T ss_dssp EEEEESSC-HHHHHHHHHHHHHHHHHHHTCCGGGCEEEECCCCCCCTTCCCCEEEEEES
T ss_pred eEEECCCC-HHHHHHHhHHHHHHHHHHHCCCcccEEEEEeeeEEEecCCCCCEEEEEEc
Confidence 37898887 5677788889999999999999999888766631101 1135777665
No 111
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=49.00 E-value=22 Score=23.32 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=28.3
Q ss_pred EEEEec----CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRLD----DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~~----~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
|.|.+. +.|+|+ -...++.+.+.+++.+++++++|.|+
T Consensus 3 i~I~~~~~~~grs~eq-K~~l~~~lt~~l~~~lg~p~~~v~V~ 44 (67)
T 3m21_A 3 INIKLVPENGGPTNEQ-KQQLIEGVSDLMVKVLNKNKASIVVI 44 (67)
T ss_dssp EEEEECCBTTBSCHHH-HHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred EEEEEecCCCCCCHHH-HHHHHHHHHHHHHHHHCcCcccEEEE
Confidence 345555 355554 55678899999999999998887765
No 112
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=47.82 E-value=12 Score=35.45 Aligned_cols=12 Identities=17% Similarity=0.498 Sum_probs=10.3
Q ss_pred CcceeeCCCCCC
Q psy2064 197 STFACVHPDKFY 208 (221)
Q Consensus 197 ~~y~C~CP~Gf~ 208 (221)
.+|+|.||+||.
T Consensus 293 ~~~~C~C~~g~~ 304 (619)
T 3s94_A 293 PFYQCACPTGVK 304 (619)
T ss_dssp TSEEEECCTTCC
T ss_pred CCceEeCCchhe
Confidence 379999999994
No 113
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=46.79 E-value=11 Score=33.36 Aligned_cols=11 Identities=36% Similarity=0.933 Sum_probs=10.0
Q ss_pred cceeeCCCCCC
Q psy2064 198 TFACVHPDKFY 208 (221)
Q Consensus 198 ~y~C~CP~Gf~ 208 (221)
+|+|.||.||.
T Consensus 378 ~~~C~C~~g~~ 388 (400)
T 3p5b_L 378 KFTCACPDGML 388 (400)
T ss_dssp SEEEECCTTCE
T ss_pred CeeEECCCCCE
Confidence 69999999995
No 114
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=43.83 E-value=37 Score=24.40 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=28.1
Q ss_pred EEEec-CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 7 TVRLD-DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 7 tiR~~-~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.|... +.++|+- ..+++.+.+.|.+.||+++++|.|.
T Consensus 60 ~i~~~~g~~~eqk-~~l~~~i~~~l~~~lgi~~~~v~I~ 97 (113)
T 1hfo_A 60 TLMSIGGIEPSRN-RDHSAKLFDHLNTKLGIPKNRMYIH 97 (113)
T ss_dssp EEEESSSCSHHHH-HHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEecCCCHHHH-HHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 34433 4777663 5678889999999999999998764
No 115
>2o3b_B Endonuclease, sugar-non-specific nuclease inhibitor; metal complex, non-specific NU hydrolase-hydrolase inhibitor complex; HET: MES; 2.30A {Nostoc SP} SCOP: d.221.1.1 PDB: 1j57_A 1ktu_A
Probab=43.49 E-value=54 Score=25.68 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=37.4
Q ss_pred CCChhhhhHH-----------------HHHHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCC
Q psy2064 12 DMTKEAFLSP-----------------LLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDG 68 (221)
Q Consensus 12 ~~t~EeFl~~-----------------~~~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~ 68 (221)
-+++++|+.+ +|..+.+.|++.+ .+|++|=|. ...+|+++.-....|
T Consensus 61 ~~~~~~F~~~~~~~~~w~~~~e~~~a~~y~~L~~~lk~~l----~evkVYRVg------~~~ve~yIlG~~~~G 124 (136)
T 2o3b_B 61 VVDIDSFFSRATTPQDWYEDEENAVVAKFQKLLEVIKSNL----KNPQVYRLG------EVELDVYVIGETPAG 124 (136)
T ss_dssp EECHHHHTHHHHCCCTTCCHHHHHHHHHHHHHHHHHHHHS----EEEEEEEES------SSEEEEEEEEECTTS
T ss_pred EeCHHHhcccccccccccchHHHHHHHHHHHHHHHHHHhc----ccceEEEEC------CEEEEEEEEEecCCC
Confidence 3588899986 7899999999988 789999884 457788887766654
No 116
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=42.38 E-value=35 Score=21.41 Aligned_cols=38 Identities=16% Similarity=0.281 Sum_probs=27.6
Q ss_pred EEEEe-cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRL-DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~-~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.|.+ .+.|+| =-...++.+.+.|.+.+++++++|.|.
T Consensus 3 i~I~~~~grs~e-~k~~l~~~i~~~l~~~lg~p~~~v~v~ 41 (62)
T 1otf_A 3 AQLYIIEGRTDE-QKETLIRQVSEAMANSLDAPLERVRVL 41 (62)
T ss_dssp EEEEEESCCCHH-HHHHHHHHHHHHHHHHHTCCGGGCEEE
T ss_pred EEEEEcCCCCHH-HHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 34453 456554 446678899999999999998887665
No 117
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=41.87 E-value=41 Score=24.28 Aligned_cols=37 Identities=11% Similarity=0.159 Sum_probs=28.0
Q ss_pred EEEec-CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 7 TVRLD-DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 7 tiR~~-~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.|... +.++|+- ..+++.+.+.|.+.|++++++|.|.
T Consensus 61 ~i~~~~g~~~eqk-~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 1uiz_A 61 SLCSIGKIGGPQN-KSYTKLLCDILTKQLNIPANRVYIN 98 (115)
T ss_dssp EEEESSCCSHHHH-HHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEecCCCHHHH-HHHHHHHHHHHHHHhCcCcceEEEE
Confidence 34433 4776663 5678889999999999999998765
No 118
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=41.71 E-value=14 Score=35.16 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=11.2
Q ss_pred CcceeeCCCCCCC
Q psy2064 197 STFACVHPDKFYD 209 (221)
Q Consensus 197 ~~y~C~CP~Gf~G 209 (221)
.+|.|.||+||.-
T Consensus 285 ~~~~C~C~~g~~l 297 (628)
T 4a0p_A 285 GGFVCGCPAHYSL 297 (628)
T ss_dssp TEEEEECSTTCEE
T ss_pred CCeeEEcCCCcEe
Confidence 5899999999953
No 119
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=41.30 E-value=42 Score=24.45 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=28.5
Q ss_pred EEEEec-CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRLD-DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~~-~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.|... +.++|+- ..+++.+-+.|.+.||+++++|.|.
T Consensus 60 i~I~~~~g~~~eqk-~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (119)
T 2os5_A 60 IKVESIGALSADDN-IRHTQKITQFCQDTLKLPKDKVIIT 98 (119)
T ss_dssp EEEEESSCCCHHHH-HHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEecCCCHHHH-HHHHHHHHHHHHHHhCcCcccEEEE
Confidence 344433 4777663 5678889999999999999998765
No 120
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=39.04 E-value=43 Score=20.94 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=27.7
Q ss_pred EEEEe-cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRL-DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~-~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.|.+ .+.|+|+ -...++.+.+.|.+.+++++++|.|.
T Consensus 3 i~i~~~~grs~eq-k~~l~~~i~~~l~~~lg~~~~~v~V~ 41 (61)
T 2opa_A 3 VTVKMLEGRTDEQ-KRNLVEKVTEAVKETTGASEEKIVVF 41 (61)
T ss_dssp EEEEEESCCCHHH-HHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred EEEEEcCCCCHHH-HHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 34553 4666654 35678889999999999998887654
No 121
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=38.44 E-value=16 Score=34.62 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
.++|.-.||+|++.-... -..-.|.|+.||.|..|..
T Consensus 464 ~~~c~c~pC~~~g~~~~~----------------------gt~C~c~C~~G~~G~~C~~ 500 (554)
T 3ojy_A 464 FNACRCGPCFNNGVPILE----------------------GTSCRCQCRLGSLGAACEQ 500 (554)
T ss_dssp TCGGGSCCCTTTCCEEEE----------------------TTEEEECCCSSCCSSSCC-
T ss_pred cccccccccCCCCEEcCC----------------------CCcccccCCCCCCCCCccc
Confidence 456766699999975221 2234678999999998864
No 122
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=38.35 E-value=13 Score=22.23 Aligned_cols=14 Identities=43% Similarity=0.802 Sum_probs=10.0
Q ss_pred CCCCCCCCCCcEEc
Q psy2064 158 LCVQEPCLNYEQCV 171 (221)
Q Consensus 158 ~C~~~PC~ngg~Cv 171 (221)
.|.-..|.|..+|-
T Consensus 4 qcqcgscknneqcq 17 (36)
T 1rju_V 4 QCQCGSCKNNEQCQ 17 (36)
T ss_dssp CCCSTTTTTCGGGT
T ss_pred ccccCCccChHHHh
Confidence 45566788888874
No 123
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=38.27 E-value=48 Score=24.39 Aligned_cols=38 Identities=8% Similarity=0.168 Sum_probs=29.0
Q ss_pred EEEE-ecCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVR-LDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR-~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
|.|. +.+.|+|+= ...++.+-+.|.+.||.++++|.|.
T Consensus 62 i~i~~~~grt~eqK-~~l~~~l~~~l~~~lg~~~~~v~V~ 100 (128)
T 1mww_A 62 IEINLMAGRMEGTK-KRLIKMLFSELEYKLGIRAHDVEIT 100 (128)
T ss_dssp EEEEEETTCCHHHH-HHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHHHHHHhCcChhhEEEE
Confidence 4455 557777764 5678889999999999999997765
No 124
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=37.64 E-value=50 Score=24.48 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=29.4
Q ss_pred EEEEecCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
|.|.+.+.|+|+ -...++.+-+.|++.++.++++|.|.
T Consensus 69 I~i~~~grt~eq-K~~l~~~l~~~l~~~lg~~~~~v~I~ 106 (131)
T 2aal_A 69 LTVISRPRSEEQ-KVCFYKLLTGALERDCGISPDDVIVA 106 (131)
T ss_dssp EEEEESCCCHHH-HHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEeCCCCHHH-HHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 455566777776 34578889999999999999997664
No 125
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=37.15 E-value=49 Score=23.83 Aligned_cols=32 Identities=9% Similarity=0.192 Sum_probs=25.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 12 DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 12 ~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.|+|+- ..+++.+.+.|.+.|++++++|.|.
T Consensus 67 g~t~eqk-~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 2xcz_A 67 ALDGSRT-QEVSELVCGHIEQNLGIPADRIYIG 98 (115)
T ss_dssp CCCTTHH-HHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCHHHH-HHHHHHHHHHHHHHhCcCcccEEEE
Confidence 4777763 4678889999999999999998765
No 126
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=36.86 E-value=14 Score=34.86 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
.++|.-.||+|++..... ...-.|.||.||.|.-|..
T Consensus 446 ~~~c~C~pC~~~~~~~~~----------------------gt~C~c~C~~g~~G~~c~~ 482 (537)
T 3ojy_B 446 VSSCHCAPCQGNGVPVLK----------------------GSRCDCICPVGSQGLACEV 482 (537)
T ss_dssp TCGGGSCCCSTTCEEEEE----------------------TTEEEEECCTTEETGGGCE
T ss_pred hCcccCCCCCcCCEEecC----------------------CCceeccCCCCcccccccC
Confidence 356655699999976543 2345678999999988764
No 127
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=36.79 E-value=48 Score=21.42 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=25.4
Q ss_pred cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 11 DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 11 ~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.+.|+|+ .....+.+.+.+.+.+++++++|.|.
T Consensus 9 ~Grs~eq-k~~L~~~it~~~~~~lg~p~~~v~V~ 41 (65)
T 3ry0_A 9 EGRSPQE-VAALGEALTAAAHETLGTPVEAVRVI 41 (65)
T ss_dssp SCCCHHH-HHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred CCCCHHH-HHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 4555544 56678899999999999998887654
No 128
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=36.38 E-value=14 Score=35.02 Aligned_cols=12 Identities=25% Similarity=0.495 Sum_probs=10.2
Q ss_pred CcceeeCCCCCC
Q psy2064 197 STFACVHPDKFY 208 (221)
Q Consensus 197 ~~y~C~CP~Gf~ 208 (221)
.+|.|.||.||.
T Consensus 597 ~~~~C~C~~g~~ 608 (619)
T 3s94_A 597 QGLRCACPIGFE 608 (619)
T ss_dssp TEEEEECCTTCE
T ss_pred CCeEEECCCCCE
Confidence 369999999994
No 129
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=35.84 E-value=12 Score=34.66 Aligned_cols=17 Identities=12% Similarity=0.032 Sum_probs=14.5
Q ss_pred CcceeeCCCCCCCCCcc
Q psy2064 197 STFACVHPDKFYDGLDS 213 (221)
Q Consensus 197 ~~y~C~CP~Gf~G~~~~ 213 (221)
.++.|.|+.|++|+.|+
T Consensus 311 g~~~C~C~~~ttG~~CE 327 (426)
T 3zyj_B 311 SKLTCECEHNTTGPDCG 327 (426)
T ss_dssp TEEEECCCTTEESSSSC
T ss_pred CCceeeCCCCCcCCCcc
Confidence 35789999999999887
No 130
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=34.50 E-value=61 Score=21.45 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=25.8
Q ss_pred cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 11 DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 11 ~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.+.|+|+ ....++.+.+.+.+.++.++++|.|.
T Consensus 10 ~grs~eq-K~~L~~~it~~l~~~lg~p~~~v~V~ 42 (72)
T 3mb2_A 10 EGRSTEQ-KAELARALSAAAAAAFDVPLAEVRLI 42 (72)
T ss_dssp SCCCHHH-HHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHH-HHHHHHHHHHHHHHHhCCCcccEEEE
Confidence 4666554 56678889999999999998887665
No 131
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=33.90 E-value=11 Score=29.75 Aligned_cols=16 Identities=13% Similarity=-0.226 Sum_probs=12.0
Q ss_pred ccee-eCCCCCCCCCcc
Q psy2064 198 TFAC-VHPDKFYDGLDS 213 (221)
Q Consensus 198 ~y~C-~CP~Gf~G~~~~ 213 (221)
+..| .|+++|+|++|+
T Consensus 74 tG~C~~C~~g~~G~~Ce 90 (162)
T 1klo_A 74 TGECLKCIYNTAGFYCD 90 (162)
T ss_dssp TCCBCCBCTTEETTTTC
T ss_pred CCcccCCCCCCcCCCcC
Confidence 4578 488888888876
No 132
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=32.32 E-value=64 Score=21.62 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=26.9
Q ss_pred EEEEec-CC-ChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 6 ITVRLD-DM-TKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 6 vtiR~~-~~-t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
|.|.+. +- |+|+ .....+.+.+.|.+.+++++++|.|.
T Consensus 3 I~I~l~~Grls~eq-k~~L~~~l~~~l~~~lgip~~~v~V~ 42 (76)
T 1gyx_A 3 IDIKCFPRELDEQQ-KAALAADITDVIIRHLNSKDSSISIA 42 (76)
T ss_dssp EEEEESCCCCCHHH-HHHHHHHHHHHHHHHHTCCGGGCEEE
T ss_pred EEEEECCCCCCHHH-HHHHHHHHHHHHHHHhCcCCceEEEE
Confidence 445543 33 5544 46678889999999999998887543
No 133
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=31.50 E-value=60 Score=21.94 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=26.5
Q ss_pred EEEe-cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 7 TVRL-DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 7 tiR~-~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.|.+ .+.|+ |=-...++.+.+.+.+.+++++++|.|+
T Consensus 5 ~I~~~~Grs~-eqK~~L~~~it~~l~~~lg~p~~~v~V~ 42 (76)
T 3ej9_A 5 SCDMRYGRTD-EQKRALSAGLLRVISEATGEPRENIFFV 42 (76)
T ss_dssp EEEEETTCCH-HHHHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred EEEEcCCCCH-HHHHHHHHHHHHHHHHHHCcCcccEEEE
Confidence 3443 35554 4445678889999999999999987654
No 134
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=29.48 E-value=1.1e+02 Score=19.19 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=23.8
Q ss_pred cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 11 DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 11 ~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.+.|+|+= ...++.+-+.|++.++.++++|.|.
T Consensus 10 ~g~s~eqk-~~l~~~lt~~l~~~lg~~~~~v~V~ 42 (64)
T 3abf_A 10 EGRPPEKK-RELVRRLTEMASRLLGEPYEEVRVI 42 (64)
T ss_dssp TTCCHHHH-HHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCHHHH-HHHHHHHHHHHHHHhCCCcccEEEE
Confidence 45565532 4467888899999999998876654
No 135
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=28.75 E-value=64 Score=23.09 Aligned_cols=32 Identities=3% Similarity=0.083 Sum_probs=25.1
Q ss_pred CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 12 DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 12 ~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.++|+ -..+++.+-+.|.+.|++++++|.|.
T Consensus 67 g~~~eq-k~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 67 GYGPSE-PEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp CCCTTH-HHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCHHH-HHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 355443 35688889999999999999998775
No 136
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=27.68 E-value=22 Score=32.11 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=15.9
Q ss_pred CCcceeeCCCCCCCCCccc
Q psy2064 196 VSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 196 ~~~y~C~CP~Gf~G~~~~~ 214 (221)
..++.|.|++|++|++|.-
T Consensus 269 ~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 269 FDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp TSCEEECCCTTEESTTSCE
T ss_pred CCCeeeeCcCCCcCCCccc
Confidence 3478899999999999973
No 137
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=27.55 E-value=87 Score=19.26 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=25.2
Q ss_pred EEEe-cCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 7 TVRL-DDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 7 tiR~-~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
.|++ .+.++| =-....+.+.+.|++.++.+++++.|.
T Consensus 7 ~i~~~~g~s~e-~k~~l~~~l~~~l~~~lg~p~~~v~v~ 44 (63)
T 2x4k_A 7 NVKLLEGRSDE-QLKNLVSEVTDAVEKTTGANRQAIHVV 44 (63)
T ss_dssp EEEEESCCCHH-HHHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred EEEEcCCCCHH-HHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 3443 355554 335577888899999999998776553
No 138
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=27.21 E-value=57 Score=24.01 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=23.1
Q ss_pred CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 12 DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 12 ~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+.|+|+ -..+++.+-+.|.+.||+++++|.|.
T Consensus 67 g~t~eq-k~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (125)
T 2wkb_A 67 GINRSN-NSLLADKITKILSNHLSVKPRRVYIE 98 (125)
T ss_dssp ----CT-HHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCHHH-HHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 355544 35688899999999999999998765
No 139
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=25.88 E-value=65 Score=23.83 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEEeeec
Q psy2064 22 LLNFFMDGLAAIIPCPRENIYLFSIQDD 49 (221)
Q Consensus 22 ~~~~f~~~La~~l~~~~~~V~IfSvq~~ 49 (221)
...-.++.||..+++.++.|.||++...
T Consensus 31 sk~eirekLAk~~~~~~~~Vvv~~~~t~ 58 (101)
T 1xn9_A 31 SRNDVRNKLAAMLNAPLELLVIQRIKTE 58 (101)
T ss_dssp CHHHHHHHHHHHTTCCTTTEEEEEEEEC
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEeeEec
Confidence 3566899999999999999999999953
No 140
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=25.84 E-value=6.2 Score=33.04 Aligned_cols=16 Identities=19% Similarity=0.040 Sum_probs=13.7
Q ss_pred cceeeCCCCCCCCCcc
Q psy2064 198 TFACVHPDKFYDGLDS 213 (221)
Q Consensus 198 ~y~C~CP~Gf~G~~~~ 213 (221)
.+.|+|+-+++|.+|.
T Consensus 185 ~~~c~~~~~~~~~~c~ 200 (218)
T 4deq_A 185 PQTCKCSCKNTDSRCK 200 (218)
T ss_dssp TTTCCEEESSCHHHHH
T ss_pred CcceEccCCccccccc
Confidence 5789999999998775
No 141
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=25.33 E-value=22 Score=35.17 Aligned_cols=31 Identities=19% Similarity=0.489 Sum_probs=25.2
Q ss_pred CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064 158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI 214 (221)
Q Consensus 158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~ 214 (221)
.| .+.|...|.|+. +-.|.|-+||.|+.|++
T Consensus 187 ~C-~~~C~g~G~C~~-------------------------~~~C~C~~g~~g~~C~~ 217 (725)
T 2e26_A 187 QC-EEMCYGHGSCIN-------------------------GTKCICDPGYSGPTCKI 217 (725)
T ss_dssp CC-GGGGGGSEEEET-------------------------TTEEEECTTEESTTSCE
T ss_pred CC-ccccCCCcEecC-------------------------CCeeeccCCcccCcccc
Confidence 35 346999999964 34799999999999986
No 142
>1ylq_A Putative nucleotidyltransferase, hypothetical Pro AF0614; structural genomics, PSI, protein ST initiative; 2.02A {Archaeoglobus fulgidus} SCOP: d.218.1.5
Probab=24.91 E-value=64 Score=22.70 Aligned_cols=42 Identities=10% Similarity=0.065 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEEeee-cCCCCC-CeeEEEEEEEc
Q psy2064 22 LLNFFMDGLAAIIPCPRENIYLFSIQD-DTDVTS-RILNVSFSARA 65 (221)
Q Consensus 22 ~~~~f~~~La~~l~~~~~~V~IfSvq~-~~~~~~-~~lDV~fav~~ 65 (221)
..+.+++.+++.++. ..|.+|+=.. ....++ .++|+++....
T Consensus 3 ~l~~i~~~l~~~~~~--~~v~LFGS~ArG~~~~~~SDiDllV~~~~ 46 (96)
T 1ylq_A 3 HMKEIKEITKKDVQD--AEIYLYGSVVEGDYSIGLSDIDVAIVSDV 46 (96)
T ss_dssp HHHHHHHHHHHHCTT--CEEEEESHHHHCCSSSCCCSEEEEEECGG
T ss_pred HHHHHHHHHHHHcCC--cEEEEEEEEEeCCCCCCCCceEEEEEeCC
Confidence 456788888888876 7899995443 223345 79999886543
No 143
>2qp2_A Unknown protein; toxin, unknown function; 2.00A {Photorhabdus luminescens subsp}
Probab=24.88 E-value=22 Score=33.53 Aligned_cols=21 Identities=10% Similarity=-0.001 Sum_probs=17.3
Q ss_pred ceeeCCCCCCCCCcccccccc
Q psy2064 199 FACVHPDKFYDGLDSILTTSN 219 (221)
Q Consensus 199 y~C~CP~Gf~G~~~~~~~~~~ 219 (221)
-.|.||.||.|+.+..+.+..
T Consensus 371 c~c~cp~g~~g~~~~~~~n~~ 391 (511)
T 2qp2_A 371 NTNTPPEGYIGLKSTKDENLN 391 (511)
T ss_dssp TTCCCCTTCEECBSSSBCCSB
T ss_pred cCccCCCCccccccccccccC
Confidence 469999999999998776544
No 144
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=24.06 E-value=14 Score=33.78 Aligned_cols=31 Identities=13% Similarity=0.284 Sum_probs=23.5
Q ss_pred CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC--ccc
Q psy2064 157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL--DSI 214 (221)
Q Consensus 157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~--~~~ 214 (221)
+.|. +.|...|.|+.. .|.|-+||.|+. |..
T Consensus 192 ~~Cp-~~CsGhG~C~~g--------------------------~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCP-SYCSGHGDCISG--------------------------VCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCG-GGGGGSEEEETT--------------------------EEEECTTEEEETTEEEE
T ss_pred ccCc-cccCCCceecCC--------------------------eEEecCCcccCCCcccc
Confidence 3575 468889999642 699999999986 553
No 145
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=23.69 E-value=46 Score=24.76 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064 156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG 210 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~ 210 (221)
...|..+-|+....|.... .....|+|.+||.|.
T Consensus 4 ~h~C~~~~C~~NA~C~r~~---------------------~g~e~C~C~~gy~gd 37 (99)
T 1ob1_C 4 QHQCVKKQCPQNSGCFRHL---------------------DEREECKCLLNYKQE 37 (99)
T ss_dssp TTCCCSCCCCTTEEEECCT---------------------TSCCEEEECTTEEEE
T ss_pred ceEeccCCCCCCCCeEEcC---------------------CCCEEEEecCCeecC
Confidence 3578888899999996532 357899999999874
No 146
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=23.56 E-value=39 Score=31.87 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=24.4
Q ss_pred CCCCC-CC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCC--CCCCCcc
Q psy2064 155 DDNLC-VQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDK--FYDGLDS 213 (221)
Q Consensus 155 ~~~~C-~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~G--f~G~~~~ 213 (221)
..++| .- .||+||+.=.. ...=.|.||++ ..|.-|.
T Consensus 349 e~~~c~~C~~PC~nn~~~l~-----------------------g~~C~C~C~~~~~t~~~~C~ 388 (540)
T 3nsj_A 349 SRARWQNCSRPCRSGQHKSS-----------------------HDSCQCECQDSKVTNQDCCP 388 (540)
T ss_dssp HTCBCCCTTSCCBTTEEECS-----------------------SCTTCEEESCTTTBCGGGCB
T ss_pred hcCchhhhcccccCCCccCC-----------------------CCceEeeCCCCCCccccccc
Confidence 35788 65 49999985321 23457999999 6676665
No 147
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=23.32 E-value=34 Score=32.41 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=10.6
Q ss_pred CCcceeeCCCCCC
Q psy2064 196 VSTFACVHPDKFY 208 (221)
Q Consensus 196 ~~~y~C~CP~Gf~ 208 (221)
..+++|.||.||.
T Consensus 598 ~~~~~C~C~~g~~ 610 (628)
T 4a0p_A 598 DGTTRCSCPMHLV 610 (628)
T ss_dssp TSCEEEECCTTEE
T ss_pred CCCeeeeCCCCCE
Confidence 4468999999984
No 148
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=22.26 E-value=86 Score=23.67 Aligned_cols=28 Identities=4% Similarity=0.081 Sum_probs=23.0
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCcEEEE
Q psy2064 17 AFLSPLLNFFMDGLAAIIPCPRENIYLF 44 (221)
Q Consensus 17 eFl~~~~~~f~~~La~~l~~~~~~V~If 44 (221)
+-=..+++.+.+.|.+.|++++++|.|-
T Consensus 92 e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 92 SEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp THHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 3344578899999999999999998875
No 149
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A
Probab=21.77 E-value=48 Score=27.53 Aligned_cols=18 Identities=17% Similarity=0.366 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCCcEEccc
Q psy2064 156 DNLCVQEPCLNYEQCVTV 173 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~ 173 (221)
.++|....|..|..|+..
T Consensus 61 kd~C~~v~C~~G~~C~~~ 78 (209)
T 3sek_C 61 KDSCDGVECGPGKACRML 78 (209)
T ss_dssp CSSSTTCCCCTTEEEEC-
T ss_pred cCcCCCCcCCCCCCCccc
Confidence 578999999999999875
No 150
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=21.20 E-value=69 Score=23.77 Aligned_cols=28 Identities=7% Similarity=0.076 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEEeeec
Q psy2064 22 LLNFFMDGLAAIIPCPRENIYLFSIQDD 49 (221)
Q Consensus 22 ~~~~f~~~La~~l~~~~~~V~IfSvq~~ 49 (221)
...-.++.||..+++.++.|.||++...
T Consensus 31 sk~eirekLAk~~~~~~d~Vvv~~~~T~ 58 (102)
T 1ywx_A 31 SIKDVKMKLVAVLNANKQVLVVDTLDQI 58 (102)
T ss_dssp CHHHHHHHHHHHHTSCSTTEEEEEEEEC
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEccEec
Confidence 3566899999999999999999999953
No 151
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D
Probab=20.86 E-value=57 Score=28.39 Aligned_cols=18 Identities=17% Similarity=0.360 Sum_probs=16.1
Q ss_pred CCCCCCCCCCCCcEEccc
Q psy2064 156 DNLCVQEPCLNYEQCVTV 173 (221)
Q Consensus 156 ~~~C~~~PC~ngg~Cv~~ 173 (221)
.++|....|..|..|+.+
T Consensus 63 kd~C~~v~C~~g~~C~~~ 80 (288)
T 3hh2_C 63 KETCENVDCGPGKKCRMN 80 (288)
T ss_dssp CSSSTTCCCCTTEEEEEC
T ss_pred cccCCCCcCCCCCEeeEC
Confidence 579999999999999874
No 152
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=20.77 E-value=1.2e+02 Score=22.80 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=26.8
Q ss_pred CCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEEEe
Q psy2064 12 DMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSI 46 (221)
Q Consensus 12 ~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~IfSv 46 (221)
+-|+|+ -..+++.+-+.|.+.+++++++|.|.=.
T Consensus 72 Grt~eq-k~~l~~~l~~~l~~~lgi~~~~v~V~i~ 105 (148)
T 3n4h_A 72 GRTEKQ-KEELLLRLTQEIALILGIPNEEVWVYIT 105 (148)
T ss_dssp CCCHHH-HHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CCCHHH-HHHHHHHHHHHHHHHhCcCcCcEEEEEE
Confidence 556555 5678999999999999999999776533
Done!