RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2064
         (221 letters)



>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 63

 Score = 23.8 bits (51), Expect = 5.9
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 157 NLCVQEPCLNYEQCVTVLKFGNASGFV 183
               +  C+N  +C  V    N S ++
Sbjct: 7   AEKEKTFCVNGGECFMVKDLSNPSRYL 33


>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
           [TaxId: 9823]}
          Length = 37

 Score = 22.3 bits (48), Expect = 9.4
 Identities = 6/17 (35%), Positives = 7/17 (41%)

Query: 155 DDNLCVQEPCLNYEQCV 171
           D + C   PC N   C 
Sbjct: 1   DGDQCASSPCQNGGSCK 17


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.138    0.405 

Gapped
Lambda     K      H
   0.267   0.0692    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 776,275
Number of extensions: 33643
Number of successful extensions: 78
Number of sequences better than 10.0: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 3
Length of query: 221
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 139
Effective length of database: 1,281,736
Effective search space: 178161304
Effective search space used: 178161304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 51 (23.5 bits)