BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2067
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=Pongo abelii GN=GRPEL1
PE=2 SV=1
Length = 217
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 15/149 (10%)
Query: 26 LSAQSNVKFLWS--KAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQI 83
LS + + + L + K +N + E S+ A +TE T ++ K+K E E LK+ +
Sbjct: 18 LSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL-LEEKVKLE-EQLKETV 75
Query: 84 EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
E KYKRALAD EN RQR K +EE+KLYGIQ+FCKDLL++AD L A +
Sbjct: 76 E-----------KYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQC 124
Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
VPKEE+KD NPHLK+LYEGL+MT+ ++K
Sbjct: 125 VPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153
>sp|Q9HAV7|GRPE1_HUMAN GrpE protein homolog 1, mitochondrial OS=Homo sapiens GN=GRPEL1
PE=1 SV=2
Length = 217
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 15/149 (10%)
Query: 26 LSAQSNVKFLWS--KAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQI 83
LS + + + L + K +N + E S+ A +TE T ++ K+K E E LK+ +
Sbjct: 18 LSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL-LEEKVKLE-EQLKETV 75
Query: 84 EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
E KYKRALAD EN RQR K +EE+KLYGIQ+FCKDLL++AD L A +
Sbjct: 76 E-----------KYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQC 124
Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
VPKEE+KD NPHLK+LYEGL+MT+ ++K
Sbjct: 125 VPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153
>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus
GN=Grpel1 PE=1 SV=2
Length = 217
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L E+ + ++KYKRALAD EN RQR K +EE+KLYGIQ FCKDLL++AD L A +SVP
Sbjct: 67 LEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVP 126
Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
KEEV ++NPHLKSLYEGL+MT+ ++K
Sbjct: 127 KEEVSNNNPHLKSLYEGLVMTEVQIQK 153
>sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=Bos taurus GN=GRPEL1 PE=1
SV=1
Length = 217
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 69/87 (79%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L E+ + ++KYKRALAD EN RQR K +EE+KLYGIQ FCKDLL++AD L A + VP
Sbjct: 67 LEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQCVP 126
Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
+EE++D NPHLKSLYEGL+MT+ ++K
Sbjct: 127 QEEIRDDNPHLKSLYEGLVMTEVQIQK 153
>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1
PE=1 SV=1
Length = 217
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 70/87 (80%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L E+ + ++KYKRALAD EN RQR K +EE+KLYGIQ FCKDLL++AD L A +SVP
Sbjct: 67 LEEQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVP 126
Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
KEE+ ++NPHLKSLYEGL+MT+ ++K
Sbjct: 127 KEEISNNNPHLKSLYEGLVMTEVQIQK 153
>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster
GN=Roe1 PE=2 SV=2
Length = 213
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 5/104 (4%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+E L K++ A E+N++L+DKYKR+LAD EN R R NKQ+ ++K++GIQSFCKDLL++A
Sbjct: 54 EVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVA 113
Query: 135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA 174
DTL A ++VPK+++ N LK+LYEGL MT +L K+H
Sbjct: 114 DTLGHATQAVPKDKL-SGNADLKNLYEGLTMTRASLLQVFKRHG 156
>sp|Q18421|GRPE_CAEEL GrpE protein homolog, mitochondrial OS=Caenorhabditis elegans
GN=C34C12.8 PE=1 SV=1
Length = 237
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 64/94 (68%)
Query: 73 KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLD 132
K + L K+ + L ++ D DKY+R+LA+ EN R+R KQ +++K++ IQSFCKDLL+
Sbjct: 73 KGAFDVLLKEYDDLQAESLDFKDKYQRSLAETENVRRRGIKQTDDAKVFAIQSFCKDLLE 132
Query: 133 IADTLSLANESVPKEEVKDSNPHLKSLYEGLLMT 166
++D L +A +SV E+++ LK L+EG+ MT
Sbjct: 133 VSDILDIAVKSVKPEDLESGGKALKDLFEGVSMT 166
>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE
PE=3 SV=1
Length = 207
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 45 ESESKKDDSDSTASSSSTESTSN--VDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALA 102
E++ +KD++ TA +++ S + P EE + EAL + +D DK R LA
Sbjct: 3 ETDGQKDNNQDTAQAAADPVVSKPYIMPDDPEEGSN-----EALVREAADARDKMLRTLA 57
Query: 103 DGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEG 162
+ EN R+R K++ +++ YG+ SF +D+LDIAD L A ++VP E ++ P LK+L EG
Sbjct: 58 EMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAVPAEARANAEPGLKALIEG 117
Query: 163 LLMTDGNL 170
+ +T+ +L
Sbjct: 118 VELTERSL 125
>sp|Q8TAA5|GRPE2_HUMAN GrpE protein homolog 2, mitochondrial OS=Homo sapiens GN=GRPEL2
PE=1 SV=1
Length = 225
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 16/122 (13%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L ++ DL +Y+RA+AD EN R+R + +E++K++GIQSFCKDL+++AD L E +
Sbjct: 69 LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128
Query: 146 KE-EVKDSNPHLKSLYEGLLMTDGNLK----KHA-----------HPVEYPSVVIIPDSI 189
+E E +D L+ ++ GLL+ + LK KH P E+ + +P +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188
Query: 190 AV 191
V
Sbjct: 189 GV 190
>sp|Q5R435|GRPE2_PONAB GrpE protein homolog 2, mitochondrial OS=Pongo abelii GN=GRPEL2
PE=2 SV=1
Length = 225
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 16/122 (13%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L ++ DL +Y+RA+AD EN R+R + +E++K++GIQSFCKDL+++AD L E +
Sbjct: 69 LEKEVQDLTVRYQRAVADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128
Query: 146 KE-EVKDSNPHLKSLYEGLLMTDGNLK----KHA-----------HPVEYPSVVIIPDSI 189
+E E +D L+ ++ GLL+ + LK KH P E+ + +P +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188
Query: 190 AV 191
V
Sbjct: 189 GV 190
>sp|Q6NCY6|GRPE_RHOPA Protein GrpE OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=grpE PE=3 SV=2
Length = 207
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 45 ESESKKDDSDSTASSSSTESTSN--VDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALA 102
E++ +KD++ TA +++ S + P EE + EAL + +D DK R LA
Sbjct: 3 ETDGQKDNNQDTAQAAADPVVSKPYIMPDDPEEGSN-----EALVREAADARDKMLRTLA 57
Query: 103 DGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEG 162
+ EN R+R K++ +++ YG+ SF +D+LDIAD L A ++VP + ++ P LK+L EG
Sbjct: 58 EMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAVPADARANAEPGLKALIEG 117
Query: 163 LLMTDGNL 170
+ +T+ +L
Sbjct: 118 VELTERSL 125
>sp|Q0P5N5|GRPE2_BOVIN GrpE protein homolog 2, mitochondrial OS=Bos taurus GN=GRPEL2 PE=2
SV=1
Length = 224
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 16/129 (12%)
Query: 79 LKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLS 138
LK + L ++ DL +Y+RA+AD EN R+R + +E++K++GIQSFCKDL+++AD L
Sbjct: 61 LKLKAVKLEKEVQDLTVRYQRAVADSENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILE 120
Query: 139 LANESVPKE-EVKDSNPHLKSLYEGLLMTDGNLK----KHA-----------HPVEYPSV 182
E + +E E D L+ ++ GL + + LK KH P E+ +
Sbjct: 121 KTTECISEETEPADQKLTLEKIFRGLSLLEAKLKSVFAKHGLEKMTPIGDKYDPHEHELI 180
Query: 183 VIIPDSIAV 191
+P + V
Sbjct: 181 CHVPAGVGV 189
>sp|O43047|GRPE_SCHPO GrpE protein homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mge1 PE=3 SV=1
Length = 223
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 15/155 (9%)
Query: 23 PQTL-SAQSNVK-FLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPK-IKEELEDL 79
P+TL A N + FLW E KEE +++ T NVD K ++ +L +L
Sbjct: 14 PRTLIRAPINKRSFLWYSTEAAKEEKPAEE----------KVAETENVDVKELQSKLSEL 63
Query: 80 KKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSL 139
K + EA +++ ++L +++LAD N R + +E+++ + +Q KDLLD D L
Sbjct: 64 KSKYEAKDKEVAELKGSIRQSLADYRNLENRMKRDMEQTRAFAVQKLTKDLLDSVDNLER 123
Query: 140 ANESVPKEEV--KDSNPHLKSLYEGLLMTDGNLKK 172
A VP+E+ ++SN L LYEGL MT+ NL K
Sbjct: 124 ALSIVPEEKRNNRESNKDLVDLYEGLAMTESNLMK 158
>sp|B8ET77|GRPE_METSB Protein GrpE OS=Methylocella silvestris (strain BL2 / DSM 15510 /
NCIMB 13906) GN=grpE PE=3 SV=1
Length = 187
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 41 NKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRA 100
N + +E+ D++D+ + S E DP + +E L +N+ L DK R
Sbjct: 2 NDLKNAENGPDEADTPQGAPSQEP----DPFVV---------LENLQAENTSLKDKLLRT 48
Query: 101 LADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLY 160
LAD EN R+R K++ ++K YG+ SF +D+L AD L A +VP E + P +++L
Sbjct: 49 LADMENLRRRTEKEVADAKTYGVTSFARDMLTFADNLHRALANVPAEARAKAEPAVQTLI 108
Query: 161 EGLLMTD 167
EGL +T+
Sbjct: 109 EGLQLTE 115
>sp|O88396|GRPE2_MOUSE GrpE protein homolog 2, mitochondrial OS=Mus musculus GN=Grpel2
PE=2 SV=2
Length = 224
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 59 SSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEES 118
SS + + P + E+ L+ + L ++ DL +Y+RA+AD EN R+R + +E++
Sbjct: 43 CSSEDPPDGLGPSLAEQA--LRLKAVKLEKEVQDLTLRYQRAVADCENIRRRTQRCVEDA 100
Query: 119 KLYGIQSFCKDLLDIADTL-SLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLK----KH 173
K++GIQSFCKDL+++AD L A E +D L+ +++GL + + LK KH
Sbjct: 101 KIFGIQSFCKDLVEVADILEKTAKCCSEGAEPEDHRRTLEKVFQGLSLLEARLKSVFTKH 160
Query: 174 A-----------HPVEYPSVVIIPDSIAV 191
P E+ + +P + V
Sbjct: 161 GLEKMTPIGDKYDPHEHELICHMPAGVGV 189
>sp|Q07US4|GRPE_RHOP5 Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE
PE=3 SV=1
Length = 207
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 60/88 (68%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L ++ ++ DK R LA+ EN R+R +++ ++++YG+ +F +D+L+IAD L A +
Sbjct: 37 VELLAKEAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALD 96
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTDGNL 170
+VP E ++ P LK+L +G+ +T+ +L
Sbjct: 97 AVPAEARANAEPGLKALIDGVELTERSL 124
>sp|Q3SW78|GRPE_NITWN Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=grpE PE=3 SV=1
Length = 197
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 52 DSDSTASSSSTESTSNVDPKI------KEELEDLKKQIEALNEKNSDLLDKYKRALADGE 105
DSD + S E + V+P + ++ ED ++ALN++ ++ D+ R LA+ E
Sbjct: 3 DSDGK-TDKSGEPAAEVEPVVSKPYVMPDDPED--DALDALNKQLAEAKDRTLRTLAEME 59
Query: 106 NARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLM 165
N R+R +++ +++ YGI F +D+L+IAD L A ++VP + +P LK+L EG+ +
Sbjct: 60 NLRKRTAREVSDARTYGISGFARDVLEIADNLQRALDAVPADARAAPDPGLKALIEGVEL 119
Query: 166 TDGNL 170
T+ +L
Sbjct: 120 TERSL 124
>sp|A4YJR1|GRPE_BRASO Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3
SV=1
Length = 206
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 95 DKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP 154
DK R LA+ EN R+R +++ ++++YGI F +D+LDIAD L A ++VP E +++
Sbjct: 49 DKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAVPAETRANADA 108
Query: 155 HLKSLYEGLLMTDGNL 170
LKSL EG+ +T+ +L
Sbjct: 109 GLKSLIEGVELTERSL 124
>sp|Q6G1E4|GRPE_BARQU Protein GrpE OS=Bartonella quintana (strain Toulouse) GN=grpE PE=3
SV=1
Length = 220
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 71 KIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDL 130
++KEE ++ + AL ++N +L D+ R +AD EN R+R + + ++K Y I +F +D+
Sbjct: 45 EVKEENNEVSDPLAALQDENKELKDQLLRLVADMENLRRRTARDVADAKAYSIANFARDM 104
Query: 131 LDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTD----GNLKKHAHPVEYP 180
L ++D L+ A E++P E K+++ LK+L EG+ MT+ L++H YP
Sbjct: 105 LSVSDNLNRALEAIP-EGAKENDAGLKTLAEGVEMTERAMIAALERHGVQKIYP 157
>sp|B2IDD9|GRPE_BEII9 Protein GrpE OS=Beijerinckia indica subsp. indica (strain ATCC 9039
/ DSM 1715 / NCIB 8712) GN=grpE PE=3 SV=1
Length = 201
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L +N+ L DK R AD EN R+R K++ ++KLYG+ SF +D+L AD L A E
Sbjct: 45 LENLQLENAGLKDKVLRTYADMENLRRRSEKEVADAKLYGVTSFARDMLTFADNLHRAIE 104
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTD 167
S+P E + + LK+ EG+ +T+
Sbjct: 105 SLPAEAKQAVDGPLKTFVEGIELTE 129
>sp|Q2J322|GRPE_RHOP2 Protein GrpE OS=Rhodopseudomonas palustris (strain HaA2) GN=grpE
PE=3 SV=1
Length = 206
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%)
Query: 84 EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
EAL ++ ++ DK R LA+ EN R+R K++ +++ YG+ +F +D+L+IAD L A ++
Sbjct: 39 EALIKEAAEARDKMLRTLAEMENLRRRTQKEVADARTYGVSAFARDVLEIADNLQRALDA 98
Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNL 170
VP E +++ LK L EG+ +T+ +L
Sbjct: 99 VPAEARANADAGLKGLIEGVELTERSL 125
>sp|Q13E58|GRPE_RHOPS Protein GrpE OS=Rhodopseudomonas palustris (strain BisB5) GN=grpE
PE=3 SV=1
Length = 206
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 84 EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
EAL + ++ DK R LA+ EN R+R K++ +++ YG+ +F +D+L+IAD L A ++
Sbjct: 38 EALVREAAEARDKMLRTLAEMENLRRRTAKEVADARTYGVSAFARDVLEIADNLQRALDA 97
Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNL 170
VP E +++ LK L EG+ +T+ +L
Sbjct: 98 VPAEARANADAGLKGLIEGVELTERSL 124
>sp|Q6G563|GRPE_BARHE Protein GrpE OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=grpE PE=3 SV=1
Length = 220
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 33 KFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSD 92
KF + EN ++ S +D A + D +K E L + AL ++N +
Sbjct: 7 KFTDASFENCDLKNPSDRDALKQAADKFLKAHAAEADADVKGGGEALVDPLAALQDENKE 66
Query: 93 LLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDS 152
L D+ R AD EN R+R + + ++K Y I +F +D+L ++D L+ A +++P E K++
Sbjct: 67 LKDQLLRLAADMENLRRRTARDVADAKAYSIANFARDMLSVSDNLNRALDAIP-EGAKEN 125
Query: 153 NPHLKSLYEGLLMTD----GNLKKHA----HP 176
+ LK+L EG+ MT+ L++H HP
Sbjct: 126 DAGLKTLAEGVEMTERAMIAALERHGVQKIHP 157
>sp|Q79V15|GRPE_BRAJA Protein GrpE OS=Bradyrhizobium japonicum (strain USDA 110) GN=grpE
PE=3 SV=1
Length = 201
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L ++ ++ D+ R LA+ EN R+R K++ +++LYGI F +D+LDIAD L A +
Sbjct: 35 VELLQKEAAEARDRMLRTLAEMENLRKRTTKEVADARLYGITGFARDVLDIADNLQRALD 94
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTDGN----LKKHA 174
+VP E ++P L SL EG+ +T+ + L+KH
Sbjct: 95 AVPAEARAAADPGLTSLIEGVELTERSLLNALEKHG 130
>sp|Q9P5U4|GRPE_NEUCR GrpE protein homolog, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=mge-1 PE=3 SV=1
Length = 238
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 19/166 (11%)
Query: 18 LKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELE 77
+ S+I Q +A++ L S A E+E +K +D A E+ +E+
Sbjct: 25 IASQIFQMQAARTAAPQLRSAARWYSAEAEGEKK-ADEGAEQKEGET---------DEVA 74
Query: 78 DLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTL 137
LKKQ+EA + + + DK R +AD N ++R + ++++K + IQ F KDL++ D
Sbjct: 75 ALKKQLEAKDAEAREWKDKCLRTVADFRNLQERTARDVKQAKDFAIQKFAKDLVESVDNF 134
Query: 138 SLANESVPKEEVK--DSNPHLK---SLYEGLLMTD----GNLKKHA 174
A VP++++K + + HLK +LYEGL MT+ LKKH
Sbjct: 135 ERALSVVPQDKLKSEEQSEHLKDLVNLYEGLKMTESILLSTLKKHG 180
>sp|B8IJD7|GRPE_METNO Protein GrpE OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=grpE PE=3 SV=1
Length = 226
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 92 DLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD 151
DL +K RALAD EN R+R +++ +++ Y + +F +D+L++AD + A +SVP E+
Sbjct: 49 DLKNKLLRALADMENLRRRTEREVADARTYAVTNFARDMLNVADNVRRALDSVPVEDRAA 108
Query: 152 SNPHLKSLYEGLLMTDGNLKK 172
++ LK+L +G+ +T +L K
Sbjct: 109 ADGALKALLDGIELTGRDLAK 129
>sp|B9JZG5|GRPE_AGRVS Protein GrpE OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=grpE PE=3 SV=1
Length = 204
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 47 ESKKDDSDSTASSSSTESTSNVDPKIKEEL----EDLKKQ---IEALNEKNSDLLDKYKR 99
E+ K+ D+ A + ++P+++EE ED + AL +N++L D++ R
Sbjct: 4 ETAKNGPDAAADAQ-------IEPQVQEETNSTAEDAGQDNNPTAALQAENAELRDRFLR 56
Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL 159
A+ +N R+R + ++++K Y + +F +D+L ++D L A ++VP E +++ L +L
Sbjct: 57 LAAEMDNLRRRTERDVKDAKSYAVTAFARDMLAVSDNLRRAIDAVPAEAKEEAQAGLTAL 116
Query: 160 YEGLLMTD----GNLKKHA 174
EG+ MT+ L++H
Sbjct: 117 IEGVEMTERAMLSTLERHG 135
>sp|A1TLI0|GRPE_ACIAC Protein GrpE OS=Acidovorax citrulli (strain AAC00-1) GN=grpE PE=3
SV=1
Length = 189
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 54 DSTASSSSTESTSNVDPKIK----EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQ 109
++ A++S ++S V+ + +EL L+ ++ L K++DL D++ RA A+ ENAR+
Sbjct: 11 NAAATASPSDSPEAVEATMAAHAADELGRLQNELAELKAKSADLADQFLRAKAEAENARR 70
Query: 110 RFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGN 169
R ++++ +++ +GI+SF + LL +AD+L+ A +KD+ ++ L EG TD
Sbjct: 71 RADEEVSKARKFGIESFAESLLPVADSLTAAL------AIKDAT--IEQLREG---TDAT 119
Query: 170 LKKHAHPVEYPSVVII 185
L++ +E V+ I
Sbjct: 120 LRQLTSALERNKVLAI 135
>sp|A9ILE9|GRPE_BART1 Protein GrpE OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=grpE PE=3 SV=1
Length = 222
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 71/115 (61%), Gaps = 12/115 (10%)
Query: 73 KEELEDLKKQIE---ALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKD 129
+E++E+ K+++ +L ++N +L ++ R AD EN R+R + + +++ Y I +F +D
Sbjct: 43 REDVEEESKEVDPLASLQDENKELKNQLLRLAADMENLRRRTARDVADARAYSIANFARD 102
Query: 130 LLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTD----GNLKKHA----HP 176
+L ++D L+ A E++P E ++S+ LKSL EG+ MT+ L++H HP
Sbjct: 103 MLSVSDNLNRALEAIP-EGARESDAGLKSLAEGVEMTERAMMAALERHGVQKIHP 156
>sp|A1UUC9|GRPE_BARBK Protein GrpE OS=Bartonella bacilliformis (strain ATCC 35685 /
KC583) GN=grpE PE=3 SV=1
Length = 222
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLL 131
++EE + + L ++N +L D++ R AD EN R+R + + ++K+Y I +F +D+L
Sbjct: 48 VEEEKNESTDLLATLQDENKELKDQFLRLAADMENLRRRTIRDVADAKIYSIANFARDML 107
Query: 132 DIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTD 167
++D L+ A E++P + ++S+ +LK L EG+ MT+
Sbjct: 108 SVSDNLNRALEAIPA-DARESDTNLKMLAEGVEMTE 142
>sp|Q0BX02|GRPE_HYPNA Protein GrpE OS=Hyphomonas neptunium (strain ATCC 15444) GN=grpE
PE=3 SV=1
Length = 188
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 53 SDSTASSSSTESTSNVDPKIKEELE-DLKKQIEALNEKNSDLLDKYKRALADGENARQRF 111
SD + E + V P+ + E E +++ I L + +D+ + R LAD +N R+R
Sbjct: 2 SDENKPGEAAELDAGVAPEAQPETELTVEELIIRLEAEKADMNGQILRLLADLDNTRKRA 61
Query: 112 NKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMT----D 167
++Q+ E+++Y I+ F DLL ++D LS A +++P E ++ K+L G+ MT +
Sbjct: 62 DRQVSEARIYAIEKFAADLLSVSDNLSRALDALPDSERENLTDAGKNLLGGIEMTAKELN 121
Query: 168 GNLKKHA-HPVEY-PSVVIIPDSIAVMERISLEQSLSIFLANFSVEW 212
L +H PV P V P+ + +I Q F W
Sbjct: 122 TALSRHGVVPVPAEPGAVFDPNVHQAVAQIPSPQPSGTIAQLFQPGW 168
>sp|P63188|GRPE_RHIRD Protein GrpE OS=Rhizobium radiobacter GN=grpE PE=3 SV=1
Length = 211
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L +N+DL DK+ R A+ +N R+R + ++++K Y + F +D+L ++D L A E
Sbjct: 37 VELLKAENADLRDKFLRLAAEMDNLRRRTERDVKDAKAYSLAGFARDMLAVSDNLRRALE 96
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTD----GNLKKHA 174
++P E + L L EG+ MT+ L++H
Sbjct: 97 AIPDELKTNGEAGLNGLIEGVEMTERSMLSTLERHG 132
>sp|P63187|GRPE_AGRT5 Protein GrpE OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=grpE PE=3 SV=1
Length = 211
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L +N+DL DK+ R A+ +N R+R + ++++K Y + F +D+L ++D L A E
Sbjct: 37 VELLKAENADLRDKFLRLAAEMDNLRRRTERDVKDAKAYSLAGFARDMLAVSDNLRRALE 96
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTD----GNLKKHA 174
++P E + L L EG+ MT+ L++H
Sbjct: 97 AIPDELKTNGEAGLNGLIEGVEMTERSMLSTLERHG 132
>sp|A5VNA6|GRPE_BRUO2 Protein GrpE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=grpE PE=3 SV=1
Length = 230
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+++ +I L N++L D+ R A+ EN R+R + +++++ Y I +F +D+L ++
Sbjct: 54 EVDETANRIAVLEADNTELKDQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVS 113
Query: 135 DTLSLANESVPKEEVK-DSNPHLKSLYEGLLMTD 167
D L A +++P + ++ DSN LKSL EG+ MT+
Sbjct: 114 DNLRRALDTIPADALEADSN--LKSLSEGVEMTE 145
>sp|B0CJ30|GRPE_BRUSI Protein GrpE OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=grpE PE=3 SV=1
Length = 230
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+++ +I L N++L D+ R A+ EN R+R + +++++ Y I +F +D+L ++
Sbjct: 54 EVDETANRIAVLEADNTELKDQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVS 113
Query: 135 DTLSLANESVPKEEVK-DSNPHLKSLYEGLLMTD 167
D L A +++P + ++ DSN LKSL EG+ MT+
Sbjct: 114 DNLRRALDAIPADALEADSN--LKSLSEGVEMTE 145
>sp|Q8G2Y6|GRPE_BRUSU Protein GrpE OS=Brucella suis biovar 1 (strain 1330) GN=grpE PE=3
SV=1
Length = 230
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+++ +I L N++L D+ R A+ EN R+R + +++++ Y I +F +D+L ++
Sbjct: 54 EVDETANRIAVLEADNTELKDQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVS 113
Query: 135 DTLSLANESVPKEEVK-DSNPHLKSLYEGLLMTD 167
D L A +++P + ++ DSN LKSL EG+ MT+
Sbjct: 114 DNLRRALDAIPADALEADSN--LKSLSEGVEMTE 145
>sp|A9M7B6|GRPE_BRUC2 Protein GrpE OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=grpE PE=3 SV=1
Length = 230
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+++ +I L N++L D+ R A+ EN R+R + +++++ Y I +F +D+L ++
Sbjct: 54 EVDETANRIAVLEADNTELKDQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVS 113
Query: 135 DTLSLANESVPKEEVK-DSNPHLKSLYEGLLMTD 167
D L A +++P + ++ DSN LKSL EG+ MT+
Sbjct: 114 DNLRRALDAIPADALEADSN--LKSLSEGVEMTE 145
>sp|Q11B39|GRPE_MESSB Protein GrpE OS=Mesorhizobium sp. (strain BNC1) GN=grpE PE=3 SV=1
Length = 222
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 86 LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
L ++N DL ++ R A+ EN R+R + + ++++YGI +F +D+L ++D L A ++V
Sbjct: 52 LAKENEDLKERALRLTAEMENLRKRTQRDVADARVYGIANFARDMLTVSDNLQRALQAVS 111
Query: 146 KEEVKDSNPHLKSLYEGLLMTD----GNLKKHA 174
+E ++ LK+L EG+ MT+ L++H
Sbjct: 112 EEARAQADSGLKALVEGVEMTERAMLATLERHG 144
>sp|B5ZMX0|GRPE_RHILW Protein GrpE OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=grpE PE=3 SV=1
Length = 210
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L +N +L D+Y R A+ +N R+R ++++++K Y + F +D+L ++D L A +
Sbjct: 40 LELLKAENGELRDRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRALD 99
Query: 143 SVPKEEVKD-SNPHLKSLYEGLLMTD 167
++P EVKD ++ L +L EG+ MT+
Sbjct: 100 AIPA-EVKDAADAGLSTLIEGVEMTE 124
>sp|A1WGK0|GRPE_VEREI Protein GrpE OS=Verminephrobacter eiseniae (strain EF01-2) GN=grpE
PE=3 SV=1
Length = 181
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Query: 51 DDSDSTASSSSTEST-SNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQ 109
D+S +T S+ + E + + +EL L+ ++ L K+++L D++ RA A+ ENAR+
Sbjct: 3 DNSPTTPSAPAPEEVEAAMAAHADDELARLQGELAELKAKSAELADQFLRAKAEAENARR 62
Query: 110 RFNKQLEESKLYGIQSFCKDLLDIADTLSLA---NESVPKEEVKDSNPHLKSLYEGL 163
R ++ +++ +GI+SF + LL +AD+L A E+ P++ + ++ L+ L L
Sbjct: 63 RAEDEVAKARKFGIESFAESLLPVADSLDAALAIKEATPQQLREGADATLRQLTSTL 119
>sp|A6U5E2|GRPE_SINMW Protein GrpE OS=Sinorhizobium medicae (strain WSM419) GN=grpE PE=3
SV=1
Length = 208
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 89 KNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEE 148
+N++L DKY R A+ +N R+R + ++++K Y + F +D+L ++D L A +++P +
Sbjct: 48 ENAELRDKYLRLAAEMDNLRRRTERDVKDAKSYSVAGFARDMLAVSDNLRRALDAIPADA 107
Query: 149 VKDSNPHLKSLYEGLLMTD 167
+ + LK+L EG+ MT+
Sbjct: 108 REAGDAGLKALIEGVEMTE 126
>sp|B3PZA4|GRPE_RHIE6 Protein GrpE OS=Rhizobium etli (strain CIAT 652) GN=grpE PE=3 SV=1
Length = 210
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 53/85 (62%)
Query: 83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE 142
+E L +NS+L D+Y R A+ +N R+R ++++++K Y + F +D+L ++D L A +
Sbjct: 40 LELLKAENSELRDRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRALD 99
Query: 143 SVPKEEVKDSNPHLKSLYEGLLMTD 167
++ E ++ L SL EG+ MT+
Sbjct: 100 AISPEAKATADAGLTSLIEGVEMTE 124
>sp|Q1RIX7|GRPE_RICBR Protein GrpE OS=Rickettsia bellii (strain RML369-C) GN=grpE PE=3
SV=1
Length = 176
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+ DLK QIE +L DK RA A+ +N R+R K +E++ Y I +F K+LL+++
Sbjct: 25 EIADLKAQIE-------ELKDKLIRASAEIDNTRKRLEKARDEARDYAITTFAKELLNVS 77
Query: 135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK--HAHPVE 178
D LS A E P D++ + ++ G+ MT L K H H +E
Sbjct: 78 DNLSRALEHKP----LDASVEVTNIIAGVQMTKDELDKVFHKHHIE 119
>sp|A8GW24|GRPE_RICB8 Protein GrpE OS=Rickettsia bellii (strain OSU 85-389) GN=grpE PE=3
SV=1
Length = 176
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E+ DLK QIE +L DK RA A+ +N R+R K +E++ Y I +F K+LL+++
Sbjct: 25 EIADLKAQIE-------ELKDKLIRASAEIDNTRKRLEKARDEARDYAITTFAKELLNVS 77
Query: 135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK--HAHPVE 178
D LS A E P D++ + ++ G+ MT L K H H +E
Sbjct: 78 DNLSRALEHKP----LDASVEVTNIIAGVQMTKDELDKVFHKHHIE 119
>sp|Q8YEV0|GRPE_BRUME Protein GrpE OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=grpE PE=3 SV=2
Length = 226
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 76 LEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIAD 135
+++ +I L N++L D+ R A+ EN R+R + +++++ Y I +F +D+L ++D
Sbjct: 51 VDETANRIAVLEADNTELKDQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSD 110
Query: 136 TLSLANESVPKEEVK-DSNPHLKSLYEGLLMTD 167
L A +++P + ++ DSN LKSL EG+ MT+
Sbjct: 111 NLRRALDAIPADALEADSN--LKSLSEGVEMTE 141
>sp|B6JCI1|GRPE_OLICO Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 /
DSM 1227 / OM5) GN=grpE PE=3 SV=1
Length = 200
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 58/89 (65%)
Query: 84 EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
EAL ++ ++ D+ R LA+ EN R+R +++ +++ YGI F +D+L+IAD L A ++
Sbjct: 43 EALVKEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDA 102
Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
VP E ++P L +L EG+ +T+ +L +
Sbjct: 103 VPAEARAAADPGLTALIEGVELTERSLHR 131
>sp|B9MDJ6|GRPE_ACIET Protein GrpE OS=Acidovorax ebreus (strain TPSY) GN=grpE PE=3 SV=1
Length = 178
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDI 133
+EL L+ ++ L K++DL D++ RA A+ ENAR+R ++ +++ +GI+SF + LL +
Sbjct: 24 DELNRLQGELAELKAKSADLADQFLRAKAEAENARRRAEDEVAKARKFGIESFAESLLPV 83
Query: 134 ADTL--SLANESVPKEEVKD-SNPHLKSLYEGL 163
D+L +LA E+ E++++ S+ L+ L L
Sbjct: 84 CDSLDAALAIENATAEQLREGSDATLRQLMSAL 116
>sp|A1WAR5|GRPE_ACISJ Protein GrpE OS=Acidovorax sp. (strain JS42) GN=grpE PE=3 SV=1
Length = 178
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDI 133
+EL L+ ++ L K++DL D++ RA A+ ENAR+R ++ +++ +GI+SF + LL +
Sbjct: 24 DELNRLQGELAELKAKSADLADQFLRAKAEAENARRRAEDEVAKARKFGIESFAESLLPV 83
Query: 134 ADTL--SLANESVPKEEVKD-SNPHLKSLYEGL 163
D+L +LA E+ E++++ S+ L+ L L
Sbjct: 84 CDSLDAALAIENATAEQLREGSDATLRQLMSAL 116
>sp|Q54QF9|GRPE_DICDI GrpE protein homolog, mitochondrial OS=Dictyostelium discoideum
GN=grpE PE=3 SV=1
Length = 213
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 102 ADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYE 161
AD EN R+ + E++K +GIQSF K+LL++ D L +A PKE++ D N LK L+E
Sbjct: 78 ADRENVRRFAKEDNEKAKKFGIQSFTKELLEVVDQLEMATNLFPKEKL-DENKELKDLHE 136
Query: 162 GLLMTD 167
G+ MT+
Sbjct: 137 GVKMTE 142
>sp|P0CAV1|GRPE_CAUCR Protein GrpE OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=grpE PE=3 SV=1
Length = 208
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
E +D ++IEAL + + L ++ R A+ EN ++R +++ +++ Y IQ F +DLL A
Sbjct: 14 EADDAAQEIEALKLEVAQLKEQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAA 73
Query: 135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLK 171
D L A PK+ ++P +K+ G+ MT+ L+
Sbjct: 74 DNLGRATAHSPKD---STDPAVKNFIIGVEMTEKELQ 107
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,025,775
Number of Sequences: 539616
Number of extensions: 3050855
Number of successful extensions: 28647
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 943
Number of HSP's that attempted gapping in prelim test: 25598
Number of HSP's gapped (non-prelim): 3672
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)