BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2068
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster
GN=Roe1 PE=2 SV=2
Length = 213
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VFKRHGLEP++P+ +KFDPN HEALF++E + E NTVV V+K+GYKL+ R IRPALVG+
Sbjct: 151 VFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=Pongo abelii GN=GRPEL1
PE=2 SV=1
Length = 217
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF +HGL +NP+G KFDP HEALF VEGKE TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213
Query: 95 SK 96
K
Sbjct: 214 VK 215
>sp|Q9HAV7|GRPE1_HUMAN GrpE protein homolog 1, mitochondrial OS=Homo sapiens GN=GRPEL1
PE=1 SV=2
Length = 217
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF +HGL +NP+G KFDP HEALF VEGKE TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213
Query: 95 SK 96
K
Sbjct: 214 VK 215
>sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=Bos taurus GN=GRPEL1 PE=1
SV=1
Length = 217
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF +HGL +NPLG KFDP HEALF VEGKE TV +V+K+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLNPLGAKFDPYEHEALFHTPVEGKEPGTVALVNKVGYKLHGRTLRPALVGV 213
Query: 95 SKS 97
K
Sbjct: 214 VKG 216
>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1
PE=1 SV=1
Length = 217
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF +HGL ++P+G KFDP HEALF VEGKE TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213
Query: 95 SKS 97
K
Sbjct: 214 VKD 216
>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus
GN=Grpel1 PE=1 SV=2
Length = 217
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF +HGL ++P+G KFDP HEALF VEGKE TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213
Query: 95 SKS 97
K
Sbjct: 214 VKD 216
>sp|Q6CRQ1|GRPE_KLULA GrpE protein homolog, mitochondrial OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=mge1 PE=3 SV=1
Length = 243
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 42/62 (67%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
K+HG+E +NP+GE FDPN HEA FE KE TV V +IGY L +RVIRPA VGI
Sbjct: 178 TLKKHGIEQLNPIGESFDPNKHEATFELPQPDKEPGTVFHVQQIGYTLNDRVIRPAKVGI 237
Query: 95 SK 96
K
Sbjct: 238 VK 239
>sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MGE1 PE=1 SV=1
Length = 228
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N ++HG+E ++PLGE FDPN HEA FE KE TV V ++G+ L +RVIRPA VG
Sbjct: 162 NTLRKHGIEKLDPLGEPFDPNKHEATFELPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVG 221
Query: 94 ISK 96
I K
Sbjct: 222 IVK 224
>sp|A6WVA7|GRPE_OCHA4 Protein GrpE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=grpE PE=3 SV=1
Length = 228
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P GEKFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGEKFDPNFHQAMFEVPNPDLPNNTVVQVVQDGYAIGDRVLRPAMVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|Q5GSA3|GRPE_WOLTR Protein GrpE OS=Wolbachia sp. subsp. Brugia malayi (strain TRS)
GN=grpE PE=3 SV=1
Length = 182
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N K+HG+E I+P+GE FD N H+A+ E+E K+ T+V V + GY + NR++RPA+V
Sbjct: 117 NDLKKHGIEEIDPIGELFDSNLHQAVVEREDNEKKTGTIVEVLQTGYTIKNRLLRPAMVI 176
Query: 94 ISK 96
ISK
Sbjct: 177 ISK 179
>sp|Q98GQ5|GRPE_RHILO Protein GrpE OS=Rhizobium loti (strain MAFF303099) GN=grpE PE=3
SV=1
Length = 210
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG++ + P GEKFDPNFH+A+FE ANTVV V + GY + RV+RPA+VG
Sbjct: 124 SALERHGVKKLAPEGEKFDPNFHQAMFEVPNPDVPANTVVQVVQPGYSIGERVLRPAMVG 183
Query: 94 ISKS 97
++K
Sbjct: 184 VAKG 187
>sp|Q6FPH2|GRPE_CANGA GrpE protein homolog, mitochondrial OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=mge1 PE=3 SV=1
Length = 231
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
K++G+E ++PLGE+FDPN HEA FE KE TV V ++GY L RVIRPA VG+
Sbjct: 168 TLKKYGIEKLDPLGERFDPNKHEATFELAQPDKEPGTVFHVQQLGYTLNERVIRPAKVGV 227
Query: 95 SK 96
K
Sbjct: 228 VK 229
>sp|Q8YEV0|GRPE_BRUME Protein GrpE OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=grpE PE=3 SV=2
Length = 226
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 147 ALERHGVKKLEPEGQKFDPNFHQAMFEVPNPDLPNNTVVQVVQAGYAIGDRVLRPAMVGV 206
Query: 95 SK 96
SK
Sbjct: 207 SK 208
>sp|B0CJ30|GRPE_BRUSI Protein GrpE OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=grpE PE=3 SV=1
Length = 230
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGQKFDPNFHQAMFEVPNPDLPNNTVVQVVQAGYAIGDRVLRPAMVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|A5VNA6|GRPE_BRUO2 Protein GrpE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=grpE PE=3 SV=1
Length = 230
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGQKFDPNFHQAMFEVPNPDLPNNTVVQVVQAGYAIGDRVLRPAMVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|Q8G2Y6|GRPE_BRUSU Protein GrpE OS=Brucella suis biovar 1 (strain 1330) GN=grpE PE=3
SV=1
Length = 230
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGQKFDPNFHQAMFEVPNPDLPNNTVVQVVQAGYAIGDRVLRPAMVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|A9M7B6|GRPE_BRUC2 Protein GrpE OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=grpE PE=3 SV=1
Length = 230
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ + P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGQKFDPNFHQAMFEVPNPDLPNNTVVQVVQAGYAIGDRVLRPAMVGV 210
Query: 95 SK 96
SK
Sbjct: 211 SK 212
>sp|Q92SK0|GRPE_RHIME Protein GrpE OS=Rhizobium meliloti (strain 1021) GN=grpE PE=3 SV=1
Length = 208
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ ++P G+KFDPNFH+A+FE NTVV V + GY + RV+RPA+VG+
Sbjct: 132 ALERHGVKQLDPTGQKFDPNFHQAMFEVPNTEVPNNTVVQVVQAGYTIGERVLRPAMVGV 191
Query: 95 SK 96
+K
Sbjct: 192 AK 193
>sp|Q6BTP9|GRPE_DEBHA GrpE protein homolog, mitochondrial OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=mge1 PE=3 SV=1
Length = 243
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 34 NVFK----RHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRP 89
NVF+ RHG+E ++P+GE+FDPN HEA FE KE TV V + GY L +RV+RP
Sbjct: 173 NVFEKTLARHGIEKVDPIGEQFDPNQHEATFEIAQPDKEPGTVFHVQQNGYTLNSRVLRP 232
Query: 90 ALVGISKS 97
A VG+ K
Sbjct: 233 AKVGVVKD 240
>sp|C0R3M5|GRPE_WOLWR Protein GrpE OS=Wolbachia sp. subsp. Drosophila simulans (strain
wRi) GN=grpE PE=3 SV=1
Length = 189
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N K+HG+E ++PLGE FD N H+A+ E+E K+ T+V V + GY + NR++RPA+V
Sbjct: 119 NDLKKHGIEEVDPLGELFDSNLHQAVVEREDNEKKPGTIVEVLQTGYTIKNRLLRPAMVI 178
Query: 94 ISK 96
+SK
Sbjct: 179 LSK 181
>sp|Q73GX9|GRPE_WOLPM Protein GrpE OS=Wolbachia pipientis wMel GN=grpE PE=3 SV=1
Length = 189
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N K+HG++ ++PLGE FD N H+A+ E+E KE T+V V + GY + NR++RPA+V
Sbjct: 119 NDLKKHGIKEVDPLGELFDSNLHQAVVEREDNEKEPGTIVEVLQTGYTIKNRLLRPAMVI 178
Query: 94 ISK 96
+SK
Sbjct: 179 LSK 181
>sp|B9JZG5|GRPE_AGRVS Protein GrpE OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=grpE PE=3 SV=1
Length = 204
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG+ I P G+KFDPNFH+A+FE NTVV V + GY + +RV+RPA+VG
Sbjct: 129 STLERHGVRKIEPEGQKFDPNFHQAMFEIPNPQVPNNTVVQVVQPGYTIGDRVLRPAMVG 188
Query: 94 ISK 96
++K
Sbjct: 189 VAK 191
>sp|A6U5E2|GRPE_SINMW Protein GrpE OS=Sinorhizobium medicae (strain WSM419) GN=grpE PE=3
SV=1
Length = 208
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ ++P G+KFDPNFH+A+FE NTVV V + GY + RV+RPA+VG+
Sbjct: 132 ALERHGVKQLDPTGQKFDPNFHQAMFEVPNPEVPNNTVVQVVQAGYTIGERVLRPAMVGV 191
Query: 95 SK 96
+K
Sbjct: 192 AK 193
>sp|A1WX32|GRPE_HALHL Protein GrpE OS=Halorhodospira halophila (strain DSM 244 / SL1)
GN=grpE PE=3 SV=1
Length = 240
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
VF+R +E INP GE+F+P++HEA+ Q + +E NTV+ V + GY+L +R++RPALV +
Sbjct: 163 VFERFEIEEINPQGERFNPDYHEAMAAQPSDEQEPNTVLQVVQKGYRLQDRLLRPALVVV 222
Query: 95 SK 96
+K
Sbjct: 223 AK 224
>sp|B3CPX8|GRPE_WOLPP Protein GrpE OS=Wolbachia pipientis subsp. Culex pipiens (strain
wPip) GN=grpE PE=3 SV=1
Length = 186
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 36 FKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGIS 95
K+HG+E I+P+G FD N H+A+ E+E KE T+V V + GY + NR++RPA+V +S
Sbjct: 118 LKKHGIEEIDPIGNSFDSNLHQAVVEREDNEKEPGTIVEVLQTGYTIKNRLLRPAMVILS 177
Query: 96 K 96
K
Sbjct: 178 K 178
>sp|Q1MMC9|GRPE_RHIL3 Protein GrpE OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=grpE PE=3 SV=1
Length = 210
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 3 FSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQ 62
S + +D+ L+ L R + +RHG+ + P+G+KFDPNFH+A+FE
Sbjct: 101 ISPETKATADAGLSTLIEGVEMTERAML---SALERHGVRKLEPVGQKFDPNFHQAMFEV 157
Query: 63 EVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
NTVV V + G+ + RV+RPA+VG++K
Sbjct: 158 PNPDVPNNTVVQVVQAGFTIGERVLRPAMVGVAK 191
>sp|Q11B39|GRPE_MESSB Protein GrpE OS=Mesorhizobium sp. (strain BNC1) GN=grpE PE=3 SV=1
Length = 222
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 3 FSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQ 62
S + +DS L L R +RHG++ ++P GEKFDP+FH+A+FE
Sbjct: 110 VSEEARAQADSGLKALVEGVEMTERAMLA---TLERHGVKRVDPNGEKFDPHFHQAMFEV 166
Query: 63 EVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS 97
NTVV V + GY + +RV+RPA+VG++K
Sbjct: 167 PNADVPNNTVVQVVQPGYVIGDRVLRPAMVGVAKG 201
>sp|B5ZMX0|GRPE_RHILW Protein GrpE OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=grpE PE=3 SV=1
Length = 210
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG+ + P+G+KFDPNFH+A+FE NTVV V + G+ + RV+RPA+VG
Sbjct: 129 SALERHGVRKLEPVGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGFSIGERVLRPAMVG 188
Query: 94 ISK 96
++K
Sbjct: 189 VAK 191
>sp|A1K4C6|GRPE_AZOSB Protein GrpE OS=Azoarcus sp. (strain BH72) GN=grpE PE=3 SV=1
Length = 188
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Query: 10 MSDSYLAQLTIDYSFVCRMK------WKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQ 62
+ DS A L ++ V +++ KQ + F+ GL NPLG+KFDPN H+A+
Sbjct: 92 VKDSLEAALAVENQTVEKLREGVELTLKQLVSAFEGAGLAEENPLGQKFDPNKHQAISAI 151
Query: 63 EVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS 97
E EG E NTV+ V + GY L+ RV+RPALV +SK+
Sbjct: 152 EAEG-EPNTVINVLQKGYLLHERVVRPALVVVSKA 185
>sp|B3PZA4|GRPE_RHIE6 Protein GrpE OS=Rhizobium etli (strain CIAT 652) GN=grpE PE=3 SV=1
Length = 210
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG+ + P+G+KFDPNFH+A+FE NTVV V + G+ + RV+RPA+VG
Sbjct: 129 SALERHGVRKLEPVGQKFDPNFHQAMFEVPNSEVPNNTVVQVVQAGFTIGERVLRPAMVG 188
Query: 94 ISK 96
++K
Sbjct: 189 VAK 191
>sp|Q2VYM5|GRPE_MAGSA Protein GrpE OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=grpE PE=3 SV=1
Length = 203
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
F+R+G++ + GE+FDPN H+A+ E E + TVV+V + GY L++R++RPALVG+
Sbjct: 128 TFERYGIKLVAAQGERFDPNLHQAMMEMEDPSQIEGTVVLVMQAGYTLHDRLLRPALVGV 187
Query: 95 SK 96
+K
Sbjct: 188 AK 189
>sp|Q2KD99|GRPE_RHIEC Protein GrpE OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=grpE
PE=3 SV=1
Length = 211
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG+ + P+G+KFDPNFH+A+FE NTVV V + G+ + RV+RPA+VG
Sbjct: 130 SALERHGVRKLEPVGQKFDPNFHQAMFEVPNSEVPNNTVVQVVQAGFTIGERVLRPAMVG 189
Query: 94 ISK 96
++K
Sbjct: 190 VAK 192
>sp|B8IJD7|GRPE_METNO Protein GrpE OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=grpE PE=3 SV=1
Length = 226
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 33 ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALV 92
A +RHG+ + P G++FDPN H+A+FE TVV V + GY + +RV+RPALV
Sbjct: 128 AKTLERHGVRAVEPQGQRFDPNLHQAMFEVPNPDVANGTVVQVVQTGYVIGDRVLRPALV 187
Query: 93 GISKS 97
G+SK
Sbjct: 188 GVSKG 192
>sp|Q5NRL4|GRPE_ZYMMO Protein GrpE OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821
/ ZM4 / CP4) GN=grpE PE=3 SV=1
Length = 190
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N+ +RHG++ + +G+K DPN H+A+ E E E E TVV + GY +++R++RPA+VG
Sbjct: 120 NILQRHGIKRVESVGQKLDPNLHQAMIEIESEKPEG-TVVQEMQAGYTIHDRLLRPAMVG 178
Query: 94 ISKS 97
++K+
Sbjct: 179 VAKA 182
>sp|C5BQ34|GRPE_TERTT Protein GrpE OS=Teredinibacter turnerae (strain ATCC 39867 / T7901)
GN=grpE PE=3 SV=1
Length = 190
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ K+HG+E +NP GE F+P H+A+ E E NTV+ V ++GY L+ R++RPA+V
Sbjct: 128 DSLKKHGVESVNPEGEPFNPELHQAMTAVENPDAEPNTVINVYQVGYTLHGRLVRPAMVV 187
Query: 94 ISK 96
+SK
Sbjct: 188 VSK 190
>sp|Q54QF9|GRPE_DICDI GrpE protein homolog, mitochondrial OS=Dictyostelium discoideum
GN=grpE PE=3 SV=1
Length = 213
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+ GL+ NP+GEKFD N H A+FE KE NTV V K GYKL++R++RPA+VG+
Sbjct: 148 IMGNQGLQRFNPIGEKFDFNNHHAIFELNDPTKENNTVGHVVKQGYKLHDRLVRPAMVGV 207
Query: 95 SK 96
+K
Sbjct: 208 NK 209
>sp|Q5P1H4|GRPE_AROAE Protein GrpE OS=Aromatoleum aromaticum (strain EbN1) GN=grpE PE=3
SV=1
Length = 192
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 12 DSYLAQLTIDYSFV------CRMKWKQANV-FKRHGLEPINPLGEKFDPNFHEALFEQEV 64
DS A LTI+ + + KQ N F+ GL +P G+KFDPN H+A+ E
Sbjct: 98 DSLEAALTIEKQTLESLREGVELTLKQLNAAFQNGGLTEEDPAGQKFDPNKHQAISAIEA 157
Query: 65 EGKEANTVVVVSKIGYKLYNRVIRPALVGISKS 97
EG E NTV+ V + GY L+ RVIRPA+V +SK+
Sbjct: 158 EG-EPNTVLNVLQKGYLLHGRVIRPAMVMVSKA 189
>sp|B8ET77|GRPE_METSB Protein GrpE OS=Methylocella silvestris (strain BL2 / DSM 15510 /
NCIMB 13906) GN=grpE PE=3 SV=1
Length = 187
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 33 ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALV 92
A+ +R G++ I+P G+KFDPN HEALFEQ E TV V + GY + RV+RPA V
Sbjct: 119 ASRLERFGVKKIDPAGQKFDPNLHEALFEQPDESVPNGTVTQVIEPGYVIGERVLRPAKV 178
Query: 93 GISKS 97
G+S+
Sbjct: 179 GVSRG 183
>sp|Q79V15|GRPE_BRAJA Protein GrpE OS=Bradyrhizobium japonicum (strain USDA 110) GN=grpE
PE=3 SV=1
Length = 201
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
N ++HG++ +P G+KFDPNF +A+FE A TVV V + GY + RV+RPALVG
Sbjct: 124 NALEKHGVKKFDPQGQKFDPNFQQAMFEVPDASVPAGTVVQVMQAGYTIGERVLRPALVG 183
Query: 94 I 94
+
Sbjct: 184 V 184
>sp|Q5KWZ6|GRPE_GEOKA Protein GrpE OS=Geobacillus kaustophilus (strain HTA426) GN=grpE
PE=1 SV=1
Length = 213
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ K+ G+E I +G+ FDP H+A+ + E EG E NTVV + GYKL +RV+RPA+V
Sbjct: 151 DALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPAMVK 210
Query: 94 ISK 96
+S+
Sbjct: 211 VSQ 213
>sp|P63188|GRPE_RHIRD Protein GrpE OS=Rhizobium radiobacter GN=grpE PE=3 SV=1
Length = 211
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG++ I+ G+KFDPNFH+A+FE NTV+ V + G+ + +RV+RPA+VG
Sbjct: 126 STLERHGVKKIDAEGQKFDPNFHQAMFEVPNTAVPNNTVLQVIQAGFTIGDRVLRPAMVG 185
Query: 94 ISK 96
++K
Sbjct: 186 VAK 188
>sp|P63187|GRPE_AGRT5 Protein GrpE OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=grpE PE=3 SV=1
Length = 211
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+ +RHG++ I+ G+KFDPNFH+A+FE NTV+ V + G+ + +RV+RPA+VG
Sbjct: 126 STLERHGVKKIDAEGQKFDPNFHQAMFEVPNTAVPNNTVLQVIQAGFTIGDRVLRPAMVG 185
Query: 94 ISK 96
++K
Sbjct: 186 VAK 188
>sp|Q6G563|GRPE_BARHE Protein GrpE OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=grpE PE=3 SV=1
Length = 220
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ I+P G+KFDP+FH+A+FE NTV V + GY + RV+RPA+VG+
Sbjct: 146 ALERHGVQKIHPEGQKFDPHFHQAMFEIPNSDVPDNTVQQVVQAGYIIGERVLRPAIVGV 205
Query: 95 SK 96
+K
Sbjct: 206 AK 207
>sp|Q75C01|GRPE_ASHGO GrpE protein homolog, mitochondrial OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=mge1
PE=3 SV=1
Length = 212
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 37/60 (61%)
Query: 38 RHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS 97
+HG+ PI+ LG+ FDPN HEA FE K TV V + GY L RVIRPA VG+ K
Sbjct: 150 KHGIAPIDALGQPFDPNLHEATFELPQPDKTPGTVFHVQQPGYTLNGRVIRPAKVGVVKD 209
>sp|Q3SIN5|GRPE_THIDA Protein GrpE OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=grpE PE=3 SV=1
Length = 173
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKE-ANTVVVVSKIGYKLYNRVIRPALVG 93
VF + L I PLGEKFDP+ H+A+ Q VE ++ ANTVV V + GY+L++R +RPALV
Sbjct: 110 VFGKFNLHDIEPLGEKFDPHLHQAI--QVVESEQPANTVVTVLQKGYRLHDRTLRPALVM 167
Query: 94 ISK 96
++K
Sbjct: 168 VAK 170
>sp|Q0AIY2|GRPE_NITEC Protein GrpE OS=Nitrosomonas eutropha (strain C91) GN=grpE PE=3
SV=1
Length = 196
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 3 FSYQKNWMSDSYLAQLTIDYSFVCRMK------WKQ-ANVFKRHGLEPINPLGEKFDPNF 55
F+ Q + DS A L ++ S + +K KQ A VF++ + INP GEKFDP+
Sbjct: 93 FATQLLAVMDSLDAALAVENSTIESLKDGVELTRKQLAAVFEKFNIHTINPQGEKFDPHQ 152
Query: 56 HEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS 97
HEA+ E + NTV V + GY L+ RVIRPA+V +SK+
Sbjct: 153 HEAMCTVESDIP-PNTVTQVMQKGYVLHERVIRPAMVAVSKA 193
>sp|Q1H3B7|GRPE_METFK Protein GrpE OS=Methylobacillus flagellatus (strain KT / ATCC 51484
/ DSM 6875) GN=grpE PE=3 SV=1
Length = 184
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 3 FSYQKNWMSDSYLAQLTI------DYSFVCRMKWKQ-ANVFKRHGLEPINPLGEKFDPNF 55
FS + + DS A L + Y + KQ VF++ + INP+GEKFDPN
Sbjct: 85 FSSELLAVKDSLDAALNVGSATLESYRDGVELTAKQLTAVFEKFSIVEINPVGEKFDPNK 144
Query: 56 HEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
H+A+ E E E+NTVV V + GY L +RV+RPALV ++K
Sbjct: 145 HQAIGTVESEA-ESNTVVNVLQKGYTLNDRVLRPALVMVAK 184
>sp|A9ILE9|GRPE_BART1 Protein GrpE OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=grpE PE=3 SV=1
Length = 222
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
+RHG++ I+P G+KFDP+FH+A+FE NTV V + GY + RV+RPA+VG+
Sbjct: 145 ALERHGVQKIHPEGQKFDPHFHQAMFEIPNADVPDNTVQQVVQAGYIIGERVLRPAIVGV 204
Query: 95 SK 96
+K
Sbjct: 205 AK 206
>sp|Q87RX5|GRPE_VIBPA Protein GrpE OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=grpE PE=3 SV=1
Length = 198
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
+V + GL+ INP GE F+P FH+A+ QE E+NTV+ V + GY+L RVIRPA+V
Sbjct: 136 DVVAKFGLKEINPEGETFNPEFHQAMSIQESPDHESNTVMFVMQKGYELNGRVIRPAMVM 195
Query: 94 ISK 96
++K
Sbjct: 196 VAK 198
>sp|Q3IYI4|GRPE_RHOS4 Protein GrpE OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1
/ NCIB 8253 / DSM 158) GN=grpE PE=3 SV=1
Length = 189
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 34 NVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALV 92
NV +HG+ PI P +G+ FDP H+A+FE V G +A ++ V G+ +++R++RPA V
Sbjct: 122 NVMNKHGVRPITPQVGDTFDPQQHQAMFEAPVPGTKAGQIIQVMTEGFMIHDRLLRPAQV 181
Query: 93 GIS 95
G+S
Sbjct: 182 GVS 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,426,162
Number of Sequences: 539616
Number of extensions: 1305426
Number of successful extensions: 3260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2627
Number of HSP's gapped (non-prelim): 576
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)